BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001578
         (1050 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255567975|ref|XP_002524965.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
 gi|223535800|gb|EEF37462.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
          Length = 1101

 Score = 1385 bits (3584), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 705/979 (72%), Positives = 806/979 (82%), Gaps = 24/979 (2%)

Query: 33  MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
           MASAI+ R+ELAKLC+ R+WSKAIR+LDSLL+QS  IQDICNRAFCYSQLELHKHVI+DC
Sbjct: 1   MASAISERVELAKLCASRDWSKAIRVLDSLLSQSCTIQDICNRAFCYSQLELHKHVIKDC 60

Query: 93  DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
           DKALQLDP LLQAYILKG AFS+LGRK++AL VW++GYEHAL QSADLKQ LELEELL  
Sbjct: 61  DKALQLDPMLLQAYILKGRAFSSLGRKDDALLVWQQGYEHALRQSADLKQLLELEELLKF 120

Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK-SDICDSSSQSRDVSETC 211
           AKQ+R++     V+ S + +  +E   + N K +E S+N ++ SDI +S  +S D SE C
Sbjct: 121 AKQERNIGLRDHVTES-TPMNTTEFATHTNGKSNEASKNRDQLSDISNSCRESGDGSEIC 179

Query: 212 SKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDAS 271
           SK   + D  N   D+A G S + + +   H+NGK  +V  NH+   D SK  + SRD  
Sbjct: 180 SKFGGNFDAMNVIRDKAGGESPITIPECRPHMNGKSDDVCTNHDKLGDKSKLHNESRDTY 239

Query: 272 EINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKS 331
           +I   S D+  I N    KA  + +  +  NGTH+  DK+S DS S N  +  S   SKS
Sbjct: 240 KICCNSGDNCAIQNYLSRKAEGDVKTDK--NGTHNFIDKIS-DSESCNVLSDTSVPSSKS 296

Query: 332 SISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQ 391
           S     S D+++ R KLS K D+  E  +E K++KKF VTRISK+KSI+VDFRLSRGIAQ
Sbjct: 297 STISISSGDTSDIRVKLSNKTDIPNEAGDETKKSKKFSVTRISKTKSITVDFRLSRGIAQ 356

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           VNEGKYASAISIFDQIL EDP YPEALIGRGTA AFQRELEAAI+DF++AIQSNP AGEA
Sbjct: 357 VNEGKYASAISIFDQILTEDPTYPEALIGRGTAHAFQRELEAAIADFSKAIQSNPLAGEA 416

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           WKRRGQARAALGES+EAI DL+KALEFEPNSADILHERGIVNFKFKDF+AAV+DLSACVK
Sbjct: 417 WKRRGQARAALGESIEAIHDLTKALEFEPNSADILHERGIVNFKFKDFDAAVQDLSACVK 476

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           LDK+NKSAYTYLGLALSS GEYKKAEEAHLK+IQLDR+FLE W HLTQFYQDLAN  KA 
Sbjct: 477 LDKDNKSAYTYLGLALSSTGEYKKAEEAHLKSIQLDRSFLEGWAHLTQFYQDLANLTKAF 536

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           EC++QVL ID RF+KAYHL GLLLHG+G+H+KAIK+LS GL I+ SNIECLYLRASCYHA
Sbjct: 537 ECIKQVLQIDARFAKAYHLHGLLLHGMGEHRKAIKELSLGLSIENSNIECLYLRASCYHA 596

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           IGEY EA+KDYDA LD+ELDSMEKFVLQCLAFYQKE+ALYTASKINSEFCWFDIDGDIDP
Sbjct: 597 IGEYGEAVKDYDATLDMELDSMEKFVLQCLAFYQKELALYTASKINSEFCWFDIDGDIDP 656

Query: 692 LFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIGKKIQ 751
           LFKEYWCKRLHPKNVCEKVYRQPPLRDSLK+GKLR+QDF +TKQKTALL+ ADSIGKKIQ
Sbjct: 657 LFKEYWCKRLHPKNVCEKVYRQPPLRDSLKRGKLRKQDFVITKQKTALLMAADSIGKKIQ 716

Query: 752 YDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINI 811
           YDCPGFL NRRQHRMAGLAAIEIAQKVSK WRSLQAEWK+SN+S SK GK+ RR  RIN+
Sbjct: 717 YDCPGFLPNRRQHRMAGLAAIEIAQKVSKAWRSLQAEWKHSNKSMSKYGKKTRR--RINM 774

Query: 812 ASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVN 871
            SQNRGGAGCS++SS  ++SYGI+EERSSG   +SWQDVY+LAVKWRQISEPCDPVVWVN
Sbjct: 775 PSQNRGGAGCSSNSSETSTSYGISEERSSGRHMISWQDVYSLAVKWRQISEPCDPVVWVN 834

Query: 872 KLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDLSED 931
           KLSEEFN+GFGS TP+ILGQAKVVRY+ NY RTLD AKT+MKDK YVH+KAD++ID+S+D
Sbjct: 835 KLSEEFNTGFGSQTPLILGQAKVVRYYMNYERTLDAAKTIMKDKLYVHSKADEVIDISKD 894

Query: 932 -----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRT 974
                            V+GEDFWLATWCNST  EGK+LEGTRITL+KMGE G+DFAIRT
Sbjct: 895 EKLRDIMDAKTCSELYKVIGEDFWLATWCNSTVIEGKRLEGTRITLMKMGEHGFDFAIRT 954

Query: 975 PCTPSRWDEFDAEMTMAWE 993
           PCTP RWDEFDAEM MAWE
Sbjct: 955 PCTPPRWDEFDAEMAMAWE 973



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/110 (48%), Positives = 69/110 (62%), Gaps = 12/110 (10%)

Query: 953  LEGTRITLVKM------------GESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAIL 1000
            LE  R T+++M            G +   F +      +   EF+ ++    +VDWEAIL
Sbjct: 992  LENVRDTILRMTYYWYNFMPLSRGSAAVGFIVLLGLLLAANMEFEGKIPKGIQVDWEAIL 1051

Query: 1001 NSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVVAALSSYDD 1050
            N +P  F+DS+KSWL PSLK +TSWK+YPDV ST ATTGSVVAALSSY+D
Sbjct: 1052 NFEPSSFVDSIKSWLCPSLKVTTSWKDYPDVASTIATTGSVVAALSSYND 1101


>gi|225438920|ref|XP_002279290.1| PREDICTED: tetratricopeptide repeat protein 13-like [Vitis vinifera]
          Length = 1068

 Score = 1330 bits (3442), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1035 (67%), Positives = 806/1035 (77%), Gaps = 70/1035 (6%)

Query: 33   MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
            M SAI+ R ELAKLCS R+WSKAIR+LDSLLAQS  IQDICNRAFCYS+LELHKHVIRDC
Sbjct: 1    MESAISERQELAKLCSCRDWSKAIRVLDSLLAQSCVIQDICNRAFCYSKLELHKHVIRDC 60

Query: 93   DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
            DKALQL+PTLLQAYILKG A SALG+KE+AL VWE+GY HA+ QSADLKQFLELEELL  
Sbjct: 61   DKALQLEPTLLQAYILKGHALSALGKKEDALLVWEQGYGHAVRQSADLKQFLELEELL-- 118

Query: 153  AKQDRSVTCE-YDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETC 211
             KQ+R +TCE + + +  SS++VSES L+ N+K + T +N +K +         D SE C
Sbjct: 119  -KQNRRITCENHAMESPESSISVSESALHVNEKPNSTHKNDSKLN---------DESELC 168

Query: 212  SKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDAS 271
            S+SS   +                       I+ K     +N +  +D S+    S D S
Sbjct: 169  SESSDTSE-----------------------IHCKPNSTHKNDSKLNDESELCSESSDTS 205

Query: 272  EINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKS 331
            EI+ ++ D  D  +   D  + NE+   ++NGT+D+  K S +S   ++ N  SE  SKS
Sbjct: 206  EIHCKAFDTSDGHDELRDTVNGNEKLNSESNGTYDIFVKSSDESELCSELNDTSEQSSKS 265

Query: 332  SIS-DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
            S+   +KSSD +E R K S K+D+  E  +EA RNKKFCVTRISK+KSISVDFRLSRGIA
Sbjct: 266  SVVIHSKSSDISEVRRKSSNKYDIRSELGDEANRNKKFCVTRISKTKSISVDFRLSRGIA 325

Query: 391  QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
            QVNEG Y++AISIFDQILKEDP YPEAL+GRGTA AFQREL +AI+DFT+AI+SNPSA E
Sbjct: 326  QVNEGNYSNAISIFDQILKEDPTYPEALVGRGTAYAFQRELSSAIADFTKAIESNPSACE 385

Query: 451  AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
            AWKRRGQARAALGES EAI+DL+KALEFEPNS DILHERGIVNFKFKDFNAAVEDLSACV
Sbjct: 386  AWKRRGQARAALGESSEAIEDLTKALEFEPNSTDILHERGIVNFKFKDFNAAVEDLSACV 445

Query: 511  KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
            +LDKENKSAYTYLGLALSSIGEYK+AEEAH+K+IQLD+NFLE W HLTQFYQDLAN  KA
Sbjct: 446  QLDKENKSAYTYLGLALSSIGEYKRAEEAHMKSIQLDQNFLEGWAHLTQFYQDLANPTKA 505

Query: 571  LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
            LEC+++VL ID+ F+KAYHLRGLL HG+G+HKKAI DLS GLGI+ SNIECLYLRASCYH
Sbjct: 506  LECIERVLQIDEGFAKAYHLRGLLRHGMGEHKKAITDLSIGLGIENSNIECLYLRASCYH 565

Query: 631  AIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDID 690
            AIGEY EAIKDYD AL LELDSMEKFVLQCLAFYQKE+ALY ASK+N EFCWFDID DI+
Sbjct: 566  AIGEYGEAIKDYDKALTLELDSMEKFVLQCLAFYQKELALYAASKMNVEFCWFDIDRDIN 625

Query: 691  PLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIGKKI 750
            PLFKEYWCKRLHPK+V E V+RQP    SLKK K R+QDF+VTKQK ALL  ADSIGKKI
Sbjct: 626  PLFKEYWCKRLHPKHVSENVFRQP----SLKKNKHRKQDFAVTKQKAALLHAADSIGKKI 681

Query: 751  QYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRIN 810
            QY+CPGFL NRRQHRMAGLAAIEIAQKVSK WRSLQ E    NR++SK+GK+ARRK++IN
Sbjct: 682  QYNCPGFLPNRRQHRMAGLAAIEIAQKVSKAWRSLQVE---RNRNTSKHGKKARRKEKIN 738

Query: 811  IASQNRGGAGC-STSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVW 869
              S NRGGAGC ++SSS  ++SY ITE+RSSG P MSW DVY+LAVKWRQISEPCDPVVW
Sbjct: 739  TPSLNRGGAGCSTSSSSETSTSYSITEDRSSGRPMMSWHDVYSLAVKWRQISEPCDPVVW 798

Query: 870  VNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDLS 929
            VNKLSEEFNSGFGSHTP+ILGQAKVVRYFPNY RTLDVAKTVMK+K+YVHNKADDI+ LS
Sbjct: 799  VNKLSEEFNSGFGSHTPLILGQAKVVRYFPNYQRTLDVAKTVMKEKRYVHNKADDIMYLS 858

Query: 930  ED-----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAI 972
            ED                 +VGEDFWLATWCNSTA EGK+LEGTRITL+KMGE G+DFAI
Sbjct: 859  EDGKLQEIMHAESCSDLYKIVGEDFWLATWCNSTAIEGKRLEGTRITLLKMGEHGFDFAI 918

Query: 973  RTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHF-----FLDSVKSWLYPSLKTSTSWKE 1027
            RTPCTPSRWD+FD EM +AW+    A      +       L++V+  +   L+ +  W  
Sbjct: 919  RTPCTPSRWDDFDTEMAVAWDALCNAYCGEKTYGSTNFDMLENVRDAI---LRMTYYWYN 975

Query: 1028 YPDVTSTFATTGSVV 1042
            +  ++   A  G VV
Sbjct: 976  FMPLSRGTAAVGFVV 990



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query: 983  EFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVV 1042
            EF   +   ++VDWEAILN +P  FLDSVKSWLYPSLK +TSWKEYPDV STF+TTGSVV
Sbjct: 1001 EFTGSIPKDFQVDWEAILNLEPDSFLDSVKSWLYPSLKVTTSWKEYPDVASTFSTTGSVV 1060

Query: 1043 AALSSYDD 1050
            AALSSYDD
Sbjct: 1061 AALSSYDD 1068


>gi|357482705|ref|XP_003611639.1| Tetratricopeptide repeat protein [Medicago truncatula]
 gi|355512974|gb|AES94597.1| Tetratricopeptide repeat protein [Medicago truncatula]
          Length = 1033

 Score = 1278 bits (3306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/986 (65%), Positives = 758/986 (76%), Gaps = 105/986 (10%)

Query: 32  VMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRD 91
           + A A + R ELAKLCS ++WSKAIRILDSL++QS  IQDICNRAFCYSQLELHKHVI+D
Sbjct: 1   MAAPATSQRTELAKLCSTKDWSKAIRILDSLISQSTAIQDICNRAFCYSQLELHKHVIKD 60

Query: 92  CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLT 151
           CD+A+QL+P LLQAYILKG AFSALGRK +AL VWE+GYE A H SADLKQ +ELEELL 
Sbjct: 61  CDRAIQLNPLLLQAYILKGHAFSALGRKADALLVWEQGYEQAQHHSADLKQLIELEELLV 120

Query: 152 AAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDS----SSQSRDV 207
            AKQ        + SN  + L++ ++        S++S N N ++ C+S    S  + D 
Sbjct: 121 KAKQ------AINSSNETNGLSIPQA-------KSDSSSNRNLTETCESQAKLSGNTSDK 167

Query: 208 SETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHAS 267
           SE   KS+   D  N  + E  GG S   SK    +NG    +      SSD S+S    
Sbjct: 168 SEVLLKSADKFDARNELNSE--GGES---SKCDGQVNGSPDIIDNLRYDSSDTSES---- 218

Query: 268 RDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSES 327
                           C+                        K+ ++S   +DSN  +E 
Sbjct: 219 ----------------CD------------------------KVLTNSGESSDSNDAAEI 238

Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR 387
             K S              K +F      E S+EA+++KKF V R+SK+KSISVDFRLSR
Sbjct: 239 LRKPSF-------------KFTFP----SEKSSEARKSKKFSVARVSKTKSISVDFRLSR 281

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA+VNEGKYA AISIFDQILKED  YPEALIGRGTA AF+REL +AI+DFT+AIQ NP+
Sbjct: 282 GIAEVNEGKYAHAISIFDQILKEDSAYPEALIGRGTAYAFKRELHSAIADFTKAIQYNPA 341

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           AGEAWKRRGQARAALGE VEAI+DL+KALEFEPN+ADILHERGIVNFKFK+FN AVEDLS
Sbjct: 342 AGEAWKRRGQARAALGEFVEAIEDLTKALEFEPNTADILHERGIVNFKFKEFNTAVEDLS 401

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
           ACV+LD++NKSAYTYLGLALSSIGEYKKAEEAHLK++QLD++FLEAWGHLTQFYQDL+  
Sbjct: 402 ACVQLDRDNKSAYTYLGLALSSIGEYKKAEEAHLKSLQLDKSFLEAWGHLTQFYQDLSKP 461

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
            KALECL QVL ID RF++AYHLRG+L H +G+H+KAIKDL++GL ID +NIE LYLRA+
Sbjct: 462 TKALECLTQVLQIDGRFARAYHLRGVLFHAMGEHRKAIKDLTTGLSIDGANIESLYLRAA 521

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG 687
           CYHA+G+Y+EA+KDYDAALDLELDSM+KFVLQCLAFYQKEI LYTASK NSEFCWFDIDG
Sbjct: 522 CYHAVGQYKEAVKDYDAALDLELDSMDKFVLQCLAFYQKEITLYTASKFNSEFCWFDIDG 581

Query: 688 DIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIG 747
           DIDPLFKEYWCKRLHPKNVCEKV+RQPPLR+SL+KGKLR+Q+ ++TKQK+AL+  ADSIG
Sbjct: 582 DIDPLFKEYWCKRLHPKNVCEKVFRQPPLRESLRKGKLRKQELTLTKQKSALIQAADSIG 641

Query: 748 KKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNR--SSSKNGKRARR 805
           +KIQYDCPGFL NRRQHRM+G AAIE+AQKVSKIWR LQAEWK SN+  S+SK+GKR RR
Sbjct: 642 QKIQYDCPGFLPNRRQHRMSGFAAIEVAQKVSKIWRILQAEWKSSNKPNSNSKHGKRVRR 701

Query: 806 KDRINIASQNRGGAGCSTSSSSDTSSYGITEER-SSGHPKMSWQDVYTLAVKWRQISEPC 864
           ++RIN+ SQNRGGAGCSTSS  +TSS GI +++ SS H  MSW+D+Y++AV+WRQISEPC
Sbjct: 702 RERINLPSQNRGGAGCSTSSVFETSSSGIVDDKLSSRH--MSWKDIYSIAVRWRQISEPC 759

Query: 865 DPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADD 924
           DPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNY RTLD+AKTVMK++ YVH K D 
Sbjct: 760 DPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYERTLDIAKTVMKERSYVHGKTDQ 819

Query: 925 IIDLSED-----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESG 967
           II LS D                 VVGEDFW +TWCNSTAFEGKQLEGTR+TLVKMG+ G
Sbjct: 820 IIHLSNDGKLEEIMHAKSCSDLYKVVGEDFWSSTWCNSTAFEGKQLEGTRVTLVKMGQHG 879

Query: 968 YDFAIRTPCTPSRWDEFDAEMTMAWE 993
           +DFAIRTPCTP+RW+++DAEM MAWE
Sbjct: 880 FDFAIRTPCTPARWEDYDAEMAMAWE 905



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 70/110 (63%), Gaps = 12/110 (10%)

Query: 953  LEGTRITLVKM------------GESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAIL 1000
            LE  R  +++M            G +   FA+      +   EF   +   ++VDWEAIL
Sbjct: 924  LENVRDAILRMTYYWYNFMPLSRGTAAVGFAVMLGLLLAANMEFTGSIPQGFQVDWEAIL 983

Query: 1001 NSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVVAALSSYDD 1050
            N DP+ F+DSVKSWLYPSLK +TSWK+Y DV STFATTGSVVAALSSYD+
Sbjct: 984  NLDPNSFVDSVKSWLYPSLKVTTSWKDYHDVASTFATTGSVVAALSSYDE 1033


>gi|357482701|ref|XP_003611637.1| Tetratricopeptide repeat protein [Medicago truncatula]
 gi|355512972|gb|AES94595.1| Tetratricopeptide repeat protein [Medicago truncatula]
          Length = 1062

 Score = 1277 bits (3305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/986 (65%), Positives = 758/986 (76%), Gaps = 105/986 (10%)

Query: 32  VMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRD 91
           + A A + R ELAKLCS ++WSKAIRILDSL++QS  IQDICNRAFCYSQLELHKHVI+D
Sbjct: 1   MAAPATSQRTELAKLCSTKDWSKAIRILDSLISQSTAIQDICNRAFCYSQLELHKHVIKD 60

Query: 92  CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLT 151
           CD+A+QL+P LLQAYILKG AFSALGRK +AL VWE+GYE A H SADLKQ +ELEELL 
Sbjct: 61  CDRAIQLNPLLLQAYILKGHAFSALGRKADALLVWEQGYEQAQHHSADLKQLIELEELLV 120

Query: 152 AAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDS----SSQSRDV 207
            AKQ        + SN  + L++ ++        S++S N N ++ C+S    S  + D 
Sbjct: 121 KAKQ------AINSSNETNGLSIPQA-------KSDSSSNRNLTETCESQAKLSGNTSDK 167

Query: 208 SETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHAS 267
           SE   KS+   D  N  + E  GG S   SK    +NG    +      SSD S+S    
Sbjct: 168 SEVLLKSADKFDARNELNSE--GGES---SKCDGQVNGSPDIIDNLRYDSSDTSES---- 218

Query: 268 RDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSES 327
                           C+                        K+ ++S   +DSN  +E 
Sbjct: 219 ----------------CD------------------------KVLTNSGESSDSNDAAEI 238

Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR 387
             K S              K +F      E S+EA+++KKF V R+SK+KSISVDFRLSR
Sbjct: 239 LRKPSF-------------KFTFP----SEKSSEARKSKKFSVARVSKTKSISVDFRLSR 281

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA+VNEGKYA AISIFDQILKED  YPEALIGRGTA AF+REL +AI+DFT+AIQ NP+
Sbjct: 282 GIAEVNEGKYAHAISIFDQILKEDSAYPEALIGRGTAYAFKRELHSAIADFTKAIQYNPA 341

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           AGEAWKRRGQARAALGE VEAI+DL+KALEFEPN+ADILHERGIVNFKFK+FN AVEDLS
Sbjct: 342 AGEAWKRRGQARAALGEFVEAIEDLTKALEFEPNTADILHERGIVNFKFKEFNTAVEDLS 401

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
           ACV+LD++NKSAYTYLGLALSSIGEYKKAEEAHLK++QLD++FLEAWGHLTQFYQDL+  
Sbjct: 402 ACVQLDRDNKSAYTYLGLALSSIGEYKKAEEAHLKSLQLDKSFLEAWGHLTQFYQDLSKP 461

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
            KALECL QVL ID RF++AYHLRG+L H +G+H+KAIKDL++GL ID +NIE LYLRA+
Sbjct: 462 TKALECLTQVLQIDGRFARAYHLRGVLFHAMGEHRKAIKDLTTGLSIDGANIESLYLRAA 521

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG 687
           CYHA+G+Y+EA+KDYDAALDLELDSM+KFVLQCLAFYQKEI LYTASK NSEFCWFDIDG
Sbjct: 522 CYHAVGQYKEAVKDYDAALDLELDSMDKFVLQCLAFYQKEITLYTASKFNSEFCWFDIDG 581

Query: 688 DIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIG 747
           DIDPLFKEYWCKRLHPKNVCEKV+RQPPLR+SL+KGKLR+Q+ ++TKQK+AL+  ADSIG
Sbjct: 582 DIDPLFKEYWCKRLHPKNVCEKVFRQPPLRESLRKGKLRKQELTLTKQKSALIQAADSIG 641

Query: 748 KKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNR--SSSKNGKRARR 805
           +KIQYDCPGFL NRRQHRM+G AAIE+AQKVSKIWR LQAEWK SN+  S+SK+GKR RR
Sbjct: 642 QKIQYDCPGFLPNRRQHRMSGFAAIEVAQKVSKIWRILQAEWKSSNKPNSNSKHGKRVRR 701

Query: 806 KDRINIASQNRGGAGCSTSSSSDTSSYGITEER-SSGHPKMSWQDVYTLAVKWRQISEPC 864
           ++RIN+ SQNRGGAGCSTSS  +TSS GI +++ SS H  MSW+D+Y++AV+WRQISEPC
Sbjct: 702 RERINLPSQNRGGAGCSTSSVFETSSSGIVDDKLSSRH--MSWKDIYSIAVRWRQISEPC 759

Query: 865 DPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADD 924
           DPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNY RTLD+AKTVMK++ YVH K D 
Sbjct: 760 DPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYERTLDIAKTVMKERSYVHGKTDQ 819

Query: 925 IIDLSED-----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESG 967
           II LS D                 VVGEDFW +TWCNSTAFEGKQLEGTR+TLVKMG+ G
Sbjct: 820 IIHLSNDGKLEEIMHAKSCSDLYKVVGEDFWSSTWCNSTAFEGKQLEGTRVTLVKMGQHG 879

Query: 968 YDFAIRTPCTPSRWDEFDAEMTMAWE 993
           +DFAIRTPCTP+RW+++DAEM MAWE
Sbjct: 880 FDFAIRTPCTPARWEDYDAEMAMAWE 905



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/87 (59%), Positives = 63/87 (72%)

Query: 964  GESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTST 1023
            G +   FA+      +   EF   +   ++VDWEAILN DP+ F+DSVKSWLYPSLK +T
Sbjct: 976  GTAAVGFAVMLGLLLAANMEFTGSIPQGFQVDWEAILNLDPNSFVDSVKSWLYPSLKVTT 1035

Query: 1024 SWKEYPDVTSTFATTGSVVAALSSYDD 1050
            SWK+Y DV STFATTGSVVAALSSYD+
Sbjct: 1036 SWKDYHDVASTFATTGSVVAALSSYDE 1062


>gi|449520722|ref|XP_004167382.1| PREDICTED: tetratricopeptide repeat protein 13-like [Cucumis
           sativus]
          Length = 1046

 Score = 1266 bits (3277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/981 (65%), Positives = 757/981 (77%), Gaps = 83/981 (8%)

Query: 33  MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
           MA AI+ R+ELAK C  ++WSKAIR+LDSL+A+S  +QDICNRAFCYSQLELHKHVI+DC
Sbjct: 1   MAPAISERVELAKFCRSKDWSKAIRVLDSLIAKSCTVQDICNRAFCYSQLELHKHVIKDC 60

Query: 93  DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
           D+ALQLDP++LQAY+LKG A+ ALG++ +ALS+WE+GY++AL Q+ DLKQ LELEEL+T 
Sbjct: 61  DRALQLDPSILQAYVLKGQAYFALGKRGDALSIWERGYQYALCQTTDLKQLLELEELMTR 120

Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
            KQ+++     +V +  S++   ESG+ +                  +S   R+ +    
Sbjct: 121 EKQEKNNVENGEVESRFSAVG-PESGVTS------------------ASKNCRETNNNVG 161

Query: 213 KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
           K    PD C                                             S D+SE
Sbjct: 162 KLMEHPDFC-------------------------------------------MKSSDSSE 178

Query: 273 INRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESY---S 329
           +   SSD+  +C G  ++   N     ++NG  D  D+LS D++ L+D  ++   +   S
Sbjct: 179 VCSISSDNLVVCEGGCEEVGPNRDIKCESNGCTDNDDRLS-DASKLHDLRSDMPEFCNKS 237

Query: 330 KSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGI 389
           K +   +KS DST+  SK S   D+    S+EA+R KKF V +ISK+KSISVDFRLSRGI
Sbjct: 238 KLTAFHSKSGDSTDILSKSSKTSDVRGNVSDEARRTKKFSVAKISKTKSISVDFRLSRGI 297

Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
           A+VNEGKYA+AISIFDQILKEDP YPEALIGRGTA AFQREL+AAISDFT+A++SNP AG
Sbjct: 298 AEVNEGKYANAISIFDQILKEDPSYPEALIGRGTAYAFQRELDAAISDFTKALESNPFAG 357

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
           EAWKRRGQARAALG S EAI+DL+KALE EPNSADILHERGIVNFKFKDF AAVEDLS C
Sbjct: 358 EAWKRRGQARAALGASAEAIEDLTKALELEPNSADILHERGIVNFKFKDFYAAVEDLSEC 417

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           +KLD  N SAYTYLGLALSSIG+YK+AEEAHLK+IQLDRNFLEAWGHLTQFYQDLANS K
Sbjct: 418 LKLDGCNTSAYTYLGLALSSIGDYKRAEEAHLKSIQLDRNFLEAWGHLTQFYQDLANSTK 477

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           ALECL QVL ID  F KAYHLRGLL HG+G+H+KAIKDLS GL I+ +NIECLYLRASCY
Sbjct: 478 ALECLHQVLQIDSTFGKAYHLRGLLYHGMGEHRKAIKDLSIGLKIENANIECLYLRASCY 537

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDI 689
           HAIGEY  A+KDYD  LDL+LDSMEKFVLQCLAFYQKEIALYTASK +S+FCWFDIDGDI
Sbjct: 538 HAIGEYGLAVKDYDVTLDLDLDSMEKFVLQCLAFYQKEIALYTASKSSSDFCWFDIDGDI 597

Query: 690 DPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIGKK 749
           DPLFKEYWCKRLHPK+VCEKV+RQPP+R+SLKKG+LR+Q+  +TKQK +LLL AD+ G+K
Sbjct: 598 DPLFKEYWCKRLHPKDVCEKVFRQPPIRESLKKGRLRKQEHGMTKQKISLLLAADTTGRK 657

Query: 750 IQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRI 809
           IQYDCPGFLSNRRQHRMAGLA I++AQKVS+ WR++QAEWK SN+S++K+GKRARR++R 
Sbjct: 658 IQYDCPGFLSNRRQHRMAGLAVIDVAQKVSRTWRAMQAEWKCSNKSNTKHGKRARRRERP 717

Query: 810 NIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVW 869
           +IASQNRGGAGCSTS  S+ SS    E+R SGH  +SWQDV++ AVKWRQISEPCDPVVW
Sbjct: 718 SIASQNRGGAGCSTSGFSEPSSSSHLEDRLSGHNFISWQDVFSFAVKWRQISEPCDPVVW 777

Query: 870 VNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDLS 929
           +NKLSEEFNSGFGSHTPMILGQAKVVRY+PN+ RTL+VAK V+K K +V+NK+D ++DL 
Sbjct: 778 INKLSEEFNSGFGSHTPMILGQAKVVRYYPNFERTLEVAKAVIKHKPFVYNKSDLMVDLR 837

Query: 930 ED-----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAI 972
           ED                 VVGEDFWLATWCNSTAFEGKQLEGTRITLVK GE G+DFAI
Sbjct: 838 EDGKLQNIMQAKSCSDLYKVVGEDFWLATWCNSTAFEGKQLEGTRITLVKTGERGFDFAI 897

Query: 973 RTPCTPSRWDEFDAEMTMAWE 993
           RTPCTPSRW+EFDAEM MAWE
Sbjct: 898 RTPCTPSRWEEFDAEMAMAWE 918



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 55/68 (80%)

Query: 983  EFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVV 1042
            EF   +    +VDWEA+LN +P+ F+DSVKSWLYPSLK +TSWKEYPDV ST  TTGSVV
Sbjct: 979  EFCGNIPRGLQVDWEAMLNFNPNSFVDSVKSWLYPSLKMTTSWKEYPDVASTLKTTGSVV 1038

Query: 1043 AALSSYDD 1050
            AALSSYDD
Sbjct: 1039 AALSSYDD 1046


>gi|449448472|ref|XP_004141990.1| PREDICTED: tetratricopeptide repeat protein 13-like [Cucumis
           sativus]
          Length = 1046

 Score = 1264 bits (3272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/981 (65%), Positives = 757/981 (77%), Gaps = 83/981 (8%)

Query: 33  MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
           MA AI+ R+ELAK C  ++WSKAIR+LDSL+A+S  +QDICNRAFCYSQLELHKHVI+DC
Sbjct: 1   MAPAISERVELAKFCRSKDWSKAIRVLDSLIAKSCTVQDICNRAFCYSQLELHKHVIKDC 60

Query: 93  DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
           D+ALQLDP++LQAY+LKG A+ ALG++ +ALS+WE+GY++AL Q+ DLKQ LELEEL+T 
Sbjct: 61  DRALQLDPSILQAYVLKGQAYFALGKRGDALSIWERGYQYALCQTTDLKQLLELEELMTR 120

Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
            KQ+++     +V +  S++   ESG+ +                  +S   R+ +    
Sbjct: 121 EKQEKNNVENGEVESGFSTVG-PESGVTS------------------ASKNCRETNNNVG 161

Query: 213 KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
           K    PD C                                             S D+SE
Sbjct: 162 KLMEHPDFC-------------------------------------------MKSSDSSE 178

Query: 273 INRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESY---S 329
           +   SSD+  +C G  ++   N     ++NG  D  D+LS D++ L+D  ++   +   S
Sbjct: 179 VCSISSDNLVVCEGGCEEVGPNRDIKCESNGCTDNDDRLS-DASKLHDLRSDMPEFCNKS 237

Query: 330 KSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGI 389
           K +   +KS DST+  SK S   D+    S+EA+R KKF V +ISK+KSISVDFRLSRGI
Sbjct: 238 KLTAFHSKSGDSTDILSKSSKTSDVRGNVSDEARRTKKFSVAKISKTKSISVDFRLSRGI 297

Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
           A+VNEGKYA+AISIFDQILKEDP YPEALIGRGTA AFQREL+AAISDFT+A++SNP AG
Sbjct: 298 AEVNEGKYANAISIFDQILKEDPSYPEALIGRGTAYAFQRELDAAISDFTKALESNPFAG 357

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
           EAWKRRGQARAALG S EAI+DL+KALE EPNSADILHERGIVNFKFKDF AAVEDLS C
Sbjct: 358 EAWKRRGQARAALGASAEAIEDLTKALELEPNSADILHERGIVNFKFKDFYAAVEDLSEC 417

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           +KLD  N SAYTYLGLALSSIG+YK+AEEAHLK+IQLDRNFLEAWGHLTQFYQDLANS K
Sbjct: 418 LKLDGCNTSAYTYLGLALSSIGDYKRAEEAHLKSIQLDRNFLEAWGHLTQFYQDLANSTK 477

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           ALECL QVL ID  F KAYHLRGLL HG+G+H+KAIKDLS GL I+ +NIECLYLRASCY
Sbjct: 478 ALECLHQVLQIDSTFGKAYHLRGLLYHGMGEHRKAIKDLSIGLKIENANIECLYLRASCY 537

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDI 689
           HAIGEY  A+KDYDA LDL+LDSMEKFVLQCLAFYQKEIALYTASK +S+FCWFDIDGDI
Sbjct: 538 HAIGEYGLAVKDYDATLDLDLDSMEKFVLQCLAFYQKEIALYTASKSSSDFCWFDIDGDI 597

Query: 690 DPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIGKK 749
           DPLFKEYWCKRLHPK+VCEKV+RQPP+R+SLKKG+LR+Q+  +TKQK +LLL AD+ G+K
Sbjct: 598 DPLFKEYWCKRLHPKDVCEKVFRQPPIRESLKKGRLRKQEHGMTKQKISLLLAADTTGRK 657

Query: 750 IQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRI 809
           IQYDCPGFLSNRRQHRMAGLA I++AQKVS+ WR++ AEWK SN+S++K+GKRARR++R 
Sbjct: 658 IQYDCPGFLSNRRQHRMAGLAVIDVAQKVSRTWRAMLAEWKCSNKSNTKHGKRARRRERP 717

Query: 810 NIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVW 869
           +IASQNRGGAGCSTS  S+ SS    E+R SGH  +SWQDV++ AVKWRQISEPCDPVVW
Sbjct: 718 SIASQNRGGAGCSTSGFSEPSSSSHLEDRLSGHNFISWQDVFSFAVKWRQISEPCDPVVW 777

Query: 870 VNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDLS 929
           +NKLSEEFNSGFGSHTPMILGQAKVVRY+PN+ RTL+VAK V+K K +V+NK+D ++DL 
Sbjct: 778 INKLSEEFNSGFGSHTPMILGQAKVVRYYPNFERTLEVAKAVIKHKPFVYNKSDLMVDLR 837

Query: 930 ED-----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAI 972
           ED                 VVGEDFWLATWCNSTAFEGKQLEGTRITLVK GE G+DFAI
Sbjct: 838 EDGKLQNIMQAKSCSDLYKVVGEDFWLATWCNSTAFEGKQLEGTRITLVKTGERGFDFAI 897

Query: 973 RTPCTPSRWDEFDAEMTMAWE 993
           RTPCTPSRW+EFDAEM MAWE
Sbjct: 898 RTPCTPSRWEEFDAEMAMAWE 918



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 55/68 (80%)

Query: 983  EFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVV 1042
            EF   +    +VDWEA+LN DP+ F+DSVKSWLYPSLK +TSWKEYPDV ST  TTGSVV
Sbjct: 979  EFCGNIPRGLQVDWEAMLNFDPNSFVDSVKSWLYPSLKMTTSWKEYPDVASTLKTTGSVV 1038

Query: 1043 AALSSYDD 1050
            AALSSYDD
Sbjct: 1039 AALSSYDD 1046


>gi|356496945|ref|XP_003517325.1| PREDICTED: tetratricopeptide repeat protein 13-like [Glycine max]
          Length = 1047

 Score = 1232 bits (3188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/991 (65%), Positives = 752/991 (75%), Gaps = 102/991 (10%)

Query: 33  MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
           MA   + R  LA+LCS ++WSKAIR+LDSL++QS  IQDICNRAFCYS+LELHKHVI+DC
Sbjct: 1   MAPTTSQRATLARLCSSKDWSKAIRVLDSLVSQSGAIQDICNRAFCYSRLELHKHVIKDC 60

Query: 93  DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
           +KALQLDP+ LQAYILKG A SALGRK +AL VWE+GYEHA HQSADLK  LELEELLT 
Sbjct: 61  NKALQLDPSRLQAYILKGHALSALGRKTDALLVWEQGYEHAQHQSADLKLLLELEELLTT 120

Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK----SDICDSSSQSRDVS 208
            KQ  S   E     + S ++ SES   ++  ++E  EN ++     ++CD++S   D S
Sbjct: 121 TKQGNSALYE----TNGSPVSQSESDSPSDGNLTEICENQDRLSVQDELCDNAS---DKS 173

Query: 209 ETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHING------KLREVSENHNGSSDGSK 262
               KS+ + DL N  + E +       +KS   +NG      KL   SE+ N SSD S+
Sbjct: 174 LILLKSADNFDLRNELNIEDRES-----NKSDSQVNGSPDVIDKLSYNSESCNDSSDTSE 228

Query: 263 STHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSN 322
           S    +  +     SSD  D+                      ++  KLSS         
Sbjct: 229 SCDKDKVFTNSGESSSDSLDVA---------------------EILRKLSS--------- 258

Query: 323 TNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD 382
                                       K++   E   EA++N KFCV RISK+KSISVD
Sbjct: 259 ----------------------------KFNFPHEKIGEARKN-KFCVARISKTKSISVD 289

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           FRLSRGI +VNEGKYA AISIFDQILKEDP YPEALIGRGTA AF+REL+AAI+DF++AI
Sbjct: 290 FRLSRGIGEVNEGKYAHAISIFDQILKEDPAYPEALIGRGTAYAFKRELDAAIADFSKAI 349

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + NPSAGEAWKRRGQARAALGE VEAI+DL+ ALEFE NSADILHERGIVNFKFK+F+AA
Sbjct: 350 EFNPSAGEAWKRRGQARAALGEFVEAIEDLTMALEFESNSADILHERGIVNFKFKEFDAA 409

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           VEDLSACV+LD++NKSAYTYLGLALSSIGEYKKAEEAHLK++Q+DRNFLEAW HLTQFYQ
Sbjct: 410 VEDLSACVQLDRDNKSAYTYLGLALSSIGEYKKAEEAHLKSLQIDRNFLEAWAHLTQFYQ 469

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           DL+   KA ECL Q+L ID RF++AYHLRGLL H +G+H+KAI DL+  L +D +N+ECL
Sbjct: 470 DLSKPTKAQECLNQMLQIDGRFARAYHLRGLLFHAMGEHRKAISDLTMSLNVDGANVECL 529

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCW 682
           YLR SCYHA+G Y+EA+KDYDAALDLELDSM+KFVLQCLAFYQKEIALYTASK NSEFCW
Sbjct: 530 YLRGSCYHAVGRYKEAVKDYDAALDLELDSMDKFVLQCLAFYQKEIALYTASKFNSEFCW 589

Query: 683 FDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLV 742
           FDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPP R+SL+KGKLR+Q+  +TKQKTAL+  
Sbjct: 590 FDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPFRESLRKGKLRKQELVLTKQKTALIQA 649

Query: 743 ADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEW--KYSNRSSSKNG 800
           ADSIGK+IQYDCPGFL N RQHRMAG AAIEIAQKVSK WRS QAEW     N S+SKNG
Sbjct: 650 ADSIGKRIQYDCPGFLPNGRQHRMAGFAAIEIAQKVSKAWRSFQAEWKHSNKNNSNSKNG 709

Query: 801 KRARRKDRINIASQNRGGAGCSTSSSSDTS-SYGITEERSSGHPKMSWQDVYTLAVKWRQ 859
           KRARR++RIN+ SQNRGGAGCSTSS+S+ S SYGI  +RSS    MSWQDVY++AV+WRQ
Sbjct: 710 KRARRRERINMLSQNRGGAGCSTSSASEISPSYGIAVDRSSSR-SMSWQDVYSIAVRWRQ 768

Query: 860 ISEPCDPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH 919
           ISEPCDPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNY RTLD+AKTV+K+K YV+
Sbjct: 769 ISEPCDPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYERTLDIAKTVIKEKSYVY 828

Query: 920 NKADDIIDLSED-----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLVK 962
           +K D II LS+D                 VVGEDFW +TWCNSTAFEGKQLEGTRITLVK
Sbjct: 829 SKTDQIIRLSKDGKLEEVIHANSVSDLYNVVGEDFWSSTWCNSTAFEGKQLEGTRITLVK 888

Query: 963 MGESGYDFAIRTPCTPSRWDEFDAEMTMAWE 993
           MGE+G+DFAIRTPCTP+RW+++DAEM MAWE
Sbjct: 889 MGENGFDFAIRTPCTPARWEDYDAEMAMAWE 919



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 48/68 (70%), Positives = 56/68 (82%)

Query: 983  EFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVV 1042
            EF   +   ++VDWEA+LN DP+ F+DSVKSWLYPSLK +TSWK+Y DV STFATTGSVV
Sbjct: 980  EFTGSIPQGFQVDWEAVLNLDPNSFVDSVKSWLYPSLKVTTSWKDYHDVASTFATTGSVV 1039

Query: 1043 AALSSYDD 1050
            AALSS DD
Sbjct: 1040 AALSSSDD 1047


>gi|356565517|ref|XP_003550986.1| PREDICTED: tetratricopeptide repeat protein 13-like [Glycine max]
          Length = 1042

 Score = 1229 bits (3179), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 642/983 (65%), Positives = 755/983 (76%), Gaps = 90/983 (9%)

Query: 33  MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
           MA A + R+ELA+LC+ ++WSKAIRILDSL++ S  IQD+CNRAFCYS+LELHKHVI+DC
Sbjct: 1   MAPATSERVELARLCASKDWSKAIRILDSLVSHSNAIQDLCNRAFCYSKLELHKHVIKDC 60

Query: 93  DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
           D+ALQLDPTLLQAYILKG A S LGRKE AL VWE+GYEHALHQSADLKQ LELEEL+  
Sbjct: 61  DRALQLDPTLLQAYILKGSALSVLGRKENALLVWEQGYEHALHQSADLKQLLELEELIAT 120

Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHN----KSDICDSSSQSRDVS 208
           AKQ  +  CE   S +  SL  ++S   +N   SET +  +    ++++C  ++   D S
Sbjct: 121 AKQGNNTLCE---SETHRSLPQTKSVSLSNGSSSETCKIQDTLGTRAELCGDATG--DKS 175

Query: 209 ETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASR 268
           ETC KS+ + +L +   DE                    RE S   +G  +GS       
Sbjct: 176 ETCLKSADNSNLKHESHDE-------------------YRE-SNKSDGQVNGSPDV---L 212

Query: 269 DASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESY 328
           D    N +S +D    +   DK S N                 S DSA++     N    
Sbjct: 213 DTLSYNSESCNDSSDASESSDKVSTN-----------------SGDSANVPKIFRN--PI 253

Query: 329 SKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRG 388
           SK   SD +  +                     A++NKKFCV RIS + SISVDFRLSRG
Sbjct: 254 SKFIFSDERKGE---------------------ARKNKKFCVARISNTNSISVDFRLSRG 292

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           IA+VNEGKYA AISIFDQILK+DP YPEALIGRGTA AFQREL+AAI+DFT+AIQ NP A
Sbjct: 293 IAEVNEGKYAHAISIFDQILKKDPAYPEALIGRGTAYAFQRELDAAIADFTKAIQFNPLA 352

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
           GEAWKRRGQARAALGE VEAI+DL+KALEFEP++ADILHERGIVNFKFK+F+AAVEDLSA
Sbjct: 353 GEAWKRRGQARAALGEFVEAIEDLTKALEFEPDTADILHERGIVNFKFKEFDAAVEDLSA 412

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
           CVKLDK+N SAYTYLGLALSSIGEYK+AEEAHLK++QLD+NFLEAW HLTQFYQDLA   
Sbjct: 413 CVKLDKDNTSAYTYLGLALSSIGEYKEAEEAHLKSLQLDKNFLEAWAHLTQFYQDLAKPT 472

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           KA EC+ ++L+ID RF++AYHLRGLL H +G+H+KAIKDL+ GL ID SNIECLYLRASC
Sbjct: 473 KAQECINRMLHIDGRFARAYHLRGLLFHAMGEHRKAIKDLTMGLSIDGSNIECLYLRASC 532

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGD 688
           YHA+G+Y+EA+KDYDAALDLELDSM+KFVLQCL FYQKEIALYTASK N +FCWFDIDGD
Sbjct: 533 YHAVGQYKEAVKDYDAALDLELDSMDKFVLQCLVFYQKEIALYTASKFNGDFCWFDIDGD 592

Query: 689 IDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIGK 748
           ID LFKEYWCK+LHPKNVCEKV+RQPPLR+SL+KGKL++Q+F++TKQK ALL  +DSIG 
Sbjct: 593 IDALFKEYWCKKLHPKNVCEKVFRQPPLRESLRKGKLKKQEFTITKQKAALLQASDSIGM 652

Query: 749 KIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDR 808
           KIQYDCPGFL NRRQHRMAGLAAIEIAQKVSK WRSL AEWKYSN+ +SKNG+RARR++R
Sbjct: 653 KIQYDCPGFLPNRRQHRMAGLAAIEIAQKVSKAWRSLHAEWKYSNKGNSKNGRRARRRER 712

Query: 809 INIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVV 868
           IN+ SQNRGGAGCSTSS+S TSS G  ++R S     SW +VY+LAV+WRQISEPCDPVV
Sbjct: 713 INMPSQNRGGAGCSTSSTSVTSSNGTVDDRLSSR-TFSWHNVYSLAVRWRQISEPCDPVV 771

Query: 869 WVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL 928
           WVNKLS+EFN+GFGSHTPMILGQA+VVRYFPNY RTL++AKTVMK++ +V +K D II L
Sbjct: 772 WVNKLSDEFNAGFGSHTPMILGQARVVRYFPNYERTLEIAKTVMKERSFVRSKTDKIIHL 831

Query: 929 SED-----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFA 971
           SED                 V+GEDFWLATWCNSTAFEGKQLEGTRI LVKMGE G+DFA
Sbjct: 832 SEDGKLEEIMHAKSCSDLYKVIGEDFWLATWCNSTAFEGKQLEGTRINLVKMGEHGFDFA 891

Query: 972 IRTPCTPSRWDEFDAEMTMAWEV 994
           I+TPCTP+RW++FD EMT+AWE 
Sbjct: 892 IKTPCTPARWEDFDEEMTVAWET 914



 Score = 1046 bits (2706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/874 (62%), Positives = 648/874 (74%), Gaps = 90/874 (10%)

Query: 266  ASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNS 325
            A+ D SE   +S+D+ ++ +   D+   + +   Q NG+ DV D LS +S S NDS+  S
Sbjct: 170  ATGDKSETCLKSADNSNLKHESHDEYRESNKSDGQVNGSPDVLDTLSYNSESCNDSSDAS 229

Query: 326  ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
            ES  K S +   S++  +       K+    E   EA++NKKFCV RIS + SISVDFRL
Sbjct: 230  ESSDKVSTNSGDSANVPKIFRNPISKFIFSDERKGEARKNKKFCVARISNTNSISVDFRL 289

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            SRGIA+VNEGKYA AISIFDQILK+DP YPEALIGRGTA AFQREL+AAI+DFT+AIQ N
Sbjct: 290  SRGIAEVNEGKYAHAISIFDQILKKDPAYPEALIGRGTAYAFQRELDAAIADFTKAIQFN 349

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P AGEAWKRRGQARAALGE VEAI+DL+KALEFEP++ADILHERGIVNFKFK+F+AAVED
Sbjct: 350  PLAGEAWKRRGQARAALGEFVEAIEDLTKALEFEPDTADILHERGIVNFKFKEFDAAVED 409

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            LSACVKLDK+N SAYTYLGLALSSIGEYK+AEEAHLK++QLD+NFLEAW HLTQFYQDLA
Sbjct: 410  LSACVKLDKDNTSAYTYLGLALSSIGEYKEAEEAHLKSLQLDKNFLEAWAHLTQFYQDLA 469

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
               KA EC+ ++L+ID RF++AYHLRGLL H +G+H+KAIKDL+ GL ID SNIECLYLR
Sbjct: 470  KPTKAQECINRMLHIDGRFARAYHLRGLLFHAMGEHRKAIKDLTMGLSIDGSNIECLYLR 529

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            ASCYHA+G+Y+EA+KDYDAALDLELDSM+KFVLQCL FYQKEIALYTASK N +FCWFDI
Sbjct: 530  ASCYHAVGQYKEAVKDYDAALDLELDSMDKFVLQCLVFYQKEIALYTASKFNGDFCWFDI 589

Query: 686  DGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADS 745
            DGDID LFKEYWCK+LHPKNVCEKV+RQPPLR+SL+KGKL++Q+F++TKQK ALL  +DS
Sbjct: 590  DGDIDALFKEYWCKKLHPKNVCEKVFRQPPLRESLRKGKLKKQEFTITKQKAALLQASDS 649

Query: 746  IGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARR 805
            IG KIQYDCPGFL NRRQHRMAGLAAIEIAQKVSK WRSL AEWKYSN+ +SKNG+RARR
Sbjct: 650  IGMKIQYDCPGFLPNRRQHRMAGLAAIEIAQKVSKAWRSLHAEWKYSNKGNSKNGRRARR 709

Query: 806  KDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCD 865
            ++RIN+ SQNRGGAGCSTSS+S TSS G  ++R S     SW +VY+LAV+WRQISEPCD
Sbjct: 710  RERINMPSQNRGGAGCSTSSTSVTSSNGTVDDRLSSR-TFSWHNVYSLAVRWRQISEPCD 768

Query: 866  PVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDI 925
            PVVWVNKLS+EFN+GFGSHTPMILGQA+VVRYFPNY RTL++AKTVMK++ +V +K D I
Sbjct: 769  PVVWVNKLSDEFNAGFGSHTPMILGQARVVRYFPNYERTLEIAKTVMKERSFVRSKTDKI 828

Query: 926  IDLSED-----------------VVGEDFWLA---------------------------- 940
            I LSED                 V+GEDFWLA                            
Sbjct: 829  IHLSEDGKLEEIMHAKSCSDLYKVIGEDFWLATWCNSTAFEGKQLEGTRINLVKMGEHGF 888

Query: 941  -------------------------TWCNSTAFEG------KQLEGTRITLVKM------ 963
                                     T CN+   E         LE  R  +++M      
Sbjct: 889  DFAIKTPCTPARWEDFDEEMTVAWETLCNAYCGENYGSTDFDTLENVRDAILRMTYYWYN 948

Query: 964  ------GESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYP 1017
                  G +G  F +      +   EF   +    +VDWEAILN DP+ F+DSVK+WLYP
Sbjct: 949  FMPLSRGSAGVGFIVMLGLLLAANMEFTGSIPQGLQVDWEAILNLDPNSFVDSVKTWLYP 1008

Query: 1018 SLKTSTSWKEYPDVTSTFATTGSVVAALS-SYDD 1050
            SLK +TSWK+YPD+ STFATTGS +AAL+ S+DD
Sbjct: 1009 SLKVTTSWKDYPDIASTFATTGSAIAALNFSFDD 1042


>gi|297798124|ref|XP_002866946.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297312782|gb|EFH43205.1| hypothetical protein ARALYDRAFT_912592 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1043

 Score = 1165 bits (3013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1039 (58%), Positives = 748/1039 (71%), Gaps = 103/1039 (9%)

Query: 33   MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
            MA+A + R+ELAK CS RNWSKAIR+LDSLLA+   I DICNRAFCY+QLELHKHVI+DC
Sbjct: 1    MATATSERVELAKHCSSRNWSKAIRVLDSLLAKQSSILDICNRAFCYNQLELHKHVIKDC 60

Query: 93   DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
            DKAL L+P  +QA+ILKG A  ALGRK+EA+ V E+GY++AL Q+AD+KQ LELEELLT 
Sbjct: 61   DKALLLEPCAIQAFILKGRALLALGRKQEAVLVLEQGYKNALQQTADVKQLLELEELLTD 120

Query: 153  AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCS 212
            A++      E D + S      S S    +D+ ++  +NH               S  CS
Sbjct: 121  ARR------EIDATESRQETPASHS--EKSDEKTDKLDNHE--------------SGACS 158

Query: 213  KSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASE 272
                     NG S                H +   RE+ E        SK    S+D S+
Sbjct: 159  ---------NGNS----------------HDHEASRELGEK-------SKIISFSKDTSK 186

Query: 273  INRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNT 323
             ++QS    D+CNG   K   N + G Q NG++         D+HD L+  S  L D + 
Sbjct: 187  ASKQSDGSSDLCNGSAYKEKENGKCGSQINGSYESCKPCNGSDLHDNLAESSDRLGDLSI 246

Query: 324  NSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF 383
            N    +K  I  +K S   E+R              +E ++NKK+ + RIS + SISVDF
Sbjct: 247  NG---NKLIIKSSKMSHKAEARC-------------DETRKNKKYTIARISGTHSISVDF 290

Query: 384  RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
            RLSRGIAQVNEG Y  AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQ
Sbjct: 291  RLSRGIAQVNEGNYMKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQ 350

Query: 444  SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            SNP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV
Sbjct: 351  SNPAATEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAV 410

Query: 504  EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+
Sbjct: 411  KDLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQE 470

Query: 564  LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            LA+  KALEC++QVL +D R  KAYHLRGL+ HGLG+H+KAI++LS GL I+ + IECLY
Sbjct: 471  LADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIGLSIE-NTIECLY 529

Query: 624  LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWF 683
            LR SCYHAIGEYR+A+KDYDA +D+ELD++EKFVLQCLAFYQKE+ALYTASK++SEF  F
Sbjct: 530  LRGSCYHAIGEYRDAVKDYDATVDVELDAVEKFVLQCLAFYQKELALYTASKVSSEFLCF 589

Query: 684  DIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVA 743
            DIDGDIDP+FKEYWCKRLHPKNVCEKVYRQPPLR+SLKKGKL++QD ++TKQK  +L  A
Sbjct: 590  DIDGDIDPMFKEYWCKRLHPKNVCEKVYRQPPLRESLKKGKLKKQDLAITKQKANVLRFA 649

Query: 744  DSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRA 803
            D IGK+IQYDCPGFL N+RQHRMAGLA IEIAQKVSK WR    EW+ S + ++K+GK+ 
Sbjct: 650  DLIGKRIQYDCPGFLPNKRQHRMAGLAVIEIAQKVSKAWR---IEWRNSTKGTTKSGKKN 706

Query: 804  RRKDRINIASQNRGGAGCSTSSSSDTSS-YGITEERSSGHPKMSWQDVYTLAVKWRQISE 862
            RR++R NI SQNRGGAGCS++S S+TS+ Y   E+RSSG   +SWQDVY+ AVKWRQISE
Sbjct: 707  RRRERTNILSQNRGGAGCSSNSFSETSTGYASLEDRSSGRSMLSWQDVYSPAVKWRQISE 766

Query: 863  PCDPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKA 922
            PCDPVVWVNKLSEEFNSGFGSHTPM+LGQAKVVRYFPNY RTL +AK+++KDK  V +K 
Sbjct: 767  PCDPVVWVNKLSEEFNSGFGSHTPMVLGQAKVVRYFPNYERTLTLAKSIIKDKLSVRSKK 826

Query: 923  DDIIDLSED-----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLV-KMG 964
            D +IDLS+D                 +VGEDFW+ATWC+ST  EGK+LEGTRIT + K G
Sbjct: 827  DKVIDLSKDEKIEKIMRAETCDELHKIVGEDFWVATWCDSTGSEGKRLEGTRITCIQKPG 886

Query: 965  ESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSD-PHFFLDSVKSWLYPSLKTST 1023
              GYDF+IRTPCTP+RW +FD EMT AWE    A    +     LD++++     L+ + 
Sbjct: 887  RLGYDFSIRTPCTPARWSDFDEEMTSAWEALCNAYCGENYGSTELDALETVRDAILRMTY 946

Query: 1024 SWKEYPDVTSTFATTGSVV 1042
             W  +  +    A TG VV
Sbjct: 947  YWYNFMPLARGTAVTGFVV 965



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 56/68 (82%)

Query: 983  EFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVV 1042
            EF   +    ++DWEAILN +P  F+DSVKSWLYPSLK +TSW+++PD++S F+TTG+VV
Sbjct: 976  EFTETIPKGLQIDWEAILNVEPDSFVDSVKSWLYPSLKINTSWRDHPDISSAFSTTGAVV 1035

Query: 1043 AALSSYDD 1050
            AALSSY+D
Sbjct: 1036 AALSSYND 1043


>gi|186517170|ref|NP_195462.3| suppressor of RPS4-RLD 1 / tetratricopeptide repeat domain-containing
            protein [Arabidopsis thaliana]
 gi|332661397|gb|AEE86797.1| suppressor of RPS4-RLD 1 / tetratricopeptide repeat domain-containing
            protein [Arabidopsis thaliana]
          Length = 1052

 Score = 1149 bits (2971), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1038 (58%), Positives = 746/1038 (71%), Gaps = 96/1038 (9%)

Query: 34   ASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCD 93
            A+A + R ELAK CS RNWSKAIR+LDSLLA+   I DICNRAFCY+QLELHKHVI+DCD
Sbjct: 4    ATATSERFELAKHCSSRNWSKAIRVLDSLLAKESSILDICNRAFCYNQLELHKHVIKDCD 63

Query: 94   KALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAA 153
            KAL L+P  +QA+ILKG A  ALGRK+EA+ V E+GY+ AL Q+AD+KQ LELEELL  A
Sbjct: 64   KALLLEPFAIQAFILKGRALLALGRKQEAVLVLEQGYKSALQQTADVKQLLELEELLKDA 123

Query: 154  KQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSK 213
            +++        +   + S        +A +   ET   H  S+  D  S   D  E+ + 
Sbjct: 124  RRE--------IDGILKS--------HATESPQETPAYH--SEKSDEKSDKLDNHESGAS 165

Query: 214  SSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEI 273
            S       NG S E+                    E+ E        SK    S+ AS+ 
Sbjct: 166  S-------NGNSHESSS------------------ELGEQ-------SKIVSFSKVASKA 193

Query: 274  NRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNTN 324
            ++QS  + D+CNG + K   N + G Q NG +         D+HD L+  S    + + N
Sbjct: 194  SKQSDGNSDLCNGSVYKEKENGKCGSQINGYYESCKPCNGSDLHDNLAESSDRFGELSIN 253

Query: 325  SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
                +K SI  +K S   E+R  +S          +E+++NKK+ + RIS + SISVDFR
Sbjct: 254  G---NKISIKSSKMSHKAEARCGIS----------DESRKNKKYTIARISGTHSISVDFR 300

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            LSRGIAQVNEG Y  AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQS
Sbjct: 301  LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQS 360

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            NP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV+
Sbjct: 361  NPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVK 420

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+L
Sbjct: 421  DLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQEL 480

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            A+  KALEC++QVL +D R  KAYHLRGL+ HGLG+H+KAI++LS GL I+ + IECLYL
Sbjct: 481  ADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIGLSIE-NTIECLYL 539

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
            R SCYHA+GEYR+A+KDYDA +D+ELD++EKFVLQCLAFYQKE+ALYTASK++SEF  FD
Sbjct: 540  RGSCYHAVGEYRDAVKDYDATVDVELDAVEKFVLQCLAFYQKELALYTASKVSSEFLCFD 599

Query: 685  IDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVAD 744
            IDGDIDP+FKEYWCKRLHPKNVCEKVYRQPPLR+SLKKGKL++QD ++TKQK  +L  AD
Sbjct: 600  IDGDIDPMFKEYWCKRLHPKNVCEKVYRQPPLRESLKKGKLKKQDLAITKQKANILRFAD 659

Query: 745  SIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRAR 804
             IGK+IQYDCPGFL N+RQHRMAGLA IEIAQKVSK WR    EW+ S + ++KNGK+ R
Sbjct: 660  LIGKRIQYDCPGFLPNKRQHRMAGLAVIEIAQKVSKAWR---IEWRNSTKGTTKNGKKNR 716

Query: 805  RKDRINIASQNRGGAGC-STSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEP 863
            R++R NI SQNRGGAGC S+S S  ++ Y   E+RSSG   +SWQDVY+ AV+WRQISEP
Sbjct: 717  RRERTNILSQNRGGAGCSSSSFSETSTGYASLEDRSSGRSILSWQDVYSPAVRWRQISEP 776

Query: 864  CDPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKAD 923
            CDPVVWVNKLSEEFNSGFGSHTPM+LGQAKVVRYFPNY RTL +AK+++KDK  V +K D
Sbjct: 777  CDPVVWVNKLSEEFNSGFGSHTPMVLGQAKVVRYFPNYERTLTLAKSIIKDKLSVRSKKD 836

Query: 924  DIIDLSED-----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLV-KMGE 965
             +IDLS+D                 +VGEDFW+ATWC+ST  EGK+LEGTRIT + K G 
Sbjct: 837  KVIDLSKDEKIEKIMRAETCDELHNIVGEDFWVATWCDSTGSEGKRLEGTRITCIQKPGR 896

Query: 966  SGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSD-PHFFLDSVKSWLYPSLKTSTS 1024
             GYDF+IRTPCTP+RW +FD EMT AWE    A    +     LD++++     L+ +  
Sbjct: 897  LGYDFSIRTPCTPARWSDFDEEMTSAWEALCTAYCGENYGSTELDALETVRDAILRMTYY 956

Query: 1025 WKEYPDVTSTFATTGSVV 1042
            W  +  +    A TG VV
Sbjct: 957  WYNFMPLARGTAVTGFVV 974



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 55/68 (80%)

Query: 983  EFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVV 1042
            EF   +    ++DWEAILN +P  F+DSVKSWLYPSLK +TSW+++ +++S F+TTG+VV
Sbjct: 985  EFTETIPKGLQIDWEAILNVEPGSFVDSVKSWLYPSLKINTSWRDHTEISSAFSTTGAVV 1044

Query: 1043 AALSSYDD 1050
            AALS+Y+D
Sbjct: 1045 AALSTYND 1052


>gi|357482703|ref|XP_003611638.1| Tetratricopeptide repeat protein [Medicago truncatula]
 gi|355512973|gb|AES94596.1| Tetratricopeptide repeat protein [Medicago truncatula]
          Length = 798

 Score = 1134 bits (2933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/879 (65%), Positives = 676/879 (76%), Gaps = 88/879 (10%)

Query: 32  VMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRD 91
           + A A + R ELAKLCS ++WSKAIRILDSL++QS  IQDICNRAFCYSQLELHKHVI+D
Sbjct: 1   MAAPATSQRTELAKLCSTKDWSKAIRILDSLISQSTAIQDICNRAFCYSQLELHKHVIKD 60

Query: 92  CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLT 151
           CD+A+QL+P LLQAYILKG AFSALGRK +AL VWE+GYE A H SADLKQ +ELEELL 
Sbjct: 61  CDRAIQLNPLLLQAYILKGHAFSALGRKADALLVWEQGYEQAQHHSADLKQLIELEELLV 120

Query: 152 AAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDS----SSQSRDV 207
            AKQ        + SN  + L++ ++        S++S N N ++ C+S    S  + D 
Sbjct: 121 KAKQ------AINSSNETNGLSIPQA-------KSDSSSNRNLTETCESQAKLSGNTSDK 167

Query: 208 SETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHAS 267
           SE   KS+   D  N  + E  GG S   SK    +NG    +      SSD S+S    
Sbjct: 168 SEVLLKSADKFDARNELNSE--GGES---SKCDGQVNGSPDIIDNLRYDSSDTSESC--- 219

Query: 268 RDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSES 327
                                                    DK+ ++S   +DSN  +E 
Sbjct: 220 -----------------------------------------DKVLTNSGESSDSNDAAEI 238

Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR 387
             K                  SFK+    E S+EA+++KKF V R+SK+KSISVDFRLSR
Sbjct: 239 LRKP-----------------SFKFTFPSEKSSEARKSKKFSVARVSKTKSISVDFRLSR 281

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA+VNEGKYA AISIFDQILKED  YPEALIGRGTA AF+REL +AI+DFT+AIQ NP+
Sbjct: 282 GIAEVNEGKYAHAISIFDQILKEDSAYPEALIGRGTAYAFKRELHSAIADFTKAIQYNPA 341

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           AGEAWKRRGQARAALGE VEAI+DL+KALEFEPN+ADILHERGIVNFKFK+FN AVEDLS
Sbjct: 342 AGEAWKRRGQARAALGEFVEAIEDLTKALEFEPNTADILHERGIVNFKFKEFNTAVEDLS 401

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
           ACV+LD++NKSAYTYLGLALSSIGEYKKAEEAHLK++QLD++FLEAWGHLTQFYQDL+  
Sbjct: 402 ACVQLDRDNKSAYTYLGLALSSIGEYKKAEEAHLKSLQLDKSFLEAWGHLTQFYQDLSKP 461

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
            KALECL QVL ID RF++AYHLRG+L H +G+H+KAIKDL++GL ID +NIE LYLRA+
Sbjct: 462 TKALECLTQVLQIDGRFARAYHLRGVLFHAMGEHRKAIKDLTTGLSIDGANIESLYLRAA 521

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG 687
           CYHA+G+Y+EA+KDYDAALDLELDSM+KFVLQCLAFYQKEI LYTASK NSEFCWFDIDG
Sbjct: 522 CYHAVGQYKEAVKDYDAALDLELDSMDKFVLQCLAFYQKEITLYTASKFNSEFCWFDIDG 581

Query: 688 DIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIG 747
           DIDPLFKEYWCKRLHPKNVCEKV+RQPPLR+SL+KGKLR+Q+ ++TKQK+AL+  ADSIG
Sbjct: 582 DIDPLFKEYWCKRLHPKNVCEKVFRQPPLRESLRKGKLRKQELTLTKQKSALIQAADSIG 641

Query: 748 KKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNR--SSSKNGKRARR 805
           +KIQYDCPGFL NRRQHRM+G AAIE+AQKVSKIWR LQAEWK SN+  S+SK+GKR RR
Sbjct: 642 QKIQYDCPGFLPNRRQHRMSGFAAIEVAQKVSKIWRILQAEWKSSNKPNSNSKHGKRVRR 701

Query: 806 KDRINIASQNRGGAGCSTSSSSDTSSYGITEER-SSGHPKMSWQDVYTLAVKWRQISEPC 864
           ++RIN+ SQNRGGAGCSTSS  +TSS GI +++ SS H  MSW+D+Y++AV+WRQISEPC
Sbjct: 702 RERINLPSQNRGGAGCSTSSVFETSSSGIVDDKLSSRH--MSWKDIYSIAVRWRQISEPC 759

Query: 865 DPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYAR 903
           DPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNY R
Sbjct: 760 DPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYER 798


>gi|296087356|emb|CBI33730.3| unnamed protein product [Vitis vinifera]
          Length = 981

 Score = 1113 bits (2879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/793 (70%), Positives = 644/793 (81%), Gaps = 34/793 (4%)

Query: 274  NRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSI 333
            NR+ + +      P D  + NE+   ++NGT+D+  K S +S   ++ N  SE  SKSS+
Sbjct: 121  NRRITCENHAMESPEDTVNGNEKLNSESNGTYDIFVKSSDESELCSELNDTSEQSSKSSV 180

Query: 334  S-DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQV 392
               +KSSD +E R K S K+D+  E  +EA RNKKFCVTRISK+KSISVDFRLSRGIAQV
Sbjct: 181  VIHSKSSDISEVRRKSSNKYDIRSELGDEANRNKKFCVTRISKTKSISVDFRLSRGIAQV 240

Query: 393  NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
            NEG Y++AISIFDQILKEDP YPEAL+GRGTA AFQREL +AI+DFT+AI+SNPSA EAW
Sbjct: 241  NEGNYSNAISIFDQILKEDPTYPEALVGRGTAYAFQRELSSAIADFTKAIESNPSACEAW 300

Query: 453  KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
            KRRGQARAALGES EAI+DL+KALEFEPNS DILHERGIVNFKFKDFNAAVEDLSACV+L
Sbjct: 301  KRRGQARAALGESSEAIEDLTKALEFEPNSTDILHERGIVNFKFKDFNAAVEDLSACVQL 360

Query: 513  DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
            DKENKSAYTYLGLALSSIGEYK+AEEAH+K+IQLD+NFLE W HLTQFYQDLAN  KALE
Sbjct: 361  DKENKSAYTYLGLALSSIGEYKRAEEAHMKSIQLDQNFLEGWAHLTQFYQDLANPTKALE 420

Query: 573  CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
            C+++VL ID+ F+KAYHLRGLL HG+G+HKKAI DLS GLGI+ SNIECLYLRASCYHAI
Sbjct: 421  CIERVLQIDEGFAKAYHLRGLLRHGMGEHKKAITDLSIGLGIENSNIECLYLRASCYHAI 480

Query: 633  GEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPL 692
            GEY EAIKDYD AL LELDSMEKFVLQCLAFYQKE+ALY ASK+N EFCWFDID DI+PL
Sbjct: 481  GEYGEAIKDYDKALTLELDSMEKFVLQCLAFYQKELALYAASKMNVEFCWFDIDRDINPL 540

Query: 693  FKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIGKKIQY 752
            FKEYWCKRLHPK+V E V+RQP    SLKK K R+QDF+VTKQK ALL  ADSIGKKIQY
Sbjct: 541  FKEYWCKRLHPKHVSENVFRQP----SLKKNKHRKQDFAVTKQKAALLHAADSIGKKIQY 596

Query: 753  DCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIA 812
            +CPGFL NRRQHRMAGLAAIEIAQKVSK WRSLQ E    NR++SK+GK+ARRK++IN  
Sbjct: 597  NCPGFLPNRRQHRMAGLAAIEIAQKVSKAWRSLQVE---RNRNTSKHGKKARRKEKINTP 653

Query: 813  SQNRGGAGC-STSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVN 871
            S NRGGAGC ++SSS  ++SY ITE+RSSG P MSW DVY+LAVKWRQISEPCDPVVWVN
Sbjct: 654  SLNRGGAGCSTSSSSETSTSYSITEDRSSGRPMMSWHDVYSLAVKWRQISEPCDPVVWVN 713

Query: 872  KLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDLSED 931
            KLSEEFNSGFGSHTP+ILGQAKVVRYFPNY RTLDVAKTVMK+K+YVHNKADDI+ LSED
Sbjct: 714  KLSEEFNSGFGSHTPLILGQAKVVRYFPNYQRTLDVAKTVMKEKRYVHNKADDIMYLSED 773

Query: 932  -----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRT 974
                             +VGEDFWLATWCNSTA EGK+LEGTRITL+KMGE G+DFAIRT
Sbjct: 774  GKLQEIMHAESCSDLYKIVGEDFWLATWCNSTAIEGKRLEGTRITLLKMGEHGFDFAIRT 833

Query: 975  PCTPSRWDEFDAEMTMAWEVDWEAILNSDPHF-----FLDSVKSWLYPSLKTSTSWKEYP 1029
            PCTPSRWD+FD EM +AW+    A      +       L++V+  +   L+ +  W  + 
Sbjct: 834  PCTPSRWDDFDTEMAVAWDALCNAYCGEKTYGSTNFDMLENVRDAI---LRMTYYWYNFM 890

Query: 1030 DVTSTFATTGSVV 1042
             ++   A  G VV
Sbjct: 891  PLSRGTAAVGFVV 903



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 51/68 (75%), Positives = 57/68 (83%)

Query: 983  EFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVV 1042
            EF   +   ++VDWEAILN +P  FLDSVKSWLYPSLK +TSWKEYPDV STF+TTGSVV
Sbjct: 914  EFTGSIPKDFQVDWEAILNLEPDSFLDSVKSWLYPSLKVTTSWKEYPDVASTFSTTGSVV 973

Query: 1043 AALSSYDD 1050
            AALSSYDD
Sbjct: 974  AALSSYDD 981


>gi|356514306|ref|XP_003525847.1| PREDICTED: tetratricopeptide repeat protein 13-like [Glycine max]
          Length = 1050

 Score = 1079 bits (2790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/795 (68%), Positives = 642/795 (80%), Gaps = 19/795 (2%)

Query: 266  ASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNS 325
            A+ D SE    S+D+ D+ +   D+   + +   Q NG+ DV D LS +S S NDS+  S
Sbjct: 178  ATGDKSETCLNSADNSDLKHESHDEDRDSNKSDGQVNGSPDVLDILSYNSESCNDSSDAS 237

Query: 326  ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
            ES  K S +   SS+  E       K+    E   EA++NKKFC+ +IS + SISVDFRL
Sbjct: 238  ESSEKVSTNSGDSSNIPEIFRNPISKFIFSDERKGEARKNKKFCIAQISNTNSISVDFRL 297

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            SRGIA+VNEGKYA AISIFDQILK+DP YPEALIGRGTA AFQREL+AAI+DFT+AIQ N
Sbjct: 298  SRGIAEVNEGKYAHAISIFDQILKKDPAYPEALIGRGTAYAFQRELDAAIADFTKAIQFN 357

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P AGEAWKRRGQARAALGE VEAI+DL+KALEFEP++ADILHERGIVNFKFK+F+AAVED
Sbjct: 358  PLAGEAWKRRGQARAALGEFVEAIEDLTKALEFEPDTADILHERGIVNFKFKEFDAAVED 417

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            LSACVKLDK+N SAYTYLGLALSSIGEYKKAEEAHLK++QLD+NFLEAW HLTQFYQDLA
Sbjct: 418  LSACVKLDKDNTSAYTYLGLALSSIGEYKKAEEAHLKSLQLDKNFLEAWAHLTQFYQDLA 477

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
               KA EC+ ++L ID RF++A HLRGLL H +G+H+KAIKDL+ GL ID SNIECLYLR
Sbjct: 478  KPTKAQECINKMLQIDGRFARANHLRGLLFHAMGEHRKAIKDLTMGLSIDGSNIECLYLR 537

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            ASCYHA+G+Y+EA+KDYDAALDLELDSM+KFVLQCLAFYQKEIALYTASK N +FCWFDI
Sbjct: 538  ASCYHAVGQYKEAVKDYDAALDLELDSMDKFVLQCLAFYQKEIALYTASKFNGDFCWFDI 597

Query: 686  DGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADS 745
            DGDID LFKEYWCK+LHPKNVCEKV+RQPPLR+SL+KGKL++Q+F++TKQK +LL  +DS
Sbjct: 598  DGDIDALFKEYWCKKLHPKNVCEKVFRQPPLRESLRKGKLKKQEFTITKQKASLLQASDS 657

Query: 746  IGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARR 805
            IG KIQYDCPGFL NRRQHRMAGLAAIEIAQKVSK WRSL AEWKYSN+ +SKNG+RARR
Sbjct: 658  IGMKIQYDCPGFLPNRRQHRMAGLAAIEIAQKVSKAWRSLHAEWKYSNKGNSKNGRRARR 717

Query: 806  KDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCD 865
            ++RIN+ SQNRGGAGCSTSS+S TSS G  ++R S    +SW +VY+LAV+WRQISEPCD
Sbjct: 718  RERINMPSQNRGGAGCSTSSTSVTSSNGTVDDRLSSR-TLSWHNVYSLAVRWRQISEPCD 776

Query: 866  PVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDI 925
            PVVWVNKLS+EFN+GFGSHTPMILGQAKVVRYFPNY RTL++AKTVMK++ +VH+K D I
Sbjct: 777  PVVWVNKLSDEFNAGFGSHTPMILGQAKVVRYFPNYERTLEIAKTVMKERSFVHSKTDKI 836

Query: 926  IDLSED-----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGY 968
            I LS+D                 VVGEDFWLATWCNSTAFEGKQLEGTRI LVKMGE G+
Sbjct: 837  IHLSKDGKLEEIMHAKLCSDLYKVVGEDFWLATWCNSTAFEGKQLEGTRINLVKMGEHGF 896

Query: 969  DFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSD-PHFFLDSVKSWLYPSLKTSTSWKE 1027
            DFAI+TPCTP+RW++FD EM +AWE    A    +      D++++ L   L+ +  W  
Sbjct: 897  DFAIKTPCTPARWEDFDEEMAVAWETLCNAYCGENYGSTDFDTLENVLDAILRMTYYWYN 956

Query: 1028 YPDVTSTFATTGSVV 1042
            +  ++   A  G +V
Sbjct: 957  FMPLSRGSAVVGFIV 971



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 57/69 (82%), Gaps = 1/69 (1%)

Query: 983  EFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVV 1042
            EF   +   ++VDWEAILN DP+ F+DSVK+WLYPSLK +TSWK+YPD+ STFATTGSV+
Sbjct: 982  EFTGSIPQGFQVDWEAILNLDPNSFVDSVKTWLYPSLKVTTSWKDYPDIASTFATTGSVI 1041

Query: 1043 AALS-SYDD 1050
            +AL+ S DD
Sbjct: 1042 SALNFSSDD 1050


>gi|26449774|dbj|BAC42010.1| unknown protein [Arabidopsis thaliana]
 gi|29029044|gb|AAO64901.1| At4g37460 [Arabidopsis thaliana]
          Length = 883

 Score = 1078 bits (2789), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/944 (59%), Positives = 691/944 (73%), Gaps = 94/944 (9%)

Query: 34  ASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCD 93
           A+A + R ELAK CS RNWSKAIR+LDSLLA+   I DICNRAFCY+QLELHKHVI+DCD
Sbjct: 4   ATATSERFELAKHCSSRNWSKAIRVLDSLLAKESSILDICNRAFCYNQLELHKHVIKDCD 63

Query: 94  KALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAA 153
           KAL L+P  +QA+ILKG A  ALGRK+EA+ V E+GY+ AL Q+AD+KQ LELEELL  A
Sbjct: 64  KALLLEPFAIQAFILKGRALLALGRKQEAVLVLEQGYKSALQQTADVKQLLELEELLKDA 123

Query: 154 KQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSK 213
           +++        +   + S        +A +   ET   H  S+  D  S   D  E+ + 
Sbjct: 124 RRE--------IDGILKS--------HATESPQETPAYH--SEKSDEKSDKLDNHESGAS 165

Query: 214 SSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEI 273
           S       NG S E+                    E+ E        SK    S+ AS+ 
Sbjct: 166 S-------NGNSHESSS------------------ELGEQ-------SKIVSFSKVASKA 193

Query: 274 NRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNTN 324
           ++QS  + D+CNG + K   N + G Q NG +         D+HD L+  S    + + N
Sbjct: 194 SKQSDGNSDLCNGSVYKEKENGKCGSQINGYYESCKPCNGSDLHDNLAESSDRFGELSIN 253

Query: 325 SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
               +K SI  +K S   E+R  +S          +E+++NKK+ + RIS + SISVDFR
Sbjct: 254 G---NKISIKSSKMSHKAEARCGIS----------DESRKNKKYTIARISGTHSISVDFR 300

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           LSRGIAQVNEG Y  AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQS
Sbjct: 301 LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQS 360

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV+
Sbjct: 361 NPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVK 420

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+L
Sbjct: 421 DLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQEL 480

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
           A+  KALEC++QVL +D R  KAYHLRGL+ HGLG+H+KAI++LS GL I+ + IECLYL
Sbjct: 481 ADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIGLSIE-NTIECLYL 539

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           R SCYHA+GEYR+A+KDYDA +D+ELD++EKFVLQCLAFYQKE+ALYTASK++SEF  FD
Sbjct: 540 RGSCYHAVGEYRDAVKDYDATVDVELDAVEKFVLQCLAFYQKELALYTASKVSSEFLCFD 599

Query: 685 IDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVAD 744
           IDGDIDP+FKEYWCKRLHPKNVCEKVYRQPPLR+SLKKGKL++QD ++TKQK  +L  AD
Sbjct: 600 IDGDIDPMFKEYWCKRLHPKNVCEKVYRQPPLRESLKKGKLKKQDLAITKQKANILRFAD 659

Query: 745 SIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRAR 804
            IGK+IQYDCPGFL N+RQHRMAGLA IEIAQKVSK WR    EW+ S + ++KNGK+ R
Sbjct: 660 LIGKRIQYDCPGFLPNKRQHRMAGLAVIEIAQKVSKAWR---IEWRNSTKGTTKNGKKNR 716

Query: 805 RKDRINIASQNRGGAGC-STSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEP 863
           R++R NI SQNRGGAGC S+S S  ++ Y   E+RSSG   +SWQDVY+ AV+WRQISEP
Sbjct: 717 RRERTNILSQNRGGAGCSSSSFSETSTGYASLEDRSSGRSILSWQDVYSPAVRWRQISEP 776

Query: 864 CDPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKAD 923
           CDPVVWVNKLSEEFNSGFGSHTPM+LGQAKVVRYFPNY RTL +AK+++KDK  V +K D
Sbjct: 777 CDPVVWVNKLSEEFNSGFGSHTPMVLGQAKVVRYFPNYERTLTLAKSIIKDKLSVRSKKD 836

Query: 924 DIIDLSED-----------------VVGEDFWLATWCNSTAFEG 950
            +IDLS+D                 +VGEDFW+ATWC+ST  EG
Sbjct: 837 KVIDLSKDEKIEKIMRAETCDELHNIVGEDFWVATWCDSTGSEG 880


>gi|4468812|emb|CAB38213.1| putative protein [Arabidopsis thaliana]
 gi|7270728|emb|CAB80411.1| putative protein [Arabidopsis thaliana]
          Length = 1013

 Score = 1066 bits (2756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1104 (53%), Positives = 734/1104 (66%), Gaps = 181/1104 (16%)

Query: 34   ASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCD 93
            A+A + R ELAK CS RNWSKAIR+LDSLLA+   I DICNRAFCY+QLELHKHVI+DCD
Sbjct: 4    ATATSERFELAKHCSSRNWSKAIRVLDSLLAKESSILDICNRAFCYNQLELHKHVIKDCD 63

Query: 94   KALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAA 153
            KAL L+P  +QA+ILKG A  ALGRK+EA+ V E+GY+ AL Q+AD+KQ LELEELL  A
Sbjct: 64   KALLLEPFAIQAFILKGRALLALGRKQEAVLVLEQGYKSALQQTADVKQLLELEELLKDA 123

Query: 154  KQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSK 213
            +++        +   + S        +A +   ET   H  S+  D  S   D  E+ + 
Sbjct: 124  RRE--------IDGILKS--------HATESPQETPAYH--SEKSDEKSDKLDNHESGAS 165

Query: 214  SSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEI 273
            S       NG S E+                    E+ E        SK    S+ AS+ 
Sbjct: 166  S-------NGNSHESSS------------------ELGEQ-------SKIVSFSKVASKA 193

Query: 274  NRQSSDDFDICNGPIDKASVNERHGRQTNGTH---------DVHDKLSSDSASLNDSNTN 324
            ++QS  + D+CNG + K   N + G Q NG +         D+HD L+  S    + + N
Sbjct: 194  SKQSDGNSDLCNGSVYKEKENGKCGSQINGYYESCKPCNGSDLHDNLAESSDRFGELSIN 253

Query: 325  SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
                +K SI  +K S   E+R  +S          +E+++NKK+ + RIS + SISVDFR
Sbjct: 254  G---NKISIKSSKMSHKAEARCGIS----------DESRKNKKYTIARISGTHSISVDFR 300

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            LSRGIAQVNEG Y  AISIFD++LKE+P YPEALIGRGTA AFQRELE+AI+DFT+AIQS
Sbjct: 301  LSRGIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQS 360

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            NP+A EAWKRRGQARAALGE VEA++DL+KAL FEPNS D+LHERGIVNFK KDF AAV+
Sbjct: 361  NPAASEAWKRRGQARAALGEYVEAVEDLTKALVFEPNSPDVLHERGIVNFKSKDFTAAVK 420

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            DLS C+K +K+NKSAYTYLGLA +S+GEYKKAEEAHLK+IQLD N+LEAW HL QFYQ+L
Sbjct: 421  DLSICLKQEKDNKSAYTYLGLAFASLGEYKKAEEAHLKSIQLDSNYLEAWLHLAQFYQEL 480

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            A+  KALEC++QVL +D R  KAYHLRGL+ HGLG+H+KAI++LS GL I+ + IECLYL
Sbjct: 481  ADHCKALECIEQVLQVDNRVWKAYHLRGLVFHGLGEHRKAIQELSIGLSIE-NTIECLYL 539

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
            R SCYHA+GEYR+A+KDYDA +D+ELD++EKFVLQCLAFYQKE+ALYTASK++SEF  FD
Sbjct: 540  RGSCYHAVGEYRDAVKDYDATVDVELDAVEKFVLQCLAFYQKELALYTASKVSSEFLCFD 599

Query: 685  IDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVAD 744
            IDGDIDP+FK                           KGKL++QD ++TKQK  +L  AD
Sbjct: 600  IDGDIDPMFK---------------------------KGKLKKQDLAITKQKANILRFAD 632

Query: 745  SIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRAR 804
             IGK+IQYDCPGFL N+RQHRMAGLA IEIAQKVSK WR    EW+ S + ++KNGK+ R
Sbjct: 633  LIGKRIQYDCPGFLPNKRQHRMAGLAVIEIAQKVSKAWR---IEWRNSTKGTTKNGKKNR 689

Query: 805  RKDRINIASQNRGGAGCSTSSSSDTS-SYGITEERSSGHPKMSWQDVYTLAVKWRQISEP 863
            R++R NI SQNRGGAGCS+SS S+TS  Y   E+RSSG   +SWQDVY+ AV+WRQISEP
Sbjct: 690  RRERTNILSQNRGGAGCSSSSFSETSTGYASLEDRSSGRSILSWQDVYSPAVRWRQISEP 749

Query: 864  CDPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKAD 923
            CDPVVWVNKLSEEFNSGFGSHTPM+LGQAKVVRYFPNY RTL +AK+++KDK  V +K D
Sbjct: 750  CDPVVWVNKLSEEFNSGFGSHTPMVLGQAKVVRYFPNYERTLTLAKSIIKDKLSVRSKKD 809

Query: 924  DIIDLSED-------------------VVGEDFWLATWCNSTAFEGKQ------------ 952
             +IDLS+D                   +VGEDFW+ATWC+ST  EG +            
Sbjct: 810  KVIDLSKDEKIEKMQIMRAETCDELHNIVGEDFWVATWCDSTGSEGGRLGYDFSIRTPCT 869

Query: 953  ----------------------------------LEGTRITLVKM------------GES 966
                                              LE  R  +++M            G +
Sbjct: 870  PARWSDFDEEMTSAWEALCTAYCGENYGSTELDALETVRDAILRMTYYWYNFMPLARGTA 929

Query: 967  GYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWK 1026
               F +      +   EF   +    ++DWEAILN +P  F+DSVKSWLYPSLK +TSW+
Sbjct: 930  VTGFVVLLGLLLAANMEFTETIPKGLQIDWEAILNVEPGSFVDSVKSWLYPSLKINTSWR 989

Query: 1027 EYPDVTSTFATTGSVVAALSSYDD 1050
            ++ +++S F+TTG+VVAALS+Y+D
Sbjct: 990  DHTEISSAFSTTGAVVAALSTYND 1013


>gi|115470301|ref|NP_001058749.1| Os07g0113700 [Oryza sativa Japonica Group]
 gi|33147009|dbj|BAC80093.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
            Japonica Group]
 gi|34393726|dbj|BAC83208.1| tetratricopeptide repeat(TPR)-containing protein-like [Oryza sativa
            Japonica Group]
 gi|113610285|dbj|BAF20663.1| Os07g0113700 [Oryza sativa Japonica Group]
 gi|218198988|gb|EEC81415.1| hypothetical protein OsI_24660 [Oryza sativa Indica Group]
          Length = 1011

 Score =  899 bits (2324), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/684 (64%), Positives = 524/684 (76%), Gaps = 36/684 (5%)

Query: 381  VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            +DFRLSRGIAQVNEG+Y  AISIFDQIL+E P YPEALIGRGTA AFQREL++AISDFT+
Sbjct: 264  LDFRLSRGIAQVNEGRYDQAISIFDQILRETPTYPEALIGRGTAYAFQRELDSAISDFTK 323

Query: 441  AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            AIQSNPSAGEAWKRRGQARAALGE  EA++DL+KALEFEPNS DILHERGIVNFKFKD+N
Sbjct: 324  AIQSNPSAGEAWKRRGQARAALGEFTEAVEDLTKALEFEPNSPDILHERGIVNFKFKDYN 383

Query: 501  AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            AAVEDLS CVK DK+N SA+TYLGL LS++GEYK+AE+ HL  I+ D NFL++W HL+Q 
Sbjct: 384  AAVEDLSTCVKRDKKNSSAHTYLGLTLSALGEYKRAEDEHLLGIKYDENFLDSWAHLSQL 443

Query: 561  YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            Y D+   EK L  +++VL ID  F KAYHLRG+L HG+G+H+ AIKDLS  L  + SNIE
Sbjct: 444  YLDIGCPEKMLNNVEKVLQIDVSFGKAYHLRGILYHGMGRHRSAIKDLSVALKHESSNIE 503

Query: 621  CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEF 680
            CLYLRASC+HAIGEY+ AIKDYD  LDLELDSM+KFVLQCLAFYQKEIALYTASK N EF
Sbjct: 504  CLYLRASCHHAIGEYKAAIKDYDDVLDLELDSMDKFVLQCLAFYQKEIALYTASKANLEF 563

Query: 681  CWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALL 740
              F+ID D+DPLFKEYWCKRLHPKNV EKVYRQPPLR SL+ G+L +QDF  TK +T L+
Sbjct: 564  SQFNIDDDVDPLFKEYWCKRLHPKNVAEKVYRQPPLRISLRSGRLNKQDFKFTKHQTTLI 623

Query: 741  LVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNG 800
            L ADSIGKKIQY+C GFL N+RQ+RMAGLAAIEIAQKVSK WR L        R+   N 
Sbjct: 624  LAADSIGKKIQYNCRGFLPNQRQYRMAGLAAIEIAQKVSKAWRFL--------RNPKNNA 675

Query: 801  KRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQI 860
            K  RR+D++N A QNRGG  CSTS+ S + +    E+R S    +SW DVY +AVKWRQI
Sbjct: 676  KLVRRRDKLN-ACQNRGGY-CSTSTLSGSPTSSPNEDRISSGISLSWHDVYNIAVKWRQI 733

Query: 861  SEPCDPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHN 920
            SEPCDPVVW+NKLSEEFNSGFGSHTPM+LGQAK++RY+P Y   L+ AK +M D KYV+N
Sbjct: 734  SEPCDPVVWINKLSEEFNSGFGSHTPMLLGQAKIIRYYPYYQSVLEAAKNIMLDLKYVNN 793

Query: 921  KADDIIDLSE-----------------DVVGEDFWLATWCNSTAFEGKQLEGTRITLVKM 963
              D  I L++                  +VGE +W++T C+S AF+G++LEGTRIT   M
Sbjct: 794  AEDRAIFLTDIEKLKKIEVASSCSELYHIVGETYWVSTRCDSIAFQGRRLEGTRITTQNM 853

Query: 964  GESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNS-----DPHFFLDSVKSWLYPS 1018
            G++G+DFAIRTPCTPSRW+E+D EM+ AWE   EA  +      DP   LD+VK+ +   
Sbjct: 854  GKTGFDFAIRTPCTPSRWEEYDEEMSAAWEAICEAYCSDTNPTRDPD-MLDAVKAAI--- 909

Query: 1019 LKTSTSWKEYPDVTSTFATTGSVV 1042
            L+ +  W  +  ++   A  G VV
Sbjct: 910  LRMTYYWYNFMPLSRGSAVVGYVV 933



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 47/64 (73%)

Query: 986  AEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVVAAL 1045
            A +    +VDWEAIL+ DP  F+D +K WLYPS+KTS + K+Y DV+  F+TTGSVVAAL
Sbjct: 947  ASIPHGVQVDWEAILSQDPDTFVDKIKPWLYPSIKTSRNLKDYADVSVAFSTTGSVVAAL 1006

Query: 1046 SSYD 1049
            +  D
Sbjct: 1007 TCVD 1010


>gi|357111747|ref|XP_003557673.1| PREDICTED: tetratricopeptide repeat protein 13-like [Brachypodium
            distachyon]
          Length = 1002

 Score =  895 bits (2314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/684 (64%), Positives = 532/684 (77%), Gaps = 36/684 (5%)

Query: 381  VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            +DFRLSRGIAQVNEG+Y  AISIFDQIL+E P YPEALIGRGTA AFQREL++AISDFT+
Sbjct: 255  LDFRLSRGIAQVNEGRYDQAISIFDQILRETPTYPEALIGRGTAYAFQRELDSAISDFTK 314

Query: 441  AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            AIQSNP AGEAWKRRGQARAALGE VEAI+DL+KALEFEP+S DILHERGIV+FKFKD+N
Sbjct: 315  AIQSNPLAGEAWKRRGQARAALGEFVEAIEDLTKALEFEPDSPDILHERGIVSFKFKDYN 374

Query: 501  AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            +AVEDLS CVK DK+N SA+TYLGL LS++GEYK+AE+ HL  I+ D +FL++W HL+Q 
Sbjct: 375  SAVEDLSTCVKRDKKNSSAHTYLGLTLSAVGEYKRAEDEHLLGIKYDGSFLDSWAHLSQL 434

Query: 561  YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            Y DLA  EK L  L++VL ID RFSKAYHLRG+L HG+G+H+ AIK+LS  L  D S+IE
Sbjct: 435  YLDLAYPEKMLNNLEKVLQIDSRFSKAYHLRGILYHGMGRHRSAIKELSIALTYDSSSIE 494

Query: 621  CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEF 680
            CLYLRASC+HA+GEY+ AIKDYD  LDLELDSM+KFVLQCLAFYQKE+ALYTASK N EF
Sbjct: 495  CLYLRASCHHAVGEYKAAIKDYDDVLDLELDSMDKFVLQCLAFYQKEMALYTASKANLEF 554

Query: 681  CWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALL 740
              F+ID D+D LFKEYWCKRLHPKNV EKVYRQPPLR SL+ G+L +QDF  TK +T+LL
Sbjct: 555  SQFNIDDDVDALFKEYWCKRLHPKNVAEKVYRQPPLRISLRSGRLNKQDFKFTKHQTSLL 614

Query: 741  LVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNG 800
            L ADSIGKKIQYDC GFL N+RQ+RMAGLAAIEIAQKVSK WR L        R+   + 
Sbjct: 615  LAADSIGKKIQYDCRGFLPNQRQYRMAGLAAIEIAQKVSKAWRFL--------RNPKNSA 666

Query: 801  KRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQI 860
            K  RR+D++N+ S NRGG  CSTS+ + + +   +EE+ S    +SWQDVY +AVKWRQI
Sbjct: 667  KLVRRRDKLNL-SVNRGGY-CSTSTLAGSPTSSPSEEKVSSGISLSWQDVYNIAVKWRQI 724

Query: 861  SEPCDPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHN 920
            SEPCDPVVWVNKLSEEFNSGFGSHTP++LGQAK+VRY+P Y RTL+ AK +M D KYV+N
Sbjct: 725  SEPCDPVVWVNKLSEEFNSGFGSHTPLLLGQAKIVRYYPYYLRTLEAAKAIMLDLKYVNN 784

Query: 921  KADDIIDLSE-----------------DVVGEDFWLATWCNSTAFEGKQLEGTRITLVKM 963
              D  I L++                 ++VGE +W+AT C+S AF+G++LEGTRIT   +
Sbjct: 785  AEDRAIFLTDIEKLKKIEVASSCSDLYNIVGETYWVATRCDSIAFQGRRLEGTRITTQNV 844

Query: 964  GESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHFF-----LDSVKSWLYPS 1018
            G++G+DFAIRTPCTPSRW+E+  EMT AWE   E I  SDP+       LD+VK+ +   
Sbjct: 845  GKTGFDFAIRTPCTPSRWEEYQEEMTAAWEAICE-IYCSDPNPTRDSNALDAVKAAI--- 900

Query: 1019 LKTSTSWKEYPDVTSTFATTGSVV 1042
            L+ +  W  +  ++   +  G VV
Sbjct: 901  LRMTYYWYNFMPLSRGTSAVGYVV 924



 Score =  155 bits (393), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/211 (47%), Positives = 135/211 (63%), Gaps = 18/211 (8%)

Query: 40  RIELAKLCSLRNWSKAIRILDSLLAQS-YEIQDICNRAFCYSQLELHKHVIRDCDKALQL 98
           R ELA+LCS RNWSKAIR+LD+LLA+S   I D+CNRAFCYSQLELHKHV++DCD+ALQL
Sbjct: 5   RGELARLCSGRNWSKAIRLLDALLARSPSSIHDLCNRAFCYSQLELHKHVVKDCDRALQL 64

Query: 99  DPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS 158
           DPTLL AY+LKG A  ALG+KEEAL  W++G+  A   + DLKQ LELEEL+++ K   +
Sbjct: 65  DPTLLHAYVLKGKALCALGKKEEALVAWDQGHGIAARDTIDLKQLLELEELVSSVKICET 124

Query: 159 VTCE--YDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSH 216
           V  E   D+S   + + +SE  + A       +    KS +C+ + ++       SK S 
Sbjct: 125 VEREGVVDLSPCDTKVVISEDCVAA-------TTTDTKSVVCEDNIEN-------SKDSS 170

Query: 217 DPDLCNGRSDEAKGGSSVPVS-KSGLHINGK 246
           + D+    S +    SS P +  +G H N K
Sbjct: 171 NGDMTLPNSCKDHKDSSSPANDATGTHPNPK 201



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 49/67 (73%)

Query: 983  EFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVV 1042
            +  A +    +VDWEA+L+SDP  F+D+VK WLYPS+K S S K+Y D++  F TTGSV+
Sbjct: 935  DITASIPPGVQVDWEALLSSDPDTFVDAVKPWLYPSVKMSKSLKDYADISVAFGTTGSVI 994

Query: 1043 AALSSYD 1049
            AAL+S D
Sbjct: 995  AALTSVD 1001


>gi|125598900|gb|EAZ38476.1| hypothetical protein OsJ_22864 [Oryza sativa Japonica Group]
          Length = 955

 Score =  817 bits (2111), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/686 (59%), Positives = 494/686 (72%), Gaps = 63/686 (9%)

Query: 379  ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
            I +   LS  +A VNEG+Y  AISIFDQIL+E P YPEALIGRGTA AFQREL++AISDF
Sbjct: 233  IILTIGLSNSMASVNEGRYDQAISIFDQILRETPTYPEALIGRGTAYAFQRELDSAISDF 292

Query: 439  TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
            T+A++                           DL+KALEFEPNS DILHERGIVNFKFKD
Sbjct: 293  TKAVE---------------------------DLTKALEFEPNSPDILHERGIVNFKFKD 325

Query: 499  FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
            +NAAVEDLS CVK DK+N SA+TYLGL LS++GEYK+AE+ HL  I+ D NFL++W HL+
Sbjct: 326  YNAAVEDLSTCVKRDKKNSSAHTYLGLTLSALGEYKRAEDEHLLGIKYDENFLDSWAHLS 385

Query: 559  QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            Q Y D+   EK L  +++VL ID  F KAYHLRG+L HG+G+H+ AIKDLS  L  + SN
Sbjct: 386  QLYLDIGCPEKMLNNVEKVLQIDVSFGKAYHLRGILYHGMGRHRSAIKDLSVALKHESSN 445

Query: 619  IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
            IECLYLRASC+HAIGEY+ AIKDYD  LDLELDSM+KFVLQCLAFYQKEIALYTASK N 
Sbjct: 446  IECLYLRASCHHAIGEYKAAIKDYDDVLDLELDSMDKFVLQCLAFYQKEIALYTASKANL 505

Query: 679  EFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA 738
            EF  F+ID D+DPLFKEYWCKRLHPKNV EKVYRQPPLR SL+ G+L +QDF  TK +T 
Sbjct: 506  EFSQFNIDDDVDPLFKEYWCKRLHPKNVAEKVYRQPPLRISLRSGRLNKQDFKFTKHQTT 565

Query: 739  LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSK 798
            L+L ADSIGKKIQY+C GFL N+RQ+RMAGLAAIEIAQKVSK WR L        R+   
Sbjct: 566  LILAADSIGKKIQYNCRGFLPNQRQYRMAGLAAIEIAQKVSKAWRFL--------RNPKN 617

Query: 799  NGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWR 858
            N K  RR+D++N A QNRGG  CSTS+ S + +    E+R S    +SW DVY +AVKWR
Sbjct: 618  NAKLVRRRDKLN-ACQNRGGY-CSTSTLSGSPTSSPNEDRISSGISLSWHDVYNIAVKWR 675

Query: 859  QISEPCDPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYV 918
            QISEPCDPVVW+NKLSEEFNSGFGSHTPM+LGQAK++RY+P Y   L+ AK +M D KYV
Sbjct: 676  QISEPCDPVVWINKLSEEFNSGFGSHTPMLLGQAKIIRYYPYYQSVLEAAKNIMLDLKYV 735

Query: 919  HNKADDIIDLSE-----------------DVVGEDFWLATWCNSTAFEGKQLEGTRITLV 961
            +N  D  I L++                  +VGE +W++T C+S AF+G++LEGTRIT  
Sbjct: 736  NNAEDRAIFLTDIEKLKKIEVASSCSELYHIVGETYWVSTRCDSIAFQGRRLEGTRITTQ 795

Query: 962  KMGESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNS-----DPHFFLDSVKSWLY 1016
             MG++G+DFAIRTPCTPSRW+E+D EM+ AWE   EA  +      DP   LD+VK+ + 
Sbjct: 796  NMGKTGFDFAIRTPCTPSRWEEYDEEMSAAWEAICEAYCSDTNPTRDPD-MLDAVKAAI- 853

Query: 1017 PSLKTSTSWKEYPDVTSTFATTGSVV 1042
              L+ +  W  +  ++   A  G VV
Sbjct: 854  --LRMTYYWYNFMPLSRGSAVVGYVV 877



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/164 (53%), Positives = 120/164 (73%), Gaps = 5/164 (3%)

Query: 40  RIELAKLCSLRNWSKAIRILDSLLAQS-YEIQDICNRAFCYSQLELHKHVIRDCDKALQL 98
           R ELA++C  RNWSKAIRILD+ LA+S   I D+CNRAFCYSQLELHKHV++DCD+AL+L
Sbjct: 5   RAELARVCGGRNWSKAIRILDAHLARSPSSIHDLCNRAFCYSQLELHKHVVKDCDRALEL 64

Query: 99  DPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS 158
           DP LLQAY+LKG A SALG++EEAL+VWE+G+E A+  + DLKQ LELEEL+++ K   +
Sbjct: 65  DPALLQAYVLKGKALSALGKREEALAVWEQGHEVAVRDTMDLKQLLELEELVSSVKICET 124

Query: 159 VTCE---YDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICD 199
           + CE    D S   + + +SE  +  +   + T+    K+ +C+
Sbjct: 125 IECEDRVVDASPCDTKVVISEDRV-VDTSCTATTMADTKTVVCE 167



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 36/64 (56%), Positives = 47/64 (73%)

Query: 986  AEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVVAAL 1045
            A +    +VDWEAIL+ DP  F+D +K WLYPS+KTS + K+Y DV+  F+TTGSVVAAL
Sbjct: 891  ASIPHGVQVDWEAILSQDPDTFVDKIKPWLYPSIKTSRNLKDYADVSVAFSTTGSVVAAL 950

Query: 1046 SSYD 1049
            +  D
Sbjct: 951  TCVD 954


>gi|224071279|ref|XP_002303386.1| predicted protein [Populus trichocarpa]
 gi|222840818|gb|EEE78365.1| predicted protein [Populus trichocarpa]
          Length = 583

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/447 (79%), Positives = 392/447 (87%), Gaps = 19/447 (4%)

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           +ANS KAL+C+ QVL ID RF+KAYHLRGLLL+G+G+H+KAIKDLS GL I+ +NIE LY
Sbjct: 1   MANSTKALDCINQVLQIDSRFAKAYHLRGLLLYGMGEHRKAIKDLSIGLSIENANIESLY 60

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWF 683
           LRASCYHAIGEY EA+KDYDA LDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWF
Sbjct: 61  LRASCYHAIGEYGEAVKDYDATLDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWF 120

Query: 684 DIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVA 743
           DIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLR+QDF+ TKQK ALL  A
Sbjct: 121 DIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRKQDFATTKQKIALLAAA 180

Query: 744 DSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRA 803
           DSIG+KIQYDC GFLSNRRQHRMAGLA IEIAQKV+K WRSLQ EWK+SN+S+SK GKR 
Sbjct: 181 DSIGQKIQYDCYGFLSNRRQHRMAGLAIIEIAQKVAKAWRSLQNEWKHSNKSTSKYGKRV 240

Query: 804 RRKDRINIASQNRGGAGC-STSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISE 862
           RR  RINI SQNRGGAGC ++SSS  T+SYG+ E+RSSG   MSW+DVY++AVKWRQISE
Sbjct: 241 RR--RINIPSQNRGGAGCSTSSSSETTTSYGVLEDRSSGRSTMSWKDVYSMAVKWRQISE 298

Query: 863 PCDPVVWVNKLSEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKA 922
           PCDPV+WVNKLSEEFNSGFGSHTPMILGQAKV+RY+ NY RT DVAKT+MKDK +VHNK+
Sbjct: 299 PCDPVIWVNKLSEEFNSGFGSHTPMILGQAKVIRYYQNYERTFDVAKTIMKDKLFVHNKS 358

Query: 923 DDIIDLSED----------------VVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGES 966
           D+II L ED                VVGEDFWLAT C+STAFE KQLEGTRITLVKMGE 
Sbjct: 359 DNIIGLPEDKIQAIIDAKNCTDLYNVVGEDFWLATLCSSTAFEEKQLEGTRITLVKMGEG 418

Query: 967 GYDFAIRTPCTPSRWDEFDAEMTMAWE 993
           G+DFAIRTPCTPSRWD+FDAEMTMAWE
Sbjct: 419 GFDFAIRTPCTPSRWDDFDAEMTMAWE 445



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 56/68 (82%)

Query: 983  EFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVV 1042
            EF  ++    +VDWEAILN DP+ F +SVK WLYPSLK +TSWK+YPDVTST ATTGSVV
Sbjct: 506  EFTGKIPKGIQVDWEAILNFDPNSFAESVKRWLYPSLKITTSWKDYPDVTSTLATTGSVV 565

Query: 1043 AALSSYDD 1050
            AALSSYDD
Sbjct: 566  AALSSYDD 573


>gi|224071273|ref|XP_002303385.1| predicted protein [Populus trichocarpa]
 gi|222840817|gb|EEE78364.1| predicted protein [Populus trichocarpa]
          Length = 526

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/529 (67%), Positives = 412/529 (77%), Gaps = 4/529 (0%)

Query: 33  MASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDC 92
           MASAI+ R+ELAKLCS R+WSKAIR+LDSLL QS  IQDICNRAFCYSQLELHKHVI+DC
Sbjct: 1   MASAISERVELAKLCSSRDWSKAIRVLDSLLVQSCAIQDICNRAFCYSQLELHKHVIKDC 60

Query: 93  DKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTA 152
           D+ALQLDPTLLQAYILKG AFS+LGRK++AL VWE+GYEHALHQSADLKQ LELEELL  
Sbjct: 61  DRALQLDPTLLQAYILKGRAFSSLGRKDDALLVWEQGYEHALHQSADLKQLLELEELLKF 120

Query: 153 AKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK-SDICDSSSQSRDVSETC 211
           AKQDRS  CE  V  S  S+  SES    + K  ETS++ NK SDI +  S SR+V    
Sbjct: 121 AKQDRSAGCETHVVESRLSMYASES--QPHSKSDETSKHQNKLSDISNLCSGSRNVLGIH 178

Query: 212 SKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDAS 271
           SKS  + ++  G SDE  G S   V +SG H N K  E S+N + +SD S+     RDA 
Sbjct: 179 SKSGDNFEIHKGISDEV-GRSLKLVPESGCHTNEKSSETSKNPSKASDKSELCSELRDAP 237

Query: 272 EINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKS 331
           EI  +S D+FD+ NG  DKA  N++ G   N  HD+ D  +  S S +  +  SE  S+ 
Sbjct: 238 EICCKSGDNFDMDNGLSDKAEGNQKPGILVNDNHDILDLPNHVSESCSGVSNASELSSRL 297

Query: 332 SISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQ 391
           S+      D++E  SK S K +M  E ++E K NKK CVTRISK+KSISVDFRLSRGIAQ
Sbjct: 298 SMIPGNLGDTSEILSKSSNKVNMHNEVTDETKGNKKLCVTRISKTKSISVDFRLSRGIAQ 357

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           VNEGKYA+AISIFDQILKEDP YPEALIGRGTARAF+REL +AI+DF++AI+SNPSAGEA
Sbjct: 358 VNEGKYATAISIFDQILKEDPTYPEALIGRGTARAFKRELGSAIADFSKAIESNPSAGEA 417

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           WKRRGQARAALGES EAI DL+KALEFEPNSADILHERGIV++KFKDF+AAVEDLSACVK
Sbjct: 418 WKRRGQARAALGESAEAINDLTKALEFEPNSADILHERGIVSYKFKDFDAAVEDLSACVK 477

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           LD +N SAYTYLGLALSSIGEYKKAEEAHLKAIQLDR+FLEAW HLTQF
Sbjct: 478 LDMDNMSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRSFLEAWAHLTQF 526



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 71/173 (41%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           S D    RGI       +  A+      +K D     A    G A +   E   A     
Sbjct: 346 SVDFRLSRGIAQVNEGKYATAISIFDQILKEDPTYPEALIGRGTARAFKRELGSAIADFS 405

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KAI+ + +  EAW    Q    L  S +A+  L + L  +   +   H RG++ +     
Sbjct: 406 KAIESNPSAGEAWKRRGQARAALGESAEAINDLTKALEFEPNSADILHERGIVSYKFKDF 465

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
             A++DLS+ + +D  N+           +IGEY++A + +  A+ L+   +E
Sbjct: 466 DAAVEDLSACVKLDMDNMSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRSFLE 518



 Score = 43.1 bits (100), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYI 580
           G+A  + G+Y  A     + ++ D  + EA    G    F ++L +   A+    + +  
Sbjct: 354 GIAQVNEGKYATAISIFDQILKEDPTYPEALIGRGTARAFKRELGS---AIADFSKAIES 410

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           +    +A+  RG     LG+  +AI DL+  L  +P++ + L+ R    +   ++  A++
Sbjct: 411 NPSAGEAWKRRGQARAALGESAEAINDLTKALEFEPNSADILHERGIVSYKFKDFDAAVE 470

Query: 641 DYDAALDLELDSMEKFVLQCLAF 663
           D  A + L++D+M  +    LA 
Sbjct: 471 DLSACVKLDMDNMSAYTYLGLAL 493


>gi|168025982|ref|XP_001765512.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683362|gb|EDQ69773.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 976

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 316/653 (48%), Positives = 439/653 (67%), Gaps = 43/653 (6%)

Query: 373  ISKSK----SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            +SKS+    S++VD +LS+GI QVN G Y  A++IF+ IL E+P    AL+GRGTA AF 
Sbjct: 223  VSKSRQNRLSVTVDMKLSKGIQQVNRGNYEEAVNIFNSILTENPKSCGALLGRGTAYAFM 282

Query: 429  RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            R+L+ AI+DF++AI+ +P   EAWKRRGQARAA GE  +A++DLS+A++ EP + D+LHE
Sbjct: 283  RKLQKAITDFSKAIEVDPKTTEAWKRRGQARAASGEIAQALEDLSRAVQLEP-TPDLLHE 341

Query: 489  RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            RG++NFK K+F AA+EDL  C+  D  NK AY YLGLALS+ G Y    +A  +A++LD 
Sbjct: 342  RGVINFKLKNFFAAIEDLKGCLAQDTHNKHAYNYLGLALSATGNYVDGIKAQRRAVELDN 401

Query: 549  NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             F E W HL Q Y++LA+SEKA+ECL++   IDK++  AY + G+LLHGLG+H+ A K L
Sbjct: 402  KFKEGWAHLAQSYKELADSEKAVECLKKATEIDKKYGGAYRIWGILLHGLGEHRNAAKLL 461

Query: 609  SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
            ++ L +D   +ECLYLR S + A+GE+  A+ DY + L++ELDS+E   LQ LAFYQKE 
Sbjct: 462  TTALELDADTMECLYLRGSTFQALGEFTNAVADYTSILEMELDSLENRTLQYLAFYQKEN 521

Query: 669  ALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQ 728
            +LYT +K++  F  FD+DGD++P+FKE WCKRL P         QP L+D   KG LR Q
Sbjct: 522  SLYTVTKLSQPFGRFDMDGDLNPIFKEAWCKRLPPDFYYHAYKPQPALKDR-SKGSLRLQ 580

Query: 729  DFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAE 788
            D ++TK K  LL  A +IG+ IQYD PGFL N RQ RMAG AAIEIAQKV+  WR++  +
Sbjct: 581  DTALTKSKKLLLDAAAAIGRLIQYDAPGFLKNVRQQRMAGFAAIEIAQKVAYTWRTMNEK 640

Query: 789  WKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGH-PKM-S 846
                 +S  K G++  RK+   + S  +GG                 +E + G  P M S
Sbjct: 641  RDEYFQSKEKAGRKTNRKNSSTVRSMKKGG-----------------QENNHGMDPFMSS 683

Query: 847  WQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTL 905
            W+DVY++AVKWRQISEPCD VVWV+ L ++EF +GFGSHTPM+LGQA+V+RY+ N+ R  
Sbjct: 684  WRDVYSIAVKWRQISEPCDSVVWVDLLNAKEFAAGFGSHTPMVLGQAQVIRYYANFERAF 743

Query: 906  DVAKTVMKDKKYVHNKADDIIDLSED-----------------VVGEDFWLATWCNSTAF 948
             + K ++ ++ YV++ A+D +++ +                   V +DFW+ T CNST  
Sbjct: 744  KIIKELIHERGYVNDAANDPVNMKDPAKLKEVDAAKDCSDLYKTVEKDFWVCTPCNSTHQ 803

Query: 949  EGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILN 1001
            EGK L+GTR+TL K+   G+DF+IRTP TP RW+++D E++ AW+   +A  N
Sbjct: 804  EGKVLDGTRLTLQKLDSQGFDFSIRTPGTPLRWEDYDVELSAAWQALCDAYCN 856



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 74/114 (64%), Gaps = 1/114 (0%)

Query: 47  CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
           C  + WSKAIRI+ SL  ++     + NRA+CYS+LELHKHVI+D D+A+ ++P+ LQAY
Sbjct: 20  CKKKEWSKAIRIISSL-PETTNSHLLLNRAWCYSKLELHKHVIKDADRAIAINPSTLQAY 78

Query: 107 ILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVT 160
           + KG A +AL +  EA  VW+KGYE AL    +L   ++L  L    ++  S T
Sbjct: 79  LYKGQALAALKKHVEACQVWQKGYESALGLPEELPFVVQLHSLAMGLEKANSDT 132



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 38/58 (65%)

Query: 992  WEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVVAALSSYD 1049
            ++VDWEAIL+ +   F  +VK WL       T W+  PDV+STF+TTG+V+ ALS  D
Sbjct: 918  FQVDWEAILSPNLDIFSQAVKPWLNAGTCIDTEWQSLPDVSSTFSTTGAVIGALSVQD 975


>gi|147795382|emb|CAN74233.1| hypothetical protein VITISV_040224 [Vitis vinifera]
          Length = 527

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 337/570 (59%), Positives = 400/570 (70%), Gaps = 79/570 (13%)

Query: 109 KGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNS 168
           +G A SALG+KE+AL VWE+GY HA+ QSADLKQFLELEELL   KQ+R +         
Sbjct: 18  QGHALSALGKKEDALLVWEQGYGHAVRQSADLKQFLELEELL---KQNRRI--------- 65

Query: 169 MSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEA 228
                              T ENH                     +   P+         
Sbjct: 66  -------------------TCENH---------------------AMESPE--------- 76

Query: 229 KGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEI----------NRQSS 278
              SS+ VS+S LH+N K     +N +  +D S+    S D SEI          + + +
Sbjct: 77  ---SSISVSESALHVNEKPNSTHKNDSKLNDESELCSESSDTSEIHCKPNSTHKNDSKLN 133

Query: 279 DDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKS 338
           D+ ++C+   D + +   H +  + T D HD+L  D+ + N+   +  + + +S+ +   
Sbjct: 134 DESELCSESSDTSEI---HCKAFD-TSDGHDELR-DTVNGNEKLNSESNGTMTSLLNQVM 188

Query: 339 SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYA 398
           S S   R K S K+D+  E  +EA RNKKFCVTRISK+KSISVDFRLSRGIAQVNEG Y+
Sbjct: 189 SLSYVVRRKSSNKYDIRSELGDEANRNKKFCVTRISKTKSISVDFRLSRGIAQVNEGNYS 248

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           +AISIFDQILKEDP YPEAL+GRGTA AFQREL +AI+DFT+AI+SNPSA EAWKRRGQA
Sbjct: 249 NAISIFDQILKEDPTYPEALVGRGTAYAFQRELSSAIADFTKAIESNPSACEAWKRRGQA 308

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
           RAALGES EAI+DL+KALEFEPNS DILHERGIVNFKFKDFNAAVEDLSACV+LDKENKS
Sbjct: 309 RAALGESSEAIEDLTKALEFEPNSTDILHERGIVNFKFKDFNAAVEDLSACVQLDKENKS 368

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
           AYTYLGLALSSIGEY +AEEAH+K+IQLD+NFLE W HLTQFYQDLAN  KALEC+++VL
Sbjct: 369 AYTYLGLALSSIGEYXRAEEAHMKSIQLDQNFLEGWAHLTQFYQDLANPTKALECIERVL 428

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            ID+ F+KAYHLRGLL HG+G+HKKAI DLS GLGI+ SNIECLYLRASC HAIGEY EA
Sbjct: 429 QIDEGFAKAYHLRGLLRHGMGEHKKAITDLSIGLGIENSNIECLYLRASCXHAIGEYGEA 488

Query: 639 IKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
           IKDYD AL LELDSMEKFVLQCLAFYQ  I
Sbjct: 489 IKDYDKALTLELDSMEKFVLQCLAFYQVNI 518


>gi|330789949|ref|XP_003283061.1| hypothetical protein DICPUDRAFT_146678 [Dictyostelium purpureum]
 gi|325087133|gb|EGC40514.1| hypothetical protein DICPUDRAFT_146678 [Dictyostelium purpureum]
          Length = 1045

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 308/979 (31%), Positives = 485/979 (49%), Gaps = 161/979 (16%)

Query: 52  WSKAIRILDSLL-AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
           +  ++++L+ LL     ++  +CNRA C  +LEL+KH I+DCD  L  +P          
Sbjct: 38  YVDSMKMLNVLLEINQNDLVALCNRATCNYRLELYKHCIKDCDMVLNNEPN--------- 88

Query: 111 CAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQD---RSVTCEYDVSN 167
               AL RK +AL      Y +A+          E+E+L   + +     S+  +     
Sbjct: 89  -NKVALLRKAKALKQISSTYPNAIE---------EIEKLKRQSNESWGYMSINLDDGDDP 138

Query: 168 SMSSLTVSESGLNANDKMSETSE--NHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRS 225
                 V ++ L AN    +TS   ++NKS    +S     + +T S          G+ 
Sbjct: 139 DDGLKDV-QTLLWANHTKKQTSPIISNNKSVFVSTSQNGSPMMQTDSPFY-------GQI 190

Query: 226 DEAKGGSSVPVSKSGLHING----KLREVSENHNGSSDGSKSTHASRDASEINRQSSDDF 281
           +EA   S + V +   ++NG         S N N  +D         +AS+I  Q   + 
Sbjct: 191 NEAVI-SPLMVDRGTPNVNGANIGNYNTCSPNFNIVNDS--------EASDIVEQLLYEN 241

Query: 282 DICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDS 341
           +  NG I+    N+R     NG  D  D +          N +++  +KS        DS
Sbjct: 242 EY-NGHINN---NKRKQADFNGYSDDDDCIQ---------NVHNQKITKS--------DS 280

Query: 342 TESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAI 401
            E  +KL      L++ S E                  ++   +S G   VN GKY  AI
Sbjct: 281 MEELNKL------LEQLSTE------------------NIATLISNGNFFVNSGKYKEAI 316

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           +IF  +++ +P+ P + +GRGT+ AF  +L+ AI DF++AI+ + ++ +A+KRRGQ++ A
Sbjct: 317 AIFTTVIENNPLIPSSYLGRGTSNAFLGDLDEAIYDFSKAIELDNTSSDAYKRRGQSKVA 376

Query: 462 LGESVEAIQDLSKALEFEPNS-ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            G   EA++D ++A+ F+  S  DI + RG+++++ +++  A++D    V ++ ++  A+
Sbjct: 377 RGMEYEALEDFNQAVAFDKESDYDIYYNRGLLHYQMRNYERALKDFKKVVSIEPQHTLAW 436

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
             +GL L+  G   +A  A L++I +D NF  ++ ++ Q ++DL   +K+LE   + L I
Sbjct: 437 NRIGLCLNVNGYPMEAYNAFLQSISIDPNFEASYTNIGQCWRDLGIFDKSLEAFNKALEI 496

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL---------------GIDPSNIECLYLR 625
              +  A HLRGLL +  G+H  AIKD S  L                IDPS  +    R
Sbjct: 497 CPNYCNALHLRGLLFYNSGRHLDAIKDWSIFLQEQLQKEKEPNGTIQPIDPSTNDVKQFR 556

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
           A  YH++G+ REA+ DY+       D + K  L    FYQKEIAL+T   ++     F I
Sbjct: 557 AVTYHSLGQIREALNDYN-------DILNKSPLH-YVFYQKEIALFTHHHLDQPLNTFSI 608

Query: 686 DGDIDPLFKEYWCKRL-HPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVAD 744
           D   +P  K + C+R+ H   V  +   QP + + +   K+   +  + K    LL  A 
Sbjct: 609 DRSFNPYLKTFQCQRIAHTSLVSYQ--PQPSINEIIPDVKIISDEDIINKD---LLDFAK 663

Query: 745 SIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRAR 804
            +G+K+QYDC GFLSN RQ    G+A IEIAQ + K+W            S SKN     
Sbjct: 664 EMGEKLQYDCEGFLSNSRQKLQCGMAVIEIAQTLKKLW-----------ISGSKN----- 707

Query: 805 RKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPC 864
                NIA Q  G    S+S   D        +R+       W+D+Y + VKWRQISEP 
Sbjct: 708 -----NIAFQVDGK---SSSFCQDVGG-----QRADKKHTFGWRDLYDIGVKWRQISEPN 754

Query: 865 DPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV--MKDKKYVHNK 921
           DPV WV+ LS E+FN GFGSHTP++ GQ KVVRY+P + ++ ++ K +  ++   YV   
Sbjct: 755 DPVWWVDLLSPEQFNEGFGSHTPIVTGQCKVVRYYPMFEKSFEIMKLLIPIQHSSYVDES 814

Query: 922 ADDIIDLSE--------DVVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIR 973
              ++DL           ++ +DF++ T C     EGK +EGTR+TL  +   GY+FAIR
Sbjct: 815 PTFLMDLDRASTCKDVYKIMNKDFYVVTPCYGLFSEGKVMEGTRLTLQYIHPEGYEFAIR 874

Query: 974 TPCTPSRWDEFDAEMTMAW 992
           TP TP+RW ++D EMT+ +
Sbjct: 875 TPGTPARWKQYDEEMTVVF 893


>gi|440796500|gb|ELR17609.1| tetratricopeptide repeat domain containing protein [Acanthamoeba
            castellanii str. Neff]
          Length = 898

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 229/675 (33%), Positives = 359/675 (53%), Gaps = 66/675 (9%)

Query: 376  SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
            S + ++D +++ G   VN G +  AI +F+ ++   P    A +GRGTA A    L  A+
Sbjct: 204  SGNTTLDEKIAMGYLHVNTGNFPQAIKLFNVLVNLYPKLVAAYLGRGTAYALSGHLSTAV 263

Query: 436  SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
             +F+ AI+ + +  EAWKRRGQ+RAA+G+  EA+ DL++A E  P  ADI H+RG++ FK
Sbjct: 264  EEFSAAIKIDDTCMEAWKRRGQSRAAMGQDAEAVLDLTRAAELAPKDADIYHQRGLIYFK 323

Query: 496  FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
             +++  A ED       D  +K ++ +LGL L+++G   +A +AH +A++LD  F EA  
Sbjct: 324  LRNYGRAAEDFRRATAADAMSKLSWNHLGLCLNALGRPMEAIQAHKRALELDPAFREALA 383

Query: 556  HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
            ++ Q Y+D  NS KA +   + L +D  +  A+HLRGL   G G H+ A+ D ++ L +D
Sbjct: 384  NIGQAYKDYGNSLKAEKYFAKGLKVDPNYMHAFHLRGLARFGAGDHRGALSDFTAALRVD 443

Query: 616  PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASK 675
              + +   +R    H +G +REA+ DYD  +  + D         +A+Y ++IAL+T   
Sbjct: 444  DKHKDSRLMRGIVLHGLGRFREAVADYDVLVREKPDH--------VAWYNRQIALWTHHH 495

Query: 676  INSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQ 735
            +++    F+ID  ++  FKE WCKRL P  +      QPP+ +++    L   D   ++ 
Sbjct: 496  LDTPVAHFNIDRVLNAYFKEAWCKRLDPATLTSYT-SQPPINNAIADVAL--NDELRSEH 552

Query: 736  KTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRS 795
               L+  A  IGKKIQ +CPG+L+N+RQ R  G A IE+AQ + ++W             
Sbjct: 553  AKLLIRAAVDIGKKIQLNCPGYLANQRQQRACGFAIIELAQTLRRVW------------- 599

Query: 796  SSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAV 855
                                   AG  T  S   SS  +T++  +     +W+D+Y + +
Sbjct: 600  -----------------------AGEETQLSGKASS--LTDQPHT----FAWRDLYDIPI 630

Query: 856  KWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKD 914
            +WRQ SEP DPV WV+ LS E+F  GFGSHTPM+ GQ  VVRY P   R + + +  ++ 
Sbjct: 631  RWRQFSEPNDPVWWVDLLSPEQFAEGFGSHTPMVTGQTYVVRYSPMAPRAIRIMREQLQQ 690

Query: 915  KKYV-----HNKADDIIDLS--EDVVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESG 967
               V     H    D +D     + V  DFW+ T C+S A   + +EGTR+T+ +    G
Sbjct: 691  SPLVSQELRHKLTRDNLDCKTLHEAVQHDFWVVTPCHSLARPNRIMEGTRLTIQRSPPEG 750

Query: 968  YDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKE 1027
            Y+F+IRTP TP+RW E++AEM   + +  E    S PH  L  +   +   L  +  W  
Sbjct: 751  YEFSIRTPGTPNRWQEYNAEMAHNYRLLQEEA--SKPHRDLSKLTELV---LHMAFYWYN 805

Query: 1028 YPDVTSTFATTGSVV 1042
            +  ++   A  G V 
Sbjct: 806  FMPLSRGTAAVGLVT 820



 Score = 40.8 bits (94), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 31/56 (55%)

Query: 78  CYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
            Y +L L++  + DC+ AL+L P   + Y+LKG A   + +  +A + W  G + A
Sbjct: 33  AYLRLGLYRKCLADCEAALRLQPADPRPYLLKGKALVGMNKSADAEAAWRAGLDKA 88


>gi|298714022|emb|CBJ27254.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1062

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 230/648 (35%), Positives = 334/648 (51%), Gaps = 70/648 (10%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD  ++ G  QVN G Y  A+ +F  +L   P    A +G G+A A    +E A++ F+ 
Sbjct: 314 VDNLIALGYLQVNTGNYRKAVELFRGLLSIRPGLVGAHLGLGSALALLGGMEHAVASFSA 373

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFKFKDF 499
           AI+++P   + WKRRGQ RAALG +V A+ DL +A+E F     D+LH+RG+V  K + F
Sbjct: 374 AIEADPLEPDCWKRRGQTRAALGHAVGALSDLDRAVELFNGRDPDVLHQRGMVYHKLRYF 433

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           + AV D S  VK   ++K+ +  + L    +GE + AEEA+ +A+ +D +F EAW +L  
Sbjct: 434 SRAVSDFSEVVKSSVDSKTDWNMMALCRGQLGEPEAAEEAYRQALAIDPSFKEAWTNLGS 493

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             +D    EKAL      L +D  +  AYHLRGL  HG+G HK A  D   GL  D  + 
Sbjct: 494 LLRDWGKGEKALGAFDNALSLDTAYVHAYHLRGLCKHGMGDHKGAQADFMRGLFYDGQDE 553

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSE 679
            C Y+ A C HA G+  EA + YDA L L+            A+Y +E  +Y  S I   
Sbjct: 554 HCRYMAALCMHARGQLEEAARCYDALLSLKPGHQ--------AWYTRECCVYLWSNIRRP 605

Query: 680 FCWFDIDGDIDPLFKEYWCKRLHPKNV-----------------CEKVYRQPPLR----- 717
           +  F  D ++DP FKE WCKR  P  +                   +V   PP +     
Sbjct: 606 WREFSPDAELDPEFKEAWCKRHDPMTLRHYTRHRKPTGAQARVTLAEVRTTPPAKPLSSP 665

Query: 718 -DSLKKGKLRRQDFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQ 776
            D     K    +F+      ++L  A  IG  IQ  CPGFLSN RQHRM GLA++E+AQ
Sbjct: 666 DDKTDTIKTAAANFAKPDVVESVLRAAAPIGPGIQLRCPGFLSNSRQHRMFGLASLELAQ 725

Query: 777 KVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITE 836
            V + W S++A            G  A   D           AG S S +    + G   
Sbjct: 726 LVRRHWDSVKA-----------GGTGAIVPD-----------AGSSRSVAGKLPAGGGGV 763

Query: 837 ERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKLSE-EFNSGFGSHTPMILGQAKVV 895
                   + ++D++ +AV+WRQ+SEP DPV W+++L+   F  GFG  TPM+ GQ KVV
Sbjct: 764 GGHP----VGYRDLFDVAVRWRQLSEPNDPVWWIDRLTTGAFKEGFGLQTPMVNGQLKVV 819

Query: 896 RYFPNYARTLDVAKTVMKDKKYVHNKADDII-----DLSE--DVVGEDFWLATWCNSTAF 948
           RY+P Y   LD+ K++M ++  +  +    I      L+E  + +G D W+ T C  ++ 
Sbjct: 820 RYYPYYPMALDLMKSLMCEQSSLSEETKAAISHPDAGLAELYEAIGHDHWVVTPCQRSSL 879

Query: 949 ----EGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAW 992
               EG+ +EGTR+T+V     G++F IRTP TP RW +++ E+   W
Sbjct: 880 GPGSEGRIMEGTRLTIVANNPEGFEFTIRTPGTPERWRQYEDELCAVW 927



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
           CNRA     LE+ +  IRD D A+++D   L+AY+LK  AF  LG+ ++A    E G E 
Sbjct: 42  CNRATAKLGLEMFRACIRDLDDAIRIDQYALRAYLLKDQAFRGLGKPDQAREALEAGIE- 100

Query: 133 ALHQSADLKQFLELEELL 150
           A  +  D+  +++L E L
Sbjct: 101 AGKEGGDVVLYVQLVESL 118


>gi|384250834|gb|EIE24313.1| protein prenylyltransferase [Coccomyxa subellipsoidea C-169]
          Length = 859

 Score =  364 bits (934), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 227/650 (34%), Positives = 348/650 (53%), Gaps = 83/650 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILK--EDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           +S  ++ VNEG  A+AI I D I+          A + RGTARA  R+L+ AI DF+  I
Sbjct: 125 VSIAVSHVNEGNLAAAIDILDHIIATTSGAHLSGAHVARGTARAMMRDLKGAIDDFSVTI 184

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF---EP-NSADILHERGIVNFKFKD 498
           ++ P+ G+AW RRGQARAALGE  +A+ DL++ L+    EP   A+   ERG +  K +D
Sbjct: 185 EAVPAYGDAWMRRGQARAALGEDEDALVDLARCLQLSATEPARQAEARLERGKILHKLRD 244

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           + +AV +L   V ++ +++ A+ +LGL   S+G+ +     + + ++++ N LEAW HL 
Sbjct: 245 YRSAVAELQQAVDINPKSQQAWNFLGLCQVSMGDIRPGAACYERVLRVNPNSLEAWMHLA 304

Query: 559 QFYQDLANSEKALECLQQVLYIDK---RFSKAYHLRGLLLHGLGQHKKAIKDLSSGL--G 613
           Q  ++ A+ E A     +   +D+   R S    +   +  GLG+H+KA K L   L   
Sbjct: 305 QARKEEASVEAAEAAFARAAELDRDGGRASARLRMHAHMCQGLGRHRKAAKLLKEALEAS 364

Query: 614 IDP-SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM--EKFVLQCLAFYQKEIAL 670
            +P + +ECL+LR +C+HAIGE+ EA+ +Y+ A  +E   +  +    Q L+FYQ+E+AL
Sbjct: 365 SNPDAVVECLHLRGACHHAIGEFIEAVANYERAFSMEAPDLGDDARSRQFLSFYQREMAL 424

Query: 671 YTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDF 730
           YT ++++     + +D D+ P+FKE WCK++ P      VYR   L+     G  R    
Sbjct: 425 YTLNRLDENVAEYCVDRDLHPIFKELWCKKMPPTAQLLSVYR---LQPLPPGGPPRAPPG 481

Query: 731 SVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWK 790
                  +L+  AD++GK +QY   GFL+N RQ RMAGLA IE+AQ +    R L AE +
Sbjct: 482 PAPGDVESLIRRADALGKLLQYCHQGFLANARQQRMAGLAVIELAQAL----RHLTAE-R 536

Query: 791 YSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDV 850
            + R                      G +GC+ S                 HP   W+D 
Sbjct: 537 VAGREVQGPA----------------GASGCAVS-----------------HP-FGWRDA 562

Query: 851 YTLAVKWRQISEP-------CDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYA 902
             + VKWRQ+SEP       C  V+WV+ L+ EEF +GFGSHTP+  GQ K VRY+ N+ 
Sbjct: 563 MDIIVKWRQLSEPNDQARPLCILVIWVDLLTREEFEAGFGSHTPIFSGQTKCVRYYMNFD 622

Query: 903 RTLDVAKTVMKDKKYVHNKADDIIDLSED-----------------VVGEDFWLATWCNS 945
           R   + K+++  +    +  ++ I L+ +                  +G D W+    +S
Sbjct: 623 RGFALLKSILAQEGRAFDAQNEAIPLAGEHKQAEIADARTAGDMWRAIGADSWVVVHIDS 682

Query: 946 TAFEGKQLEGTRITLVKM--GESGYDFAIRTPCTPSRWDEFDAEMTMAWE 993
            A  G  +EGTR+TLVK+      Y+F+I+TP TP+RWDE+D E+   WE
Sbjct: 683 AARPGHAMEGTRLTLVKLRNQPDAYEFSIKTPVTPARWDEYDTELNALWE 732


>gi|260804501|ref|XP_002597126.1| hypothetical protein BRAFLDRAFT_76343 [Branchiostoma floridae]
 gi|229282389|gb|EEN53138.1| hypothetical protein BRAFLDRAFT_76343 [Branchiostoma floridae]
          Length = 989

 Score =  360 bits (925), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 284/980 (28%), Positives = 452/980 (46%), Gaps = 153/980 (15%)

Query: 52   WSKAIRILDSLL---AQSYEIQDI----CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
            ++ AI++L  +L    +S E ++I    CN A CY +L L + V+  CD A++ D   LQ
Sbjct: 22   YNDAIKLLSQVLKDKGRSLEPREIAAVHCNLASCYLKLGLLRKVVSSCDAAIKADAASLQ 81

Query: 105  AYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYD 164
            AY+ KG   S L    E +SV     E              + +L   +    +++    
Sbjct: 82   AYLYKGETVSVLSPAGETVSVLSPAGE-------------TVRQLSVLSPTGETISVLSP 128

Query: 165  VSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGR 224
               ++S L+ +   ++      +      K D      Q+R V E+            GR
Sbjct: 129  TGETVSVLSPAGETISVLSPTGKALHRLKKPD------QARQVWESAL----------GR 172

Query: 225  SDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
              + +  S          I G ++ + E+ +G +     T  + D +   R ++   ++ 
Sbjct: 173  YGDFQVLS---------EILGCIQCLEEDTSGPT--PTQTKVNGDPAHYGRSTTPP-NLQ 220

Query: 285  NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
             G  D+        + T GT D            ND    S+  +K+++   ++ DS ++
Sbjct: 221  QGTADRGDSE----KTTEGTADSQG---------NDKTAESQDSNKTTVGTAENQDSNKT 267

Query: 345  RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
                +       E  + +K    F   R       S +F++ RG   VNEG Y  AI +F
Sbjct: 268  AVGTA-------EGQDSSKTTGGFLDPR-------SPEFKVGRGFLLVNEGNYDEAIKLF 313

Query: 405  DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
            + IL+  PM  +A +GRGTA A  R+L  A +DFT+A+   P   E WKRRGQ RAALG+
Sbjct: 314  NTILQLHPMTYKAYVGRGTAYAMTRQLLKAEADFTQALTLEPKETEIWKRRGQVRAALGQ 373

Query: 465  SVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAVEDLSACVK----------LD 513
              +AI+DL++A    +    DI  E G++     D  +A+   +   K          LD
Sbjct: 374  EGQAIEDLNRAQSICKVVDVDIQKEVGLIYQAKGDNVSALMHFTRADKVLLVKQKQGELD 433

Query: 514  K-ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
            K + K+ +  +GL  +S+G    A   + +A+ LD +F E+  ++ Q Y+D  N +KA E
Sbjct: 434  KSQAKTLWNAMGLCQNSLGYCMDAVVTYQRALNLDPDFRESIVNMAQAYKDYGNFQKADE 493

Query: 573  CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
               + L +D R     +L GL L+G G+ +++       L + P N +CLY+      A+
Sbjct: 494  LFARALRLDPRCVTTLNLHGLCLYGAGEIRRSYDTHCKLLEVAPHNEDCLYMHGISAQAL 553

Query: 633  GEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPL 692
            G +R+A++ +       L+SM        AFY +E+ L+    ++     ++ D ++   
Sbjct: 554  GLFRKAVESFT-----HLNSMNP---AHWAFYTRELCLFQHHHLDMPLKDYNADIELHEC 605

Query: 693  FKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIGKKIQY 752
            FKE W KRL P ++     +Q      +       QD +++     +  VA  +G ++QY
Sbjct: 606  FKEAWTKRLDPTHLTFDYCKQADFSHDIADVD---QDAALSNAARDIAKVAFPLGDRLQY 662

Query: 753  DCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIA 812
            D PGFL N++QHR  GLA +++AQ               ++ S S             I 
Sbjct: 663  DTPGFLVNKKQHRWFGLAMVDMAQ---------------TDTSGS-------------IM 694

Query: 813  SQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNK 872
               R  +GC TS                      W+D++ +AVKWRQ SEP DPV WV+ 
Sbjct: 695  VTGRASSGCRTSHV------------------FGWRDLFDIAVKWRQASEPNDPVWWVDL 736

Query: 873  LSEE-FNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------NKADD 924
            L++E F  GFGS TPMILGQ  VVRY+P + +   + K +MKD+           N+A  
Sbjct: 737  LNQETFTEGFGSQTPMILGQCHVVRYYPYWKKAFPLMKDLMKDQCNPSPAQLEQINEAQT 796

Query: 925  IIDLSEDVVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEF 984
              DL   +   DF++AT C+S A  G+ +EGTR+T+ K    GY  +IRTP TP+RW +F
Sbjct: 797  PHDLYA-IRSHDFYVATPCHSQAAPGRIMEGTRLTIQKKTRYGYTCSIRTPGTPARWKQF 855

Query: 985  DAEMTMAWEVDWEAILNSDP 1004
            D EM  AWE   E  +   P
Sbjct: 856  DQEMAHAWERLCEEAVRPQP 875


>gi|428182577|gb|EKX51437.1| hypothetical protein GUITHDRAFT_66029 [Guillardia theta CCMP2712]
          Length = 682

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 207/597 (34%), Positives = 318/597 (53%), Gaps = 64/597 (10%)

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN----- 481
            Q  L AA  DF+ A+ ++P+  +AWKRRGQ RAALG   EAI+DL+KA    P+     
Sbjct: 1   MQGNLAAAAKDFSRAVDADPNVADAWKRRGQTRAALGFDQEAIKDLTKAASLSPDHEYAY 60

Query: 482 -SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            + D   +RGIV  K  DF  A+ D    + +D  +   + ++GL  +S+G  ++A  A+
Sbjct: 61  LTCDFFFQRGIVYHKMMDFRKALTDFRKALNIDGSSPITWNFVGLCENSLGRTREAIIAY 120

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +A QLD N  EAW +L Q Y+D  + + A +       +D  +   YHLRGLL +G G+
Sbjct: 121 ERATQLDPNMKEAWANLGQAYRDAGDRQNAEKYFAMAEKLDPNYVHCYHLRGLLFYGCGE 180

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
            + A+ D S G   D ++  C  ++A C H++G+   AI +Y   L L++D + K ++  
Sbjct: 181 IRLALHDFSRGHECDRNDKNCFLMKAVCKHSLGDMSGAISEY--TLLLKMDPVRKELMVA 238

Query: 661 ---LAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR---LHPKNVCEKVYRQP 714
              L +YQ+E+A+Y    ++     F+ D ++D  FKE +CKR    HP+ +C  + ++P
Sbjct: 239 AGHLCYYQRELAIYLQKHLDVNLISFNADVELDAYFKESYCKRDPTNHPR-LCNYIPQKP 297

Query: 715 PLRDSLKKGKLRRQDFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEI 774
               + K   ++  D +  K+   L+ ++   G  IQ    GFLSN RQHRM GLA + +
Sbjct: 298 A---TSKIPDVKMVDKTGVKEVDELVELSRRFGPLIQLRSAGFLSNLRQHRMCGLAILHM 354

Query: 775 AQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGI 834
           AQ+    W+S       S   +  NG R     R ++    +G    S+       ++G 
Sbjct: 355 AQQAKAWWQS------GSTAETVANGSR-----RYDLYFDVKG----SSKDCGKKHAFG- 398

Query: 835 TEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKLSEE-FNSGFGSHTPMILGQAK 893
                       W+D   ++VKWRQISEP DPV W++ ++ E F  GFG  TPM+ GQ  
Sbjct: 399 ------------WRDFMDISVKWRQISEPNDPVFWIDLMAPEVFAEGFGLQTPMVTGQMN 446

Query: 894 VVRYFPNYARTLDVAKTVMK--------DKKYV--HNKADDI------IDLSEDVVGEDF 937
           VVRY+P + R  DV K +++        D++++   NK D +       DL E V+ + F
Sbjct: 447 VVRYYPYFERARDVVKKLIEESGACNVHDQRFMLPPNKIDQLREAKTCQDLWE-VMQQGF 505

Query: 938 WLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWEV 994
           ++ T C+S A  G+ + GTRITL++    G+DF IRTP TP RW E D EM  AW +
Sbjct: 506 YVETPCHSVARPGEIMAGTRITLLQKPPDGFDFTIRTPGTPPRWVEMDKEMAHAWSL 562



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 31/54 (57%)

Query: 993  EVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVVAALS 1046
            +VDW AIL+  P  F+D VKSW+YPS K     +  P V    AT   ++ AL+
Sbjct: 627  QVDWPAILSPTPAGFIDEVKSWIYPSRKRCDILETAPAVGEVLATPRRMLEALN 680


>gi|307111954|gb|EFN60188.1| hypothetical protein CHLNCDRAFT_133703 [Chlorella variabilis]
          Length = 1021

 Score =  335 bits (860), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 230/710 (32%), Positives = 334/710 (47%), Gaps = 117/710 (16%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            L+  +  VN+G    A S+ D +L   P    A   RGTARA   EL  A+ DF+ AIQ 
Sbjct: 266  LALAVQLVNDGSCREAASLLDLLLYHHPGNVGAFAARGTARALLGELSGAVEDFSAAIQL 325

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS---ADILHERGIVNFKFKDFNA 501
             PS  + +KRR QA AALGE   A  D+  A+   P++   A+   + G ++ K KD+  
Sbjct: 326  EPSFADFYKRRSQALAALGEDERAAADVQSAISLSPDAAAKAECHEDLGRLHQKAKDYRR 385

Query: 502  AVEDLSACVKLDKENK--SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
            A ++      L          T LGL    I  Y+        A++LD    + W +L  
Sbjct: 386  AEQEFRVAASLAPAGPRLELLTALGLCQEGIATYE-------AALKLDATSKDLWLNLGM 438

Query: 560  FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL---HGLGQHKKAIKDLSSGLGI-- 614
              ++L   E+A + L++   +  +   A H   LL     GLG H  A+++L+ G+    
Sbjct: 439  ACKELCWVERAEQALRKAARLAGKGGTAVHAYRLLAQMKQGLGDHLGAVRELNRGIAATD 498

Query: 615  -DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE--LD-----SMEKFVLQCLAFYQK 666
                 IE  +LR +C+HA+G +R+A++DY   L+ +  LD     S E     CLAFYQK
Sbjct: 499  KQSQRIELQFLRGACHHAVGLHRQAVEDYQQTLEAQDSLDPGSTTSGELVSFICLAFYQK 558

Query: 667  EIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLR 726
            E+ALY    ++S    F +D D+ P FKE WCK+  P      +YR   ++         
Sbjct: 559  EMALYVRKNLDSHVLSFCVDADLHPEFKELWCKKGPPSGTFVSMYRA-IMQPQHPNWSAP 617

Query: 727  RQDFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQ 786
            +      +Q   LL  AD++GK +QY   GFL N+RQ RMAGLAAIE AQ + ++     
Sbjct: 618  KPPPPPAEQLGLLLEAADAVGKLVQYSHQGFLPNKRQQRMAGLAAIEFAQALQQL----- 672

Query: 787  AEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMS 846
                          KR  R   ++        AG S S+   +          SG  +M 
Sbjct: 673  -----------AADKREGRPTLVD-------NAGASVSARRHS---------RSGRHEMG 705

Query: 847  WQDVYTLAVKWRQISEPCDPVVWVNKLSE-EFNSGFGSHTPMILGQAKVVRYFPNYARTL 905
            W+D   + V+WRQ++EP D V+WV+ L+E EFN+GFGSHTPM  GQ K VRY+  + R +
Sbjct: 706  WRDAMDVIVRWRQLAEPNDQVIWVDLLTEREFNAGFGSHTPMFTGQTKCVRYYMIFHRAM 765

Query: 906  DVAKTVMKDKKYVHNKADDIIDLSE-----------------DVVGEDFWLATWCNSTAF 948
             V K V+  ++   N ++  ++L                     +G D W+     ST  
Sbjct: 766  AVMKRVLAAERKATNASNAAVELDTEERQAAAQAAETAEAMWKALGSDCWVVVPIESTTR 825

Query: 949  EGKQLEGTRITLVKM------------------------------GES----------GY 968
             G  LEGTR+T+V M                              GE+           Y
Sbjct: 826  PGHTLEGTRLTVVSMCKQAAAPEEQAQPVAFRLGNGVRGAEVAQGGEAAPPKPRPQPDAY 885

Query: 969  DFAIRTPCTPSRWDEF-DAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYP 1017
            +F+IRTP TP+RWD++  A     ++ DWEAIL S P  F+ SV  W+YP
Sbjct: 886  EFSIRTPVTPARWDDYHQARPPPHYQTDWEAILESRPASFIASVAPWMYP 935



 Score = 40.0 bits (92), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 8/98 (8%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEI---QDICNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
           L + + W+  IR LD+ L ++ +    + + NR FC  QL L++  ++D +  L   P  
Sbjct: 8   LLASKQWTGLIRSLDAALQEAVDCDRQRLLLNRGFCLQQLGLYRKALKDYEAVLAGQPGQ 67

Query: 103 LQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADL 140
             A + K     AL + EEA    E+     L ++ADL
Sbjct: 68  AAALLSKAKVHVALKQLEEAQECLEE-----LGKAADL 100


>gi|159462574|ref|XP_001689517.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii]
 gi|158283505|gb|EDP09255.1| predicted chloroplast-targeted protein [Chlamydomonas reinhardtii]
          Length = 929

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 226/708 (31%), Positives = 336/708 (47%), Gaps = 83/708 (11%)

Query: 389  IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
            + Q+N G    A +I D++L + P    A + RGTARA +R+L  A+ DF  AI+  P  
Sbjct: 175  VTQINSGSIVEAEAILDKVLVKTPRELGARVARGTARALRRDLAGAVEDFGVAIEVEPRY 234

Query: 449  GEAWKRRGQARAALGESVEAIQDLSKALEFEP---------NSADILHERGIVNFKFKDF 499
             ++WKRRGQAR+ALG+   A+ DL KA++  P         + A+   E+G++  K +D+
Sbjct: 235  ADSWKRRGQARSALGDHEGALADLQKAIDLAPLFGGPDSAQSRAECYVEKGMIYQKMRDY 294

Query: 500  NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
              A  +L   VKLD  N  A+  LGL  +S G+ +    A+ KA++L+    E W ++ Q
Sbjct: 295  RRACRELQQAVKLDGSNAQAWNVLGLCSTSQGDIRDGVRAYEKAVELNPKLKEGWVNMGQ 354

Query: 560  FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH---GLGQHKKAIKDLSSGLGI-- 614
              ++   +++A   L + L +D     A H+  +L       G+H  AIK L   L +  
Sbjct: 355  ALKEEGRTKEAERVLLKALALDPPDQPAVHVLRVLAQMKQQKGEHAAAIKLLDRALPVAE 414

Query: 615  --DPSNIECLYLRASCYHAIGEYREAIKDYDAALD------LELDSMEKFVLQCLAFYQK 666
              D   IE LYLRA CYHA+G  REA++DYD  L       +   S E    Q L+FYQK
Sbjct: 415  ARDEQVIEVLYLRAICYHALGAAREAVRDYDDCLGHVPKTGIANVSEEARQFQFLSFYQK 474

Query: 667  EIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLR 726
            +IALY    +      F  D ++  +FKE WCK+  P       +   P           
Sbjct: 475  DIALYFYHSLERRAKDFCPDSELPAVFKELWCKKGPPTAELISHFPPQPPLPLTPAPLPP 534

Query: 727  RQDFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQ 786
                 + + +  L   AD +G  +Q    GFL N RQ R AG AA+E+AQ + ++  + +
Sbjct: 535  VSPAEMERLRP-LTAAADQLGVLLQNHHQGFLPNVRQQRAAGYAAVELAQALREVVAARR 593

Query: 787  AEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMS 846
            A  +   RS   +G+                 AG                  S+G     
Sbjct: 594  AGRQVWVRSEGSSGQ-----------------AG------------------SAGRHLFG 618

Query: 847  WQDVYTLAVKWRQISEPCDPVVWVNKLSE-EFNSGFGSHTPMILGQAKVVRYFPNYARTL 905
            W+D   + VKWRQ+SEP D VVWV+ L+  EF  GFGSHTPM  GQ K VRY+ N+AR L
Sbjct: 619  WRDAMDIVVKWRQLSEPNDQVVWVDLLTRREFEQGFGSHTPMFSGQTKCVRYYMNFARAL 678

Query: 906  DVAKTVMKDKKYVHNKADDIIDLSED-----------------VVGEDFWLATWCNSTAF 948
            ++ K V+  + +  +  ++ I +  +                 V+ +D W+    +S A 
Sbjct: 679  ELQKEVLLREGHAFDANNNTIPVGSEAKRAAIRAARTAEDMYQVLQQDSWVVVPIHSVAR 738

Query: 949  EGKQLEGTRITLVKMGES--GYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHF 1006
                +EGTR+TLV++      Y+F+IRTP TP RW +FDAE+  A+E    A    D   
Sbjct: 739  ADHMMEGTRLTLVRVPNQPDAYEFSIRTPVTPPRWKDFDAELEAAFEGILAAFAEDDLPL 798

Query: 1007 FLDSVKSWLY-----PSLKTSTSWKEYPDVTSTFATTGSVVAALSSYD 1049
                + ++ Y       L   T+   Y  +   F   G  V A    D
Sbjct: 799  LASRIMTYCYYWYNFMPLARGTAAVGYTTMLGLFWGAGMPVTATIPKD 846


>gi|66823735|ref|XP_645222.1| tetratricopeptide-like helical domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60473299|gb|EAL71245.1| tetratricopeptide-like helical domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 1050

 Score =  325 bits (834), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 204/656 (31%), Positives = 335/656 (51%), Gaps = 95/656 (14%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +S+G   VN G+Y  AI +F  I+  +P+ P   +GRGT+ AF  +L  AI+DF+ AI+ 
Sbjct: 291 ISQGNTFVNAGQYEEAIELFTMIIDNNPLVPSLYLGRGTSNAFLGQLNEAINDFSRAIEL 350

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-NSADILHERGIVNFKFKDFNAAV 503
           + ++ +A+KRRGQ++ A     EA++D ++A+ F+  +  DI + RG+++++ +++  A+
Sbjct: 351 DNTSSDAYKRRGQSKVAKSMEQEALEDFNQAVAFDKEDDYDIYYNRGLLHYQMRNYERAL 410

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           +D      ++  +K A+  +GL L+  G   +A +A  +A+++D  F  +  ++ Q ++D
Sbjct: 411 KDFKKVTSIEPSHKLAWNRIGLCLNVNGYPMEAYQAFTEALRIDPYFEASHTNIGQCWKD 470

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID-------- 615
           L   + + +   + L I   +S A HLRGLL    G+H  AIKD +  L +         
Sbjct: 471 LGKFDPSYQSFTKALEICPNYSNALHLRGLLFFNSGRHLDAIKDWNLFLKLYGSGGANSS 530

Query: 616 -----------------------PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
                                   S I+    R     +IG +R+A+ DYD    L+ + 
Sbjct: 531 GSNIKTGNHYSGGGGGGGGGEELSSIIDVRQFRGIVNQSIGAFRKAVADYDQI--LQTNP 588

Query: 653 MEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNV-CEKVY 711
           +         FYQ+EIAL+T   +N+    F+ID  I+   K + C+R+   ++ C  + 
Sbjct: 589 LHN------CFYQREIALWTHHHLNTPLSTFNIDRFINCYLKTFQCQRIPNTSLTCNSIS 642

Query: 712 RQPPLRDSLKKGKLRRQDFSVTKQ----KTALLLVADSIGKKIQYDCPGFLSNRRQHRMA 767
               L+ S  +      D  +  Q    + +L   A  IG+ +QY+C GFL+N RQ    
Sbjct: 643 LGFQLQSSFNQS---VADVEICHQLNNEQLSLFKEAKRIGEMLQYNCDGFLTNSRQKLQC 699

Query: 768 GLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSS 827
           GL+ IE+AQ + K+W S        N+ SS       + D          G   S S+  
Sbjct: 700 GLSVIEMAQTLKKLWLS-------GNKKSS-----VFQLD----------GKSSSVSTKK 737

Query: 828 DTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTP 886
            T                SW+D+Y + VKWRQISEP DPV W + LS E+F  GFGSHTP
Sbjct: 738 HT---------------FSWRDLYDIGVKWRQISEPNDPVWWGDLLSPEQFKEGFGSHTP 782

Query: 887 MILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDLSED---------VVGEDF 937
           +I GQ KVVRY+P + ++ ++ K ++  +         I+D  E          ++ +DF
Sbjct: 783 IITGQCKVVRYYPMFEKSFEIMKLLLPIQHPSLISNQTILDQLESATTCKDLYKLIKKDF 842

Query: 938 WLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWE 993
           ++ T C S + E K +EGTR+TL  +   GY+FAIRTP TP RW+++  E+ + W+
Sbjct: 843 FVVTPCYSRSNENKVMEGTRLTLQYIHPEGYEFAIRTPSTPYRWEQYSQELDIIWD 898



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)

Query: 52  WSKAIRILDSLL-AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
           + + + IL+ L+   + +I  +CNRA C  +LEL+KH I+DC+  L  +P    A + K 
Sbjct: 31  YVECMNILNKLIELNTNDIIALCNRATCNYKLELYKHCIKDCEVILCKEPNNKIALLRKA 90

Query: 111 CAFSAL 116
            A   L
Sbjct: 91  KALKQL 96


>gi|302840983|ref|XP_002952037.1| hypothetical protein VOLCADRAFT_121038 [Volvox carteri f.
            nagariensis]
 gi|300262623|gb|EFJ46828.1| hypothetical protein VOLCADRAFT_121038 [Volvox carteri f.
            nagariensis]
          Length = 1509

 Score =  322 bits (824), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 225/713 (31%), Positives = 341/713 (47%), Gaps = 102/713 (14%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA-AISDFTEAIQ 443
            +   + Q+N G    A +I D+++   P                REL A A+ DF  AI+
Sbjct: 774  IQMAVTQINSGNIVEAEAILDKVIAATP----------------RELGARAVEDFNVAIE 817

Query: 444  SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP---------NSADILHERGIVNF 494
              P   ++WKRRGQAR+ALG+   A+ DL KA++  P         + A+   E+G++  
Sbjct: 818  VEPRYADSWKRRGQARSALGDHEGALTDLQKAIDLAPLFGGADSASSRAECWMEKGMIYQ 877

Query: 495  KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            K +D+  A  +L   VKLD  N  A+  LGL  +S G+ +    A+ KA++L+    EAW
Sbjct: 878  KMRDYRRACRELQQAVKLDPTNSQAWNVLGLCSTSQGDIRDGVRAYEKAVELNPRLKEAW 937

Query: 555  GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL---HGLGQHKKAIKDLSSG 611
             ++ Q  ++   +++A   L + L +D     + H+  +L       G+H  AIK L   
Sbjct: 938  VNMGQALKEEGRTKEAERVLLKALTLDAPDQPSVHVLRVLAQMKQQKGEHAAAIKLLDRA 997

Query: 612  LGI----DPSNIECLYLRASCYHAIGEYREAIKDYDAALDL------ELDSMEKFVLQCL 661
            + +    D   IE LYLRA C+HA+G  REA++DY+  L+          S E    Q L
Sbjct: 998  IPVAEAKDEQVIELLYLRAICHHALGAIREAVRDYEECLNYVPRNTHVTPSEEARQFQFL 1057

Query: 662  AFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLK 721
            +FYQK++ALYT   ++ +   F  D ++  +FKE WCK+  P +     Y Q P      
Sbjct: 1058 SFYQKDLALYTYHSLDRKAVDFCPDSELPAVFKELWCKKGPPTSELIAHYPQYPPLPLSP 1117

Query: 722  KGKLRRQDFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKI 781
                   D    +Q T L   AD +G  +Q +  GFL N RQ R AG AAIE+ Q + ++
Sbjct: 1118 PPLPSPPDAERVRQLTVL---ADKLGVLLQNNHQGFLFNVRQQRAAGYAAIELGQAMLEV 1174

Query: 782  WRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSG 841
              + +A  ++  RS   +G+                 AG                  S+G
Sbjct: 1175 VAARRAGRQHWVRSEGSSGQ-----------------AG------------------SAG 1199

Query: 842  HPKMSWQDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPN 900
                 W+D   + VKWRQ+ EP D VVWV+ L+  EF  GFGSHTPM  GQ K VRY+ N
Sbjct: 1200 RHLFGWRDAMDIVVKWRQLCEPNDQVVWVDLLTRREFEQGFGSHTPMFSGQTKCVRYYMN 1259

Query: 901  YARTLDVAKTVMKDKKYVHNKADDIIDL--------------SED---VVGEDFWLATWC 943
            +AR LD+ + V+  + +  +  +  I L              +ED   V+ +D W+    
Sbjct: 1260 FARALDLQREVLLREGHAFDANNRTIPLGSESQREAIRVARTAEDMYQVIQQDSWVVVPI 1319

Query: 944  NSTAFEGKQLEGTRITLVKMGES--GYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILN 1001
            +S A +   LEGTR+TLV++      Y+F+IRTP TP RW +FDAE+  A++   +A+ +
Sbjct: 1320 HSVARQEHMLEGTRLTLVRVPNQPDAYEFSIRTPVTPPRWKDFDAELEAAFDAVLQALAD 1379

Query: 1002 SDPHFFLDSVKSWLY-----PSLKTSTSWKEYPDVTSTFATTGSVVAALSSYD 1049
             D       + ++ Y       L   T+   Y  + S F   G  V A    D
Sbjct: 1380 EDLPKLAQRILTYCYYWYNFMPLARGTAAVGYTTMLSMFWAAGMPVTAAIPKD 1432


>gi|167378211|ref|XP_001734716.1| tetratricopeptide repeat protein [Entamoeba dispar SAW760]
 gi|165903665|gb|EDR29120.1| tetratricopeptide repeat protein, putative [Entamoeba dispar
           SAW760]
          Length = 912

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 203/641 (31%), Positives = 330/641 (51%), Gaps = 86/641 (13%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  L+ G   VN  +   A+  F   LK+ P    A +GRGTA A     E AI DFT 
Sbjct: 202 IDKELAMGYLYVNNNRVKEAVDYFTVFLKKYPNVVGAFLGRGTALAMLSNFEKAIQDFTS 261

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
           AI+ +P  G+A+KRRGQ   A G+  E ++D +KA+E       D   +RG V    K++
Sbjct: 262 AIKCDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 321

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
                D    V+ +  + +++ +LGL  +++G   +A +A+ +A+Q+  +F+E + +L Q
Sbjct: 322 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 381

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS---------- 609
            ++D  N +++ +   ++  +    S  +++ G+L    G H  AIK+ +          
Sbjct: 382 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFTLAIDNRTEPI 441

Query: 610 SGLGIDPSNI-ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
           SG+  DP  + E    R     A G++R A++D++ A++L+ D          A+Y KEI
Sbjct: 442 SGIEKDPERMCEAWRYRGVTRSASGQFRLAVEDFERAMELKSDDT--------AWYMKEI 493

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQ 728
           ALYT   +N  F  +D++    P FKE +CK L P  +  +   QPP  +S+    +  +
Sbjct: 494 ALYTHHHLNKSFEEWDLES-FYPFFKEGFCKHLIPAAL-HRYEEQPPFEESI--SDVDEK 549

Query: 729 DFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAE 788
                     +++ A +IGK +QYD  GF+ N+ Q+ MAG+AAIE+A+K+    R +  E
Sbjct: 550 SLPSQNVINRIIIPAMNIGKYMQYDSQGFVHNKAQYLMAGMAAIEMAKKI----RDVLPE 605

Query: 789 WKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGH-PKMSW 847
           W +                                         G+TEE++  +  K+ W
Sbjct: 606 WVFG----------------------------------------GLTEEQAKPYIGKLHW 625

Query: 848 QDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLD 906
           +DV  +AVKWRQISEP DPV W++ L+ E+F  GFGSHTPM +GQ +VVRY+  Y R  +
Sbjct: 626 RDVMKIAVKWRQISEPNDPVYWIDLLTHEQFEEGFGSHTPMFIGQTRVVRYYCQYQRAFE 685

Query: 907 VAKTVMKDKKYVH-------NKADDIIDLSEDVVGEDFWLATWCNSTAFEG-------KQ 952
           + K ++ ++  +          A +I D+  DV+  DF + T C S  F+        + 
Sbjct: 686 IVKKLLPEQLKIKEDWAEKVKAAKNIQDIL-DVMKSDFHVTTPCKSLYFDDPDKPGTKRT 744

Query: 953 LEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWE 993
            EGTR+ +V++ + GY+FAI+TPCT  RW  +D E+T  W+
Sbjct: 745 YEGTRL-VVEIKQPGYEFAIKTPCTMPRWKLYDEELTECWK 784


>gi|67474444|ref|XP_652971.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
 gi|56469881|gb|EAL47585.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
          Length = 917

 Score =  316 bits (810), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 201/641 (31%), Positives = 325/641 (50%), Gaps = 85/641 (13%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  L+ G   VN  +   A+  F   L + P    A +GRGTA A     E AI DFT 
Sbjct: 206 IDKELAMGYLYVNNNRVKEAVDYFTVFLNKYPNVVGAFLGRGTAFAMLSNFEKAIQDFTS 265

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
           AI+ +P  G+A+KRRGQ   A G+  E ++D +KA+E       D   +RG V    K++
Sbjct: 266 AIKYDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 325

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
                D    V+ +  + +++ +LGL  +++G   +A +A+ +A+Q+  +F+E + +L Q
Sbjct: 326 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 385

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS---------- 609
            ++D  N +++ +   ++  +    S  +++ G+L    G H  AIK+ +          
Sbjct: 386 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFTLAITNRNEPV 445

Query: 610 SGLGIDPSNI-ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
           SG+  DP  + E    R     A G++R A+KD++ A++L+ D          A+Y KEI
Sbjct: 446 SGIAKDPDRMCEAWRYRGVTRSASGQFRLAVKDFECAMELKSDDT--------AWYMKEI 497

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQ 728
           ALYT   +N  F  +D++    P FKE +CK L P     +   QPP  +S+    +  +
Sbjct: 498 ALYTHHHLNKPFEEWDLES-FYPFFKEGFCKHLIPA-ALHRYEEQPPFEESI--SDVDEK 553

Query: 729 DFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAE 788
                     +++ A +IGK +QYD  GF+ N+ Q+ MAG+AAIE+A+K+    R +  E
Sbjct: 554 SLPSQNVINKVIIPAMNIGKYMQYDSQGFVHNKAQYLMAGMAAIEMAKKI----RDILPE 609

Query: 789 WKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGH-PKMSW 847
           W +                                         G+TEE++  +  K+ W
Sbjct: 610 WVFG----------------------------------------GLTEEQAKPYIGKLHW 629

Query: 848 QDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLD 906
           +DV  +AVKWRQISEP DPV W++ L+ E+F  GFGSHTPM +GQ +VVRY+  Y R  +
Sbjct: 630 RDVMKIAVKWRQISEPNDPVYWIDLLTHEQFEEGFGSHTPMFIGQTRVVRYYCQYQRAFE 689

Query: 907 VAKTVMKDKKYVHNK-------ADDIIDLSEDVVGEDFWLATWCNSTAFEG-------KQ 952
           + K ++ ++  +  +       A +I D+  D++  DF + T C S  F+        + 
Sbjct: 690 IVKKLLPEQLKIKEEWVKKVQTAKNIQDIL-DIIKSDFHVITPCKSLYFDDPDKPGTKRT 748

Query: 953 LEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWE 993
            EGTR+ +      GY+FAI+TPCT  RW  +D E+T  W+
Sbjct: 749 YEGTRLVVEIKQPVGYEFAIKTPCTMPRWKLYDEELTECWK 789


>gi|449705635|gb|EMD45644.1| tetratricopeptide repeatcontaining protein [Entamoeba histolytica
           KU27]
          Length = 917

 Score =  316 bits (809), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 201/641 (31%), Positives = 325/641 (50%), Gaps = 85/641 (13%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  L+ G   VN  +   A+  F   L + P    A +GRGTA A     E AI DFT 
Sbjct: 206 IDKELAMGYLYVNNNRVKEAVDYFTVFLNKYPNVVGAFLGRGTAFAMLSNFEKAIQDFTS 265

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
           AI+ +P  G+A+KRRGQ   A G+  E ++D +KA+E       D   +RG V    K++
Sbjct: 266 AIKYDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 325

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
                D    V+ +  + +++ +LGL  +++G   +A +A+ +A+Q+  +F+E + +L Q
Sbjct: 326 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 385

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS---------- 609
            ++D  N +++ +   ++  +    S  +++ G+L    G H  AIK+ +          
Sbjct: 386 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFTLAITNRNEPV 445

Query: 610 SGLGIDPSNI-ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
           SG+  DP  + E    R     A G++R A+KD++ A++L+ D          A+Y KEI
Sbjct: 446 SGIAKDPDRMCEAWRYRGVTRSASGQFRLAVKDFECAMELKSDDT--------AWYMKEI 497

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQ 728
           ALYT   +N  F  +D++    P FKE +CK L P     +   QPP  +S+    +  +
Sbjct: 498 ALYTHHHLNKPFEEWDLES-FYPFFKEGFCKHLIPA-ALHRYEEQPPFEESI--SDVDEK 553

Query: 729 DFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAE 788
                     +++ A +IGK +QYD  GF+ N+ Q+ MAG+AAIE+A+K+    R +  E
Sbjct: 554 SLPSQNVINKVIIPAMNIGKYMQYDSQGFVHNKAQYLMAGMAAIEMAKKI----RDILPE 609

Query: 789 WKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGH-PKMSW 847
           W +                                         G+TEE++  +  K+ W
Sbjct: 610 WVFG----------------------------------------GLTEEQAKPYIGKLHW 629

Query: 848 QDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLD 906
           +DV  +AVKWRQISEP DPV W++ L+ E+F  GFGSHTPM +GQ +VVRY+  Y R  +
Sbjct: 630 RDVMKIAVKWRQISEPNDPVYWIDLLTHEQFEEGFGSHTPMFIGQTRVVRYYCQYQRAFE 689

Query: 907 VAKTVMKDKKYVHNK-------ADDIIDLSEDVVGEDFWLATWCNSTAFEG-------KQ 952
           + K ++ ++  +  +       A +I D+  D++  DF + T C S  F+        + 
Sbjct: 690 IVKKLLPEQLKIKEEWVKKVQTAKNIQDIL-DIIKSDFHVITPCKSLYFDDPDKPGTKRT 748

Query: 953 LEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWE 993
            EGTR+ +      GY+FAI+TPCT  RW  +D E+T  W+
Sbjct: 749 YEGTRLVVEIKQPVGYEFAIKTPCTMPRWKLYDEELTECWK 789


>gi|407042897|gb|EKE41609.1| TPR repeat protein [Entamoeba nuttalli P19]
          Length = 915

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 201/641 (31%), Positives = 325/641 (50%), Gaps = 85/641 (13%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  L+ G   VN  +   A+  F   L + P    A +GRGTA A     E AI DFT 
Sbjct: 204 IDKELAMGYLYVNNNRVKEAVDYFTVFLNKYPNVVGAFLGRGTAFAMLSNFEKAIQDFTS 263

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
           AI+ +P  G+A+KRRGQ   A G+  E ++D +KA+E       D   +RG V    K++
Sbjct: 264 AIKYDPKCGDAYKRRGQTLVACGKLYEGLEDFNKAIELSNGKDGDCYAQRGSVYQMLKNY 323

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
                D    V+ +  + +++ +LGL  +++G   +A +A+ +A+Q+  +F+E + +L Q
Sbjct: 324 EKGRADFREAVRKNSMDFNSWNHLGLNNNALGLVAEAADAYARALQIKDDFIECYVNLAQ 383

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS---------- 609
            ++D  N +++ +   ++  +    S  +++ G+L    G H  AIK+ +          
Sbjct: 384 LHKDAGNFQRSKDVFNKLFRMQPNHSNGHYICGVLYQQSGYHLAAIKEFTLAITNRNEPI 443

Query: 610 SGLGIDPSNI-ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
           SG+  DP  + E    R     A G++R A+KD++ A++L+ D          A+Y KEI
Sbjct: 444 SGIAKDPERMCEAWRYRGVTRSASGQFRLAVKDFECAMELKSDDT--------AWYMKEI 495

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQ 728
           ALYT   +N  F  +D++    P FKE +CK L P  +  +   QPP  +S+    +  +
Sbjct: 496 ALYTHHHLNKPFEEWDLES-FYPFFKEGFCKHLIPAAL-HRYEEQPPFEESI--SDVDEK 551

Query: 729 DFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAE 788
                     +++ A +IGK +QYD  GF+ N+ Q+ MAG+AAIE+A+K+    R +  E
Sbjct: 552 SLPSQNVINKVIIPAMNIGKYMQYDSQGFVHNKAQYLMAGMAAIEMAKKI----RDVLPE 607

Query: 789 WKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGH-PKMSW 847
           W +                                         G+TEE++  +  K+ W
Sbjct: 608 WVFG----------------------------------------GLTEEQAKPYIGKLHW 627

Query: 848 QDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLD 906
           +DV  +AVKWRQISEP DPV W++ L+ E+F  GFGSHTPM +GQ +VVRY+  Y R  +
Sbjct: 628 RDVMKIAVKWRQISEPNDPVYWIDLLTHEQFEEGFGSHTPMFIGQTRVVRYYCQYQRAFE 687

Query: 907 VAKTVMKDKKYVH-------NKADDIIDLSEDVVGEDFWLATWCNSTAFEG-------KQ 952
           + K ++ ++  +          A +I D+  D++  DF + T C S  F+        + 
Sbjct: 688 ILKKLLPEQLKIKEDWVKKVQTAKNIQDIL-DIIKSDFHVITPCKSLYFDDPDKPGTKRT 746

Query: 953 LEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWE 993
            EGTR+ +      GY+FAI+TPCT  RW  +D E+T  W+
Sbjct: 747 YEGTRLVVEIKQPVGYEFAIKTPCTMPRWKLYDEELTECWK 787


>gi|440291767|gb|ELP85009.1| tetratricopeptide repeat protein, putative [Entamoeba invadens IP1]
          Length = 926

 Score =  292 bits (748), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 195/649 (30%), Positives = 322/649 (49%), Gaps = 90/649 (13%)

Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
           +++  + +D  L+ G   VN  K   A+  F   L + P     L+GRG+A A     + 
Sbjct: 210 NRTNDVVIDKELAMGYLYVNNNKLTEAVEYFTTFLSKYPNVVGGLLGRGSAYAMLARFQE 269

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIV 492
           AI DFT+AI+ +P+ G+++KRRGQ  AA G    A+ D +KA+E  +   AD   +RG +
Sbjct: 270 AIVDFTQAIKIDPTCGDSYKRRGQTLAATGNLERALHDFNKAIELCKETDADCYSQRGSL 329

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             ++K++  A +D    +KL+  + SA+ +LGL  +++G   +A +A+++A+Q++  ++E
Sbjct: 330 FQQYKNYELAKDDFKKSLKLNASDASAWNHLGLNNNALGLIDEAADAYVRALQINDKYVE 389

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            + +L Q  +D    +K+ +   ++  +    S A+++ G+L    G H  A+ +  + L
Sbjct: 390 CYVNLAQLQKDAGQFQKSKDIFMKLFRMCPTHSYAHYVCGVLYQQNGMHTAAVNEFKAAL 449

Query: 613 G--IDPSN---------IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
               DP           +EC         A G YR A+ DY+ AL +E           +
Sbjct: 450 DNRTDPQYGLEKDKEKLLECWRYSGVTKTACGFYRSAVTDYNTALGMESAD--------V 501

Query: 662 AFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLK 721
           ++Y KE++LY+   ++     +D++  + P FKE +CK+L P  + + V + P       
Sbjct: 502 SWYMKEVSLYSHHLLDKPLKEWDLESFL-PSFKEGFCKKLIPAALIQYVEQNP-----FD 555

Query: 722 KGKLRRQDFSVTKQKT--ALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVS 779
              L   + SV  QK   ++L  A SIG  I+YD  GF+ N+RQ  MAGLAAIE+ Q + 
Sbjct: 556 SKILDVDEKSVPNQKLIESVLEPAMSIGNYIKYDSQGFVGNKRQFMMAGLAAIEMGQYI- 614

Query: 780 KIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERS 839
              R    EW +                                         G+T E++
Sbjct: 615 ---RDKLPEWVFG----------------------------------------GLTVEQA 631

Query: 840 SGH-PKMSWQDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRY 897
             +  K+ W+D+  + VKWRQ+SEP D V W++ L+ E+F  GFGSHT M +GQ +VVRY
Sbjct: 632 QRYLDKIKWRDLLNIPVKWRQLSEPNDQVYWIDLLTNEQFEEGFGSHTAMFIGQTRVVRY 691

Query: 898 FPNYARTLDVAKTV------MKDKKYVHNKADDIIDLSE--DVVGEDFWLATWCNSTAFE 949
           +  + R   + K +      MKD   +  K  +  D+ E  D++  DF + T C S  F+
Sbjct: 692 YCQFERAFKMVKQLLPGQISMKDD--MAEKVRNAKDMKEILDLLKSDFQVTTPCKSANFD 749

Query: 950 GKQLEGTRI------TLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAW 992
                G ++       +V+  E GY+FAI+TPCT  RW  +D E+   W
Sbjct: 750 DPNHPGQKVRYDGTYLIVERKEPGYEFAIKTPCTLKRWKLYDKELEACW 798


>gi|414592088|tpg|DAA42659.1| TPA: hypothetical protein ZEAMMB73_482269 [Zea mays]
          Length = 363

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 157/299 (52%), Positives = 196/299 (65%), Gaps = 36/299 (12%)

Query: 766  MAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSS 825
            MAGLAAIEIAQKVSK WR L        R+     K  R++D++N+ SQNRGG  CSTS+
Sbjct: 1    MAGLAAIEIAQKVSKAWRFL--------RNPKNIAKLVRKRDKLNM-SQNRGGY-CSTST 50

Query: 826  SSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKLSEEFNSGFGSHT 885
             + + +    E+R S    +SWQDVY +AVKWRQISEPCDPVVWVNKLSEEFNSGFGSHT
Sbjct: 51   LAGSPTSSPNEDRVSSGISLSWQDVYNIAVKWRQISEPCDPVVWVNKLSEEFNSGFGSHT 110

Query: 886  PMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDLSE--------------- 930
            PM+LGQAKV+RY+P Y R L+ AKT+M D KYV+N  D  I L++               
Sbjct: 111  PMLLGQAKVIRYYPYYQRVLETAKTIMLDLKYVNNAEDRAIFLTDIDKLKKIEIASSCSD 170

Query: 931  --DVVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
               VVGE +W+AT C+S AF G++LEGTRIT   +G++G+DFAIRTPCTPSRW+E+D EM
Sbjct: 171  LYHVVGETYWVATRCDSMAFRGRRLEGTRITTQNIGKTGFDFAIRTPCTPSRWEEYDEEM 230

Query: 989  TMAWEVDWEAILNS-----DPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVV 1042
            T AWE   EA  N      DP   LD+VK  +   L+ +  W  +  ++   A  G VV
Sbjct: 231  TAAWEAICEAYCNDTNPTRDPG-VLDAVKDAI---LRMTYYWYNFMPLSRGSAVVGYVV 285



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 44/57 (77%)

Query: 993  EVDWEAILNSDPHFFLDSVKSWLYPSLKTSTSWKEYPDVTSTFATTGSVVAALSSYD 1049
            +VDWEAIL+ DP  F+D+VK WLYPS K S   K+Y DV+  F+TTGSVVAAL+S D
Sbjct: 306  QVDWEAILSPDPGTFVDAVKPWLYPSTKISRCLKDYTDVSCAFSTTGSVVAALTSVD 362


>gi|407034776|gb|EKE37387.1| TPR repeat protein [Entamoeba nuttalli P19]
          Length = 931

 Score =  282 bits (722), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 193/639 (30%), Positives = 313/639 (48%), Gaps = 82/639 (12%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  L+ G   VN GK   A++   + L++ P      I RGTA A   + + A+ DF+ 
Sbjct: 221 IDQELAIGYLLVNNGKLQEAVNYLTKFLQKHPNVCGGYIARGTAYAMIGQYQMAVEDFSS 280

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
           A+  +P+  +A KRRGQ   ALG+  EA+ D++ A+++      D   +RGI     +++
Sbjct: 281 AVIIDPTNADAHKRRGQTLIALGKIDEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 340

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A +D   CVK  + +  A+ + GL  +++G +K+A EA  +A+ + ++F++ + +L Q
Sbjct: 341 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 400

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL------- 612
             +D    +KA E  + +  +      A++LRG+L   +G H KA K+ +  +       
Sbjct: 401 LLKDAGKPKKAEEVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFAIAISNVNNQQ 460

Query: 613 -GIDPS---NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
            G++      ++          A G+++EAI  +D A+D++ D          A+Y KE+
Sbjct: 461 YGLEKEIDKQVDLYRYNGVTLSASGQFKEAILSFDQAVDIKSDDS--------AWYMKEV 512

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQ 728
           ALYT   ++  F  ++ID   DPLFKE +CK L P     +   Q    D++    +   
Sbjct: 513 ALYTHHLLDHNFTEWNIDS-FDPLFKEGFCKHLIPA-ALHRYEEQASYDDTIP--DVSET 568

Query: 729 DFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAE 788
           D         +L+ A +IGK +QYD  GF+ N  Q+ M GLAAI I Q +    R    E
Sbjct: 569 DLPSQSVIDKILIPAMNIGKYMQYDSQGFVHNASQYLMGGLAAINIGQYI----RETIPE 624

Query: 789 WKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQ 848
           W                          +GG         + S+  + +       K+ W+
Sbjct: 625 WI-------------------------KGGL-------DEESARKLLD-------KIQWR 645

Query: 849 DVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLDV 907
            +  L+ KWRQISEP DPV W++ L+ E+F  GFGSHTPM  GQ +V+RYF  Y R   +
Sbjct: 646 TLMELSTKWRQISEPNDPVYWIDLLTPEQFEEGFGSHTPMYTGQGRVIRYFCQYDRAFKI 705

Query: 908 AKTVMKDKKY-------VHNKADDIIDLSEDVVGEDFWLATWCNSTAFE----GKQL--E 954
            + ++  +         V  +A +I D+   VV  +F + T C S  F+    G+++  E
Sbjct: 706 VQELLPKQVQLKPEWVKVVKEAKNIGDILR-VVESNFQVTTPCRSDNFDDPKTGERIIYE 764

Query: 955 GTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWE 993
           GT +        GYDFAI+TPC  SRW  +D E+   W+
Sbjct: 765 GTNLVTEMKEPVGYDFAIKTPCKKSRWILYDKELEACWK 803


>gi|67469147|ref|XP_650565.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
 gi|56467204|gb|EAL45179.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
          Length = 931

 Score =  282 bits (721), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 194/639 (30%), Positives = 312/639 (48%), Gaps = 82/639 (12%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  L+ G   VN GK   AI+   + L++ P      I RGTA A   + + A+ DF  
Sbjct: 221 IDQELAIGYLLVNNGKLQEAINYLTKFLQKHPDVCGGYIARGTAYAMIGQYQMAVEDFGS 280

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
           A+  +P   +A KRRGQ   ALG+  EA+ D++ A+++      D   +RGI     +++
Sbjct: 281 AVIIDPRNADAHKRRGQTLIALGKIDEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 340

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A +D   CVK  + +  A+ + GL  +++G +K+A EA  +A+ + ++F++ + +L Q
Sbjct: 341 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 400

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL------- 612
             +D    +KA E  + +  +      A++LRG+L   +G H KA K+ +  +       
Sbjct: 401 LLKDAGKPKKAEEVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFAIAISNVNNQQ 460

Query: 613 -GIDPS---NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
            G++      ++          A G+++EAI+ +D A+D++ D          A+Y KE+
Sbjct: 461 YGLEKEIDKQVDLYRYNGVTLSASGQFKEAIRSFDQAVDIKSDDS--------AWYMKEV 512

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQ 728
           ALYT   ++  F  ++ID   DPLFKE +CK L P     +   Q    D++    +   
Sbjct: 513 ALYTHHLLDHNFTEWNIDS-FDPLFKEGFCKHLIPA-ALHRYEEQASYDDTIP--DVSET 568

Query: 729 DFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAE 788
           D         +L+ A +IGK +QYD  GF+ N  Q+ M GLAAI I Q +    R    E
Sbjct: 569 DLPSQSVIDQILIPAMNIGKYMQYDSQGFVHNASQYLMGGLAAINIGQYI----RETIPE 624

Query: 789 WKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQ 848
           W                          +GG         + S+  + +       K+ W+
Sbjct: 625 WI-------------------------KGGL-------DEESARKLLD-------KIQWR 645

Query: 849 DVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLDV 907
            +  L+ KWRQISEP DPV W++ L+ E+F  GFGSHTPM  GQ +V+RYF  Y R   +
Sbjct: 646 TLMELSTKWRQISEPNDPVYWIDLLTPEQFEEGFGSHTPMYTGQGRVIRYFCQYDRAFKI 705

Query: 908 AKTVMKDKKY-------VHNKADDIIDLSEDVVGEDFWLATWCNSTAFE----GKQL--E 954
            + ++  +         V  +A +I D+   VV  +F + T C S  F+    G+++  E
Sbjct: 706 VQELLPKQVQLKPEWVKVVKEAKNIGDILR-VVESNFQVTTPCRSDNFDDPKTGERIIYE 764

Query: 955 GTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWE 993
           GT +        GYDFAI+TPC  SRW  +D E+   W+
Sbjct: 765 GTNLVTEMKEPVGYDFAIKTPCKKSRWILYDKELEACWK 803


>gi|167382099|ref|XP_001735971.1| tetratricopeptide repeat protein [Entamoeba dispar SAW760]
 gi|165901772|gb|EDR27784.1| tetratricopeptide repeat protein, putative [Entamoeba dispar
           SAW760]
          Length = 933

 Score =  282 bits (721), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 194/641 (30%), Positives = 309/641 (48%), Gaps = 86/641 (13%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  L+ G   VN GK   A++   + L++ P      I RGTA A   + + A+ DF  
Sbjct: 223 IDQELAIGYLLVNNGKLQEAVNYLTKFLQKHPNVCGGYIARGTAFAMIGQYQMAVEDFGS 282

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
           A+  +P+  +A KRRGQ   ALG+  EA+ D++ A+++      D   +RGI     +++
Sbjct: 283 AVDIDPTNADAHKRRGQTLIALGKINEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 342

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A +D   CVK  + +  A+ + GL  +++G +K+A EA  +A+ + ++F++ + +L Q
Sbjct: 343 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 402

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG------ 613
             +D     KA +  + +  +      A++LRG+L   +G H KA K+ +  +       
Sbjct: 403 LLKDAGKPNKAEDVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFAIAIANVNNQQ 462

Query: 614 ------IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
                 ID   ++          A G+++EAI  +D A+D++ D          A+Y KE
Sbjct: 463 YGLEKEID-KQVDLYRYNGVTLSASGQFKEAISSFDQAIDIKSDDT--------AWYMKE 513

Query: 668 IALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRR 727
           +ALYT   ++  F  ++ID   DPLFKE +CK L P     +   Q    D++    +  
Sbjct: 514 VALYTHHLLDHNFTEWNIDS-FDPLFKEGFCKHLIPA-ALHRYEEQSSYDDTIP--DINE 569

Query: 728 QDFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQA 787
            D         +L+ A +IGK +QYD  GF+ N  Q+ M GLAAI I Q +    R    
Sbjct: 570 TDLPSQDVIDKILIPAMNIGKYMQYDSQGFVHNASQYLMGGLAAINIGQYI----RETIP 625

Query: 788 EWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSG-HPKMS 846
           EW         NG                                G+ EE +     K+ 
Sbjct: 626 EW--------ING--------------------------------GLDEESAMKLLDKIR 645

Query: 847 WQDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTL 905
           W+ +  L+ KWRQISEP DPV W++ L+ E+F  GFGSHTPM  GQ +V+RYF  Y R  
Sbjct: 646 WRTLMELSTKWRQISEPNDPVYWIDLLTPEQFEEGFGSHTPMYTGQGRVIRYFCQYDRAF 705

Query: 906 DVAKTVMKDKKYVH-------NKADDIIDLSEDVVGEDFWLATWCNSTAFE----GKQL- 953
            + + ++  +  +         +A +I D+   VV  +F + T C S  F+    G+++ 
Sbjct: 706 KIVQELLPKQVQLKPEWAKAVTEAKNIGDILR-VVESNFQVTTPCRSDNFDDPKTGERII 764

Query: 954 -EGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWE 993
            EGT +        GYDFAI+TPC  SRW  +D E+   W+
Sbjct: 765 YEGTNLVTEIKEPIGYDFAIKTPCKKSRWILYDKELEACWK 805


>gi|449708373|gb|EMD47849.1| tetratricopeptide repeatcontaining protein [Entamoeba histolytica
           KU27]
          Length = 793

 Score =  281 bits (718), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 194/639 (30%), Positives = 313/639 (48%), Gaps = 82/639 (12%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  L+ G   VN GK   AI+   + L++ P      I RGTA A   + + A+ DF  
Sbjct: 83  IDQELAIGYLLVNNGKLQEAINYLTKFLQKHPDVCGGYIARGTAYAMIGQYQMAVEDFGS 142

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDF 499
           A+  +P   +A KRRGQ   ALG+  EA+ D++ A+++      D   +RGI     +++
Sbjct: 143 AVIIDPRNADAHKRRGQTLIALGKIDEALVDMNDAVKYGGEKDVDCYKQRGICYQMIRNY 202

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A +D   CVK  + +  A+ + GL  +++G +K+A EA  +A+ + ++F++ + +L Q
Sbjct: 203 ELARDDFGVCVKRSQGDYIAWNHYGLNNTALGLFKEAAEAFGRAVSIKQDFVDGYVNLFQ 262

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL------- 612
             +D    +KA E  + +  +      A++LRG+L   +G H KA K+ +  +       
Sbjct: 263 LLKDAGKPKKAEEVFKIIFRLAPNHCFAHYLRGVLFQQIGHHIKATKEFAIAISNVNNQQ 322

Query: 613 -GIDPS---NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
            G++      ++          A G+++EAI+ +D A+D++ D          A+Y KE+
Sbjct: 323 YGLEKEIDKQVDLYRYNGVTLSASGQFKEAIRSFDQAVDIKSDDS--------AWYMKEV 374

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQ 728
           ALYT   ++  F  ++ID   DPLFKE +CK L P  +  +   Q    D++    +   
Sbjct: 375 ALYTHHLLDHNFTEWNIDS-FDPLFKEGFCKHLIPAAL-HRYEEQASYDDTIP--DVSET 430

Query: 729 DFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAE 788
           D         +L+ A +IGK +QYD  GF+ N  Q+ M GLAAI I Q +    R    E
Sbjct: 431 DLPSQSVIDQILIPAMNIGKYMQYDSQGFVHNASQYLMGGLAAINIGQYI----RETIPE 486

Query: 789 WKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQ 848
           W                          +GG         + S+  + +       K+ W+
Sbjct: 487 WI-------------------------KGGL-------DEESARKLLD-------KIQWR 507

Query: 849 DVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLDV 907
            +  L+ KWRQISEP DPV W++ L+ E+F  GFGSHTPM  GQ +V+RYF  Y R   +
Sbjct: 508 TLMELSTKWRQISEPNDPVYWIDLLTPEQFEEGFGSHTPMYTGQGRVIRYFCQYDRAFKI 567

Query: 908 AKTVMKDKKY-------VHNKADDIIDLSEDVVGEDFWLATWCNSTAFE----GKQL--E 954
            + ++  +         V  +A +I D+   VV  +F + T C S  F+    G+++  E
Sbjct: 568 VQELLPKQVQLKPEWVKVVKEAKNIGDILR-VVESNFQVTTPCRSDNFDDPKTGERIIYE 626

Query: 955 GTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWE 993
           GT +        GYDFAI+TPC  SRW  +D E+   W+
Sbjct: 627 GTNLVTEMKEPVGYDFAIKTPCKKSRWILYDKELEACWK 665


>gi|440289940|gb|ELP83394.1| tetratricopeptide repeat protein, putative [Entamoeba invadens IP1]
          Length = 898

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 182/642 (28%), Positives = 310/642 (48%), Gaps = 90/642 (14%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D +L+ G   VN GK   AI    Q L + P      I RGTA A       A++DF  
Sbjct: 185 IDQQLAMGYFLVNNGKLQDAIKYLTQFLVKYPKVAGGYIARGTALAMGGAFNEAVADFGS 244

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDF 499
           AI  +P   +A KRRGQ    +G+  EA+ D+  A++  +    D+  +RGIV+   +++
Sbjct: 245 AITLDPDNFDAHKRRGQTLIGIGKLPEALADMDAAVKLSKGKDPDVYKQRGIVHQMMRNY 304

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A +D    VK    +  ++ + GL  +++G +++A E   +A+ ++  F+E + +L Q
Sbjct: 305 EKARDDFEVVVKKMPGDAVSWNHFGLNNTALGLFREAAEGFGRAVSINPEFVECYVNLAQ 364

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK----------DLS 609
             +D    ++A    + +     +   A++LRG++L  +G H +A K          D  
Sbjct: 365 LEKDAGQPKRAEGVFKIIFNKVPKHPFAHYLRGVMLQQIGNHIEATKEFDISVANMNDEK 424

Query: 610 SGLGIDPSNIECLY-LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
            G+  +   +  L+  R       G++R+A KD+D A +++ D          A+Y KE+
Sbjct: 425 YGMKTESDKVVDLWRYRGVTESGSGQFRKAAKDFDEASEIKCDDS--------AWYMKEV 476

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQ 728
           A+YT   ++ EF  +++D   DPLFKE +CK L P     +   QP   D++K   +   
Sbjct: 477 AMYTHHMLDKEFKKWNLDS-FDPLFKEGFCKHLIPA-ALHRYDEQPGFDDNVK--DITEN 532

Query: 729 DFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAE 788
           D    +    +L  A +IGK +QY+  GF+ N  Q+ MAG++AIEI     K+ R+   +
Sbjct: 533 DVPSEEVIKQILYPAMNIGKYMQYESQGFVHNVTQYLMAGMSAIEIG----KLIRARIPQ 588

Query: 789 WKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGH-PKMSW 847
           W                                        +  G+T+E +     K++W
Sbjct: 589 W----------------------------------------AKGGLTQEEAQKQIGKITW 608

Query: 848 QDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLD 906
           +++  ++ +WRQ+SEP DPV W++ L+ ++F  GFG+HTPM  GQ +V+RYF  Y R   
Sbjct: 609 REMMEISTRWRQVSEPNDPVFWIDGLTPDQFEEGFGAHTPMYTGQGRVIRYFCQYNRAFK 668

Query: 907 VAKTVMKDKKYVH----------NKADDIIDLSEDVVGEDFWLATWCNSTAFE----GKQ 952
           + + ++ ++  +              DDI+ L E     +F + T C S  F+    G++
Sbjct: 669 LVQKLLPEQVTLKPEWAKRVKEAKNIDDILKLVES----NFQVVTPCRSDNFDDPKTGER 724

Query: 953 L--EGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAW 992
           +  +GT +        GYDFAI+T C  SRW ++D E+   W
Sbjct: 725 IVYDGTNLVTEMKEPYGYDFAIKTTCKRSRWTQYDKELEACW 766


>gi|328872976|gb|EGG21343.1| Phosphatidylethanolamine N-methyltransferase [Dictyostelium
           fasciculatum]
          Length = 1335

 Score =  251 bits (641), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 159/473 (33%), Positives = 248/473 (52%), Gaps = 64/473 (13%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNS-ADILHERGIVNFKFKDFNAAVEDLSA 508
           +A+KRRGQ+  A G  + A+ D ++A+  +    +D+ + R ++ ++ +++  A++D   
Sbjct: 3   DAYKRRGQSLVAKGLDMAAMGDFTQAVALDKEGDSDLFYNRALLFYEMRNYERALKDFRR 62

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            V+LD +NK A+  +GL L+  G  ++A  A  KAI+LD NF  A+ ++ Q ++DL   +
Sbjct: 63  SVELDADNKLAWNRIGLCLNVQGYPRQAFSAFKKAIELDPNFEAAYTNIGQCWKDLGIYQ 122

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            +L      L I   +S A HLRGLL    G H  AIKD +  +  +P NI+   LRA  
Sbjct: 123 DSLASFNNALDISPSYSNALHLRGLLFFNSGYHLNAIKDWTEFIQNEPINIDVRQLRAIT 182

Query: 629 YHAIGEYREAIKDY---DAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
             +IG++++A+KDY   +   D+             ++YQKEI ++T   ++  F  F+I
Sbjct: 183 CTSIGKFKDALKDYRFINGINDIH-----------YSYYQKEILIFTCKHLDQPFDSFNI 231

Query: 686 DGDIDPLFKEYWCKRLHPKNVC-----EKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALL 740
           D  ++   K + C+R+ P  +      E+VY      D L K +    ++  T+ +  LL
Sbjct: 232 DRQVNVYIKTFLCQRVPPTTLVGYQSLEEVY-----WDELDKIQDVDLEYRPTQAELELL 286

Query: 741 LVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNG 800
            +A  IGKK+QYDC GFL N RQ    G+A +EIAQ +                      
Sbjct: 287 KLATPIGKKLQYDCEGFLPNHRQQLQCGMAVLEIAQTI---------------------- 324

Query: 801 KRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQI 860
           K    K+R+   +   G A          SS+         HP   W+D+Y +AVKWRQ 
Sbjct: 325 KSLLSKERMGDVALVNGRA----------SSW-----MEQDHP-FQWRDLYDIAVKWRQF 368

Query: 861 SEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVM 912
           SEP DPV WV+ LS E+F  GFGSHTP+I GQ  VVRY+P + R+  + K ++
Sbjct: 369 SEPNDPVWWVDCLSPEQFQEGFGSHTPLITGQTNVVRYYPMFERSFALMKKLL 421



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 52/103 (50%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A S F +AI+ +P+   A+   GQ    LG   +++   + AL+  P+ ++ LH RG++ 
Sbjct: 90  AFSAFKKAIELDPNFEAAYTNIGQCWKDLGIYQDSLASFNNALDISPSYSNALHLRGLLF 149

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           F       A++D +  ++ +  N        +  +SIG++K A
Sbjct: 150 FNSGYHLNAIKDWTEFIQNEPINIDVRQLRAITCTSIGKFKDA 192


>gi|281207321|gb|EFA81504.1| tetratricopeptide-like helical domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 763

 Score =  242 bits (617), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 134/399 (33%), Positives = 238/399 (59%), Gaps = 13/399 (3%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +S+G   VN G Y  AI +F  I+  +P+ P A +GRGT+ A    L+ AI DF++ I+ 
Sbjct: 234 ISKGNYMVNSGLYEEAIQLFTLIINSNPLIPSAYLGRGTSNAITGNLDDAIYDFSKVIEL 293

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-PNSADILHERGIVNFKFKDFNAAV 503
           + + G+A+KRRGQ+R A G   EA++D ++A  F+  N +DI ++RG+++++ +++  A+
Sbjct: 294 DNTMGDAYKRRGQSRVAKGMDFEALEDFNQAAIFDRDNDSDIYYQRGLLHYQMRNYERAL 353

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           +D    V+ D+ NK A+  +GL L+  G  ++A +A  +AI+LD  F  A+ ++ Q +++
Sbjct: 354 KDFRKVVEFDRRNKLAWNRVGLCLNIRGFPREAFDAFDRAIELDSQFEAAFTNVGQCWKE 413

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + + +++ +   Q L I   +S A HLRG+L    G+H +AI+D +  L  D +  +   
Sbjct: 414 IGDYDRSYDAFTQALSIAPNYSNALHLRGILFFNSGKHLQAIQDWTDFLDQDSTIADLRQ 473

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWF 683
           LRA    +IG+YR++I D++    +E + +        ++YQ+EIAL+T  ++++    +
Sbjct: 474 LRAISNCSIGKYRDSIVDFNYI--VENNQLH------YSYYQREIALFTHHRLDTPLNGY 525

Query: 684 DIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVA 743
           ++D  ++   K + C+R+ P ++      Q  L +S+    L   ++   + +  L+  A
Sbjct: 526 NMDRLMNVYIKTFLCQRVAPSSLV-GYNPQAELSESIVDVDL---NYKGNESEQKLIDSA 581

Query: 744 DSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIW 782
             IG+K+QYDC GFL N+RQH   GLAAI+IAQ + KIW
Sbjct: 582 LRIGRKLQYDCEGFLPNKRQHLQCGLAAIDIAQTLKKIW 620



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 40/61 (65%)

Query: 932 VVGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMA 991
           V+ +DF++ T C S+      +EGTR+TL  +   GY+FAIRTPCTP RW  +D EMT  
Sbjct: 678 VMKKDFFVVTPCYSSYRPNTVMEGTRLTLQFVYPEGYEFAIRTPCTPERWQLYDQEMTHI 737

Query: 992 W 992
           W
Sbjct: 738 W 738



 Score = 44.3 bits (103), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)

Query: 32  VMASAITARIELAKLCSLRNWSKAIRILDSLL-AQSYEIQDICNRAFCYSQLELHKHVIR 90
           +M S  + R E  K     N+S++I++++ ++ +   ++  I NRA C+ +LEL++H I+
Sbjct: 17  MMESIESIRKEAIKCYQNANYSESIKLINKIIQSDRNDLTAISNRATCHYKLELYQHCIK 76

Query: 91  DCDKALQLDP 100
           DCD  L   P
Sbjct: 77  DCDTVLASQP 86


>gi|440294379|gb|ELP87396.1| tetratricopeptide repeat protein, tpr, putative [Entamoeba invadens
            IP1]
          Length = 915

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 182/658 (27%), Positives = 311/658 (47%), Gaps = 100/658 (15%)

Query: 376  SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
            +  + +D ++++G   VN GK   AI  FDQ+LK  P      +GRG+ARA   +L+ A+
Sbjct: 242  TNDLELDKQIAKGYLYVNTGKMQDAIKHFDQLLKAHPELIAGYLGRGSARAMSGDLKRAL 301

Query: 436  SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            +DF +A++ N    +A+KRRGQ +AALG    A+ D ++A++  P  AD   +RG +   
Sbjct: 302  TDFDKAVKINAKCADAYKRRGQVKAALGNVNGALDDFTQAIKLSPEEADSYRQRGSLFHS 361

Query: 496  FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
               F+ A +DL   +K    +      L L  + +G   +A  A+ +AI    N+ + + 
Sbjct: 362  LGVFDKASDDLKKSLKYAPGDAQVINELALCFNGMGLVDEAINAYTRAINAKENYADPYI 421

Query: 556  HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
            HL Q Y+D+    ++ + L++ + +      +Y++ G +L   G+H++A+  L   + + 
Sbjct: 422  HLGQLYRDMGCYIRSKQMLEKAMKLAPTNHLSYYVLGNVLVSSGRHREALPFLQKSIELC 481

Query: 616  PSNI--ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTA 673
            P +   E + + A+ Y A+G+ R         L L++  +        ++Y  E+A Y+A
Sbjct: 482  PKDNCGEIVRMCAAAYLALGQNR---------LCLQMSKLGSEAKDNASWYYGELAKYSA 532

Query: 674  SKINSEFCWFDIDGDIDPLFKEYW----CKRLHPKNVCE---KVYRQPPLRDSLKKGKLR 726
              ++ +F  +DI+      F   W     KRL   NV +       QP     ++     
Sbjct: 533  MMLDKKFLEYDIE-----WFPSQWKVNFAKRLPNTNVTKYPTGTKLQPITTPDIEAKDSI 587

Query: 727  RQDFSVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQ 786
            +QD  +      LL  A  IG+K+QY+  GF  N RQ+   GLA+I  AQ +        
Sbjct: 588  KQDLVMK-----LLSPAVKIGEKMQYNEIGFGKNGRQYLCCGLASIYYAQLL-------- 634

Query: 787  AEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMS 846
                       K+G+R   +D   I                                   
Sbjct: 635  -----------KSGERPEWRDLAEI----------------------------------- 648

Query: 847  WQDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTL 905
                    VK+RQI+EP D  +W+NKL+ ++F  GFGS+T +   Q +V RY+P + RT 
Sbjct: 649  -------VVKFRQIAEPADGAIWINKLTKQQFEDGFGSNTTLKTAQTRVARYWPMFPRTF 701

Query: 906  DVAKTVMK-------DKKYVHNKADDIIDLSEDVVGEDFWLATWCNSTAFEGKQLEGTRI 958
             + K +         DKK   N  DD+ ++ + +  +++++ T C + A  G +LEGT +
Sbjct: 702  ALFKKLFTEQTNFPADKKERVNATDDVDEVRKIINRDNYYMTTICRNEA--GDKLEGTWL 759

Query: 959  TLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLY 1016
             L++  E G  F+I+TPC P R++ FD E+  A +  +  I + D    LD+V  + Y
Sbjct: 760  -LIEKSELGSMFSIKTPCLPKRFNSFDKELKSALDKFYTVIDSKDKDKVLDAVLRYCY 816


>gi|390477670|ref|XP_002807781.2| PREDICTED: tetratricopeptide repeat protein 13 [Callithrix jacchus]
          Length = 726

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 187/717 (26%), Positives = 330/717 (46%), Gaps = 110/717 (15%)

Query: 380  SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
            S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 61   STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 120

Query: 435  ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
            + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 121  LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 179

Query: 495  KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 180  ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 239

Query: 555  GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
              L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 240  KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 299

Query: 615  DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
            +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 300  EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 359

Query: 674  SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
            + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 360  AHLDTPLTEYNIDMDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 415

Query: 734  KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
            K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 416  KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 466

Query: 793  NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
            N     NG     K R+                                   M W+D++ 
Sbjct: 467  NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 486

Query: 853  LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
            +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 487  IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 542

Query: 912  MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
            +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 543  IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 602

Query: 950  GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEA-----ILNSDP 1004
            GK+ +G  IT+         F++ T  T  R   + AE+   ++ D  A     IL+S+ 
Sbjct: 603  GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYK-DLTAKGKVLILSSE- 660

Query: 1005 HF--------FLDSVKSWLYPSLK------TSTSWKEYPDVTSTFATTGSVVAALSS 1047
             F         + S+  + Y  +        S S+K  P V+ TF T  S++  L++
Sbjct: 661  -FGEADTVCNLILSLVYYFYNLMPLSRGSSISPSYKTLPSVSETFPTLRSMIEVLNT 716


>gi|348538370|ref|XP_003456665.1| PREDICTED: tetratricopeptide repeat protein 13 [Oreochromis
           niloticus]
          Length = 826

 Score =  233 bits (595), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 170/634 (26%), Positives = 296/634 (46%), Gaps = 88/634 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFT 439
           L+ G   +  G Y  AI  F  +L+ DP    A+ GRG A   ++ Q  +  + A+ +  
Sbjct: 113 LAIGYVLIGNGLYDEAIKHFSLLLQGDPELVSAIYGRGIAYGKKSLQDIKNADLALYELN 172

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
             I   PS  E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+
Sbjct: 173 RVITLEPSWPEVYEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLLFISEDY 231

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
            AA+ED    ++L K    A  Y GL     G  K+A E   +A++L  +F++A+  L Q
Sbjct: 232 VAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGMLKEAIETFKEALKLKSDFIDAYKSLGQ 291

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            Y++L + E A+E  Q+ L +++   ++  LRG++L+  G  ++AI +    L ++P N 
Sbjct: 292 AYRELGDFESAMESFQKALMLNQNHIQSLQLRGMMLYHHGSLQEAIGNFKRCLQLEPYNE 351

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINS 678
            C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  S ++ 
Sbjct: 352 VCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLLGQKASSEYLKVKYLREYSRYLHSHLDI 411

Query: 679 EFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDF-SVTKQKT 737
               +++D D+   FK +W K L    + E    QP L+  +K   +  Q+F S + +  
Sbjct: 412 PVAEYNVDQDLPGNFKNHWAKNL--PFLIEDYEEQPGLQPHIK--DVLPQNFDSYSNEVQ 467

Query: 738 ALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSS 797
            L+  AD +G  +QYD PGFL NRR HR  GLA +E+ Q + + W         SN    
Sbjct: 468 KLICTADHLGALMQYDTPGFLPNRRIHRAMGLATLEVMQAMHRTW---------SNSKVR 518

Query: 798 KNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKW 857
            NGK                                          +M W+D++ +AVKW
Sbjct: 519 VNGKTR----------------------------------------QMQWRDMFDIAVKW 538

Query: 858 RQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKK 916
           R+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   +   LD     +KD+ 
Sbjct: 539 RRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQIINIRYLAYFDNILD----FIKDRI 594

Query: 917 YVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLE 954
            V+                   NK +D++ + +       + F + +   S    GK+ +
Sbjct: 595 LVYHGAYNPRGLLEVRQALENVNKVEDLLPIMKQFNSKTRDGFTVNSKVPSLKDPGKEYD 654

Query: 955 GTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           G  IT+         F++ T  T  R  ++ +E+
Sbjct: 655 GFTITITGDRVGNMLFSVETQTTEERTQQYQSEI 688


>gi|410925671|ref|XP_003976303.1| PREDICTED: tetratricopeptide repeat protein 13-like [Takifugu
           rubripes]
          Length = 824

 Score =  232 bits (591), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 171/643 (26%), Positives = 301/643 (46%), Gaps = 96/643 (14%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAA 434
           +++  L+ G   +  G Y  A+  F  +L+ DP    A+ GRG A   ++ Q  +  + A
Sbjct: 106 NINEELAIGYVLIGNGLYDEAVKHFSLLLQGDPELVSAIYGRGIAYGKKSLQDIKNADLA 165

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + +    I   P+  E +++R +  + LG   EA+ DLS+A++ +P SA +   RG + F
Sbjct: 166 LYELNRVITLEPNWPEVYEQRAEILSPLGRISEALADLSRAVQLQP-SARLYRHRGTLLF 224

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+ AA+ED    ++L K    A  Y GL     G  K+A E   +A++L  +F++A+
Sbjct: 225 ISEDYVAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFREALKLKSDFIDAY 284

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L + E A+E  Q+ L +D+   ++  LRG++L+  G  ++AI +    L +
Sbjct: 285 KSLGQAYRELGDFESAMESFQKALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNFKRCLQL 344

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKD-----YDAALDLELDSMEKFVLQCLAFYQKEIA 669
           +P N  C Y++   + A+G++ E IK       +A L  +  S E   ++    Y +E +
Sbjct: 345 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNAPLLGQKASSEYLKVK----YLREYS 400

Query: 670 LYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQD 729
            Y  S ++     +++D D+   FK +W K L    + E    QP L+  +K   +  Q+
Sbjct: 401 RYLHSHLDVPVAEYNVDQDLPGNFKNHWAKNL--PFLIEDYEEQPGLQPHIK--DVLPQN 456

Query: 730 F-SVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAE 788
           F S + +   L+  AD +G  +QYD PGFL N R HR  GLA +E+ Q + + W      
Sbjct: 457 FDSYSSEVQKLICTADHLGALMQYDTPGFLPNARIHRAMGLATVEVMQAMHRTW------ 510

Query: 789 WKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQ 848
              SN     NGK                                          +M W+
Sbjct: 511 ---SNSKVRVNGKTR----------------------------------------QMQWR 527

Query: 849 DVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDV 907
           D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   +   LD 
Sbjct: 528 DMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQIINIRYLAYFDSILD- 586

Query: 908 AKTVMKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNS 945
               +KD+  V+                   NK +D++ + + V     + F + +   S
Sbjct: 587 ---FIKDRILVYHGAYNPRGLLEVRQALENVNKVEDLLPIMKQVNSKTRDGFTVNSKVPS 643

Query: 946 TAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
               GK+ +G  IT+         F++ T  T  R  ++ +E+
Sbjct: 644 MKDPGKEYDGFTITITGDRVGNMLFSVETQTTEERTQQYQSEV 686


>gi|395531630|ref|XP_003767878.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 1
           [Sarcophilus harrisii]
          Length = 860

 Score =  230 bits (586), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 170/627 (27%), Positives = 295/627 (47%), Gaps = 88/627 (14%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFTEAIQSNP 446
           +  G Y  AI  F  +L+E+P    A+ GRG A   +  Q  +  E A+ + +  I   P
Sbjct: 154 IGSGLYDEAIRHFSSMLQEEPELVSAIYGRGIAYGKKGLQDIKNAELALFELSRVITLEP 213

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              E +++R +  + LG   EA+ DL+KA++ +P SA +   RG ++F  +D+  A ED 
Sbjct: 214 DRPEVFEQRAEILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDF 272

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N
Sbjct: 273 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGN 332

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++ 
Sbjct: 333 FEAATESFQRALILNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 392

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDI 685
             + A+G + E IK     +  +    +K   + L   Y +E + Y  + +++    ++I
Sbjct: 393 LSHVAMGHFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNI 452

Query: 686 DGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVAD 744
           D D+   FK++W K L    + E    QP L+  +K   +  Q+F   K     L+ VAD
Sbjct: 453 DVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLPQNFESYKPDVQELICVAD 508

Query: 745 SIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRAR 804
            +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +N     NG    
Sbjct: 509 RLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------ANSKVRMNG---- 555

Query: 805 RKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPC 864
            K R+                                   M W+D++ +AVKWR+I++P 
Sbjct: 556 -KTRL-----------------------------------MQWRDMFDIAVKWRRIADPD 579

Query: 865 DPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKAD 923
            PV+W++++ +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A+
Sbjct: 580 QPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGAN 635

Query: 924 DIIDL------------SEDVVG----------EDFWLATWCNSTAFEGKQLEGTRITLV 961
           +   L             ED++           + F + T   S   +GK+ +G  IT+ 
Sbjct: 636 NPKGLLEVREALEKVHKVEDLLPIMKQFNSKTRDGFTVNTKVPSLKDQGKEYDGFTITIT 695

Query: 962 KMGESGYDFAIRTPCTPSRWDEFDAEM 988
                   F++ T  T  R   + AE+
Sbjct: 696 GDKVGNILFSVETQTTEERTQLYHAEI 722


>gi|403300215|ref|XP_003940847.1| PREDICTED: tetratricopeptide repeat protein 13 [Saimiri boliviensis
           boliviensis]
          Length = 836

 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 298/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 118 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 177

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 178 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 236

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 237 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 296

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 297 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 356

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 357 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 416

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 417 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 472

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 473 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 523

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 524 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 543

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 544 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 599

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 600 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 659

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 660 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 698


>gi|410334037|gb|JAA35965.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
          Length = 859

 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 179/684 (26%), Positives = 315/684 (46%), Gaps = 91/684 (13%)

Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
           SD +   S+   S LS   + +   +      K+F       + + S +  L+     + 
Sbjct: 100 SDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFA----TDNDSTNEELAIAYVLIG 155

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
            G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A+ + +  I   P  
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED   
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQ 274

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E
Sbjct: 275 SLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFE 334

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   
Sbjct: 335 AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLS 394

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDG 687
           + A+G++ E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID 
Sbjct: 395 HVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDV 454

Query: 688 DIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSI 746
           D+   FK++W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +
Sbjct: 455 DLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRL 510

Query: 747 GKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRK 806
           G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K
Sbjct: 511 GSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----K 556

Query: 807 DRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDP 866
            R+                                   M W+D++ +AVKWR+I++P  P
Sbjct: 557 TRL-----------------------------------MQWRDMFDIAVKWRRIADPDQP 581

Query: 867 VVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDI 925
           V+W++++ +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A++ 
Sbjct: 582 VLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNP 637

Query: 926 IDL------------SEDVVG---------EDFWLATWCNSTAFEGKQLEGTRITLVKMG 964
             L             ED++          + F + T   S   +GK+ +G  IT+    
Sbjct: 638 KGLLEVREALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDK 697

Query: 965 ESGYDFAIRTPCTPSRWDEFDAEM 988
                F++ T  T  R   + AE+
Sbjct: 698 VGNILFSVETQTTEERTQLYHAEI 721


>gi|50949446|emb|CAH10599.1| hypothetical protein [Homo sapiens]
          Length = 785

 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 298/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 67  STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 126

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 127 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 185

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 186 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 245

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 246 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 305

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 306 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 365

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 366 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 421

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 422 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 472

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 473 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 492

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 493 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 548

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 549 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 608

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 609 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 647


>gi|329663548|ref|NP_001192789.1| tetratricopeptide repeat protein 13 precursor [Bos taurus]
 gi|296472256|tpg|DAA14371.1| TPA: tetratricopeptide repeat domain 13 isoform 1 [Bos taurus]
          Length = 858

 Score =  229 bits (585), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 170/636 (26%), Positives = 297/636 (46%), Gaps = 82/636 (12%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 140 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 199

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 200 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 258

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 259 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 318

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G   +A+K+    L +
Sbjct: 319 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQL 378

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 379 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 438

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 439 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 494

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 495 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 545

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 546 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 565

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAK-- 909
           +AVKWR+I++P  PV+W++++ ++  + GF +H  +I GQ   +RY   + + L   K  
Sbjct: 566 IAVKWRRIADPDQPVLWLDQMPAQSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDR 625

Query: 910 --------------TVMKDKKYVHNKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQ 952
                          V +  + VH K +D++ + +       + F + T   S   +GK+
Sbjct: 626 ILVYHGANNPKGLLEVREALEKVH-KVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKE 684

Query: 953 LEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
            +G  IT+         F++ T  T  R   + AE+
Sbjct: 685 YDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 720


>gi|355746300|gb|EHH50925.1| hypothetical protein EGM_01832, partial [Macaca fascicularis]
          Length = 775

 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 298/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 57  STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 116

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 117 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 175

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 176 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 235

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 236 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 295

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 296 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 355

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 356 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 411

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 412 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 462

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 463 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 482

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 483 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 538

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 539 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 598

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 599 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 637


>gi|109020014|ref|XP_001107062.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 5 [Macaca
           mulatta]
          Length = 860

 Score =  229 bits (584), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 170/636 (26%), Positives = 297/636 (46%), Gaps = 82/636 (12%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 142 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 201

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 202 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 260

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 261 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 320

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 321 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 380

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 381 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 440

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 441 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 496

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 497 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 547

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 548 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 567

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAK-- 909
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L   K  
Sbjct: 568 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDR 627

Query: 910 --------------TVMKDKKYVHNKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQ 952
                          V +  + VH K +D++ + +       + F + T   S   +GK+
Sbjct: 628 ILVYHGANNPKGLLEVREALEKVH-KVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKE 686

Query: 953 LEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
            +G  IT+         F++ T  T  R   + AE+
Sbjct: 687 YDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 722


>gi|170784867|ref|NP_078801.3| tetratricopeptide repeat protein 13 isoform a [Homo sapiens]
 gi|212276494|sp|Q8NBP0.3|TTC13_HUMAN RecName: Full=Tetratricopeptide repeat protein 13; Short=TPR repeat
           protein 13
          Length = 860

 Score =  229 bits (584), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 178/682 (26%), Positives = 313/682 (45%), Gaps = 86/682 (12%)

Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
           SD +   S+   S LS   + +   +      K+F       + + S +  L+     + 
Sbjct: 100 SDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFA----TDNDSTNEELAIAYVLIG 155

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
            G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A+ + +  I   P  
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED   
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQ 274

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E
Sbjct: 275 SLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFE 334

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   
Sbjct: 335 AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLS 394

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDG 687
           + A+G++ E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID 
Sbjct: 395 HVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDV 454

Query: 688 DIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSI 746
           D+   FK++W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +
Sbjct: 455 DLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRL 510

Query: 747 GKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRK 806
           G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K
Sbjct: 511 GSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----K 556

Query: 807 DRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDP 866
            R+                                   M W+D++ +AVKWR+I++P  P
Sbjct: 557 TRL-----------------------------------MQWRDMFDIAVKWRRIADPDQP 581

Query: 867 VVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAK---------------- 909
           V+W++++ +   + GF +H  +I GQ   +RY   + + L   K                
Sbjct: 582 VLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLL 641

Query: 910 TVMKDKKYVHNKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGES 966
            V +  + VH K +D++ + +       + F + T   S   +GK+ +G  IT+      
Sbjct: 642 EVREALEKVH-KVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVG 700

Query: 967 GYDFAIRTPCTPSRWDEFDAEM 988
              F++ T  T  R   + AE+
Sbjct: 701 NILFSVETQTTEERTQLYHAEI 722


>gi|114573138|ref|XP_001149480.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 4 [Pan
           troglodytes]
 gi|410218578|gb|JAA06508.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
 gi|410264780|gb|JAA20356.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
 gi|410306726|gb|JAA31963.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
          Length = 860

 Score =  229 bits (584), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 178/682 (26%), Positives = 313/682 (45%), Gaps = 86/682 (12%)

Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
           SD +   S+   S LS   + +   +      K+F       + + S +  L+     + 
Sbjct: 100 SDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFA----TDNDSTNEELAIAYVLIG 155

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
            G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A+ + +  I   P  
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED   
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQ 274

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E
Sbjct: 275 SLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFE 334

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   
Sbjct: 335 AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLS 394

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDG 687
           + A+G++ E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID 
Sbjct: 395 HVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDV 454

Query: 688 DIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSI 746
           D+   FK++W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +
Sbjct: 455 DLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRL 510

Query: 747 GKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRK 806
           G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K
Sbjct: 511 GSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----K 556

Query: 807 DRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDP 866
            R+                                   M W+D++ +AVKWR+I++P  P
Sbjct: 557 TRL-----------------------------------MQWRDMFDIAVKWRRIADPDQP 581

Query: 867 VVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAK---------------- 909
           V+W++++ +   + GF +H  +I GQ   +RY   + + L   K                
Sbjct: 582 VLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLL 641

Query: 910 TVMKDKKYVHNKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGES 966
            V +  + VH K +D++ + +       + F + T   S   +GK+ +G  IT+      
Sbjct: 642 EVREALEKVH-KVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVG 700

Query: 967 GYDFAIRTPCTPSRWDEFDAEM 988
              F++ T  T  R   + AE+
Sbjct: 701 NILFSVETQTTEERTQLYHAEI 722


>gi|332266747|ref|XP_003282359.1| PREDICTED: tetratricopeptide repeat protein 13, partial [Nomascus
           leucogenys]
          Length = 738

 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 298/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 20  STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 79

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 80  LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 138

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 139 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 198

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 199 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 258

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 259 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 318

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 319 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 374

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 375 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 425

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 426 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 445

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 446 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 501

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 502 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 561

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 562 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 600


>gi|301763435|ref|XP_002917148.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
           13-like [Ailuropoda melanoleuca]
          Length = 868

 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 171/639 (26%), Positives = 299/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 150 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 209

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 210 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 268

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 269 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 328

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 329 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 388

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 389 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 448

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 449 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 504

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 505 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 555

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 556 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 575

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 576 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 631

Query: 912 MKDKKYVHNKADDIIDL------------SEDVVG----------EDFWLATWCNSTAFE 949
           +KD+  V++ A++   L             ED++           + F + T   S   +
Sbjct: 632 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 691

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 692 GKEYDGFTITITGDKVGNILFSVETQTTEERTQFYHAEI 730


>gi|426334205|ref|XP_004028650.1| PREDICTED: tetratricopeptide repeat protein 13 [Gorilla gorilla
           gorilla]
          Length = 782

 Score =  229 bits (583), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 298/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 64  STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 123

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 124 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 182

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 183 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 242

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 243 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 302

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 303 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 362

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 363 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 418

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 419 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 469

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 470 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 489

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 490 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 545

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 546 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 605

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 606 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 644


>gi|426255520|ref|XP_004021396.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Ovis
           aries]
          Length = 859

 Score =  229 bits (583), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 170/636 (26%), Positives = 296/636 (46%), Gaps = 82/636 (12%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 141 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 200

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 201 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 259

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 260 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 319

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G   +A+K+    L +
Sbjct: 320 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQL 379

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 380 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 439

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 440 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 495

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 496 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 546

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 547 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 566

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAK-- 909
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L   K  
Sbjct: 567 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDR 626

Query: 910 --------------TVMKDKKYVHNKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQ 952
                          V +  + VH K +D++ + +       + F + T   S   +GK+
Sbjct: 627 ILVYHGANNPKGLLEVREALEKVH-KVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKE 685

Query: 953 LEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
            +G  IT+         F++ T  T  R   + AE+
Sbjct: 686 YDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 721


>gi|281350820|gb|EFB26404.1| hypothetical protein PANDA_005322 [Ailuropoda melanoleuca]
          Length = 770

 Score =  228 bits (582), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 298/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 52  STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 111

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 112 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 170

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 171 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 230

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 231 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 290

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 291 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 350

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 351 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 406

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 407 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 457

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 458 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 477

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 478 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 533

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 534 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 593

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 594 GKEYDGFTITITGDKVGNILFSVETQTTEERTQFYHAEI 632


>gi|291402198|ref|XP_002717429.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 1
           [Oryctolagus cuniculus]
          Length = 865

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 168/639 (26%), Positives = 298/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 147 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 206

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 207 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 265

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L++    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 266 ISEDYATAHEDFQQSLELNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 325

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 326 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 385

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 386 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 445

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 446 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 501

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 502 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 552

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 553 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 572

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 573 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 628

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 629 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 688

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 689 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 727


>gi|351708630|gb|EHB11549.1| Tetratricopeptide repeat protein 13 [Heterocephalus glaber]
          Length = 845

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 165/639 (25%), Positives = 300/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 127 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 186

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG ++F
Sbjct: 187 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLHF 245

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L++   +A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 246 ISEDYATAHEDFQQSLELNRNQPTAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 305

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G   +A+K+    L +
Sbjct: 306 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLPEALKNFKRCLQL 365

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 366 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 425

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    +++D D+   FK++W K L    + +    QP L+  +K   +  Q+F   
Sbjct: 426 AHLDTTLTEYNVDVDLPGSFKDHWAKNL--PFLIDDYEEQPGLQPHIK--DVLHQNFESY 481

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 482 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 532

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 533 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 552

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR++++P  PV+W++++ ++  + GF +H  +I GQ   +RY   + + L      
Sbjct: 553 IAVKWRRVADPDQPVLWLDQMPAQSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 608

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 609 IKDRILVYHGTNNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 668

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 669 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 707


>gi|395849727|ref|XP_003797467.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Otolemur
           garnettii]
          Length = 863

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 297/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 145 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 204

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 205 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 263

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 264 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 323

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 324 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 383

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 384 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 443

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 444 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 499

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K     L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 500 KPDVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 550

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 551 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 570

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 571 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 626

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 627 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 686

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 687 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 725


>gi|194042608|ref|XP_001926697.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Sus
           scrofa]
          Length = 858

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 298/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 140 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDVKNAELA 199

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 200 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 258

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 259 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 318

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 319 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGVMLYHHGSLQEALKNFKRCLQL 378

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 379 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 438

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 439 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 494

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 495 KPEVQELVCVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 545

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 546 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 565

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 566 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 621

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 622 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 681

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 682 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 720


>gi|156363467|ref|XP_001626065.1| predicted protein [Nematostella vectensis]
 gi|156212927|gb|EDO33965.1| predicted protein [Nematostella vectensis]
          Length = 730

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 173/639 (27%), Positives = 295/639 (46%), Gaps = 80/639 (12%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-----FQRELEAAI 435
           V F  +  I+ +  G    AIS F +I+KE P    A +GRGTA        +   +AAI
Sbjct: 6   VSFITAHAISLLGCGDIDDAISYFTKIIKEHPKVTSAFLGRGTAYVKKGIQIKENSDAAI 65

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           SDF+  I  +P   E W RR +  + +G   EAI+D+S AL  +P SA++    G ++F 
Sbjct: 66  SDFSTVISHSPKNPEGWIRRAEVLSPIGRIPEAIKDISVALSLQP-SAELYLISGTLHFM 124

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
            +D+  A ++L   ++ +    +A  YLGL+L   G  ++A   + KA+Q + N  E   
Sbjct: 125 SEDYVTATKNLEKSLEYNPSQATATLYLGLSLYHRGLIQQAIPLYKKALQANTNTAEVHR 184

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
            L   Y++L ++  A E     L ++ R ++ +HLRG+L +  G+   A+ D  +    D
Sbjct: 185 SLGHAYRELGDASAAYEHFTAALLLEPRSAETFHLRGMLQYMNGKPALALNDFKACQSFD 244

Query: 616 PSNIECLYLRASCYHAIGEYREAIK-DYDAALDLELDSMEKFVLQCLAFYQKEIALYTAS 674
           P N  CLY++A CY  +G + E +K      L L         +   A + KE + Y  S
Sbjct: 245 PQNTACLYMKAVCYATLGNFYETVKMSTKVRLHLLYHGGIMNPIAVKAQFLKEYSRYLHS 304

Query: 675 KINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGK-LRRQDFSVT 733
            +++    F  D  +D   +++W K L P ++      QP ++ S+++ + L  +++S T
Sbjct: 305 HLDTPLTSFTPDEGLDGNLRDHWVKSL-PFSILNYT-EQPGIQPSIREVESLPFEEYS-T 361

Query: 734 KQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSN 793
             KT +L  +  +G  +QY   GFL + R HR  GLA +++AQ   + W+S+        
Sbjct: 362 DAKT-ILCKSQLLGPLVQYHTDGFLPSTRHHRAMGLAILDVAQAAQRHWKSV-------- 412

Query: 794 RSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTL 853
           RSS  + K AR                                        +SW+ ++ +
Sbjct: 413 RSSKASDKSAR----------------------------------------LSWRAMFDV 432

Query: 854 AVKWRQISEPCDPVVWVNKLSEE-FNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVM 912
           AVKWR++ +P   V+W++K+ ++   +GF  H  ++ GQ + VRY   + +     K ++
Sbjct: 433 AVKWRRLVDPDQAVMWLDKMPQKSVRAGFNVHMTLVRGQMRNVRYSDYFEKIFQFTKKML 492

Query: 913 -----------KDKKYVHNKADDIIDLSEDVVGED-------FWLATWCNSTAFEGK-QL 953
                      KD K    K+    DL   +  ++         L+T   S    GK  L
Sbjct: 493 LHFYKTEEFSTKDFKRRIEKSRTCEDLISALKVQNPTNPQPGLMLSTHVTSLLTAGKSNL 552

Query: 954 EGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAW 992
           +G  + L +       F++ TP TP+R   + +E+   W
Sbjct: 553 DGVILMLSEGSGKNLVFSMDTPTTPTRTANYHSELEFLW 591



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 72/161 (44%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           ++ S   S +  L  G        Y +A    ++ L+ +P    A +  G +   +  ++
Sbjct: 104 VALSLQPSAELYLISGTLHFMSEDYVTATKNLEKSLEYNPSQATATLYLGLSLYHRGLIQ 163

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI  + +A+Q+N +  E  +  G A   LG++  A +  + AL  EP SA+  H RG++
Sbjct: 164 QAIPLYKKALQANTNTAEVHRSLGHAYRELGDASAAYEHFTAALLLEPRSAETFHLRGML 223

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
            +       A+ D  AC   D +N +      +  +++G +
Sbjct: 224 QYMNGKPALALNDFKACQSFDPQNTACLYMKAVCYATLGNF 264


>gi|440909805|gb|ELR59678.1| Tetratricopeptide repeat protein 13, partial [Bos grunniens mutus]
          Length = 770

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 297/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 52  STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 111

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 112 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 170

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 171 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 230

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G   +A+K+    L +
Sbjct: 231 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQL 290

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 291 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 350

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 351 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 406

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 407 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 457

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 458 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 477

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 478 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 533

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 534 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 593

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 594 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 632


>gi|338717240|ref|XP_001916733.2| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 13
           [Equus caballus]
          Length = 854

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 168/639 (26%), Positives = 298/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  + A
Sbjct: 136 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNADLA 195

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 196 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 254

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 255 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 314

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 315 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 374

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 375 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 434

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 435 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 490

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 491 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 541

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 542 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 561

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 562 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 617

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 618 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 677

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 678 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 716


>gi|73952538|ref|XP_546094.2| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Canis
           lupus familiaris]
          Length = 859

 Score =  228 bits (580), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 168/639 (26%), Positives = 298/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 141 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 200

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 201 LFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 259

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 260 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 319

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 320 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 379

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 380 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 439

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    +++D D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 440 AHLDTPLTEYNVDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 495

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 496 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 546

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 547 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 566

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 567 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 622

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S   +
Sbjct: 623 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQ 682

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 683 GKEYDGFTITITGDKIGNILFSVETQTTEERTQFYHAEI 721


>gi|397508273|ref|XP_003824586.1| PREDICTED: tetratricopeptide repeat protein 13 [Pan paniscus]
          Length = 834

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 177/682 (25%), Positives = 313/682 (45%), Gaps = 86/682 (12%)

Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
           SD +   S+   S LS   + +   +      K+F       + + S +  L+     + 
Sbjct: 89  SDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFA----TDNDSTNEELAIAYVLIG 144

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
            G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A+ + +  I   P  
Sbjct: 145 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 204

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED   
Sbjct: 205 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQ 263

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E
Sbjct: 264 SLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFE 323

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   
Sbjct: 324 AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLS 383

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDG 687
           + A+G++ E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID 
Sbjct: 384 HVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDV 443

Query: 688 DIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSI 746
           D+   FK++W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +
Sbjct: 444 DLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRL 499

Query: 747 GKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRK 806
           G  +QY+ PGFL N+R HR  GLA++E+ Q V + W         +N     NG     K
Sbjct: 500 GSLMQYETPGFLPNKRIHRAMGLASLEVMQAVQRTW---------TNSKVRMNG-----K 545

Query: 807 DRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDP 866
            R+                                   M W+D++ +AVKWR+I++P  P
Sbjct: 546 TRL-----------------------------------MQWRDMFDIAVKWRRIADPDQP 570

Query: 867 VVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAK---------------- 909
           V+W++++ +   + GF +H  +I GQ   +RY   + + L   K                
Sbjct: 571 VLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLL 630

Query: 910 TVMKDKKYVHNKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGES 966
            V +  + VH K +D++ + +       + F + T   S   +GK+ +G  IT+      
Sbjct: 631 EVREALEKVH-KVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVG 689

Query: 967 GYDFAIRTPCTPSRWDEFDAEM 988
              F++ T  T  R   + AE+
Sbjct: 690 NILFSVETQTTEERTQLYHAEI 711


>gi|22761440|dbj|BAC11586.1| unnamed protein product [Homo sapiens]
          Length = 860

 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 176/685 (25%), Positives = 314/685 (45%), Gaps = 92/685 (13%)

Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
           SD +   S+   S LS   + +   +      K+F       + + S +  L+     + 
Sbjct: 100 SDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFA----TDNDSTNEELAIAYVLIG 155

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
            G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A+ + +  I   P  
Sbjct: 156 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 215

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED   
Sbjct: 216 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQ 274

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E
Sbjct: 275 SLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFE 334

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   
Sbjct: 335 AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLS 394

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDG 687
           + A+G++ E IK     +  +    +K   + L   Y +E + +  + +++    ++ID 
Sbjct: 395 HVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRHLHAHLDTPLTEYNIDV 454

Query: 688 DIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSI 746
           D+   FK++W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +
Sbjct: 455 DLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRL 510

Query: 747 GKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRK 806
           G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K
Sbjct: 511 GSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----K 556

Query: 807 DRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDP 866
            R+                                   M W+D++ +AVKWR+I++P  P
Sbjct: 557 TRL-----------------------------------MQWRDMFDIAVKWRRIADPDQP 581

Query: 867 VVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH------ 919
           V+W++++ +   + GF +H  +I GQ   +RY   + + L      +KD+  V+      
Sbjct: 582 VLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNP 637

Query: 920 -------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKM 963
                        +K +D++ + +       + F + T   S   +GK+ +G  IT+   
Sbjct: 638 KGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGD 697

Query: 964 GESGYDFAIRTPCTPSRWDEFDAEM 988
                 F++ T  T  R   + AE+
Sbjct: 698 KVGNILFSVETQTTEERTQLYHAEI 722


>gi|417412887|gb|JAA52802.1| Putative o-linked n-acetylglucosamine transferase ogt, partial
           [Desmodus rotundus]
          Length = 842

 Score =  226 bits (577), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 168/636 (26%), Positives = 296/636 (46%), Gaps = 82/636 (12%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 124 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 183

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG ++F
Sbjct: 184 LFELSRVISLEPDRPEVFEQRAEILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHF 242

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L++    A  Y GL     G  K+A E+   A++   +F++A+
Sbjct: 243 ISEDYATAHEDFQQSLELNRNQPIAMLYKGLTFFHRGLLKEAIESFKDALKQKVDFIDAY 302

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 303 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 362

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 363 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 422

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 423 AHLDTPLTEYNIDVDLPGSFKDHWAKSL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 478

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 479 KPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 529

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 530 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 549

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAK-- 909
           +A KWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L   K  
Sbjct: 550 IAAKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDR 609

Query: 910 --------------TVMKDKKYVHNKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQ 952
                          V +  + VH K +D++ + +       + F + T   S   +GK+
Sbjct: 610 ILIYHGANNPKGLLEVREALEKVH-KVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKE 668

Query: 953 LEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
            +G  IT+         F++ T  T  R   + AE+
Sbjct: 669 YDGFTITITGDKIGNILFSVETQTTEERTQLYHAEI 704


>gi|344278513|ref|XP_003411038.1| PREDICTED: tetratricopeptide repeat protein 13-like [Loxodonta
           africana]
          Length = 869

 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 168/639 (26%), Positives = 297/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 151 STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 210

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  +   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 211 LFELSRVVTLEPDRPEVFEQRAEILSPLGRINEAVSDLTKAIQLQP-SARLYRHRGTLYF 269

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 270 ISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAY 329

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 330 KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 389

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 390 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 449

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 450 AHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESY 505

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 506 KLEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------T 556

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 557 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 576

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 577 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 632

Query: 912 MKDKKYVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFE 949
           +KD+  V+                   +K +D++ + +       + F + T   S    
Sbjct: 633 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDP 692

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 693 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 731


>gi|194578961|ref|NP_001124099.1| tetratricopeptide repeat protein 13 precursor [Danio rerio]
 gi|190338937|gb|AAI63293.1| Zgc:194598 [Danio rerio]
          Length = 826

 Score =  226 bits (575), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 167/634 (26%), Positives = 296/634 (46%), Gaps = 88/634 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFT 439
           L+ G   +  G Y  AI  F  +L+ DP    A+ GRG A   ++ Q  +  + A+ + +
Sbjct: 113 LAIGYVLIGNGLYDEAIKHFSLLLQGDPELVSAIYGRGIAYGKKSLQDIKNADLALYELS 172

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
             I   P+  E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+
Sbjct: 173 RVIALEPNRPEVYEQRAEILSPLGRISEALLDLTKAIQLQP-SARLYRHRGTLLFISEDY 231

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
            AA+ED    ++L K    A  Y GL     G  K+A E   +A++L  +F++A+  L Q
Sbjct: 232 MAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIEVFKEALKLKSDFIDAYKSLGQ 291

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            Y++L + E A+E  Q+ L +D+   ++  LRG++L+  G  ++AI +    L ++P N 
Sbjct: 292 AYRELGDIENAMESFQKALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNFKRCLQLEPYNE 351

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINS 678
            C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  S ++ 
Sbjct: 352 VCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLLGQKASSEYLKVKYLREYSRYLHSHLDV 411

Query: 679 EFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDF-SVTKQKT 737
               +++D D+   FK +W K L    + E    QP L+  +K   +  Q+F S + +  
Sbjct: 412 PVAEYNVDQDLPGNFKNHWAKNL--PFLIEDYEEQPGLQPHIK--DVLPQNFDSYSAEVQ 467

Query: 738 ALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSS 797
            L+  AD +G  +QYD  GFL N R HR  GLA IE+ Q + + W         SN    
Sbjct: 468 KLICTADHLGALMQYDTSGFLPNLRIHRAMGLATIEVMQAMQRTW---------SNSKVR 518

Query: 798 KNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKW 857
            NGK                                          ++ W+D++ +AVKW
Sbjct: 519 VNGKTR----------------------------------------QLQWRDMFDIAVKW 538

Query: 858 RQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKK 916
           R+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   ++  L    + +KD+ 
Sbjct: 539 RRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQIINIRYLEYFSSIL----SFVKDRI 594

Query: 917 YVH-------------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLE 954
            V+                   NK +D++ + +       + F + +   S    GK+ +
Sbjct: 595 LVYHGAYNPRGLQEVKQALENVNKVEDLLPIMKQFNSKTRDGFTVNSKVPSLKDPGKEYD 654

Query: 955 GTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           G  IT+         F++ T  T  R  ++ +E+
Sbjct: 655 GFTITITGDRVGNMLFSVETQTTDERTQQYQSEI 688


>gi|449278069|gb|EMC86036.1| Tetratricopeptide repeat protein 13, partial [Columba livia]
          Length = 773

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 169/634 (26%), Positives = 294/634 (46%), Gaps = 88/634 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFT 439
           L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A+ + +
Sbjct: 57  LAIAYVLIGNGLYDEAIRHFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELALFELS 116

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
             I   P   E +++R +  + LG   EA+ DLSKA++ +P SA +   RG + F  +D+
Sbjct: 117 RVISLEPDHPEVFEQRAEILSPLGRISEALSDLSKAIQLQP-SARLYRHRGTLYFISEDY 175

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q
Sbjct: 176 ATAHEDFQHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQ 235

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            Y++L N + A E  Q+ L +++   +   L+G++L+  G   +A+K+    L ++P N 
Sbjct: 236 AYRELGNFDAATENFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNFKRCLQLEPYNE 295

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINS 678
            C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  + +++
Sbjct: 296 VCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDT 355

Query: 679 EFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA 738
               ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   K    
Sbjct: 356 PLTEYNIDVDLPGNFKDHWAKNL--PFLIENYEEQPGLQPHIK--DVLFQNFESYKPDVQ 411

Query: 739 -LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSS 797
            L+ VAD +G  +QY+ PGFL NRR HR  GLA +E+ Q V + W         +N    
Sbjct: 412 ELICVADHLGSMMQYETPGFLPNRRIHRAMGLATLEVMQAVQRTW---------ANSKVR 462

Query: 798 KNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKW 857
            NG     K R+                                   M W+D++ +AVKW
Sbjct: 463 MNG-----KTRL-----------------------------------MQWRDMFDIAVKW 482

Query: 858 RQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKK 916
           R+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      +KD+ 
Sbjct: 483 RRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILQ----FIKDRI 538

Query: 917 YVHNKADDIIDL------------SEDVVG----------EDFWLATWCNSTAFEGKQLE 954
            V++ A++   L             ED++           + F + T   S   +GK+ +
Sbjct: 539 LVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNSKTRDGFTVNTKVPSLKDQGKEYD 598

Query: 955 GTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           G  IT+         F++ T  T  R   + AE+
Sbjct: 599 GFTITITGDKVGNVLFSVETQTTEERTQLYHAEI 632



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 2/178 (1%)

Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
            ++ +SK+  +    RL   RG        YA+A   F   L+ +   P A++ +G    
Sbjct: 145 ALSDLSKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQHSLELNKNQPIAMLYKGLTFF 204

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
            +  L+ AI  F EA++      +A+K  GQA   LG    A ++  KAL    N    L
Sbjct: 205 HRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFDAATENFQKALLLNQNHVQTL 264

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
             +G++ +     + A+++   C++L+  N+      GL+  ++G++ +  +A  K +
Sbjct: 265 QLKGMMLYHHGSLDEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 322


>gi|345319826|ref|XP_001521471.2| PREDICTED: tetratricopeptide repeat protein 13 [Ornithorhynchus
           anatinus]
          Length = 817

 Score =  224 bits (572), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 175/685 (25%), Positives = 311/685 (45%), Gaps = 92/685 (13%)

Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
           SD +S  S    S LS   + +   +      K+F       + +++++  L+     + 
Sbjct: 57  SDCESRGSPPCESLLSLNTEKILSQAKTLAEQKRFPFA----TDNVNMNEELAIAYVLIG 112

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
            G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A+ + +  +   P  
Sbjct: 113 SGLYDEAIRHFSSMLQEEPELVSAIYGRGIAYGKKGLHDVKNAELALFELSRVVALEPDR 172

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +  ++R +  + LG   EA+ DL+KA++ +P SA +   RG ++F  +D+ AA ED   
Sbjct: 173 PDVLEQRAEILSPLGRVSEALSDLTKAIQLQP-SARLYRHRGTLHFISEDYAAAHEDFQQ 231

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + L+     A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E
Sbjct: 232 SLDLNPNQPIAMLYKGLTFFHRGLLKEAVESFKEALKQKADFIDAYKSLGQAYRELGNFE 291

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A E  Q+ L ++    +   LRG++L+  G  ++A+K     L ++P N  C ++R   
Sbjct: 292 AATESFQRALLLNHNHVQTLQLRGVMLYHHGSLQEALKSFKRCLQLEPYNEVCQHMRGLS 351

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDG 687
           + A+G++ E IK     +  +    +K   + L   Y +E + Y  + +++    + +D 
Sbjct: 352 HVALGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTLLTEYSVDE 411

Query: 688 DIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSI 746
           D+   FK++W K L    + +    QP L+  +K   +  Q+F   K +   L+  AD +
Sbjct: 412 DLPGGFKDHWAKNL--PFLIDDYEEQPGLQPHIK--DVLPQNFDSYKLEVQELICAADRL 467

Query: 747 GKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRK 806
           G  +QY+ PGFL NRR HR  GLAA+E+ Q V + W                        
Sbjct: 468 GSLMQYETPGFLPNRRIHRAMGLAALEVMQAVRRTW------------------------ 503

Query: 807 DRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDP 866
                             ++S   ++G T         M W+D++ +AVKWR+I++P  P
Sbjct: 504 ------------------ANSKVRTHGKTR-------LMQWRDMFDIAVKWRRIADPDQP 538

Query: 867 VVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKAD-- 923
           V+W++++S    + GF +H  +I GQ   +RY   + R L      +KD+  V++ A+  
Sbjct: 539 VLWLDQMSARSLSRGFNNHINLIRGQVINMRYLEYFERILH----FIKDRILVYHGANNP 594

Query: 924 ----------DIIDLSEDVVG----------EDFWLATWCNSTAFEGKQLEGTRITLVKM 963
                     D +   ED++           + F + T   S    GK+ +G  IT+   
Sbjct: 595 KGLLEVREALDKVHRVEDLLPVMKQFNSKTRDGFTVNTKVPSLKDPGKEYDGFTITITGD 654

Query: 964 GESGYDFAIRTPCTPSRWDEFDAEM 988
                 F++ T  T  R   + AE+
Sbjct: 655 KVGNILFSVETQTTEERTQLYHAEI 679


>gi|395728894|ref|XP_002809357.2| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein 13
           [Pongo abelii]
          Length = 807

 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 173/684 (25%), Positives = 308/684 (45%), Gaps = 101/684 (14%)

Query: 334 SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVN 393
           SD +   S+   S LS   + +   +      K+F       + + S +  L+     + 
Sbjct: 58  SDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFA----TDNDSTNEELAIAYVLIG 113

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSA 448
            G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A+ + +  I   P  
Sbjct: 114 SGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDR 173

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED   
Sbjct: 174 PEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQ 232

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E
Sbjct: 233 SLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFE 292

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   
Sbjct: 293 AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLS 352

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDG 687
           + A+G++ E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID 
Sbjct: 353 HVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDV 412

Query: 688 DIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIG 747
           D+   FK++W K L    + E    QP L+  +K             +   L+  AD +G
Sbjct: 413 DLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK------------PEVQELICXADRLG 458

Query: 748 KKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKD 807
             +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K 
Sbjct: 459 SLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KT 504

Query: 808 RINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPV 867
           R+                                   M W+D++ +AVKWR+I++P  PV
Sbjct: 505 RL-----------------------------------MQWRDMFDIAVKWRRIADPDQPV 529

Query: 868 VWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH------- 919
           +W++++ +   + GF +H  +I GQ   +RY   + + L      +KD+  V+       
Sbjct: 530 LWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPK 585

Query: 920 ------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMG 964
                       +K +D++ + +       + F + T   S   +GK+ +G  IT+    
Sbjct: 586 GLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDK 645

Query: 965 ESGYDFAIRTPCTPSRWDEFDAEM 988
                F++ T  T  R   + AE+
Sbjct: 646 VGNILFSVETQTTEERTQLYHAEI 669


>gi|334322164|ref|XP_003340195.1| PREDICTED: LOW QUALITY PROTEIN: tetratricopeptide repeat protein
           13-like [Monodelphis domestica]
          Length = 852

 Score =  222 bits (566), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 167/622 (26%), Positives = 293/622 (47%), Gaps = 88/622 (14%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFTEAIQSNPSAGEA 451
           + +A+  F  ++ E+P    A+ GRG A   +  Q  +  E A+ + +  I   P   E 
Sbjct: 151 FINALLCFCFLVXEEPELVSAIYGRGIAYGKKGLQDIKNAELALFELSRVITLEPDRPEV 210

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +++R +  + LG   EA+ DL+KA++ +P SA +   RG ++F  +D+  A ED    ++
Sbjct: 211 FEQRAEILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDFQQSLE 269

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A 
Sbjct: 270 LNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAAT 329

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A
Sbjct: 330 ESFQRALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVA 389

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDID 690
           +G + E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+ 
Sbjct: 390 MGHFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLP 449

Query: 691 PLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKK 749
             FK++W K L    + E    QP L+  +K   L  Q+F   K     L+ VAD +G  
Sbjct: 450 GSFKDHWAKNL--PFLIEDYEEQPGLQPHIKDVLL--QNFESYKPDVQELICVADRLGSL 505

Query: 750 IQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRI 809
           +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+
Sbjct: 506 MQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------ANSKVRMNG-----KTRL 551

Query: 810 NIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVW 869
                                              M W+D++ +AVKWR+I++P  PV+W
Sbjct: 552 -----------------------------------MQWRDMFDIAVKWRRIADPDQPVLW 576

Query: 870 VNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL 928
           ++++ +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A++   L
Sbjct: 577 LDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGL 632

Query: 929 ------------SEDVVG----------EDFWLATWCNSTAFEGKQLEGTRITLVKMGES 966
                        ED++           + F + T   S   +GK+ +G  IT+      
Sbjct: 633 LEVREALEKVHKVEDLLPIMKQFNSKTRDGFTVNTKVPSLKDQGKEYDGFTITITGDKVG 692

Query: 967 GYDFAIRTPCTPSRWDEFDAEM 988
              F++ T  T  R   + AE+
Sbjct: 693 NILFSVETQTTEERTQLYHAEI 714


>gi|327262216|ref|XP_003215921.1| PREDICTED: tetratricopeptide repeat protein 13-like [Anolis
           carolinensis]
          Length = 823

 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 165/635 (25%), Positives = 292/635 (45%), Gaps = 80/635 (12%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E P    A+ GRG A   +     +  E A
Sbjct: 118 STNEELAIAYVLIGSGLYDEAIQQFSTMLQEQPELVSAIYGRGIAYGRKGLHDIKNAELA 177

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG  VEA+ DLSKA++ +P SA +   RG + F
Sbjct: 178 LFELSRVISLAPDHPEVFEQRAEILSPLGRIVEALADLSKAIQLKP-SARLYRHRGTLYF 236

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L++    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 237 ISEDYATAQEDFQNSLELNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFVDAY 296

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N E A E  Q+ L +++   +   L G++L+  G   +A+K+    L +
Sbjct: 297 KSLGQAYRELGNFEAATENFQKALMLNQNHVQTIQLGGMMLYHHGSPDEALKNFKRCLQL 356

Query: 615 DPSNIECLYLRASCYHAIGEYREAIK-DYDAALDLELDSMEKFVLQCLAFYQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK    A L+  L   +         Y +E + Y  
Sbjct: 357 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKAMLNDPLPGQKASTEYLKVKYLREYSRYLH 416

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ID D+   FK++W K L    + E    QP L+  +K   L++ + +  
Sbjct: 417 AHLDTPLTEYNIDMDLPGKFKDHWAKNL--PFLIEDYEEQPGLQPHIKDVVLQKFE-NYK 473

Query: 734 KQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSN 793
            +   ++ +AD +G   QY+ PGFL N+R HR  GLA +E+ Q + + W          N
Sbjct: 474 PEMQEMICIADHLGSLTQYEMPGFLPNKRIHRAMGLAVLEVMQALQRTW---------VN 524

Query: 794 RSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTL 853
                NG     K R+                                   M W+D++ +
Sbjct: 525 SKVRMNG-----KTRL-----------------------------------MQWRDMFDI 544

Query: 854 AVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAK--- 909
           AVKWR+I++P  PV+W++++ ++  N GF +H  +I GQ   +RY   + + L   K   
Sbjct: 545 AVKWRRIADPDQPVLWLDQMPAQSRNRGFNNHINLIRGQVINMRYIEYFEKMLHFVKERI 604

Query: 910 -------------TVMKDKKYVHNKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQL 953
                         V +  + VH K +D++ + + +     + F + T   S    GK+ 
Sbjct: 605 LVYHSANSHTELLEVREALEQVH-KVEDLLPIMKQLNSKTRDGFTVNTKVPSLKDPGKEY 663

Query: 954 EGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           +G  IT+         F++ T  T  R  ++  E+
Sbjct: 664 DGFTITITGDKIGNILFSVETQTTEERTQQYHVEI 698


>gi|118088252|ref|XP_419586.2| PREDICTED: tetratricopeptide repeat protein 13 [Gallus gallus]
          Length = 847

 Score =  222 bits (565), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 166/627 (26%), Positives = 292/627 (46%), Gaps = 88/627 (14%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
           +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A+ + +  I   P
Sbjct: 138 IGNGLYDEAIRQFSTMLQEEPELVSAIYGRGIAYGKKGLHDVKNAELALFELSRVISLEP 197

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED 
Sbjct: 198 DHPEVFEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 256

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N
Sbjct: 257 QHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGN 316

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + A E  Q+ L +++   +   L+G++L+  G   +A+K+    L ++P N  C Y++ 
Sbjct: 317 FDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNFKRCLQLEPYNEVCQYMKG 376

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDI 685
             + A+G++ E IK     +  +    +K   + L   Y +E + Y  + +++    ++I
Sbjct: 377 LSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNI 436

Query: 686 DGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDF-SVTKQKTALLLVAD 744
           D D+   FK++W K L    + E    QP L+  +K   +  Q+F S       L+ VAD
Sbjct: 437 DIDLPGNFKDHWAKNL--PFLIENYEEQPGLQPHIK--DVLFQNFESYRTDVQELICVAD 492

Query: 745 SIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRAR 804
            +G  +QY+ PGFL N+R HR  GLA +E+ Q V + W         +N     NG    
Sbjct: 493 HLGSMMQYETPGFLPNKRIHRAMGLATLEVMQAVQRTW---------ANSKVRMNG---- 539

Query: 805 RKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPC 864
            K R+                                   M W+D++ +AVKWR+I++P 
Sbjct: 540 -KTRL-----------------------------------MQWRDMFDIAVKWRRIADPD 563

Query: 865 DPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKAD 923
            PV+W++++ +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A+
Sbjct: 564 QPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGAN 619

Query: 924 DIIDLS------------EDVVG----------EDFWLATWCNSTAFEGKQLEGTRITLV 961
           +   L             ED++           + F + T   S   +GK+ +G  IT+ 
Sbjct: 620 NPKGLMEVREALEKVHKVEDLLPIMKQFNSKTRDGFTVNTKVPSLKDQGKEYDGFTITIT 679

Query: 962 KMGESGYDFAIRTPCTPSRWDEFDAEM 988
                   F++ T  T  R   + AE+
Sbjct: 680 GDKVGNILFSVETQTTEERTQLYHAEI 706


>gi|301609916|ref|XP_002934497.1| PREDICTED: tetratricopeptide repeat protein 13 [Xenopus (Silurana)
           tropicalis]
          Length = 839

 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 170/633 (26%), Positives = 296/633 (46%), Gaps = 87/633 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFT 439
           L+ G   +  G    AI  F  +L+E+P    A+ GRG A A +     +  E A+ + +
Sbjct: 127 LAIGYVLIGSGLQDEAIKHFSSMLQEEPDLVSAIYGRGIAYARKGLQDIKNAELALFELS 186

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
             I   P   E +++R +  + LG   EA+ DL++A++ +P SA +   RG ++F  +D+
Sbjct: 187 RVISLEPDHPEVFEQRAEILSPLGRISEALSDLTRAIQLQP-SARLYRHRGTLHFISEDY 245

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
            AA ED    + L++    A  Y GL     G  K+A ++  +A++   NF+EA+  L Q
Sbjct: 246 LAAQEDFQRSLGLNQNQPIAVLYKGLTFFHRGLLKEAIDSFKEALKQKSNFIEAYKSLGQ 305

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            Y++L N E A+E  Q+ L +++   +   LRG++L+  G  ++A+ +    L ++P N 
Sbjct: 306 AYRELGNFEAAMENFQKALMLNQNHVQTLQLRGMMLYHHGSLQEALTNFKRCLQLEPYNE 365

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINS 678
            C Y++   + ++G + E IK     +  +    +K   + L   Y +E + Y  + +++
Sbjct: 366 VCQYMKGLSHVSMGHFYEGIKAQTKVMLNDPLPGQKASQEYLKVKYLREYSRYLHAHLDT 425

Query: 679 EFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA 738
               ++ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   K +  
Sbjct: 426 PVTEYNIDADLPGNFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLPQNFESYKPEIQ 481

Query: 739 -LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSS 797
            L+ VADS+G  +QY+  GFL NRR HR  GLAA+EI Q + + W         +N    
Sbjct: 482 ELVCVADSLGSLMQYETYGFLPNRRIHRAMGLAALEIMQALHRTW---------TNSKVR 532

Query: 798 KNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKW 857
            NG     K R+                                   M W+D++ +AVKW
Sbjct: 533 ING-----KTRL-----------------------------------MQWRDMFDIAVKW 552

Query: 858 RQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKK 916
           R+IS+P  PV+W++++ ++    GF +H  +I GQ   +RY   +    D     +KD+ 
Sbjct: 553 RRISDPDQPVLWLDQMPAQSLIRGFNNHINLIRGQIINMRYLDYF----DTILGFIKDRI 608

Query: 917 YVHNKADDIIDL------------SEDVVG---------EDFWLATWCNSTAFEGKQLEG 955
            +++ A++   L             ED++          + F + T   S   E K+ +G
Sbjct: 609 LIYHSANNPRGLLEVKEALEKVKKVEDLLPIMKLNSKTRDGFTVNTKVPSLKDERKEYDG 668

Query: 956 TRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
             IT+         F++ T  T  R   + AE+
Sbjct: 669 FTITITGDKVGNILFSVETQTTEERTQLYHAEI 701


>gi|47222450|emb|CAG12970.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 788

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 174/658 (26%), Positives = 305/658 (46%), Gaps = 113/658 (17%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAA 434
           +V+  L+ G   +  G Y  AI  F  +L+ DP    A+ GRG A   ++ Q  +  + A
Sbjct: 52  NVNEELAIGYVLIGNGLYDEAIKHFSLLLQGDPELVSAIYGRGMAYGKKSLQDIKNADLA 111

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + +    I   P+  E +++R +  + LG   EA+ DLSKA++ +P SA +   RG + F
Sbjct: 112 LYELNRVITLEPNWPEVYEQRAEILSPLGRISEALADLSKAIQLQP-SARLYRHRGTLLF 170

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+ AA+ED    ++L K    A  Y GL     G  K+A E   +A++L  +F++A+
Sbjct: 171 ISEDYVAAMEDFQQSLELKKNQPIAMLYKGLTFFHRGLLKEAIETFKEALKLKSDFIDAY 230

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--- 611
             L Q Y++L + E A+E  Q+ L +D+   ++  LRG++L+  G  ++AI +       
Sbjct: 231 KSLGQAYRELGDFESAMESFQRALLLDQNHIQSLQLRGMMLYHHGSLQEAIGNFKVQVSP 290

Query: 612 ------LGIDPSNIECLYLRASCYHAIGEYREAIKD-----YDAALDLELDSMEKFVLQC 660
                 L ++P N  C Y++   + A+G++ E IK       +A L  +  S E   ++ 
Sbjct: 291 FTWLRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNAPLLGQKASSEYLKVK- 349

Query: 661 LAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSL 720
              Y +E + Y  S ++     +++D D+   FK +W K L    + E    QP L+  +
Sbjct: 350 ---YLREYSRYLHSHLDVPVAEYNVDQDLPGNFKNHWAKNL--PFLIEDYEEQPGLQPHI 404

Query: 721 KKGKLRRQDF-SVTKQKTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVS 779
           K   +  Q+F S + +   L+  AD +G  +QYD PGFL N R HR  GLA +E+ Q + 
Sbjct: 405 K--DVLPQNFDSYSSEVQKLICTADHLGALMQYDTPGFLPNARIHRAMGLATVEVMQAMH 462

Query: 780 KIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERS 839
           + W                                          S+S    +G T +  
Sbjct: 463 RTW------------------------------------------SNSKVRVHGKTRQ-- 478

Query: 840 SGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYF 898
                M W+D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY 
Sbjct: 479 -----MQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQIINIRYL 533

Query: 899 PNYARTLDVAKTVMKDKKYVH-------------------NKADDIIDLSEDV---VGED 936
             +   LD     +KD+  V+                   NK +D++ + +       + 
Sbjct: 534 AYFDSILD----FIKDRILVYHGAYNPRGLLEVRQALENVNKVEDLLPIMKQFNSKTRDG 589

Query: 937 FWLATWCNSTAFEGKQLEGTRIT------LVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           F + +   S    GK+ +G  IT      L+++G     F++ T  T  R  ++ +E+
Sbjct: 590 FTVNSKVPSMRDPGKEYDGFTITITGDRYLLRVG--NMLFSVETQTTEERTQQYQSEV 645


>gi|449497203|ref|XP_002190494.2| PREDICTED: tetratricopeptide repeat protein 13 [Taeniopygia
           guttata]
          Length = 839

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 167/639 (26%), Positives = 295/639 (46%), Gaps = 88/639 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 118 STNEELAIAYVLIGNGLYDEAIRHFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELA 177

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 178 LFELSRVISLEPDHPEVFEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLYF 236

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             +D+  A ED    ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+
Sbjct: 237 ISEDYATAHEDFQRSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAY 296

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L Q Y++L N + A E  Q+ L +++   +   L+G++L+  G   +A+K+    L +
Sbjct: 297 KSLGQAYRELGNFDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNFKRCLQL 356

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTA 673
           +P N  C Y++   + A+G++ E IK     +  +    +K   + L   Y +E + Y  
Sbjct: 357 EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLH 416

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
           + +++    ++ D D+   FK++W K L    + E    QP L+  +K   +  Q+F   
Sbjct: 417 AHLDTPLTEYNTDTDLPGNFKDHWAKNL--PFLIENYEEQPGLQPHIK--DVLFQNFESY 472

Query: 734 KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
           K     L+ VAD +G  +QY+ PGFL N+R HR  GLA +E+ Q V + W         +
Sbjct: 473 KPDVQELICVADHLGSMMQYETPGFLPNKRIHRAMGLATLEVMQAVQRTW---------T 523

Query: 793 NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
           N     NG     K R+                                   M W+D++ 
Sbjct: 524 NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 543

Query: 853 LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTV 911
           +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      
Sbjct: 544 IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----F 599

Query: 912 MKDKKYVHNKADDIIDL------------SEDVVG----------EDFWLATWCNSTAFE 949
           +KD+  V++ A++   L             ED++           + F + T   S   +
Sbjct: 600 IKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNSKTRDGFTVNTKVPSLKDQ 659

Query: 950 GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
           GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 660 GKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 698


>gi|410975127|ref|XP_003993986.1| PREDICTED: tetratricopeptide repeat protein 13, partial [Felis
           catus]
          Length = 684

 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 165/608 (27%), Positives = 288/608 (47%), Gaps = 78/608 (12%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
           +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A+ + +  I   P
Sbjct: 6   IGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEP 65

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED 
Sbjct: 66  DRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 124

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N
Sbjct: 125 QQSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGN 184

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++ 
Sbjct: 185 FEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKG 244

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDI 685
             + A+G++ E IK     +  +    +K   + L   Y +E + Y  + +++    ++I
Sbjct: 245 LSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNI 304

Query: 686 DGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVAD 744
           D D+   FK++W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD
Sbjct: 305 DVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFEGYKPEVQELICVAD 360

Query: 745 SIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRAR 804
            +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +N     NG    
Sbjct: 361 RLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG---- 407

Query: 805 RKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPC 864
            K R+                                   M W+D++ +AVKWR+I++P 
Sbjct: 408 -KTRL-----------------------------------MQWRDMFDIAVKWRRIADPD 431

Query: 865 DPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKAD 923
            PV+W++++ +   + GF +H  +I           N    L+V + + K    VH K +
Sbjct: 432 QPVLWLDQMPARSLSRGFNNHINLIRAN--------NPKGLLEVREALEK----VH-KVE 478

Query: 924 DIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSR 980
           D++ + +       + F + T   S   +GK+ +G  IT+         F++ T  T  R
Sbjct: 479 DLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEER 538

Query: 981 WDEFDAEM 988
              + AE+
Sbjct: 539 TQLYHAEI 546



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)

Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
            V  ++K+  +    RL   RG        YA+A   F Q L+ +   P A++ +G    
Sbjct: 87  AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 146

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
            +  L+ AI  F EA++      +A+K  GQA   LG    A +   KAL    N    L
Sbjct: 147 HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 206

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
             RG++ +       A+++   C++L+  N+      GL+  ++G++ +  +A  K +
Sbjct: 207 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 264


>gi|432946560|ref|XP_004083826.1| PREDICTED: tetratricopeptide repeat protein 13-like [Oryzias
           latipes]
          Length = 826

 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 162/628 (25%), Positives = 294/628 (46%), Gaps = 90/628 (14%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQ--RELEAAISDFTEAIQSNP 446
           +  G Y  AI  F  +L+ DP    A+ GRG A   ++ Q  +  + A+ +    I   P
Sbjct: 120 IGNGLYDEAIKHFSLLLQNDPELVSAIYGRGIAYGKKSLQDIKNADLALYELNRVIALEP 179

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+ AA+ED 
Sbjct: 180 NWPEVYEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLLFISEDYVAAMEDF 238

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L K    A  Y GL     G  K+A E   +A++L  +F++A+  L Q Y++L +
Sbjct: 239 QRSLELKKNQPIAMLYKGLTYFHRGMLKEAIETFKEALKLKSDFIDAYKSLGQAYRELGD 298

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A+E  Q+ L +++   ++  LRG++L+  G  ++A+ +    L ++P N  C Y++ 
Sbjct: 299 FESAMESFQKALMMNQNHIQSLQLRGMMLYHHGSLQEALGNFKRCLQLEPYNEVCQYMKG 358

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDI 685
             + A+G++ E IK     +  +    +K   + L   Y +E + Y  S ++     +++
Sbjct: 359 LSHVAMGQFYEGIKAQTKVMLNDPLLGQKASSEYLKVKYLREYSRYMHSHLDIPVAEYNV 418

Query: 686 DGDIDPLFKEYWCKRLH--PKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVA 743
           D D+   FK +W K L    ++  E+   QP ++D L +     + +S+  QK  ++  A
Sbjct: 419 DQDLPGNFKNHWAKNLPFLIEDYEEQPGLQPHIKDVLPQN---FESYSIEVQK--MICSA 473

Query: 744 DSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRA 803
           D +G  +QYD PGFL N+R HR  GLA +E+ Q + + W         SN     NGK  
Sbjct: 474 DHLGALMQYDTPGFLPNKRIHRAMGLATLEVMQAMHRTW---------SNSKVRVNGKTR 524

Query: 804 RRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEP 863
                                                   +M W+D++ +AVKWR+I++P
Sbjct: 525 ----------------------------------------QMQWRDMFDIAVKWRRIADP 544

Query: 864 CDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH--- 919
             PV+W++++ +   + GF +H  +I GQ   +RY   +   LD     +KD+  V+   
Sbjct: 545 DQPVLWLDQMPARSLSRGFNNHINLIRGQIINIRYLAYFDNILD----FIKDRILVYHGA 600

Query: 920 ----------------NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITL 960
                           N+ + ++ + +       + F + +   S    GK+ +G  IT+
Sbjct: 601 FNPRGLLEVRQALESVNRIEHLLPIMKQFNSKTRDGFTVNSKVPSMKDPGKEYDGFTITI 660

Query: 961 VKMGESGYDFAIRTPCTPSRWDEFDAEM 988
                    F++ T  T  R  ++ +E+
Sbjct: 661 TGDRVGNMLFSVETQTTEERTQQYQSEI 688


>gi|344247251|gb|EGW03355.1| Tetratricopeptide repeat protein 13 [Cricetulus griseus]
          Length = 677

 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 180/687 (26%), Positives = 319/687 (46%), Gaps = 90/687 (13%)

Query: 380  SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAA 434
            S +  L+     V  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A
Sbjct: 52   STNEELAIAYVLVGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELA 111

Query: 435  ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
            + + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F
Sbjct: 112  LFELSRVIALEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYF 170

Query: 495  KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              +D+  A ED    ++L++   +A  Y GL     G  K+A EA  +A++   +F++A+
Sbjct: 171  ISEDYATAHEDFEQSLELNRNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAY 230

Query: 555  GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
              L Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L +
Sbjct: 231  KSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQL 290

Query: 615  DPSNIECLYLRASCYHAIGEYREAIK-DYDAALDLELDSMEKFVLQCLAFYQKEIALYTA 673
            +P N  C Y++   + A+G++ E IK      L+  L   +         Y +E + Y  
Sbjct: 291  EPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLRVKYLREYSRYLH 350

Query: 674  SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
            + +++    ++ID D+   FK++W K L    + +    QP L+  +K   +  Q+F   
Sbjct: 351  AHLDTPLTEYNIDTDLPGSFKDHWAKNL--PFLIDGYEEQPGLQPHIK--DVLHQNFEGY 406

Query: 734  KQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYS 792
            + +   ++ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +
Sbjct: 407  RPEVQEMICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVHRTW---------T 457

Query: 793  NRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYT 852
            N     NG     K R+                                   M W+D++ 
Sbjct: 458  NSKVRMNG-----KTRL-----------------------------------MQWRDMFD 477

Query: 853  LAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMI-LGQAKVVRYFPNYARTLDVAKT 910
            +AVKWR+I++P  PV+W++++ +   + GF +H  +I +G         N   +++   T
Sbjct: 478  IAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRVG---------NILFSVETQTT 528

Query: 911  VMKDKKYVHNKADDII-DLSED----VVGEDFWLA-TWCN---STAFEGKQLEGTRITLV 961
              + + Y H + D +  DL+      ++  +F  A   CN   S  +    L       +
Sbjct: 529  EERTQLY-HAEIDALYKDLTAKGKVLILSSEFGEADAVCNLILSLVYYFYNL-----MPL 582

Query: 962  KMGESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWLYPSLKT 1021
              G S   +++      +   E   ++     VD+EA+       F    KSW+  +LK+
Sbjct: 583  SRGSSVIAYSVIVGALMASGKEVAGKIPKGKLVDFEAMTAPGSEAFSKIAKSWM--NLKS 640

Query: 1022 -STSWKEYPDVTSTFATTGSVVAALSS 1047
             S S+K  P V+ TF T  S++  L++
Sbjct: 641  ISPSYKTLPSVSETFPTLRSMMEVLNT 667


>gi|291234181|ref|XP_002737022.1| PREDICTED: P58IPK-like [Saccoglossus kowalevskii]
          Length = 1148

 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 166/637 (26%), Positives = 290/637 (45%), Gaps = 96/637 (15%)

Query: 389  IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQRELEAAISDFTEAIQSN 445
            I  +N   Y   I     +LK++P    A   RG A   + FQ   ++AI+D ++AIQ  
Sbjct: 443  IVLLNTKNYDGCIEQLTSLLKDNPNIIGAYHVRGAAYAKKGFQ-SADSAIADLSKAIQLQ 501

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+A E W+RR +   +LG + EA+ DL+ A+   P++    H RG V+FK +++ AA ED
Sbjct: 502  PNAPEGWERRAEIYMSLGRTNEALADLTTAITLVPSAKAYAH-RGTVHFKEENYLAAEED 560

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                ++LD +      + GLAL   G+ K + E     ++L+   ++    L   Y++L 
Sbjct: 561  FQKSLELDSKQSEIMHFRGLALYHQGKIKDSIEVFNTTLKLEPLCVDCRRSLGHAYRELG 620

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            + E +++     L + +   ++  LRG LL+  G+  +A+KD +  L +D +N  C Y+R
Sbjct: 621  DFETSMQHFNTALSLQEDHVQSLQLRGSLLYQSGRPLEALKDFNKCLSVDSTNEACEYMR 680

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ------CLAFYQKEIALYTASKINSE 679
               + +IG+Y EA+K      + ++ S   F+ Q          Y +E + Y  +++++ 
Sbjct: 681  GLSHASIGQYYEAVKS-----NAKVQSNPPFLGQKTSNEFARVLYIREYSRYLHARLDTP 735

Query: 680  FCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGK-LRRQDFSVTKQKTA 738
               + +D D+   +K+ W K L  K        QP L   +   + L   D     Q   
Sbjct: 736  VAEYSMDLDLQGAYKDNWAKGLPFK--YSGYEEQPGLSPEINDVEVLDFDDLPADVQN-- 791

Query: 739  LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSK 798
            L+  A S+G  +QY+  GFL N R H   GLA IEIAQ       ++Q  WK S  S ++
Sbjct: 792  LICTASSVGSMMQYEADGFLPNVRVHLAMGLAVIEIAQ-------TIQHFWKASKISKNQ 844

Query: 799  NGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWR 858
             G++                                            W++++ +AVKWR
Sbjct: 845  IGRK--------------------------------------------WREIFDIAVKWR 860

Query: 859  QISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVM----- 912
            ++ +P  PV+W++ + S+   +GF SH  ++ GQ   VRY   +    +V K ++     
Sbjct: 861  RVIDPDQPVLWLDLMPSKSIQAGFNSHMHLVRGQVNNVRYTKYFDVVFNVTKKMVAQYGV 920

Query: 913  ------KDKKYVHNKADDIIDLSEDVV-----------GEDFWLATWCNSTAFEGKQLEG 955
                  + ++ + +  D I    E +            G  F +AT  NS   + ++ +G
Sbjct: 921  NGNGHRRSEREILSTIDKITTCEELLKFVKKLKGNRNGGPGFMVATKLNSRKDKSQRYDG 980

Query: 956  TRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAW 992
               T+   G +G  F+I T  T  R +++ +E+   W
Sbjct: 981  VMFTMTGDG-NGILFSIDTATTKKRTEQYHSELEYIW 1016



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 22/233 (9%)

Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           +NEA  +    +T +  +K+ +      RG     E  Y +A   F + L+ D    E +
Sbjct: 521 TNEALADLTTAITLVPSAKAYA-----HRGTVHFKEENYLAAEEDFQKSLELDSKQSEIM 575

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
             RG A   Q +++ +I  F   ++  P   +  +  G A   LG+   ++Q  + AL  
Sbjct: 576 HFRGLALYHQGKIKDSIEVFNTTLKLEPLCVDCRRSLGHAYRELGDFETSMQHFNTALSL 635

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           + +    L  RG + ++      A++D + C+ +D  N++     GL+ +SIG+Y +A +
Sbjct: 636 QEDHVQSLQLRGSLLYQSGRPLEALKDFNKCLSVDSTNEACEYMRGLSHASIGQYYEAVK 695

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           ++ K +Q +  FL                +K      +VLYI + +S+  H R
Sbjct: 696 SNAK-VQSNPPFL---------------GQKTSNEFARVLYI-REYSRYLHAR 731


>gi|296472257|tpg|DAA14372.1| TPA: tetratricopeptide repeat domain 13 isoform 2 [Bos taurus]
          Length = 805

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 262/557 (47%), Gaps = 83/557 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K  
Sbjct: 169 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 227

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 228 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 287

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G   +A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 288 ALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 347

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 348 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 407

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 408 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYET 463

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 464 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 504

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 505 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 534

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------------- 919
           ++  + GF +H  +I GQ   +RY   + + L      +KD+  V+              
Sbjct: 535 AQSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 590

Query: 920 -----NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFA 971
                +K +D++ + +       + F + T   S   +GK+ +G  IT+         F+
Sbjct: 591 ALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFS 650

Query: 972 IRTPCTPSRWDEFDAEM 988
           + T  T  R   + AE+
Sbjct: 651 VETQTTEERTQLYHAEI 667



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 167 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 224

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 225 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 284

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +     + A+++   C++L+  N+      GL+  ++G
Sbjct: 285 FQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 344

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 345 QFYEGIKAQTKVM 357


>gi|22761790|dbj|BAC11700.1| unnamed protein product [Homo sapiens]
          Length = 806

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 263/556 (47%), Gaps = 82/556 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K  
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 349

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 350 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 409

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 410 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYET 465

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 466 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 506

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 507 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 536

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL----- 928
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A++   L     
Sbjct: 537 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 592

Query: 929 -------SEDVVG---------EDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAI 972
                   ED++          + F + T   S   +GK+ +G  IT+         F++
Sbjct: 593 ALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSV 652

Query: 973 RTPCTPSRWDEFDAEM 988
            T  T  R   + AE+
Sbjct: 653 ETQTTEERTQLYHAEI 668



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 169 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 226

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 227 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 286

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G
Sbjct: 287 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 346

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 347 QFYEGIKAQTKVM 359


>gi|296531396|ref|NP_001116307.2| tetratricopeptide repeat protein 13 isoform b [Homo sapiens]
          Length = 806

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 263/556 (47%), Gaps = 82/556 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K  
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 349

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 350 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 409

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 410 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYET 465

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 466 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 506

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 507 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 536

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL----- 928
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A++   L     
Sbjct: 537 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 592

Query: 929 -------SEDVVG---------EDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAI 972
                   ED++          + F + T   S   +GK+ +G  IT+         F++
Sbjct: 593 ALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSV 652

Query: 973 RTPCTPSRWDEFDAEM 988
            T  T  R   + AE+
Sbjct: 653 ETQTTEERTQLYHAEI 668



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 169 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 226

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 227 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 286

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G
Sbjct: 287 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 346

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 347 QFYEGIKAQTKVM 359


>gi|114573142|ref|XP_001149277.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Pan
           troglodytes]
          Length = 806

 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 263/556 (47%), Gaps = 82/556 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K  
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 349

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 350 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 409

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 410 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYET 465

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 466 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 506

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 507 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 536

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL----- 928
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A++   L     
Sbjct: 537 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 592

Query: 929 -------SEDVVG---------EDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAI 972
                   ED++          + F + T   S   +GK+ +G  IT+         F++
Sbjct: 593 ALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSV 652

Query: 973 RTPCTPSRWDEFDAEM 988
            T  T  R   + AE+
Sbjct: 653 ETQTTEERTQLYHAEI 668



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 169 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 226

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 227 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 286

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G
Sbjct: 287 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 346

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 347 QFYEGIKAQTKVM 359


>gi|390334343|ref|XP_787775.3| PREDICTED: tetratricopeptide repeat protein 13-like
           [Strongylocentrotus purpuratus]
          Length = 926

 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 155/641 (24%), Positives = 289/641 (45%), Gaps = 84/641 (13%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQRELEAA--IS 436
           D++L   I  +N G+   A+ +   ++K+DP +  A   R  A   R  Q  L AA  I 
Sbjct: 207 DYKLGFSIVLLNTGREEMALDMISALIKQDPKFIGAYHARAVAYSRRGMQHPLNAALAIQ 266

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           DFT AI+ +P     W++R +  +  G + EA  D+SKA++  P +A +   RG + FK 
Sbjct: 267 DFTRAIELDPRNPIGWEKRAEVFSTQGRNREAYGDISKAIDLRP-TAKLYKYRGYMMFKE 325

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           + + AA +DL   VK DK        L ++L   G+  ++     KA+++  ++++    
Sbjct: 326 EKYVAATKDLMESVKEDKTQVDVMHLLAISLYHQGKLHESIRIFKKALEIKPDYVDVLRS 385

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           L + Y++L + E +L+   + L+      ++  LRG L +  G+ ++A+ D    LG+DP
Sbjct: 386 LARAYRELGDYENSLDSFNKALHYSPHHVQSIQLRGSLHYHTGKPREALSDFQFCLGLDP 445

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKI 676
           +N  C Y++ +C  ++G+Y +A++     L ++ D    ++      Y +E++ Y  + +
Sbjct: 446 TNEVCRYMKGACLVSMGQYYDAVRTV-TKLMIQHDITAGYLEYEKVKYIRELSRYLHAHL 504

Query: 677 NSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKK-GKLRRQDFSVTKQ 735
           ++ F  + +D D+D   K+ W K L  ++  E     P L   +     L   D   + +
Sbjct: 505 DTPFSEYSMDQDLDGTMKDRWVKNLPFQS--EGYKEMPGLTPDISDVDHLEFHDLLPSVR 562

Query: 736 KTALLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRS 795
              L+  A +IG+  QYD  GFL N+R     GL ++E+AQ       ++Q  WK+    
Sbjct: 563 --TLICRAATIGRLSQYDADGFLPNKRMQLALGLGSLEVAQ-------TMQLYWKHGRNF 613

Query: 796 SSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAV 855
            + NGKR                                            W+D+  +AV
Sbjct: 614 RNGNGKR------------------------------------------FGWRDMMDIAV 631

Query: 856 KWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVM-- 912
           KWR+  +P  PV+W+ ++ S  + +G+ SH  ++ GQ   +RY   +    ++ K ++  
Sbjct: 632 KWRRYVDPDQPVLWLEQMPSSSYQAGYNSHMNIVRGQLLDIRYASYFDTVFNLTKRMIYQ 691

Query: 913 -------KDKKYVHNKADDI------------IDLSEDVVGEDFWLATWCNSTAFEGKQL 953
                  + ++ +    D +            + +S D +   F ++T  +S      +L
Sbjct: 692 HSLLKRDRGEERLLANLDKVASCEGLLFLVNKLKMSNDKL-PGFMISTRLDSFQNRNAKL 750

Query: 954 EGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWEV 994
           EG   +L     +   F+I T  T  R + +  E+   W +
Sbjct: 751 EGAVFSLSGEVAANIMFSIDTMTTKQRTEHYHTEIDFIWAL 791



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 6/111 (5%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL--- 431
           K     VD      I+  ++GK   +I IF + L+  P Y + L  R  ARA+ REL   
Sbjct: 340 KEDKTQVDVMHLLAISLYHQGKLHESIRIFKKALEIKPDYVDVL--RSLARAY-RELGDY 396

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
           E ++  F +A+  +P   ++ + RG      G+  EA+ D    L  +P +
Sbjct: 397 ENSLDSFNKALHYSPHHVQSIQLRGSLHYHTGKPREALSDFQFCLGLDPTN 447


>gi|410218576|gb|JAA06507.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
 gi|410264778|gb|JAA20355.1| tetratricopeptide repeat domain 13 [Pan troglodytes]
          Length = 807

 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 262/557 (47%), Gaps = 83/557 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K  
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 349

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 350 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 409

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 410 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYET 465

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 466 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 506

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 507 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 536

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------------- 919
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V+              
Sbjct: 537 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 592

Query: 920 -----NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFA 971
                +K +D++ + +       + F + T   S   +GK+ +G  IT+         F+
Sbjct: 593 ALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFS 652

Query: 972 IRTPCTPSRWDEFDAEM 988
           + T  T  R   + AE+
Sbjct: 653 VETQTTEERTQLYHAEI 669



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 169 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 226

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 227 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 286

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G
Sbjct: 287 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 346

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 347 QFYEGIKAQTKVM 359


>gi|311271182|ref|XP_001926679.2| PREDICTED: tetratricopeptide repeat protein 13 isoform 1 [Sus
           scrofa]
          Length = 804

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 263/556 (47%), Gaps = 82/556 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K  
Sbjct: 169 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 227

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 228 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 287

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 288 ALLLNQNHVQTLQLRGVMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 347

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 348 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 407

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 408 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELVCVADRLGSLMQYET 463

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 464 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 504

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 505 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 534

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL----- 928
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A++   L     
Sbjct: 535 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 590

Query: 929 -------SEDVVG---------EDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAI 972
                   ED++          + F + T   S   +GK+ +G  IT+         F++
Sbjct: 591 ALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSV 650

Query: 973 RTPCTPSRWDEFDAEM 988
            T  T  R   + AE+
Sbjct: 651 ETQTTEERTQLYHAEI 666



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 167 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 224

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 225 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 284

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G
Sbjct: 285 FQKALLLNQNHVQTLQLRGVMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 344

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 345 QFYEGIKAQTKVM 357


>gi|297281853|ref|XP_001107001.2| PREDICTED: tetratricopeptide repeat protein 13 isoform 4 [Macaca
           mulatta]
          Length = 807

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 262/557 (47%), Gaps = 83/557 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K  
Sbjct: 171 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 229

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 289

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 290 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 349

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 350 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 409

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 410 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYET 465

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 466 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 506

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 507 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 536

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------------- 919
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V+              
Sbjct: 537 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 592

Query: 920 -----NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFA 971
                +K +D++ + +       + F + T   S   +GK+ +G  IT+         F+
Sbjct: 593 ALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFS 652

Query: 972 IRTPCTPSRWDEFDAEM 988
           + T  T  R   + AE+
Sbjct: 653 VETQTTEERTQLYHAEI 669



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 169 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 226

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 227 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 286

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G
Sbjct: 287 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 346

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 347 QFYEGIKAQTKVM 359


>gi|395531632|ref|XP_003767879.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2
           [Sarcophilus harrisii]
          Length = 806

 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 262/556 (47%), Gaps = 82/556 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG ++F  +D+  A ED    ++L+K  
Sbjct: 171 QILSPLGRISEAVSDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDFQQSLELNKNQ 229

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 230 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQR 289

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G + 
Sbjct: 290 ALILNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGHFY 349

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 350 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 409

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K     L+ VAD +G  +QY+ 
Sbjct: 410 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLPQNFESYKPDVQELICVADRLGSLMQYET 465

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 466 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------ANSKVRMNG-----KTRL----- 506

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 507 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 536

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL----- 928
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A++   L     
Sbjct: 537 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 592

Query: 929 -------SEDVVG---------EDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAI 972
                   ED++          + F + T   S   +GK+ +G  IT+         F++
Sbjct: 593 ALEKVHKVEDLLPIMKFNSKTRDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSV 652

Query: 973 RTPCTPSRWDEFDAEM 988
            T  T  R   + AE+
Sbjct: 653 ETQTTEERTQLYHAEI 668



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 2/178 (1%)

Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
            V+ ++K+  +    RL   RG        YA+A   F Q L+ +   P A++ +G    
Sbjct: 182 AVSDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 241

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
            +  L+ AI  F EA++      +A+K  GQA   LG    A +   +AL    N    L
Sbjct: 242 HRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGNFEAATESFQRALILNQNHVQTL 301

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
             RG++ +       A+++   C++L+  N+      GL+  ++G + +  +A  K +
Sbjct: 302 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGHFYEGIKAQTKVM 359


>gi|426255522|ref|XP_004021397.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Ovis
           aries]
          Length = 805

 Score =  203 bits (517), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 262/556 (47%), Gaps = 82/556 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K  
Sbjct: 170 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 228

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 229 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 288

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G   +A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 289 ALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 348

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 349 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 408

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 409 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYET 464

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 465 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 505

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 506 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 535

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL----- 928
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A++   L     
Sbjct: 536 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 591

Query: 929 -------SEDVVG---------EDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAI 972
                   ED++          + F + T   S   +GK+ +G  IT+         F++
Sbjct: 592 ALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSV 651

Query: 973 RTPCTPSRWDEFDAEM 988
            T  T  R   + AE+
Sbjct: 652 ETQTTEERTQLYHAEI 667



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 168 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 225

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 226 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 285

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +     + A+++   C++L+  N+      GL+  ++G
Sbjct: 286 FQKALLLNQNHVQTLQLRGMMLYHHGSLHEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 345

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 346 QFYEGIKAQTKVM 358


>gi|291402200|ref|XP_002717430.1| PREDICTED: tetratricopeptide repeat domain 13 isoform 2
           [Oryctolagus cuniculus]
          Length = 812

 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 262/557 (47%), Gaps = 83/557 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L++  
Sbjct: 176 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQ 234

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 235 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 294

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 295 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 354

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 355 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 414

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 415 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYET 470

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 471 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 511

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 512 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 541

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------------- 919
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V+              
Sbjct: 542 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 597

Query: 920 -----NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFA 971
                +K +D++ + +       + F + T   S   +GK+ +G  IT+         F+
Sbjct: 598 ALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFS 657

Query: 972 IRTPCTPSRWDEFDAEM 988
           + T  T  R   + AE+
Sbjct: 658 VETQTTEERTQLYHAEI 674



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 174 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 231

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 232 RNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 291

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G
Sbjct: 292 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 351

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 352 QFYEGIKAQTKVM 364


>gi|73952536|ref|XP_857193.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 3 [Canis
           lupus familiaris]
          Length = 805

 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 263/556 (47%), Gaps = 82/556 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K  
Sbjct: 170 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 228

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 229 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 288

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 289 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 348

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    +++D D+   FK+
Sbjct: 349 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNVDVDLPGSFKD 408

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 409 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYET 464

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 465 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 505

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 506 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 535

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL----- 928
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A++   L     
Sbjct: 536 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 591

Query: 929 -------SEDVVG---------EDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAI 972
                   ED++          + F + T   S   +GK+ +G  IT+         F++
Sbjct: 592 ALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKIGNILFSV 651

Query: 973 RTPCTPSRWDEFDAEM 988
            T  T  R   + AE+
Sbjct: 652 ETQTTEERTQFYHAEI 667



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 168 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 225

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 226 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 285

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G
Sbjct: 286 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 345

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 346 QFYEGIKAQTKVM 358


>gi|395849729|ref|XP_003797468.1| PREDICTED: tetratricopeptide repeat protein 13 isoform 2 [Otolemur
           garnettii]
          Length = 809

 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 151/556 (27%), Positives = 262/556 (47%), Gaps = 82/556 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K  
Sbjct: 174 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 232

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 233 PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 292

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 293 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 352

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 353 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 412

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K     L+ VAD +G  +QY+ 
Sbjct: 413 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPDVQELICVADRLGSLMQYET 468

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 469 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 509

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 510 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 539

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL----- 928
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A++   L     
Sbjct: 540 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 595

Query: 929 -------SEDVVG---------EDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAI 972
                   ED++          + F + T   S   +GK+ +G  IT+         F++
Sbjct: 596 ALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSV 655

Query: 973 RTPCTPSRWDEFDAEM 988
            T  T  R   + AE+
Sbjct: 656 ETQTTEERTQLYHAEI 671



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 172 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 229

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 230 KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 289

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G
Sbjct: 290 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 349

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 350 QFYEGIKAQTKVM 362


>gi|209954827|ref|NP_001129634.1| tetratricopeptide repeat protein 13 precursor [Rattus norvegicus]
          Length = 792

 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 151/560 (26%), Positives = 260/560 (46%), Gaps = 89/560 (15%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L++  
Sbjct: 156 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNRNQ 214

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
            +A  Y GL     G  K+A EA  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 215 PTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 274

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A G++ 
Sbjct: 275 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVATGQFY 334

Query: 637 EAIK-DYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK      L+  L   +         Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 335 EGIKAQTKVMLNDPLPGQKASPEYLRVKYLREYSRYLHAHLDTPLTEYNIDTDLPGSFKD 394

Query: 696 YWCKRLHP---KNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQ 751
           +W K L P       E+   QP +RD L       Q+F   K +   L+ VAD +G  +Q
Sbjct: 395 HWAKNL-PFLIDGYEEQPGLQPHIRDVL------HQNFEGYKPEVQELICVADRLGSLMQ 447

Query: 752 YDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINI 811
           Y+ PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+  
Sbjct: 448 YETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL-- 491

Query: 812 ASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVN 871
                                            M W+D++ +AVKWR+I++P  PV+W++
Sbjct: 492 ---------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLD 518

Query: 872 KL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH----------- 919
           ++ +   + GF +H  +I GQ   +RY   + + L      +KD+  V+           
Sbjct: 519 QMPAPSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLE 574

Query: 920 --------NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGY 968
                   +K +D++ + +       + F + T   S   +GK+ +G  IT+        
Sbjct: 575 VREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNI 634

Query: 969 DFAIRTPCTPSRWDEFDAEM 988
            F++ T  T  R   + AE+
Sbjct: 635 LFSVETQTTEERTQLYHAEI 654



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 154 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 211

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 212 RNQPTAMLYKGLTFFHRGLLKEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 271

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  + G
Sbjct: 272 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVATG 331

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 332 QFYEGIKAQTKVM 344


>gi|119590336|gb|EAW69930.1| tetratricopeptide repeat domain 13, isoform CRA_b [Homo sapiens]
          Length = 639

 Score =  202 bits (515), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 262/557 (47%), Gaps = 83/557 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K  
Sbjct: 3   QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQ 61

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 62  PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 121

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 122 ALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 181

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK+
Sbjct: 182 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKD 241

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 242 HWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYET 297

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 298 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 338

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR+I++P  PV+W++++ 
Sbjct: 339 ------------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMP 368

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------------- 919
           +   + GF +H  +I GQ   +RY   + + L      +KD+  V+              
Sbjct: 369 ARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 424

Query: 920 -----NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFA 971
                +K +D++ + +       + F + T   S   +GK+ +G  IT+         F+
Sbjct: 425 ALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFS 484

Query: 972 IRTPCTPSRWDEFDAEM 988
           + T  T  R   + AE+
Sbjct: 485 VETQTTEERTQLYHAEI 501



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 1   MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELN 58

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 59  KNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 118

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G
Sbjct: 119 FQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 178

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 179 QFYEGIKAQTKVM 191


>gi|348575498|ref|XP_003473525.1| PREDICTED: tetratricopeptide repeat protein 13-like [Cavia
           porcellus]
          Length = 792

 Score =  202 bits (514), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 145/557 (26%), Positives = 264/557 (47%), Gaps = 83/557 (14%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL+KA++ +P SA +   RG ++F  +D+  A ED    ++L++  
Sbjct: 156 QILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLHFISEDYATAHEDFQQSLELNRNQ 214

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
            +A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 215 PTAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 274

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +++   +   LRG++L+  G   +A+K+    L ++P N  C Y++   + A+G++ 
Sbjct: 275 ALLLNQNHVQTLQLRGMMLYHHGSLPEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 334

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E IK     +  +    +K   + L   Y +E + Y  + +++    +++D D+   FK+
Sbjct: 335 EGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNVDVDLPGSFKD 394

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
           +W K L    + +    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 395 HWAKNL--PFLIDDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYET 450

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
           PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R+     
Sbjct: 451 PGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL----- 491

Query: 815 NRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL- 873
                                         M W+D++ +AVKWR++++P  PV+W++++ 
Sbjct: 492 ------------------------------MQWRDMFDIAVKWRRVADPDQPVLWLDQMP 521

Query: 874 SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------------- 919
           ++  + GF +H  +I GQ   +RY   + + L      +KD+  V+              
Sbjct: 522 AQSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVRE 577

Query: 920 -----NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFA 971
                +K +D++ + +       + F + T   S   +GK+ +G  IT+         F+
Sbjct: 578 ALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFS 637

Query: 972 IRTPCTPSRWDEFDAEM 988
           + T  T  R   + AE+
Sbjct: 638 VETQTTEERTQLYHAEI 654



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 4/193 (2%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKED 411
           ML+  S   + N+   V  ++K+  +    RL   RG        YA+A   F Q L+ +
Sbjct: 154 MLQILSPLGRINE--AVNDLTKAIQLQPSARLYRHRGTLHFISEDYATAHEDFQQSLELN 211

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
              P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A + 
Sbjct: 212 RNQPTAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATES 271

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G
Sbjct: 272 FQKALLLNQNHVQTLQLRGMMLYHHGSLPEALKNFKRCLQLEPYNEVCQYMKGLSHVAMG 331

Query: 532 EYKKAEEAHLKAI 544
           ++ +  +A  K +
Sbjct: 332 QFYEGIKAQTKVM 344


>gi|355726727|gb|AES08962.1| tetratricopeptide repeat domain 13 [Mustela putorius furo]
          Length = 636

 Score =  202 bits (513), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 261/554 (47%), Gaps = 83/554 (14%)

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
           + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K    A
Sbjct: 3   SPLGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIA 61

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
             Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+ L 
Sbjct: 62  MLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALL 121

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ E I
Sbjct: 122 LNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGI 181

Query: 640 KDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWC 698
           K     +  +    +K   + L   Y +E + Y  + +++    ++ID D+   FK++W 
Sbjct: 182 KAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKDHWA 241

Query: 699 KRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGF 757
           K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ PGF
Sbjct: 242 KNL--PFLLEDYEEQPGLQPHIK--DVLHQNFESYKPEVQELICVADRLGSLMQYETPGF 297

Query: 758 LSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRG 817
           L N+R HR  GLAA+E+ Q V + W         +N     NG     K R+        
Sbjct: 298 LPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTRL-------- 335

Query: 818 GAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEE 876
                                      M W+D++ +AVKWR+I++P  PV+W++++ +  
Sbjct: 336 ---------------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMPARS 368

Query: 877 FNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH----------------- 919
            + GF +H  +I GQ   +RY   + + L      +KD+  V+                 
Sbjct: 369 LSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVREALE 424

Query: 920 --NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRT 974
             +K +D++ + +       + F + T   S   +GK+ +G  IT+         F++ T
Sbjct: 425 KVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKEQGKEYDGFTITITGDKVGNILFSVET 484

Query: 975 PCTPSRWDEFDAEM 988
             T  R   + AE+
Sbjct: 485 QTTEERTQFYHAEI 498



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 2/178 (1%)

Query: 369 CVTRISKSKSISVDFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
            V  ++K+  +    RL   RG        YA+A   F Q L+ +   P A++ +G    
Sbjct: 11  AVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFF 70

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
            +  L+ AI  F EA++      +A+K  GQA   LG    A +   KAL    N    L
Sbjct: 71  HRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTL 130

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
             RG++ +       A+++   C++L+  N+      GL+  ++G++ +  +A  K +
Sbjct: 131 QLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVM 188


>gi|432111813|gb|ELK34856.1| Tetratricopeptide repeat protein 13 [Myotis davidii]
          Length = 736

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 163/633 (25%), Positives = 288/633 (45%), Gaps = 99/633 (15%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ--------REL 431
           S +  L+     +  G Y  AI  F  +L+E+P    A+ GRG A   +          +
Sbjct: 41  STNEELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHILSPLGRI 100

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             A++D T+AIQ  PSA   ++ RG            +  +S+A  F P +         
Sbjct: 101 SEAVNDLTKAIQLQPSA-RLYRHRG-----------TLYFISEASPFCPEALPCAMRNT- 147

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                +D+  A ED    + L++    A  Y GL     G  K+A E+  +A++   +F+
Sbjct: 148 -----EDYATAHEDFQQSLALNRNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFI 202

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +A+  L Q Y++L N E A E  Q+ L +++   +   LRGL+L+  G  ++A+K+    
Sbjct: 203 DAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGLMLYHHGSLQEALKNFKRC 262

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIAL 670
           L ++P N  C Y+R   + A+G++ E IK     +  +    +K   + L   Y +E + 
Sbjct: 263 LQLEPYNEVCQYMRGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSR 322

Query: 671 YTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDF 730
           Y  + +++    +++D D+   FK++W K L    + E    QP L+  +K   +  Q+F
Sbjct: 323 YLHAHLDTPLTEYNVDADLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIK--DVLHQNF 378

Query: 731 SVTKQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEW 789
              K +   L+  AD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W       
Sbjct: 379 ESYKPEVQELICAADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW------- 431

Query: 790 KYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQD 849
                +SSK   R   K R+                                   M W+D
Sbjct: 432 -----TSSK--VRMNGKTRL-----------------------------------MQWRD 449

Query: 850 VYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVA 908
           ++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L   
Sbjct: 450 MFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH-- 507

Query: 909 KTVMKDKKYVHNKADD---IIDLSEDV----------VGEDFWLATWCNSTAFEGKQLEG 955
              +KD+  +++ A++   ++++ E +            + F + T   S   +GK+ +G
Sbjct: 508 --FIKDRILIYHGANNPKGLLEVREALEKVHKQFNTKTKDGFTVNTKVPSLKDQGKEYDG 565

Query: 956 TRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
             IT+         F++ T  T  R   + AE+
Sbjct: 566 FTITITGDKVGNILFSVETQTTEERTQLYHAEI 598


>gi|119590339|gb|EAW69933.1| tetratricopeptide repeat domain 13, isoform CRA_e [Homo sapiens]
          Length = 700

 Score =  199 bits (505), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 161/623 (25%), Positives = 278/623 (44%), Gaps = 102/623 (16%)

Query: 407 ILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           +L+E+P    A+ GRG A   +     +  E A+ + +  I   P   E +++R +  + 
Sbjct: 1   MLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDRPEVFEQRAEILSP 60

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED    ++L+K    A  
Sbjct: 61  LGRINEAVNDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAML 119

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRN-----------FLEAWGHLTQFYQDLANSEKA 570
           Y GL     G  K   E+     Q  RN           F E W        +L N E A
Sbjct: 120 YKGLTFFHRGLLKNEVESCAVIRQEPRNQRLLKAEEKSDFEELW---RPSMLELGNFEAA 176

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
            E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + 
Sbjct: 177 TESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHV 236

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDI 689
           A+G++ E IK     +  +    +K   + L   Y +E + Y  + +++    ++ID D+
Sbjct: 237 AMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDL 296

Query: 690 DPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGK 748
              FK++W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G 
Sbjct: 297 PGSFKDHWAKNL--PFLIEDYEEQPGLQPHIKD--VLHQNFESYKPEVQELICVADRLGS 352

Query: 749 KIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDR 808
            +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +N     NG     K R
Sbjct: 353 LMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-----KTR 398

Query: 809 INIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVV 868
           +                                   M W+D++ +AVKWR+I++P  PV+
Sbjct: 399 L-----------------------------------MQWRDMFDIAVKWRRIADPDQPVL 423

Query: 869 WVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------- 919
           W++++ +   + GF +H  +I GQ   +RY   + + L      +KD+  V+        
Sbjct: 424 WLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKG 479

Query: 920 -----------NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGE 965
                      +K +D++ + +       + F + T   S   +GK+ +G  IT+     
Sbjct: 480 LLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKV 539

Query: 966 SGYDFAIRTPCTPSRWDEFDAEM 988
               F++ T  T  R   + AE+
Sbjct: 540 GNILFSVETQTTEERTQLYHAEI 562


>gi|326915587|ref|XP_003204096.1| PREDICTED: tetratricopeptide repeat protein 13-like [Meleagris
           gallopavo]
          Length = 685

 Score =  193 bits (490), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 158/626 (25%), Positives = 275/626 (43%), Gaps = 130/626 (20%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-----RELEAAISDFTEAIQSNP 446
           +  G Y  AI  F  +L+E+P    A+ GRG A   +     +  E A+ + +  I   P
Sbjct: 71  IGNGLYDEAIRQFSTMLQEEPELVSAIYGRGIAYGKKGLHDMKNAELALFELSRVISLEP 130

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              E +++R +  + LG   EA+ DL+KA++ +P SA +   RG + F  +D+  A ED 
Sbjct: 131 DHPEVFEQRAEILSPLGRISEALSDLTKAIQLQP-SARLYRHRGTLYFISEDYATAHEDF 189

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L+K    A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N
Sbjct: 190 QHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKADFIDAYKSLGQAYRELGN 249

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + A E  Q+ L +++   +   L+G++L                               
Sbjct: 250 FDAATESFQKALLLNQNHVQTLQLKGMML------------------------------- 278

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
             YH  G   EA+K++       L+++ + +  C      E + Y  + +++    ++ID
Sbjct: 279 --YHH-GSLDEALKNFKVC----LNTISQRIFLC-----TEYSRYLHAHLDTPLTEYNID 326

Query: 687 GDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDF-SVTKQKTALLLVADS 745
            D+   FK++W K L    + E    QP L+  +K   +  Q+F S       L+ VAD 
Sbjct: 327 IDLPGNFKDHWAKNL--PFLIENYEEQPGLQPHIK--DVLFQNFESYRTDVQELICVADH 382

Query: 746 IGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARR 805
           +G  +QY+ PGFL N+R HR  GLA +E+ Q V + W         +N     NG     
Sbjct: 383 LGSMMQYETPGFLPNKRIHRAMGLATLEVMQAVQRTW---------ANSKVRMNG----- 428

Query: 806 KDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCD 865
           K R+                                   M W+D++ +AVKWR+I++P  
Sbjct: 429 KTRL-----------------------------------MQWRDMFDIAVKWRRIADPDQ 453

Query: 866 PVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADD 924
           PV+W++++ +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ A++
Sbjct: 454 PVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANN 509

Query: 925 IIDLS------------EDVVG----------EDFWLATWCNSTAFEGKQLEGTRITLVK 962
              L             ED++           + F + T   S   +GK+ +G  IT+  
Sbjct: 510 PKGLMEVREALEKVHKVEDLLPIMKQFNSKTRDGFTVNTKVPSLKDQGKEYDGFTITITG 569

Query: 963 MGESGYDFAIRTPCTPSRWDEFDAEM 988
                  F++ T  T  R   + AE+
Sbjct: 570 DKVGNILFSVETQTTEERTQLYHAEI 595



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 54/124 (43%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG        YA+A   F   L+ +   P A++ +G     +  L+ AI  F EA++   
Sbjct: 172 RGTLYFISEDYATAHEDFQHSLELNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKA 231

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+K  GQA   LG    A +   KAL    N    L  +G++ +     + A+++ 
Sbjct: 232 DFIDAYKSLGQAYRELGNFDAATESFQKALLLNQNHVQTLQLKGMMLYHHGSLDEALKNF 291

Query: 507 SACV 510
             C+
Sbjct: 292 KVCL 295


>gi|119590337|gb|EAW69931.1| tetratricopeptide repeat domain 13, isoform CRA_c [Homo sapiens]
          Length = 678

 Score =  192 bits (488), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 153/593 (25%), Positives = 264/593 (44%), Gaps = 97/593 (16%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E A+ + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG 
Sbjct: 9   ELALFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGT 67

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN-- 549
           + F  +D+  A ED    ++L+K    A  Y GL     G  K   E+     Q  RN  
Sbjct: 68  LYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKNEVESCAVIRQEPRNQR 127

Query: 550 ---------FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
                    F E W        +L N E A E  Q+ L +++   +   LRG++L+  G 
Sbjct: 128 LLKAEEKSDFEELW---RPSMLELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGS 184

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
            ++A+K+    L ++P N  C Y++   + A+G++ E IK     +  +    +K   + 
Sbjct: 185 LQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEY 244

Query: 661 LAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDS 719
           L   Y +E + Y  + +++    ++ID D+   FK++W K L    + E    QP L+  
Sbjct: 245 LKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPH 302

Query: 720 LKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKV 778
           +K   +  Q+F   K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V
Sbjct: 303 IKD--VLHQNFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAV 360

Query: 779 SKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEER 838
            + W         +N     NG     K R+                             
Sbjct: 361 QRTW---------TNSKVRMNG-----KTRL----------------------------- 377

Query: 839 SSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRY 897
                 M W+D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I GQ   +RY
Sbjct: 378 ------MQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRY 431

Query: 898 FPNYARTLDVAKTVMKDKKYVH-------------------NKADDIIDLSEDV---VGE 935
              + + L      +KD+  V+                   +K +D++ + +       +
Sbjct: 432 LEYFEKILH----FIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKD 487

Query: 936 DFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
            F + T   S   +GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 488 GFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 540



 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 3/106 (2%)

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           QD+ N+E AL  L +V+ ++    + +  R  +L  LG+  +A+ DL+  + + PS    
Sbjct: 3   QDIKNAELALFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQPS--AR 60

Query: 622 LYL-RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           LY  R + Y    +Y  A +D+  +L+L  +     + + L F+ +
Sbjct: 61  LYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHR 106


>gi|119590338|gb|EAW69932.1| tetratricopeptide repeat domain 13, isoform CRA_d [Homo sapiens]
          Length = 568

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 164/636 (25%), Positives = 279/636 (43%), Gaps = 106/636 (16%)

Query: 432  EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
            E A+ + +  I   P   E +++R +  + LG   EA+ DL+KA++ +P SA +   RG 
Sbjct: 9    ELALFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQP-SARLYRHRGT 67

Query: 492  VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN-- 549
            + F  +D+  A ED    ++L+K    A  Y GL     G  K   E+     Q  RN  
Sbjct: 68   LYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHRGLLKNEVESCAVIRQEPRNQR 127

Query: 550  ---------FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
                     F E W        +L N E A E  Q+ L +++   +   LRG++L+  G 
Sbjct: 128  LLKAEEKSDFEELW---RPSMLELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGS 184

Query: 601  HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
             ++A+K+    L ++P N  C Y++   + A+G++ E IK     +  +    +K   + 
Sbjct: 185  LQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEY 244

Query: 661  LAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDS 719
            L   Y +E + Y  + +++    ++ID D+   FK++W K L    + E    QP L+  
Sbjct: 245  LKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPH 302

Query: 720  LKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKV 778
            +K   +  Q+F   K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V
Sbjct: 303  IKD--VLHQNFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAV 360

Query: 779  SKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEER 838
             + W         +N     NG     K R+                             
Sbjct: 361  QRTW---------TNSKVRMNG-----KTRL----------------------------- 377

Query: 839  SSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRY 897
                  M W+D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I         
Sbjct: 378  ------MQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRAN------ 425

Query: 898  FPNYARTLDVAKTVMKDKKY-----VHNKADDIIDLSEDVVGEDFWLATWCNSTAFEGKQ 952
              N    L+V + + K  K      +  +AD + +L   +V   + L          G  
Sbjct: 426  --NPKGLLEVREALEKVHKVEDLLPIMKEADAVCNLILSLVYYFYNLMPLS-----RGSS 478

Query: 953  LEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHFFLDSVK 1012
            +    + +  +  SG + A + P                  VD+EA+       F    K
Sbjct: 479  VIAYSVIVGALMASGKEVAGKIP--------------KGKLVDFEAMTAPGSEAFSKVAK 524

Query: 1013 SWLYPSLKT-STSWKEYPDVTSTFATTGSVVAALSS 1047
            SW+  +LK+ S S+K  P V+ TF T  S++  L++
Sbjct: 525  SWM--NLKSISPSYKTLPSVSETFPTLRSMIEVLNT 558



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 3/106 (2%)

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           QD+ N+E AL  L +V+ ++    + +  R  +L  LG+  +A+ DL+  + + PS    
Sbjct: 3   QDIKNAELALFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQPS--AR 60

Query: 622 LYL-RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           LY  R + Y    +Y  A +D+  +L+L  +     + + L F+ +
Sbjct: 61  LYRHRGTLYFISEDYATAHEDFQQSLELNKNQPIAMLYKGLTFFHR 106


>gi|388522451|gb|AFK49287.1| unknown [Lotus japonicus]
          Length = 174

 Score =  179 bits (453), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/175 (57%), Positives = 125/175 (71%), Gaps = 10/175 (5%)

Query: 33  MASAITA-RIELAKLCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRD 91
           MA A T+ R+EL + C+ ++WSKAIR+LDSL+++S  IQDICNRAFCY +LELHKHVI+D
Sbjct: 1   MAPAATSERVELTRFCASKDWSKAIRVLDSLISRSASIQDICNRAFCYGKLELHKHVIKD 60

Query: 92  CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLT 151
           CD+ALQLDP  LQ +ILKGCA S LGRK +AL VWE+GYEHALH S DL+Q LELEELL 
Sbjct: 61  CDRALQLDPAFLQPHILKGCALSELGRKADALLVWEQGYEHALHHSGDLRQLLELEELLR 120

Query: 152 AAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK-----SDICDSS 201
            AKQ      E       +S+ +SES   +N+  SET +N ++      D CD S
Sbjct: 121 TAKQGNDALSE----TRAASVPLSESRSLSNENSSETDKNQDRLAQLCGDACDKS 171


>gi|407039100|gb|EKE39457.1| TPR repeat protein [Entamoeba nuttalli P19]
          Length = 890

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 208/419 (49%), Gaps = 22/419 (5%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           +  I +D  +++G   VN GK   AI+ FDQ+LK  P      +GRG+A+A   +L+ A+
Sbjct: 218 TNDIELDREIAKGYLYVNTGKLKEAITHFDQLLKNHPNVLAGYLGRGSAKAMLGDLQKAL 277

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           +DF  A++ +   G+A+KRRGQ + ALG++  A++D +KA+E  P   D   +RG     
Sbjct: 278 TDFNLAVKKDNKCGDAYKRRGQVKLALGQTQSALEDFNKAIELTPEEGDCYRQRGSAYHA 337

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
              F+ A ED+   +KL   + +    L L  + +G   ++   + +AI    +++E + 
Sbjct: 338 LGIFDKAAEDIKKSIKLIPGDATLLNELALCYNGMGLVDESINTYTRAINTKEDYVEPYI 397

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           HL Q Y+D+    +A + L++ + +      +Y++   +L   G+HK+A+  LS  L I 
Sbjct: 398 HLGQLYRDIGCYVRAKQLLEKAMKLAPTNHLSYYVMANVLASAGRHKEALPLLSRSLSIC 457

Query: 616 PS--NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTA 673
           P     +   L A+   A+G  R  +K      + + ++         ++Y  EIA Y A
Sbjct: 458 PPERTGDIHRLNATACLALGMNRSCLKSAKLGYEAKDNA---------SWYFGEIAKYQA 508

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
             I+  F  +D++    P +K  + KRL   N    V + PP    L+         +  
Sbjct: 509 MMIDKPFLEYDLEW-FPPQWKVNFAKRLPIGN----VKKYPPGNVPLQITTEDIDTKTTV 563

Query: 734 KQKTA--LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWK 790
           KQ+    LL+ A  +G K+QY+  GF  N RQ+   GL AI IAQ    + ++ Q  W+
Sbjct: 564 KQELVKDLLIPAIKVGDKMQYNELGFGKNGRQYLACGLGAICIAQ----LLQTKQMGWR 618



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 106/181 (58%), Gaps = 11/181 (6%)

Query: 844  KMSWQDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYA 902
            +M W+++  + VK+RQ++EP D  +W++KL  ++F  GFGS+T +   Q +V RY+P + 
Sbjct: 614  QMGWREIAEILVKFRQVAEPADGAIWIDKLPRQQFEEGFGSNTTLKTAQTRVARYWPMFP 673

Query: 903  RTLDVAKTVM-------KDKKYVHNKADDIIDLSEDVVGEDFWLATWCNSTAFEGKQLEG 955
            RT  + K +        K+KK +  KA+ + ++ + +  ++F++ T C +   EG +LEG
Sbjct: 674  RTFGLFKKLFEEESGASKEKKQLVAKAETVDEVQKVLKRDNFFMTTICRNE--EGTRLEG 731

Query: 956  TRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWL 1015
            T + + K+ E G  F+I+TPCTP R+  FD E+  A +  +    + D    LD+V  + 
Sbjct: 732  TWLLIEKV-ELGSMFSIKTPCTPKRYKIFDVELKKALDKYYTVQHSDDQDKILDAVLRFC 790

Query: 1016 Y 1016
            Y
Sbjct: 791  Y 791


>gi|67480111|ref|XP_655416.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
 gi|56472551|gb|EAL50030.1| TPR repeat protein [Entamoeba histolytica HM-1:IMSS]
 gi|449707388|gb|EMD47059.1| tetratricopeptide repeatcontaining protein tpr [Entamoeba
           histolytica KU27]
          Length = 890

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 208/419 (49%), Gaps = 22/419 (5%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           +  I +D  +++G   VN GK   AI+ FDQ+LK  P      +GRG+A+A   +L+ A+
Sbjct: 218 TNDIELDREIAKGYLYVNTGKLKEAIAHFDQLLKNHPNVLAGYLGRGSAKAMLGDLQKAL 277

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           +DF  A++ +   G+A+KRRGQ + ALG++  A++D +KA+E  P   D   +RG     
Sbjct: 278 TDFNLAVKKDSKCGDAYKRRGQVKLALGQTQSALEDFNKAIELTPEEGDCYRQRGSAYHA 337

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
              F+ A ED+   +KL   + +    L L  + +G   ++   + +AI    +++E + 
Sbjct: 338 LGIFDKAAEDIKKSIKLIPGDATLLNELALCYNGMGLVDESINTYTRAINTKEDYVEPYI 397

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           HL Q Y+D+    +A + L++ + +      +Y++   +L   G+HK+A+  LS  L I 
Sbjct: 398 HLGQLYRDIGCYVRAKQLLEKAMKLAPTNHLSYYVMANVLASAGRHKEALPLLSRSLSIC 457

Query: 616 PS--NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTA 673
           P     +   L A+   A+G  R  +K      + + ++         ++Y  EIA Y A
Sbjct: 458 PPERTGDIHRLNATACLALGMNRSCLKSAKLGYEAKDNA---------SWYFGEIAKYQA 508

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVT 733
             I+  F  +D++    P +K  + KRL   N    V + PP    L+         +  
Sbjct: 509 MMIDKPFLEYDLEW-FPPQWKVNFAKRLPIGN----VKKYPPGNVPLQITTEDIDTKTTV 563

Query: 734 KQKTA--LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWK 790
           KQ+    LL+ A  +G K+QY+  GF  N RQ+   GL AI IAQ    + ++ Q  W+
Sbjct: 564 KQELVKELLIPAIKVGDKMQYNELGFGKNGRQYLACGLGAICIAQ----LLQTKQMGWR 618



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 107/181 (59%), Gaps = 11/181 (6%)

Query: 844  KMSWQDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYA 902
            +M W+++  + VK+RQ++EP D  +W++KL  ++F  GFGS+T +   Q +V RY+P + 
Sbjct: 614  QMGWREIAEILVKFRQVAEPADGAIWIDKLPRQQFEEGFGSNTTLKTAQTRVARYWPMFP 673

Query: 903  RTLDVAKTVM-------KDKKYVHNKADDIIDLSEDVVGEDFWLATWCNSTAFEGKQLEG 955
            RT  + K +        K+KK +  KA+ + ++ + +  ++F++ T C +   EG +LEG
Sbjct: 674  RTFGLFKKLFEEESGASKEKKQLVAKAETVDEVQKVLKRDNFFMTTICRNE--EGTRLEG 731

Query: 956  TRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWL 1015
            T + + K+ E G  F+I+TPCTP R+  FD E+  A +  +    ++D    LD+V  + 
Sbjct: 732  TWLLIEKV-ELGSMFSIKTPCTPKRYKIFDVELKKALDKYYTVQHSNDQDKILDAVLRFC 790

Query: 1016 Y 1016
            Y
Sbjct: 791  Y 791


>gi|218442020|ref|YP_002380349.1| hypothetical protein PCC7424_5131 [Cyanothece sp. PCC 7424]
 gi|218174748|gb|ACK73481.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 361

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 171/305 (56%), Gaps = 5/305 (1%)

Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
           LSF  + +K  S   + N +  + + S++   SV+   ++G+A++  G +++AI  F ++
Sbjct: 18  LSFGIEPVKAQS--PRSNPQPLLAQNSQN---SVEVLFNQGVAKIKAGNFSAAIKDFTEV 72

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           ++ +P  PEA   RG AR+   + + AI D+ +AI  NP + +A+  RG+AR+ LG++  
Sbjct: 73  IRLNPNLPEAYNNRGNARSKLGDNKGAIEDYNQAINLNPKSEQAYYNRGKARSELGDNKG 132

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AI+D ++AL   PNSA+  + RGI   + KD   A++DL+  ++L+ +   AY+  G   
Sbjct: 133 AIEDYNQALNLNPNSAEAYNNRGISRHELKDHVGAMQDLNQAIRLNPKMAEAYSNRGNVR 192

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
           ++IG+   A +    AI LD N  EA+ +    Y  + + +KA +   Q + +D +   A
Sbjct: 193 TTIGDTFGAFKDLNHAIGLDPNSAEAYNNRGVTYARVGDYQKAFQDFNQAIGLDPQLGLA 252

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y+ RG++    G H  AI+DL+  L  DP   +    R   +  +G +REAI+DYD A+ 
Sbjct: 253 YNNRGVMRREFGDHAGAIQDLNQALRFDPKLAKAYNNRGDTHRELGNHREAIQDYDQAVR 312

Query: 648 LELDS 652
           L  D+
Sbjct: 313 LIPDN 317



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 34/264 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+   G    AI  ++Q L  +P   EA   RG +R   ++   A+ D  +AI+ N
Sbjct: 119 NRGKARSELGDNKGAIEDYNQALNLNPNSAEAYNNRGISRHELKDHVGAMQDLNQAIRLN 178

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA+  RG  R  +G++  A +DL+ A+  +PNSA+  + RG+   +  D+  A +D
Sbjct: 179 PKMAEAYSNRGNVRTTIGDTFGAFKDLNHAIGLDPNSAEAYNNRGVTYARVGDYQKAFQD 238

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + LD +       LGLA ++ G  ++    H  AIQ                    
Sbjct: 239 FNQAIGLDPQ-------LGLAYNNRGVMRREFGDHAGAIQ-------------------- 271

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
                   L Q L  D + +KAY+ RG     LG H++AI+D    + + P N    Y R
Sbjct: 272 -------DLNQALRFDPKLAKAYNNRGDTHRELGNHREAIQDYDQAVRLIPDNPNIYYYR 324

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
                 +G+++ AI+DY  A+ ++
Sbjct: 325 GVVRTQLGDFQGAIEDYHQAVTID 348



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 95/176 (53%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           NS ++L  +G+   K  +F+AA++D +  ++L+     AY   G A S +G+ K A E +
Sbjct: 44  NSVEVLFNQGVAKIKAGNFSAAIKDFTEVIRLNPNLPEAYNNRGNARSKLGDNKGAIEDY 103

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI L+    +A+ +  +   +L +++ A+E   Q L ++   ++AY+ RG+  H L  
Sbjct: 104 NQAINLNPKSEQAYYNRGKARSELGDNKGAIEDYNQALNLNPNSAEAYNNRGISRHELKD 163

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           H  A++DL+  + ++P   E    R +    IG+   A KD + A+ L+ +S E +
Sbjct: 164 HVGAMQDLNQAIRLNPKMAEAYSNRGNVRTTIGDTFGAFKDLNHAIGLDPNSAEAY 219



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 24/197 (12%)

Query: 32  VMASAITARIELAKL-CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIR 90
           V+ +   A+I+      +++++++ IR L+  L ++Y      NR    S+L  +K  I 
Sbjct: 48  VLFNQGVAKIKAGNFSAAIKDFTEVIR-LNPNLPEAYN-----NRGNARSKLGDNKGAIE 101

Query: 91  DCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELL 150
           D ++A+ L+P   QAY  +G A S LG  + A+               D  Q L L    
Sbjct: 102 DYNQAINLNPKSEQAYYNRGKARSELGDNKGAIE--------------DYNQALNLNPNS 147

Query: 151 TAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHN--KSDICDSSSQSRDVS 208
             A  +R ++  +++ + + ++      +  N KM+E   N    ++ I D+    +D++
Sbjct: 148 AEAYNNRGIS-RHELKDHVGAMQDLNQAIRLNPKMAEAYSNRGNVRTTIGDTFGAFKDLN 206

Query: 209 ETCSKSSHDPDLCNGRS 225
                  +  +  N R 
Sbjct: 207 HAIGLDPNSAEAYNNRG 223


>gi|431895643|gb|ELK05069.1| Tetratricopeptide repeat protein 13 [Pteropus alecto]
          Length = 465

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/467 (26%), Positives = 221/467 (47%), Gaps = 40/467 (8%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q  + LG   EA+ DL++A++ +P SA +   RG + F  +D+  A ED    ++L++  
Sbjct: 3   QILSPLGRISEAVSDLTRAIQLQP-SARLYRHRGTLYFMSEDYATAHEDPQLSLELNRNQ 61

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A  Y GL     G  K+A E+  +A++   +F++A+  L Q Y++L N E A E  Q+
Sbjct: 62  PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 121

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +D+   +   LRG+LL+  G  + A++     L ++P N  C Y++   + A+G++ 
Sbjct: 122 ALLLDQNHVQTLQLRGVLLYHHGSLRGALRSFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 181

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           E +K     +  +    +K   + L   Y +E + Y  + +++    + +D D+   FK+
Sbjct: 182 EGVKAQTKVMLSDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYSVDVDLPGSFKD 241

Query: 696 YWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDC 754
            W K L    + E    QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ 
Sbjct: 242 RWAKNL--PFLLEDYKEQPGLQPHIK--DVSHQNFESYKPEVQELICVADRLGSLMQYET 297

Query: 755 PGFLSNRRQHRMAGLAAIEIAQKVSKIW---------RSLQAEW--------KYSNRSSS 797
           PGFL N+R HR  GLAA+E+   V + W         R+   +W        K+   S +
Sbjct: 298 PGFLPNKRVHRAMGLAALEVMHAVQRTWANAKVRTGGRTRPMQWRDMFDIAVKWRRPSCT 357

Query: 798 KNGKRARRKDRINIASQNRGGAGCSTS-SSSDTSSYGITEERSSGHPKMSWQ-------- 848
                A R   +   ++    A  +T+ +S   +S    + R    P +           
Sbjct: 358 VAPAEAFRARALEAEARVVHAALPATALASPQRNSRPAFQARRRLPPILQMLCLSRCRAL 417

Query: 849 ------DVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMI 888
                  V+  A   R++++P  PV+W++++ +   + GF +H  +I
Sbjct: 418 RHGQVVRVHLYAALSRRVADPDQPVLWLDQMPARSLSRGFTNHINLI 464



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 60/130 (46%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P A++ +G     +  L+ AI  F EA++      +A+K  GQA   LG    A +   K
Sbjct: 62  PIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQK 121

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           AL  + N    L  RG++ +       A+     C++L+  N+      GL+  ++G++ 
Sbjct: 122 ALLLDQNHVQTLQLRGVLLYHHGSLRGALRSFKRCLQLEPYNEVCQYMKGLSHVAMGQFY 181

Query: 535 KAEEAHLKAI 544
           +  +A  K +
Sbjct: 182 EGVKAQTKVM 191


>gi|354468845|ref|XP_003496861.1| PREDICTED: tetratricopeptide repeat protein 13-like [Cricetulus
           griseus]
          Length = 585

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 225/490 (45%), Gaps = 83/490 (16%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G+A    G ++ A EA  +A++   +F++A+  L Q Y++L N E A E  Q+ L +++ 
Sbjct: 16  GIAYGKKGLHE-AIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQN 74

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK-DY 642
             +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ E IK   
Sbjct: 75  HVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQT 134

Query: 643 DAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLH 702
              L+  L   +         Y +E + Y  + +++    ++ID D+   FK++W K L 
Sbjct: 135 KVMLNDPLPGQKASPEYLRVKYLREYSRYLHAHLDTPLTEYNIDTDLPGSFKDHWAKNL- 193

Query: 703 PKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFLSNR 761
              + +    QP L+  +K   +  Q+F   + +   ++ VAD +G  +QY+ PGFL N+
Sbjct: 194 -PFLIDGYEEQPGLQPHIK--DVLHQNFEGYRPEVQEMICVADRLGSLMQYETPGFLPNK 250

Query: 762 RQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGC 821
           R HR  GLAA+E+ Q V + W         +N     NG     K R+            
Sbjct: 251 RIHRAMGLAALEVMQAVHRTW---------TNSKVRMNG-----KTRL------------ 284

Query: 822 STSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSG 880
                                  M W+D++ +AVKWR+I++P  PV+W++++ +   + G
Sbjct: 285 -----------------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRG 321

Query: 881 FGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------------------NK 921
           F +H  +I GQ   +RY   + + L      +KD+  V+                   +K
Sbjct: 322 FNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVREALEKVHK 377

Query: 922 ADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTP 978
            +D++ + +       + F + T   S   +GK+ +G  IT+         F++ T  T 
Sbjct: 378 VEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTE 437

Query: 979 SRWDEFDAEM 988
            R   + AE+
Sbjct: 438 ERTQLYHAEI 447



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 1/138 (0%)

Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
           +L+E+P    A+ GRG A   ++ L  AI  F EA++      +A+K  GQA   LG   
Sbjct: 1   MLQEEPDLVSAIYGRGIAYG-KKGLHEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFE 59

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
            A +   KAL    N    L  RG++ +       A+++   C++L+  N+      GL+
Sbjct: 60  AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLS 119

Query: 527 LSSIGEYKKAEEAHLKAI 544
             ++G++ +  +A  K +
Sbjct: 120 HVAMGQFYEGIKAQTKVM 137


>gi|124249339|ref|NP_663582.2| tetratricopeptide repeat protein 13 precursor [Mus musculus]
 gi|74201264|dbj|BAE26094.1| unnamed protein product [Mus musculus]
          Length = 759

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 221/482 (45%), Gaps = 86/482 (17%)

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           ++A EA  +A++   +F++A+  L Q Y++L N + A E  Q+ L +++   +   LRG+
Sbjct: 156 QEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFDAATESFQKALLLNQNHVQTLQLRGM 215

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK-DYDAALDLELDS 652
           +L+  G  ++A+K+    L ++P N  C Y++   + A+G++ E IK      L+  L  
Sbjct: 216 MLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPG 275

Query: 653 MEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLH--PKNVCEKV 710
            +         Y +E + Y  + +++    ++ID D+   FK++W K L        E+ 
Sbjct: 276 QKASPEYLRVKYLREYSRYLHAHLDTPLTEYNIDSDLPGSFKDHWAKNLPFLIDGYEEQP 335

Query: 711 YRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGL 769
             QP +RD L       Q+F   K +   L+ VAD +G  +QY+ PGFL N+R HR  GL
Sbjct: 336 GLQPHIRDVL------HQNFEGYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGL 389

Query: 770 AAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDT 829
           AA+E+ Q V + W         +N     NG     K R+                    
Sbjct: 390 AALEVMQAVHRTW---------TNSKVRMNG-----KTRL-------------------- 415

Query: 830 SSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMI 888
                          + W+D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I
Sbjct: 416 ---------------LQWRDMFDIAVKWRRIADPDQPVLWLDQMPAPSLSRGFNNHINLI 460

Query: 889 LGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL------------SEDVVG-- 934
            GQ   +RY   + + L      +KD+  V++ A++   L             ED++   
Sbjct: 461 RGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIM 516

Query: 935 --------EDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDA 986
                   + F + T   S   +GK+ +G  IT+         F++ T  T  R   + A
Sbjct: 517 KQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHA 576

Query: 987 EM 988
           E+
Sbjct: 577 EI 578



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 4/132 (3%)

Query: 417 ALIGRG----TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
            L+G G      R F   L+ AI  F EA++      +A+K  GQA   LG    A +  
Sbjct: 137 VLVGSGLYDEAIRHFSTMLQEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFDAATESF 196

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  ++G+
Sbjct: 197 QKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQ 256

Query: 533 YKKAEEAHLKAI 544
           + +  +A  K +
Sbjct: 257 FYEGIKAQTKVM 268


>gi|51261325|gb|AAH79851.1| Ttc13 protein [Mus musculus]
          Length = 585

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 226/493 (45%), Gaps = 89/493 (18%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G+A    G ++ A EA  +A++   +F++A+  L Q Y++L N + A E  Q+ L +++ 
Sbjct: 16  GIAYGKKGLHE-AIEAFKEALKQKVDFIDAYKSLGQAYRELGNFDAATESFQKALLLNQN 74

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK-DY 642
             +   LRG++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ E IK   
Sbjct: 75  HVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQT 134

Query: 643 DAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLH 702
              L+  L   +         Y +E + Y  + +++    ++ID D+   FK++W K L 
Sbjct: 135 KVMLNDPLPGQKASPEYLRVKYLREYSRYLHAHLDTPLTEYNIDSDLPGSFKDHWAKNL- 193

Query: 703 PKNV---CEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFL 758
           P  +    E+   QP +RD L       Q+F   K +   L+ VAD +G  +QY+ PGFL
Sbjct: 194 PFLIDGYEEQPGLQPHIRDVL------HQNFEGYKPEVQELICVADRLGSLMQYETPGFL 247

Query: 759 SNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGG 818
            N+R HR  GLAA+E+ Q V + W         +N     NG     K R+         
Sbjct: 248 PNKRIHRAMGLAALEVMQAVHRTW---------TNSKVRMNG-----KTRL--------- 284

Query: 819 AGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEF 877
                                     + W+D++ +AVKWR+I++P  PV+W++++ +   
Sbjct: 285 --------------------------LQWRDMFDIAVKWRRIADPDQPVLWLDQMPAPSL 318

Query: 878 NSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVH------------------ 919
           + GF +H  +I GQ   +RY   + + L      +KD+  V+                  
Sbjct: 319 SRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVREALEK 374

Query: 920 -NKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTP 975
            +K +D++ + +       + F + T   S   +GK+ +G  IT+         F++ T 
Sbjct: 375 VHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQ 434

Query: 976 CTPSRWDEFDAEM 988
            T  R   + AE+
Sbjct: 435 TTEERTQLYHAEI 447



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 1/138 (0%)

Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
           +L+E+P    A+ GRG A   ++ L  AI  F EA++      +A+K  GQA   LG   
Sbjct: 1   MLQEEPDLVSAIYGRGIAYG-KKGLHEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFD 59

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
            A +   KAL    N    L  RG++ +       A+++   C++L+  N+      GL+
Sbjct: 60  AATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLS 119

Query: 527 LSSIGEYKKAEEAHLKAI 544
             ++G++ +  +A  K +
Sbjct: 120 HVAMGQFYEGIKAQTKVM 137


>gi|149043205|gb|EDL96737.1| tetratricopeptide repeat domain 13, isoform CRA_b [Rattus
           norvegicus]
          Length = 710

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 129/498 (25%), Positives = 228/498 (45%), Gaps = 77/498 (15%)

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           ++ A+   S  ++ + +  SA    G+A    G ++ A EA  +A++   +F++A+  L 
Sbjct: 144 YDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHE-AIEAFKEALKQKVDFIDAYKSLG 202

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           Q Y++L N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N
Sbjct: 203 QAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYN 262

Query: 619 IECLYLRASCYHAIGEYREAIK-DYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN 677
             C Y++   + A G++ E IK      L+  L   +         Y +E + Y  + ++
Sbjct: 263 EVCQYMKGLSHVATGQFYEGIKAQTKVMLNDPLPGQKASPEYLRVKYLREYSRYLHAHLD 322

Query: 678 SEFCWFDIDGDIDPLFKEYWCKRLH--PKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQ 735
           +    ++ID D+   FK++W K L        E+   QP +RD L       Q+F   K 
Sbjct: 323 TPLTEYNIDTDLPGSFKDHWAKNLPFLIDGYEEQPGLQPHIRDVL------HQNFEGYKP 376

Query: 736 KTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNR 794
           +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +N 
Sbjct: 377 EVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNS 427

Query: 795 SSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLA 854
               NG     K R+                                   M W+D++ +A
Sbjct: 428 KVRMNG-----KTRL-----------------------------------MQWRDMFDIA 447

Query: 855 VKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMK 913
           VKWR+I++P  PV+W++++ +   + GF +H  +I           N    L+V + + K
Sbjct: 448 VKWRRIADPDQPVLWLDQMPAPSLSRGFNNHINLIRAN--------NPKGLLEVREALEK 499

Query: 914 DKKYVHNKADDIIDLSEDV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDF 970
               VH K +D++ + +       + F + T   S   +GK+ +G  IT+         F
Sbjct: 500 ----VH-KVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILF 554

Query: 971 AIRTPCTPSRWDEFDAEM 988
           ++ T  T  R   + AE+
Sbjct: 555 SVETQTTEERTQLYHAEI 572



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 1/165 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S +  L+     V  G Y  AI  F  +L+E+P    A+ GRG A   ++ L  AI  F 
Sbjct: 127 STNEELAIAYVLVGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYG-KKGLHEAIEAFK 185

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           EA++      +A+K  GQA   LG    A +   KAL    N    L  RG++ +     
Sbjct: 186 EALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSL 245

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
             A+++   C++L+  N+      GL+  + G++ +  +A  K +
Sbjct: 246 QEALKNFKRCLQLEPYNEVCQYMKGLSHVATGQFYEGIKAQTKVM 290


>gi|282897129|ref|ZP_06305131.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281197781|gb|EFA72675.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 1279

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 160/685 (23%), Positives = 296/685 (43%), Gaps = 71/685 (10%)

Query: 3   KRKLLDSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL 62
           KR L  +RY L      I + ++++ ++   A    AR  +   C LRN+ +AI   +  
Sbjct: 312 KRGL--ARYDLGDKQGAIDDFNQVITINPHFADGYAARGLV--YCDLRNYQEAINDFNQT 367

Query: 63  L------AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSAL 116
           +      AQ+Y      NR    SQL   +  I D   +L L+P    AY  +G   S L
Sbjct: 368 IRINPNYAQAYH-----NRGVARSQLGDKQGAIDDYTHSLNLNPKFASAYYNRGIIRSDL 422

Query: 117 GRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSE 176
           G ++ A+               D  Q ++++     A  +R     Y + N   ++    
Sbjct: 423 GSQKAAMD--------------DYTQAIKIDPNYAQAYNNRGAIRTY-LGNYQGAIDDYI 467

Query: 177 SGLNANDKMSETSENHNKSDI--------CDSSSQSRDVSETCSKSSHDPDLCNGRSDEA 228
             L  +   +E   N   + I         D  +Q+ +++   +++ +   +      + 
Sbjct: 468 QALRVDSNYAEVYHNWGTTRINLEDNQGAIDDYTQALNINPNYAQAYYGRGIARFNLGDK 527

Query: 229 KGGSSVPVSKSGLHINGKLREVSENHN--GSSDGSKSTHASRDASEINRQSSDDFDICNG 286
           +G  ++      L+IN    +   N     +S G K          +N   + D      
Sbjct: 528 QG--AIDDYTQALNINPNYAQAYYNRGIARTSLGDKQGAVDDYTQALNINPNYDQAYYAW 585

Query: 287 PIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESY-----SKSSISDNKSS-- 339
            +  + + ++ G   N T            +LN +  + E+Y     ++S + DN+ +  
Sbjct: 586 GMVCSELGDKPGAVNNYTQ-----------ALNINPDDPETYIARGLTRSELGDNQGAID 634

Query: 340 DSTESRSKLSFKWDMLKETSNEAK-----RNKKFCVTRISKSKSISVDF---RLSRGIAQ 391
           D T++   L+   D     +N         + +  +   +++ +IS D+     +RGIA 
Sbjct: 635 DYTQA---LNLNPDYAYIYNNRGVVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAY 691

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
            + G Y SAI  + + ++  P   +  +GRGTA     + + AI+DF  A+  + S  +A
Sbjct: 692 YDLGNYQSAIDDYTRSIEIKPNCADTYVGRGTALYKLGDSQGAINDFHHALDIDASYADA 751

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +  RG  R  LG+   AI D + AL   PN A   + RGIV ++ +D   A+ED +  V 
Sbjct: 752 YNNRGIVRYELGDYQGAINDFNHALNINPNYAQAYNNRGIVRYELRDNQGAMEDFNHAVN 811

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           ++     AY   G+    +GE + A E   +AI +  N+ E++ +      +L N +KA+
Sbjct: 812 INSNYAQAYNNRGIVRICLGERQLAIEDFSQAIIIAYNYTESYINRGYARYELGNRQKAI 871

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           E   Q L I+  +++AY+ RG+    LG  + A  D S  + I+P   E    RA   + 
Sbjct: 872 EDFNQALNINPNYAQAYNNRGVAYTDLGDREWAKDDFSQAIQINPYYAEAYNNRAIVCYE 931

Query: 632 IGEYREAIKDYDAALDLELDSMEKF 656
           +G+++ AI+D++ AL++  + +E +
Sbjct: 932 LGDHQGAIEDFNQALNINSNYVEAY 956



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 7/284 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+A  + G    AI  F+Q L  +  + +A   RG AR    + + AI DF + I  N
Sbjct: 278 SRGVAHRDMGYLQKAIEDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAIDDFNQVITIN 337

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   + +  RG     L    EAI D ++ +   PN A   H RG+   +  D   A++D
Sbjct: 338 PHFADGYAARGLVYCDLRNYQEAINDFNQTIRINPNYAQAYHNRGVARSQLGDKQGAIDD 397

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + L+ +  SAY   G+  S +G  K A + + +AI++D N+ +A+ +       L 
Sbjct: 398 YTHSLNLNPKFASAYYNRGIIRSDLGSQKAAMDDYTQAIKIDPNYAQAYNNRGAIRTYLG 457

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N + A++   Q L +D  +++ YH  G     L  ++ AI D +  L I+P+  +  Y R
Sbjct: 458 NYQGAIDDYIQALRVDSNYAEVYHNWGTTRINLEDNQGAIDDYTQALNINPNYAQAYYGR 517

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
                 +G+ + AI DY  AL++  +  +       A+Y + IA
Sbjct: 518 GIARFNLGDKQGAIDDYTQALNINPNYAQ-------AYYNRGIA 554



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 149/321 (46%), Gaps = 12/321 (3%)

Query: 344 SRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISI 403
           +RS+L  K   + + ++    N KF                 +RGI + + G   +A+  
Sbjct: 384 ARSQLGDKQGAIDDYTHSLNLNPKFASAY------------YNRGIIRSDLGSQKAAMDD 431

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           + Q +K DP Y +A   RG  R +    + AI D+ +A++ + +  E +   G  R  L 
Sbjct: 432 YTQAIKIDPNYAQAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYAEVYHNWGTTRINLE 491

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
           ++  AI D ++AL   PN A   + RGI  F   D   A++D +  + ++     AY   
Sbjct: 492 DNQGAIDDYTQALNINPNYAQAYYGRGIARFNLGDKQGAIDDYTQALNINPNYAQAYYNR 551

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G+A +S+G+ + A + + +A+ ++ N+ +A+        +L +   A+    Q L I+  
Sbjct: 552 GIARTSLGDKQGAVDDYTQALNINPNYDQAYYAWGMVCSELGDKPGAVNNYTQALNINPD 611

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
             + Y  RGL    LG ++ AI D +  L ++P        R      I +Y+ AI DY 
Sbjct: 612 DPETYIARGLTRSELGDNQGAIDDYTQALNLNPDYAYIYNNRGVVRSDIADYQRAIDDYT 671

Query: 644 AALDLELDSMEKFVLQCLAFY 664
            AL++  D  + +  + +A+Y
Sbjct: 672 QALNISPDYADAYYNRGIAYY 692



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 161/318 (50%), Gaps = 21/318 (6%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+ + G    A+  + Q L  +P Y +A    G   +   +   A++++T+A+  N
Sbjct: 550 NRGIARTSLGDKQGAVDDYTQALNINPNYDQAYYAWGMVCSELGDKPGAVNNYTQALNIN 609

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E +  RG  R+ LG++  AI D ++AL   P+ A I + RG+V     D+  A++D
Sbjct: 610 PDDPETYIARGLTRSELGDNQGAIDDYTQALNLNPDYAYIYNNRGVVRSDIADYQRAIDD 669

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQDL 564
            +  + +  +   AY   G+A   +G Y+ A + + ++I++  N  + + G  T  Y+ L
Sbjct: 670 YTQALNISPDYADAYYNRGIAYYDLGNYQSAIDDYTRSIEIKPNCADTYVGRGTALYK-L 728

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            +S+ A+      L ID  ++ AY+ RG++ + LG ++ AI D +  L I+P+  +    
Sbjct: 729 GDSQGAINDFHHALDIDASYADAYNNRGIVRYELGDYQGAINDFNHALNINPNYAQAYNN 788

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIAL--------- 670
           R    + + + + A++D++ A+++  +  + +     V  CL   ++++A+         
Sbjct: 789 RGIVRYELRDNQGAMEDFNHAVNINSNYAQAYNNRGIVRICLG--ERQLAIEDFSQAIII 846

Query: 671 ---YTASKINSEFCWFDI 685
              YT S IN  +  +++
Sbjct: 847 AYNYTESYINRGYARYEL 864



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 153/317 (48%), Gaps = 8/317 (2%)

Query: 364 RNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           RN +  +   +++  I+ ++  +   RG+A+   G    AI  +   L  +P +  A   
Sbjct: 355 RNYQEAINDFNQTIRINPNYAQAYHNRGVARSQLGDKQGAIDDYTHSLNLNPKFASAYYN 414

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG  R+     +AA+ D+T+AI+ +P+  +A+  RG  R  LG    AI D  +AL  + 
Sbjct: 415 RGIIRSDLGSQKAAMDDYTQAIKIDPNYAQAYNNRGAIRTYLGNYQGAIDDYIQALRVDS 474

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A++ H  G      +D   A++D +  + ++     AY   G+A  ++G+ + A + +
Sbjct: 475 NYAEVYHNWGTTRINLEDNQGAIDDYTQALNINPNYAQAYYGRGIARFNLGDKQGAIDDY 534

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +A+ ++ N+ +A+ +       L + + A++   Q L I+  + +AY+  G++   LG 
Sbjct: 535 TQALNINPNYAQAYYNRGIARTSLGDKQGAVDDYTQALNINPNYDQAYYAWGMVCSELGD 594

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF---- 656
              A+ + +  L I+P + E    R      +G+ + AI DY  AL+L  D    +    
Sbjct: 595 KPGAVNNYTQALNINPDDPETYIARGLTRSELGDNQGAIDDYTQALNLNPDYAYIYNNRG 654

Query: 657 -VLQCLAFYQKEIALYT 672
            V   +A YQ+ I  YT
Sbjct: 655 VVRSDIADYQRAIDDYT 671



 Score =  116 bits (291), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 133/280 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ + +   Y  AI  + Q L   P Y +A   RG A       ++AI D+T +I+  
Sbjct: 652 NRGVVRSDIADYQRAIDDYTQALNISPDYADAYYNRGIAYYDLGNYQSAIDDYTRSIEIK 711

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  + +  RG A   LG+S  AI D   AL+ + + AD  + RGIV ++  D+  A+ D
Sbjct: 712 PNCADTYVGRGTALYKLGDSQGAINDFHHALDIDASYADAYNNRGIVRYELGDYQGAIND 771

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + ++     AY   G+    + + + A E    A+ ++ N+ +A+ +       L 
Sbjct: 772 FNHALNINPNYAQAYNNRGIVRYELRDNQGAMEDFNHAVNINSNYAQAYNNRGIVRICLG 831

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             + A+E   Q + I   ++++Y  RG   + LG  +KAI+D +  L I+P+  +    R
Sbjct: 832 ERQLAIEDFSQAIIIAYNYTESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNR 891

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
              Y  +G+   A  D+  A+ +     E +  + +  Y+
Sbjct: 892 GVAYTDLGDREWAKDDFSQAIQINPYYAEAYNNRAIVCYE 931



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 131/272 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RGIA+ + G    AI+ F Q +  +   P+  + RG AR    + + AI DF +A+  
Sbjct: 209 LCRGIARSDLGDNRGAINDFTQSISINSNLPQPYMERGIARTNLGDGQGAIDDFNQALDI 268

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A   RG A   +G   +AI+D ++ L       D   +RG+  +   D   A++
Sbjct: 269 NPNLALAAYSRGVAHRDMGYLQKAIEDFNQTLHLNSAFFDAYTKRGLARYDLGDKQGAID 328

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  + ++      Y   GL    +  Y++A     + I+++ N+ +A+ +       L
Sbjct: 329 DFNQVITINPHFADGYAARGLVYCDLRNYQEAINDFNQTIRINPNYAQAYHNRGVARSQL 388

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + + A++     L ++ +F+ AY+ RG++   LG  K A+ D +  + IDP+  +    
Sbjct: 389 GDKQGAIDDYTHSLNLNPKFASAYYNRGIIRSDLGSQKAAMDDYTQAIKIDPNYAQAYNN 448

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           R +    +G Y+ AI DY  AL ++ +  E +
Sbjct: 449 RGAIRTYLGNYQGAIDDYIQALRVDSNYAEVY 480



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 89/182 (48%), Gaps = 9/182 (4%)

Query: 508 ACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           A +++D E ++A+TYL  G+A S +G+ + A     ++I ++ N  + +        +L 
Sbjct: 195 AVLEIDLE-ENAHTYLCRGIARSDLGDNRGAINDFTQSISINSNLPQPYMERGIARTNLG 253

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A++   Q L I+   + A + RG+    +G  +KAI+D +  L ++ +  +    R
Sbjct: 254 DGQGAIDDFNQALDINPNLALAAYSRGVAHRDMGYLQKAIEDFNQTLHLNSAFFDAYTKR 313

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYTAS-KINSE 679
               + +G+ + AI D++  + +     + +  + L +     YQ+ I  +  + +IN  
Sbjct: 314 GLARYDLGDKQGAIDDFNQVITINPHFADGYAARGLVYCDLRNYQEAINDFNQTIRINPN 373

Query: 680 FC 681
           + 
Sbjct: 374 YA 375


>gi|149043204|gb|EDL96736.1| tetratricopeptide repeat domain 13, isoform CRA_a [Rattus
           norvegicus]
          Length = 688

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 213/463 (46%), Gaps = 76/463 (16%)

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           ++A EA  +A++   +F++A+  L Q Y++L N E A E  Q+ L +++   +   LRG+
Sbjct: 156 QEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGM 215

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK-DYDAALDLELDS 652
           +L+  G  ++A+K+    L ++P N  C Y++   + A G++ E IK      L+  L  
Sbjct: 216 MLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVATGQFYEGIKAQTKVMLNDPLPG 275

Query: 653 MEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLH--PKNVCEKV 710
            +         Y +E + Y  + +++    ++ID D+   FK++W K L        E+ 
Sbjct: 276 QKASPEYLRVKYLREYSRYLHAHLDTPLTEYNIDTDLPGSFKDHWAKNLPFLIDGYEEQP 335

Query: 711 YRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGL 769
             QP +RD L       Q+F   K +   L+ VAD +G  +QY+ PGFL N+R HR  GL
Sbjct: 336 GLQPHIRDVL------HQNFEGYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGL 389

Query: 770 AAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDT 829
           AA+E+ Q V + W         +N     NG     K R+                    
Sbjct: 390 AALEVMQAVQRTW---------TNSKVRMNG-----KTRL-------------------- 415

Query: 830 SSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMI 888
                          M W+D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I
Sbjct: 416 ---------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMPAPSLSRGFNNHINLI 460

Query: 889 LGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDLSEDV---VGEDFWLATWCNS 945
                      N    L+V + + K    VH K +D++ + +       + F + T   S
Sbjct: 461 RAN--------NPKGLLEVREALEK----VH-KVEDLLPIMKQFNTKTKDGFTVNTKVPS 507

Query: 946 TAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
              +GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 508 LKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 550



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)

Query: 417 ALIGRG----TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
            L+G G      R F   L+ AI  F EA++      +A+K  GQA   LG    A +  
Sbjct: 137 VLVGSGLYDEAIRHFSTMLQEAIEAFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESF 196

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            KAL    N    L  RG++ +       A+++   C++L+  N+      GL+  + G+
Sbjct: 197 QKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVATGQ 256

Query: 533 YKKAEEAHLKAI 544
           + +  +A  K +
Sbjct: 257 FYEGIKAQTKVM 268


>gi|254417224|ref|ZP_05030969.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196176030|gb|EDX71049.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 600

 Score =  150 bits (379), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 159/298 (53%), Gaps = 3/298 (1%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +   +++  I+ DF  +   RG+A+ +   Y  AI+ F+Q ++ +P Y  A   RG AR
Sbjct: 262 AIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNAR 321

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           +   + + AI+DF +AIQ NP    A+  RG AR+ LG+  EAI D ++A++  P+ A  
Sbjct: 322 SDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATA 381

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG+      D   A+ D +  ++++ +  +AY   GLA S++G+ + A   + +AIQ
Sbjct: 382 YYNRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYNQAIQ 441

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++ +   A+ +      DL + ++A+    Q + I+   + AY+ RG     LG ++ AI
Sbjct: 442 INPDLAAAYNNRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAI 501

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            D +  + I+P + +  Y R +    +G+Y+ AI DY+ A+ L  D    +  + LA+
Sbjct: 502 ADFTQAIKINPGDADAYYNRGNARSDLGDYQGAIADYNQAIKLNPDYAAAYGNRGLAY 559



 Score =  144 bits (363), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 158/302 (52%), Gaps = 6/302 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ +   Y  AI+ F+Q ++ +P +  A   RG AR+   + + AI+DF +AIQ N
Sbjct: 248 NRGAARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQIN 307

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG AR+ LG+   AI D ++A++  P+ A   + RG       D+  A+ D
Sbjct: 308 PDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIAD 367

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+ ++ +AY   GLA S +G+ + A   + +AIQ++ +   A+ +      +L 
Sbjct: 368 FAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNNRGLARSNLG 427

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + AL    Q + I+   + AY+ RGL    LG +++AI D +  + I+P + +  Y R
Sbjct: 428 DDQGALADYNQAIQINPDLAAAYNNRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNR 487

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC-----LAFYQKEIALYT-ASKINSE 679
            +    +G+Y+ AI D+  A+ +     + +  +      L  YQ  IA Y  A K+N +
Sbjct: 488 GNARSNLGDYQGAIADFTQAIKINPGDADAYYNRGNARSDLGDYQGAIADYNQAIKLNPD 547

Query: 680 FC 681
           + 
Sbjct: 548 YA 549



 Score =  144 bits (362), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 156/301 (51%), Gaps = 3/301 (0%)

Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N +  +   +++  I+ D+ ++   RG+A+ N G Y  AI+ + Q ++ +P    A   R
Sbjct: 88  NYQGAIADFNQAIKINPDYAIAYYNRGLARSNLGDYQGAIADYTQAIQLNPDDAIAYNNR 147

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G AR+   + E AI+DF +AIQ NP    A+  RG AR+ LG+   AI D ++A++  P+
Sbjct: 148 GLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPD 207

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            AD  + RG      +D+  A+ D +  ++L+ ++  AY+  G A S + +Y+ A     
Sbjct: 208 YADAYNNRGNARSNLEDYQGAIADYTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIADFN 267

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +AIQ++ +F  A+ +      DL + + A+    Q + I+  ++ AY+ RG     LG  
Sbjct: 268 QAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNARSDLGDD 327

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           + AI D +  + ++P      Y R +    +G+Y EAI D+  A+ L  D    +  + L
Sbjct: 328 QGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGL 387

Query: 662 A 662
           A
Sbjct: 388 A 388



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 145/277 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+ N G Y  AI+ F Q ++ +P    A   RG AR+   + + AI+D+T+AI+ N
Sbjct: 146 NRGLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDYQGAIADYTQAIKIN 205

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG AR+ L +   AI D ++A++  P+ A     RG      +D+  A+ D
Sbjct: 206 PDYADAYNNRGNARSNLEDYQGAIADYTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIAD 265

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++ +   AY   G+A S + +Y+ A     +AIQ++ ++  A+ +      DL 
Sbjct: 266 FNQAIQINPDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNARSDLG 325

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q + ++  F+ AY+ RG     LG +++AI D +  + ++P +    Y R
Sbjct: 326 DDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNR 385

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
                 +G+ + AI DY+ A+ +  D    +  + LA
Sbjct: 386 GLARSDLGDDQGAIADYNQAIQINPDLAAAYNNRGLA 422



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 157/300 (52%), Gaps = 6/300 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+ + G Y  AI+ + Q +K +P Y +A   RG AR+   + + AI+D+T+AIQ N
Sbjct: 180 NRGLARSDLGDYQGAIADYTQAIKINPDYADAYNNRGNARSNLEDYQGAIADYTQAIQLN 239

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG AR+ L +   AI D ++A++  P+ A   + RG+     +D+  A+ D
Sbjct: 240 PDDAKAYSNRGAARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLEDYQGAIAD 299

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++ +  +AY   G A S +G+ + A     +AIQL+ +F  A+ +      +L 
Sbjct: 300 FNQAIQINPDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPDFAYAYYNRGNARSNLG 359

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + E+A+    Q + ++   + AY+ RGL    LG  + AI D +  + I+P        R
Sbjct: 360 DYEEAIADFAQAIQLNPDDATAYYNRGLARSDLGDDQGAIADYNQAIQINPDLAAAYNNR 419

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT-ASKINSE 679
                 +G+ + A+ DY+ A+ +  D    +  + LA      YQ+ IA +  A KIN +
Sbjct: 420 GLARSNLGDDQGALADYNQAIQINPDLAAAYNNRGLARSDLGDYQEAIADFNQAIKINPD 479



 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 151/298 (50%), Gaps = 6/298 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ N   Y  AI+ + Q ++ +P   +A   RG AR+   + + AI+DF +AIQ N
Sbjct: 214 NRGNARSNLEDYQGAIADYTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIADFNQAIQIN 273

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG AR+ L +   AI D ++A++  P+ A+  + RG       D   A+ D
Sbjct: 274 PDFAYAYNNRGVARSDLEDYQGAIADFNQAIQINPDYANAYYNRGNARSDLGDDQGAIAD 333

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+ +   AY   G A S++G+Y++A     +AIQL+ +   A+ +      DL 
Sbjct: 334 FNQAIQLNPDFAYAYYNRGNARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLARSDLG 393

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q + I+   + AY+ RGL    LG  + A+ D +  + I+P        R
Sbjct: 394 DDQGAIADYNQAIQINPDLAAAYNNRGLARSNLGDDQGALADYNQAIQINPDLAAAYNNR 453

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC-----LAFYQKEIALYT-ASKIN 677
                 +G+Y+EAI D++ A+ +  D  + +  +      L  YQ  IA +T A KIN
Sbjct: 454 GLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAIADFTQAIKIN 511



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 138/292 (47%), Gaps = 34/292 (11%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G Y  AI+ ++Q L+  P   E    R  A       + AI+DF +AI+ NP    A+ 
Sbjct: 52  KGDYQGAIADYNQALQLSPNNAEVYYLRANAYYQLENYQGAIADFNQAIKINPDYAIAYY 111

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG AR+ LG+   AI D ++A++  P+ A   + RG+      D+  A+ D +  ++L+
Sbjct: 112 NRGLARSNLGDYQGAIADYTQAIQLNPDDAIAYNNRGLARSNLGDYEEAIADFAQAIQLN 171

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--------------GHLTQ 559
            ++ +AY   GLA S +G+Y+ A   + +AI+++ ++ +A+              G +  
Sbjct: 172 PDDATAYYNRGLARSDLGDYQGAIADYTQAIKINPDYADAYNNRGNARSNLEDYQGAIAD 231

Query: 560 FYQ--------------------DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
           + Q                    DL + + A+    Q + I+  F+ AY+ RG+    L 
Sbjct: 232 YTQAIQLNPDDAKAYSNRGAARSDLEDYQGAIADFNQAIQINPDFAYAYNNRGVARSDLE 291

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            ++ AI D +  + I+P      Y R +    +G+ + AI D++ A+ L  D
Sbjct: 292 DYQGAIADFNQAIQINPDYANAYYNRGNARSDLGDDQGAIADFNQAIQLNPD 343



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 136/274 (49%), Gaps = 10/274 (3%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P ALIG       Q +   A+++   A Q  P+  +      + +A  G+   AI D ++
Sbjct: 9   PAALIGTAIVL-VQPQFAVALTNLVVAQQ--PTV-QNLINSARIKAEKGDYQGAIADYNQ 64

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           AL+  PN+A++ + R    ++ +++  A+ D +  +K++ +   AY   GLA S++G+Y+
Sbjct: 65  ALQLSPNNAEVYYLRANAYYQLENYQGAIADFNQAIKINPDYAIAYYNRGLARSNLGDYQ 124

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
            A   + +AIQL+ +   A+ +      +L + E+A+    Q + ++   + AY+ RGL 
Sbjct: 125 GAIADYTQAIQLNPDDAIAYNNRGLARSNLGDYEEAIADFAQAIQLNPDDATAYYNRGLA 184

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
              LG ++ AI D +  + I+P   +    R +    + +Y+ AI DY  A+ L  D  +
Sbjct: 185 RSDLGDYQGAIADYTQAIKINPDYADAYNNRGNARSNLEDYQGAIADYTQAIQLNPDDAK 244

Query: 655 KFVLQCLAF-----YQKEIALYT-ASKINSEFCW 682
            +  +  A      YQ  IA +  A +IN +F +
Sbjct: 245 AYSNRGAARSDLEDYQGAIADFNQAIQINPDFAY 278



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 71/127 (55%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+ + G Y  AI+ F+Q +K +P   +A   RG AR+   + + AI+DFT+AI+ N
Sbjct: 452 NRGLARSDLGDYQEAIADFNQAIKINPDDADAYYNRGNARSNLGDYQGAIADFTQAIKIN 511

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG AR+ LG+   AI D ++A++  P+ A     RG+      D   A+ED
Sbjct: 512 PGDADAYYNRGNARSDLGDYQGAIADYNQAIKLNPDYAAAYGNRGLAYRDLGDKPKALED 571

Query: 506 LSACVKL 512
                 L
Sbjct: 572 FRQAATL 578



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 53/95 (55%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D   +RG A+ N G Y  AI+ F Q +K +P   +A   RG AR+   + + AI+D+ +
Sbjct: 481 ADAYYNRGNARSNLGDYQGAIADFTQAIKINPGDADAYYNRGNARSDLGDYQGAIADYNQ 540

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           AI+ NP    A+  RG A   LG+  +A++D  +A
Sbjct: 541 AIKLNPDYAAAYGNRGLAYRDLGDKPKALEDFRQA 575


>gi|260818525|ref|XP_002604433.1| hypothetical protein BRAFLDRAFT_79267 [Branchiostoma floridae]
 gi|229289760|gb|EEN60444.1| hypothetical protein BRAFLDRAFT_79267 [Branchiostoma floridae]
          Length = 868

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 167/729 (22%), Positives = 287/729 (39%), Gaps = 163/729 (22%)

Query: 331 SSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
           S +  N ++  T  R + S    ML+E +  A    K  V  +S   S  +D  ++ GI 
Sbjct: 102 SLLGKNGATQDTCQRDQESPAASMLREYA--AVLLDKGLVPLVSSGDS-QLDAEIAFGIV 158

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-----FQRELEAAISDFTEAIQSN 445
             N G    +I  F   LK+ P    A  GRG+A A     ++   E A++DFT+AI+ +
Sbjct: 159 LANTGSPDESIQHFSAFLKDHPDVIAAYHGRGSAYARKGLQYKINAELALADFTKAIELD 218

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               E+++RR +  + +G   +AI DL  A+  EP +A     RG +NF  ++     E+
Sbjct: 219 RKLAESYERRAEILSPIGRGRDAIVDLDIAINLEP-TARRFFRRGTLNFLREEAAKIFEN 277

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           +                                     I+ +  ++EA  +L Q Y++L 
Sbjct: 278 V-------------------------------------IKANPEYVEAIRNLGQVYRELG 300

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + EKA+E     L +D +  + Y  RG L +  G+   A+++    L ++P N  C Y+ 
Sbjct: 301 DYEKAMEQFNTALILDDKHVQGYQFRGSLYYHSGRPFDALRNFKKCLALEPHNEPCQYMT 360

Query: 626 ASCYHAIGEYREAI-------------------KDYDAALDLELDSMEKFVL---QCLAF 663
                AIG +   I                   ++   A  +   +M   V    +C   
Sbjct: 361 GLSNSAIGRFYHGIKAQTKVSLTGSDERTHTARREESPAGGMAWVAMAMIVARRPECPPV 420

Query: 664 YQK--------------------EIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRL-- 701
             +                    E + YT + +      F +D D++  FK+ W K L  
Sbjct: 421 PGRVSNTPDTPTLTRHVSVCVSPEYSRYTHAHLEVPAREFSLDADLNGDFKDRWAKNLIF 480

Query: 702 HPKNVCEKVYRQPPLRDSLKKGKLRRQDFS-VTKQKTALLLVADSIGKKIQYDCPGFLSN 760
             +N  E+   QP + D +        DFS  T +   ++  A S+G+ +Q+   G+L N
Sbjct: 481 TVENYTEQPGLQPQISDVVTP------DFSSYTPEVQRMVCRAYSLGQLMQFTVDGYLPN 534

Query: 761 RRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAG 820
            R H   GLAA+E+ Q       + QA WK      +  GK                   
Sbjct: 535 VRVHAAMGLAALEVMQ-------TAQAFWKAPKTFKTPMGK------------------- 568

Query: 821 CSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNS 879
                                  K  W+D++  AVKWR++ +P  PV+W++ + ++  ++
Sbjct: 569 -----------------------KFHWRDIFDTAVKWRRLIDPEQPVLWLDLMPAKSVDA 605

Query: 880 GFGSHTPMILGQAKVVRYFPNYARTLDVAKTVM---KDKKYVHNKAD-----------DI 925
           GF +   MI GQ   +RY      T  + K ++   +D  + + KA+           ++
Sbjct: 606 GFNNFMNMIRGQVTNIRYSGYLDTTFKLTKQMVMHYQDLPHPNLKAEISKTQNCEELLEV 665

Query: 926 IDLSEDVVGEDFWLATWCNSTAFE--GKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDE 983
           +  S       F + T   S   +   K  +G  +TL    E    F++ T  T +R  +
Sbjct: 666 MKKSGSSTQNGFMVGTHVPSLKDKKRNKNYDGLMLTLSGDTEGNILFSMDTATTKTRTSQ 725

Query: 984 FDAEMTMAW 992
           + +EM   W
Sbjct: 726 YHSEMEWIW 734


>gi|444727679|gb|ELW68159.1| Tetratricopeptide repeat protein 13, partial [Tupaia chinensis]
          Length = 676

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 176/357 (49%), Gaps = 56/357 (15%)

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           +A E+  +A++   +F++A+  L Q Y++L N E A E  Q+ L +++   +   LRG++
Sbjct: 33  EAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGVM 92

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           L+  G  ++A+K+    L ++P +  C Y++   + A+G++ E IK     +  +    +
Sbjct: 93  LYHHGSLQEALKNFKRCLQLEPYDEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQ 152

Query: 655 KFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQ 713
           K   + L   Y +E + Y  + +++    ++ID D+   FK++W K L    + E    Q
Sbjct: 153 KASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDTDLPGSFKDHWAKNL--PFLIEDYEEQ 210

Query: 714 PPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLAAI 772
           P L+  +K   +  QDF   K +   L+ VAD +G  +QY+ PGFL N+R HR  GLAA+
Sbjct: 211 PGLQPHIK--DVLHQDFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAAL 268

Query: 773 EIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSY 832
           E+ Q V + W         +N     NG     K R+                       
Sbjct: 269 EVMQAVQRTW---------ANSKVRMNG-----KTRL----------------------- 291

Query: 833 GITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMI 888
                       M W+D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I
Sbjct: 292 ------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLI 336



 Score = 47.4 bits (111), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 52/111 (46%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI  F EA++      +A+K  GQA   LG    A +   KAL    N    L  RG++ 
Sbjct: 34  AIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGVML 93

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
           +       A+++   C++L+  ++      GL+  ++G++ +  +A  K +
Sbjct: 94  YHHGSLQEALKNFKRCLQLEPYDEVCQYMKGLSHVAMGQFYEGIKAQTKVM 144


>gi|21740202|emb|CAD39113.1| hypothetical protein [Homo sapiens]
          Length = 529

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 203/448 (45%), Gaps = 81/448 (18%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N E A E  Q+ L +++   +   LRG++L+  G  ++A+K+    L ++P N  C Y+
Sbjct: 1   GNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYM 60

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKEIALYTASKINSEFCWF 683
           +   + A+G++ E IK     +  +    +K   + L   Y +E + Y  + +++    +
Sbjct: 61  KGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEY 120

Query: 684 DIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLV 742
           +ID D+   FK++W K L    + E    QP L+  +K   +  Q+F   K +   L+ V
Sbjct: 121 NIDVDLPGSFKDHWAKNL--PFLIEDYEEQPGLQPHIKD--VLHQNFESYKPEVQELICV 176

Query: 743 ADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKR 802
           AD +G  +QY+ PGFL N+R HR  GLAA+E+ Q V + W         +N     NG  
Sbjct: 177 ADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTW---------TNSKVRMNG-- 225

Query: 803 ARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPKMSWQDVYTLAVKWRQISE 862
              K R+                                   M W+D++ +AVKWR+I++
Sbjct: 226 ---KTRL-----------------------------------MQWRDMFDIAVKWRRIAD 247

Query: 863 PCDPVVWVNKL-SEEFNSGFGSHTPMILGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNK 921
           P  PV+W++++ +   + GF +H  +I GQ   +RY   + + L      +KD+  V++ 
Sbjct: 248 PDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILH----FIKDRILVYHG 303

Query: 922 ADDIIDL------------SEDVVG---------EDFWLATWCNSTAFEGKQLEGTRITL 960
           A++   L             ED++          + F + T   S   +GK+ +G  IT+
Sbjct: 304 ANNPKGLLEVREALEKVHKVEDLLPIMKFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITI 363

Query: 961 VKMGESGYDFAIRTPCTPSRWDEFDAEM 988
                    F++ T  T  R   + AE+
Sbjct: 364 TGDKVGNILFSVETQTTEERTQLYHAEI 391


>gi|434402457|ref|YP_007145342.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
 gi|428256712|gb|AFZ22662.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
          Length = 496

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 166/335 (49%), Gaps = 10/335 (2%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +T   ++ +I+ +F     +RG A+   G    AI+ +DQ +K +P +  A   RG AR
Sbjct: 116 AITDYDQAININPNFADAYYNRGNARAELGDMPGAITDYDQAIKINPNFAVAYYNRGNAR 175

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           A   +++ AI+DF +AI  NP+  EA+  RG  RA LG+   AI DL++A++  PN A  
Sbjct: 176 AKLGDMQGAITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKA 235

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG +  K  D   A+ DL+  +K++     AY   G A + +G+ + A     +AI+
Sbjct: 236 YYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIK 295

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
            + N    + +       L + + A+    Q + I+  ++ AY  RG +   LG  + AI
Sbjct: 296 TNPNDPLPYNNRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAI 355

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            D +  + I+P+  +  + R +  + +G+ + AI DY+ A+++  +  +       A++ 
Sbjct: 356 TDYNQAININPNYADAYFNRGNARYKLGDMQGAITDYNQAININPNFAD-------AYFN 408

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           +  A Y    +      ++   +I+P F + +  R
Sbjct: 409 RGNARYKLGDMQGAITDYNQAININPNFADAYLNR 443



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 150/297 (50%), Gaps = 3/297 (1%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +T   ++  I+ +F ++   RG A+   G    AI+ F+Q +  +P Y EA   RGT R
Sbjct: 150 AITDYDQAIKINPNFAVAYYNRGNARAKLGDMQGAITDFNQAININPNYAEAYTNRGTLR 209

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           A   +++ AI+D  +AI+ NP+  +A+  RG  R  LG+   AI DL++A++  PN  + 
Sbjct: 210 AELGDMQGAITDLNQAIKINPNFAKAYYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEA 269

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
              RG    +  D   A+ D +  +K +  +   Y     A + +G+ + A     +AI 
Sbjct: 270 YGNRGNARAELGDMQTAITDFNQAIKTNPNDPLPYNNRANARAKLGDMQGAITDFNQAIN 329

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++ N+  A+ +       L + + A+    Q + I+  ++ AY  RG   + LG  + AI
Sbjct: 330 INPNYANAYKNRGFVRAKLGDMQGAITDYNQAININPNYADAYFNRGNARYKLGDMQGAI 389

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            D +  + I+P+  +  + R +  + +G+ + AI DY+ A+++  +  + ++ + +A
Sbjct: 390 TDYNQAININPNFADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYLNRGIA 446



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 155/320 (48%), Gaps = 8/320 (2%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           + +  +   D  L+RG A+   G   + I+ +DQ +K +P   +A   RG ARA   ++ 
Sbjct: 55  VKREGNTLTDTLLNRGNARDKLGNKQAQITDYDQAIKTNPNDAQAYYNRGNARAELGDMP 114

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI+D+ +AI  NP+  +A+  RG ARA LG+   AI D  +A++  PN A   + RG  
Sbjct: 115 GAITDYDQAININPNFADAYYNRGNARAELGDMPGAITDYDQAIKINPNFAVAYYNRGNA 174

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             K  D   A+ D +  + ++     AYT  G   + +G+ + A     +AI+++ NF +
Sbjct: 175 RAKLGDMQGAITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAK 234

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A+ +       L + + A+  L Q + I+  +++AY  RG     LG  + AI D +  +
Sbjct: 235 AYYNRGTLRGKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAI 294

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK-----FVLQCLAFYQKE 667
             +P++      RA+    +G+ + AI D++ A+++  +         FV   L   Q  
Sbjct: 295 KTNPNDPLPYNNRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGA 354

Query: 668 IALYT-ASKINSEF--CWFD 684
           I  Y  A  IN  +   +F+
Sbjct: 355 ITDYNQAININPNYADAYFN 374



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 141/283 (49%), Gaps = 3/283 (1%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +T  +++ +I+ ++     +RG  +   G    AI+  +Q +K +P + +A   RGT R
Sbjct: 184 AITDFNQAININPNYAEAYTNRGTLRAELGDMQGAITDLNQAIKINPNFAKAYYNRGTLR 243

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
               +++ AI+D  +AI+ NP+  EA+  RG ARA LG+   AI D ++A++  PN    
Sbjct: 244 GKLGDMQGAITDLNQAIKINPNYTEAYGNRGNARAELGDMQTAITDFNQAIKTNPNDPLP 303

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + R     K  D   A+ D +  + ++    +AY   G   + +G+ + A   + +AI 
Sbjct: 304 YNNRANARAKLGDMQGAITDFNQAININPNYANAYKNRGFVRAKLGDMQGAITDYNQAIN 363

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++ N+ +A+ +       L + + A+    Q + I+  F+ AY  RG   + LG  + AI
Sbjct: 364 INPNYADAYFNRGNARYKLGDMQGAITDYNQAININPNFADAYFNRGNARYKLGDMQGAI 423

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            D +  + I+P+  +    R     A+G+ + AI D   A+DL
Sbjct: 424 TDYNQAININPNFADAYLNRGIASLALGDKQGAIADTQQAVDL 466


>gi|291569240|dbj|BAI91512.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 1337

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 159/340 (46%), Gaps = 10/340 (2%)

Query: 364 RNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           R+ +  +  + K+     D+    L RG A  N G+Y  AIS  DQ +K  P Y EA   
Sbjct: 157 RDWRGAIFSLEKAIEFKPDYHEAWLVRGSALGNLGEYEKAISSCDQAIKFKPDYHEAWAN 216

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG A ++  E E AIS   +AI+  P   EAW  RG A   LGE  +AI    +A++F+P
Sbjct: 217 RGVALSYLGEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAISSYDQAIKFKP 276

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           +  +  + RG       ++  A+      +K   +   A+   G+ALS +GEY+KA  ++
Sbjct: 277 DLHEAWNNRGNALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAISSY 336

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI+   +  EAW +      +L   EKA+    Q +     + +A++ RGL L  LG+
Sbjct: 337 DQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLGE 396

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
           ++KAI      +   P   E  + R    + +GEY +AI  YD A+  + D  E      
Sbjct: 397 YEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKPDYHE------ 450

Query: 661 LAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            A++ + +AL    +       +D    I P   E W  R
Sbjct: 451 -AWFVRGVALSYLGEHEKAISSYDQAIKIKPDLHEAWSNR 489



 Score =  147 bits (370), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 146/292 (50%), Gaps = 5/292 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A  N G+Y  AIS +DQ +K  P   EA   RG A A   E E AIS   +AI+ 
Sbjct: 249 LVRGSALGNLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSCDQAIKF 308

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   EAW  RG A + LGE  +AI    +A++F+P+  +  + RG       ++  A+ 
Sbjct: 309 KPDYHEAWLVRGVALSYLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAIS 368

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +K   +   A+   GLAL ++GEY+KA  ++ +AI+   ++ EAW +      DL
Sbjct: 369 SYDQAIKFKPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDL 428

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              EKA+    Q +     + +A+ +RG+ L  LG+H+KAI      + I P   E    
Sbjct: 429 GEYEKAISSYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISSYDQAIKIKPDLHEAWSN 488

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
           R S    +GEY +AI  YD A+  + D  E +  + LA      Y+K I+ Y
Sbjct: 489 RGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSY 540



 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 134/267 (50%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+A  + G+Y  AIS +DQ +K  P Y EA   RG A ++  E E AIS + +AI+ 
Sbjct: 419 FNRGLALYDLGEYEKAISSYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISSYDQAIKI 478

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   EAW  RG A + LGE  +AI    +A++F+P+  +    RG+      ++  A+ 
Sbjct: 479 KPDLHEAWSNRGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAIS 538

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +K   +   A++  G ALS +GEY+KA  ++ +AI+   +  +AW +       L
Sbjct: 539 SYDQAIKFKPDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYL 598

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              EKA+    Q +     F +A+  RGL L  LG+++KAI      +   P   E    
Sbjct: 599 GEYEKAISSYDQAIKFKPDFHEAWSNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSN 658

Query: 625 RASCYHAIGEYREAIKDYDAALDLELD 651
           R      +GEY +AI  YD A+  + D
Sbjct: 659 RGGALSHLGEYEKAISSYDQAIKFKPD 685



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 146/301 (48%), Gaps = 6/301 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N G+Y  AIS +DQ +K  P Y EA   RG A     E E AIS + +AI+  
Sbjct: 386 NRGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFK 445

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A + LGE  +AI    +A++ +P+  +    RG       ++  A+  
Sbjct: 446 PDYHEAWFVRGVALSYLGEHEKAISSYDQAIKIKPDLHEAWSNRGSALSHLGEYEKAISS 505

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K   ++  A+   GLALS +GEY+KA  ++ +AI+   ++ EAW +      DL 
Sbjct: 506 YDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSDLG 565

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             EKA+    Q +       +A+  RG+ L  LG+++KAI      +   P   E    R
Sbjct: 566 EYEKAISSYDQAIKFKPDDHQAWSNRGVALSYLGEYEKAISSYDQAIKFKPDFHEAWSNR 625

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKINSE 679
                 +GEY +AI  YD A+  + D  E +      L  L  Y+K I+ Y  A K   +
Sbjct: 626 GLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSHLGEYEKAISSYDQAIKFKPD 685

Query: 680 F 680
           F
Sbjct: 686 F 686



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 145/302 (48%), Gaps = 6/302 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG+A    G+Y  AIS +DQ +K  P   EA   RG A A   E E AIS + +AI+ 
Sbjct: 317 LVRGVALSYLGEYEKAISSYDQAIKFKPDLHEAWNNRGNALANLGEYEKAISSYDQAIKF 376

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   EAW  RG A   LGE  +AI    +A++F+P+  +    RG+  +   ++  A+ 
Sbjct: 377 KPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFKPDYHEAWFNRGLALYDLGEYEKAIS 436

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +K   +   A+   G+ALS +GE++KA  ++ +AI++  +  EAW +       L
Sbjct: 437 SYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISSYDQAIKIKPDLHEAWSNRGSALSHL 496

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              EKA+    Q +       +A+  RGL L  LG+++KAI      +   P   E    
Sbjct: 497 GEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSN 556

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKINS 678
           R      +GEY +AI  YD A+  + D  + +      L  L  Y+K I+ Y  A K   
Sbjct: 557 RGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYLGEYEKAISSYDQAIKFKP 616

Query: 679 EF 680
           +F
Sbjct: 617 DF 618



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 140/291 (48%), Gaps = 5/291 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G+Y  AIS +DQ +K  P Y EA   RG A     E E AIS + +AI+  
Sbjct: 352 NRGNALANLGEYEKAISSYDQAIKFKPDYHEAWYNRGLALGNLGEYEKAISSYDQAIKFK 411

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LGE  +AI    +A++F+P+  +    RG+      +   A+  
Sbjct: 412 PDYHEAWFNRGLALYDLGEYEKAISSYDQAIKFKPDYHEAWFVRGVALSYLGEHEKAISS 471

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+  +   A++  G ALS +GEY+KA  ++ +AI+   +  EAW +       L 
Sbjct: 472 YDQAIKIKPDLHEAWSNRGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLG 531

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             EKA+    Q +     + +A+  RG  L  LG+++KAI      +   P + +    R
Sbjct: 532 EYEKAISSYDQAIKFKPDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNR 591

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
                 +GEY +AI  YD A+  + D  E +      L  L  Y+K I+ Y
Sbjct: 592 GVALSYLGEYEKAISSYDQAIKFKPDFHEAWSNRGLALSYLGEYEKAISSY 642



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 106/207 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  + G+Y  AIS +DQ +K  P   EA   RG A ++  E E AIS + +AI+  
Sbjct: 488 NRGSALSHLGEYEKAISSYDQAIKFKPDDHEAWFNRGLALSYLGEYEKAISSYDQAIKFK 547

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A + LGE  +AI    +A++F+P+       RG+      ++  A+  
Sbjct: 548 PDYHEAWSNRGGALSDLGEYEKAISSYDQAIKFKPDDHQAWSNRGVALSYLGEYEKAISS 607

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K   +   A++  GLALS +GEY+KA  ++ +AI+   ++ EAW +       L 
Sbjct: 608 YDQAIKFKPDFHEAWSNRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSHLG 667

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRG 592
             EKA+    Q +     F +A+  RG
Sbjct: 668 EYEKAISSYDQAIKFKPDFHQAWSNRG 694



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 42/75 (56%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A    G+Y  AIS +DQ +K  P Y EA   RG A +   E E AIS + +AI+  
Sbjct: 624 NRGLALSYLGEYEKAISSYDQAIKFKPDYHEAWSNRGGALSHLGEYEKAISSYDQAIKFK 683

Query: 446 PSAGEAWKRRGQARA 460
           P   +AW  RG A A
Sbjct: 684 PDFHQAWSNRGNAAA 698



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 7/131 (5%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
           L +  K I   D+ ++    +  A   R   + L +L  + KAI   D  +    ++ + 
Sbjct: 224 LGEYEKAISSCDQAIKFKPDLHEAWLVRG--SALGNLGEYEKAISSYDQAIKFKPDLHEA 281

Query: 73  CN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
            N R    + L  ++  I  CD+A++  P   +A++++G A S LG  E+A+S     Y+
Sbjct: 282 WNNRGNALANLGEYEKAISSCDQAIKFKPDYHEAWLVRGVALSYLGEYEKAIS----SYD 337

Query: 132 HALHQSADLKQ 142
            A+    DL +
Sbjct: 338 QAIKFKPDLHE 348



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
            NR    S L  ++  I  CD+A++  P L +A++++G A   LG  E+A+S     Y+ 
Sbjct: 215 ANRGVALSYLGEYEKAISSCDQAIKFKPDLHEAWLVRGSALGNLGEYEKAIS----SYDQ 270

Query: 133 ALHQSADLKQ 142
           A+    DL +
Sbjct: 271 AIKFKPDLHE 280


>gi|268325019|emb|CBH38607.1| conserved hypothetical protein, containing tetratricopeptide
           repeats [uncultured archaeon]
          Length = 425

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 150/278 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  +  +Y  AI  F++ ++ DP Y  A   RGTA +  ++ E AI DF + I+  
Sbjct: 138 NRGTAYSDLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELI 197

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG     L +   AI+D +K +E +PNSA   + RG+     K +  A+ED
Sbjct: 198 PDYPFAYSNRGLTYDNLKQYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIED 257

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L   +  AY   GL  +++ +Y++A E   K I+LD N   A+ +    Y+ L 
Sbjct: 258 FNKTIELIPNHTFAYNNRGLTYNNLKQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLE 317

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+E   + + +D  ++ +Y+ RGL    L Q+++AI+D +  + +DP++      R
Sbjct: 318 EYERAIEDFNKTIELDSNYAGSYYNRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNR 377

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            + +  +G+Y  AI+DY+ A++L+ +  + +  + LA 
Sbjct: 378 GNAFKDLGQYERAIEDYNKAIELDPNDTDAYENRELAL 415



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 145/281 (51%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  ++ +    S     +RG+      +Y  AI  F++ ++  P +  A I RG A    
Sbjct: 53  CFDKVIELNPNSAGSYYNRGLVYKILKQYERAIEDFNKTIELIPTFAGAYINRGDAYKNL 112

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++ E AI DF + I+ +P+   A+  RG A + L +   AI+D +K +E +PN A   + 
Sbjct: 113 KQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELDPNYALAYNN 172

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG      K +  A+ED +  ++L  +   AY+  GL   ++ +Y++A E   K I+LD 
Sbjct: 173 RGTAYSDLKQYERAIEDFNKTIELIPDYPFAYSNRGLTYDNLKQYERAIEDFNKTIELDP 232

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N   A+ +    Y +L   E+A+E   + + +    + AY+ RGL  + L Q+++AI+D 
Sbjct: 233 NSAAAYNNRGLTYDNLKQYERAIEDFNKTIELIPNHTFAYNNRGLTYNNLKQYERAIEDF 292

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +  + +DP++      R + Y  + EY  AI+D++  ++L+
Sbjct: 293 NKTIELDPNSAAAYNNRGNAYRKLEEYERAIEDFNKTIELD 333



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 137/267 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++ I     G+Y  AI  FD++++ +P    +   RG      ++ E AI DF + I+  
Sbjct: 36  NKAIGFAMSGEYKKAIECFDKVIELNPNSAGSYYNRGLVYKILKQYERAIEDFNKTIELI 95

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG A   L +   AI+D +K +E +PN A   + RG      K +  A+ED
Sbjct: 96  PTFAGAYINRGDAYKNLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIED 155

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD     AY   G A S + +Y++A E   K I+L  ++  A+ +    Y +L 
Sbjct: 156 FNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELIPDYPFAYSNRGLTYDNLK 215

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+E   + + +D   + AY+ RGL    L Q+++AI+D +  + + P++      R
Sbjct: 216 QYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIEDFNKTIELIPNHTFAYNNR 275

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDS 652
              Y+ + +Y  AI+D++  ++L+ +S
Sbjct: 276 GLTYNNLKQYERAIEDFNKTIELDPNS 302



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 1/222 (0%)

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I S  +AGE W  +    A  GE  +AI+   K +E  PNSA   + RG+V    K +  
Sbjct: 25  IVSAETAGE-WHNKAIGFAMSGEYKKAIECFDKVIELNPNSAGSYYNRGLVYKILKQYER 83

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ED +  ++L      AY   G A  ++ +Y++A E   K I+LD N+  A+ +    Y
Sbjct: 84  AIEDFNKTIELIPTFAGAYINRGDAYKNLKQYERAIEDFNKTIELDPNYALAYNNRGTAY 143

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            DL   E+A+E   + + +D  ++ AY+ RG     L Q+++AI+D +  + + P     
Sbjct: 144 SDLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDFNKTIELIPDYPFA 203

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
              R   Y  + +Y  AI+D++  ++L+ +S   +  + L +
Sbjct: 204 YSNRGLTYDNLKQYERAIEDFNKTIELDPNSAAAYNNRGLTY 245



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 107/217 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   N  +Y  AI  F++ ++ DP    A   RG      ++ E AI DF + I+  
Sbjct: 206 NRGLTYDNLKQYERAIEDFNKTIELDPNSAAAYNNRGLTYDNLKQYERAIEDFNKTIELI 265

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG     L +   AI+D +K +E +PNSA   + RG    K +++  A+ED
Sbjct: 266 PNHTFAYNNRGLTYNNLKQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERAIED 325

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD     +Y   GL    + +Y++A E   K I+LD N    + +    ++DL 
Sbjct: 326 FNKTIELDSNYAGSYYNRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLG 385

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
             E+A+E   + + +D   + AY  R L L  L + +
Sbjct: 386 QYERAIEDYNKAIELDPNDTDAYENRELALSKLKEQE 422



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 11/124 (8%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSY 67
           L +  + I + ++ + +D   A+A   R    +       ++ +++K I  LDS  A SY
Sbjct: 282 LKQYERAIEDFNKTIELDPNSAAAYNNRGNAYRKLEEYERAIEDFNKTIE-LDSNYAGSY 340

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
                 NR   Y  L+ ++  I D +K ++LDP     Y  +G AF  LG+ E A+  + 
Sbjct: 341 -----YNRGLTYDDLKQYERAIEDFNKTIELDPNSAVIYTNRGNAFKDLGQYERAIEDYN 395

Query: 128 KGYE 131
           K  E
Sbjct: 396 KAIE 399



 Score = 43.9 bits (102), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 13/125 (10%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIR------ILDSLLAQS 66
           L +  + I + ++ + +    A A   R +  K  +L+ + +AI        LD   A +
Sbjct: 78  LKQYERAIEDFNKTIELIPTFAGAYINRGDAYK--NLKQYERAIEDFNKTIELDPNYALA 135

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
           Y      NR   YS L+ ++  I D +K ++LDP    AY  +G A+S L + E A+  +
Sbjct: 136 YN-----NRGTAYSDLKQYERAIEDFNKTIELDPNYALAYNNRGTAYSDLKQYERAIEDF 190

Query: 127 EKGYE 131
            K  E
Sbjct: 191 NKTIE 195


>gi|166368546|ref|YP_001660819.1| hypothetical protein MAE_58050 [Microcystis aeruginosa NIES-843]
 gi|166090919|dbj|BAG05627.1| tetratricopeptide TPR_2 [Microcystis aeruginosa NIES-843]
          Length = 741

 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 158/329 (48%), Gaps = 7/329 (2%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R  + K    D   +RG+A  N G++  AI+ +D+ L+  P Y EA   RG A      L
Sbjct: 163 RALEFKPDDPDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRL 222

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI+ +  A++  P   +AW  RG A A LG   EAI    +ALEF+P+  D  + RGI
Sbjct: 223 EEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGI 282

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                  F  A+      ++   ++  A+ Y G+AL ++G +++A  ++ KA++   ++ 
Sbjct: 283 ALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYH 342

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           EAW +     ++L   E+A+    + L I     +A++ RG+ L  LG+ ++AI      
Sbjct: 343 EAWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRA 402

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           L I P   E  Y R      +G + EAI  YD AL+++ D  E       A+Y + +AL 
Sbjct: 403 LEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHE-------AWYNRGVALG 455

Query: 672 TASKINSEFCWFDIDGDIDPLFKEYWCKR 700
              +       +D   +I P   E W  R
Sbjct: 456 NLGRFEEAIASYDRALEIKPDKHEAWYNR 484



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 157/335 (46%), Gaps = 10/335 (2%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    ++  I  D+     +RG+A  N G++  AI+ +D+ L+  P  P+A   RG A 
Sbjct: 123 AIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGVAL 182

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                 E AI+ + +A++  P   EAW  RG A   LG   EAI    +ALEF+P+  D 
Sbjct: 183 GNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWDRALEFKPDDHDA 242

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RGI       F  A+      ++   ++  A+ Y G+AL+++G +++A  +  +A++
Sbjct: 243 WNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALE 302

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
              +  +AW +      +L   E+A+    + L     + +A++ RG+ L  LG+ ++AI
Sbjct: 303 FKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAI 362

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                 L I P   E  Y R      +G + EAI  YD AL+++ D  E       A+Y 
Sbjct: 363 ASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHE-------AWYN 415

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           + +AL    +       +D   +I P   E W  R
Sbjct: 416 RGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNR 450



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 144/315 (45%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G++  AI+ +D+ L+  P Y EA   RG A       E AI+ +  A++  
Sbjct: 109 NRGNALYNLGRFEQAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFK 168

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   LG   +AI    KALEF+P+  +  + RGI          A+  
Sbjct: 169 PDDPDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIAS 228

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++   ++  A+ Y G+AL+++G +++A  +  +A++   +  +AW +      +L 
Sbjct: 229 WDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLG 288

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L        A++ RG+ L  LG+ ++AI      L   P   E  Y R
Sbjct: 289 RFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNR 348

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                 +G   EAI  +D AL+++ D  E       A+Y + +AL    +       +D 
Sbjct: 349 GIALKNLGRLEEAIASWDRALEIKPDKHE-------AWYNRGVALGNLGRFEEAIASYDR 401

Query: 686 DGDIDPLFKEYWCKR 700
             +I P   E W  R
Sbjct: 402 ALEIKPDKHEAWYNR 416



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 148/314 (47%), Gaps = 8/314 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA  N G++  AI+ +D+ L+  P Y EA   RG A      LE AI+ +  A++  P
Sbjct: 314 RGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASWDRALEIKP 373

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EAW  RG A   LG   EAI    +ALE +P+  +  + RG+       F  A+   
Sbjct: 374 DKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASY 433

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +++  +   A+   G+AL ++G +++A  ++ +A+++  +  EAW +      +L  
Sbjct: 434 DRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGR 493

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+    + L        A++ RG+ L  LG+ ++AI      L I P   E  Y R 
Sbjct: 494 LEEAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRG 553

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTAS---KINS 678
              + +G   EAI  YD AL+ + D  + +      L  L  +++ IA Y  +   K + 
Sbjct: 554 VALYNLGRLEEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEFKPDD 613

Query: 679 EFCWFDIDGDIDPL 692
              W++    +D L
Sbjct: 614 PDAWYNRGNALDDL 627



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 149/314 (47%), Gaps = 7/314 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA  N G++  AI+ +D+ L+  P   +A   RG A       E AI+ + +A++  P
Sbjct: 280 RGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKP 339

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EAW  RG A   LG   EAI    +ALE +P+  +  + RG+       F  A+   
Sbjct: 340 DYHEAWYNRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASY 399

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +++  +   A+   G+AL ++G +++A  ++ +A+++  +  EAW +      +L  
Sbjct: 400 DRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGR 459

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+    + L I     +A++ RG+ L  LG+ ++AI      L   P + +  Y R 
Sbjct: 460 FEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAIASYDRALEFKPDDPDAWYNRG 519

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
                +G + EAI  YD AL+++ D  E       A+Y + +ALY   ++      +D  
Sbjct: 520 VALGNLGRFEEAIASYDRALEIKPDKHE-------AWYNRGVALYNLGRLEEAIASYDRA 572

Query: 687 GDIDPLFKEYWCKR 700
            +  P   + W  R
Sbjct: 573 LEFKPDDPDAWNNR 586



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 149/335 (44%), Gaps = 10/335 (2%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    ++  I  D+     +RG+A  N G++  AI+ +D+ L+  P  P+A   RG A 
Sbjct: 55  AIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEIKPDDPDAWNNRGNAL 114

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                 E AI+ +  A++  P   EAW  RG A   LG   +AI    +ALEF+P+  D 
Sbjct: 115 YNLGRFEQAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFKPDDPDA 174

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG+       F  A+      ++   +   A+   G+AL ++G  ++A  +  +A++
Sbjct: 175 WYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWDRALE 234

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
              +  +AW +      +L   E+A+    + L        A++ RG+ L  LG+ ++AI
Sbjct: 235 FKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAI 294

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                 L   P + +    R      +G + EAI  YD AL+ + D  E       A+Y 
Sbjct: 295 ASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHE-------AWYN 347

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           + IAL    ++      +D   +I P   E W  R
Sbjct: 348 RGIALKNLGRLEEAIASWDRALEIKPDKHEAWYNR 382



 Score =  119 bits (298), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 146/314 (46%), Gaps = 7/314 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA  N G++  AI+ +D+ L+  P   +A   RG A A     E AI+ +  A++  P
Sbjct: 246 RGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKP 305

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG A   LG   EAI    KALEF+P+  +  + RGI          A+   
Sbjct: 306 DDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHEAWYNRGIALKNLGRLEEAIASW 365

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +++  +   A+   G+AL ++G +++A  ++ +A+++  +  EAW +      +L  
Sbjct: 366 DRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGR 425

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+    + L I     +A++ RG+ L  LG+ ++AI      L I P   E  Y R 
Sbjct: 426 FEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRG 485

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
                +G   EAI  YD AL+ + D  +       A+Y + +AL    +       +D  
Sbjct: 486 VALGNLGRLEEAIASYDRALEFKPDDPD-------AWYNRGVALGNLGRFEEAIASYDRA 538

Query: 687 GDIDPLFKEYWCKR 700
            +I P   E W  R
Sbjct: 539 LEIKPDKHEAWYNR 552



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 141/299 (47%), Gaps = 6/299 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N G++  AI+ +D+ L+  P   EA   RG A       E AI+ +  A++  
Sbjct: 381 NRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIK 440

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    +ALE +P+  +  + RG+          A+  
Sbjct: 441 PDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAIAS 500

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++   ++  A+   G+AL ++G +++A  ++ +A+++  +  EAW +      +L 
Sbjct: 501 YDRALEFKPDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLG 560

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L        A++ RG+ L  LG+ ++AI      L   P + +  Y R
Sbjct: 561 RLEEAIASYDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNR 620

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKINS 678
            +    +G   EAI  YD AL+ + D  + +      L  L   ++ IA Y  A KINS
Sbjct: 621 GNALDDLGRLEEAIASYDRALEFKPDYHQAWYNRGNALDDLGRLEEAIASYDQAIKINS 679



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 7/305 (2%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI+ +D+ L+  P Y EA   RG A       E AI+ +  A++  P   +AW  R
Sbjct: 51  QYQEAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEIKPDDPDAWNNR 110

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   LG   +AI    +ALE +P+  +  + RG+       F  A+      ++   +
Sbjct: 111 GNALYNLGRFEQAIASYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFKPD 170

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +  A+   G+AL ++G +++A  ++ KA++   ++ EAW +      +L   E+A+    
Sbjct: 171 DPDAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWD 230

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + L        A++ RG+ L  LG+ ++AI      L   P + +    R      +G +
Sbjct: 231 RALEFKPDDHDAWNYRGIALANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALANLGRF 290

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
            EAI  +D AL+ + D  +       A+  + IAL    +       +D   +  P + E
Sbjct: 291 EEAIASWDRALEFKPDDHD-------AWNYRGIALGNLGRFEEAIASYDKALEFKPDYHE 343

Query: 696 YWCKR 700
            W  R
Sbjct: 344 AWYNR 348



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 144/315 (45%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G+   AI+ +D+ L+  P   EA   RG A       E AI+ +  A++  
Sbjct: 347 NRGIALKNLGRLEEAIASWDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIK 406

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    +ALE +P+  +  + RG+       F  A+  
Sbjct: 407 PDKHEAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIAS 466

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +   A+   G+AL ++G  ++A  ++ +A++   +  +AW +      +L 
Sbjct: 467 YDRALEIKPDKHEAWYNRGVALGNLGRLEEAIASYDRALEFKPDDPDAWYNRGVALGNLG 526

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L I     +A++ RG+ L+ LG+ ++AI      L   P + +    R
Sbjct: 527 RFEEAIASYDRALEIKPDKHEAWYNRGVALYNLGRLEEAIASYDRALEFKPDDPDAWNNR 586

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                 +G + +AI  YD AL+ + D  +       A+Y +  AL    ++      +D 
Sbjct: 587 GVALGNLGRFEQAIASYDRALEFKPDDPD-------AWYNRGNALDDLGRLEEAIASYDR 639

Query: 686 DGDIDPLFKEYWCKR 700
             +  P + + W  R
Sbjct: 640 ALEFKPDYHQAWYNR 654



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 126/271 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N G++  AI+ +D+ L+  P   EA   RG A       E AI+ +  A++  
Sbjct: 415 NRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRFEEAIASYDRALEIK 474

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    +ALEF+P+  D  + RG+       F  A+  
Sbjct: 475 PDKHEAWYNRGVALGNLGRLEEAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEEAIAS 534

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +   A+   G+AL ++G  ++A  ++ +A++   +  +AW +      +L 
Sbjct: 535 YDRALEIKPDKHEAWYNRGVALYNLGRLEEAIASYDRALEFKPDDPDAWNNRGVALGNLG 594

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L        A++ RG  L  LG+ ++AI      L   P   +  Y R
Sbjct: 595 RFEQAIASYDRALEFKPDDPDAWYNRGNALDDLGRLEEAIASYDRALEFKPDYHQAWYNR 654

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            +    +G   EAI  YD A+ +  +S   +
Sbjct: 655 GNALDDLGRLEEAIASYDQAIKINSNSANAY 685



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 131/272 (48%), Gaps = 2/272 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N G++  AI+ +D+ L+  P   EA   RG A      LE AI+ +  A++  
Sbjct: 449 NRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALGNLGRLEEAIASYDRALEFK 508

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   LG   EAI    +ALE +P+  +  + RG+  +       A+  
Sbjct: 509 PDDPDAWYNRGVALGNLGRFEEAIASYDRALEIKPDKHEAWYNRGVALYNLGRLEEAIAS 568

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++   ++  A+   G+AL ++G +++A  ++ +A++   +  +AW +      DL 
Sbjct: 569 YDRALEFKPDDPDAWNNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGNALDDLG 628

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L     + +A++ RG  L  LG+ ++AI      + I+ ++    Y +
Sbjct: 629 RLEEAIASYDRALEFKPDYHQAWYNRGNALDDLGRLEEAIASYDQAIKINSNSANAYYNK 688

Query: 626 ASCYHAIGEYREAIKDYDAA--LDLELDSMEK 655
           A CY        AI++   A  LD+E   M K
Sbjct: 689 ACCYGLQNNVELAIENLQRAINLDVEYQDMAK 720



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 132/275 (48%), Gaps = 14/275 (5%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+  F++++   P + +    +GT   +  + + AI+ +  A++  P   EAW  R
Sbjct: 17  RYQDALKGFNRLVSLLPQWEDGWFYQGTTFDYLEQYQEAIASYDRALEIKPDYHEAWYNR 76

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   LG   +AI    +ALE +P+  D  + RG   +    F  A+      +++  +
Sbjct: 77  GVALGNLGRFEQAIASYDRALEIKPDDPDAWNNRGNALYNLGRFEQAIASYDRALEIKPD 136

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSE 568
              A+   G+AL ++G +++A  ++ +A++   +  +AW       G+L +F Q +A+ +
Sbjct: 137 YHEAWYNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEQAIASYD 196

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           KALE           + +A++ RG+ L  LG+ ++AI      L   P + +    R   
Sbjct: 197 KALE-------FKPDYHEAWYNRGIALGNLGRLEEAIASWDRALEFKPDDHDAWNYRGIA 249

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
              +G + EAI  +D AL+ + D  + +  + +A 
Sbjct: 250 LANLGRFEEAIASWDRALEFKPDDHDAWNYRGIAL 284



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 21/214 (9%)

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           ++ K +  A++  +  V L  + +  + Y G     + +Y++A  ++ +A+++  ++ EA
Sbjct: 13  YELKRYQDALKGFNRLVSLLPQWEDGWFYQGTTFDYLEQYQEAIASYDRALEIKPDYHEA 72

Query: 554 W-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           W       G+L +F Q +A+ ++ALE       I      A++ RG  L+ LG+ ++AI 
Sbjct: 73  WYNRGVALGNLGRFEQAIASYDRALE-------IKPDDPDAWNNRGNALYNLGRFEQAIA 125

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
                L I P   E  Y R      +G + +AI  YD AL+ + D  +       A+Y +
Sbjct: 126 SYDRALEIKPDYHEAWYNRGVALGNLGRFEQAIASYDRALEFKPDDPD-------AWYNR 178

Query: 667 EIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            +AL    +       +D   +  P + E W  R
Sbjct: 179 GVALGNLGRFEQAIASYDKALEFKPDYHEAWYNR 212



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/234 (20%), Positives = 105/234 (44%), Gaps = 7/234 (2%)

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           +A++  ++ +   P   D    +G      + +  A+      +++  +   A+   G+A
Sbjct: 20  DALKGFNRLVSLLPQWEDGWFYQGTTFDYLEQYQEAIASYDRALEIKPDYHEAWYNRGVA 79

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
           L ++G +++A  ++ +A+++  +  +AW +      +L   E+A+    + L I   + +
Sbjct: 80  LGNLGRFEQAIASYDRALEIKPDDPDAWNNRGNALYNLGRFEQAIASYDRALEIKPDYHE 139

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           A++ RG+ L  LG+ ++AI      L   P + +  Y R      +G + +AI  YD AL
Sbjct: 140 AWYNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNRGVALGNLGRFEQAIASYDKAL 199

Query: 647 DLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           + + D  E       A+Y + IAL    ++      +D   +  P   + W  R
Sbjct: 200 EFKPDYHE-------AWYNRGIALGNLGRLEEAIASWDRALEFKPDDHDAWNYR 246



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 77/176 (43%), Gaps = 7/176 (3%)

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           L L  +  Y+ A +   + + L   + + W +    +  L   ++A+    + L I   +
Sbjct: 10  LKLYELKRYQDALKGFNRLVSLLPQWEDGWFYQGTTFDYLEQYQEAIASYDRALEIKPDY 69

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
            +A++ RG+ L  LG+ ++AI      L I P + +    R +  + +G + +AI  YD 
Sbjct: 70  HEAWYNRGVALGNLGRFEQAIASYDRALEIKPDDPDAWNNRGNALYNLGRFEQAIASYDR 129

Query: 645 ALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           AL+++ D  E       A+Y + +AL    +       +D   +  P   + W  R
Sbjct: 130 ALEIKPDYHE-------AWYNRGVALGNLGRFEQAIASYDRALEFKPDDPDAWYNR 178



 Score = 43.5 bits (101), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 3/122 (2%)

Query: 11  YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQ 70
           Y L +  + I   D  + +      A   R     L +L  + +AI   D  L    +  
Sbjct: 115 YNLGRFEQAIASYDRALEIKPDYHEAWYNRG--VALGNLGRFEQAIASYDRALEFKPDDP 172

Query: 71  DIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           D   NR      L   +  I   DKAL+  P   +A+  +G A   LGR EEA++ W++ 
Sbjct: 173 DAWYNRGVALGNLGRFEQAIASYDKALEFKPDYHEAWYNRGIALGNLGRLEEAIASWDRA 232

Query: 130 YE 131
            E
Sbjct: 233 LE 234



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L +L  + +AI   D  L    +  D  N R      L   +  I   DKAL+  P   +
Sbjct: 284 LANLGRFEEAIASWDRALEFKPDDHDAWNYRGIALGNLGRFEEAIASYDKALEFKPDYHE 343

Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
           A+  +G A   LGR EEA++ W++  E
Sbjct: 344 AWYNRGIALKNLGRLEEAIASWDRALE 370


>gi|282901533|ref|ZP_06309455.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281193576|gb|EFA68551.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 1280

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 137/264 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RGIA+ N G    AI  + Q +  +P Y +A   RG AR    + + ++ D+T+AI  N
Sbjct: 517 GRGIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNRGIARFNLEDKQGSVDDYTQAININ 576

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +A+   G  R+ LG+  EA+ + ++AL   P+  +    RG+   +  D   A++D
Sbjct: 577 PNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVARGLTRSELGDNQGAIDD 636

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + L+ +    Y   G+  S I +Y++A + + +AI +  ++ +A+ +    Y DL 
Sbjct: 637 YTQALNLNPDYACIYNNRGIVRSDIADYQRAIDDYTEAINISPDYADAYYNRAIVYYDLG 696

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N ++A++   Q L I    + AY  RG  L+ LG  + AI D    L IDPS  +    R
Sbjct: 697 NYQRAIDDYTQSLEIKSNCADAYIGRGTALYKLGDSQGAINDFHHALDIDPSYADAYNNR 756

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
               + +G+++ AI D+  ALD++
Sbjct: 757 GIVRYELGDHQGAIGDFHHALDID 780



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 144/280 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  +   G Y  AI  + Q L+ D  Y EA    GT R    + E AI D+T+AI  N
Sbjct: 449 NRGAIRTYLGNYQGAIDDYIQALRVDSNYVEAYYNWGTTRINLEDNEGAIDDYTQAININ 508

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +A+  RG AR  LG+   AI D ++A+   PN A   + RGI  F  +D   +V+D
Sbjct: 509 PNYAQAYYGRGIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNRGIARFNLEDKQGSVDD 568

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + ++     AY   G+  S +G+  +A   + +A+ ++ +  E +        +L 
Sbjct: 569 YTQAININPNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDDTETYVARGLTRSELG 628

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +++ A++   Q L ++  ++  Y+ RG++   +  +++AI D +  + I P   +  Y R
Sbjct: 629 DNQGAIDDYTQALNLNPDYACIYNNRGIVRSDIADYQRAIDDYTEAINISPDYADAYYNR 688

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           A  Y+ +G Y+ AI DY  +L+++ +  + ++ +  A Y+
Sbjct: 689 AIVYYDLGNYQRAIDDYTQSLEIKSNCADAYIGRGTALYK 728



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 149/289 (51%), Gaps = 3/289 (1%)

Query: 374 SKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +++ +IS D+     +R I   + G Y  AI  + Q L+      +A IGRGTA     +
Sbjct: 672 TEAINISPDYADAYYNRAIVYYDLGNYQRAIDDYTQSLEIKSNCADAYIGRGTALYKLGD 731

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+DF  A+  +PS  +A+  RG  R  LG+   AI D   AL+ +P+ AD  + RG
Sbjct: 732 SQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIGDFHHALDIDPSYADAYNNRG 791

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           IV ++ +D   A+ED +  + ++     AY   G+    +GE + A E   +A  +  N+
Sbjct: 792 IVRYELRDNRGAIEDFNHALNINSNYAQAYNNRGIVRICLGERQLAIEDFTQATIIASNY 851

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            E++ +      +L N +KA+E   Q L I+  +++AY+ RG+    LG  + A  D S 
Sbjct: 852 TESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDSEWAKDDFSQ 911

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
            L I+P   E    R    + +G+ + AI+D++ AL +  + +E + ++
Sbjct: 912 ALQINPYYAEAYNNRGIVCYKLGDRQGAIEDFNQALKINSNYVEAYNIR 960



 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 145/291 (49%), Gaps = 6/291 (2%)

Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
           KS   D  + RG A    G    AI+ F   L  DP Y +A   RG  R    + + AI 
Sbjct: 712 KSNCADAYIGRGTALYKLGDSQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIG 771

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           DF  A+  +PS  +A+  RG  R  L ++  AI+D + AL    N A   + RGIV    
Sbjct: 772 DFHHALDIDPSYADAYNNRGIVRYELRDNRGAIEDFNHALNINSNYAQAYNNRGIVRICL 831

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
            +   A+ED +    +      +Y   G A   +G  +KA E   +A+ ++ N+ +A+ +
Sbjct: 832 GERQLAIEDFTQATIIASNYTESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNN 891

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
               Y DL +SE A +   Q L I+  +++AY+ RG++ + LG  + AI+D +  L I+ 
Sbjct: 892 RGVAYTDLGDSEWAKDDFSQALQINPYYAEAYNNRGIVCYKLGDRQGAIEDFNQALKINS 951

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDL-ELDSMEKFVLQCLAFYQK 666
           + +E   +R +  + +G+ + AI+D++ AL L  LD  E      L F++K
Sbjct: 952 NYVEAYNIRGNIRYELGDRQGAIEDFNRALSLGSLDLTEN-----LKFWEK 997



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 150/309 (48%), Gaps = 34/309 (11%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+ + G    AI  F+Q+++ +  + +    RG         + AI+DF++AI+ NP
Sbjct: 314 RGLARYDLGDKQGAIDDFNQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINP 373

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  +A+  RG AR+ LG+   AI D +++L   P  A   + RGI+        AA++D 
Sbjct: 374 NYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKFASAYYNRGIIRSDLGSNKAAMDDC 433

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++++     AY   G   + +G Y+ A + +++A+++D N++EA+ +      +L +
Sbjct: 434 TQAIRINPNYAEAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYVEAYYNWGTTRINLED 493

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR- 625
           +E A++   Q + I+  +++AY+ RG+    LG  + AI D +  +  +P+  +  Y R 
Sbjct: 494 NEGAIDDYTQAININPNYAQAYYGRGIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNRG 553

Query: 626 --------------------------ASCYHAIGEYR-------EAIKDYDAALDLELDS 652
                                     A  Y+A G  R       EA+ +Y  AL++  D 
Sbjct: 554 IARFNLEDKQGSVDDYTQAININPNYAQAYYAWGMLRSELGDKPEAVNNYTQALNINPDD 613

Query: 653 MEKFVLQCL 661
            E +V + L
Sbjct: 614 TETYVARGL 622



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 135/282 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+   + G    AI  F+Q L  +  + +A   RG AR    + + AI DF + I+ N
Sbjct: 279 SRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAIDDFNQVIRIN 338

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               + +  RG     LG   EAI D S+A+   PN A   H RG+   +  D   A++D
Sbjct: 339 SHFADGYAARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQLGDKQGAIDD 398

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + L+ +  SAY   G+  S +G  K A +   +AI+++ N+ EA+ +       L 
Sbjct: 399 YTQSLNLNPKFASAYYNRGIIRSDLGSNKAAMDDCTQAIRINPNYAEAYNNRGAIRTYLG 458

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N + A++   Q L +D  + +AY+  G     L  ++ AI D +  + I+P+  +  Y R
Sbjct: 459 NYQGAIDDYIQALRVDSNYVEAYYNWGTTRINLEDNEGAIDDYTQAININPNYAQAYYGR 518

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
                 +G+ + AI DY  A++   +  + +  + +A +  E
Sbjct: 519 GIARFNLGDKQGAIDDYTQAINTNPNYAQAYYNRGIARFNLE 560



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 137/272 (50%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RGIA+ + G +  AI+ F Q +  +    +A + RG AR+   + + AI DF +A+  
Sbjct: 210 LCRGIARSDLGDHRGAINDFTQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDI 269

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A   RG   + +G   +AI D ++ L       D    RG+  +   D   A++
Sbjct: 270 NPNLALAAYSRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAID 329

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++++      Y   GL    +G +++A     +AI+++ N+ +A+ +       L
Sbjct: 330 DFNQVIRINSHFADGYAARGLVYCDLGNHQEAINDFSQAIRINPNYAQAYHNRGVARSQL 389

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + + A++   Q L ++ +F+ AY+ RG++   LG +K A+ D +  + I+P+  E    
Sbjct: 390 GDKQGAIDDYTQSLNLNPKFASAYYNRGIIRSDLGSNKAAMDDCTQAIRINPNYAEAYNN 449

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           R +    +G Y+ AI DY  AL ++ + +E +
Sbjct: 450 RGAIRTYLGNYQGAIDDYIQALRVDSNYVEAY 481



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 148/716 (20%), Positives = 290/716 (40%), Gaps = 95/716 (13%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLL 63
           +R  L      I +  + + ++S +A A   R I  + L     ++ ++++A+ I  +L 
Sbjct: 215 ARSDLGDHRGAINDFTQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDINPNLA 274

Query: 64  AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
             +Y       R   +S +   +  I D ++ L L+     AY  +G A   LG K+ A+
Sbjct: 275 LAAYS------RGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARYDLGDKQGAI 328

Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS-VTCEYDVSNSMSSLTVSESGLNAN 182
                          D  Q + +          R  V C  D+ N   ++      +  N
Sbjct: 329 D--------------DFNQVIRINSHFADGYAARGLVYC--DLGNHQEAINDFSQAIRIN 372

Query: 183 DKMSETSENH--------NKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSV 234
              ++   N         +K    D  +QS +++   + + ++  +   RSD     +++
Sbjct: 373 PNYAQAYHNRGVARSQLGDKQGAIDDYTQSLNLNPKFASAYYNRGII--RSDLGSNKAAM 430

Query: 235 PVSKSGLHIN----------GKLREVSENHNGSSDG--------SKSTHA------SRDA 270
                 + IN          G +R    N+ G+ D         S    A      +R  
Sbjct: 431 DDCTQAIRINPNYAEAYNNRGAIRTYLGNYQGAIDDYIQALRVDSNYVEAYYNWGTTRIN 490

Query: 271 SEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDS----NTN-- 324
            E N  + DD+          ++N  + +   G       L     +++D     NTN  
Sbjct: 491 LEDNEGAIDDY------TQAININPNYAQAYYGRGIARFNLGDKQGAIDDYTQAINTNPN 544

Query: 325 -SESYSKSSIS-----DNKSS--DSTES------RSKLSFKWDMLKETSNEAKRNKKFCV 370
            +++Y    I+     D + S  D T++       ++  + W ML+    +    K   V
Sbjct: 545 YAQAYYNRGIARFNLEDKQGSVDDYTQAININPNYAQAYYAWGMLRSELGD----KPEAV 600

Query: 371 TRISKSKSISVD---FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
              +++ +I+ D     ++RG+ +   G    AI  + Q L  +P Y      RG  R+ 
Sbjct: 601 NNYTQALNINPDDTETYVARGLTRSELGDNQGAIDDYTQALNLNPDYACIYNNRGIVRSD 660

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
             + + AI D+TEAI  +P   +A+  R      LG    AI D +++LE + N AD   
Sbjct: 661 IADYQRAIDDYTEAINISPDYADAYYNRAIVYYDLGNYQRAIDDYTQSLEIKSNCADAYI 720

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG   +K  D   A+ D    + +D     AY   G+    +G+++ A      A+ +D
Sbjct: 721 GRGTALYKLGDSQGAINDFHHALDIDPSYADAYNNRGIVRYELGDHQGAIGDFHHALDID 780

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            ++ +A+ +      +L ++  A+E     L I+  +++AY+ RG++   LG+ + AI+D
Sbjct: 781 PSYADAYNNRGIVRYELRDNRGAIEDFNHALNINSNYAQAYNNRGIVRICLGERQLAIED 840

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            +    I  +  E    R    + +G  ++AI+D++ AL++  +  + +  + +A+
Sbjct: 841 FTQATIIASNYTESYINRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAY 896



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 80/158 (50%), Gaps = 3/158 (1%)

Query: 508 ACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           A +++D E + A+TYL  G+A S +G+++ A     ++I ++ N  +A+        +L 
Sbjct: 196 AVLEIDLE-EDAHTYLCRGIARSDLGDHRGAINDFTQSISINSNLAQAYMERGIARSNLG 254

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + ++A+E   Q L I+   + A + RG+    +G  +KAI D +  L ++ +  +    R
Sbjct: 255 DGQEAIEDFNQALDINPNLALAAYSRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRR 314

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
               + +G+ + AI D++  + +     + +  + L +
Sbjct: 315 GLARYDLGDKQGAIDDFNQVIRINSHFADGYAARGLVY 352



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 27/158 (17%)

Query: 10  RYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDSLL 63
           RY L      I + +  + ++S  A A   R  + ++C      ++ ++++A  I+ S  
Sbjct: 794 RYELRDNRGAIEDFNHALNINSNYAQAYNNR-GIVRICLGERQLAIEDFTQAT-IIASNY 851

Query: 64  AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
            +SY      NR +   +L   +  I D ++AL ++P   QAY  +G A++ LG  E   
Sbjct: 852 TESY-----INRGYARYELGNRQKAIEDFNQALNINPNYAQAYNNRGVAYTDLGDSE--- 903

Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTC 161
             W K          D  Q L++      A  +R + C
Sbjct: 904 --WAKD---------DFSQALQINPYYAEAYNNRGIVC 930



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%)

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           DL +   A+    Q + I+   ++AY  RG+    LG  ++AI+D +  L I+P+     
Sbjct: 218 DLGDHRGAINDFTQSISINSNLAQAYMERGIARSNLGDGQEAIEDFNQALDINPNLALAA 277

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
           Y R   +  +G   +AI D++  L L     + +  + LA Y
Sbjct: 278 YSRGVTHSDMGYLEKAIDDFNQTLHLNSAFFDAYTRRGLARY 319


>gi|282900764|ref|ZP_06308705.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194348|gb|EFA69304.1| hypothetical protein CRC_02125 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 1024

 Score =  140 bits (352), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 149/286 (52%), Gaps = 3/286 (1%)

Query: 375 KSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           KS S+   + +F  +R       G    AI  + Q ++ +P Y  A IGRG AR+   + 
Sbjct: 217 KSSSVYSNNAEFYFNRAYKLYESGDKQGAIVDYTQAIQINPNYALAYIGRGNARSDLGDK 276

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AI D+ +AIQ NP+   A+  RG AR+ LG+   AI D ++A++  PN AD  + RGI
Sbjct: 277 QGAIVDYNQAIQINPNYALAYYNRGNARSELGDKQGAIVDYNQAIQINPNYADAYYNRGI 336

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
              +  D   A+ D +  ++++  +  AY   G+A S +G+ + A   + +AIQ++ N  
Sbjct: 337 ARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIARSELGDKQGAIVDYNQAIQINPNNA 396

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +A+ +      +L + + A+    Q + I+  ++ AY+ RGL    LG  + AI D +  
Sbjct: 397 DAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQA 456

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           + I+P+N    Y R      +G+ + AI DY+ A+ +  +  + ++
Sbjct: 457 IQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYI 502



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 156/295 (52%), Gaps = 3/295 (1%)

Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
           K+  +   +++  I+ ++ L+   RG A+ + G    AI  ++Q ++ +P Y  A   RG
Sbjct: 242 KQGAIVDYTQAIQINPNYALAYIGRGNARSDLGDKQGAIVDYNQAIQINPNYALAYYNRG 301

Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
            AR+   + + AI D+ +AIQ NP+  +A+  RG AR+ LG+   AI D ++A++  PN 
Sbjct: 302 NARSELGDKQGAIVDYNQAIQINPNYADAYYNRGIARSELGDKQGAIVDYNQAIQINPND 361

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           AD  + RGI   +  D   A+ D +  ++++  N  AY   G+A S +G+ + A   + +
Sbjct: 362 ADAYNNRGIARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQ 421

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           AIQ++ N+  A+ +      +L + + A+    Q + I+   + AY+ RGL    LG  +
Sbjct: 422 AIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQ 481

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
            AI D +  + I+P+  +    R +    +G+ + AI DY+ A+ +  +  + ++
Sbjct: 482 GAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYI 536



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 144/263 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+   G    AI  ++Q ++ +P Y +A IGRG AR+   + + AI D+ +AIQ N
Sbjct: 469 NRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQIN 528

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +A+  RG AR+ LG+   AI D ++A++  PN AD  + RG+   +  D   A+ D
Sbjct: 529 PNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVD 588

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++  N  AY   G+A S +G+ + A   + +AIQ++ N+ +++ +      +L 
Sbjct: 589 YNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELG 648

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q + I+  ++ +Y+ RG+    LG  + AI D +  + I+P+       R
Sbjct: 649 DKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNR 708

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
                 +G+ + AI DY+ A+ +
Sbjct: 709 GLARSELGDKQGAIVDYNQAIQI 731



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 156/300 (52%), Gaps = 3/300 (1%)

Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
           K+  +   +++  I+ ++ L+   RG A+   G    AI  ++Q ++ +P Y +A   RG
Sbjct: 276 KQGAIVDYNQAIQINPNYALAYYNRGNARSELGDKQGAIVDYNQAIQINPNYADAYYNRG 335

Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
            AR+   + + AI D+ +AIQ NP+  +A+  RG AR+ LG+   AI D ++A++  PN+
Sbjct: 336 IARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIARSELGDKQGAIVDYNQAIQINPNN 395

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           AD  + RGI   +  D   A+ D +  ++++     AY   GLA S +G+ + A   + +
Sbjct: 396 ADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQ 455

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           AIQ++ N   A+ +      +L + + A+    Q + I+  ++ AY  RG     LG  +
Sbjct: 456 AIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQ 515

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            AI D +  + I+P+  +    R +    +G+ + AI DY+ A+ +  +  + +  + LA
Sbjct: 516 GAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLA 575



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 150/281 (53%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  + RG A+   G    AI  ++Q ++ +P Y +A IGRG AR+   + + AI D+ +A
Sbjct: 499 DAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQA 558

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ NP+  +A+  RG AR+ LG+   AI D ++A++  PN+AD  + RGI   +  D   
Sbjct: 559 IQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQG 618

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++++     +Y   G+A S +G+ + A   + +AIQ++ N+ +++ +     
Sbjct: 619 AIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIAR 678

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L + + A+    Q + I+  ++ AY+ RGL    LG  + AI D +  + I+P+N   
Sbjct: 679 SELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYA 738

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
              R      +G+ + AI DY  A+ +  +  + +  + +A
Sbjct: 739 YNNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIA 779



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 148/281 (52%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RGIA+   G    AI  ++Q ++ +P   +A   RG AR+   + + AI D+ +A
Sbjct: 329 DAYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYNNRGIARSELGDKQGAIVDYNQA 388

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ NP+  +A+  RG AR+ LG+   AI D ++A++  PN A   + RG+   +  D   
Sbjct: 389 IQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQG 448

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++++  N  AY   GLA S +G+ + A   + +AIQ++ N+ +A+       
Sbjct: 449 AIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNAR 508

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L + + A+    Q + I+  ++ AY  RG     LG  + AI D +  + I+P++ + 
Sbjct: 509 SELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADA 568

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            Y R      +G+ + AI DY+ A+ +  ++ + +  + +A
Sbjct: 569 YYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIA 609



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 139/262 (53%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RGIA+   G    AI  + Q ++ +P Y ++   RG AR+   + + AI D+ +AIQ NP
Sbjct: 742  RGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINP 801

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            +  +A+  RG AR+ LG+   AI D ++A++  PN+AD  + RGI   +  D   A+ D 
Sbjct: 802  NDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADSYYNRGIARSELGDKQGAIVDY 861

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            +  ++++     +Y   G+A S +G+ + A   + +AIQ++ N+ +A+        +L +
Sbjct: 862  NQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGD 921

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             + A+    Q + I+  ++ AY+ RG+    LG  + AI D +  + I+P++ +  Y R 
Sbjct: 922  KQGAIVDYNQAIQINPNYADAYNNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRG 981

Query: 627  SCYHAIGEYREAIKDYDAALDL 648
                 +G+ + A  D+  A  L
Sbjct: 982  LARSELGDKQGARGDFQTAARL 1003



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 150/277 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+   G    AI  ++Q ++ +P Y ++   RG AR+   + + AI D+T+AIQ N
Sbjct: 605 NRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQIN 664

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +++  RG AR+ LG+   AI D ++A++  PN A   + RG+   +  D   A+ D
Sbjct: 665 PNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVD 724

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++  N  AY   G+A S +G+ + A   + +AIQ++ N+ +++ +      +L 
Sbjct: 725 YNQAIQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELG 784

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q + I+   + AY+ RGL    LG  + AI D +  + I+P+N +  Y R
Sbjct: 785 DKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADSYYNR 844

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
                 +G+ + AI DY+ A+ +  +  + +  + +A
Sbjct: 845 GIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIA 881



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 144/277 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+   G    AI  ++Q ++ +P   +A   RG AR+   + + AI D+ +AIQ N
Sbjct: 367 NRGIARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQIN 426

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG AR+ LG+   AI D ++A++  PN+A   + RG+   +  D   A+ D
Sbjct: 427 PNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGAIVD 486

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++     AY   G A S +G+ + A   + +AIQ++ N+ +A+        +L 
Sbjct: 487 YNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELG 546

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q + I+   + AY+ RGL    LG  + AI D +  + I+P+N +    R
Sbjct: 547 DKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNR 606

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
                 +G+ + AI DY+ A+ +  +  + +  + +A
Sbjct: 607 GIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIA 643



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 144/277 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+   G    AI  ++Q ++ +P    A   RG AR+   + + AI D+ +AIQ N
Sbjct: 435 NRGLARSELGDKQGAIVDYNQAIQINPNNAYAYYNRGLARSELGDKQGAIVDYNQAIQIN 494

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +A+  RG AR+ LG+   AI D ++A++  PN AD    RG    +  D   A+ D
Sbjct: 495 PNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVD 554

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++  +  AY   GLA S +G+ + A   + +AIQ++ N  +A+ +      +L 
Sbjct: 555 YNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELG 614

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q + I+  ++ +Y+ RG+    LG  + AI D +  + I+P+  +  Y R
Sbjct: 615 DKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNR 674

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
                 +G+ + AI DY+ A+ +  +    +  + LA
Sbjct: 675 GIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLA 711



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 149/281 (53%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG+A+   G    AI  ++Q ++ +P   +A   RG AR+   + + AI D+ +A
Sbjct: 567 DAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQA 626

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ NP+  +++  RG AR+ LG+   AI D ++A++  PN AD  + RGI   +  D   
Sbjct: 627 IQINPNYADSYYNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQG 686

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++++     AY   GLA S +G+ + A   + +AIQ++ N   A+ +     
Sbjct: 687 AIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYNNRGIAR 746

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L + + A+    Q + I+  ++ +Y+ RG+    LG  + AI D +  + I+P++ + 
Sbjct: 747 SELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNDADA 806

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            Y R      +G+ + AI DY+ A+ +  ++ + +  + +A
Sbjct: 807 YYNRGLARSELGDKQGAIVDYNQAIQINPNNADSYYNRGIA 847



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 146/281 (51%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  + RG A+   G    AI  ++Q ++ +P   +A   RG AR+   + + AI D+ +A
Sbjct: 533 DAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQA 592

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ NP+  +A+  RG AR+ LG+   AI D ++A++  PN AD  + RGI   +  D   
Sbjct: 593 IQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQG 652

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++++     +Y   G+A S +G+ + A   + +AIQ++ N+  A+ +     
Sbjct: 653 AIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLAR 712

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L + + A+    Q + I+   + AY+ RG+    LG  + AI D +  + I+P+  + 
Sbjct: 713 SELGDKQGAIVDYNQAIQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQINPNYADS 772

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            Y R      +G+ + AI DY+ A+ +  +  + +  + LA
Sbjct: 773 YYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLA 813



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 141/277 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+   G    AI  ++Q ++ +P Y  A   RG AR+   + + AI D+ +AIQ N
Sbjct: 401 NRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQIN 460

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG AR+ LG+   AI D ++A++  PN AD    RG    +  D   A+ D
Sbjct: 461 PNNAYAYYNRGLARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVD 520

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++     AY   G A S +G+ + A   + +AIQ++ N  +A+ +      +L 
Sbjct: 521 YNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELG 580

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q + I+   + AY+ RG+    LG  + AI D +  + I+P+  +  Y R
Sbjct: 581 DKQGAIVDYNQAIQINPNNADAYNNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNR 640

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
                 +G+ + AI DY  A+ +  +  + +  + +A
Sbjct: 641 GIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIA 677



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 146/277 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+   G    AI  ++Q ++ +P    A   RG AR+   + + AI D+T+AIQ N
Sbjct: 707 NRGLARSELGDKQGAIVDYNQAIQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQIN 766

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +++  RG AR+ LG+   AI D ++A++  PN AD  + RG+   +  D   A+ D
Sbjct: 767 PNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVD 826

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++  N  +Y   G+A S +G+ + A   + +AIQ++ N+ +++ +      +L 
Sbjct: 827 YNQAIQINPNNADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELG 886

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q + I+  ++ AY  RG     LG  + AI D +  + I+P+  +    R
Sbjct: 887 DKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYNNR 946

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
                 +G+ + AI DY+ A+ +  +  + +  + LA
Sbjct: 947 GIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLA 983



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 148/281 (52%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RGIA+   G    AI  ++Q ++ +P Y  A   RG AR+   + + AI D+ +A
Sbjct: 669 DSYYNRGIARSELGDKQGAIVDYNQAIQINPNYAYAYNNRGLARSELGDKQGAIVDYNQA 728

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ NP+   A+  RG AR+ LG+   AI D ++A++  PN AD  + RGI   +  D   
Sbjct: 729 IQINPNNAYAYNNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQG 788

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++++  +  AY   GLA S +G+ + A   + +AIQ++ N  +++ +     
Sbjct: 789 AIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQAIQINPNNADSYYNRGIAR 848

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L + + A+    Q + I+  ++ +Y+ RG+    LG  + AI D +  + I+P+  + 
Sbjct: 849 SELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADA 908

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
              R +    +G+ + AI DY+ A+ +  +  + +  + +A
Sbjct: 909 YIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYNNRGIA 949



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 144/276 (52%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RGIA+   G    AI  + Q ++ +P Y ++   RG AR+   + + AI D+ +A
Sbjct: 635 DSYYNRGIARSELGDKQGAIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQA 694

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ NP+   A+  RG AR+ LG+   AI D ++A++  PN+A   + RGI   +  D   
Sbjct: 695 IQINPNYAYAYNNRGLARSELGDKQGAIVDYNQAIQINPNNAYAYNNRGIARSELGDKQG 754

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++++     +Y   G+A S +G+ + A   + +AIQ++ N  +A+ +     
Sbjct: 755 AIVDYTQAIQINPNYADSYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLAR 814

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L + + A+    Q + I+   + +Y+ RG+    LG  + AI D +  + I+P+  + 
Sbjct: 815 SELGDKQGAIVDYNQAIQINPNNADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADS 874

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
            Y R      +G+ + AI DY+ A+ +  +  + ++
Sbjct: 875 YYNRGIARSELGDKQGAIVDYNQAIQINPNYADAYI 910



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 120/229 (52%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RGIA+   G    AI  ++Q ++ +P   +A   RG AR+   + + AI D+ +A
Sbjct: 771 DSYYNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGAIVDYNQA 830

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ NP+  +++  RG AR+ LG+   AI D ++A++  PN AD  + RGI   +  D   
Sbjct: 831 IQINPNNADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQG 890

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++++     AY   G A S +G+ + A   + +AIQ++ N+ +A+ +     
Sbjct: 891 AIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYNNRGIAR 950

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            +L + + A+    Q + I+   + AY+ RGL    LG  + A  D  +
Sbjct: 951 SELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGARGDFQT 999



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 88/157 (56%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           + D   +RGIA+   G    AI  ++Q ++ +P Y ++   RG AR+   + + AI D+ 
Sbjct: 837 NADSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADSYYNRGIARSELGDKQGAIVDYN 896

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AIQ NP+  +A+  RG AR+ LG+   AI D ++A++  PN AD  + RGI   +  D 
Sbjct: 897 QAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQAIQINPNYADAYNNRGIARSELGDK 956

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D +  ++++  +  AY   GLA S +G+ + A
Sbjct: 957 QGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQGA 993



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 73/131 (55%)

Query: 382  DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
            D   +RGIA+   G    AI  ++Q ++ +P Y +A IGRG AR+   + + AI D+ +A
Sbjct: 873  DSYYNRGIARSELGDKQGAIVDYNQAIQINPNYADAYIGRGNARSELGDKQGAIVDYNQA 932

Query: 442  IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
            IQ NP+  +A+  RG AR+ LG+   AI D ++A++  PN AD  + RG+   +  D   
Sbjct: 933  IQINPNYADAYNNRGIARSELGDKQGAIVDYNQAIQINPNDADAYYNRGLARSELGDKQG 992

Query: 502  AVEDLSACVKL 512
            A  D     +L
Sbjct: 993  ARGDFQTAARL 1003


>gi|425447216|ref|ZP_18827207.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
 gi|389732284|emb|CCI03758.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
          Length = 605

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 162/320 (50%), Gaps = 6/320 (1%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            V + S+  S + +    +G    N  +Y  AI+ + + ++ +P Y EA   RG    + 
Sbjct: 271 TVAQSSQPNSTTAETYFKQGEDYRNNNQYDKAIAAYTKAIEINPQYAEAYKNRGIVYLYL 330

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++ E A++D  +AI+ NP    A+  RG     L E  +A+ D +KA+E  P        
Sbjct: 331 KDYEKAMADNNKAIEINPQYSNAYNNRGNVYYKLKEYDKAMADYNKAIEINPQLFQAYDN 390

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG   +  K+++ A+ D +  ++++ ++  AY   G     + +Y+KA + + KAI+++ 
Sbjct: 391 RGSFYYNLKEYDKAIADYNKVIEINPQDAEAYYKRGYVYYDLKDYEKAIKDYNKAIEINP 450

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              +++     FY  L   +KA++   + + I+ + + AY+ RG + H L ++ KAIKD 
Sbjct: 451 QNADSYYLRGSFYYILKEYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLKEYDKAIKDY 510

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAF 663
           +  L I+P   +  Y R + Y  + EY +AIKDY+ A+++     + +     V + L  
Sbjct: 511 NKALEINPQYADAYYTRGNVYLHLKEYDKAIKDYNKAIEINPQYADAYNNRGVVYEILKD 570

Query: 664 YQKEIALYT-ASKINSEFCW 682
           Y+K I  Y  A +IN +  +
Sbjct: 571 YEKAIKDYNKALEINPQHPY 590



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 67/124 (54%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI  +++ ++ +P    A   RG      +E + AI D+ +A++ NP   +A+  R
Sbjct: 468 EYDKAIKDYNKAIEINPQNAIAYNNRGYVYHNLKEYDKAIKDYNKALEINPQYADAYYTR 527

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L E  +AI+D +KA+E  P  AD  + RG+V    KD+  A++D +  ++++ +
Sbjct: 528 GNVYLHLKEYDKAIKDYNKAIEINPQYADAYNNRGVVYEILKDYEKAIKDYNKALEINPQ 587

Query: 516 NKSA 519
           +  A
Sbjct: 588 HPYA 591


>gi|384207675|ref|YP_005593395.1| hypothetical protein Bint_0181 [Brachyspira intermedia PWS/A]
 gi|343385325|gb|AEM20815.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 257

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 127/222 (57%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           +R+ + AI  F +AI+ +P+    +  RG  +  LG+  EAI+D  KA+E  PN +D  +
Sbjct: 16  ERKYKEAIESFDKAIELDPNNSNTYYNRGITKVNLGQYEEAIKDYDKAIELNPNDSDTYN 75

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RGI  +    +  A++D    ++LD  +  +Y   G+A  ++G+YK+A + + KAI+LD
Sbjct: 76  NRGIAKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYDKAIELD 135

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            N+  A+ +     ++L   E+A++   + + +D   S AY+ RGL    LGQ+K+AIKD
Sbjct: 136 HNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQYKEAIKD 195

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
               + ++PS  +    R      +G+Y++A+KDY  AL+L+
Sbjct: 196 FDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALELD 237



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 120/228 (52%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+    E KY  AI  FD+ ++ DP        RG  +    + E AI D+ +AI+ NP+
Sbjct: 10  GLNYFKERKYKEAIESFDKAIELDPNNSNTYYNRGITKVNLGQYEEAIKDYDKAIELNPN 69

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             + +  RG A+  LG+  EAI+D  KA+E + N +D  + RGI       +  A++D  
Sbjct: 70  DSDTYNNRGIAKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYD 129

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++LD    SAY+  G+A  ++G Y++A + + KAI+LD N   A+ +       L   
Sbjct: 130 KAIELDHNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQY 189

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           ++A++   + + ++  +S  Y+ RG+    LGQ+K A+KD    L +D
Sbjct: 190 KEAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALELD 237



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 89/162 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+ N G+Y  AI  +D+ ++ D    ++   RG A+    + + AI D+ +AI+ +
Sbjct: 76  NRGIAKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYDKAIELD 135

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +   A+  RG A+  LG   EAI+D  KA+E + N ++  + RG+       +  A++D
Sbjct: 136 HNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQYKEAIKD 195

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
               ++L+      Y   G++  ++G+YK A + + KA++LD
Sbjct: 196 FDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALELD 237



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 34/196 (17%)

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           EAI+   KA+E +PN+++  + RGI       +  A++D    ++L+  +   Y   G+A
Sbjct: 21  EAIESFDKAIELDPNNSNTYYNRGITKVNLGQYEEAIKDYDKAIELNPNDSDTYNNRGIA 80

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
             ++G+Y++A + + KAI+LD N                                   S 
Sbjct: 81  KYNLGQYQEAIKDYDKAIELDSND----------------------------------SD 106

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           +Y+ RG+    LGQ+K+AIKD    + +D +       R      +G Y EAIKDYD A+
Sbjct: 107 SYNNRGIAKKNLGQYKEAIKDYDKAIELDHNYSSAYSNRGIAKKNLGLYEEAIKDYDKAI 166

Query: 647 DLELDSMEKFVLQCLA 662
           +L+ +    +  + LA
Sbjct: 167 ELDTNDSNAYNNRGLA 182



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 11/128 (8%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLL 63
           ++Y L +  + I + D+ + +DS  + +   R I    L     +++++ KAI  LD   
Sbjct: 80  AKYNLGQYQEAIKDYDKAIELDSNDSDSYNNRGIAKKNLGQYKEAIKDYDKAIE-LDHNY 138

Query: 64  AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           + +Y      NR      L L++  I+D DKA++LD     AY  +G A  +LG+ +EA+
Sbjct: 139 SSAY-----SNRGIAKKNLGLYEEAIKDYDKAIELDTNDSNAYNNRGLAKGSLGQYKEAI 193

Query: 124 SVWEKGYE 131
             ++K  E
Sbjct: 194 KDFDKSIE 201



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 11/124 (8%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSL-----RNWSKAIRILDSLLAQSY 67
           L +  + I + D+ + +D   +SA + R    K   L     +++ KAI  LD+  + +Y
Sbjct: 118 LGQYKEAIKDYDKAIELDHNYSSAYSNRGIAKKNLGLYEEAIKDYDKAIE-LDTNDSNAY 176

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
                 NR      L  +K  I+D DK+++L+P+    Y  +G +   LG+ ++AL  ++
Sbjct: 177 -----NNRGLAKGSLGQYKEAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYK 231

Query: 128 KGYE 131
           K  E
Sbjct: 232 KALE 235


>gi|354569225|ref|ZP_08988381.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353538880|gb|EHC08390.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 666

 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 160/306 (52%), Gaps = 6/306 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG+       Y +AI+ +++ LK +P   +A + RG AR   ++++ A++D+ +A
Sbjct: 310 DAYYNRGLVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQA 369

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++ NP+  + +  RG AR+A G+   A+ D ++A++F PN     + RG+  ++  D   
Sbjct: 370 LKINPNYDKGYYNRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRYELGDKQG 429

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            ++D +  +K++     AY   G+ALS  G+ +KA +   + I+L  ++ +A+ +     
Sbjct: 430 EIDDYNQAIKINPNYALAYYNRGIALSEKGDTQKALDDFNQTIKLRPDYTDAYIYRGLTL 489

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            DL N + A     Q + +   + KAY+ RGL  + LG  + AI D +  L I+P     
Sbjct: 490 YDLGNKQGAFNDFNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITDYNQALKINPKYANA 549

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY-----QKEIALYT-ASK 675
              R      +G+ + AI DY+ AL  + D  + +  + +A++     Q+ +A +  A K
Sbjct: 550 YLNRGLTRADLGDRQGAIADYNQALKYKPDYDKAYYNRGIAYFDLKNLQQALADFNQAIK 609

Query: 676 INSEFC 681
           INS++ 
Sbjct: 610 INSKYA 615



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 146/293 (49%), Gaps = 10/293 (3%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI+ + Q ++ +P Y  A   RG AR+   + + AI+D+T+ ++ NP   +A+  RG
Sbjct: 257 YQGAIANYTQAIRLNPRYANAYYNRGIARSDIGDKQGAIADYTQTVKINPRHDDAYYNRG 316

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                L     AI D +++L+  PN+ D    RG+  ++ KD   A+ D +  +K++   
Sbjct: 317 LVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQALKINPNY 376

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECL 574
              Y   GLA S+ G+ K A   + +AI+ + N+ +A+ +  LT++  +L + +  ++  
Sbjct: 377 DKGYYNRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRY--ELGDKQGEIDDY 434

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + I+  ++ AY+ RG+ L   G  +KA+ D +  + + P   +    R    + +G 
Sbjct: 435 NQAIKINPNYALAYYNRGIALSEKGDTQKALDDFNQTIKLRPDYTDAYIYRGLTLYDLGN 494

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFY-----QKEIALYT-ASKINSEFC 681
            + A  D++ A+ L  +  + +  + L  Y     Q  I  Y  A KIN ++ 
Sbjct: 495 KQGAFNDFNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITDYNQALKINPKYA 547



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 125/241 (51%), Gaps = 10/241 (4%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++ + AI+++T+AI+ NP    A+  RG AR+ +G+   AI D ++ ++  P   D  + 
Sbjct: 255 KDYQGAIANYTQAIRLNPRYANAYYNRGIARSDIGDKQGAIADYTQTVKINPRHDDAYYN 314

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG+V ++ K++ AA+ D +  +K++   + AY   GLA   + + + A   + +A++++ 
Sbjct: 315 RGLVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQALKINP 374

Query: 549 NFLEAWGHLTQFYQDLANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
           N+ + +     + + LA S     + AL    Q +  +  + KAY+ RGL  + LG  + 
Sbjct: 375 NYDKGY-----YNRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRYELGDKQG 429

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            I D +  + I+P+     Y R       G+ ++A+ D++  + L  D  + ++ + L  
Sbjct: 430 EIDDYNQAIKINPNYALAYYNRGIALSEKGDTQKALDDFNQTIKLRPDYTDAYIYRGLTL 489

Query: 664 Y 664
           Y
Sbjct: 490 Y 490



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 126/263 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+   G    A++ ++Q +K +P Y +A   RG  R    + +  I D+ +AI+ N
Sbjct: 382 NRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRYELGDKQGEIDDYNQAIKIN 441

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG A +  G++ +A+ D ++ ++  P+  D    RG+  +   +   A  D
Sbjct: 442 PNYALAYYNRGIALSEKGDTQKALDDFNQTIKLRPDYTDAYIYRGLTLYDLGNKQGAFND 501

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +KL      AY   GL    +G+ + A   + +A++++  +  A+ +      DL 
Sbjct: 502 FNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITDYNQALKINPKYANAYLNRGLTRADLG 561

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q L     + KAY+ RG+    L   ++A+ D +  + I+       Y R
Sbjct: 562 DRQGAIADYNQALKYKPDYDKAYYNRGIAYFDLKNLQQALADFNQAIKINSKYANAYYNR 621

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
           A     +G+ + A+ D+  A +L
Sbjct: 622 ALTRRDLGDKKGALADFKQAAEL 644



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 5/177 (2%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D  + RG+   + G    A + F+Q +K  P Y +A   RG  R    + + AI+D+ +
Sbjct: 479 TDAYIYRGLTLYDLGNKQGAFNDFNQAIKLSPNYDKAYYNRGLTRYELGDKQGAITDYNQ 538

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A++ NP    A+  RG  RA LG+   AI D ++AL+++P+     + RGI  F  K+  
Sbjct: 539 ALKINPKYANAYLNRGLTRADLGDRQGAIADYNQALKYKPDYDKAYYNRGIAYFDLKNLQ 598

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA-----EEAHLKAIQLDRNFLE 552
            A+ D +  +K++ +  +AY    L    +G+ K A     + A L   Q + N+ E
Sbjct: 599 QALADFNQAIKINSKYANAYYNRALTRRDLGDKKGALADFKQAAELYRQQNNNNYYE 655



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 6/194 (3%)

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           ++ KD+  A+ + +  ++L+    +AY   G+A S IG+ + A   + + ++++    +A
Sbjct: 252 YRNKDYQGAIANYTQAIRLNPRYANAYYNRGIARSDIGDKQGAIADYTQTVKINPRHDDA 311

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           + +    Y +L N + A+    + L I+     AY  RGL  + L   + A+ D +  L 
Sbjct: 312 YYNRGLVYYELKNYQAAIADYNESLKINPNAEDAYLNRGLARYELKDIQGAMADYNQALK 371

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY-----QKEI 668
           I+P+  +  Y R     A G+ + A+ DY+ A+    +  + +  + L  Y     Q EI
Sbjct: 372 INPNYDKGYYNRGLARSASGDKKGALADYNQAIKFNPNYDKAYYNRGLTRYELGDKQGEI 431

Query: 669 ALYT-ASKINSEFC 681
             Y  A KIN  + 
Sbjct: 432 DDYNQAIKINPNYA 445


>gi|403338793|gb|EJY68640.1| TPR Domain containing protein [Oxytricha trifallax]
          Length = 979

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 154/317 (48%), Gaps = 22/317 (6%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+G A   +G Y  AI  + + L+  P + +AL  RG A     E + AI D+++AI  +
Sbjct: 551 SQGYAARKKGDYQQAIDFYSKALQIMPNHFKALFNRGFAYDKVGEFDLAIQDYSQAISID 610

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    +  +G +    G+  EAI+  SKA++ EP  AD  H RG    K +DF +A++D
Sbjct: 611 PNNAFTYYNKGISLDRKGDFDEAIKSFSKAIDLEPGKADFYHNRGFAFRKKRDFMSAIKD 670

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  +++D ++  A+         I +  +AE+ +L AI++    + A  HL    + + 
Sbjct: 671 YSTAIQIDNQHFKAFYNRAFCWDKIAKLDEAEKDYLHAIKMQPQNISALHHLGTIREKMG 730

Query: 566 NS--EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
                 ALE   +VL +DK ++ +Y+ RGL+       ++AI D +  + +D  N    +
Sbjct: 731 GDRLNLALENFNEVLELDKNYAPSYNGRGLVWDRFFNFEEAINDFTKAIDLDSQNAVYWH 790

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL--------------QCLAFYQKEIA 669
            RA C+  +G+  ++IKD+D A  +ELDS    +               Q +  Y  EI 
Sbjct: 791 NRACCFRNMGQMDKSIKDFDKA--IELDSTNSIIYSNRGLVNRKLERFEQSIEDYSNEIK 848

Query: 670 LYTASKI----NSEFCW 682
              A+ I    N  +C+
Sbjct: 849 YGPANNIKAFNNRAYCY 865



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 39/254 (15%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTA--RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
           A+  F+++L+ D  Y  +  GRG    R F    E AI+DFT+AI  +      W  R  
Sbjct: 737 ALENFNEVLELDKNYAPSYNGRGLVWDRFF--NFEEAINDFTKAIDLDSQNAVYWHNRAC 794

Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
               +G+  ++I+D  KA+E +  ++ I   RG+VN K + F  ++ED S  +K    N 
Sbjct: 795 CFRNMGQMDKSIKDFDKAIELDSTNSIIYSNRGLVNRKLERFEQSIEDYSNEIKYGPANN 854

Query: 518 -SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A+       + +G+Y +A   + + IQLD   + A                       
Sbjct: 855 IKAFNNRAYCYAKLGQYSEAIRDYSRVIQLDGENIHAL---------------------- 892

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
                       H RG+    L Q+K+AIKD +  + IDP N    + R  CY ++GE  
Sbjct: 893 ------------HNRGISYERLSQYKEAIKDFTRVIEIDPDNANAYFNRGCCYDSVGELD 940

Query: 637 EAIKDYDAALDLEL 650
            AI DY  AL+L++
Sbjct: 941 LAISDYSVALELDM 954



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 3/279 (1%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            DF  +RG A   +  + SAI  +   ++ D  + +A   R        +L+ A  D+  
Sbjct: 648 ADFYHNRGFAFRKKRDFMSAIKDYSTAIQIDNQHFKAFYNRAFCWDKIAKLDEAEKDYLH 707

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVE--AIQDLSKALEFEPNSADILHERGIVNFKFKD 498
           AI+  P    A    G  R  +G      A+++ ++ LE + N A   + RG+V  +F +
Sbjct: 708 AIKMQPQNISALHHLGTIREKMGGDRLNLALENFNEVLELDKNYAPSYNGRGLVWDRFFN 767

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           F  A+ D +  + LD +N   +        ++G+  K+ +   KAI+LD      + +  
Sbjct: 768 FEEAINDFTKAIDLDSQNAVYWHNRACCFRNMGQMDKSIKDFDKAIELDSTNSIIYSNRG 827

Query: 559 QFYQDLANSEKALECL-QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              + L   E+++E    ++ Y      KA++ R      LGQ+ +AI+D S  + +D  
Sbjct: 828 LVNRKLERFEQSIEDYSNEIKYGPANNIKAFNNRAYCYAKLGQYSEAIRDYSRVIQLDGE 887

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           NI  L+ R   Y  + +Y+EAIKD+   ++++ D+   +
Sbjct: 888 NIHALHNRGISYERLSQYKEAIKDFTRVIEIDPDNANAY 926



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 21/194 (10%)

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
           K+    +   G A    G+Y++A + + KA+Q+  N  +A  +    Y  +   + A++ 
Sbjct: 543 KQQAEVFHSQGYAARKKGDYQQAIDFYSKALQIMPNHFKALFNRGFAYDKVGEFDLAIQD 602

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             Q + ID   +  Y+ +G+ L   G   +AIK  S  + ++P   +  + R   +    
Sbjct: 603 YSQAISIDPNNAFTYYNKGISLDRKGDFDEAIKSFSKAIDLEPGKADFYHNRGFAFRKKR 662

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLF 693
           ++  AIKDY  A+ ++    +       AFY            N  FCW  I   +D   
Sbjct: 663 DFMSAIKDYSTAIQIDNQHFK-------AFY------------NRAFCWDKI-AKLDEAE 702

Query: 694 KEYW-CKRLHPKNV 706
           K+Y    ++ P+N+
Sbjct: 703 KDYLHAIKMQPQNI 716



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)

Query: 49  LRNWSKAIRILDSLLAQSYE-IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           L  +S+AIR    ++    E I  + NR   Y +L  +K  I+D  + +++DP    AY 
Sbjct: 868 LGQYSEAIRDYSRVIQLDGENIHALHNRGISYERLSQYKEAIKDFTRVIEIDPDNANAYF 927

Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
            +GC + ++G  + A+S +    E
Sbjct: 928 NRGCCYDSVGELDLAISDYSVALE 951



 Score = 43.9 bits (102), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 12/124 (9%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           NE KY  A +I            +A   R    A   +   AI D++  IQ +     A 
Sbjct: 845 NEIKYGPANNI------------KAFNNRAYCYAKLGQYSEAIRDYSRVIQLDGENIHAL 892

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             RG +   L +  EAI+D ++ +E +P++A+    RG       + + A+ D S  ++L
Sbjct: 893 HNRGISYERLSQYKEAIKDFTRVIEIDPDNANAYFNRGCCYDSVGELDLAISDYSVALEL 952

Query: 513 DKEN 516
           D  N
Sbjct: 953 DMRN 956



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 10/116 (8%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSY 67
           + +  K+I + D+ + +DS  +   + R  + +       S+ ++S  I+        + 
Sbjct: 799 MGQMDKSIKDFDKAIELDSTNSIIYSNRGLVNRKLERFEQSIEDYSNEIK-----YGPAN 853

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
            I+   NRA+CY++L  +   IRD  + +QLD   + A   +G ++  L + +EA+
Sbjct: 854 NIKAFNNRAYCYAKLGQYSEAIRDYSRVIQLDGENIHALHNRGISYERLSQYKEAI 909


>gi|218437459|ref|YP_002375788.1| hypothetical protein PCC7424_0454 [Cyanothece sp. PCC 7424]
 gi|218170187|gb|ACK68920.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 357

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 159/312 (50%), Gaps = 3/312 (0%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
           ++   SN A    +  V  ++ +K+   +F  ++G++ + + KY  A+  F+Q L  +P 
Sbjct: 9   VMASPSNHANLRPELLV--VANNKASETEF-YNQGVSLLKQKKYQEALKQFNQALNINPN 65

Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
           Y +A   RG      ++ + A +D+  A+Q +    EA+  RG  R ALG  + A+ D +
Sbjct: 66  YTQAYTKRGLTYYHLKQYQEAFNDYNRAVQLDAKFPEAYTYRGLLRHALGNDIGALTDYN 125

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           +A+E + N A+  + RG+ +    D   A++D +  + L+ +   AY   G+A S  G+Y
Sbjct: 126 RAIEIKSNYAEAYNYRGVSHLALSDHQNAIKDYTQAIALNPKYAEAYNNRGVAHSIAGDY 185

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
            KA E + KAIQLD N+ +A+ +       L     A+      L +D + S  Y+ RG+
Sbjct: 186 AKAMEDYSKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDYNHALELDSQDSSIYYNRGI 245

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
             + L +++KAI D S  +  DP++    + RA     + + + A+ DY+ A+  + D  
Sbjct: 246 AYYQLKEYQKAIADYSEVIKRDPNSPNTYFSRAVARQQLKDAQGALDDYNLAITKKTDYA 305

Query: 654 EKFVLQCLAFYQ 665
           + +  + L FYQ
Sbjct: 306 DAYFNRGLLFYQ 317



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 112/222 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+ +   G    A++ +++ ++    Y EA   RG +     + + AI D+T+AI  NP
Sbjct: 107 RGLLRHALGNDIGALTDYNRAIEIKSNYAEAYNYRGVSHLALSDHQNAIKDYTQAIALNP 166

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EA+  RG A +  G+  +A++D SKA++ + N       RGI   +  ++ AA+ D 
Sbjct: 167 KYAEAYNNRGVAHSIAGDYAKAMEDYSKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDY 226

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++LD ++ S Y   G+A   + EY+KA   + + I+ D N    +       Q L +
Sbjct: 227 NHALELDSQDSSIYYNRGIAYYQLKEYQKAIADYSEVIKRDPNSPNTYFSRAVARQQLKD 286

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           ++ AL+     +     ++ AY  RGLL + +G   K ++DL
Sbjct: 287 AQGALDDYNLAITKKTDYADAYFNRGLLFYQVGNQSKFVEDL 328



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A    G YA A+  + + ++ D  Y +A   RG  +A   E  AAI D+  A++ +
Sbjct: 174 NRGVAHSIAGDYAKAMEDYSKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDYNHALELD 233

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                 +  RG A   L E  +AI D S+ ++ +PNS +    R +   + KD   A++D
Sbjct: 234 SQDSSIYYNRGIAYYQLKEYQKAIADYSEVIKRDPNSPNTYFSRAVARQQLKDAQGALDD 293

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            +  +    +   AY   GL    +G   K  E   KA  L
Sbjct: 294 YNLAITKKTDYADAYFNRGLLFYQVGNQSKFVEDLEKAASL 334



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 5/142 (3%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           SK+I +D   +     RGI +   G+Y +AI  ++  L+ D         RG A    +E
Sbjct: 193 SKAIQLDSNYTQAYKNRGITKAQLGEYLAAIIDYNHALELDSQDSSIYYNRGIAYYQLKE 252

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+D++E I+ +P++   +  R  AR  L ++  A+ D + A+  + + AD    RG
Sbjct: 253 YQKAIADYSEVIKRDPNSPNTYFSRAVARQQLKDAQGALDDYNLAITKKTDYADAYFNRG 312

Query: 491 IVNFKFKDFNAAVEDLSACVKL 512
           ++ ++  + +  VEDL     L
Sbjct: 313 LLFYQVGNQSKFVEDLEKAASL 334


>gi|422338995|ref|ZP_16419955.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. polymorphum F0401]
 gi|355372122|gb|EHG19465.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. polymorphum F0401]
          Length = 652

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 132/264 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  + GK+  AI  +++ +  +P        RGT      + E AI D+ + I  N
Sbjct: 83  NRGNAYFSLGKFEDAIQDYNKAIDLNPNNASYYNNRGTTFTNLEKYEDAIQDYNKTIDLN 142

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG A   L E  +AI D +KA++  PN       RG       ++  A+ D
Sbjct: 143 PNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLNPNDDSAYFNRGTAFTNLSNYEKAIND 202

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + L+  N S Y Y G    + G Y +A +   KAI+L+  F+  + +L   Y +L 
Sbjct: 203 FNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKDFSKAIELNPIFVFGYSNLGSLYNNLN 262

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + EKA+E L + + +D  FS AY++RG+      +  +A+KD S  + ++P++ E  Y  
Sbjct: 263 DYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQEKFDEAVKDFSKAIELNPNDKEYYYNL 322

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
              Y  +  Y +AI+  + A+DL+
Sbjct: 323 GILYIDLNNYEKAIETLNKAIDLD 346



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 147/311 (47%), Gaps = 35/311 (11%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI-GRGTARAFQRELEAAISDFT 439
           +++  +RG    + GK+  AI  +D+ ++ D          RG A     + E AI D+ 
Sbjct: 9   LNYYYNRGDTFFDLGKFEDAIQNYDKAIELDSNVNSVYYYNRGNAYFSLGKFEEAIQDYN 68

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI  NP+   ++  RG A  +LG+  +AIQD +KA++  PN+A   + RG      + +
Sbjct: 69  KAIDLNPNDDLSYSNRGNAYFSLGKFEDAIQDYNKAIDLNPNNASYYNNRGTTFTNLEKY 128

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A++D +  + L+  +  AY   G A + + EY+KA     KAI L+ N   A+ +   
Sbjct: 129 EDAIQDYNKTIDLNPNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLNPNDDSAYFNRGT 188

Query: 560 FYQDLANSEKALECLQQ----------------VLYID--------KRFSKAYHLRGLLL 595
            + +L+N EKA+    +                 LYI+        K FSKA  L  + +
Sbjct: 189 AFTNLSNYEKAINDFNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKDFSKAIELNPIFV 248

Query: 596 HG----------LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            G          L  ++KAI++L+  + +DP+  +   +R   Y    ++ EA+KD+  A
Sbjct: 249 FGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQEKFDEAVKDFSKA 308

Query: 646 LDLELDSMEKF 656
           ++L  +  E +
Sbjct: 309 IELNPNDKEYY 319



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 120/232 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    N  KY  AI  +++ +  +P    A   RG A  +  E E AI+DF +AI  N
Sbjct: 117 NRGTTFTNLEKYEDAIQDYNKTIDLNPNDNYAYFNRGAAFTYLNEYEKAINDFNKAIDLN 176

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG A   L    +AI D +KA++   N+A   + RG +     +++ AV+D
Sbjct: 177 PNDDSAYFNRGTAFTNLSNYEKAINDFNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKD 236

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  ++L+      Y+ LG   +++ +Y+KA E   KAI LD NF +A+      Y +  
Sbjct: 237 FSKAIELNPIFVFGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQE 296

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             ++A++   + + ++    + Y+  G+L   L  ++KAI+ L+  + +DP+
Sbjct: 297 KFDEAVKDFSKAIELNPNDKEYYYNLGILYIDLNNYEKAIETLNKAIDLDPN 348



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 87/169 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG A  N   Y  AI+ F++ +  +         RGT    Q   + A+ DF++AI+ 
Sbjct: 184 FNRGTAFTNLSNYEKAINDFNKAIDLNSNNASYYNYRGTLYINQGNYDEAVKDFSKAIEL 243

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP     +   G     L +  +AI++L+KA++ +PN +D  + RGI     + F+ AV+
Sbjct: 244 NPIFVFGYSNLGSLYNNLNDYEKAIENLNKAIDLDPNFSDAYNIRGITYVNQEKFDEAVK 303

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           D S  ++L+  +K  Y  LG+    +  Y+KA E   KAI LD NF +A
Sbjct: 304 DFSKAIELNPNDKEYYYNLGILYIDLNNYEKAIETLNKAIDLDPNFSDA 352


>gi|374812493|ref|ZP_09716230.1| hypothetical protein TpriZ_01350 [Treponema primitia ZAS-1]
          Length = 343

 Score =  134 bits (338), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 87/306 (28%), Positives = 159/306 (51%), Gaps = 6/306 (1%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           + ++S +  ++RGI   ++  Y SAI  ++Q ++ +P  PEA   RG+A A + E   A+
Sbjct: 24  ADNLSYNEYINRGILYADQKNYDSAIGYYNQAIRLNPNLPEAYNNRGSAYAVKGEQVWAL 83

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           +DFTEAI+  P+   A+  RG      G+   A+ D S+A+  +P  A     RG    +
Sbjct: 84  ADFTEAIRLKPNYTFAYNNRGLLHIERGDYERALSDFSQAILIDPGYAKAYRNRGDAWVQ 143

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
             ++  A+ D    ++L      AY   G A ++ GEY KA   + +AI+++ N+ EA+ 
Sbjct: 144 KGEYERAISDYDQAIRLSPSYAMAYGSRGNAYANRGEYDKAAADYNQAIRINPNYAEAYI 203

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRF----SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +    Y D+  + + LE   +VL I+  +    +K+Y  RGL  + +G++++A+ D +  
Sbjct: 204 NRGNIYYDIGYTNRGLEDYTRVLDINLSYGPDLAKSYANRGLAYNNMGEYRRALTDYNEA 263

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           + + P+       R   Y  +GEY  AI+D+  A+ L  +    ++ +  A+ QK   LY
Sbjct: 264 IKLRPNLAVVFRHRGVSYTNLGEYDLAIEDFTHAIILNPNYALAYINRGNAYSQK--GLY 321

Query: 672 TASKIN 677
             ++I+
Sbjct: 322 DQARID 327



 Score =  102 bits (255), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 4/235 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+  +  G Y  A+S F Q +  DP Y +A   RG A   + E E AISD+ +AI+ +
Sbjct: 102 NRGLLHIERGDYERALSDFSQAILIDPGYAKAYRNRGDAWVQKGEYERAISDYDQAIRLS 161

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           PS   A+  RG A A  GE  +A  D ++A+   PN A+    RG + +     N  +ED
Sbjct: 162 PSYAMAYGSRGNAYANRGEYDKAAADYNQAIRINPNYAEAYINRGNIYYDIGYTNRGLED 221

Query: 506 LSACVKLD----KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            +  + ++     +   +Y   GLA +++GEY++A   + +AI+L  N    + H    Y
Sbjct: 222 YTRVLDINLSYGPDLAKSYANRGLAYNNMGEYRRALTDYNEAIKLRPNLAVVFRHRGVSY 281

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
            +L   + A+E     + ++  ++ AY  RG      G + +A  D    + I+P
Sbjct: 282 TNLGEYDLAIEDFTHAIILNPNYALAYINRGNAYSQKGLYDQARIDYHQAVRINP 336



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 4/208 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A V +G+Y  AIS +DQ ++  P Y  A   RG A A + E + A +D+ +AI+ N
Sbjct: 136 NRGDAWVQKGEYERAISDYDQAIRLSPSYAMAYGSRGNAYANRGEYDKAAADYNQAIRIN 195

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE----FEPNSADILHERGIVNFKFKDFNA 501
           P+  EA+  RG     +G +   ++D ++ L+    + P+ A     RG+      ++  
Sbjct: 196 PNYAEAYINRGNIYYDIGYTNRGLEDYTRVLDINLSYGPDLAKSYANRGLAYNNMGEYRR 255

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  +KL       + + G++ +++GEY  A E    AI L+ N+  A+ +    Y
Sbjct: 256 ALTDYNEAIKLRPNLAVVFRHRGVSYTNLGEYDLAIEDFTHAIILNPNYALAYINRGNAY 315

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYH 589
                 ++A     Q + I+ ++   Y+
Sbjct: 316 SQKGLYDQARIDYHQAVRINPKYGAIYY 343


>gi|220922451|ref|YP_002497753.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947058|gb|ACL57450.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 1022

 Score =  134 bits (336), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 145/282 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG A  N+G+   AI+ ++Q L+ +P Y  A   RG A   + E + AI+D+ +AI+ 
Sbjct: 336 VNRGDAFRNKGENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRL 395

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P +  A+  RG A  + GE   AI D ++AL+  P SA     RG V     +++ A+ 
Sbjct: 396 DPKSAIAYNNRGFALQSKGEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIA 455

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++ D +   AYT  G    S GEY +A   + +AIQL+  ++ A+ +     Q+ 
Sbjct: 456 DYDLALQFDPKYAIAYTNRGDVFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNK 515

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+    Q L ++ R+  AY  RG      G+  +A+ D + GL +D +N+     
Sbjct: 516 GEPDRAIANYDQALQLNPRYIVAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAYNN 575

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           R  C+   GEY  AI DYD AL ++      FV +  AF +K
Sbjct: 576 RGLCFQNRGEYDLAIADYDHALQIDPKYATAFVNRGFAFQKK 617



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 146/292 (50%), Gaps = 5/292 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG +  N+G+Y  AI+ ++Q L+ DP    A + RG     + E + AI+D+ +A++ +
Sbjct: 31  TRGYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDRAIADYNQALRLD 90

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +  A+  RG A    G+   AI D ++AL+ +P    + + RG       +++ A+ D
Sbjct: 91  PRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAIAD 150

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD     AY   G A    GEY +A   + +A++LD  +  A+ +    ++   
Sbjct: 151 YNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKG 210

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +A+    Q L  D +   AY+ RGL    +G++ +AI D +  L ++P  +  +  R
Sbjct: 211 EYNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNR 270

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT 672
           A  +   GEY  AI DYD AL L  +    +  + LAF     Y + IA Y+
Sbjct: 271 ADAFRIKGEYDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIADYS 322



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 146/291 (50%), Gaps = 5/291 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  ++G Y  AI+ +++ L+ DP +P     RG A   + E + AI+D+ +A+Q +
Sbjct: 99  NRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRAIADYNQALQLD 158

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG A    GE   AI D S+AL  +P  A     RG V     ++N A+ D
Sbjct: 159 PNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKGEYNRAIAD 218

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++ D +   AY   GLA  ++GEY +A   + +A++L+  ++ A  +    ++   
Sbjct: 219 YNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKG 278

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    Q L+++  ++ AY+ RGL     G++ +AI D S  L +DP  +     R
Sbjct: 279 EYDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNR 338

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
              +   GE   AI DY+ AL L       +  + LAF     Y + IA Y
Sbjct: 339 GDAFRNKGENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADY 389



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 144/295 (48%), Gaps = 3/295 (1%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R++ S S + +   +RG+A  N+G+Y  AI+ ++Q ++ DP    A   RG A   + E 
Sbjct: 360 RLNPSYSTAYN---TRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSKGEY 416

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AI+D+ +A+Q NP +   +  RG    + GE   AI D   AL+F+P  A     RG 
Sbjct: 417 DRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQFDPKYAIAYTNRGD 476

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V     +++ A+ +    ++L+ +   AY   GLAL + GE  +A   + +A+QL+  ++
Sbjct: 477 VFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRAIANYDQALQLNPRYI 536

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A+ +    ++     ++A+    Q L +D     AY+ RGL     G++  AI D    
Sbjct: 537 VAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAYNNRGLCFQNRGEYDLAIADYDHA 596

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           L IDP        R   +    EY  AI DYD AL L+  S   +  +  AF  K
Sbjct: 597 LQIDPKYATAFVNRGFAFQKKSEYDRAIADYDRALQLDPKSAVAYNNRGFAFQSK 651



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 152/329 (46%), Gaps = 12/329 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N G+Y  AIS + + L+ +P Y  A++ R  A   + E + AI D+ +A+  N
Sbjct: 235 NRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKGEYDRAIVDYDQALHLN 294

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN-AAVE 504
           P+   A+  RG A    GE   AI D S+AL  +P        RG   F+ K  N  A+ 
Sbjct: 295 PNYAIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNRGDA-FRNKGENDVAIA 353

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++L+    +AY   GLA  + GEY +A   + +AI+LD     A+ +     Q  
Sbjct: 354 DYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLDPKSAIAYNNRGFALQSK 413

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+    Q L ++ + +  Y  RG +    G++ +AI D    L  DP        
Sbjct: 414 GEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDLALQFDPKYAIAYTN 473

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           R   + + GEY  AI +YD A+ L      K+V   +A+  + +AL    + +     +D
Sbjct: 474 RGDVFRSKGEYDRAIANYDQAIQLN----PKYV---VAYNNRGLALQNKGEPDRAIANYD 526

Query: 685 IDGDIDPLFKEYWCKR---LHPKNVCEKV 710
               ++P +   +  R      K  C++ 
Sbjct: 527 QALQLNPRYIVAYINRGDAFRSKGECDRA 555



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 136/305 (44%), Gaps = 48/305 (15%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A   +G+Y  AI+ + Q L+ DP Y  A   RG     + E   AI+D+ +A+Q +
Sbjct: 167 NRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFRSKGEYNRAIADYNQALQFD 226

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFKD 498
           P    A+  RG A   +GE   AI D ++AL  EP       N AD    +G       +
Sbjct: 227 PKPIIAYNNRGLAFQNMGEYDRAISDYTEALRLEPKYVIAVVNRADAFRIKG-------E 279

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           ++ A+ D    + L+     AY   GLA  + GEY +A   + +A++LD  ++ A+ +  
Sbjct: 280 YDRAIVDYDQALHLNPNYAIAYNNRGLAFQNKGEYDRAIADYSQALRLDPKYVIAFVNRG 339

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
             +++   ++ A+    Q L ++  +S AY+ RGL     G++ +AI D    + +DP +
Sbjct: 340 DAFRNKGENDVAIADYNQALRLNPSYSTAYNTRGLAFQNKGEYDRAIADYEQAIRLDPKS 399

Query: 619 I------------------------ECLYL----------RASCYHAIGEYREAIKDYDA 644
                                    + L L          R   + + GEY  AI DYD 
Sbjct: 400 AIAYNNRGFALQSKGEYDRAITDYNQALQLNPKSAITYTNRGFVFQSKGEYDRAIADYDL 459

Query: 645 ALDLE 649
           AL  +
Sbjct: 460 ALQFD 464



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 126/264 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    ++G+Y  AI+ +DQ ++ +P Y  A   RG A   + E + AI+++ +A+Q N
Sbjct: 473 NRGDVFRSKGEYDRAIANYDQAIQLNPKYVVAYNNRGLALQNKGEPDRAIANYDQALQLN 532

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A  + GE   A+ D ++ LE + N+    + RG+      +++ A+ D
Sbjct: 533 PRYIVAYINRGDAFRSKGECDRAVSDYNQGLELDHNNVLAYNNRGLCFQNRGEYDLAIAD 592

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++D +  +A+   G A     EY +A   + +A+QLD     A+ +    +Q   
Sbjct: 593 YDHALQIDPKYATAFVNRGFAFQKKSEYDRAIADYDRALQLDPKSAVAYNNRGFAFQSKG 652

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             + A+      L +    + AY+ RG +    G    +I DLS  + ++P   E    R
Sbjct: 653 AYDLAIADYDHALLLKPGLANAYYHRGTVFSFKGNLDHSISDLSEAIRLNPKYAEAYQDR 712

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
              Y A GE   A+ D+  A  L+
Sbjct: 713 GITYQARGEPDRALADFAEAARLK 736



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 120/269 (44%), Gaps = 21/269 (7%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    ++G+Y  AI+ +D  L+ DP Y  A   RG     + E + AI+++ +AIQ N
Sbjct: 439 NRGFVFQSKGEYDRAIADYDLALQFDPKYAIAYTNRGDVFRSKGEYDRAIANYDQAIQLN 498

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFKD 498
           P    A+  RG A    GE   AI +  +AL+  P       N  D    +G  +    D
Sbjct: 499 PKYVVAYNNRGLALQNKGEPDRAIANYDQALQLNPRYIVAYINRGDAFRSKGECDRAVSD 558

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +N  +E       LD  N  AY   GL   + GEY  A   +  A+Q+D  +  A+ +  
Sbjct: 559 YNQGLE-------LDHNNVLAYNNRGLCFQNRGEYDLAIADYDHALQIDPKYATAFVNRG 611

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
             +Q  +  ++A+    + L +D + + AY+ RG      G +  AI D    L + P  
Sbjct: 612 FAFQKKSEYDRAIADYDRALQLDPKSAVAYNNRGFAFQSKGAYDLAIADYDHALLLKPGL 671

Query: 619 IECLYLRASCY-------HAIGEYREAIK 640
               Y R + +       H+I +  EAI+
Sbjct: 672 ANAYYHRGTVFSFKGNLDHSISDLSEAIR 700



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 111/231 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N+G+   AI+ +DQ L+ +P Y  A I RG A   + E + A+SD+ + ++ +
Sbjct: 507 NRGLALQNKGEPDRAIANYDQALQLNPRYIVAYINRGDAFRSKGECDRAVSDYNQGLELD 566

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +   A+  RG      GE   AI D   AL+ +P  A     RG    K  +++ A+ D
Sbjct: 567 HNNVLAYNNRGLCFQNRGEYDLAIADYDHALQIDPKYATAFVNRGFAFQKKSEYDRAIAD 626

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD ++  AY   G A  S G Y  A   +  A+ L      A+ H    +    
Sbjct: 627 YDRALQLDPKSAVAYNNRGFAFQSKGAYDLAIADYDHALLLKPGLANAYYHRGTVFSFKG 686

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           N + ++  L + + ++ ++++AY  RG+     G+  +A+ D +    + P
Sbjct: 687 NLDHSISDLSEAIRLNPKYAEAYQDRGITYQARGEPDRALADFAEAARLKP 737



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 5/227 (2%)

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
            +  RG +    GE   AI D ++AL  +P        RG       +++ A+ D +  +
Sbjct: 28  GYNTRGYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGEYDRAIADYNQAL 87

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           +LD  +  AY   G A    G+Y++A   + +A+QLD      + +    +      ++A
Sbjct: 88  RLDPRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRGFAFHGKGEYDRA 147

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           +    Q L +D  ++ AY+ RG    G G++ +AI D S  L +DP        R   + 
Sbjct: 148 IADYNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYSQALRLDPKYAIAYTNRGDVFR 207

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT 672
           + GEY  AI DY+ AL  +   +  +  + LAF     Y + I+ YT
Sbjct: 208 SKGEYNRAIADYNQALQFDPKPIIAYNNRGLAFQNMGEYDRAISDYT 254



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 8/171 (4%)

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + LD    + Y   G +  + GEY +A   + +A++LD     A+ +    ++    
Sbjct: 19  STALALDA---AGYNTRGYSFQNKGEYDRAIADYNQALRLDPKLTAAYVNRGFTFRSKGE 75

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++A+    Q L +D R   AY+ RG   +  G +++AI D +  L +DP +      R 
Sbjct: 76  YDRAIADYNQALRLDPRSVIAYNNRGDAFYHKGDYERAIADYNRALQLDPKHPIVYNNRG 135

Query: 627 SCYHAIGEYREAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIALYT 672
             +H  GEY  AI DY+ AL L+ +     +   F  Q    Y + IA Y+
Sbjct: 136 FAFHGKGEYDRAIADYNQALQLDPNYTFAYNNRGFAFQGKGEYDRAIADYS 186



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 34/164 (20%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   N G+Y  AI+ +D  L+ DP Y  A + RG A   + E + AI+D+  A+Q +
Sbjct: 575 NRGLCFQNRGEYDLAIADYDHALQIDPKYATAFVNRGFAFQKKSEYDRAIADYDRALQLD 634

Query: 446 PSAGEAWKRRG---QARAAL-------------------------------GESVEAIQD 471
           P +  A+  RG   Q++ A                                G    +I D
Sbjct: 635 PKSAVAYNNRGFAFQSKGAYDLAIADYDHALLLKPGLANAYYHRGTVFSFKGNLDHSISD 694

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           LS+A+   P  A+   +RGI      + + A+ D +   +L  E
Sbjct: 695 LSEAIRLNPKYAEAYQDRGITYQARGEPDRALADFAEAARLKPE 738



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 28/115 (24%)

Query: 72  ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
             NR F + +   +   I D D+ALQLDP    AY  +G AF + G  + A++     Y+
Sbjct: 607 FVNRGFAFQKKSEYDRAIADYDRALQLDPKSAVAYNNRGFAFQSKGAYDLAIA----DYD 662

Query: 132 HAL------------------------HQSADLKQFLELEELLTAAKQDRSVTCE 162
           HAL                        H  +DL + + L      A QDR +T +
Sbjct: 663 HALLLKPGLANAYYHRGTVFSFKGNLDHSISDLSEAIRLNPKYAEAYQDRGITYQ 717


>gi|428320555|ref|YP_007118437.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244235|gb|AFZ10021.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 838

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 145/306 (47%), Gaps = 7/306 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A VN G+   AI+ +D+ L+  P Y EA   RG A       E AI+ + EA++  
Sbjct: 521 NRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAIASWDEALKFK 580

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   +AI    +AL+F+P+  +  + RG+          A+  
Sbjct: 581 PDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGLALVNLGRREDAIAS 640

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +KL  +   A+  LG+ L  +G  + A  ++ KA+++  ++ EAW +      +L 
Sbjct: 641 YGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALEIKPDYHEAWFNQGVVLHNLG 700

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L     + +A++ RGL L  LG+ ++AI      L   P   E  Y+R
Sbjct: 701 RFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAITSWDEALKFKPDKHEAWYIR 760

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
               + +G + EAI  YD AL  + D  E       A+Y + +ALY   +I      +D 
Sbjct: 761 GLVLYNLGRFEEAIASYDKALKFKPDKHE-------AWYIRGLALYNLGRIKEAIASYDK 813

Query: 686 DGDIDP 691
             +I P
Sbjct: 814 ALEIKP 819



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 7/315 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  N G++  AI+  D+ L+  P   E    RG A      LE AI+ + +A++  P
Sbjct: 183 RGLALGNLGRFEEAIASCDKALEIKPDLHEVWNNRGRALDDLGRLEDAIASYDKALKFKP 242

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EAW  RG A   LG   +AI    KAL+F+P+  ++ + RG+       F  A+   
Sbjct: 243 DKHEAWSSRGLALVKLGRLQDAIASYDKALKFKPDKHEVWNIRGLALDDLGRFEEAIASY 302

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +K   +   A+   GLAL ++G  ++A  +  KA+++  +  E W +      DL  
Sbjct: 303 DKALKFKPDLHEAWYIRGLALYNLGRREEAIASWDKALEIKPDLHEVWYNRGYALDDLGR 362

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+AL    + L +   + +A++ RGLLLH LG+ ++A+   +  L + P   E    R 
Sbjct: 363 FEEALTSYNKALELKPDYHEAWNNRGLLLHNLGRFEEALTSYNKALELKPDYHEAWNNRG 422

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
           +    +G   EAI  YD AL+L+ D  E       A+  +  AL    ++      +D  
Sbjct: 423 NALDKLGRIEEAIASYDKALELKPDYHE-------AWNNRGNALRNLGRLEEAIASYDKA 475

Query: 687 GDIDPLFKEYWCKRL 701
            +I P + E W  R+
Sbjct: 476 LEIKPDYHEAWNNRV 490



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 146/310 (47%), Gaps = 13/310 (4%)

Query: 355 LKETSNEAKRNKKFCVTRIS----------KSKSISVDFR---LSRGIAQVNEGKYASAI 401
           +K   +EA  N+ + +  +           K+  I  D+     +RG+A VN G+   AI
Sbjct: 511 IKPDDHEAWNNRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAI 570

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           + +D+ LK  P   EA   RG A       E AI+ + EA++  P   EAW  RG A   
Sbjct: 571 ASWDEALKFKPDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGLALVN 630

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           LG   +AI    KAL+ +P+  +  +  G+V         A+      +++  +   A+ 
Sbjct: 631 LGRREDAIASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALEIKPDYHEAWF 690

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G+ L ++G +++A  +  KA++   ++ EAW        +L   E+A+    + L   
Sbjct: 691 NQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAITSWDEALKFK 750

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
               +A+++RGL+L+ LG+ ++AI      L   P   E  Y+R    + +G  +EAI  
Sbjct: 751 PDKHEAWYIRGLVLYNLGRFEEAIASYDKALKFKPDKHEAWYIRGLALYNLGRIKEAIAS 810

Query: 642 YDAALDLELD 651
           YD AL+++ D
Sbjct: 811 YDKALEIKPD 820



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 126/266 (47%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI+ +D+ L+  P   EA   RG A      +E AI+ + +A++  P   EAW  RG A 
Sbjct: 501 AIASYDKALEIKPDDHEAWNNRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVAL 560

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             LG   +AI    +AL+F+P+  +  + RG+          A+      +K   +   A
Sbjct: 561 VNLGRREDAIASWDEALKFKPDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEA 620

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +   GLAL ++G  + A  ++ KA++L  +F EAW +L     DL   E A+    + L 
Sbjct: 621 WYNRGLALVNLGRREDAIASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALE 680

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I   + +A+  +G++LH LG+ ++AI      L       E  Y R      +G + EAI
Sbjct: 681 IKPDYHEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAI 740

Query: 640 KDYDAALDLELDSMEKFVLQCLAFYQ 665
             +D AL  + D  E + ++ L  Y 
Sbjct: 741 TSWDEALKFKPDKHEAWYIRGLVLYN 766



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 146/314 (46%), Gaps = 8/314 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  + G++  AI+ +D+ LK  P   EA   RG A       E AI+ + +A++  P
Sbjct: 285 RGLALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLALYNLGRREEAIASWDKALEIKP 344

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              E W  RG A   LG   EA+   +KALE +P+  +  + RG++      F  A+   
Sbjct: 345 DLHEVWYNRGYALDDLGRFEEALTSYNKALELKPDYHEAWNNRGLLLHNLGRFEEALTSY 404

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++L  +   A+   G AL  +G  ++A  ++ KA++L  ++ EAW +     ++L  
Sbjct: 405 NKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRGNALRNLGR 464

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+    + L I   + +A++ R LLL  LG+  +AI      L I P + E    R 
Sbjct: 465 LEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGR-IEAIASYDKALEIKPDDHEAWNNRG 523

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
                +G   EAI  +D AL+++ D  E       A+Y + +AL    +       +D  
Sbjct: 524 YALVNLGRIEEAIASWDKALEIKPDYHE-------AWYNRGVALVNLGRREDAIASWDEA 576

Query: 687 GDIDPLFKEYWCKR 700
               P   E W  R
Sbjct: 577 LKFKPDLHEAWYNR 590



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 146/326 (44%), Gaps = 12/326 (3%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +T  +K+  +  D+  +   RG A    G+   AI+ +D+ L+  P Y EA   RG A 
Sbjct: 400 ALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRGNAL 459

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                LE AI+ + +A++  P   EAW  R      LG  +EAI    KALE +P+  + 
Sbjct: 460 RNLGRLEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGR-IEAIASYDKALEIKPDDHEA 518

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG           A+      +++  +   A+   G+AL ++G  + A  +  +A++
Sbjct: 519 WNNRGYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAIASWDEALK 578

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
              +  EAW +      +L   E A+    + L       +A++ RGL L  LG+ + AI
Sbjct: 579 FKPDLHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNRGLALVNLGRREDAI 638

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQC 660
                 L + P   E  Y      H +G   +AI  YD AL+++ D  E +     VL  
Sbjct: 639 ASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALEIKPDYHEAWFNQGVVLHN 698

Query: 661 LAFYQKEIALY-TASKINSEF--CWF 683
           L  +++ IA +  A K  +++   W+
Sbjct: 699 LGRFEEAIASFGKALKFKADYHEAWY 724



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 141/654 (21%), Positives = 258/654 (39%), Gaps = 104/654 (15%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
           L +    I   D+ ++       A ++R + L KL  L++   AI   D  L    +  +
Sbjct: 224 LGRLEDAIASYDKALKFKPDKHEAWSSRGLALVKLGRLQD---AIASYDKALKFKPDKHE 280

Query: 72  ICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
           + N R      L   +  I   DKAL+  P L +A+ ++G A   LGR+EEA++ W+K  
Sbjct: 281 VWNIRGLALDDLGRFEEAIASYDKALKFKPDLHEAWYIRGLALYNLGRREEAIASWDKAL 340

Query: 131 E--HALHQSA--------DLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVS----- 175
           E    LH+          DL +F   EE LT+  +   +  +Y  + +   L +      
Sbjct: 341 EIKPDLHEVWYNRGYALDDLGRF---EEALTSYNKALELKPDYHEAWNNRGLLLHNLGRF 397

Query: 176 ESGLNANDKMSETSENH-----NKSDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAK 229
           E  L + +K  E   ++     N+ +  D   +  +   +  K+    PD     ++   
Sbjct: 398 EEALTSYNKALELKPDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRG- 456

Query: 230 GGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHAS--------RDASEINRQSSDDF 281
                    + L   G+L E   +++ + +     H +         +   I   +S D 
Sbjct: 457 ---------NALRNLGRLEEAIASYDKALEIKPDYHEAWNNRVLLLDNLGRIEAIASYDK 507

Query: 282 DICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS---DNKS 338
            +   P D  + N R G        + + ++S   +L       E++    ++     + 
Sbjct: 508 ALEIKPDDHEAWNNR-GYALVNLGRIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRR 566

Query: 339 SDSTESRSK-LSFKWDMLKETSNEAKRNKKFCVTRISKSKSI------SVDFR------- 384
            D+  S  + L FK D+     +EA  N+   +  + + +        ++ F+       
Sbjct: 567 EDAIASWDEALKFKPDL-----HEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAW 621

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+A VN G+   AI+ + + LK  P + EA    G        +E AI+ + +A++ 
Sbjct: 622 YNRGLALVNLGRREDAIASYGKALKLKPDFHEAWYNLGVVLHDLGRIEDAIASYDKALEI 681

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   EAW  +G     LG   EAI    KAL+F+ +  +  + RG+       F  A+ 
Sbjct: 682 KPDYHEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLALVNLGRFEEAIT 741

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +K   +   A+   GL L ++G +++A  ++ KA++   +  EAW          
Sbjct: 742 SWDEALKFKPDKHEAWYIRGLVLYNLGRFEEAIASYDKALKFKPDKHEAW---------- 791

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                                   ++RGL L+ LG+ K+AI      L I P +
Sbjct: 792 ------------------------YIRGLALYNLGRIKEAIASYDKALEIKPDD 821



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 8/312 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  + G++  A++ +++ L+  P Y EA   RG         E A++ + +A++  
Sbjct: 352 NRGYALDDLGRFEEALTSYNKALELKPDYHEAWNNRGLLLHNLGRFEEALTSYNKALELK 411

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    KALE +P+  +  + RG           A+  
Sbjct: 412 PDYHEAWNNRGNALDKLGRIEEAIASYDKALELKPDYHEAWNNRGNALRNLGRLEEAIAS 471

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +   A+    L L ++G   +A  ++ KA+++  +  EAW +      +L 
Sbjct: 472 YDKALEIKPDYHEAWNNRVLLLDNLGRI-EAIASYDKALEIKPDDHEAWNNRGYALVNLG 530

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L I   + +A++ RG+ L  LG+ + AI      L   P   E  Y R
Sbjct: 531 RIEEAIASWDKALEIKPDYHEAWYNRGVALVNLGRREDAIASWDEALKFKPDLHEAWYNR 590

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                 +G   +AI  +D AL  + D  E       A+Y + +AL    +       +  
Sbjct: 591 GVALVNLGRREDAIASWDEALKFKPDLHE-------AWYNRGLALVNLGRREDAIASYGK 643

Query: 686 DGDIDPLFKEYW 697
              + P F E W
Sbjct: 644 ALKLKPDFHEAW 655



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 3/166 (1%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    K+  I  D+     ++G+   N G++  AI+ F + LK    Y EA   RG A 
Sbjct: 671 AIASYDKALEIKPDYHEAWFNQGVVLHNLGRFEEAIASFGKALKFKADYHEAWYSRGLAL 730

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                 E AI+ + EA++  P   EAW  RG     LG   EAI    KAL+F+P+  + 
Sbjct: 731 VNLGRFEEAITSWDEALKFKPDKHEAWYIRGLVLYNLGRFEEAIASYDKALKFKPDKHEA 790

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            + RG+  +       A+      +++  ++  A     +AL  +G
Sbjct: 791 WYIRGLALYNLGRIKEAIASYDKALEIKPDDHLASKNRTIALKKLG 836


>gi|27502765|gb|AAH42683.1| TTC13 protein, partial [Homo sapiens]
          Length = 502

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 190/421 (45%), Gaps = 81/421 (19%)

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ E IK     +  +  
Sbjct: 1   GMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPL 60

Query: 652 SMEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKV 710
             +K   + L   Y +E + Y  + +++    ++ID D+   FK++W K L    + E  
Sbjct: 61  PGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDY 118

Query: 711 YRQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGL 769
             QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ PGFL N+R HR  GL
Sbjct: 119 EEQPGLQPHIKD--VLHQNFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGL 176

Query: 770 AAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDT 829
           AA+E+ Q V + W         +N     NG     K R+                    
Sbjct: 177 AALEVMQAVQRTW---------TNSKVRMNG-----KTRL-------------------- 202

Query: 830 SSYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMI 888
                          M W+D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I
Sbjct: 203 ---------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLI 247

Query: 889 LGQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL------------SEDVVG-- 934
            GQ   +RY   + + L      +KD+  V++ A++   L             ED++   
Sbjct: 248 RGQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIM 303

Query: 935 -------EDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAE 987
                  + F + T   S   +GK+ +G  IT+         F++ T  T  R   + AE
Sbjct: 304 KFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAE 363

Query: 988 M 988
           +
Sbjct: 364 I 364


>gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424]
 gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 1276

 Score =  133 bits (335), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 149/315 (47%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG       +Y  A+  FD+ L+ +P Y EAL  RG A       + A   + +A++ N
Sbjct: 125 NRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELN 184

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   AW  RG A   L    EA+    KALE  PN+A++   RG+     + +  A++ 
Sbjct: 185 PNNAVAWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQS 244

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +KL+     A+ Y G+AL S+  Y++A EA  KA +L+ N  E+W +     + L 
Sbjct: 245 YEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEKLE 304

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A +   Q + ++   ++A++ RG  L  L ++++A +     + ++P+  E    R
Sbjct: 305 RYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYR 364

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                 +  Y EA + YD A+ L  +  E       A+Y + +AL    +    F ++D 
Sbjct: 365 GLALGNLERYEEAFQSYDQAIKLNPNYAE-------AWYNQGVALGMLERYEEAFQFYDQ 417

Query: 686 DGDIDPLFKEYWCKR 700
              ++P   + W  R
Sbjct: 418 AIKLNPNHAQAWNNR 432



 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 147/290 (50%), Gaps = 5/290 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  N  +Y  A   +DQ +K +P Y EA   +G A       E A   + +AI+ NP
Sbjct: 364 RGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNP 423

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  +AW  RG A   L    EA Q   KA++  PN A+  + +G+   K + +  A++  
Sbjct: 424 NHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSY 483

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +KL+     A+   G+AL  +  Y++A +++ +AI+L+ N+ EAW +      +L  
Sbjct: 484 DQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNRGFALGNLEC 543

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++A +   + + ++   ++A++ RG  L  L ++++A++     + ++P+  E L+ R 
Sbjct: 544 YQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQSYDKAIQLNPNYAEALFNRG 603

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
                +  Y EA + +D A+ L  ++ E +     VL  L  +Q+ IA Y
Sbjct: 604 VALERLERYEEAFQSFDKAIQLNPNNTEAWYNRGVVLGKLERHQEAIASY 653



 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 148/315 (46%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG       +Y  A   FDQ +K +P Y EA   RG A       E A   + +AI+ N
Sbjct: 329 NRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLN 388

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EAW  +G A   L    EA Q   +A++  PN A   + RG+     + +  A + 
Sbjct: 389 PNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQS 448

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +KL+  +  A+   G+AL  +  Y++A +++ +AI+L+ N+ EAW +       L 
Sbjct: 449 FDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLE 508

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++AL+   Q + ++  +++A++ RG  L  L  +++A +     + ++P++ E    R
Sbjct: 509 RYQEALQSYDQAIKLNPNYAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNR 568

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                 +  Y+EA++ YD A+ L  +  E       A + + +AL    +    F  FD 
Sbjct: 569 GFSLRNLERYQEALQSYDKAIQLNPNYAE-------ALFNRGVALERLERYEEAFQSFDK 621

Query: 686 DGDIDPLFKEYWCKR 700
              ++P   E W  R
Sbjct: 622 AIQLNPNNTEAWYNR 636



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 150/314 (47%), Gaps = 7/314 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+   N GK+  A+  F++ L+ +     A   RG A     + E A+S F +A++ NP
Sbjct: 58  QGVVLFNLGKHQEALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNP 117

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA   RG     L    EA+    KALE  PN A+ L  RG+   + + +  A +  
Sbjct: 118 NYAEALSNRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSY 177

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L+  N  A+ Y G+AL  +  Y++A     KA++L+ N  E W +      +L  
Sbjct: 178 DKALELNPNNAVAWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLER 237

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++AL+  ++ L ++  + +A++ RG+ L  L ++++A++       ++P+N E    R 
Sbjct: 238 YQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRG 297

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
                +  Y+EA + YD A+ L L+  +       A+Y +   L    +    F  FD  
Sbjct: 298 VALEKLERYQEAFQSYDQAIQLNLNDAQ-------AWYNRGFPLGKLERYEEAFQSFDQA 350

Query: 687 GDIDPLFKEYWCKR 700
             ++P + E W  R
Sbjct: 351 IKLNPNYAEAWNYR 364



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 137/266 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A     +Y  A   +DQ +K +P + +A   RG A       E A   F +AI+ N
Sbjct: 397 NQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLN 456

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EAW  +G A   L    EA+Q   +A++  PN A+  + +G+   K + +  A++ 
Sbjct: 457 PNHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQS 516

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +KL+     A+   G AL ++  Y++A ++  KAIQL+ N  EAW +     ++L 
Sbjct: 517 YDQAIKLNPNYAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLE 576

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++AL+   + + ++  +++A   RG+ L  L ++++A +     + ++P+N E  Y R
Sbjct: 577 RYQEALQSYDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKAIQLNPNNTEAWYNR 636

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
                 +  ++EAI  YD AL ++ D
Sbjct: 637 GVVLGKLERHQEAIASYDQALVIKRD 662



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 159/348 (45%), Gaps = 41/348 (11%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A     +Y  A+  FD+ L+ +P   E    RG A       + A+  + +A++ NP
Sbjct: 194 RGVALGKLERYQEALPTFDKALELNPNNAEVWFNRGVALVNLERYQEALQSYEKALKLNP 253

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI--------------- 491
           + GEAW  RG A  +L    EA++   KA E  PN+A+  + RG+               
Sbjct: 254 NYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEKLERYQEAFQSY 313

Query: 492 -----VNF--------------KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
                +N               K + +  A +     +KL+     A+ Y GLAL ++  
Sbjct: 314 DQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYRGLALGNLER 373

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           Y++A +++ +AI+L+ N+ EAW +       L   E+A +   Q + ++   ++A++ RG
Sbjct: 374 YEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRG 433

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           + L  L ++++A +     + ++P++ E  Y +      +  Y+EA++ YD A+ L  + 
Sbjct: 434 VALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNY 493

Query: 653 MEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            E       A+Y + +AL    +       +D    ++P + E W  R
Sbjct: 494 AE-------AWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNR 534



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 158/350 (45%), Gaps = 41/350 (11%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+A VN  +Y  A+  +++ LK +P Y EA   RG A       + A+  F +A + 
Sbjct: 226 FNRGVALVNLERYQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKAREL 285

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+  E+W  RG A   L    EA Q   +A++   N A   + RG    K + +  A +
Sbjct: 286 NPNNAESWNNRGVALEKLERYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQ 345

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
                +KL+     A+ Y GLAL ++  Y++A +++ +AI+L+ N+ EAW       G L
Sbjct: 346 SFDQAIKLNPNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGML 405

Query: 558 T------QFYQ---------------------DLANSEKALECLQQVLYIDKRFSKAYHL 590
                  QFY                      +L   E+A +   + + ++   ++A++ 
Sbjct: 406 ERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYN 465

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           +G+ L  L ++++A++     + ++P+  E  Y +      +  Y+EA++ YD A+ L  
Sbjct: 466 QGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNP 525

Query: 651 DSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           +  E       A+Y +  AL         F  FD    ++P   E W  R
Sbjct: 526 NYAE-------AWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNR 568



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 147/302 (48%), Gaps = 6/302 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A     +Y  A   +DQ ++ +    +A   RG         E A   F +AI+ N
Sbjct: 295 NRGVALEKLERYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLN 354

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EAW  RG A   L    EA Q   +A++  PN A+  + +G+     + +  A + 
Sbjct: 355 PNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQF 414

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +KL+  +  A+   G+AL ++  Y++A ++  KAI+L+ N  EAW +       L 
Sbjct: 415 YDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLE 474

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++AL+   Q + ++  +++A++ +G+ L  L ++++A++     + ++P+  E  Y R
Sbjct: 475 RYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNR 534

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEK-----FVLQCLAFYQKEIALY-TASKINSE 679
                 +  Y+EA + +D A+ L  +  E      F L+ L  YQ+ +  Y  A ++N  
Sbjct: 535 GFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQSYDKAIQLNPN 594

Query: 680 FC 681
           + 
Sbjct: 595 YA 596



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 109/226 (48%), Gaps = 2/226 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A     +Y  A+  +DQ +K +P Y EA   +G A       + A+  + +AI+ N
Sbjct: 465 NQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLN 524

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EAW  RG A   L    EA Q   KA++  PN A+  + RG      + +  A++ 
Sbjct: 525 PNYAEAWYNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQS 584

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L+     A    G+AL  +  Y++A ++  KAIQL+ N  EAW +       L 
Sbjct: 585 YDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKAIQLNPNNTEAWYNRGVVLGKLE 644

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL--GQHKKAIKDLS 609
             ++A+    Q L I + F  A+  RG L++ L  G   K I  L+
Sbjct: 645 RHQEAIASYDQALVIKRDFYLAWINRGNLIYSLSSGNFLKIISPLA 690



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 110/224 (49%), Gaps = 9/224 (4%)

Query: 479 EPNSADI--LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           EP + +I  L  +G  +F  +++ AA++ L   + L+     A+   G+ L ++G++++A
Sbjct: 12  EPVNEEIEALLNQGRDHFNAQNYQAALDALEQVLTLEPNKVEAWNGQGVVLFNLGKHQEA 71

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
            ++  KA++L+ N   AW +       L   E+AL    + L ++  +++A   RG +L 
Sbjct: 72  LQSFNKALELNSNEANAWNYRGVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFVLG 131

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            L ++++A+      L ++P+  E L+ R      +  Y+EA + YD AL+L  ++    
Sbjct: 132 KLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELNPNN---- 187

Query: 657 VLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
               +A+  + +AL    +       FD   +++P   E W  R
Sbjct: 188 ---AVAWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNR 228



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 11  YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQ 70
           + L K  + +   ++ + ++S  A+A   R     L  L  + +A+   D  L  +    
Sbjct: 63  FNLGKHQEALQSFNKALELNSNEANAWNYRG--VALLHLGKYEEALSTFDKALELNPNYA 120

Query: 71  D-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           + + NR F   +LE ++  +   DKAL+L+P   +A   +G A   L R +EA   ++K 
Sbjct: 121 EALSNRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKA 180

Query: 130 YE 131
            E
Sbjct: 181 LE 182



 Score = 43.9 bits (102), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD- 71
           L K  + +   D+ + ++   A A++ R  +  L  L  + +A+   D  L  +    + 
Sbjct: 99  LGKYEEALSTFDKALELNPNYAEALSNRGFV--LGKLERYQEALPTFDKALELNPNYAEA 156

Query: 72  ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           + NR     +LE ++   +  DKAL+L+P    A+  +G A   L R +EAL  ++K  E
Sbjct: 157 LFNRGVALERLERYQEAFQSYDKALELNPNNAVAWNYRGVALGKLERYQEALPTFDKALE 216



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 30/56 (53%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           NR F    LE ++  ++  DKA+QL+P   +A   +G A   L R EEA   ++K 
Sbjct: 567 NRGFSLRNLERYQEALQSYDKAIQLNPNYAEALFNRGVALERLERYEEAFQSFDKA 622



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 11/123 (8%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASA-ITARIELAKLC----SLRNWSKAIRILDSLLAQS 66
           +L +  + +   D+ ++++   A A     + L KL     +L+++ +AI+ L+   A++
Sbjct: 472 KLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQSYDQAIK-LNPNYAEA 530

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
           +      NR F    LE ++   +  DKA+QL+P   +A+  +G +   L R +EAL  +
Sbjct: 531 W-----YNRGFALGNLECYQEAFQSFDKAIQLNPNDAEAWNNRGFSLRNLERYQEALQSY 585

Query: 127 EKG 129
           +K 
Sbjct: 586 DKA 588


>gi|220927089|ref|YP_002502391.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219951696|gb|ACL62088.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 988

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 155/335 (46%), Gaps = 15/335 (4%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    ++G+Y  AI+ +DQ L+ +P Y  A   RG A   + E + AI+D+ + ++ N
Sbjct: 31  TRGYKFQSKGEYDRAIADYDQALRLNPKYVTAYSNRGFAYQSKGEYDRAIADYDQVLRLN 90

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A  + GE   AI D  +AL+  P  A     RG V     + + A+ D
Sbjct: 91  PKNVIAYNNRGFAYQSKGEYDRAIADYDQALQLNPKYAIAYRNRGDVFRSKGEHDRAIAD 150

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  ++ + +   AY   GL   S GEY +A     +A++LD  ++ A+ +    +Q   
Sbjct: 151 YSQALRFNPKYIFAYNNRGLVFQSKGEYDRAIADFDQALRLDPKYVVAYNNRGLAFQSKR 210

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    Q L +D ++  AY+ RGL     G+H +AI D    L +DP        R
Sbjct: 211 EYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLDPKYTFAYRNR 270

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY--------- 671
              + + GEY  AI DYD AL L+      +  +  AF     Y + +A Y         
Sbjct: 271 GDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLDPK 330

Query: 672 TASKINSEFCWFDIDGDIDPLFKEY-WCKRLHPKN 705
           + +   +   +F   GD D    +Y    RL PKN
Sbjct: 331 SVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKN 365



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 154/322 (47%), Gaps = 10/322 (3%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           V R++    I+ +   +RG A  ++G+Y  AI+ +DQ L+ +P Y  A   RG     + 
Sbjct: 86  VLRLNPKNVIAYN---NRGFAYQSKGEYDRAIADYDQALQLNPKYAIAYRNRGDVFRSKG 142

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E + AI+D+++A++ NP    A+  RG    + GE   AI D  +AL  +P      + R
Sbjct: 143 EHDRAIADYSQALRFNPKYIFAYNNRGLVFQSKGEYDRAIADFDQALRLDPKYVVAYNNR 202

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+     ++++ A+ D    ++LD + K AY   GL   S GE+ +A     +A++LD  
Sbjct: 203 GLAFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLDPK 262

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           +  A+ +    ++     ++A+    Q L +D +++ AY  R         + +A+ D  
Sbjct: 263 YTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYD 322

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
             L +DP ++     R   + + G+Y  AI DYD A  L LD   K     LA+  + + 
Sbjct: 323 QALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEA--LRLDPKNK-----LAYNNRGLV 375

Query: 670 LYTASKINSEFCWFDIDGDIDP 691
             + ++ N     FD    IDP
Sbjct: 376 FQSKNEYNLAIADFDQALLIDP 397



 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 137/281 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   ++G+Y  AI+ FDQ L+ DP Y  A   RG A   +RE + AI+DF +A++ +
Sbjct: 167 NRGLVFQSKGEYDRAIADFDQALRLDPKYVVAYNNRGLAFQSKREYDRAIADFDQALRLD 226

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                A+  RG    + GE   AI D  +AL  +P        RG       +++ A+ D
Sbjct: 227 SKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLDPKYTFAYRNRGDAFRSKGEYDRAIAD 286

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + LD +   AYT    A  S  +Y +A   + +A++LD   + A+ +   F++   
Sbjct: 287 YDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLDPKSVAAYRNRGDFFRSKG 346

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + ++A+    + L +D +   AY+ RGL+     ++  AI D    L IDP +      R
Sbjct: 347 DYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIADFDQALLIDPKDAVIYRNR 406

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
              + + GEY  AI +YD AL L+         + LAFY+K
Sbjct: 407 GDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRK 447



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 128/264 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  ++G+Y  AI+ +DQ L  DP Y  A   R  A   +R+ + A++D+ +A++ +
Sbjct: 269 NRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALADYDQALRLD 328

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +  A++ RG    + G+   AI D  +AL  +P +    + RG+V     ++N A+ D
Sbjct: 329 PKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIAD 388

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + +D ++   Y   G    S GEY +A   + +A+QLD  +     +    +    
Sbjct: 389 FDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKG 448

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++AL    Q L +D + +  Y  RG +    G+H +AI D    L +DP  I     R
Sbjct: 449 EYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNR 508

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
              +   GEY  AI DYD  L L+
Sbjct: 509 GLVFQNKGEYNRAILDYDQTLRLD 532



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 6/284 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
           +RG+   ++ +Y  AI+ FDQ L  DP   +A+I R     F+   E + AI+++ +A+Q
Sbjct: 371 NRGLVFQSKNEYNLAIADFDQALLIDPK--DAVIYRNRGDVFRSKGEYDRAIANYDQALQ 428

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAA 502
            +P        RG A    GE   A+ D  ++L+ +P  A +   RG V F+ K + + A
Sbjct: 429 LDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLDPKQAVVYTNRGDV-FRIKGEHDRA 487

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D    ++LD +   AY   GL   + GEY +A   + + ++LD  +  A+ +    +Q
Sbjct: 488 IADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANRGDTFQ 547

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                ++A+    Q L  + ++  AY+ RGL  +  G+H +AI D    L +DP +    
Sbjct: 548 SKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAF 607

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
             R +  +  GEY  AI D D AL L+         + +AF  K
Sbjct: 608 NNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHYHRGMAFRHK 651



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 132/271 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    ++G Y  AI+ +D+ L+ DP    A   RG     + E   AI+DF +A+  +
Sbjct: 337 NRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIADFDQALLID 396

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     ++ RG    + GE   AI +  +AL+ +P  A + + RG+  ++  +++ A+ D
Sbjct: 397 PKDAVIYRNRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYDRALAD 456

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD +    YT  G      GE+ +A   + +A++LD  ++ A+ +    +Q+  
Sbjct: 457 YDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKG 516

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +A+    Q L +D +++ AY  RG      G++ +AI D    L  +P  +     R
Sbjct: 517 EYNRAILDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGR 576

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
              ++  GE+  AI DY+ AL L+  S   F
Sbjct: 577 GLAFYRKGEHDRAIADYEEALRLDPKSAAAF 607



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 143/315 (45%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   ++G++  AI+ FDQ L+ DP Y  A   RG A   + E + AI+D+ +A+  +
Sbjct: 235 NRGLTFQSKGEHDRAIADFDQALRLDPKYTFAYRNRGDAFRSKGEYDRAIADYDQALLLD 294

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  R  A  +  +   A+ D  +AL  +P S      RG       D++ A+ D
Sbjct: 295 PKYTFAYTARAFAFQSKRDYDRALADYDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIAD 354

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD +NK AY   GL   S  EY  A     +A+ +D      + +    ++   
Sbjct: 355 YDEALRLDPKNKLAYNNRGLVFQSKNEYNLAIADFDQALLIDPKDAVIYRNRGDVFRSKG 414

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    Q L +D +++  ++ RGL  +  G++ +A+ D    L +DP        R
Sbjct: 415 EYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLDPKQAVVYTNR 474

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
              +   GE+  AI DYD AL L+     K++    A+  + +      + N     +D 
Sbjct: 475 GDVFRIKGEHDRAIADYDQALRLD----PKYI---FAYNNRGLVFQNKGEYNRAILDYDQ 527

Query: 686 DGDIDPLFKEYWCKR 700
              +DP +   +  R
Sbjct: 528 TLRLDPKYAIAYANR 542



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 127/264 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  ++ +Y  AI+ FDQ L+ D  Y  A   RG     + E + AI+DF +A++ +
Sbjct: 201 NRGLAFQSKREYDRAIADFDQALRLDSKYKFAYNNRGLTFQSKGEHDRAIADFDQALRLD 260

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A++ RG A  + GE   AI D  +AL  +P        R       +D++ A+ D
Sbjct: 261 PKYTFAYRNRGDAFRSKGEYDRAIADYDQALLLDPKYTFAYTARAFAFQSKRDYDRALAD 320

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD ++ +AY   G    S G+Y +A   + +A++LD     A+ +    +Q   
Sbjct: 321 YDQALRLDPKSVAAYRNRGDFFRSKGDYDRAIADYDEALRLDPKNKLAYNNRGLVFQSKN 380

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
               A+    Q L ID + +  Y  RG +    G++ +AI +    L +DP        R
Sbjct: 381 EYNLAIADFDQALLIDPKDAVIYRNRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNR 440

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
              ++  GEY  A+ DYD +L L+
Sbjct: 441 GLAFYRKGEYDRALADYDQSLQLD 464



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 2/264 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    ++G+Y  AI+ +DQ L+ DP Y      RG A   + E + A++D+ +++Q +
Sbjct: 405 NRGDVFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYDRALADYDQSLQLD 464

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG      GE   AI D  +AL  +P      + RG+V     ++N A+ D
Sbjct: 465 PKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILD 524

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQDL 564
               ++LD +   AY   G    S GEY +A   + +A+Q +  ++ A+ G    FY+  
Sbjct: 525 YDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRK- 583

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+   ++ L +D + + A++ RG  L+  G++ +AI DL   L + P      Y 
Sbjct: 584 GEHDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHYH 643

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R   +   G+   A+ D + A+ L
Sbjct: 644 RGMAFRHKGDLDRALADLNEAVRL 667



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 111/223 (49%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G++  AI+ +DQ L+ DP Y  A   RG     + E   AI D+ + ++ +P    A+ 
Sbjct: 481 KGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYA 540

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG    + GE   AI D  +AL+  P      + RG+  ++  + + A+ D    ++LD
Sbjct: 541 NRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLD 600

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            ++ +A+   G AL+  GEY +A     +A++L   F     H    ++   + ++AL  
Sbjct: 601 PKSAAAFNNRGAALNKKGEYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALAD 660

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           L + + ++ +++ AY  RG+     G+  +A+ DL+  + + P
Sbjct: 661 LNEAVRLNPKYADAYQERGVTFQARGESDRALADLAEAVRLKP 703



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 2/274 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A   +G+Y  A++ +DQ L+ DP        RG     + E + AI+D+ +A++ +
Sbjct: 439 NRGLAFYRKGEYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLD 498

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG      GE   AI D  + L  +P  A     RG       +++ A+ D
Sbjct: 499 PKYIFAYNNRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIAD 558

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++ + +   AY   GLA    GE+ +A   + +A++LD     A+ +         
Sbjct: 559 YDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAFNNRGAALNKKG 618

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+  L Q L +   F+  ++ RG+     G   +A+ DL+  + ++P   +    R
Sbjct: 619 EYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVRLNPKYADAYQER 678

Query: 626 ASCYHAIGEYREAIKDYDAALDL--ELDSMEKFV 657
              + A GE   A+ D   A+ L  EL++   F+
Sbjct: 679 GVTFQARGESDRALADLAEAVRLKPELEADATFL 712



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 3/108 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A   +G+Y  AI+  DQ L+  P +      RG A   + +L+ A++D  EA++ N
Sbjct: 609 NRGAALNKKGEYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVRLN 668

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN---SADILHERG 490
           P   +A++ RG    A GES  A+ DL++A+  +P     A  L  RG
Sbjct: 669 PKYADAYQERGVTFQARGESDRALADLAEAVRLKPELEADATFLKVRG 716



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 6/101 (5%)

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            +  RG      G++ +AI D    L ++P  +     R   Y + GEY  AI DYD  L
Sbjct: 28  GFSTRGYKFQSKGEYDRAIADYDQALRLNPKYVTAYSNRGFAYQSKGEYDRAIADYDQVL 87

Query: 647 DLELDSM-----EKFVLQCLAFYQKEIALY-TASKINSEFC 681
            L   ++       F  Q    Y + IA Y  A ++N ++ 
Sbjct: 88  RLNPKNVIAYNNRGFAYQSKGEYDRAIADYDQALQLNPKYA 128



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 11/127 (8%)

Query: 11  YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQ 65
           YR  +  + + + D+ +++D   A   T R ++ ++      ++ ++ +A+R LD     
Sbjct: 445 YRKGEYDRALADYDQSLQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALR-LDPKYIF 503

Query: 66  SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
           +Y      NR   +     +   I D D+ L+LDP    AY  +G  F + G  + A++ 
Sbjct: 504 AYN-----NRGLVFQNKGEYNRAILDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIAD 558

Query: 126 WEKGYEH 132
           +++  +H
Sbjct: 559 YDQALQH 565


>gi|334120659|ref|ZP_08494738.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333456261|gb|EGK84896.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 346

 Score =  132 bits (333), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 83/279 (29%), Positives = 139/279 (49%), Gaps = 34/279 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+    +G Y +A+  FDQIL+ +P   +A   RG    + ++ + AI+D ++A+  NP
Sbjct: 9   RGLHSAKKGNYEAALEDFDQILQVNPADAKAYNNRGLVYYYMKDYQKAIADLSQALDINP 68

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA+  RG A   LGE  +AI+DL+ AL  +PNS  I + RG+V     ++  A+ED 
Sbjct: 69  NFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAIEDY 128

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + ++  N   Y   G A   +GE                                  
Sbjct: 129 NRALSINSHNYKTYYNRGRAYYLLGE---------------------------------- 154

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A E   + L ++ ++ KAY  RGL  H LG + +AI D ++ LGIDP N+   Y R 
Sbjct: 155 KEAATENFNETLRLNPKYIKAYINRGLCYHQLGDNTQAIADYNTALGIDPQNVYAYYNRG 214

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
              + + + + AI+D+D A+ L+ + ++ ++ + LA Y+
Sbjct: 215 CVRYKLKQMQLAIEDFDKAVKLDPNYVKAYLNRGLALYK 253



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/180 (27%), Positives = 95/180 (52%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            ++RG+ + K  ++ AA+ED    ++++  +  AY   GL    + +Y+KA     +A+ 
Sbjct: 6   FYKRGLHSAKKGNYEAALEDFDQILQVNPADAKAYNNRGLVYYYMKDYQKAIADLSQALD 65

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++ NF EA+ +    ++ L   EKA+E L   L         Y+ RGL+L  LG +++AI
Sbjct: 66  INPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAI 125

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           +D +  L I+  N +  Y R   Y+ +GE   A ++++  L L    ++ ++ + L ++Q
Sbjct: 126 EDYNRALSINSHNYKTYYNRGRAYYLLGEKEAATENFNETLRLNPKYIKAYINRGLCYHQ 185



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/151 (33%), Positives = 73/151 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   N G Y  AI  +++ L  +    +    RG A     E EAA  +F E ++ N
Sbjct: 110 NRGLVLANLGNYEEAIEDYNRALSINSHNYKTYYNRGRAYYLLGEKEAATENFNETLRLN 169

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG     LG++ +AI D + AL  +P +    + RG V +K K    A+ED
Sbjct: 170 PKYIKAYINRGLCYHQLGDNTQAIADYNTALGIDPQNVYAYYNRGCVRYKLKQMQLAIED 229

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
               VKLD     AY   GLAL  +G+   A
Sbjct: 230 FDKAVKLDPNYVKAYLNRGLALYKLGDVTAA 260



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 3/137 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G+  +A   F++ L+ +P Y +A I RG       +   AI+D+  A+  +
Sbjct: 144 NRGRAYYLLGEKEAATENFNETLRLNPKYIKAYINRGLCYHQLGDNTQAIADYNTALGID 203

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG  R  L +   AI+D  KA++ +PN       RG+  +K  D  AA  D
Sbjct: 204 PQNVYAYYNRGCVRYKLKQMQLAIEDFDKAVKLDPNYVKAYLNRGLALYKLGDVTAANRD 263

Query: 506 LSACVKLDKENKSAYTY 522
               + ++ E   AY Y
Sbjct: 264 FYHVMCINAE---AYLY 277



 Score = 43.5 bits (101), Expect = 0.66,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 45/88 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG+     G    AI+ ++  L  DP    A   RG  R   ++++ AI DF +A++ 
Sbjct: 177 INRGLCYHQLGDNTQAIADYNTALGIDPQNVYAYYNRGCVRYKLKQMQLAIEDFDKAVKL 236

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDL 472
           +P+  +A+  RG A   LG+   A +D 
Sbjct: 237 DPNYVKAYLNRGLALYKLGDVTAANRDF 264


>gi|384210167|ref|YP_005595887.1| hypothetical protein Bint_2713 [Brachyspira intermedia PWS/A]
 gi|343387817|gb|AEM23307.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 853

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 126/224 (56%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RGIA+     Y  AI  F++++K +P   +A + RG A+++  E E AI DF E I+ 
Sbjct: 195 FNRGIAKTKLEIYEEAIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDFNEVIKL 254

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+  +A+  RG A+   G+  E I+D +KA+E  PN+ +    RGI   K + +  AV 
Sbjct: 255 NPNNEKAYLARGIAKIESGKHEEVIEDFNKAIELNPNNENAYFNRGIAKAKLEKYEEAVV 314

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  +KL+K N+  Y   G+    + +Y++A E   KAI L++++ +A+ +      + 
Sbjct: 315 DFNKAIKLNKNNEKTYFSRGITKVKLEKYEEAIEDFNKAIGLNKSYNKAYFNRGILKINF 374

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              ++A+    + + ++K ++KAY  RG+L    G++K+AI D 
Sbjct: 375 GKYKEAINDFNKAIGLNKNYNKAYFNRGILKTNFGKYKEAINDF 418



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 143/298 (47%), Gaps = 34/298 (11%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RGI +V   KY  AI  F++I+K +P         G A+A   + E AI DF E I+ 
Sbjct: 93  FNRGITKVKLEKYEEAIEDFNKIIKLNPKNERGYFNIGFAKASLEKYEEAIKDFNEVIKL 152

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N    EA+  RG A+  L +  EAI+D +K+++    + +    RGI   K + +  A++
Sbjct: 153 NTKNEEAYFFRGLAKVKLEKDKEAIEDFNKSIKLNSKNEEAYFNRGIAKTKLEIYEEAIK 212

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA--------------EEAHL--------- 541
           D +  +KL+  N+ AY   G+A S + EY++A              E+A+L         
Sbjct: 213 DFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDFNEVIKLNPNNEKAYLARGIAKIES 272

Query: 542 -----------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
                      KAI+L+ N   A+ +       L   E+A+    + + ++K   K Y  
Sbjct: 273 GKHEEVIEDFNKAIELNPNNENAYFNRGIAKAKLEKYEEAVVDFNKAIKLNKNNEKTYFS 332

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           RG+    L ++++AI+D +  +G++ S  +  + R       G+Y+EAI D++ A+ L
Sbjct: 333 RGITKVKLEKYEEAIEDFNKAIGLNKSYNKAYFNRGILKINFGKYKEAINDFNKAIGL 390



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 133/267 (49%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG        Y  AI  F++ +K +P   +A   RG  +    + E AI DF + 
Sbjct: 56  DLYFNRGKLYSIINMYDEAIEDFNKAIKLNPNNEKAYFNRGITKVKLEKYEEAIEDFNKI 115

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP     +   G A+A+L +  EAI+D ++ ++    + +    RG+   K +    
Sbjct: 116 IKLNPKNERGYFNIGFAKASLEKYEEAIKDFNEVIKLNTKNEEAYFFRGLAKVKLEKDKE 175

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ED +  +KL+ +N+ AY   G+A + +  Y++A +   + I+L+ N  +A+       
Sbjct: 176 AIEDFNKSIKLNSKNEEAYFNRGIAKTKLEIYEEAIKDFNEVIKLNPNNEKAYLARGIAK 235

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             L   E+A++   +V+ ++    KAY  RG+     G+H++ I+D +  + ++P+N   
Sbjct: 236 SYLEEYEEAIKDFNEVIKLNPNNEKAYLARGIAKIESGKHEEVIEDFNKAIELNPNNENA 295

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
            + R      + +Y EA+ D++ A+ L
Sbjct: 296 YFNRGIAKAKLEKYEEAVVDFNKAIKL 322



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 127/239 (53%), Gaps = 10/239 (4%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +++E AI     AI+   +  + +  RG+  + +    EAI+D +KA++  PN+      
Sbjct: 35  KKIEDAIKLVNRAIEEYNNDEDLYFNRGKLYSIINMYDEAIEDFNKAIKLNPNNEKAYFN 94

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RGI   K + +  A+ED +  +KL+ +N+  Y  +G A +S+ +Y++A +   + I+L+ 
Sbjct: 95  RGITKVKLEKYEEAIEDFNKIIKLNPKNERGYFNIGFAKASLEKYEEAIKDFNEVIKLNT 154

Query: 549 NFLEAWGHLTQFYQDLAN-----SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
              EA+     F++ LA       ++A+E   + + ++ +  +AY  RG+    L  +++
Sbjct: 155 KNEEAY-----FFRGLAKVKLEKDKEAIEDFNKSIKLNSKNEEAYFNRGIAKTKLEIYEE 209

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           AIKD +  + ++P+N +    R      + EY EAIKD++  + L  ++ + ++ + +A
Sbjct: 210 AIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDFNEVIKLNPNNEKAYLARGIA 268



 Score = 47.4 bits (111), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 29  VDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKH 87
           +D  M  A+  +IE  KL S +    AI++++  + +    +D+  NR   YS + ++  
Sbjct: 16  LDYFMTDALKYKIE--KLISSKKIEDAIKLVNRAIEEYNNDEDLYFNRGKLYSIINMYDE 73

Query: 88  VIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
            I D +KA++L+P   +AY  +G     L + EEA+  + K
Sbjct: 74  AIEDFNKAIKLNPNNEKAYFNRGITKVKLEKYEEAIEDFNK 114



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 67/116 (57%), Gaps = 11/116 (9%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAI----TARIELAK-LCSLRNWSKAIRILDSLLAQSY 67
           L K  + I + +E++++++    A      A+++L K   ++ +++K+I+ L+S   ++Y
Sbjct: 136 LEKYEEAIKDFNEVIKLNTKNEEAYFFRGLAKVKLEKDKEAIEDFNKSIK-LNSKNEEAY 194

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
                 NR    ++LE+++  I+D ++ ++L+P   +AY+ +G A S L   EEA+
Sbjct: 195 -----FNRGIAKTKLEIYEEAIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAI 245


>gi|428320933|ref|YP_007118815.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244613|gb|AFZ10399.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 471

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 159/314 (50%), Gaps = 10/314 (3%)

Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDP 412
           K TS +   +KK  +   +++  +  D  L+   RG  + N G    AI+ F++ ++  P
Sbjct: 15  KPTSQDDLGDKKGAIADYNRAIELQPDDALAYYNRGNVRYNLGDKKGAIADFNKAIELQP 74

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
              EA   RG  R+   + + AI+D  +AI+  P    A+  RG  R+ LG+   AI D 
Sbjct: 75  DLAEAYGNRGLFRSELGDKKGAIADLNKAIELQPDLALAYVNRGAVRSKLGDKKGAIADY 134

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           +KA+E +P+ A   + RG+V  +  D   A+ D +  ++L  +   AY   GL  S +G+
Sbjct: 135 NKAIELQPDYAQAYYNRGLVRSELGDKKGAIADYNKAIELKPDLALAYYNRGLVRSELGD 194

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
            K A   + KAI+L  ++ +A+G+      +L + + A+  L +V+ +    ++AY+ RG
Sbjct: 195 KKGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRG 254

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           L    LG  K AI D +  + + P + +  Y R +  + +G+ + AI D++ A++L+ D 
Sbjct: 255 LFRSELGDKKGAIADFNKAIELQPDDAQAYYKRGNVRYILGDKKGAITDFNKAIELQPDD 314

Query: 653 MEKFVLQCLAFYQK 666
                    A+Y +
Sbjct: 315 -------AFAYYNR 321



 Score =  112 bits (281), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 148/303 (48%), Gaps = 3/303 (0%)

Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           +KK  +  ++K+  +  D  L+   RG  +   G    AI+ +++ ++  P Y +A   R
Sbjct: 92  DKKGAIADLNKAIELQPDLALAYVNRGAVRSKLGDKKGAIADYNKAIELQPDYAQAYYNR 151

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G  R+   + + AI+D+ +AI+  P    A+  RG  R+ LG+   AI D +KA+E +P+
Sbjct: 152 GLVRSELGDKKGAIADYNKAIELKPDLALAYYNRGLVRSELGDKKGAIADYNKAIELQPD 211

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A     RG V  +  D   A+ DL+  ++L  +   AY   GL  S +G+ K A     
Sbjct: 212 YAQAYGNRGTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRGLFRSELGDKKGAIADFN 271

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KAI+L  +  +A+         L + + A+    + + +    + AY+ RG + + LG  
Sbjct: 272 KAIELQPDDAQAYYKRGNVRYILGDKKGAITDFNKAIELQPDDAFAYYNRGNVRYILGDK 331

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           K AI D +  + + P + +  + R +    +G+ +  I DY+  ++L+ D  + ++ + L
Sbjct: 332 KGAIADYNKAIELKPDDAQAYFNRGNVRSELGDKKGEIADYNKVIELQPDYADAYINRGL 391

Query: 662 AFY 664
             Y
Sbjct: 392 VRY 394



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 142/287 (49%), Gaps = 3/287 (1%)

Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           +KK  +   +K+  +  D  L+   RG+ +   G    AI+ +++ ++  P Y +A   R
Sbjct: 160 DKKGAIADYNKAIELKPDLALAYYNRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNR 219

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           GT R+   + + AI+D  + I+  P   +A+  RG  R+ LG+   AI D +KA+E +P+
Sbjct: 220 GTVRSELGDKKGAIADLNKVIELKPDLAQAYYNRGLFRSELGDKKGAIADFNKAIELQPD 279

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A   ++RG V +   D   A+ D +  ++L  ++  AY   G     +G+ K A   + 
Sbjct: 280 DAQAYYKRGNVRYILGDKKGAITDFNKAIELQPDDAFAYYNRGNVRYILGDKKGAIADYN 339

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KAI+L  +  +A+ +      +L + +  +    +V+ +   ++ AY  RGL+ + LG  
Sbjct: 340 KAIELKPDDAQAYFNRGNVRSELGDKKGEIADYNKVIELQPDYADAYINRGLVRYDLGDK 399

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           K AI DL+  + + P        R +  + +G+ + AI+D   A  L
Sbjct: 400 KGAIADLNKAIELQPDYAFAYGNRGNVRYNLGDKKGAIEDLQKAAQL 446



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 11/127 (8%)

Query: 10  RYRLNKTHKTICEIDELVRVDSVMASAITAR----IELA-KLCSLRNWSKAIRILDSLLA 64
           RY L      I + ++ + +   +A A   R     EL  K  ++ + +KAI  L   LA
Sbjct: 53  RYNLGDKKGAIADFNKAIELQPDLAEAYGNRGLFRSELGDKKGAIADLNKAIE-LQPDLA 111

Query: 65  QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
            +Y      NR    S+L   K  I D +KA++L P   QAY  +G   S LG K+ A++
Sbjct: 112 LAY-----VNRGAVRSKLGDKKGAIADYNKAIELQPDYAQAYYNRGLVRSELGDKKGAIA 166

Query: 125 VWEKGYE 131
            + K  E
Sbjct: 167 DYNKAIE 173



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 25/155 (16%)

Query: 10  RYRLNKTHKTICEIDELVRVDSVMASAI----TARIELA-KLCSLRNWSKAIRILDSLLA 64
           R +L      I + ++ + +    A A       R EL  K  ++ +++KAI +   L  
Sbjct: 121 RSKLGDKKGAIADYNKAIELQPDYAQAYYNRGLVRSELGDKKGAIADYNKAIELKPDLAL 180

Query: 65  QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
             Y      NR    S+L   K  I D +KA++L P   QAY  +G   S LG K+ A+ 
Sbjct: 181 AYY------NRGLVRSELGDKKGAIADYNKAIELQPDYAQAYGNRGTVRSELGDKKGAI- 233

Query: 125 VWEKGYEHALHQSADLKQFLELEELLTAAKQDRSV 159
                        ADL + +EL+  L  A  +R +
Sbjct: 234 -------------ADLNKVIELKPDLAQAYYNRGL 255


>gi|405978666|gb|EKC43036.1| Tetratricopeptide repeat protein 13 [Crassostrea gigas]
          Length = 1032

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 178/355 (50%), Gaps = 13/355 (3%)

Query: 375  KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA--RAFQRELE 432
            ++K+  +D +L+ G   +N G    A+ IF+ IL   P    A  GRG    R   +E+ 
Sbjct: 682  QTKNNDIDSKLALGFVSINVGNLDDAMQIFNNILVYHPDSVGAYYGRGIVYQRMGIQEIA 741

Query: 433  AA---ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
             A   + +FTEAI  + +  E ++RR ++  AL    +A++DL+ A +   +S  +   R
Sbjct: 742  NAAKSVREFTEAIMKDENHHEIYERRAESYIALQHFNDALKDLNIAAK-SSSSKRLFFIR 800

Query: 490  GIVNFKFKDFNAAVEDLSACVKLDKENK---SAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            GIV+   ++F  A ED      LD +N     +Y +LGLAL   G+ + A E     ++L
Sbjct: 801  GIVHLLLENFVEAEEDFRR--NLDTDNSLYVGSYFHLGLALYYQGKVRNAIEVFKDVLKL 858

Query: 547  DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
              + +EA   L Q ++++ N + A +   Q ++++   ++ + L G +L+  G+H+ A  
Sbjct: 859  KPDHVEASTSLGQAFREIGNLKPAWKRFNQSVHMNPNHAQTWQLWGSMLYTQGEHRGARL 918

Query: 607  DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
                 L I+PSNI C Y+++  Y  +G+Y + +K     +     +++       A Y +
Sbjct: 919  HFDKCLDINPSNINCQYMKSLTYITMGKYYQGLKSSMKVMINNTPAIKASPEFIKAHYLR 978

Query: 667  EIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLK 721
            E A +  SK+++     DID    P FK+ W K+L P +  +    QP L+  +K
Sbjct: 979  EYARFLHSKLDTPLVDLDID-SFHPEFKDRWTKQL-PFHFKKTYKEQPGLQPEIK 1031


>gi|282896150|ref|ZP_06304175.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9]
 gi|281198950|gb|EFA73826.1| hypothetical protein CRD_01036 [Raphidiopsis brookii D9]
          Length = 706

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 140/264 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI     G    AI+ ++Q +K D  Y +A   RG  R+   + + AI D+ +AI+ N
Sbjct: 387 NRGIVHSELGDRQGAIADYNQAIKLDSNYTDAYYNRGIVRSELGDKQGAIVDYNQAIKLN 446

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG  R+ LG++  AI D ++A++  PN A   + RGIV+ +  D   A+ D
Sbjct: 447 PNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGIVHSELGDKRGAIAD 506

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD     AY   G+  S +G+ + A   + +AI+L+ N+  A+ +      +L 
Sbjct: 507 YNQAIRLDHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELG 566

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +++ A+    Q + ++  ++ AY+ RG +   LG  + AI D +  + +DP+  +  Y R
Sbjct: 567 DNQVAIADYNQAIKLNPNYALAYYNRGTVHSELGDKRGAIADYNQAIRLDPNYTDAYYNR 626

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
                 +G+ + AI DY+ A+ L+
Sbjct: 627 GILRSELGDKQGAIDDYNQAIKLD 650



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 173/339 (51%), Gaps = 7/339 (2%)

Query: 321 SNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSIS 380
           S ++S +  +S  S+    DS +S+S   F  D   E  N    +K+  +   +++  + 
Sbjct: 289 SPSDSMNSGESGTSNENIDDSIKSQSIAYF--DKAAEQYNGG--DKQGAIANYNQAIKLD 344

Query: 381 VDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
            D+    ++RG+ +   G    AI+ ++Q +K DP Y  A   RG   +   + + AI+D
Sbjct: 345 PDYTDAYINRGLVRSELGDRQGAIADYNQAIKLDPNYALAYYNRGIVHSELGDRQGAIAD 404

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +AI+ + +  +A+  RG  R+ LG+   AI D ++A++  PN  +    RG+V  +  
Sbjct: 405 YNQAIKLDSNYTDAYYNRGIVRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELG 464

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           D   A+ D +  +KL+     AY   G+  S +G+ + A   + +AI+LD N+ +A+ + 
Sbjct: 465 DNQVAIADYNQAIKLNPNYALAYYNRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNR 524

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                +L + + A+    Q + ++  ++ AY  RGL+   LG ++ AI D +  + ++P+
Sbjct: 525 GILRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPN 584

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
                Y R + +  +G+ R AI DY+ A+ L+ +  + +
Sbjct: 585 YALAYYNRGTVHSELGDKRGAIADYNQAIRLDPNYTDAY 623



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 137/267 (51%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RGI +   G    AI  ++Q +K +P Y  A I RG  R+   + + AI+D+ +A
Sbjct: 417 DAYYNRGIVRSELGDKQGAIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQA 476

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP+   A+  RG   + LG+   AI D ++A+  + N  D  + RGI+  +  D   
Sbjct: 477 IKLNPNYALAYYNRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNRGILRSELGDKQG 536

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  +KL+    +AY   GL  S +G+ + A   + +AI+L+ N+  A+ +    +
Sbjct: 537 AIVDYNQAIKLNPNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGTVH 596

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L +   A+    Q + +D  ++ AY+ RG+L   LG  + AI D +  + +DP+    
Sbjct: 597 SELGDKRGAIADYNQAIRLDPNYTDAYYNRGILRSELGDKQGAIDDYNQAIKLDPNYANA 656

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
            Y R      +G  + AI D+  A+++
Sbjct: 657 YYNRGIIRSELGYNQGAIADFQKAVNI 683



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 109/209 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI     G    AI+ ++Q ++ D  Y +A   RG  R+   + + AI D+ +AI+ N
Sbjct: 489 NRGIVHSELGDKRGAIADYNQAIRLDHNYTDAYYNRGILRSELGDKQGAIVDYNQAIKLN 548

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG  R+ LG++  AI D ++A++  PN A   + RG V+ +  D   A+ D
Sbjct: 549 PNYTNAYINRGLVRSELGDNQVAIADYNQAIKLNPNYALAYYNRGTVHSELGDKRGAIAD 608

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD     AY   G+  S +G+ + A + + +AI+LD N+  A+ +      +L 
Sbjct: 609 YNQAIRLDPNYTDAYYNRGILRSELGDKQGAIDDYNQAIKLDPNYANAYYNRGIIRSELG 668

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLL 594
            ++ A+   Q+ + I ++  K  + R  L
Sbjct: 669 YNQGAIADFQKAVNIYQQQGKENNYRDAL 697


>gi|296126379|ref|YP_003633631.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296018195|gb|ADG71432.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 391

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 163/327 (49%), Gaps = 12/327 (3%)

Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF---QRELEA 433
           K +SV   L       N+  Y +AI  F + +K DP   E    RG A+A    ++  ++
Sbjct: 4   KDVSV--FLKNAYNAFNDKDYKTAIDYFSEAIKLDPNSAETYYNRGNAKANLDDKKLYKS 61

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI D++ AI  N     A+  RG    + G + EAI+D  KA+E   N  +  + RG   
Sbjct: 62  AIEDYSWAINLNDKFAAAYYNRGILNRSFGNNKEAIEDFDKAIELNYNLEEAYYVRGNTK 121

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
              KD+  ++ED +  V++      AY  + L+ ++IG YK+A +A+ KAI+ + +F +A
Sbjct: 122 ASLKDYKGSIEDYNKAVEVYPHFSDAYYNMALSHNAIGNYKEAIKAYDKAIEYNSHFADA 181

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           + +     + L    +A++     L++++ F +AY  R      +  +K +I+D    + 
Sbjct: 182 YNNRGNVKEKLGYYNEAIDDYTNALHLNRNFIEAYFNRANAKFNIKNYKGSIEDFDEIIK 241

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTA 673
           IDP+  +  Y R     ++ EY++AI+D+D  ++LE     KF     A+Y K +A+   
Sbjct: 242 IDPTYSKAYYNRGIVKTSMEEYKDAIEDFDKVIELE----PKF---PDAYYNKAVAINHL 294

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKR 700
              +    ++D   +++P + E +C R
Sbjct: 295 GIYDEAVEFYDKAIELNPNYAESYCNR 321



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           S+ ++ + I+I D   +++Y      NR    + +E +K  I D DK ++L+P    AY 
Sbjct: 232 SIEDFDEIIKI-DPTYSKAY-----YNRGIVKTSMEEYKDAIEDFDKVIELEPKFPDAYY 285

Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
            K  A + LG  +EA+  ++K  E
Sbjct: 286 NKAVAINHLGIYDEAVEFYDKAIE 309


>gi|376003786|ref|ZP_09781589.1| hypothetical protein ARTHRO_160012 [Arthrospira sp. PCC 8005]
 gi|375327817|emb|CCE17342.1| hypothetical protein ARTHRO_160012 [Arthrospira sp. PCC 8005]
          Length = 1104

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 150/329 (45%), Gaps = 10/329 (3%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ + N G +  AIS +++ ++  P Y EA   RG A +   E E AIS F +A++  P 
Sbjct: 156 GLQRANNGDFRGAISSWEKAIELKPDYHEAWYNRGLALSLLGEYEQAISSFDQALKYKPD 215

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EAW  RG A + LGE  +AI    +AL+++ +     + RG       ++  A+    
Sbjct: 216 DHEAWYNRGVALSLLGELEQAISSFDQALKYKLDFHAAWNNRGNALKDLGEYEQAISSYD 275

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +K   +   A+   GLALS +GE +KA  ++ +A+   ++  EAW        DL   
Sbjct: 276 QALKYKPDYHVAWNNRGLALSDLGELEKAISSYDQALTYKQDKHEAWYSRGNALSDLGEY 335

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+A+    Q L     +  A++ RGL L  LG+ +KAI      L   P   E  Y R +
Sbjct: 336 EQAISSYDQALKYKPDYHVAWNNRGLALSDLGELEKAISSYDQALTYKPDFHEAWYSRGN 395

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG 687
               +GEY +AI  YD AL  + D  E       A++ + +ALY   ++      +D   
Sbjct: 396 ALSDLGEYEQAISSYDQALKYKPDFHE-------AWFNRGLALYFLGELEQAISSYDQAL 448

Query: 688 DIDPLFKEYWCKRLHPKNVCEKVYRQPPL 716
              P   E W  R    NV  +  R  P 
Sbjct: 449 KYKPDKHEAWANR---GNVAGQSLRTTPF 474



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 131/271 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A    G+Y  AIS FDQ LK  P   EA   RG A +   ELE AIS F +A++  
Sbjct: 188 NRGLALSLLGEYEQAISSFDQALKYKPDDHEAWYNRGVALSLLGELEQAISSFDQALKYK 247

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                AW  RG A   LGE  +AI    +AL+++P+     + RG+      +   A+  
Sbjct: 248 LDFHAAWNNRGNALKDLGEYEQAISSYDQALKYKPDYHVAWNNRGLALSDLGELEKAISS 307

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +   ++   A+   G ALS +GEY++A  ++ +A++   ++  AW +      DL 
Sbjct: 308 YDQALTYKQDKHEAWYSRGNALSDLGEYEQAISSYDQALKYKPDYHVAWNNRGLALSDLG 367

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             EKA+    Q L     F +A++ RG  L  LG++++AI      L   P   E  + R
Sbjct: 368 ELEKAISSYDQALTYKPDFHEAWYSRGNALSDLGEYEQAISSYDQALKYKPDFHEAWFNR 427

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
               + +GE  +AI  YD AL  + D  E +
Sbjct: 428 GLALYFLGELEQAISSYDQALKYKPDKHEAW 458



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 3/227 (1%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            ++   ++    +DF  +   RG A  + G+Y  AIS +DQ LK  P Y  A   RG A 
Sbjct: 236 AISSFDQALKYKLDFHAAWNNRGNALKDLGEYEQAISSYDQALKYKPDYHVAWNNRGLAL 295

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           +   ELE AIS + +A+       EAW  RG A + LGE  +AI    +AL+++P+    
Sbjct: 296 SDLGELEKAISSYDQALTYKQDKHEAWYSRGNALSDLGEYEQAISSYDQALKYKPDYHVA 355

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG+      +   A+      +    +   A+   G ALS +GEY++A  ++ +A++
Sbjct: 356 WNNRGLALSDLGELEKAISSYDQALTYKPDFHEAWYSRGNALSDLGEYEQAISSYDQALK 415

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
              +F EAW +       L   E+A+    Q L       +A+  RG
Sbjct: 416 YKPDFHEAWFNRGLALYFLGELEQAISSYDQALKYKPDKHEAWANRG 462



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 58/107 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  + G+   AIS +DQ L   P + EA   RG A +   E E AIS + +A++  
Sbjct: 358 NRGLALSDLGELEKAISSYDQALTYKPDFHEAWYSRGNALSDLGEYEQAISSYDQALKYK 417

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           P   EAW  RG A   LGE  +AI    +AL+++P+  +    RG V
Sbjct: 418 PDFHEAWFNRGLALYFLGELEQAISSYDQALKYKPDKHEAWANRGNV 464



 Score = 39.7 bits (91), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 13/138 (9%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++ +W KAI +        Y      NR    S L  ++  I   D+AL+  P   +A+ 
Sbjct: 168 AISSWEKAIELKPDYHEAWY------NRGLALSLLGEYEQAISSFDQALKYKPDDHEAWY 221

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHAL-------HQSADLKQFLELEELLTAAKQDRSVT 160
            +G A S LG  E+A+S +++  ++ L       ++   LK   E E+ +++  Q     
Sbjct: 222 NRGVALSLLGELEQAISSFDQALKYKLDFHAAWNNRGNALKDLGEYEQAISSYDQALKYK 281

Query: 161 CEYDVSNSMSSLTVSESG 178
            +Y V+ +   L +S+ G
Sbjct: 282 PDYHVAWNNRGLALSDLG 299


>gi|119590335|gb|EAW69929.1| tetratricopeptide repeat domain 13, isoform CRA_a [Homo sapiens]
          Length = 501

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 189/420 (45%), Gaps = 81/420 (19%)

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           ++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ E IK     +  +   
Sbjct: 1   MMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLP 60

Query: 653 MEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVY 711
            +K   + L   Y +E + Y  + +++    ++ID D+   FK++W K L    + E   
Sbjct: 61  GQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYE 118

Query: 712 RQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLA 770
            QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ PGFL N+R HR  GLA
Sbjct: 119 EQPGLQPHIKD--VLHQNFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLA 176

Query: 771 AIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTS 830
           A+E+ Q V + W         +N     NG     K R+                     
Sbjct: 177 ALEVMQAVQRTW---------TNSKVRMNG-----KTRL--------------------- 201

Query: 831 SYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMIL 889
                         M W+D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I 
Sbjct: 202 --------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIR 247

Query: 890 GQAKVVRYFPNYARTLDVAKTVMKDKKYVHNKADDIIDL------------SEDVVG--- 934
           GQ   +RY   + + L      +KD+  V++ A++   L             ED++    
Sbjct: 248 GQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMK 303

Query: 935 ------EDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAEM 988
                 + F + T   S   +GK+ +G  IT+         F++ T  T  R   + AE+
Sbjct: 304 FNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEI 363


>gi|402858688|ref|XP_003893824.1| PREDICTED: tetratricopeptide repeat protein 13-like [Papio anubis]
          Length = 487

 Score =  131 bits (329), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 188/421 (44%), Gaps = 82/421 (19%)

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           ++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ E IK     +  +   
Sbjct: 1   MMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLP 60

Query: 653 MEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVY 711
            +K   + L   Y +E + Y  + +++    ++ID D+   FK++W K L    + E   
Sbjct: 61  GQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYE 118

Query: 712 RQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLA 770
            QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ PGFL N+R HR  GLA
Sbjct: 119 EQPGLQPHIKD--VLHQNFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLA 176

Query: 771 AIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTS 830
           A+E+ Q V + W         +N     NG     K R+                     
Sbjct: 177 ALEVMQAVQRTW---------TNSKVRMNG-----KTRL--------------------- 201

Query: 831 SYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMIL 889
                         M W+D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I 
Sbjct: 202 --------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIR 247

Query: 890 GQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------------------NKADDIIDLSE 930
           GQ   +RY   + + L      +KD+  V+                   +K +D++ + +
Sbjct: 248 GQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMK 303

Query: 931 DV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAE 987
                  + F + T   S   +GK+ +G  IT+         F++ T  T  R   + AE
Sbjct: 304 QFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAE 363

Query: 988 M 988
           +
Sbjct: 364 I 364


>gi|9967204|dbj|BAB12304.1| hypothetical protein [Macaca fascicularis]
          Length = 502

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 188/421 (44%), Gaps = 82/421 (19%)

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           ++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ E IK     +  +   
Sbjct: 1   MMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLP 60

Query: 653 MEKFVLQCLAF-YQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVY 711
            +K   + L   Y +E + Y  + +++    ++ID D+   FK++W K L    + E   
Sbjct: 61  GQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKDHWAKNL--PFLIEDYE 118

Query: 712 RQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLA 770
            QP L+  +K   +  Q+F   K +   L+ VAD +G  +QY+ PGFL N+R HR  GLA
Sbjct: 119 EQPGLQPHIKD--VLHQNFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLA 176

Query: 771 AIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTS 830
           A+E+ Q V + W         +N     NG     K R+                     
Sbjct: 177 ALEVMQAVQRTW---------TNSKVRMNG-----KTRL--------------------- 201

Query: 831 SYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMIL 889
                         M W+D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I 
Sbjct: 202 --------------MQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIR 247

Query: 890 GQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------------------NKADDIIDLSE 930
           GQ   +RY   + + L      +KD+  V+                   +K +D++ + +
Sbjct: 248 GQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMK 303

Query: 931 DV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAE 987
                  + F + T   S   +GK+ +G  IT+         F++ T  T  R   + AE
Sbjct: 304 QFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAE 363

Query: 988 M 988
           +
Sbjct: 364 I 364


>gi|427707826|ref|YP_007050203.1| hypothetical protein Nos7107_2446 [Nostoc sp. PCC 7107]
 gi|427360331|gb|AFY43053.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 708

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 143/279 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  +   G    AI+ ++Q +K +P Y  A   RG  R    + + AI+D+T+A++ N
Sbjct: 390 NRGNTRAILGDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYTQAVKIN 449

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG +R  LG+   A+ D + AL+  PN+A+  + RG      KD  AA+ D
Sbjct: 450 PNHSSAYNGRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIAD 509

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +KL+    +AY   G A   +GE +KA   + +AI+ D N  EA+ +    Y DL 
Sbjct: 510 YNEAIKLNPNYSAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNVYFDLG 569

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N + A+    Q + I+  ++ AY+ RG   + L   + A+ D +  L + P+     Y R
Sbjct: 570 NKKGAISDYTQAIKINPNYAYAYNNRGNTKYDLNDLQGALADYNQALKLLPNYAFAYYNR 629

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
           A+ Y  +G+   AI DY+ A+    +  + +  + LA Y
Sbjct: 630 ANVYKNLGDLEGAIADYNRAIINNSNYAQAYQNRGLARY 668



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 150/311 (48%), Gaps = 12/311 (3%)

Query: 339 SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYA 398
           +D   +R  L  K   LK+ +   K N ++     ++  +I  DF   RG          
Sbjct: 287 NDRGNARYYLGDKQGALKDYNQAIKINPEYAFAYYNRG-NILYDFDDKRG---------- 335

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
            A++ ++Q LK +P Y  A   RG +     + + A++D+  AI+ +P   EA+  RG  
Sbjct: 336 -ALADYNQALKLNPNYSSAYNNRGNSHYALGDKQRALADYNLAIKVDPGNSEAYYNRGNT 394

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
           RA LG+   AI D ++A++  PN     + RG   +   D+  A+ D +  VK++  + S
Sbjct: 395 RAILGDKQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSS 454

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
           AY   G +   +G+ + A   +  A++ + N  EA+ +      DL +S  A+    + +
Sbjct: 455 AYNGRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIADYNEAI 514

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            ++  +S AY+ RG   + LG+ +KA+ D S  +  D +N E  Y R + Y  +G  + A
Sbjct: 515 KLNPNYSAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNVYFDLGNKKGA 574

Query: 639 IKDYDAALDLE 649
           I DY  A+ + 
Sbjct: 575 ISDYTQAIKIN 585



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 150/309 (48%), Gaps = 6/309 (1%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            V++ + +   + DF + +G  +  +G Y  AI  ++Q +  +P Y  A   RG AR + 
Sbjct: 238 AVSQPTPTAPKADDFYI-QGGDKYKKGDYKGAIEAYNQAISINPKYSYAYNDRGNARYYL 296

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + A+ D+ +AI+ NP    A+  RG       +   A+ D ++AL+  PN +   + 
Sbjct: 297 GDKQGALKDYNQAIKINPEYAFAYYNRGNILYDFDDKRGALADYNQALKLNPNYSSAYNN 356

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG  ++   D   A+ D +  +K+D  N  AY   G   + +G+ + A   + +AI+++ 
Sbjct: 357 RGNSHYALGDKQRALADYNLAIKVDPGNSEAYYNRGNTRAILGDKQGAITDYNQAIKINP 416

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N++ A+ +      DL + + A+    Q + I+   S AY+ RG   + LG  + A+ D 
Sbjct: 417 NYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSSAYNGRGNSRYYLGDKQGALNDY 476

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY---- 664
           +  L  +P+N E  Y R +    + +   AI DY+ A+ L  +    +  +  AFY    
Sbjct: 477 TLALKANPNNAEAYYNRGNARSDLKDSPAAIADYNEAIKLNPNYSAAYNGRGNAFYYLGE 536

Query: 665 -QKEIALYT 672
            QK +A Y+
Sbjct: 537 KQKALADYS 545



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 145/287 (50%), Gaps = 5/287 (1%)

Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
           K+  +T  +++  I+ ++  +   RG  + + G Y  AI+ + Q +K +P +  A  GRG
Sbjct: 401 KQGAITDYNQAIKINPNYVFAYNNRGNTRYDLGDYQGAIADYTQAVKINPNHSSAYNGRG 460

Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
            +R +  + + A++D+T A+++NP+  EA+  RG AR+ L +S  AI D ++A++  PN 
Sbjct: 461 NSRYYLGDKQGALNDYTLALKANPNNAEAYYNRGNARSDLKDSPAAIADYNEAIKLNPNY 520

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           +   + RG   +   +   A+ D S  +K D  N  AY   G     +G  K A   + +
Sbjct: 521 SAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNVYFDLGNKKGAISDYTQ 580

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           AI+++ N+  A+ +      DL + + AL    Q L +   ++ AY+ R  +   LG  +
Sbjct: 581 AIKINPNYAYAYNNRGNTKYDLNDLQGALADYNQALKLLPNYAFAYYNRANVYKNLGDLE 640

Query: 603 KAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDYDAALDL 648
            AI D +  + I+ SN    Y  R    + +GE +  I D + A +L
Sbjct: 641 GAIADYNRAI-INNSNYAQAYQNRGLARYDLGEQQAGISDLEIAANL 686



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 6/201 (2%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           AD  + +G   +K  D+  A+E  +  + ++ +   AY   G A   +G+ + A + + +
Sbjct: 249 ADDFYIQGGDKYKKGDYKGAIEAYNQAISINPKYSYAYNDRGNARYYLGDKQGALKDYNQ 308

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           AI+++  +  A+ +      D  +   AL    Q L ++  +S AY+ RG   + LG  +
Sbjct: 309 AIKINPEYAFAYYNRGNILYDFDDKRGALADYNQALKLNPNYSSAYNNRGNSHYALGDKQ 368

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC-- 660
           +A+ D +  + +DP N E  Y R +    +G+ + AI DY+ A+ +  + +  +  +   
Sbjct: 369 RALADYNLAIKVDPGNSEAYYNRGNTRAILGDKQGAITDYNQAIKINPNYVFAYNNRGNT 428

Query: 661 ---LAFYQKEIALYT-ASKIN 677
              L  YQ  IA YT A KIN
Sbjct: 429 RYDLGDYQGAIADYTQAVKIN 449



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 102/252 (40%), Gaps = 25/252 (9%)

Query: 293 VNERHGRQTNGTHDVHDKLSSDSASLND-------SNTNSESYSKSSISDNKSSDSTESR 345
           +N  H    NG  +    L     +LND       +  N+E+Y       N  SD  +S 
Sbjct: 448 INPNHSSAYNGRGNSRYYLGDKQGALNDYTLALKANPNNAEAYYNRG---NARSDLKDSP 504

Query: 346 SKLSFKWDMLKETSN-----EAKRNKKFCVTRISK-----SKSISVDFRLS-----RGIA 390
           + ++   + +K   N       + N  + +    K     S++I  D   S     RG  
Sbjct: 505 AAIADYNEAIKLNPNYSAAYNGRGNAFYYLGEKQKALADYSQAIKSDANNSEAYYNRGNV 564

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
             + G    AIS + Q +K +P Y  A   RG  +    +L+ A++D+ +A++  P+   
Sbjct: 565 YFDLGNKKGAISDYTQAIKINPNYAYAYNNRGNTKYDLNDLQGALADYNQALKLLPNYAF 624

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+  R      LG+   AI D ++A+    N A     RG+  +   +  A + DL    
Sbjct: 625 AYYNRANVYKNLGDLEGAIADYNRAIINNSNYAQAYQNRGLARYDLGEQQAGISDLEIAA 684

Query: 511 KLDKENKSAYTY 522
            L KE  +A  Y
Sbjct: 685 NLYKEQGNAAAY 696


>gi|291569283|dbj|BAI91555.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 847

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 147/287 (51%), Gaps = 3/287 (1%)

Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N +  +   +++  I+ ++ L+   RG+    +G Y +AI+ +++ ++ +P Y  A   R
Sbjct: 506 NYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNR 565

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G A   Q   EAAI+D+  AI+ NP+   A+  RG A  + G    AI D ++A+E  PN
Sbjct: 566 GFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRSQGNYKAAIADYNRAIEINPN 625

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
             +  + RG  +    ++ AA+ D +  ++++    +AY   G A  S G YK A   + 
Sbjct: 626 YHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYN 685

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +AI+++ N+  A+ +    ++   N E A+    + + I+  ++ AY+ RGL     G +
Sbjct: 686 RAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNY 745

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + AI D +  + I+P+       R   + + G Y  AI DY+ A+++
Sbjct: 746 EAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEI 792



 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 143/287 (49%), Gaps = 3/287 (1%)

Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N +  +   +++  I+ ++ L+   RG A   +G Y +AI+ +++ ++ +P Y  A   R
Sbjct: 438 NYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNR 497

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G A   Q   EAAI+D+  AI+ NP+   A+  RG      G    AI D ++A+E  PN
Sbjct: 498 GFAHRRQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPN 557

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A   + RG  + +  ++ AA+ D +  ++++     AY   G A  S G YK A   + 
Sbjct: 558 YALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRSQGNYKAAIADYN 617

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +AI+++ N+  A+ +    ++   N E A+    + + I+  +  AY+ RG      G +
Sbjct: 618 RAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNY 677

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           K AI D +  + I+P+       R   + + G Y  AI DY+ A+++
Sbjct: 678 KAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEI 724



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 157/326 (48%), Gaps = 9/326 (2%)

Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N +  +   +++  I+ ++ L+   RG A   +G Y +AI+ +++ ++ +P Y  A  GR
Sbjct: 472 NYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNGR 531

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G     Q   EAAI+D+  AI+ NP+   A+  RG A    G    AI D ++A+E  PN
Sbjct: 532 GLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPN 591

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A   + RG  +    ++ AA+ D +  ++++    +AY   G A  S G Y+ A   + 
Sbjct: 592 YALAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYN 651

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +AI+++ N+  A+ +    ++   N + A+    + + I+  +  AY+ RG      G +
Sbjct: 652 RAIEINPNYHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNY 711

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           + AI D +  + I+P+       R   +   G Y  AI DY+ A+++  +    +  +  
Sbjct: 712 EAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYHNAYNNRGF 771

Query: 662 AF-----YQKEIALYT-ASKINSEFC 681
           A      Y+  IA Y  A +IN  + 
Sbjct: 772 AHRSQGNYEAAIADYNRAIEINPNYA 797



 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 148/302 (49%), Gaps = 6/302 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+    +G Y +AI+ +++ ++ +P Y  A   RG A   Q   EAAI+D+  AI+ N
Sbjct: 428 SRGLTHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEIN 487

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG A    G    AI D ++A+E  PN A   + RG+ + +  ++ AA+ D
Sbjct: 488 PNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNGRGLTHRRQGNYEAAIAD 547

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++     AY   G A    G Y+ A   + +AI+++ N+  A+ +    ++   
Sbjct: 548 YNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNRGFAHRSQG 607

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N + A+    + + I+  +  AY+ RG      G ++ AI D +  + I+P+       R
Sbjct: 608 NYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPNYHNAYNNR 667

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT-ASKINSE 679
              + + G Y+ AI DY+ A+++  +    +  +  A      Y+  IA Y  A +IN  
Sbjct: 668 GFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPN 727

Query: 680 FC 681
           + 
Sbjct: 728 YA 729



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 143/287 (49%), Gaps = 3/287 (1%)

Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N +  +   +++  I+ ++ L+   RG A   +G Y +AI+ +++ ++ +P Y  A   R
Sbjct: 540 NYEAAIADYNRAIEINPNYALAYNNRGFAHRRQGNYEAAIADYNRAIEINPNYALAYNNR 599

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G A   Q   +AAI+D+  AI+ NP+   A+  RG A  + G    AI D ++A+E  PN
Sbjct: 600 GFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYNRAIEINPN 659

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
             +  + RG  +    ++ AA+ D +  ++++    +AY   G A  S G Y+ A   + 
Sbjct: 660 YHNAYNNRGFAHRSQGNYKAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNYEAAIADYN 719

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +AI+++ N+  A+      ++   N E A+    + + I+  +  AY+ RG      G +
Sbjct: 720 RAIEINPNYALAYNGRGLTHRRQGNYEAAIADYNRAIEINPNYHNAYNNRGFAHRSQGNY 779

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + AI D +  + I+P+       R   Y  +GE ++A  D+  A +L
Sbjct: 780 EAAIADYNRAIEINPNYALAYKNRGDAYKVLGEKQKAGSDWQTAANL 826


>gi|386002705|ref|YP_005921004.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
 gi|357210761|gb|AET65381.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
          Length = 660

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 141/589 (23%), Positives = 244/589 (41%), Gaps = 67/589 (11%)

Query: 92  CDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLE-LEELL 150
            D++L LDP L +A++L+G                    E AL+   D +  +E  E  L
Sbjct: 88  LDRSLALDPDLAEAWVLRG--------------------EIALYNLTDREMAVEAFERAL 127

Query: 151 TAAKQDRSVTCEYDVSNSMSSLTVSESGLNA-NDKMSETSEN----HNKSDICDSSSQSR 205
               +D  V   Y++ N++S L   +  L A N  ++   EN    +N+  I  +  +  
Sbjct: 128 GIDPEDGVVW--YELGNALSFLGRVDEALQAYNRSLTIDPENGKAWNNRGLILGALGRYE 185

Query: 206 DVSETCSKS-SHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKST 264
           + + +  ++ S DPDL     +      ++   +  L        +     GS  G+   
Sbjct: 186 EAASSFERAISSDPDLAAAWQNRGNALRALGRPEEALECYASALAIDSGLVGSWKGAAEL 245

Query: 265 --HASRDASEINRQSSDDFDICNGPIDKASVNERH------GRQTNGTHDVHDKLSSDS- 315
                RD   + R    D  +   P DKA+ N+R       GR           L +D  
Sbjct: 246 LRALGRDEEALARL---DGAVGADPGDKAAWNDRGLILGVLGRYEEAVESFDAALRADPG 302

Query: 316 ------------ASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAK 363
                       A+L  S    ESY++S   D   + +  +R +  F  +   E      
Sbjct: 303 YLLAWNNRGLALANLGRSEEALESYNRSIDIDPSFALAWYNRGRALFDLERYDE------ 356

Query: 364 RNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
                 V     +  +   F L+   RG A    G+   A+  +D+ L+ DP Y  A   
Sbjct: 357 -----AVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYDRALEIDPGYEIAWYN 411

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG+    +     AI  F EAI+ NP++ +AW  +G A   +    EA+    KALE +P
Sbjct: 412 RGSVLYLEGRYFDAIKAFDEAIRFNPTSADAWHSKGHALYQMRRPGEALVCYEKALELDP 471

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
             A+  H RG+          A E     ++LD E +  +   G+   S G  ++A    
Sbjct: 472 GRAETWHHRGVALADLNRAAEAAEAFDRALELDPEYEPPWYRKGILAYSSGRPEEALAHF 531

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +A +LD    EAW +       L ++++ALE + + L  D   ++ ++ RG++L  LG+
Sbjct: 532 TRAAELDPGHAEAWNNRGWILFTLGDTDEALESIDRALEADTALAEGWNNRGVVLTALGK 591

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +++A++  +  + IDP++      + +  + +G YREA   Y  AL+L+
Sbjct: 592 NEEALEAYNRTIDIDPAHPRAWNNKGASLYHLGRYREAADCYGRALELD 640



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 148/316 (46%), Gaps = 9/316 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
           +RG+     G+Y  A S F++ +  DP    A   RG A RA  R  E A+  +  A+  
Sbjct: 173 NRGLILGALGRYEEAASSFERAISSDPDLAAAWQNRGNALRALGRP-EEALECYASALAI 231

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +     +WK   +   ALG   EA+  L  A+  +P      ++RG++      +  AVE
Sbjct: 232 DSGLVGSWKGAAELLRALGRDEEALARLDGAVGADPGDKAAWNDRGLILGVLGRYEEAVE 291

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
              A ++ D     A+   GLAL+++G  ++A E++ ++I +D +F  AW +  +   DL
Sbjct: 292 SFDAALRADPGYLLAWNNRGLALANLGRSEEALESYNRSIDIDPSFALAWYNRGRALFDL 351

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+E     L ++  F+ A++ RG  L  LG+ ++A++     L IDP      Y 
Sbjct: 352 ERYDEAVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYDRALEIDPGYEIAWYN 411

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           R S  +  G Y +AIK +D A+     S +       A++ K  ALY   +       ++
Sbjct: 412 RGSVLYLEGRYFDAIKAFDEAIRFNPTSAD-------AWHSKGHALYQMRRPGEALVCYE 464

Query: 685 IDGDIDPLFKEYWCKR 700
              ++DP   E W  R
Sbjct: 465 KALELDPGRAETWHHR 480



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 8/271 (2%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQ-ARAALGESVEAIQDLSKALEFEPNSADILHER 489
           ++ A+S    ++  +P   EAW  RG+ A   L +   A++   +AL  +P    + +E 
Sbjct: 81  IDLALSSLDRSLALDPDLAEAWVLRGEIALYNLTDREMAVEAFERALGIDPEDGVVWYEL 140

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G         + A++  +  + +D EN  A+   GL L ++G Y++A  +  +AI  D +
Sbjct: 141 GNALSFLGRVDEALQAYNRSLTIDPENGKAWNNRGLILGALGRYEEAASSFERAISSDPD 200

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
              AW +     + L   E+ALEC    L ID     ++     LL  LG+ ++A+  L 
Sbjct: 201 LAAAWQNRGNALRALGRPEEALECYASALAIDSGLVGSWKGAAELLRALGRDEEALARLD 260

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
             +G DP +      R      +G Y EA++ +DAAL  +   +       LA+  + +A
Sbjct: 261 GAVGADPGDKAAWNDRGLILGVLGRYEEAVESFDAALRADPGYL-------LAWNNRGLA 313

Query: 670 LYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           L    +       ++   DIDP F   W  R
Sbjct: 314 LANLGRSEEALESYNRSIDIDPSFALAWYNR 344



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/306 (22%), Positives = 139/306 (45%), Gaps = 7/306 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+   A++  D  +  DP    A   RG         E A+  F  A++++P    AW  
Sbjct: 250 GRDEEALARLDGAVGADPGDKAAWNDRGLILGVLGRYEEAVESFDAALRADPGYLLAWNN 309

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A A LG S EA++  +++++ +P+ A   + RG   F  + ++ AVE   + ++++ 
Sbjct: 310 RGLALANLGRSEEALESYNRSIDIDPSFALAWYNRGRALFDLERYDEAVEAYDSALEVEP 369

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
               A+   G AL+++G  ++A E++ +A+++D  +  AW +             A++  
Sbjct: 370 AFALAWNNRGAALAALGREEEALESYDRALEIDPGYEIAWYNRGSVLYLEGRYFDAIKAF 429

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + +  +   + A+H +G  L+ + +  +A+      L +DP   E  + R      +  
Sbjct: 430 DEAIRFNPTSADAWHSKGHALYQMRRPGEALVCYEKALELDPGRAETWHHRGVALADLNR 489

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFK 694
             EA + +D AL+L+ +    +       Y+K I  Y++ +       F    ++DP   
Sbjct: 490 AAEAAEAFDRALELDPEYEPPW-------YRKGILAYSSGRPEEALAHFTRAAELDPGHA 542

Query: 695 EYWCKR 700
           E W  R
Sbjct: 543 EAWNNR 548



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 11/124 (8%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
           L +  + +   D  +R D     A   R + LA L     +L +++++I I  S     Y
Sbjct: 283 LGRYEEAVESFDAALRADPGYLLAWNNRGLALANLGRSEEALESYNRSIDIDPSFALAWY 342

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
                 NR      LE +   +   D AL+++P    A+  +G A +ALGR+EEAL  ++
Sbjct: 343 ------NRGRALFDLERYDEAVEAYDSALEVEPAFALAWNNRGAALAALGREEEALESYD 396

Query: 128 KGYE 131
           +  E
Sbjct: 397 RALE 400



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 6/126 (4%)

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG-LLLHGLGQHKKAI 605
           D    E W    + Y+     + AL  L + L +D   ++A+ LRG + L+ L   + A+
Sbjct: 61  DEESAEGWLEEAERYRQEGAIDLALSSLDRSLALDPDLAEAWVLRGEIALYNLTDREMAV 120

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQC 660
           +     LGIDP +    Y   +    +G   EA++ Y+ +L ++ ++ + +     +L  
Sbjct: 121 EAFERALGIDPEDGVVWYELGNALSFLGRVDEALQAYNRSLTIDPENGKAWNNRGLILGA 180

Query: 661 LAFYQK 666
           L  Y++
Sbjct: 181 LGRYEE 186


>gi|428319962|ref|YP_007117844.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428243642|gb|AFZ09428.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 346

 Score =  130 bits (327), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 82/279 (29%), Positives = 139/279 (49%), Gaps = 34/279 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+    +G Y +AI  FD+IL+ +P   +A   RG    + ++ + AI+D ++A+  NP
Sbjct: 9   RGLHSAKKGNYEAAIDDFDRILQLNPADAKAYNNRGLVYYYMKDYQKAIADLSQALDINP 68

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA+  RG A   LGE  +AI+DL+ AL  +PNS  I + RG+V     ++  A+ED 
Sbjct: 69  NFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAIEDY 128

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + ++  N   Y   G A   +GE                                  
Sbjct: 129 NRALSINSNNYKTYYNRGRAYYLLGE---------------------------------- 154

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A E   Q L ++ ++ KAY  RGL  H LG + +A+ D ++ L IDP N+   Y R 
Sbjct: 155 KEAATENFNQTLRLNPKYIKAYINRGLCYHQLGDNTQAMADYNTALAIDPKNVYAYYNRG 214

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
              + + + + AI+D+D A++L+ + ++ ++ + LA Y+
Sbjct: 215 CVRYKLKQMQLAIEDFDKAVELDPNYVKAYLNRGLALYK 253



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 63/223 (28%), Positives = 103/223 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+       Y  AI+   Q L  +P + EA + RG A     E E AI D   A+ + 
Sbjct: 42  NRGLVYYYMKDYQKAIADLSQALDINPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANK 101

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P++   +  RG   A LG   EAI+D ++AL    N+    + RG   +   +  AA E+
Sbjct: 102 PNSHAIYNNRGLVLANLGNYEEAIEDYNRALSINSNNYKTYYNRGRAYYLLGEKEAATEN 161

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+ +   AY   GL    +G+  +A   +  A+ +D   + A+ +       L 
Sbjct: 162 FNQTLRLNPKYIKAYINRGLCYHQLGDNTQAMADYNTALAIDPKNVYAYYNRGCVRYKLK 221

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             + A+E   + + +D  + KAY  RGL L+ LG    A KD 
Sbjct: 222 QMQLAIEDFDKAVELDPNYVKAYLNRGLALYKLGDIAAANKDF 264



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 49/180 (27%), Positives = 96/180 (53%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            ++RG+ + K  ++ AA++D    ++L+  +  AY   GL    + +Y+KA     +A+ 
Sbjct: 6   FYKRGLHSAKKGNYEAAIDDFDRILQLNPADAKAYNNRGLVYYYMKDYQKAIADLSQALD 65

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++ NF EA+ +    ++ L   EKA+E L   L         Y+ RGL+L  LG +++AI
Sbjct: 66  INPNFFEAYLNRGNAWRHLGEHEKAIEDLNCALANKPNSHAIYNNRGLVLANLGNYEEAI 125

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           +D +  L I+ +N +  Y R   Y+ +GE   A ++++  L L    ++ ++ + L ++Q
Sbjct: 126 EDYNRALSINSNNYKTYYNRGRAYYLLGEKEAATENFNQTLRLNPKYIKAYINRGLCYHQ 185



 Score = 42.4 bits (98), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 45/88 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG+     G    A++ ++  L  DP    A   RG  R   ++++ AI DF +A++ 
Sbjct: 177 INRGLCYHQLGDNTQAMADYNTALAIDPKNVYAYYNRGCVRYKLKQMQLAIEDFDKAVEL 236

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDL 472
           +P+  +A+  RG A   LG+   A +D 
Sbjct: 237 DPNYVKAYLNRGLALYKLGDIAAANKDF 264


>gi|440682547|ref|YP_007157342.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428679666|gb|AFZ58432.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 1409

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 151/294 (51%), Gaps = 8/294 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG+   + G+Y  A++ FD+ L+  P Y E  + RG A  +  E E A++ + +A++ 
Sbjct: 182 LIRGVTLYHLGEYEQAVAFFDKALEFKPDYHEVWLIRGGALDYLGEYEQAVASYDKALEI 241

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   EAW +RG A A LGE  +A+    KALE +P+  ++ + RG++     ++  AV 
Sbjct: 242 KPDYHEAWCKRGVALANLGEYEQAVASYDKALEIKPDYHEVGNNRGLLLVHLGEYQKAVA 301

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +++   +  A+ Y G+AL  +GEY++A  ++ KA+++   + +A  +      +L
Sbjct: 302 SFDKALEIKPNDYDAWHYRGVALGYLGEYEQAVASYNKALEIKPEYHQALSNWGVTLGNL 361

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              +KA+    + L I     +A+  RG+ L  LG+++KA+      L I P++ +    
Sbjct: 362 GEYQKAVASFDKALEIKPDDHEAWCKRGVTLVHLGEYQKAVASFDKALEIKPNDYDAWCN 421

Query: 625 RAS--CYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
           R    C H   +Y +A+  YD AL ++ D  E +      L  L  Y++ +A Y
Sbjct: 422 RGVVLCDH-FRQYEQAVASYDKALQIKPDKYEAWNNRGVALGNLGEYEQAVASY 474



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 146/302 (48%), Gaps = 18/302 (5%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            ++G  Q N G +A AI+ FD+ L+  P Y E  + RG       E E A++ F +A++ 
Sbjct: 148 FNKGYEQYNAGDFAGAIASFDKALEFKPDYYEVWLIRGVTLYHLGEYEQAVAFFDKALEF 207

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   E W  RG A   LGE  +A+    KALE +P+  +   +RG+      ++  AV 
Sbjct: 208 KPDYHEVWLIRGGALDYLGEYEQAVASYDKALEIKPDYHEAWCKRGVALANLGEYEQAVA 267

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
                +++  +        GL L  +GEY+KA  +  KA+++  N  +AW       G+L
Sbjct: 268 SYDKALEIKPDYHEVGNNRGLLLVHLGEYQKAVASFDKALEIKPNDYDAWHYRGVALGYL 327

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
            ++ Q +A+  KALE       I   + +A    G+ L  LG+++KA+      L I P 
Sbjct: 328 GEYEQAVASYNKALE-------IKPEYHQALSNWGVTLGNLGEYQKAVASFDKALEIKPD 380

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF----VLQCLAFYQKEIALYTA 673
           + E    R      +GEY++A+  +D AL+++ +  + +    V+ C  F Q E A+ + 
Sbjct: 381 DHEAWCKRGVTLVHLGEYQKAVASFDKALEIKPNDYDAWCNRGVVLCDHFRQYEQAVASY 440

Query: 674 SK 675
            K
Sbjct: 441 DK 442



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 148/321 (46%), Gaps = 18/321 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N G+Y  A++ +D+ LK  P   +A   RG    +  E E A++ + + ++  
Sbjct: 456 NRGVALGNLGEYEQAVASYDKALKIKPDDYQACFNRGVTLGYLGEYEQAVASYDKVLEFK 515

Query: 446 PSAGEAWKRRGQARA-ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           P   +AW  RG      LG   +A+   +KALE +P+  D    RG+      ++  AV 
Sbjct: 516 PDYYDAWYNRGILLCDNLGRYEQAVASFNKALEIKPDYYDAWCNRGVALDHLGEYEQAVA 575

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +++  ++   +   G+ L  +GEY++A  ++ KA++   ++ +AW         L
Sbjct: 576 SYDKALEIKPDDHETWCKRGVTLDHLGEYEQAVASYDKALKFKPDYHKAWYGRGVTLDHL 635

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             +E+A+    + L     + + ++ RG  L+ LG++++A+      L I P   +    
Sbjct: 636 GENEQAVASYNKALEFKPDYHEVWNSRGNALNNLGEYEQAVASYDKALEIKPDYYDAWCN 695

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF----VLQC-LAFYQKEIALYTASKINSE 679
           R      +GEY +A+  YD AL+ + D  E +    V+ C L  Y++ +A Y        
Sbjct: 696 RGVALDHLGEYEQAVTSYDKALEFKPDKYEAWCNRGVVLCDLGEYEQAVASY-------- 747

Query: 680 FCWFDIDGDIDPLFKEYWCKR 700
               D   +I P   E W  R
Sbjct: 748 ----DKALEIKPDLHEVWINR 764



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 1/279 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR-ELEAAISDFTEAIQ 443
            +RG+     G+Y  A++ +D++L+  P Y +A   RG          E A++ F +A++
Sbjct: 489 FNRGVTLGYLGEYEQAVASYDKVLEFKPDYYDAWYNRGILLCDNLGRYEQAVASFNKALE 548

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
             P   +AW  RG A   LGE  +A+    KALE +P+  +   +RG+      ++  AV
Sbjct: 549 IKPDYYDAWCNRGVALDHLGEYEQAVASYDKALEIKPDDHETWCKRGVTLDHLGEYEQAV 608

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                 +K   +   A+   G+ L  +GE ++A  ++ KA++   ++ E W        +
Sbjct: 609 ASYDKALKFKPDYHKAWYGRGVTLDHLGENEQAVASYNKALEFKPDYHEVWNSRGNALNN 668

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   E+A+    + L I   +  A+  RG+ L  LG++++A+      L   P   E   
Sbjct: 669 LGEYEQAVASYDKALEIKPDYYDAWCNRGVALDHLGEYEQAVTSYDKALEFKPDKYEAWC 728

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            R      +GEY +A+  YD AL+++ D  E ++ + +A
Sbjct: 729 NRGVVLCDLGEYEQAVASYDKALEIKPDLHEVWINRGIA 767



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 157/350 (44%), Gaps = 43/350 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQSN 445
           RG+  V+ G+Y  A++ FD+ L+  P   +A   RG       R+ E A++ + +A+Q  
Sbjct: 388 RGVTLVHLGEYQKAVASFDKALEIKPNDYDAWCNRGVVLCDHFRQYEQAVASYDKALQIK 447

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LGE  +A+    KAL+ +P+       RG+      ++  AV  
Sbjct: 448 PDKYEAWNNRGVALGNLGEYEQAVASYDKALKIKPDDYQACFNRGVTLGYLGEYEQAVAS 507

Query: 506 LSACVKLDKENKSAYTYLGLAL-SSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
               ++   +   A+   G+ L  ++G Y++A  +  KA+++  ++ +AW        HL
Sbjct: 508 YDKVLEFKPDYYDAWYNRGILLCDNLGRYEQAVASFNKALEIKPDYYDAWCNRGVALDHL 567

Query: 558 TQFYQDLANSEKALE---------CLQQV------------------LYIDKRFSKAYHL 590
            ++ Q +A+ +KALE         C + V                  L     + KA++ 
Sbjct: 568 GEYEQAVASYDKALEIKPDDHETWCKRGVTLDHLGEYEQAVASYDKALKFKPDYHKAWYG 627

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RG+ L  LG++++A+   +  L   P   E    R +  + +GEY +A+  YD AL+++ 
Sbjct: 628 RGVTLDHLGENEQAVASYNKALEFKPDYHEVWNSRGNALNNLGEYEQAVASYDKALEIKP 687

Query: 651 DSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           D  +       A+  + +AL    +       +D   +  P   E WC R
Sbjct: 688 DYYD-------AWCNRGVALDHLGEYEQAVTSYDKALEFKPDKYEAWCNR 730



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 17/267 (6%)

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
           TE  +S     + W  +G  +   G+   AI    KALEF+P+  ++   RG+  +   +
Sbjct: 134 TEEDESATDKAKVWFNKGYEQYNAGDFAGAIASFDKALEFKPDYYEVWLIRGVTLYHLGE 193

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  AV      ++   +    +   G AL  +GEY++A  ++ KA+++  ++ EAW    
Sbjct: 194 YEQAVAFFDKALEFKPDYHEVWLIRGGALDYLGEYEQAVASYDKALEIKPDYHEAWCKRG 253

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
               +L   E+A+    + L I   + +  + RGLLL  LG+++KA+      L I P++
Sbjct: 254 VALANLGEYEQAVASYDKALEIKPDYHEVGNNRGLLLVHLGEYQKAVASFDKALEIKPND 313

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTA 673
            +  + R      +GEY +A+  Y+ AL+++ +  +        L  L  YQK +A    
Sbjct: 314 YDAWHYRGVALGYLGEYEQAVASYNKALEIKPEYHQALSNWGVTLGNLGEYQKAVAS--- 370

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKR 700
                    FD   +I P   E WCKR
Sbjct: 371 ---------FDKALEIKPDDHEAWCKR 388


>gi|33862569|ref|NP_894129.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
           9313]
 gi|33640682|emb|CAE20471.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
          Length = 1057

 Score =  129 bits (325), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 168/719 (23%), Positives = 312/719 (43%), Gaps = 108/719 (15%)

Query: 28  RVDSVMASAITARIELAK-LCSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHK 86
           +VD++      A+ EL     ++ +++KAI I D   A +Y      NR    S+    +
Sbjct: 305 QVDNIYLKRGVAKDELGNHQGAIADYTKAIEI-DPQDALAYN-----NRGVAKSKSNDFQ 358

Query: 87  HVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLEL 146
             I DC KA+++D     AY  +G +   LG    A   W+K  E     +A+L   L+ 
Sbjct: 359 GSISDCTKAIEIDSKYAFAYRNRGHSKKELGDLIGASEDWKKAAELGDQGAAEL---LKE 415

Query: 147 EELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRD 206
           E L T +  D+           M  +T+ +   N +D +          D+ D+   +  
Sbjct: 416 ERLKTGSLIDQ-----------MFQVTIGKQSSNESDGL----------DLSDTGDTNGK 454

Query: 207 VSETCSKSSHDPDLCNGRS---------DEAKGGSSVPVSKSGLHINGK------LREVS 251
           + E       +P+  +  S         D+ +G  ++      L IN        +R   
Sbjct: 455 IKELTKVIELNPNYADAYSLRGVAKFQLDDYQG--ALEDFDYALEINPNDAETYFMRGNV 512

Query: 252 ENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKL 311
           +   G ++G+ S ++   A EI+ + +D F   N  + K    +  G   +     ++K 
Sbjct: 513 KGEIGDTEGAISDYSK--AIEIDPKDADAF--TNRGLAKYDSKDYQGAIAD-----YNKA 563

Query: 312 SSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEA-----KRNK 366
                 L D+  N+    K  + D++ + +  ++S L     +    +N        ++ 
Sbjct: 564 IEIDPQLADA-YNNRGLVKDELGDHQGAIADYNKS-LDINPQLADAYNNRGLAKYDSKDY 621

Query: 367 KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
           +  +   +KS  I+  F L+   RG+A+   G +  AI+ +++ ++  P Y  A   RG 
Sbjct: 622 QGAIADYNKSLDINPHFALAYNNRGLAKDELGNHQGAIADYNKAIEIKPQYANAYFNRGN 681

Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
           A++   + + AI+ ++++I+ NP    A+  RG A+  LG++  AI D SKA+E  P+ A
Sbjct: 682 AKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGAIADCSKAIEINPHFA 741

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE-------YKKA 536
              + RG+  +  KD+  A+ D +  +++D ++  AY+  G A S +G+       Y KA
Sbjct: 742 LAYNNRGLAKYDSKDYQGAIADYTKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTKA 801

Query: 537 EE----------------AHL-----------KAIQLDRNFLEAWGHLTQFYQDLANSEK 569
            E                +HL           KAI++D    +A+ +       L +++ 
Sbjct: 802 IEIDPKDAPTYYNRGYAKSHLGDTQGAITDYTKAIEIDPKDSDAYSNRGYAKSHLGDTQG 861

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLL-HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           A+    + + ID + + AY  RGL+    LG H+ AI D +  + I+P      Y R + 
Sbjct: 862 AIADYTKAIEIDPKDADAYSNRGLVKDEELGDHQGAIADYTKAIEINPQYSNAYYNRGNA 921

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQC-----LAFYQKEIALYT-ASKINSEFC 681
              + +Y+EAI DY  A++++      +  +      L  YQ+ IA Y+ A +IN +  
Sbjct: 922 KSELKDYQEAIADYTKAIEIDPKDAPAYYNRGNAKSELKDYQEAIADYSKAIEINPQLA 980



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 153/327 (46%), Gaps = 38/327 (11%)

Query: 376 SKSISVDFRL-----SRGIAQVNEGK-------YASAISIFDQILKEDPMYPEALIGRGT 423
           SK+I +D +      +RGI + + G+       Y  AI+ +D+ +  +P   +A + RG 
Sbjct: 222 SKAIEIDPKNDSAYNNRGIIEDDLGQRKLDDFYYQLAIADYDKAIDINPSNADAYLNRGH 281

Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
            +  QR+ + AI+DF  A+  +P     + +RG A+  LG    AI D +KA+E +P  A
Sbjct: 282 TKLNQRDFDGAIADFNHALNIDPQVDNIYLKRGVAKDELGNHQGAIADYTKAIEIDPQDA 341

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
              + RG+   K  DF  ++ D +  +++D +   AY   G +   +G+   A E   KA
Sbjct: 342 LAYNNRGVAKSKSNDFQGSISDCTKAIEIDSKYAFAYRNRGHSKKELGDLIGASEDWKKA 401

Query: 544 IQLD---------RNFLEAWGHLTQFYQ-----------------DLANSEKALECLQQV 577
            +L             L+    + Q +Q                 D  ++   ++ L +V
Sbjct: 402 AELGDQGAAELLKEERLKTGSLIDQMFQVTIGKQSSNESDGLDLSDTGDTNGKIKELTKV 461

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
           + ++  ++ AY LRG+    L  ++ A++D    L I+P++ E  ++R +    IG+   
Sbjct: 462 IELNPNYADAYSLRGVAKFQLDDYQGALEDFDYALEINPNDAETYFMRGNVKGEIGDTEG 521

Query: 638 AIKDYDAALDLELDSMEKFVLQCLAFY 664
           AI DY  A++++    + F  + LA Y
Sbjct: 522 AISDYSKAIEIDPKDADAFTNRGLAKY 548



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 145/279 (51%), Gaps = 6/279 (2%)

Query: 376  SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            +K+I +D +      +RG A+ + G    AI+ + + ++ DP        RG A++   +
Sbjct: 765  TKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTKAIEIDPKDAPTYYNRGYAKSHLGD 824

Query: 431  LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
             + AI+D+T+AI+ +P   +A+  RG A++ LG++  AI D +KA+E +P  AD    RG
Sbjct: 825  TQGAITDYTKAIEIDPKDSDAYSNRGYAKSHLGDTQGAIADYTKAIEIDPKDADAYSNRG 884

Query: 491  IV-NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            +V + +  D   A+ D +  ++++ +  +AY   G A S + +Y++A   + KAI++D  
Sbjct: 885  LVKDEELGDHQGAIADYTKAIEINPQYSNAYYNRGNAKSELKDYQEAIADYTKAIEIDPK 944

Query: 550  FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
               A+ +      +L + ++A+    + + I+ + + AY+ RGL  +    ++  I D +
Sbjct: 945  DAPAYYNRGNAKSELKDYQEAIADYSKAIEINPQLALAYNNRGLAKYDSKDYQGTIADYN 1004

Query: 610  SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              + IDP        R +    +G  + A +D+  A +L
Sbjct: 1005 KAIEIDPQYANAYKNRGNAKKELGVLKGACEDWKKAAEL 1043



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 7/318 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+     Y  A+  FD  L+ +P   E    RG  +    + E AISD+++AI+ +P
Sbjct: 475 RGVAKFQLDDYQGALEDFDYALEINPNDAETYFMRGNVKGEIGDTEGAISDYSKAIEIDP 534

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG A+    +   AI D +KA+E +P  AD  + RG+V  +  D   A+ D 
Sbjct: 535 KDADAFTNRGLAKYDSKDYQGAIADYNKAIEIDPQLADAYNNRGLVKDELGDHQGAIADY 594

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + ++ +   AY   GLA     +Y+ A   + K++ ++ +F  A+ +      +L N
Sbjct: 595 NKSLDINPQLADAYNNRGLAKYDSKDYQGAIADYNKSLDINPHFALAYNNRGLAKDELGN 654

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + A+    + + I  +++ AY  RG     LG  + AI   S  + I+P      Y R 
Sbjct: 655 HQGAIADYNKAIEIKPQYANAYFNRGNAKSDLGDTQGAIAVYSKSIEINPQYAAAYYNRG 714

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
           +    +G+ + AI D   A+++       F    LA+  + +A Y +         +   
Sbjct: 715 NAKRKLGDNQGAIADCSKAIEIN----PHF---ALAYNNRGLAKYDSKDYQGAIADYTKA 767

Query: 687 GDIDPLFKEYWCKRLHPK 704
            +IDP   + +  R + K
Sbjct: 768 IEIDPKDADAYSNRGYAK 785



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 123/559 (22%), Positives = 229/559 (40%), Gaps = 82/559 (14%)

Query: 9    SRYRLNKTHKTICEIDELVRVDSVMASAITARI----ELAK-LCSLRNWSKAIRILDSLL 63
            ++Y        I + ++ + +D  +A A   R     EL     ++ +++K++ I +  L
Sbjct: 546  AKYDSKDYQGAIADYNKAIEIDPQLADAYNNRGLVKDELGDHQGAIADYNKSLDI-NPQL 604

Query: 64   AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
            A +Y      NR       + ++  I D +K+L ++P    AY  +G A   LG  + A+
Sbjct: 605  ADAYN-----NRGLAKYDSKDYQGAIADYNKSLDINPHFALAYNNRGLAKDELGNHQGAI 659

Query: 124  SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNAND 183
                          AD  + +E++     A  +R    + D+ ++  ++ V    +  N 
Sbjct: 660  --------------ADYNKAIEIKPQYANAYFNRG-NAKSDLGDTQGAIAVYSKSIEINP 704

Query: 184  KMSETSENHN--KSDICDSSSQSRDVSETCSKSSHDPDLCNGRS----DEAKGGSSVPVS 237
            + +    N    K  + D+     D S+    + H     N R     D      ++   
Sbjct: 705  QYAAAYYNRGNAKRKLGDNQGAIADCSKAIEINPHFALAYNNRGLAKYDSKDYQGAIADY 764

Query: 238  KSGLHINGK------LREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKA 291
               + I+ K       R  +++H G + G+ + +    A EI+            P D  
Sbjct: 765  TKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTK--AIEID------------PKDAP 810

Query: 292  SVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFK 351
            +   R      G    H         L D+      Y+K+   D K SD+  +R    + 
Sbjct: 811  TYYNR------GYAKSH---------LGDTQGAITDYTKAIEIDPKDSDAYSNRG---YA 852

Query: 352  WDMLKETSNEAKRNKKFCVTRISKSKSIS---VDFRLSRGIAQVNE-GKYASAISIFDQI 407
               L +T           +   +K+  I     D   +RG+ +  E G +  AI+ + + 
Sbjct: 853  KSHLGDTQG--------AIADYTKAIEIDPKDADAYSNRGLVKDEELGDHQGAIADYTKA 904

Query: 408  LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
            ++ +P Y  A   RG A++  ++ + AI+D+T+AI+ +P    A+  RG A++ L +  E
Sbjct: 905  IEINPQYSNAYYNRGNAKSELKDYQEAIADYTKAIEIDPKDAPAYYNRGNAKSELKDYQE 964

Query: 468  AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
            AI D SKA+E  P  A   + RG+  +  KD+   + D +  +++D +  +AY   G A 
Sbjct: 965  AIADYSKAIEINPQLALAYNNRGLAKYDSKDYQGTIADYNKAIEIDPQYANAYKNRGNAK 1024

Query: 528  SSIGEYKKAEEAHLKAIQL 546
              +G  K A E   KA +L
Sbjct: 1025 KELGVLKGACEDWKKAAEL 1043



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 119/270 (44%), Gaps = 19/270 (7%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G ++  +++   AI D  + I+ N     A+ +R   +  LG+   AI D +KA+E +PN
Sbjct: 62  GKSKLEKKDFYGAIEDLNKEIEINSQDVAAYSKRANLKEKLGDHKGAIDDFTKAIEIDPN 121

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A   + RG   ++  D   A+ D +  + +    K  Y + G+A   IG +  A   + 
Sbjct: 122 HAHPYYNRGFSKWQLGDIQGAIADYNHALAIYPLFKDVYFFRGMAKDQIGNFDGAIADYS 181

Query: 542 KAIQLD-------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           K I++D       R+   A+ H  +      N   A+    + + ID +   AY+ RG++
Sbjct: 182 KVIEIDPDQLYKYRDECSAYFHRGKAKHSSGNISGAIADYSKAIEIDPKNDSAYNNRGII 241

Query: 595 LHGLGQHK-------KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL- 646
              LGQ K        AI D    + I+PSN +    R        ++  AI D++ AL 
Sbjct: 242 EDDLGQRKLDDFYYQLAIADYDKAIDINPSNADAYLNRGHTKLNQRDFDGAIADFNHALN 301

Query: 647 -DLELDSM---EKFVLQCLAFYQKEIALYT 672
            D ++D++          L  +Q  IA YT
Sbjct: 302 IDPQVDNIYLKRGVAKDELGNHQGAIADYT 331



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 122/554 (22%), Positives = 225/554 (40%), Gaps = 72/554 (12%)

Query: 13   LNKTHKTICEIDELVRVDSVMASAITARIELAKLCS------LRNWSKAIRILDSLLAQS 66
            +  T   I +  + + +D   A A T R  LAK  S      + +++KAI I D  LA +
Sbjct: 516  IGDTEGAISDYSKAIEIDPKDADAFTNR-GLAKYDSKDYQGAIADYNKAIEI-DPQLADA 573

Query: 67   YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
            Y      NR     +L  H+  I D +K+L ++P L  AY  +G A       + A++ +
Sbjct: 574  YN-----NRGLVKDELGDHQGAIADYNKSLDINPQLADAYNNRGLAKYDSKDYQGAIADY 628

Query: 127  EKGY------------------EHALHQSA--DLKQFLELEELLTAAKQDRSVTCEYDVS 166
             K                    E   HQ A  D  + +E++     A  +R    + D+ 
Sbjct: 629  NKSLDINPHFALAYNNRGLAKDELGNHQGAIADYNKAIEIKPQYANAYFNRG-NAKSDLG 687

Query: 167  NSMSSLTVSESGLNANDKMSETSENHN--KSDICDSSSQSRDVSETCSKSSHDPDLCNGR 224
            ++  ++ V    +  N + +    N    K  + D+     D S+    + H     N R
Sbjct: 688  DTQGAIAVYSKSIEINPQYAAAYYNRGNAKRKLGDNQGAIADCSKAIEINPHFALAYNNR 747

Query: 225  S----DEAKGGSSVPVSKSGLHINGK------LREVSENHNGSSDGSKSTHASRDASEIN 274
                 D      ++      + I+ K       R  +++H G + G+ + +    A EI+
Sbjct: 748  GLAKYDSKDYQGAIADYTKAIEIDPKDADAYSNRGYAKSHLGDTQGAIADYTK--AIEID 805

Query: 275  RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVH-DKLSSDSAS--------LNDSNTNS 325
             + +  +   N    K+ + +  G  T+ T  +  D   SD+ S        L D+    
Sbjct: 806  PKDAPTY--YNRGYAKSHLGDTQGAITDYTKAIEIDPKDSDAYSNRGYAKSHLGDTQGAI 863

Query: 326  ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR- 384
              Y+K+   D K +D+  +R        ++K+   E   + +  +   +K+  I+  +  
Sbjct: 864  ADYTKAIEIDPKDADAYSNRG-------LVKD---EELGDHQGAIADYTKAIEINPQYSN 913

Query: 385  --LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
               +RG A+     Y  AI+ + + ++ DP    A   RG A++  ++ + AI+D+++AI
Sbjct: 914  AYYNRGNAKSELKDYQEAIADYTKAIEIDPKDAPAYYNRGNAKSELKDYQEAIADYSKAI 973

Query: 443  QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
            + NP    A+  RG A+    +    I D +KA+E +P  A+    RG    +      A
Sbjct: 974  EINPQLALAYNNRGLAKYDSKDYQGTIADYNKAIEIDPQYANAYKNRGNAKKELGVLKGA 1033

Query: 503  VEDLSACVKLDKEN 516
             ED     +L  E+
Sbjct: 1034 CEDWKKAAELGNED 1047



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 26/238 (10%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AI DFT+AI+ +P+    +  RG ++  LG+   AI D + AL   P   D+   RG+
Sbjct: 106 KGAIDDFTKAIEIDPNHAHPYYNRGFSKWQLGDIQGAIADYNHALAIYPLFKDVYFFRGM 165

Query: 492 VNFKFKDFNAAVEDLSACVKLD-------KENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
              +  +F+ A+ D S  +++D       ++  SAY + G A  S G    A   + KAI
Sbjct: 166 AKDQIGNFDGAIADYSKVIEIDPDQLYKYRDECSAYFHRGKAKHSSGNISGAIADYSKAI 225

Query: 545 QLDRNFLEAWGH------------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           ++D     A+ +            L  FY  L     A+    + + I+   + AY  RG
Sbjct: 226 EIDPKNDSAYNNRGIIEDDLGQRKLDDFYYQL-----AIADYDKAIDINPSNADAYLNRG 280

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDYDAALDLE 649
                      AI D +  L IDP  ++ +YL R      +G ++ AI DY  A++++
Sbjct: 281 HTKLNQRDFDGAIADFNHALNIDPQ-VDNIYLKRGVAKDELGNHQGAIADYTKAIEID 337



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 89/210 (42%), Gaps = 34/210 (16%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           +AD   E G    + KDF  A+EDL+  ++++ ++ +AY+        +G++K A +   
Sbjct: 54  NADEYLESGKSKLEKKDFYGAIEDLNKEIEINSQDVAAYSKRANLKEKLGDHKGAIDDFT 113

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KAI++D N      H   +Y                             RG     LG  
Sbjct: 114 KAIEIDPN------HAHPYYN----------------------------RGFSKWQLGDI 139

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           + AI D +  L I P   +  + R      IG +  AI DY   ++++ D + K+  +C 
Sbjct: 140 QGAIADYNHALAIYPLFKDVYFFRGMAKDQIGNFDGAIADYSKVIEIDPDQLYKYRDECS 199

Query: 662 AFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           A++ +  A +++  I+     +    +IDP
Sbjct: 200 AYFHRGKAKHSSGNISGAIADYSKAIEIDP 229


>gi|124024560|ref|YP_001018867.1| hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964846|gb|ABM79602.1| Hypothetical protein P9303_28721 [Prochlorococcus marinus str. MIT
           9303]
          Length = 706

 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 142/272 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+ N G Y  AI+ +++ +  +P + +A   RG A+    + + AISD+ +AI+ +
Sbjct: 423 NRGLAKKNLGDYQGAIADYNKAITINPQHADAFNNRGNAKDGLGDTQGAISDYNKAIELD 482

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG +++ L +   AI D +KA+E  P  AD  + RGI      D   A+ D
Sbjct: 483 PQHTLAYNNRGSSKSDLKDYQGAIPDYNKAIEINPQYADAFNNRGIAKDNSGDHQGAIAD 542

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD ++  A+   G+A  ++G+++ A   + KAI++D  +  A+ +      DL 
Sbjct: 543 YNKAIELDPQHAFAFNNRGIAKDNLGDHQGAIADYNKAIEIDPKYASAYNNRGYAKSDLK 602

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    + + I+ +++ AY  RG   +  G  + A+KD +  L I P++   L  R
Sbjct: 603 DYQGAIADFNKAIAINPQYALAYTNRGWFKYLQGDFQDALKDANKALAITPNDGATLDTR 662

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
               HA+G+ R A KD   A  L      +++
Sbjct: 663 GLAKHALGQDRSACKDLKRASSLGYQGTSQYL 694



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 148/313 (47%), Gaps = 14/313 (4%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AIS  ++ L+ +P Y  A   RG A+   ++ + AI+D+ +AI+ NP     +  RG
Sbjct: 332 YQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINPQHTGPFNNRG 391

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
             +  L +   AI D +KA+E +P  A   + RG+      D+  A+ D +  + ++ ++
Sbjct: 392 NTKKQLKDYQGAIADYNKAIELDPQHAYGYYNRGLAKKNLGDYQGAIADYNKAITINPQH 451

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A+   G A   +G+ + A   + KAI+LD     A+ +      DL + + A+    +
Sbjct: 452 ADAFNNRGNAKDGLGDTQGAISDYNKAIELDPQHTLAYNNRGSSKSDLKDYQGAIPDYNK 511

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            + I+ +++ A++ RG+     G H+ AI D +  + +DP +      R      +G+++
Sbjct: 512 AIEINPQYADAFNNRGIAKDNSGDHQGAIADYNKAIELDPQHAFAFNNRGIAKDNLGDHQ 571

Query: 637 EAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIALYT-ASKINSEFC-------WF 683
            AI DY+ A++++       +   +    L  YQ  IA +  A  IN ++        WF
Sbjct: 572 GAIADYNKAIEIDPKYASAYNNRGYAKSDLKDYQGAIADFNKAIAINPQYALAYTNRGWF 631

Query: 684 D-IDGDIDPLFKE 695
             + GD     K+
Sbjct: 632 KYLQGDFQDALKD 644



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 148/303 (48%), Gaps = 3/303 (0%)

Query: 349 SFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFD 405
           S +   L+  + +A  + +  ++ ++K+  I+  +  +   RG A+     Y  AI+ ++
Sbjct: 315 SMRGYFLRAYAKDALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYN 374

Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
           + ++ +P +      RG  +   ++ + AI+D+ +AI+ +P     +  RG A+  LG+ 
Sbjct: 375 KAIEINPQHTGPFNNRGNTKKQLKDYQGAIADYNKAIELDPQHAYGYYNRGLAKKNLGDY 434

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
             AI D +KA+   P  AD  + RG       D   A+ D +  ++LD ++  AY   G 
Sbjct: 435 QGAIADYNKAITINPQHADAFNNRGNAKDGLGDTQGAISDYNKAIELDPQHTLAYNNRGS 494

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           + S + +Y+ A   + KAI+++  + +A+ +      +  + + A+    + + +D + +
Sbjct: 495 SKSDLKDYQGAIPDYNKAIEINPQYADAFNNRGIAKDNSGDHQGAIADYNKAIELDPQHA 554

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            A++ RG+    LG H+ AI D +  + IDP        R      + +Y+ AI D++ A
Sbjct: 555 FAFNNRGIAKDNLGDHQGAIADYNKAIEIDPKYASAYNNRGYAKSDLKDYQGAIADFNKA 614

Query: 646 LDL 648
           + +
Sbjct: 615 IAI 617



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 153/333 (45%), Gaps = 9/333 (2%)

Query: 373 ISKSKSISVDFRLSRGIA-QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           ++K+ + + D  L++  A Q  +G+  + I +  Q L          + R  A+    + 
Sbjct: 274 VAKNTATTADDYLAQAKASQTKKGREQTVIKLTTQALALRSSMRGYFL-RAYAKDALNDY 332

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AISD  +A++ NP    A++ RG A+  L +   AI D +KA+E  P      + RG 
Sbjct: 333 QGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINPQHTGPFNNRGN 392

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
              + KD+  A+ D +  ++LD ++   Y   GLA  ++G+Y+ A   + KAI ++    
Sbjct: 393 TKKQLKDYQGAIADYNKAIELDPQHAYGYYNRGLAKKNLGDYQGAIADYNKAITINPQHA 452

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +A+ +       L +++ A+    + + +D + + AY+ RG     L  ++ AI D +  
Sbjct: 453 DAFNNRGNAKDGLGDTQGAISDYNKAIELDPQHTLAYNNRGSSKSDLKDYQGAIPDYNKA 512

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           + I+P   +    R       G+++ AI DY+ A  +ELD    F     AF  + IA  
Sbjct: 513 IEINPQYADAFNNRGIAKDNSGDHQGAIADYNKA--IELDPQHAF-----AFNNRGIAKD 565

Query: 672 TASKINSEFCWFDIDGDIDPLFKEYWCKRLHPK 704
                      ++   +IDP +   +  R + K
Sbjct: 566 NLGDHQGAIADYNKAIEIDPKYASAYNNRGYAK 598


>gi|145536925|ref|XP_001454184.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124421929|emb|CAK86787.1| unnamed protein product [Paramecium tetraurelia]
          Length = 393

 Score =  129 bits (324), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 142/276 (51%), Gaps = 14/276 (5%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +VD   ++G A  N  +   AI  +++++  +P   +A   +G A     + E AI  F 
Sbjct: 107 NVDAWHNKGCALGNLNQNEEAIECYNEVISINPRDEQAWYDKGYALGNLNQNEEAIECFN 166

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           EAI  NP   +AW  +G A   L +  EAI+  ++A+   P + D  H +G    K   +
Sbjct: 167 EAIYINPKYVDAWYNKGCALGNLKKYNEAIECYNEAISINPKNVDAWHNKGCALGKLNQY 226

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----- 554
           N A+E  +  + ++++        GL+L+S+ +Y+ A E + +AI +   F++AW     
Sbjct: 227 NEAIECYNEAISINRKFARGCYNKGLSLASLNKYEDAIECYNEAISISPKFVDAWLKKGY 286

Query: 555 --GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
             G+L Q+       E+A+EC  + +YI+ ++  A++ +GL L  L Q+++AI+  +  +
Sbjct: 287 ALGNLNQY-------EEAIECFNEAIYINPKYFNAWYCKGLALRKLNQYEEAIECYNEAI 339

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            I+P N+     +      + +Y EAIK Y+ A+ +
Sbjct: 340 SINPKNVSAWNGKGCALGNLNQYNEAIKCYNEAISI 375



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 125/262 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A  N  +Y  AI  +++ +  +P   +A   +G A     + E AI  + E I  NP
Sbjct: 80  KGCALGNLNQYNEAIECYNEAISINPKNVDAWHNKGCALGNLNQNEEAIECYNEVISINP 139

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  +G A   L ++ EAI+  ++A+   P   D  + +G      K +N A+E  
Sbjct: 140 RDEQAWYDKGYALGNLNQNEEAIECFNEAIYINPKYVDAWYNKGCALGNLKKYNEAIECY 199

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + ++ +N  A+   G AL  + +Y +A E + +AI ++R F     +       L  
Sbjct: 200 NEAISINPKNVDAWHNKGCALGKLNQYNEAIECYNEAISINRKFARGCYNKGLSLASLNK 259

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A+EC  + + I  +F  A+  +G  L  L Q+++AI+  +  + I+P      Y + 
Sbjct: 260 YEDAIECYNEAISISPKFVDAWLKKGYALGNLNQYEEAIECFNEAIYINPKYFNAWYCKG 319

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
                + +Y EAI+ Y+ A+ +
Sbjct: 320 LALRKLNQYEEAIECYNEAISI 341



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/287 (22%), Positives = 137/287 (47%), Gaps = 7/287 (2%)

Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
           Y +A   +G       + E AI  + EAI  +P   +AW ++G A     + +EAI   +
Sbjct: 5   YVKAWNNKGYTLNDLNQYEEAIECYNEAISISPKFVDAWHKKGHALNDFNQYIEAIACYN 64

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           + +   P      +++G        +N A+E  +  + ++ +N  A+   G AL ++ + 
Sbjct: 65  EVISINPRDEQAWYDKGCALGNLNQYNEAIECYNEAISINPKNVDAWHNKGCALGNLNQN 124

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           ++A E + + I ++    +AW        +L  +E+A+EC  + +YI+ ++  A++ +G 
Sbjct: 125 EEAIECYNEVISINPRDEQAWYDKGYALGNLNQNEEAIECFNEAIYINPKYVDAWYNKGC 184

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
            L  L ++ +AI+  +  + I+P N++  + +      + +Y EAI+ Y+ A+ +     
Sbjct: 185 ALGNLKKYNEAIECYNEAISINPKNVDAWHNKGCALGKLNQYNEAIECYNEAISIN---- 240

Query: 654 EKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            KF   C   Y K ++L + +K       ++    I P F + W K+
Sbjct: 241 RKFARGC---YNKGLSLASLNKYEDAIECYNEAISISPKFVDAWLKK 284



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 147/308 (47%), Gaps = 10/308 (3%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y  AI  +++ +   P + +A   +G A   F + +EA I+ + E I  NP   +AW  
Sbjct: 21  QYEEAIECYNEAISISPKFVDAWHKKGHALNDFNQYIEA-IACYNEVISINPRDEQAWYD 79

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   L +  EAI+  ++A+   P + D  H +G           A+E  +  + ++ 
Sbjct: 80  KGCALGNLNQYNEAIECYNEAISINPKNVDAWHNKGCALGNLNQNEEAIECYNEVISINP 139

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            ++ A+   G AL ++ + ++A E   +AI ++  +++AW +      +L    +A+EC 
Sbjct: 140 RDEQAWYDKGYALGNLNQNEEAIECFNEAIYINPKYVDAWYNKGCALGNLKKYNEAIECY 199

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + + I+ +   A+H +G  L  L Q+ +AI+  +  + I+       Y +     ++ +
Sbjct: 200 NEAISINPKNVDAWHNKGCALGKLNQYNEAIECYNEAISINRKFARGCYNKGLSLASLNK 259

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP-LF 693
           Y +AI+ Y+ A+ +      KFV    A+ +K  AL   ++       F+    I+P  F
Sbjct: 260 YEDAIECYNEAISIS----PKFV---DAWLKKGYALGNLNQYEEAIECFNEAIYINPKYF 312

Query: 694 KEYWCKRL 701
             ++CK L
Sbjct: 313 NAWYCKGL 320



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 88/175 (50%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +VD   ++G A     +Y  AI  +++ +  +  +      +G + A   + E AI  + 
Sbjct: 209 NVDAWHNKGCALGKLNQYNEAIECYNEAISINRKFARGCYNKGLSLASLNKYEDAIECYN 268

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           EAI  +P   +AW ++G A   L +  EAI+  ++A+   P   +  + +G+   K   +
Sbjct: 269 EAISISPKFVDAWLKKGYALGNLNQYEEAIECFNEAIYINPKYFNAWYCKGLALRKLNQY 328

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             A+E  +  + ++ +N SA+   G AL ++ +Y +A + + +AI +   F++AW
Sbjct: 329 EEAIECYNEAISINPKNVSAWNGKGCALGNLNQYNEAIKCYNEAISISPKFVDAW 383



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 97/209 (46%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD   ++G A  N  KY  AI  +++ +  +P   +A   +G A     +   AI  + E
Sbjct: 176 VDAWYNKGCALGNLKKYNEAIECYNEAISINPKNVDAWHNKGCALGKLNQYNEAIECYNE 235

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI  N         +G + A+L +  +AI+  ++A+   P   D   ++G        + 
Sbjct: 236 AISINRKFARGCYNKGLSLASLNKYEDAIECYNEAISISPKFVDAWLKKGYALGNLNQYE 295

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+E  +  + ++ +  +A+   GLAL  + +Y++A E + +AI ++   + AW      
Sbjct: 296 EAIECFNEAIYINPKYFNAWYCKGLALRKLNQYEEAIECYNEAISINPKNVSAWNGKGCA 355

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYH 589
             +L    +A++C  + + I  +F  A++
Sbjct: 356 LGNLNQYNEAIKCYNEAISISPKFVDAWY 384



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 51/110 (46%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD  L +G A  N  +Y  AI  F++ +  +P Y  A   +G A     + E AI  + E
Sbjct: 278 VDAWLKKGYALGNLNQYEEAIECFNEAIYINPKYFNAWYCKGLALRKLNQYEEAIECYNE 337

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           AI  NP    AW  +G A   L +  EAI+  ++A+   P   D  + + 
Sbjct: 338 AISINPKNVSAWNGKGCALGNLNQYNEAIKCYNEAISISPKFVDAWYNKA 387



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 54/103 (52%)

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++  +++AW +      DL   E+A+EC  + + I  +F  A+H +G  L+   Q+ +AI
Sbjct: 1   MNHKYVKAWNNKGYTLNDLNQYEEAIECYNEAISISPKFVDAWHKKGHALNDFNQYIEAI 60

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              +  + I+P + +  Y +      + +Y EAI+ Y+ A+ +
Sbjct: 61  ACYNEVISINPRDEQAWYDKGCALGNLNQYNEAIECYNEAISI 103


>gi|254414719|ref|ZP_05028484.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196178567|gb|EDX73566.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 942

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 133/278 (47%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            ++G      G++  AI+ +D+ L+  P    A   RGTA     E E AI+ F +A+Q 
Sbjct: 18  FNQGCEYFQLGQFEQAIASYDKALQIKPDDHNAWYNRGTALLNIGEYEEAIASFEKALQF 77

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P + EAW  RG A A LGE  EAI    KA++ +P+S +    RG+   K  ++  A+ 
Sbjct: 78  KPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEAIA 137

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +++  +    +   GL L  +GEY++A  ++ KA+Q   +  E W +      DL
Sbjct: 138 SYDKAIQIKPDKHETWHNWGLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALADL 197

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              EKA+    + L       K +H RG  L  LG+++KAI      L I P   E    
Sbjct: 198 REYEKAIASYDKALQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLS 257

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           R      +GEY +AI  YD AL  + D  + ++ + +A
Sbjct: 258 RGLVLAELGEYEKAIASYDKALQFKPDFHDAWLNRGIA 295



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 121/247 (48%), Gaps = 5/247 (2%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + E AI+ + +A+Q  P    AW  RG A   +GE  EAI    KAL+F+P+S +    R
Sbjct: 29  QFEQAIASYDKALQIKPDDHNAWYNRGTALLNIGEYEEAIASFEKALQFKPDSYEAWLNR 88

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+   K  ++  A+      +++  ++  A+   GLAL+ +GEY++A  ++ KAIQ+  +
Sbjct: 89  GLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEAIASYDKAIQIKPD 148

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             E W +      DL   E+A+    + L       + +H RG  L  L +++KAI    
Sbjct: 149 KHETWHNWGLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALADLREYEKAIASYD 208

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFY 664
             L   P   +  + R      +GEY +AI  YD AL ++ D  E +     VL  L  Y
Sbjct: 209 KALQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLSRGLVLAELGEY 268

Query: 665 QKEIALY 671
           +K IA Y
Sbjct: 269 EKAIASY 275



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 103/217 (47%)

Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
           K  S +  L+RG+A    G+Y  AI+ FD+ ++  P   EA + RG A A   E E AI+
Sbjct: 78  KPDSYEAWLNRGLALAKLGEYEEAITFFDKAIQIKPDSYEAWLNRGLALAKLGEYEEAIA 137

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
            + +AIQ  P   E W   G     LGE  EAI    KAL+ +P+  +  H RG      
Sbjct: 138 SYDKAIQIKPDKHETWHNWGLVLDDLGEYEEAIASYDKALQCKPDLHETWHNRGAALADL 197

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           +++  A+      ++   +    +   G AL  +GEY+KA  ++ KA+Q+  +  EAW  
Sbjct: 198 REYEKAIASYDKALQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIKPDKHEAWLS 257

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
                 +L   EKA+    + L     F  A+  RG+
Sbjct: 258 RGLVLAELGEYEKAIASYDKALQFKPDFHDAWLNRGI 294



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 57/116 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  +  +Y  AI+ +D+ L+  P   +    RG A     E E AI  + +A+Q  
Sbjct: 189 NRGAALADLREYEKAIASYDKALQFKPDLHKTWHNRGKALGDLGEYEKAIVSYDKALQIK 248

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           P   EAW  RG   A LGE  +AI    KAL+F+P+  D    RGI     + +N 
Sbjct: 249 PDKHEAWLSRGLVLAELGEYEKAIASYDKALQFKPDFHDAWLNRGIAAGNSRHYNP 304


>gi|225620560|ref|YP_002721817.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215379|gb|ACN84113.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 257

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 125/222 (56%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           +R+ + AI  F + I+  P+   A+  RG ++  LG+  EAI+D  KA+E  PN  D  +
Sbjct: 16  ERKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYDKAIELNPNDIDFYN 75

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           +RGI  +    +  A++D    ++L+  +  +Y   G+A  ++G+Y+++ + + KAI+L+
Sbjct: 76  DRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYDKAIELN 135

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            N+  A+ +     + L   E+A++   + + +D   S AY+ RGL    LGQ+K+AIKD
Sbjct: 136 HNYSNAYNNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLAKGNLGQYKEAIKD 195

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
               + ++PS  +    R      +G+Y++A+KDY  AL L+
Sbjct: 196 FDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALKLD 237



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 121/228 (53%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+    E KY  AI  FD++++  P    A   RG ++    + + AI D+ +AI+ NP+
Sbjct: 10  GLNYFKERKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYDKAIELNPN 69

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             + +  RG A+  LG+  EAI+D  KA+E  PN +D  + RGI       +  +++D  
Sbjct: 70  DIDFYNDRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYD 129

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+    +AY   G+A   +G+Y++A + + K I+LD N   A+ +      +L   
Sbjct: 130 KAIELNHNYSNAYNNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLAKGNLGQY 189

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           ++A++   + + ++  +S  Y+ RG+    LGQ+K A+KD    L +D
Sbjct: 190 KEAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALKLD 237



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 93/167 (55%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +DF   RGIA+ N G+Y  AI  +D+ ++ +P   ++   RG A+    + E +I D+ +
Sbjct: 71  IDFYNDRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYDK 130

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI+ N +   A+  RG A+  LG+  EAI+D  K +E +PN ++  + RG+       + 
Sbjct: 131 AIELNHNYSNAYNNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLAKGNLGQYK 190

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            A++D    ++L+      Y   G++  ++G+YK A + + KA++LD
Sbjct: 191 EAIKDFDKSIELNPSYSDVYNNRGVSKENLGQYKDALKDYKKALKLD 237



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 97/181 (53%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           S++  +E G+  FK + +  A+E     ++L   N +AY   G++  ++G+YK+A + + 
Sbjct: 2   SSEQYYEEGLNYFKERKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYD 61

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KAI+L+ N ++ +        +L   E+A++   + + ++   S +Y+ RG+    LGQ+
Sbjct: 62  KAIELNPNDIDFYNDRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQY 121

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           +++IKD    + ++ +       R      +G+Y EAIKDYD  ++L+ +    +  + L
Sbjct: 122 EESIKDYDKAIELNHNYSNAYNNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGL 181

Query: 662 A 662
           A
Sbjct: 182 A 182



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 44/80 (55%)

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
           S+ Y+  GL      ++K+AI+     + + P+N    Y R      +G+Y+EAIKDYD 
Sbjct: 3   SEQYYEEGLNYFKERKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYDK 62

Query: 645 ALDLELDSMEKFVLQCLAFY 664
           A++L  + ++ +  + +A Y
Sbjct: 63  AIELNPNDIDFYNDRGIAKY 82



 Score = 43.5 bits (101), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 11/128 (8%)

Query: 9   SRYRLNKTHKTICEIDELVRV-----DSVMASAITARIELAKLCSLRNWSKAIRILDSLL 63
           ++Y L +  + I + D+ + +     DS     I  +       S++++ KAI  L+   
Sbjct: 80  AKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYDKAIE-LNHNY 138

Query: 64  AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           + +Y      NR      L  ++  I+D DK ++LDP    AY  +G A   LG+ +EA+
Sbjct: 139 SNAY-----NNRGIAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLAKGNLGQYKEAI 193

Query: 124 SVWEKGYE 131
             ++K  E
Sbjct: 194 KDFDKSIE 201



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 50  RNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
           R + +AI   D ++  +    +   NR      L  +K  I+D DKA++L+P  +  Y  
Sbjct: 17  RKYKEAIESFDKVIELAPNNSNAYYNRGVSKENLGQYKEAIKDYDKAIELNPNDIDFYND 76

Query: 109 KGCAFSALGRKEEALSVWEKGYE 131
           +G A   LG+ EEA+  ++K  E
Sbjct: 77  RGIAKYNLGQYEEAIKDYDKAIE 99


>gi|119509305|ref|ZP_01628455.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
 gi|119466147|gb|EAW47034.1| hypothetical protein N9414_15180 [Nodularia spumigena CCY9414]
          Length = 608

 Score =  128 bits (322), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 132/258 (51%), Gaps = 8/258 (3%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI+ FDQ L+ +P + EA   R  AR F  + E AI+DF +AI+  P+  +++  RG
Sbjct: 54  YHGAIANFDQALEINPQFAEAYCNRANARYFLGDYEGAIADFDQAIEIKPNFTQSYHSRG 113

Query: 457 QARAALGESVEAIQDLSKALEFEPNSA-----DI---LHERGIVNFKFKDFNAAVEDLSA 508
            A  AL +  +AI +  +A+E  P  A     DI   LH RG+    + D+  A+ D   
Sbjct: 114 NAYLALEKYDQAIANYQQAIENSPELATQINCDIAKALHNRGVARCNYGDYQGAIADFQQ 173

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++       AY+  G     +GEY++A   H +A+QLD N  E + +       L +++
Sbjct: 174 ALQWHPYFAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARYALGDNQ 233

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A++     L I   F++AY+ RGL+   L    +AI D +  L ++P +++    R   
Sbjct: 234 GAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERGLI 293

Query: 629 YHAIGEYREAIKDYDAAL 646
              +GEY +A++DY  AL
Sbjct: 294 RETLGEYYQALEDYSQAL 311



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 150/301 (49%), Gaps = 3/301 (0%)

Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
           K+D       +A  N     T+I+   + ++    +RG+A+ N G Y  AI+ F Q L+ 
Sbjct: 121 KYDQAIANYQQAIENSPELATQINCDIAKALH---NRGVARCNYGDYQGAIADFQQALQW 177

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
            P +  A   RG       E + AI++   A+Q +P+  E +  RG AR ALG++  AI+
Sbjct: 178 HPYFAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARYALGDNQGAIK 237

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D + AL+ +P+ A+  + RG+V  + KDF  A+ D +  + L+ ++  AY+  GL   ++
Sbjct: 238 DYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERGLIRETL 297

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           GEY +A E + +A+Q +      +G      + L + + A++   Q L +    ++ Y  
Sbjct: 298 GEYYQALEDYSQALQKNPTLALVYGLRANVRRLLGDYQGAIDDSNQSLKLHPHLAQGYCD 357

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           R       G ++ A++D +  L I+ +  E  Y RA  Y  + ++  A+ D   A+ +  
Sbjct: 358 RATTRRIQGDYQGAVQDYTMALQINCNLAEAYYGRAIAYEFLQDFAAAVADNTQAIQMFP 417

Query: 651 D 651
           D
Sbjct: 418 D 418



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 136/287 (47%), Gaps = 9/287 (3%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISD 437
           ++ D    +G  +  +G Y  AI+ + Q ++  P Y EA    G   + + ++   AI++
Sbjct: 1   MNADEFFQQGFNKHLQGDYQEAIANYTQAIQLYPDYAEAYYNLGIILSAELQDYHGAIAN 60

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           F +A++ NP   EA+  R  AR  LG+   AI D  +A+E +PN     H RG      +
Sbjct: 61  FDQALEINPQFAEAYCNRANARYFLGDYEGAIADFDQAIEIKPNFTQSYHSRGNAYLALE 120

Query: 498 DFNAAVEDLSACV--------KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            ++ A+ +    +        +++ +   A    G+A  + G+Y+ A     +A+Q    
Sbjct: 121 KYDQAIANYQQAIENSPELATQINCDIAKALHNRGVARCNYGDYQGAIADFQQALQWHPY 180

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           F  A+      YQ L   ++A+    + L +D   ++ YH RG   + LG ++ AIKD +
Sbjct: 181 FAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARYALGDNQGAIKDYN 240

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             L I P   E  Y R   Y  + ++ +AI D++ AL L  D ++ +
Sbjct: 241 YALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAY 287



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 8/286 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYP--------EALIGRGTARAFQRELEAAISD 437
           SRG A +   KY  AI+ + Q ++  P           +AL  RG AR    + + AI+D
Sbjct: 111 SRGNAYLALEKYDQAIANYQQAIENSPELATQINCDIAKALHNRGVARCNYGDYQGAIAD 170

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           F +A+Q +P    A+  RG     LGE  +AI +  +AL+ +PN A++ H RG   +   
Sbjct: 171 FQQALQWHPYFAPAYSSRGNIYQILGEYQQAIAEHDRALQLDPNLAEVYHNRGNARYALG 230

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           D   A++D +  +K+      AY   GL  S + ++ +A     +A+ L+ + ++A+   
Sbjct: 231 DNQGAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSER 290

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
               + L    +ALE   Q L  +   +  Y LR  +   LG ++ AI D +  L + P 
Sbjct: 291 GLIRETLGEYYQALEDYSQALQKNPTLALVYGLRANVRRLLGDYQGAIDDSNQSLKLHPH 350

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
             +    RA+     G+Y+ A++DY  AL +  +  E +  + +A+
Sbjct: 351 LAQGYCDRATTRRIQGDYQGAVQDYTMALQINCNLAEAYYGRAIAY 396



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 124/261 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+   G    AI  ++  LK  P + EA   RG   +  ++   AI+DF +A+  N
Sbjct: 221 NRGNARYALGDNQGAIKDYNYALKIKPHFAEAYYNRGLVYSRLKDFPQAIADFNQALILN 280

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG  R  LGE  +A++D S+AL+  P  A +   R  V     D+  A++D
Sbjct: 281 PDDVQAYSERGLIRETLGEYYQALEDYSQALQKNPTLALVYGLRANVRRLLGDYQGAIDD 340

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +KL       Y          G+Y+ A + +  A+Q++ N  EA+      Y+ L 
Sbjct: 341 SNQSLKLHPHLAQGYCDRATTRRIQGDYQGAVQDYTMALQINCNLAEAYYGRAIAYEFLQ 400

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +   A+    Q + +   FS AY  RG     L   K+A+ D +  L I+P  +E  Y R
Sbjct: 401 DFAAAVADNTQAIQMFPDFSPAYCNRGNAHRFLRNEKQAMADYNQALAINPDLVEAYYNR 460

Query: 626 ASCYHAIGEYREAIKDYDAAL 646
           A   + + +Y+ A+ DY  AL
Sbjct: 461 ACLRYTLKDYQSAVADYTEAL 481



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 127/264 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+       +  AI+ F+Q L  +P   +A   RG  R    E   A+ D+++A+Q N
Sbjct: 255 NRGLVYSRLKDFPQAIADFNQALILNPDDVQAYSERGLIRETLGEYYQALEDYSQALQKN 314

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    +  R   R  LG+   AI D +++L+  P+ A    +R        D+  AV+D
Sbjct: 315 PTLALVYGLRANVRRLLGDYQGAIDDSNQSLKLHPHLAQGYCDRATTRRIQGDYQGAVQD 374

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++     AY    +A   + ++  A   + +AIQ+  +F  A+ +    ++ L 
Sbjct: 375 YTMALQINCNLAEAYYGRAIAYEFLQDFAAAVADNTQAIQMFPDFSPAYCNRGNAHRFLR 434

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N ++A+    Q L I+    +AY+ R  L + L  ++ A+ D +  L  +P +      R
Sbjct: 435 NEKQAMADYNQALAINPDLVEAYYNRACLRYTLKDYQSAVADYTEALQRNPQSATFYSDR 494

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
           A+  +A+ +Y  AI DY  AL ++
Sbjct: 495 ANARYALQDYHGAIADYHQALAID 518



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 103/221 (46%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G Y  A+  +   L+ +    EA  GR  A  F ++  AA++D T+AIQ  P    A+ 
Sbjct: 365 QGDYQGAVQDYTMALQINCNLAEAYYGRAIAYEFLQDFAAAVADNTQAIQMFPDFSPAYC 424

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG A   L    +A+ D ++AL   P+  +  + R  + +  KD+ +AV D +  ++ +
Sbjct: 425 NRGNAHRFLRNEKQAMADYNQALAINPDLVEAYYNRACLRYTLKDYQSAVADYTEALQRN 484

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            ++ + Y+    A  ++ +Y  A   + +A+ +D +  E W +  +    L +   AL  
Sbjct: 485 PQSATFYSDRANARYALQDYHGAIADYHQALAIDSSRAEDWYNRGRSLSMLGDLTAALAD 544

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           L Q L     ++ AY LR  +   L  ++ AI D      I
Sbjct: 545 LNQALQCQPYWASAYMLRADIRRQLEDYQGAIADFQKSADI 585



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 136/302 (45%), Gaps = 15/302 (4%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
           +++ET  E  +  +     + K+ ++++ + L   + ++  G Y  AI   +Q LK  P 
Sbjct: 292 LIRETLGEYYQALEDYSQALQKNPTLALVYGLRANVRRL-LGDYQGAIDDSNQSLKLHPH 350

Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
             +    R T R  Q + + A+ D+T A+Q N +  EA+  R  A   L +   A+ D +
Sbjct: 351 LAQGYCDRATTRRIQGDYQGAVQDYTMALQINCNLAEAYYGRAIAYEFLQDFAAAVADNT 410

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           +A++  P+ +     RG  +   ++   A+ D +  + ++ +   AY        ++ +Y
Sbjct: 411 QAIQMFPDFSPAYCNRGNAHRFLRNEKQAMADYNQALAINPDLVEAYYNRACLRYTLKDY 470

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ-------QVLYIDKRFSK 586
           + A   + +A+Q  RN   A      FY D AN+  AL+          Q L ID   ++
Sbjct: 471 QSAVADYTEALQ--RNPQSA-----TFYSDRANARYALQDYHGAIADYHQALAIDSSRAE 523

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            ++ RG  L  LG    A+ DL+  L   P       LRA     + +Y+ AI D+  + 
Sbjct: 524 DWYNRGRSLSMLGDLTAALADLNQALQCQPYWASAYMLRADIRRQLEDYQGAIADFQKSA 583

Query: 647 DL 648
           D+
Sbjct: 584 DI 585



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 16/209 (7%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            R IA      +A+A++   Q ++  P +  A   RG A  F R  + A++D+ +A+  N
Sbjct: 391 GRAIAYEFLQDFAAAVADNTQAIQMFPDFSPAYCNRGNAHRFLRNEKQAMADYNQALAIN 450

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA+  R   R  L +   A+ D ++AL+  P SA    +R    +  +D++ A+ D
Sbjct: 451 PDLVEAYYNRACLRYTLKDYQSAVADYTEALQRNPQSATFYSDRANARYALQDYHGAIAD 510

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA--------------EEAHLKAIQLDRNFL 551
               + +D      +   G +LS +G+   A                A++    + R   
Sbjct: 511 YHQALAIDSSRAEDWYNRGRSLSMLGDLTAALADLNQALQCQPYWASAYMLRADIRRQLE 570

Query: 552 EAWGHLTQFYQ--DLANSEKALECLQQVL 578
           +  G +  F +  D+ N +  +E  QQ+L
Sbjct: 571 DYQGAIADFQKSADIYNRDGNIEYYQQIL 599


>gi|333997950|ref|YP_004530562.1| hypothetical protein TREPR_2517 [Treponema primitia ZAS-2]
 gi|333738980|gb|AEF84470.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
          Length = 349

 Score =  127 bits (320), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 84/315 (26%), Positives = 159/315 (50%), Gaps = 10/315 (3%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           + S++ D  L+RGI   +  +Y  AI  ++Q ++ +P Y EA   RG     + E   A+
Sbjct: 28  ADSLNYDEYLNRGIIFADRKEYDRAIGYYNQAIRLNPYYAEAYNNRGVVYVIKGEYTWAM 87

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           +D+TEAI+   +   A+  RG     +G+   A  D + A+  +PN A     RG ++ +
Sbjct: 88  ADYTEAIRLKQNYTFAYNNRGLLFTEIGDYERARNDFTMAITMDPNYAKAYRNRGEIHLR 147

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
             +++ A+ D +  V+L      A+   G A ++ GEY KA   + +AI+++ N++EA  
Sbjct: 148 KGEYDQAILDFNQAVRLSPGYAKAFGSRGDAYANKGEYDKAVADYNQAIRINPNYVEALI 207

Query: 556 HLTQFYQDLANSEKALECLQQVLYID----KRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +    Y D+   ++A     +V+ I+        +AY  RG+  +  G + KAI D +  
Sbjct: 208 NRGNIYYDVGYPDRAKVDYDRVISINLNAGPDLPRAYSNRGVAYNNRGDYGKAIADYNEA 267

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA------FYQ 665
           + ++P+       R + Y  IGEYR AI D++ A+++  +    ++ +  A      + Q
Sbjct: 268 IKLNPNLALAYRHRGAVYANIGEYRLAIDDFNRAIEINPNYATAYISRGKALSYLGEYAQ 327

Query: 666 KEIALYTASKINSEF 680
            +I  + A +IN+++
Sbjct: 328 AQIDYHQAVRINTKY 342



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 4/173 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG A  N+G+Y  A++ ++Q ++ +P Y EALI RG         + A  D+   I  N
Sbjct: 174 SRGDAYANKGEYDKAVADYNQAIRINPNYVEALINRGNIYYDVGYPDRAKVDYDRVISIN 233

Query: 446 PSAG----EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
            +AG     A+  RG A    G+  +AI D ++A++  PN A     RG V     ++  
Sbjct: 234 LNAGPDLPRAYSNRGVAYNNRGDYGKAIADYNEAIKLNPNLALAYRHRGAVYANIGEYRL 293

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           A++D +  ++++    +AY   G ALS +GEY +A+  + +A++++  + E +
Sbjct: 294 AIDDFNRAIEINPNYATAYISRGKALSYLGEYAQAQIDYHQAVRINTKYGEIY 346



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/104 (33%), Positives = 53/104 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N G Y  AI+ +++ +K +P    A   RG   A   E   AI DF  AI+ N
Sbjct: 246 NRGVAYNNRGDYGKAIADYNEAIKLNPNLALAYRHRGAVYANIGEYRLAIDDFNRAIEIN 305

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           P+   A+  RG+A + LGE  +A  D  +A+       +I  +R
Sbjct: 306 PNYATAYISRGKALSYLGEYAQAQIDYHQAVRINTKYGEIYDKR 349


>gi|414078950|ref|YP_006998268.1| TPR repeat-containing serine protease [Anabaena sp. 90]
 gi|413972366|gb|AFW96455.1| TPR repeat-containing serine protease [Anabaena sp. 90]
          Length = 613

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 144/268 (53%), Gaps = 1/268 (0%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF + +G+ + N+G    AI  +++ ++ +P + EA   RG  R+   + + AI+DF +A
Sbjct: 257 DFFI-QGVDKQNKGDNQGAIIAYNEAIRLNPSFAEAYSNRGGIRSNLGDKQGAIADFNQA 315

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +  NP+   A+  RG  R+ LG+   AIQD ++AL+  PN A   + RG V  +  D   
Sbjct: 316 LNFNPNDALAYYNRGGVRSELGDKQAAIQDYNQALKINPNDALAYYNRGGVRSELGDKQG 375

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A++D +  +K++     AY   GLA S  G+ + A + + +A++++ N+  A+ +     
Sbjct: 376 AIQDYNQALKINPNYAEAYINRGLARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLAR 435

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            D  + + A+    Q + I+     AY+ RGL    LG  + AI+D +  + I+P++ + 
Sbjct: 436 YDSGDKQGAIADFNQAIKINPNDDYAYYNRGLARSNLGDKQAAIQDYNQAIKINPNDAQA 495

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLE 649
              R +   A+G+ + AI+DY+ A+ + 
Sbjct: 496 YNNRGATRSALGDKQAAIQDYNQAIKIN 523



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 137/263 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  +   G   +AI  ++Q LK +P    A   RG  R+   + + AI D+ +A++ N
Sbjct: 328 NRGGVRSELGDKQAAIQDYNQALKINPNDALAYYNRGGVRSELGDKQGAIQDYNQALKIN 387

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+  RG AR+  G+   AIQD ++AL+  PN A     RG+  +   D   A+ D
Sbjct: 388 PNYAEAYINRGLARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLARYDSGDKQGAIAD 447

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K++  +  AY   GLA S++G+ + A + + +AI+++ N  +A+ +       L 
Sbjct: 448 FNQAIKINPNDDYAYYNRGLARSNLGDKQAAIQDYNQAIKINPNDAQAYNNRGATRSALG 507

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A++   Q + I+  ++ AY+ RG     LG  + AI D +  + I+P   E  Y R
Sbjct: 508 DKQAAIQDYNQAIKINPNYALAYNNRGNARSALGDKQGAITDFNQAININPKLAEPYYNR 567

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
            +   A+G+ + AI D   A +L
Sbjct: 568 GNARLALGDKQGAISDLQQAANL 590



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 120/225 (53%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AI  + EAI+ NPS  EA+  RG  R+ LG+   AI D ++AL F PN A   + RG 
Sbjct: 272 QGAIIAYNEAIRLNPSFAEAYSNRGGIRSNLGDKQGAIADFNQALNFNPNDALAYYNRGG 331

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V  +  D  AA++D +  +K++  +  AY   G   S +G+ + A + + +A++++ N+ 
Sbjct: 332 VRSELGDKQAAIQDYNQALKINPNDALAYYNRGGVRSELGDKQGAIQDYNQALKINPNYA 391

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           EA+ +      D  + + A++   Q L I+  ++ AY  RGL  +  G  + AI D +  
Sbjct: 392 EAYINRGLARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLARYDSGDKQGAIADFNQA 451

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           + I+P++    Y R      +G+ + AI+DY+ A+ +  +  + +
Sbjct: 452 IKINPNDDYAYYNRGLARSNLGDKQAAIQDYNQAIKINPNDAQAY 496



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 102/192 (53%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG+A+ + G    AI  ++Q LK +P Y  A I RG AR    + + AI+DF +AI+ 
Sbjct: 395 INRGLARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLARYDSGDKQGAIADFNQAIKI 454

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+  RG AR+ LG+   AIQD ++A++  PN A   + RG       D  AA++
Sbjct: 455 NPNDDYAYYNRGLARSNLGDKQAAIQDYNQAIKINPNDAQAYNNRGATRSALGDKQAAIQ 514

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  +K++     AY   G A S++G+ + A     +AI ++    E + +       L
Sbjct: 515 DYNQAIKINPNYALAYNNRGNARSALGDKQGAITDFNQAININPKLAEPYYNRGNARLAL 574

Query: 565 ANSEKALECLQQ 576
            + + A+  LQQ
Sbjct: 575 GDKQGAISDLQQ 586



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 19/181 (10%)

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           +DK+NK             G+ + A  A+ +AI+L+ +F EA+ +      +L + + A+
Sbjct: 263 VDKQNK-------------GDNQGAIIAYNEAIRLNPSFAEAYSNRGGIRSNLGDKQGAI 309

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               Q L  +   + AY+ RG +   LG  + AI+D +  L I+P++    Y R      
Sbjct: 310 ADFNQALNFNPNDALAYYNRGGVRSELGDKQAAIQDYNQALKINPNDALAYYNRGGVRSE 369

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFY-----QKEIALYT-ASKINSEFCWFDI 685
           +G+ + AI+DY+ AL +  +  E ++ + LA       Q  I  Y  A KIN  + +  I
Sbjct: 370 LGDKQGAIQDYNQALKINPNYAEAYINRGLARSDSGDKQGAIQDYNQALKINPNYAYAYI 429

Query: 686 D 686
           +
Sbjct: 430 N 430



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 8/195 (4%)

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           D   A+   +  ++L+     AY+  G   S++G+ + A     +A+  + N   A+ + 
Sbjct: 270 DNQGAIIAYNEAIRLNPSFAEAYSNRGGIRSNLGDKQGAIADFNQALNFNPNDALAYYNR 329

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                +L + + A++   Q L I+   + AY+ RG +   LG  + AI+D +  L I+P+
Sbjct: 330 GGVRSELGDKQAAIQDYNQALKINPNDALAYYNRGGVRSELGDKQGAIQDYNQALKINPN 389

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY-----QKEIALYT 672
             E    R       G+ + AI+DY+ AL +  +    ++ + LA Y     Q  IA + 
Sbjct: 390 YAEAYINRGLARSDSGDKQGAIQDYNQALKINPNYAYAYINRGLARYDSGDKQGAIADFN 449

Query: 673 -ASKINS--EFCWFD 684
            A KIN   ++ +++
Sbjct: 450 QAIKINPNDDYAYYN 464


>gi|282899251|ref|ZP_06307223.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281195859|gb|EFA70784.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 595

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 127/260 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI     G    AI+ F Q++K +P    A   RG +R+   + + AISDFT+ I+ N
Sbjct: 327 NRGILHHELGNKQGAINDFTQVIKLNPGNIRAYYNRGASRSDLGDKQGAISDFTKVIEIN 386

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+  RG AR   G+   AI D ++++   P      + RGI   +  D   A+ D
Sbjct: 387 PNFAEAYNNRGLARRDSGDKQGAITDFTQSINLNPRDPIAYNNRGIARDELGDKPGAISD 446

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  V ++     AY   GLA  ++G+   A     +AI++  NF +A+ +      DL 
Sbjct: 447 FTQAVTINPNFAQAYNNRGLARHNLGDKPGAITDFTQAIKIIPNFAQAYNNRGLSRSDLG 506

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +   A+    Q + I   F++AY+ RGL LH LG  + A+ D +  + I+P+  +    R
Sbjct: 507 DKPGAISDFTQAIKIIPNFAQAYNNRGLALHSLGDKQGAVSDFTQAIKINPNFAQAYNNR 566

Query: 626 ASCYHAIGEYREAIKDYDAA 645
                 +G+   AI D+  A
Sbjct: 567 GLSRSDLGDKEGAISDFKNA 586



 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 122/262 (46%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G    AIS F Q L   P    A   RG         + AI+DFT+ I+ NP    A+  
Sbjct: 302 GDKQGAISDFTQFLTFHPYNALAYYNRGILHHELGNKQGAINDFTQVIKLNPGNIRAYYN 361

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG +R+ LG+   AI D +K +E  PN A+  + RG+      D   A+ D +  + L+ 
Sbjct: 362 RGASRSDLGDKQGAISDFTKVIEINPNFAEAYNNRGLARRDSGDKQGAITDFTQSINLNP 421

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +  AY   G+A   +G+   A     +A+ ++ NF +A+ +      +L +   A+   
Sbjct: 422 RDPIAYNNRGIARDELGDKPGAISDFTQAVTINPNFAQAYNNRGLARHNLGDKPGAITDF 481

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + I   F++AY+ RGL    LG    AI D +  + I P+  +    R    H++G+
Sbjct: 482 TQAIKIIPNFAQAYNNRGLSRSDLGDKPGAISDFTQAIKIIPNFAQAYNNRGLALHSLGD 541

Query: 635 YREAIKDYDAALDLELDSMEKF 656
            + A+ D+  A+ +  +  + +
Sbjct: 542 KQGAVSDFTQAIKINPNFAQAY 563



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 119/238 (50%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T++ K    ++    +RG ++ + G    AIS F ++++ +P + EA   RG AR    +
Sbjct: 346 TQVIKLNPGNIRAYYNRGASRSDLGDKQGAISDFTKVIEINPNFAEAYNNRGLARRDSGD 405

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+DFT++I  NP    A+  RG AR  LG+   AI D ++A+   PN A   + RG
Sbjct: 406 KQGAITDFTQSINLNPRDPIAYNNRGIARDELGDKPGAISDFTQAVTINPNFAQAYNNRG 465

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +      D   A+ D +  +K+      AY   GL+ S +G+   A     +AI++  NF
Sbjct: 466 LARHNLGDKPGAITDFTQAIKIIPNFAQAYNNRGLSRSDLGDKPGAISDFTQAIKIIPNF 525

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            +A+ +       L + + A+    Q + I+  F++AY+ RGL    LG  + AI D 
Sbjct: 526 AQAYNNRGLALHSLGDKQGAVSDFTQAIKINPNFAQAYNNRGLSRSDLGDKEGAISDF 583



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 137/309 (44%), Gaps = 40/309 (12%)

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
           +Y  A   RG  R    + + AI+DFT AI  NP+  +++  R   R  LG+   AI D 
Sbjct: 252 VYAIAYNDRGVNRYQSGDKQGAINDFTAAINVNPNFAKSYYNRAAIRNELGDKQGAISDF 311

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           ++ L F P +A   + RGI++ +  +   A+ D +  +KL+  N  AY   G + S +G+
Sbjct: 312 TQFLTFHPYNALAYYNRGILHHELGNKQGAINDFTQVIKLNPGNIRAYYNRGASRSDLGD 371

Query: 533 YKKAEEAHLKAIQLDRNFLEAW--------------GHLTQFYQ---------------- 562
            + A     K I+++ NF EA+              G +T F Q                
Sbjct: 372 KQGAISDFTKVIEINPNFAEAYNNRGLARRDSGDKQGAITDFTQSINLNPRDPIAYNNRG 431

Query: 563 ----DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
               +L +   A+    Q + I+  F++AY+ RGL  H LG    AI D +  + I P+ 
Sbjct: 432 IARDELGDKPGAISDFTQAVTINPNFAQAYNNRGLARHNLGDKPGAITDFTQAIKIIPNF 491

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY-----QKEIALYT- 672
            +    R      +G+   AI D+  A+ +  +  + +  + LA +     Q  ++ +T 
Sbjct: 492 AQAYNNRGLSRSDLGDKPGAISDFTQAIKIIPNFAQAYNNRGLALHSLGDKQGAVSDFTQ 551

Query: 673 ASKINSEFC 681
           A KIN  F 
Sbjct: 552 AIKINPNFA 560



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 3/154 (1%)

Query: 366 KKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
           K   ++  +++ +I+ +F  +   RG+A+ N G    AI+ F Q +K  P + +A   RG
Sbjct: 440 KPGAISDFTQAVTINPNFAQAYNNRGLARHNLGDKPGAITDFTQAIKIIPNFAQAYNNRG 499

Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
            +R+   +   AISDFT+AI+  P+  +A+  RG A  +LG+   A+ D ++A++  PN 
Sbjct: 500 LSRSDLGDKPGAISDFTQAIKIIPNFAQAYNNRGLALHSLGDKQGAVSDFTQAIKINPNF 559

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           A   + RG+      D   A+ D      L   N
Sbjct: 560 AQAYNNRGLSRSDLGDKEGAISDFKNAAVLFNRN 593


>gi|220922903|ref|YP_002498205.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947510|gb|ACL57902.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 784

 Score =  127 bits (320), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 151/315 (47%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  ++G+Y  AI+ +DQ L+ +P Y  A   RG A   + E + AI+D+  A++ N
Sbjct: 133 NRGDAFRSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLN 192

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A  +  E   AI D  +AL F+P  A+I   RG       ++N A+ D
Sbjct: 193 PEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIAD 252

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD ++  AYT  G A  S GE  +A   + +A++ +  +  A+ +    +++  
Sbjct: 253 FDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKG 312

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+      L +D + + AY+ RGL     G++ +AI D    L +DP +      R
Sbjct: 313 EYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQALRLDPKDAAAYTNR 372

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            + ++  GE+  AI DYD AL L+  S         A+  +  AL    + +      D 
Sbjct: 373 GAAFYRKGEHDRAIADYDEALRLDPKS-------AAAYNGRGAALNKKGEYDRAIADLDQ 425

Query: 686 DGDIDPLFKEYWCKR 700
              + P F   +C R
Sbjct: 426 ALRLKPGFANPYCHR 440



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 137/290 (47%), Gaps = 5/290 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A   +G+Y  AI+ +DQ L+ DP Y    I RG A   + E + AI+D+ +A++ + 
Sbjct: 66  RGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALRLDL 125

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG A  + GE   AI D  +AL F P  A     RG       +++ A+ D 
Sbjct: 126 RDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYAYAYRNRGDAFQSKGEYDRAIADY 185

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L+ E+ +AYT+ GLA  S  EY +A   + +A++ D  +   + +    ++    
Sbjct: 186 DHALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGE 245

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+    Q L +D +   AY  RG      G++ +AI D    L  +P        R 
Sbjct: 246 YNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRG 305

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
             +   GEY  AI DYD AL L+  S   +  + LAF     Y + IA Y
Sbjct: 306 DAFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIADY 355



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 134/282 (47%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG+A   +G+Y  AI+ +DQ L+ D         RG A   + E + AI+D+ +A++ 
Sbjct: 98  INRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRF 157

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A++ RG A  + GE   AI D   AL   P  A     RG+      +++ A+ 
Sbjct: 158 NPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLNPEDAAAYTHRGLAFQSKSEYDRAIA 217

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++ D +  + Y   G A  S GEY +A     +A++LD   + A+      ++  
Sbjct: 218 DYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSK 277

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             +++A+    Q L  + +++ AY  RG      G++ +AI D    L +DP +      
Sbjct: 278 GENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATAYNN 337

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           R   +   GEY  AI DYD AL L+      +  +  AFY+K
Sbjct: 338 RGLAFQNKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRK 379



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 137/277 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  ++ +Y  AI+ +DQ L+ DP Y    I RG A   + E   AI+DF +A++ +P
Sbjct: 202 RGLAFQSKSEYDRAIADYDQALRFDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 261

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            +  A+  RG A  + GE+  AI D  +AL F P  A     RG       +++ A+ D 
Sbjct: 262 KSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADY 321

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++LD ++ +AY   GLA  + GEY +A   + +A++LD     A+ +    +     
Sbjct: 322 DHALRLDPKSATAYNNRGLAFQNKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGE 381

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++A+    + L +D + + AY+ RG  L+  G++ +AI DL   L + P        R 
Sbjct: 382 HDRAIADYDEALRLDPKSAAAYNGRGAALNKKGEYDRAIADLDQALRLKPGFANPYCHRG 441

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +   G+   A+ + + A+ L     + +  + + F
Sbjct: 442 TAFRHKGDLDRALAELNEAVRLNPKYADAYQERGVTF 478



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 134/275 (48%), Gaps = 2/275 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG A  ++G+Y  AI+ FDQ L+ DP    A  GRG A   + E + AI+D+ +A++ 
Sbjct: 234 INRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRF 293

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A++ RG A    GE   AI D   AL  +P SA   + RG+      +++ A+ 
Sbjct: 294 NPKYAYAYRNRGDAFRNKGEYDRAIADYDHALRLDPKSATAYNNRGLAFQNKGEYDRAIA 353

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++LD ++ +AYT  G A    GE+ +A   + +A++LD     A+          
Sbjct: 354 DYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYDEALRLDPKSAAAYNGRGAALNKK 413

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+  L Q L +   F+  Y  RG      G   +A+ +L+  + ++P   +    
Sbjct: 414 GEYDRAIADLDQALRLKPGFANPYCHRGTAFRHKGDLDRALAELNEAVRLNPKYADAYQE 473

Query: 625 RASCYHAIGEYREAIKDYDAALDL--ELDSMEKFV 657
           R   + A GE   A+ D   A+ L  EL++   F+
Sbjct: 474 RGVTFQARGESDRALADLAEAVRLKPELEADATFL 508



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 6/162 (3%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G A  S GEY +A   + +A++LD     A+ H    +      ++A+    Q L +D +
Sbjct: 33  GDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPK 92

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           ++  Y  RGL  +  G++ +AI D    L +D  +      R   + + GEY  AI DYD
Sbjct: 93  YANIYINRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYD 152

Query: 644 AALDLELDSMEKFVLQCLAF-----YQKEIALYT-ASKINSE 679
            AL         +  +  AF     Y + IA Y  A ++N E
Sbjct: 153 QALRFNPKYAYAYRNRGDAFQSKGEYDRAIADYDHALRLNPE 194



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 40/79 (50%)

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y+ RG      G++ +AI D    L +DP +      R   ++  GEY  AI DYD AL 
Sbjct: 29  YYNRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALR 88

Query: 648 LELDSMEKFVLQCLAFYQK 666
           L+      ++ + LAFY+K
Sbjct: 89  LDPKYANIYINRGLAFYRK 107



 Score = 42.7 bits (99), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 18  KTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI-CNRA 76
           + I + D  +R++   A+A T R  LA   S   + +AI   D  L    +  +I  NR 
Sbjct: 180 RAIADYDHALRLNPEDAAAYTHR-GLA-FQSKSEYDRAIADYDQALRFDPKYANIYINRG 237

Query: 77  FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
           + +     +   I D D+AL+LDP  + AY  +G AF + G  + A++ +++
Sbjct: 238 YAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQ 289


>gi|427727407|ref|YP_007073644.1| hypothetical protein Nos7524_0123 [Nostoc sp. PCC 7524]
 gi|427363326|gb|AFY46047.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
          Length = 516

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 136/271 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   N G    AI+ F++ L   P    A   RG ARA    LEAA  DFT++I  N
Sbjct: 200 NRGLIYANLGDLKEAINDFNKSLVLQPKNFIAYYNRGIARAELGYLEAATEDFTKSISIN 259

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA+  RG     LG+  +AI+D  KA+    N A+  H       + +D   A+E 
Sbjct: 260 PKFAEAYNNRGVICRKLGDIKKAIKDFKKAININSNYANAYHNLAFSYQQLRDMKGAIEA 319

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  V ++  +  AY   G+  + +G+ K A E   +++ L+ N+ +++ +       L 
Sbjct: 320 YTQTVLINPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLG 379

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + E A+E   + LYI   F +AY  RG     LG  K AI+D S  L I+P+       R
Sbjct: 380 DIEGAIEDFNRALYISPGFDEAYSNRGNTRKKLGDWKGAIEDYSQALRINPNFYIAYCNR 439

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            + Y  +GE+++AI+DY+ A+++  +  E +
Sbjct: 440 GTAYQYLGEFQKAIEDYEQAININCNFPEAY 470



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 156/320 (48%), Gaps = 8/320 (2%)

Query: 369 CVTRISKSKSIS--VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           C + ++K ++ S   +   ++G+     G    AI  F+Q L     Y EA   RG   A
Sbjct: 147 CYSHVNKHQNDSKLAEAFFNKGLYCAESGDLEEAIQNFNQALNIQSQYTEAYYNRGLIYA 206

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
              +L+ AI+DF +++   P    A+  RG ARA LG    A +D +K++   P  A+  
Sbjct: 207 NLGDLKEAINDFNKSLVLQPKNFIAYYNRGIARAELGYLEAATEDFTKSISINPKFAEAY 266

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + RG++  K  D   A++D    + ++    +AY  L  +   + + K A EA+ + + +
Sbjct: 267 NNRGVICRKLGDIKKAIKDFKKAININSNYANAYHNLAFSYQQLRDMKGAIEAYTQTVLI 326

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           + N  +A+ +      DL +++ A+E   Q L+++  ++K+++ RG++ + LG  + AI+
Sbjct: 327 NPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNYRGIVRNQLGDIEGAIE 386

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCL 661
           D +  L I P   E    R +    +G+++ AI+DY  AL +  +    +       Q L
Sbjct: 387 DFNRALYISPGFDEAYSNRGNTRKKLGDWKGAIEDYSQALRINPNFYIAYCNRGTAYQYL 446

Query: 662 AFYQKEIALY-TASKINSEF 680
             +QK I  Y  A  IN  F
Sbjct: 447 GEFQKAIEDYEQAININCNF 466



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 122/238 (51%), Gaps = 5/238 (2%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +KSIS++ + +     RG+     G    AI  F + +  +  Y  A      +    R+
Sbjct: 253 TKSISINPKFAEAYNNRGVICRKLGDIKKAIKDFKKAININSNYANAYHNLAFSYQQLRD 312

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           ++ AI  +T+ +  NP+  +A+  RG  RA LG++  AI+D +++L   PN A   + RG
Sbjct: 313 MKGAIEAYTQTVLINPNDAQAYYNRGIVRADLGDTKGAIEDFNQSLHLNPNYAKSFNYRG 372

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           IV  +  D   A+ED +  + +      AY+  G     +G++K A E + +A++++ NF
Sbjct: 373 IVRNQLGDIEGAIEDFNRALYISPGFDEAYSNRGNTRKKLGDWKGAIEDYSQALRINPNF 432

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             A+ +    YQ L   +KA+E  +Q + I+  F +AY+ RG +   LG   +AI DL
Sbjct: 433 YIAYCNRGTAYQYLGEFQKAIEDYEQAININCNFPEAYYNRGTIYKLLGNKVRAINDL 490



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 19/262 (7%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+++   G +  AI  ++Q ++ +    +A   RG A A    LE AI D+ EAI  N 
Sbjct: 16  RGMSRAKLGDFEGAIKDYEQAIRINSNLAQAYYNRGMAFAKLGNLEDAIEDYDEAIYINE 75

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EA+  RG  RA L +  EA++D ++A++  P  A+  + R I      D   AV D 
Sbjct: 76  DFAEAYFMRGNLRAGLEKFSEALEDYNEAIDINPYFAEAYYCRSIARSYLGDVEGAVNDF 135

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +  +K++ S Y+                  H+   Q D    EA+ +   +  +  +
Sbjct: 136 NQYI-FNKDDSSCYS------------------HVNKHQNDSKLAEAFFNKGLYCAESGD 176

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A++   Q L I  ++++AY+ RGL+   LG  K+AI D +  L + P N    Y R 
Sbjct: 177 LEEAIQNFNQALNIQSQYTEAYYNRGLIYANLGDLKEAINDFNKSLVLQPKNFIAYYNRG 236

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
                +G    A +D+  ++ +
Sbjct: 237 IARAELGYLEAATEDFTKSISI 258



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 135/320 (42%), Gaps = 49/320 (15%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A    G    AI  +D+ +  +  + EA   RG  RA   +   A+ D+ EAI  N
Sbjct: 49  NRGMAFAKLGNLEDAIEDYDEAIYINEDFAEAYFMRGNLRAGLEKFSEALEDYNEAIDIN 108

Query: 446 PSAGEAWKRRGQARAALGES---------------------------------------- 465
           P   EA+  R  AR+ LG+                                         
Sbjct: 109 PYFAEAYYCRSIARSYLGDVEGAVNDFNQYIFNKDDSSCYSHVNKHQNDSKLAEAFFNKG 168

Query: 466 ---------VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                     EAIQ+ ++AL  +    +  + RG++     D   A+ D +  + L  +N
Sbjct: 169 LYCAESGDLEEAIQNFNQALNIQSQYTEAYYNRGLIYANLGDLKEAINDFNKSLVLQPKN 228

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G+A + +G  + A E   K+I ++  F EA+ +     + L + +KA++  ++
Sbjct: 229 FIAYYNRGIARAELGYLEAATEDFTKSISINPKFAEAYNNRGVICRKLGDIKKAIKDFKK 288

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            + I+  ++ AYH        L   K AI+  +  + I+P++ +  Y R      +G+ +
Sbjct: 289 AININSNYANAYHNLAFSYQQLRDMKGAIEAYTQTVLINPNDAQAYYNRGIVRADLGDTK 348

Query: 637 EAIKDYDAALDLELDSMEKF 656
            AI+D++ +L L  +  + F
Sbjct: 349 GAIEDFNQSLHLNPNYAKSF 368



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 123/275 (44%), Gaps = 25/275 (9%)

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ N  A E +  RG +RA LG+   AI+D  +A+    N A   + RG+   K  +   
Sbjct: 4   IQLNNDADE-FNERGMSRAKLGDFEGAIKDYEQAIRINSNLAQAYYNRGMAFAKLGNLED 62

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------- 554
           A+ED    + ++++   AY   G   + + ++ +A E + +AI ++  F EA+       
Sbjct: 63  AIEDYDEAIYINEDFAEAYFMRGNLRAGLEKFSEALEDYNEAIDINPYFAEAYYCRSIAR 122

Query: 555 -------GHLTQFYQDLANSEKALECLQQV--LYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
                  G +  F Q + N + +  C   V     D + ++A+  +GL     G  ++AI
Sbjct: 123 SYLGDVEGAVNDFNQYIFNKDDS-SCYSHVNKHQNDSKLAEAFFNKGLYCAESGDLEEAI 181

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           ++ +  L I     E  Y R   Y  +G+ +EAI D++ +L L+  +        +A+Y 
Sbjct: 182 QNFNQALNIQSQYTEAYYNRGLIYANLGDLKEAINDFNKSLVLQPKNF-------IAYYN 234

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           + IA      + +    F     I+P F E +  R
Sbjct: 235 RGIARAELGYLEAATEDFTKSISINPKFAEAYNNR 269


>gi|414078029|ref|YP_006997347.1| hypothetical protein ANA_C12830 [Anabaena sp. 90]
 gi|413971445|gb|AFW95534.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 442

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 135/270 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+   ++G Y  A++ FD  L+    +  A I RG         + AI+D+ + I+ NP
Sbjct: 22  QGLDHYHDGNYQQALANFDAALELYANFSMAYINRGNIFHILGNYQKAIADYNQCIKINP 81

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA+  RG +  AL E   AI + +++LE  P      + RG+V  + +D+  A+ D 
Sbjct: 82  NFPEAYHNRGNSYYALQEYQSAISNYNRSLEINPKFGAAYYNRGLVYARIQDYYQAIADF 141

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +K+  ++  AY   GL  S++G+Y+ A + + +A+Q++   +  +G     +  L N
Sbjct: 142 NQALKIVPDDIQAYYERGLVHSNLGDYENAIKDYNQALQINPTLVSVYGFRANAHHHLGN 201

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A+    Q L ID   + AY+ RG++   +     A+ D +  + + P        R 
Sbjct: 202 YENAIIDYNQALQIDPHLATAYYGRGMVREAIQDLIGAVADYTQAIEVSPEFASAYCKRG 261

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             Y  +G  + AI+DY+ AL ++ DS+  +
Sbjct: 262 DAYKLLGNIQTAIQDYNQALKIDSDSLAAY 291



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 149/301 (49%), Gaps = 14/301 (4%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI+ ++Q +K +P +PEA   RG +    +E ++AIS++  +++ NP  G A+  
Sbjct: 64  GNYQKAIADYNQCIKINPNFPEAYHNRGNSYYALQEYQSAISNYNRSLEINPKFGAAYYN 123

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG   A + +  +AI D ++AL+  P+     +ERG+V+    D+  A++D +  ++++ 
Sbjct: 124 RGLVYARIQDYYQAIADFNQALKIVPDDIQAYYERGLVHSNLGDYENAIKDYNQALQINP 183

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKAL 571
              S Y +   A   +G Y+ A   + +A+Q+D +   A+   G + +  QDL     A+
Sbjct: 184 TLVSVYGFRANAHHHLGNYENAIIDYNQALQIDPHLATAYYGRGMVREAIQDLIG---AV 240

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               Q + +   F+ AY  RG     LG  + AI+D +  L ID  ++   Y R S  + 
Sbjct: 241 ADYTQAIEVSPEFASAYCKRGDAYKLLGNIQTAIQDYNQALKIDSDSLAAYYHRGSSRYI 300

Query: 632 IGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-ASKINSEFC--WF 683
             ++  AI D+  AL L+  S   +         L  YQK I+ YT A  IN      WF
Sbjct: 301 AKDFTGAISDFTEALRLDSQSAVFYSDRANARYALKEYQKAISDYTQAISINPNLAEDWF 360

Query: 684 D 684
           +
Sbjct: 361 N 361



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 113/222 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R  A  + G Y +AI  ++Q L+ DP    A  GRG  R   ++L  A++D+T+AI+ +P
Sbjct: 192 RANAHHHLGNYENAIIDYNQALQIDPHLATAYYGRGMVREAIQDLIGAVADYTQAIEVSP 251

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+ +RG A   LG    AIQD ++AL+ + +S    + RG   +  KDF  A+ D 
Sbjct: 252 EFASAYCKRGDAYKLLGNIQTAIQDYNQALKIDSDSLAAYYHRGSSRYIAKDFTGAISDF 311

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++LD ++   Y+    A  ++ EY+KA   + +AI ++ N  E W +  + +  L  
Sbjct: 312 TEALRLDSQSAVFYSDRANARYALKEYQKAISDYTQAISINPNLAEDWFNRGRSHFLLGE 371

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              AL  L Q + +  R+  AY +R  +   LG    AI D 
Sbjct: 372 LNTALADLNQAIQLQPRYPLAYLVRADIHRHLGNQLDAIADF 413



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 135/284 (47%), Gaps = 3/284 (1%)

Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            ++  ++S  I+  F     +RG+       Y  AI+ F+Q LK  P   +A   RG   
Sbjct: 103 AISNYNRSLEINPKFGAAYYNRGLVYARIQDYYQAIADFNQALKIVPDDIQAYYERGLVH 162

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           +   + E AI D+ +A+Q NP+    +  R  A   LG    AI D ++AL+ +P+ A  
Sbjct: 163 SNLGDYENAIKDYNQALQINPTLVSVYGFRANAHHHLGNYENAIIDYNQALQIDPHLATA 222

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG+V    +D   AV D +  +++  E  SAY   G A   +G  + A + + +A++
Sbjct: 223 YYGRGMVREAIQDLIGAVADYTQAIEVSPEFASAYCKRGDAYKLLGNIQTAIQDYNQALK 282

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +D + L A+ H         +   A+    + L +D + +  Y  R    + L +++KAI
Sbjct: 283 IDSDSLAAYYHRGSSRYIAKDFTGAISDFTEALRLDSQSAVFYSDRANARYALKEYQKAI 342

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            D +  + I+P+  E  + R   +  +GE   A+ D + A+ L+
Sbjct: 343 SDYTQAISINPNLAEDWFNRGRSHFLLGELNTALADLNQAIQLQ 386



 Score = 45.4 bits (106), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 50/117 (42%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S S  F   R  A+    +Y  AIS + Q +  +P   E    RG +     EL  A++D
Sbjct: 319 SQSAVFYSDRANARYALKEYQKAISDYTQAISINPNLAEDWFNRGRSHFLLGELNTALAD 378

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
             +AIQ  P    A+  R      LG  ++AI D  K+ +    S +  + + I N 
Sbjct: 379 LNQAIQLQPRYPLAYLVRADIHRHLGNQLDAIADFRKSADLYSQSGNTRYYQEITNL 435


>gi|148679828|gb|EDL11775.1| mCG9222, isoform CRA_b [Mus musculus]
          Length = 502

 Score =  127 bits (318), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 186/421 (44%), Gaps = 82/421 (19%)

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK-DYDAALDLELD 651
           ++L+  G  ++A+K+    L ++P N  C Y++   + A+G++ E IK      L+  L 
Sbjct: 1   MMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLP 60

Query: 652 SMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVY 711
             +         Y +E + Y  + +++    ++ID D+   FK++W K L    + +   
Sbjct: 61  GQKASPEYLRVKYLREYSRYLHAHLDTPLTEYNIDSDLPGSFKDHWAKNL--PFLIDGYE 118

Query: 712 RQPPLRDSLKKGKLRRQDFSVTKQKTA-LLLVADSIGKKIQYDCPGFLSNRRQHRMAGLA 770
            QP L+  ++   +  Q+F   K +   L+ VAD +G  +QY+ PGFL N+R HR  GLA
Sbjct: 119 EQPGLQPHIRY--VLHQNFEGYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLA 176

Query: 771 AIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTS 830
           A+E+ Q V + W         +N     NG     K R+                     
Sbjct: 177 ALEVMQAVHRTW---------TNSKVRMNG-----KTRL--------------------- 201

Query: 831 SYGITEERSSGHPKMSWQDVYTLAVKWRQISEPCDPVVWVNKL-SEEFNSGFGSHTPMIL 889
                         + W+D++ +AVKWR+I++P  PV+W++++ +   + GF +H  +I 
Sbjct: 202 --------------LQWRDMFDIAVKWRRIADPDQPVLWLDQMPAPSLSRGFNNHINLIR 247

Query: 890 GQAKVVRYFPNYARTLDVAKTVMKDKKYVH-------------------NKADDIIDLSE 930
           GQ   +RY   + + L      +KD+  V+                   +K +D++ + +
Sbjct: 248 GQVINMRYLEYFEKILH----FIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMK 303

Query: 931 DV---VGEDFWLATWCNSTAFEGKQLEGTRITLVKMGESGYDFAIRTPCTPSRWDEFDAE 987
                  + F + T   S   +GK+ +G  IT+         F++ T  T  R   + AE
Sbjct: 304 QFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAE 363

Query: 988 M 988
           +
Sbjct: 364 I 364


>gi|414078778|ref|YP_006998096.1| hypothetical protein ANA_C13625 [Anabaena sp. 90]
 gi|413972194|gb|AFW96283.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 383

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 131/251 (52%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI  +D++++  P   EAL  RG A     + +AAI D+ + ++ NP+   A+  
Sbjct: 108 GDYRGAILAYDEVIRLTPNNSEALFYRGMAYYNLGDNQAAIQDYNQVLKINPNDANAYIN 167

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG  R ALG+   AIQD ++AL+  PN A+    RG+      D   A+ED +  +K++ 
Sbjct: 168 RGNLRDALGDKQAAIQDYNQALKINPNYAEAYLNRGLTRDDLGDKKGAIEDYNQALKINP 227

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +  +Y   G A   +G+ K A E + +A++++ N   ++ +       L + + A++  
Sbjct: 228 NDAVSYRNRGNARDDLGDKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDY 287

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q L I+  +++AY  RG+    LG  +  I+D +  L I+P+  +  Y R + Y  +G+
Sbjct: 288 NQALKINPNYAEAYLNRGVARDTLGDKQAVIQDFNQALKINPNYAKAYYNRGNAYATLGD 347

Query: 635 YREAIKDYDAA 645
             +AI D+  A
Sbjct: 348 KFQAISDFQQA 358



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 126/245 (51%), Gaps = 3/245 (1%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           V R++ + S ++ +R   G+A  N G   +AI  ++Q+LK +P    A I RG  R    
Sbjct: 120 VIRLTPNNSEALFYR---GMAYYNLGDNQAAIQDYNQVLKINPNDANAYINRGNLRDALG 176

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + +AAI D+ +A++ NP+  EA+  RG  R  LG+   AI+D ++AL+  PN A     R
Sbjct: 177 DKQAAIQDYNQALKINPNYAEAYLNRGLTRDDLGDKKGAIEDYNQALKINPNDAVSYRNR 236

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G       D   A+ED +  +K++  +  +Y   G    ++G+ + A + + +A++++ N
Sbjct: 237 GNARDDLGDKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDYNQALKINPN 296

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           + EA+ +       L + +  ++   Q L I+  ++KAY+ RG     LG   +AI D  
Sbjct: 297 YAEAYLNRGVARDTLGDKQAVIQDFNQALKINPNYAKAYYNRGNAYATLGDKFQAISDFQ 356

Query: 610 SGLGI 614
               I
Sbjct: 357 QAAKI 361



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 109/219 (49%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +   AI  + E I+  P+  EA   RG A   LG++  AIQD ++ L+  PN A+    R
Sbjct: 109 DYRGAILAYDEVIRLTPNNSEALFYRGMAYYNLGDNQAAIQDYNQVLKINPNDANAYINR 168

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G +     D  AA++D +  +K++     AY   GL    +G+ K A E + +A++++ N
Sbjct: 169 GNLRDALGDKQAAIQDYNQALKINPNYAEAYLNRGLTRDDLGDKKGAIEDYNQALKINPN 228

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
              ++ +      DL + + A+E   Q L I+   + +Y  RG L   LG  + AI+D +
Sbjct: 229 DAVSYRNRGNARDDLGDKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDYN 288

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             L I+P+  E    R      +G+ +  I+D++ AL +
Sbjct: 289 QALKINPNYAEAYLNRGVARDTLGDKQAVIQDFNQALKI 327



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 106/201 (52%)

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           +G+   AI    + +   PN+++ L  RG+  +   D  AA++D +  +K++  + +AY 
Sbjct: 107 IGDYRGAILAYDEVIRLTPNNSEALFYRGMAYYNLGDNQAAIQDYNQVLKINPNDANAYI 166

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G    ++G+ + A + + +A++++ N+ EA+ +      DL + + A+E   Q L I+
Sbjct: 167 NRGNLRDALGDKQAAIQDYNQALKINPNYAEAYLNRGLTRDDLGDKKGAIEDYNQALKIN 226

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
              + +Y  RG     LG  K AI+D +  L I+P++      R +   A+G+ + AI+D
Sbjct: 227 PNDAVSYRNRGNARDDLGDKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQD 286

Query: 642 YDAALDLELDSMEKFVLQCLA 662
           Y+ AL +  +  E ++ + +A
Sbjct: 287 YNQALKINPNYAEAYLNRGVA 307


>gi|220922402|ref|YP_002497704.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219947009|gb|ACL57401.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 818

 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 139/271 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  ++G+Y  AI+ +DQ L+ +P YP A   RG     + E + AI+D+ +A++ N
Sbjct: 167 NRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLN 226

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A  +  E   AI D  +AL  +P  A+I   RG       ++N A+ D
Sbjct: 227 PEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIAD 286

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD ++  AYT  G A  S GE  +A   + +A++ +  +  A+ +    +++  
Sbjct: 287 FDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKG 346

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    Q L +D + + AY+ RGL     G++ +AI D    L +DP +      R
Sbjct: 347 EYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNR 406

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            + ++  GE+  AI DY+ AL L+  S   +
Sbjct: 407 GAAFYRKGEHDRAIADYEEALRLDPKSAAAY 437



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 160/337 (47%), Gaps = 15/337 (4%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  ++G+Y  AI+ +DQ L+ DP    A   RG A   + E + AI+D+ +A++ +
Sbjct: 31  NRGDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLD 90

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +  A+  RG A    GE   AI D  +AL  +P  A+I   RG+  ++  +++ A+ D
Sbjct: 91  PKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIAD 150

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD  +   YT  G A  S GEY +A   + +A++ +  +  A+ +    +Q   
Sbjct: 151 YDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKG 210

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    Q L ++   + AY  RGL      ++ +AI D    L +DP        R
Sbjct: 211 EYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINR 270

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK-----EIALY-TASKINSE 679
              + + GEY  AI D+D AL L+  S+  +  +  AF  K      IA Y  A + N +
Sbjct: 271 GYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPK 330

Query: 680 FCW--------FDIDGDIDPLFKEY-WCKRLHPKNVC 707
           + +        F   G+ D    +Y    RL P++  
Sbjct: 331 YAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSAT 367



 Score =  123 bits (308), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 136/282 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG+A   +G+Y  AI+ +DQ L+ D         RG A   + E + AI+D+ +A++ 
Sbjct: 132 INRGLAFYRKGEYDRAIADYDQALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRF 191

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A++ RG    + GE   AI D  +AL   P  A     RG+      +++ A+ 
Sbjct: 192 NPKYPYAYRNRGDTFQSKGEYDRAIADYDQALRLNPEDAAAYTHRGLAFQSKSEYDRAIA 251

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++LD +  + Y   G A  S GEY +A     +A++LD   + A+      ++  
Sbjct: 252 DYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSK 311

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             +++A+    Q L  + +++ AY  RG      G++ +AI D +  L +DP +      
Sbjct: 312 GENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSATAYNN 371

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           R   +   GEY  AI DYD AL L+      +  +  AFY+K
Sbjct: 372 RGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRK 413



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 136/290 (46%), Gaps = 5/290 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A   +G+Y  AI+ +DQ L+ DP Y    I RG A   + E + AI+D+ +A++ + 
Sbjct: 100 RGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYDQALRLDL 159

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG A  + GE   AI D  +AL F P        RG       +++ A+ D 
Sbjct: 160 RDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEYDRAIADY 219

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L+ E+ +AYT+ GLA  S  EY +A   + +A++LD  +   + +    ++    
Sbjct: 220 DQALRLNPEDAAAYTHRGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGE 279

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+    Q L +D +   AY  RG      G++ +AI D    L  +P        R 
Sbjct: 280 YNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRG 339

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
             +   GEY  AI DY  AL L+  S   +  + LAF     Y + IA Y
Sbjct: 340 DAFRNKGEYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIADY 389



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 137/277 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  ++ +Y  AI+ +DQ L+ DP Y    I RG A   + E   AI+DF +A++ +P
Sbjct: 236 RGLAFQSKSEYDRAIADYDQALRLDPKYANIYINRGYAFRSKGEYNRAIADFDQALRLDP 295

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            +  A+  RG A  + GE+  AI D  +AL F P  A     RG       +++ A+ D 
Sbjct: 296 KSVIAYTGRGDAFRSKGENDRAIADYDQALRFNPKYAYAYRNRGDAFRNKGEYDRAIADY 355

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++LD ++ +AY   GLA    GEY +A   + +A++LD     A+ +    +     
Sbjct: 356 TQALRLDPQSATAYNNRGLAFQDKGEYDRAIADYDQALRLDPKDAAAYTNRGAAFYRKGE 415

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++A+   ++ L +D + + AY+ RG  L+  G + +AI DL   L + P      Y R 
Sbjct: 416 HDRAIADYEEALRLDPKSAAAYNGRGAALNKKGDYDRAIADLDQALRLKPGFTNPHYHRG 475

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
             +   G+   A+ D + A+ L     + +  + + F
Sbjct: 476 MAFRHKGDLDRALADLNEAVRLNPKYADAYQERGVTF 512



 Score =  116 bits (290), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 139/275 (50%), Gaps = 2/275 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG A  ++G+Y  AI+ FDQ L+ DP    A  GRG A   + E + AI+D+ +A++ 
Sbjct: 268 INRGYAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQALRF 327

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A++ RG A    GE   AI D ++AL  +P SA   + RG+      +++ A+ 
Sbjct: 328 NPKYAYAYRNRGDAFRNKGEYDRAIADYTQALRLDPQSATAYNNRGLAFQDKGEYDRAIA 387

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++LD ++ +AYT  G A    GE+ +A   + +A++LD     A+          
Sbjct: 388 DYDQALRLDPKDAAAYTNRGAAFYRKGEHDRAIADYEEALRLDPKSAAAYNGRGAALNKK 447

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + ++A+  L Q L +   F+  ++ RG+     G   +A+ DL+  + ++P   +    
Sbjct: 448 GDYDRAIADLDQALRLKPGFTNPHYHRGMAFRHKGDLDRALADLNEAVRLNPKYADAYQE 507

Query: 625 RASCYHAIGEYREAIKDYDAALDL--ELDSMEKFV 657
           R   + A GE   A+ D   A+ L  EL++   F+
Sbjct: 508 RGVTFQARGESDRALADLAEAVRLKPELEADATFL 542



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 15/204 (7%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G A  S GEY +A   + +A++LD     A+ H    +      ++A+    Q L +D +
Sbjct: 33  GDAFRSKGEYDRAIADYDQALRLDPKSAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPK 92

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            + AY  RGL  +  G++ +AI D    L +DP        R   ++  GEY  AI DYD
Sbjct: 93  SAVAYTHRGLAFYRKGEYDRAIADYDQALRLDPKYANIYINRGLAFYRKGEYDRAIADYD 152

Query: 644 AALDLELDSMEKFVLQCLAF-----YQKEIALY-TASKINSEFCW--------FDIDGDI 689
            AL L+L     +  +  AF     Y + IA Y  A + N ++ +        F   G+ 
Sbjct: 153 QALRLDLRDAVVYTNRGDAFRSKGEYDRAIADYDQALRFNPKYPYAYRNRGDTFQSKGEY 212

Query: 690 DPLFKEY-WCKRLHPKNVCEKVYR 712
           D    +Y    RL+P++     +R
Sbjct: 213 DRAIADYDQALRLNPEDAAAYTHR 236



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 18  KTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI-CNRA 76
           + I + D+ +R++   A+A T R  LA   S   + +AI   D  L    +  +I  NR 
Sbjct: 214 RAIADYDQALRLNPEDAAAYTHR-GLA-FQSKSEYDRAIADYDQALRLDPKYANIYINRG 271

Query: 77  FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
           + +     +   I D D+AL+LDP  + AY  +G AF + G  + A++ +++
Sbjct: 272 YAFRSKGEYNRAIADFDQALRLDPKSVIAYTGRGDAFRSKGENDRAIADYDQ 323


>gi|166362921|ref|YP_001655194.1| hypothetical protein MAE_01800, partial [Microcystis aeruginosa
           NIES-843]
 gi|166085294|dbj|BAG00002.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
          Length = 594

 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 172/378 (45%), Gaps = 30/378 (7%)

Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISV-----DFRLSRGI 389
           D+K +D TE    ++F +    E   +   N  F     S  K++ +     +   +RGI
Sbjct: 137 DSKETDLTEVVQDVAFWF----EQGYQKLINGDFIGAIASYDKALEIKPDDHEAWYNRGI 192

Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
           A  N G++A AI+ +D+ L+  P   +A   RG A      LE AI+ + +A++  P   
Sbjct: 193 ALGNLGRFAEAIASYDRALEIKPDLHQAWYNRGIALGNLGRLEEAIASYDQALEIKPDQH 252

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
           EAW  RG A   LG   EAI    KALE +P+  +  + RGI       F  A+      
Sbjct: 253 EAWYNRGIALGNLGRFAEAIASYDKALEIKPDDHEAWYNRGIALGNLGRFAEAIASYDRA 312

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQ 562
           +++  +   A+   G+AL ++G  ++A  ++ +A+++  +  EAW       G+L +F +
Sbjct: 313 LEIKPDLHQAWYNRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAE 372

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            +A+ +KALE       I     +A++ RG  L  LG+  +AI      L I P   +  
Sbjct: 373 AIASYDKALE-------IKPDDHQAWYGRGFALDDLGRFAEAIASYDKALEIKPDYHQAW 425

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCW 682
           Y R      +G + +AI  YD AL+ + D  E +V        + +AL    ++      
Sbjct: 426 YNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWV-------NRGVALGNLGRLEEALAS 478

Query: 683 FDIDGDIDPLFKEYWCKR 700
           +D   +  P   E W  R
Sbjct: 479 YDKALEFKPDLHEAWNNR 496



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 147/322 (45%), Gaps = 21/322 (6%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G++A AI+ +D+ L+  P   EA   RG A         AI+ +  A++  
Sbjct: 257 NRGIALGNLGRFAEAIASYDKALEIKPDDHEAWYNRGIALGNLGRFAEAIASYDRALEIK 316

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   LG   EAI    +ALE +P+  +  + RGI       F  A+  
Sbjct: 317 PDLHQAWYNRGIALGNLGRLEEAIASYDQALEIKPDQHEAWYNRGIALGNLGRFAEAIAS 376

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
               +++  ++  A+   G AL  +G + +A  ++ KA+++  ++ +AW       G+L 
Sbjct: 377 YDKALEIKPDDHQAWYGRGFALDDLGRFAEAIASYDKALEIKPDYHQAWYNRGFALGNLG 436

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           +F Q +A+ ++ALE             +A+  RG+ L  LG+ ++A+      L   P  
Sbjct: 437 RFEQAIASYDRALE-------FKPDLHEAWVNRGVALGNLGRLEEALASYDKALEFKPDL 489

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
            E    R      +  + +A+  YD AL+++ D  E       A+  + IAL    +   
Sbjct: 490 HEAWNNRGIALDNLRRFEQALASYDKALEIKPDLHE-------AWNNRGIALANLRRFEQ 542

Query: 679 EFCWFDIDGDIDPLFKEYWCKR 700
               +D   +I P F + W  R
Sbjct: 543 ALASYDRALEIKPDFHQAWTNR 564



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 140/300 (46%), Gaps = 6/300 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G++A AI+ +D+ L+  P   +A   RG A      LE AI+ + +A++  
Sbjct: 291 NRGIALGNLGRFAEAIASYDRALEIKPDLHQAWYNRGIALGNLGRLEEAIASYDQALEIK 350

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    KALE +P+     + RG        F  A+  
Sbjct: 351 PDQHEAWYNRGIALGNLGRFAEAIASYDKALEIKPDDHQAWYGRGFALDDLGRFAEAIAS 410

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +   A+   G AL ++G +++A  ++ +A++   +  EAW +      +L 
Sbjct: 411 YDKALEIKPDYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLG 470

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+AL    + L       +A++ RG+ L  L + ++A+      L I P   E    R
Sbjct: 471 RLEEALASYDKALEFKPDLHEAWNNRGIALDNLRRFEQALASYDKALEIKPDLHEAWNNR 530

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIA-LYTASKINSE 679
                 +  + +A+  YD AL+++ D  + +      L+ L  + + IA  Y A  I S+
Sbjct: 531 GIALANLRRFEQALASYDRALEIKPDFHQAWTNRGNALRNLGRWAEAIASYYQAVAIKSD 590



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 13/149 (8%)

Query: 355 LKETSNEAKRNKKFCVTRISK------SKSISVDFR-------LSRGIAQVNEGKYASAI 401
           +K   ++A  N+ F +  + +      S   +++F+       ++RG+A  N G+   A+
Sbjct: 417 IKPDYHQAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLGRLEEAL 476

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           + +D+ L+  P   EA   RG A    R  E A++ + +A++  P   EAW  RG A A 
Sbjct: 477 ASYDKALEFKPDLHEAWNNRGIALDNLRRFEQALASYDKALEIKPDLHEAWNNRGIALAN 536

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERG 490
           L    +A+    +ALE +P+       RG
Sbjct: 537 LRRFEQALASYDRALEIKPDFHQAWTNRG 565



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query: 70  QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           Q   NR F    L   +  I   D+AL+  P L +A++ +G A   LGR EEAL+ ++K 
Sbjct: 423 QAWYNRGFALGNLGRFEQAIASYDRALEFKPDLHEAWVNRGVALGNLGRLEEALASYDKA 482

Query: 130 YE 131
            E
Sbjct: 483 LE 484


>gi|300870119|ref|YP_003784990.1| hypothetical protein BP951000_0486 [Brachyspira pilosicoli 95/1000]
 gi|300687818|gb|ADK30489.1| hypothetical protein BP951000_0486 [Brachyspira pilosicoli 95/1000]
          Length = 616

 Score =  125 bits (315), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 144/267 (53%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A+ N G +  AI  ++++++ DP   +A   RG ++ + +  + AI DF + 
Sbjct: 194 DAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLQLFDEAIKDFNKI 253

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++  P+   A+  RG ++  LG   EAI+D +KA+E  PN +D  + RG    +   F  
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKE 313

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ED    +K +  N + Y   G A   +  Y++A + + K I+LD N+++A+ +     
Sbjct: 314 AIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK 373

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           ++L   +++++   + +Y++  +S AY+ RGL    LG +++AIKD    + +   N E 
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEA 433

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
            Y   S  + +   +E+IK YD A++L
Sbjct: 434 YYNIGSAKYDLDLLKESIKYYDKAIEL 460



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 147/277 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           + G+A  N G Y  AI  + + +     Y  A   RG AR+     + AI D+ +AI+ +
Sbjct: 130 TNGVALNNMGSYQYAIDKYSEAIDLIDYYALAYYNRGLARSNLGFFKKAIKDYDKAIELS 189

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  +A+  RG A+   G   EAI+D +K +E +PN+ D  + RG+     + F+ A++D
Sbjct: 190 KNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLQLFDEAIKD 249

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+  N  AY+  G + + +G YK+A E + KAI+++ N+ +A+ +     ++L 
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELG 309

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+E     +  +      Y  RG   + L  +++AIKD    + +D + ++  Y R
Sbjct: 310 LFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNR 369

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           A+    +G Y+E+IKDYD A+ L  +  + +  + LA
Sbjct: 370 ANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLA 406



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 135/268 (50%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG ++   G +  AI  +D  +K +P      + RG A+      E AI D+ + 
Sbjct: 296 DAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKI 355

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ + +  +A+  R  A+  LG   E+I+D  KA+   PN +D  + RG+       +  
Sbjct: 356 IKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEE 415

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A++D    + L  +N  AY  +G A   +   K++ + + KAI+L   + EA+ +     
Sbjct: 416 AIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSK 475

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            DL   ++AL+   + + ++   S  Y+ RGL  + LG +K+AIKD +  + + P     
Sbjct: 476 NDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPDYTNA 535

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLE 649
              R S    +G+Y+EAI+DYD A++LE
Sbjct: 536 YGNRGSAKDELGQYQEAIEDYDKAIELE 563



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 151/306 (49%), Gaps = 34/306 (11%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           ++D   +RG+++     +  AI  F++IL+ +P    A   RG ++      + AI D+ 
Sbjct: 226 NIDAYNNRGVSKNYLQLFDEAIKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYN 285

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI+ NP+  +A+  RG ++  LG   EAI+D   A+++EPN+ +    RG   +  + +
Sbjct: 286 KAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELY 345

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A++D    +KLD     AY     A   +G YK++ + + KAI L+ N+ +A+ +   
Sbjct: 346 EEAIKDYDKIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGL 405

Query: 560 FYQDLANSEKALECLQQ----------------------------VLYIDK------RFS 585
              DL   E+A++  ++                            + Y DK       +S
Sbjct: 406 AKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYS 465

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           +AY+ RGL  + LG +K+A+KD    + ++P++      R    +++G Y+EAIKDY  A
Sbjct: 466 EAYNNRGLSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKA 525

Query: 646 LDLELD 651
           ++L  D
Sbjct: 526 IELTPD 531



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 150/296 (50%), Gaps = 12/296 (4%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---EAAIS 436
           +++  L+RG A+ +   Y  AI  +D+I+K D  Y +A   R  A+   REL   + +I 
Sbjct: 328 NINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK---RELGLYKESIK 384

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           D+ +AI  NP+  +A+  RG A++ LG   EAI+D  ++++   ++ +  +  G   +  
Sbjct: 385 DYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDL 444

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
                +++     ++L      AY   GL+ + +G YK+A + + K+I+L+ N    + +
Sbjct: 445 DLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEALKDYDKSIELNPNDSNTYNN 504

Query: 557 --LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             LT++   L   ++A++   + + +   ++ AY  RG     LGQ+++AI+D    + +
Sbjct: 505 RGLTKY--SLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYQEAIEDYDKAIEL 562

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
           +P+       R       G Y+EA KDY  A  LELD   ++    +A  +KE  L
Sbjct: 563 EPNTAYLYNDRGWVKKNAGLYKEAFKDYKKA--LELDPNNEYAKSNIANLKKERGL 616



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 122/247 (49%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           +I K  +  VD   +R  A+   G Y  +I  +D+ +  +P Y +A   RG A++     
Sbjct: 354 KIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMY 413

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI D+ E+I       EA+   G A+  L    E+I+   KA+E  P  ++  + RG+
Sbjct: 414 EEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGL 473

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                  +  A++D    ++L+  + + Y   GL   S+G YK+A + + KAI+L  ++ 
Sbjct: 474 SKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPDYT 533

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A+G+      +L   ++A+E   + + ++   +  Y+ RG +    G +K+A KD    
Sbjct: 534 NAYGNRGSAKDELGQYQEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEAFKDYKKA 593

Query: 612 LGIDPSN 618
           L +DP+N
Sbjct: 594 LELDPNN 600



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/215 (27%), Positives = 113/215 (52%), Gaps = 4/215 (1%)

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   +G    AI   S+A++     A   + RG+       F  A++D    ++L K 
Sbjct: 132 GVALNNMGSYQYAIDKYSEAIDLIDYYALAYYNRGLARSNLGFFKKAIKDYDKAIELSKN 191

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALEC 573
            K AY   G A ++ G +K+A E + K I+LD N ++A+ +  +++ Y  L   ++A++ 
Sbjct: 192 YKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLQLF--DEAIKD 249

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             ++L ++     AY  RG   + LG +K+AI+D +  + I+P+  +  Y R +    +G
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELG 309

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
            ++EAI+DYD A+  E +++  ++ +  A Y  E+
Sbjct: 310 LFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLEL 344



 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +++++ K I+ LD+    +Y      NRA    +L L+K  I+D DKA+ L+P    AY 
Sbjct: 348 AIKDYDKIIK-LDTNYVDAY-----YNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYN 401

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
            +G A S LG  EEA+    K YE ++   AD
Sbjct: 402 NRGLAKSDLGMYEEAI----KDYEESIDLCAD 429



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 52  WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
           + KAI+  D  +  S   +D   NR F  +   LHK  I D +K ++LDP  + AY  +G
Sbjct: 175 FKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRG 234

Query: 111 CAFSALGRKEEALSVWEK 128
            + + L   +EA+  + K
Sbjct: 235 VSKNYLQLFDEAIKDFNK 252



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           NR      L L+K  I+D  KA++L P    AY  +G A   LG+ +EA+  ++K  E
Sbjct: 504 NRGLTKYSLGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYQEAIEDYDKAIE 561


>gi|428206561|ref|YP_007090914.1| hypothetical protein Chro_1521 [Chroococcidiopsis thermalis PCC
           7203]
 gi|428008482|gb|AFY87045.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Chroococcidiopsis thermalis PCC 7203]
          Length = 379

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 143/316 (45%), Gaps = 8/316 (2%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S+  +F   +G+ +    +YA A+   D  ++  P Y +A   RG A       E AI+ 
Sbjct: 6   SLEAEFFYQQGLRRNKAEQYAEALLSLDVAVEYKPDYADAWSQRGIALGSLNRHEEAIAS 65

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           F  AI   P A   W  RG A   LG  +EA+    +ALEF P++A I H RGI      
Sbjct: 66  FDRAITLRPDASWVWHNRGIALGKLGRYIEALNSFDRALEFNPDAATIWHNRGITLIDLG 125

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
            +  AV +    ++L  +   A+   G AL  + +Y  A ++  +A++   + L  W + 
Sbjct: 126 CYEKAVINFEKTIQLRPDAYWAWYNRGTALGHLKQYAAAVDSFDRALEFQPDDLLTWNNR 185

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                D     KA+    + L ID  +SKA++ +G+ L  LG    A+      + ++P+
Sbjct: 186 GITLSDWGEYTKAVASFDRALAIDPEYSKAWYNKGVALRKLGDFTAAVVCFDRTVELEPN 245

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT 672
           +    Y R      +GE   AI  Y  AL ++   M  +      L  L  YQ+ IA+YT
Sbjct: 246 DFWAWYNRGLSLAQVGEKEAAIASYKHALSIQPQDMAVWYDCGLALYELCRYQEAIAIYT 305

Query: 673 AS---KINSEFCWFDI 685
            +   + ++   W++I
Sbjct: 306 KALEVQPHTPIFWYNI 321



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 117/266 (43%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA    G+Y  A++ FD+ L+ +P        RG         E A+ +F + IQ  
Sbjct: 82  NRGIALGKLGRYIEALNSFDRALEFNPDAATIWHNRGITLIDLGCYEKAVINFEKTIQLR 141

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P A  AW  RG A   L +   A+    +ALEF+P+     + RGI    + ++  AV  
Sbjct: 142 PDAYWAWYNRGTALGHLKQYAAAVDSFDRALEFQPDDLLTWNNRGITLSDWGEYTKAVAS 201

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + +D E   A+   G+AL  +G++  A     + ++L+ N   AW +       + 
Sbjct: 202 FDRALAIDPEYSKAWYNKGVALRKLGDFTAAVVCFDRTVELEPNDFWAWYNRGLSLAQVG 261

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E A+   +  L I  +    ++  GL L+ L ++++AI   +  L + P      Y  
Sbjct: 262 EKEAAIASYKHALSIQPQDMAVWYDCGLALYELCRYQEAIAIYTKALEVQPHTPIFWYNI 321

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
           A CY    +  +A+     A+ +  D
Sbjct: 322 ACCYALQSQAEQAVISLQQAIQISPD 347


>gi|431806834|ref|YP_007233732.1| hypothetical protein BPP43_00585 [Brachyspira pilosicoli P43/6/78]
 gi|430780193|gb|AGA65477.1| hypothetical protein BPP43_00585 [Brachyspira pilosicoli P43/6/78]
          Length = 616

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 143/267 (53%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A+ N G +  AI  ++++++ DP   +A   RG ++ +    + AI DF + 
Sbjct: 194 DAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLELFDEAIKDFNKI 253

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++  P+   A+  RG ++  LG   EAI+D +KA+E  PN +D  + RG    +   F  
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKE 313

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ED    +K +  N + Y   G A   +  Y++A + + K I+LD N+++A+ +     
Sbjct: 314 AIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK 373

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           ++L   +++++   + +Y++  +S AY+ RGL    LG +++AIKD    + +   N E 
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEA 433

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
            Y   S  + +   +E+IK YD A++L
Sbjct: 434 YYNIGSAKYDLDLLKESIKYYDKAIEL 460



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 147/277 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           + G+A  N  +Y  AI  + + +     Y  A   RG AR+     + AI D+ +AI+ +
Sbjct: 130 TNGVALNNMREYRDAIDYYSKAIDLIDYYALAYYNRGLARSNLGFFKKAIKDYDKAIELS 189

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  +A+  RG A+   G   EAI+D +K +E +PN+ D  + RG+     + F+ A++D
Sbjct: 190 KNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRGVSKNYLELFDEAIKD 249

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+  N  AY+  G + + +G YK+A E + KAI+++ N+ +A+ +     ++L 
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELG 309

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+E     +  +      Y  RG   + L  +++AIKD    + +D + ++  Y R
Sbjct: 310 LFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNR 369

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           A+    +G Y+E+IKDYD A+ L  +  + +  + LA
Sbjct: 370 ANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLA 406



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 135/268 (50%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG ++   G +  AI  +D  +K +P      + RG A+      E AI D+ + 
Sbjct: 296 DAYYNRGNSKKELGLFKEAIEDYDNAIKWEPNNINTYLNRGNAKYDLELYEEAIKDYDKI 355

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ + +  +A+  R  A+  LG   E+I+D  KA+   PN +D  + RG+       +  
Sbjct: 356 IKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEE 415

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A++D    + L  +N  AY  +G A   +   K++ + + KAI+L   + EA+ +     
Sbjct: 416 AIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLSK 475

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            DL   ++AL+   + + ++   S  Y+ RGL  + LG +K+AIKD +  + + P     
Sbjct: 476 NDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTKYSLGLYKEAIKDYTKAIKLTPDYTNA 535

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLE 649
              R S    +G+Y+EAI+DYD A++LE
Sbjct: 536 YGNRGSAKDELGQYKEAIEDYDKAIELE 563



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 151/296 (51%), Gaps = 12/296 (4%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---EAAIS 436
           +++  L+RG A+ +   Y  AI  +D+I+K D  Y +A   R  A+   REL   + +I 
Sbjct: 328 NINTYLNRGNAKYDLELYEEAIKDYDKIIKLDTNYVDAYYNRANAK---RELGLYKESIK 384

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           D+ +AI  NP+  +A+  RG A++ LG   EAI+D  ++++   ++ +  +  G   +  
Sbjct: 385 DYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDL 444

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
                +++     ++L      AY   GL+ + +G YK+A + + K+I+L+ +    + +
Sbjct: 445 DLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEALKDYDKSIELNPDDSNTYNN 504

Query: 557 --LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             LT++   L   ++A++   + + +   ++ AY  RG     LGQ+K+AI+D    + +
Sbjct: 505 RGLTKY--SLGLYKEAIKDYTKAIKLTPDYTNAYGNRGSAKDELGQYKEAIEDYDKAIEL 562

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
           +P+       R       G Y+EA+KDY  A  LELD   ++    +A  +KE  L
Sbjct: 563 EPNTAYLYNDRGWVKKNAGLYKEALKDYKKA--LELDPNNEYAKSNIANLKKERGL 616



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 124/247 (50%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           +I K  +  VD   +R  A+   G Y  +I  +D+ +  +P Y +A   RG A++     
Sbjct: 354 KIIKLDTNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMY 413

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI D+ E+I       EA+   G A+  L    E+I+   KA+E  P  ++  + RG+
Sbjct: 414 EEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGL 473

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                  +  A++D    ++L+ ++ + Y   GL   S+G YK+A + + KAI+L  ++ 
Sbjct: 474 SKNDLGLYKEALKDYDKSIELNPDDSNTYNNRGLTKYSLGLYKEAIKDYTKAIKLTPDYT 533

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A+G+      +L   ++A+E   + + ++   +  Y+ RG +    G +K+A+KD    
Sbjct: 534 NAYGNRGSAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKDYKKA 593

Query: 612 LGIDPSN 618
           L +DP+N
Sbjct: 594 LELDPNN 600



 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +++++ K I+ LD+    +Y      NRA    +L L+K  I+D DKA+ L+P    AY 
Sbjct: 348 AIKDYDKIIK-LDTNYVDAY-----YNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYN 401

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
            +G A S LG  EEA+    K YE ++   AD
Sbjct: 402 NRGLAKSDLGMYEEAI----KDYEESIDLCAD 429



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 52  WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
           + KAI+  D  +  S   +D   NR F  +   LHK  I D +K ++LDP  + AY  +G
Sbjct: 175 FKKAIKDYDKAIELSKNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDPNNIDAYNNRG 234

Query: 111 CAFSALGRKEEALSVWEK 128
            + + L   +EA+  + K
Sbjct: 235 VSKNYLELFDEAIKDFNK 252


>gi|427715575|ref|YP_007063569.1| hypothetical protein Cal7507_0234 [Calothrix sp. PCC 7507]
 gi|427348011|gb|AFY30735.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 607

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 154/312 (49%), Gaps = 15/312 (4%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI+ +++ L+ +P + EA   R  AR F  + + AI+D+  A+Q NP   E++  RG
Sbjct: 54  YHGAIADYNRALQINPNFAEAYSNRANARYFLEDYQGAIADYNRALQINPHLSESYHGRG 113

Query: 457 QARAALGESVEAIQDLSKALEFEP--------NSADILHERGIVNFKFKDFNAAVEDLSA 508
           +A  ALG+   AI D  +AL+  P        + A+  H +G+      D   A+ D + 
Sbjct: 114 KASKALGDYETAIADYRQALQINPQLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQ 173

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++L     +AY+  G A   +G+Y +A     +A++L+    EA+ +L   Y  L + +
Sbjct: 174 ALQLHPHFAAAYSNRGNAYHLLGDYHQAIADQNQALKLEPKLAEAYHNLGNAYYSLGDYQ 233

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A+    + L I   F+ AY+ RGL+   + ++ +A+ D S  + ++P +++    R   
Sbjct: 234 SAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERGLV 293

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGD 688
           + ++G Y+ AI DYD A  L+ +     V    A  ++ +A Y  +  +S          
Sbjct: 294 HSSLGNYQGAIADYDQA--LQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLL-----R 346

Query: 689 IDPLFKEYWCKR 700
           ++PL  E +C R
Sbjct: 347 LNPLLAEGYCDR 358



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 150/322 (46%), Gaps = 25/322 (7%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A  + G Y SAI+ +++ L+  P +  A   RG   A  +E + A++DF+EA++ NP 
Sbjct: 223 GNAYYSLGDYQSAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALADFSEAVKLNPD 282

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +A+  RG   ++LG    AI D  +AL+  P    +   R     +  D+  A+ED +
Sbjct: 283 DVQAYCERGLVHSSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDST 342

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+      Y    +A  S+G+Y+ A + + +A+  D N   A+      Y+ + + 
Sbjct: 343 RLLRLNPLLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDY 402

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+    Q + I+  FS AY  RG     LG  + AI D +  L I+P   E  Y RAS
Sbjct: 403 QRAIADNTQAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYYNRAS 462

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG 687
             +A+ +YR AI DY  AL L   S         AFY        + + N+ +   D  G
Sbjct: 463 IRYALKDYRGAIADYTQALRLNPHSA--------AFY--------SDRGNAHYALEDYQG 506

Query: 688 DI---------DPLFKEYWCKR 700
            I         +P F + W  R
Sbjct: 507 AIADYNQAIALEPSFADDWFNR 528



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 135/264 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+++ ++G    AI+ F+Q L+  P +  A   RG A     +   AI+D  +A++  
Sbjct: 153 NQGVSRCDQGDNQGAIADFNQALQLHPHFAAAYSNRGNAYHLLGDYHQAIADQNQALKLE 212

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA+   G A  +LG+   AI + ++ALE +P  A   + RG+V    K+++ A+ D
Sbjct: 213 PKLAEAYHNLGNAYYSLGDYQSAIANYNRALEIKPEFAGAYYNRGLVFAHIKEYDQALAD 272

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  VKL+ ++  AY   GL  SS+G Y+ A   + +A+Q +      +G      + LA
Sbjct: 273 FSEAVKLNPDDVQAYCERGLVHSSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLA 332

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+E   ++L ++   ++ Y  R +    LG ++ AIKD    L  D +     Y R
Sbjct: 333 DYQGAIEDSTRLLRLNPLLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGR 392

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
              Y A+ +Y+ AI D   A+ +E
Sbjct: 393 GIVYEAMQDYQRAIADNTQAIKIE 416



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 134/264 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   +  +Y  A++ F + +K +P   +A   RG   +     + AI+D+ +A+Q N
Sbjct: 255 NRGLVFAHIKEYDQALADFSEAVKLNPDDVQAYCERGLVHSSLGNYQGAIADYDQALQKN 314

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+ G  +  R  A+  L +   AI+D ++ L   P  A+   +R +      D+  A++D
Sbjct: 315 PTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNPLLAEGYCDRAVARRSLGDYQGAIKD 374

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +  D    +AY   G+   ++ +Y++A   + +AI+++ NF  A+ +     + L 
Sbjct: 375 YDRALLFDANLAAAYYGRGIVYEAMQDYQRAIADNTQAIKIEPNFSPAYCNRGNARRLLG 434

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q L I+  F +AY+ R  + + L  ++ AI D +  L ++P +      R
Sbjct: 435 DEQGAIADYNQALQINPDFGEAYYNRASIRYALKDYRGAIADYTQALRLNPHSAAFYSDR 494

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
            + ++A+ +Y+ AI DY+ A+ LE
Sbjct: 495 GNAHYALEDYQGAIADYNQAIALE 518



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 134/296 (45%), Gaps = 34/296 (11%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+   + G Y  AI+ +DQ L+++P        R  A+    + + AI D T  ++ NP
Sbjct: 290 RGLVHSSLGNYQGAIADYDQALQKNPTLGLVYGFRANAKRRLADYQGAIEDSTRLLRLNP 349

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              E +  R  AR +LG+   AI+D  +AL F+ N A   + RGIV    +D+  A+ D 
Sbjct: 350 LLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQDYQRAIADN 409

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------------ 554
           +  +K++     AY   G A   +G+ + A   + +A+Q++ +F EA+            
Sbjct: 410 TQAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYYNRASIRYALKD 469

Query: 555 ---------------GHLTQFYQDLANSEKALECLQ-------QVLYIDKRFSKAYHLRG 592
                           H   FY D  N+  ALE  Q       Q + ++  F+  +  RG
Sbjct: 470 YRGAIADYTQALRLNPHSAAFYSDRGNAHYALEDYQGAIADYNQAIALEPSFADDWFNRG 529

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
                LG  + A+ DL   L + P   E   +RA  Y  +G+ ++AI D+ A+ DL
Sbjct: 530 RSRSLLGDLQGALVDLKQALELQPHWAEAYIVRADVYRNLGDTQKAIADFQASADL 585



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 123/240 (51%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           TR+ +   +  +    R +A+ + G Y  AI  +D+ L  D     A  GRG      ++
Sbjct: 342 TRLLRLNPLLAEGYCDRAVARRSLGDYQGAIKDYDRALLFDANLAAAYYGRGIVYEAMQD 401

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+D T+AI+  P+   A+  RG AR  LG+   AI D ++AL+  P+  +  + R 
Sbjct: 402 YQRAIADNTQAIKIEPNFSPAYCNRGNARRLLGDEQGAIADYNQALQINPDFGEAYYNRA 461

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            + +  KD+  A+ D +  ++L+  + + Y+  G A  ++ +Y+ A   + +AI L+ +F
Sbjct: 462 SIRYALKDYRGAIADYTQALRLNPHSAAFYSDRGNAHYALEDYQGAIADYNQAIALEPSF 521

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            + W +  +    L + + AL  L+Q L +   +++AY +R  +   LG  +KAI D  +
Sbjct: 522 ADDWFNRGRSRSLLGDLQGALVDLKQALELQPHWAEAYIVRADVYRNLGDTQKAIADFQA 581



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 130/267 (48%), Gaps = 23/267 (8%)

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA-RAALGESVEAIQD 471
           M  E L  +G  + FQ E E AI+ +T+AI+ +P   EA+  R     + + +   AI D
Sbjct: 1   MKAEDLFNQGLNKNFQGEFEEAIAYYTQAIELDPDYAEAYHNRAIILSSGIKDYHGAIAD 60

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            ++AL+  PN A+    R    +  +D+  A+ D +  ++++     +Y   G A  ++G
Sbjct: 61  YNRALQINPNFAEAYSNRANARYFLEDYQGAIADYNRALQINPHLSESYHGRGKASKALG 120

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ-DLANS--------------EKALECLQQ 576
           +Y+ A   + +A+Q++         LT +   D+AN+              + A+    Q
Sbjct: 121 DYETAIADYRQALQINP-------QLTSYINIDIANAYHNQGVSRCDQGDNQGAIADFNQ 173

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +   F+ AY  RG   H LG + +AI D +  L ++P   E  +   + Y+++G+Y+
Sbjct: 174 ALQLHPHFAAAYSNRGNAYHLLGDYHQAIADQNQALKLEPKLAEAYHNLGNAYYSLGDYQ 233

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAF 663
            AI +Y+ AL+++ +    +  + L F
Sbjct: 234 SAIANYNRALEIKPEFAGAYYNRGLVF 260



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S  F   RG A      Y  AI+ ++Q +  +P + +    RG +R+   +L+ A+ D  
Sbjct: 487 SAAFYSDRGNAHYALEDYQGAIADYNQAIALEPSFADDWFNRGRSRSLLGDLQGALVDLK 546

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           +A++  P   EA+  R      LG++ +AI D          SAD+ +++G
Sbjct: 547 QALELQPHWAEAYIVRADVYRNLGDTQKAIADFQA-------SADLYYKQG 590


>gi|301111123|ref|XP_002904641.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
 gi|262095958|gb|EEY54010.1| UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase,
           putative [Phytophthora infestans T30-4]
          Length = 579

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 149/294 (50%), Gaps = 5/294 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG     EGK+ +A   + + ++ +P + +A   RG      R  +AA+ D+T+A++ +
Sbjct: 228 ARGFQYRQEGKFQAAADEYSRAIQLNPQHFKAFFNRGFVYDKIRRFDAAVEDYTQALKMD 287

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A   RG +    G+   A+ D ++A+E  P +AD  H RG  + K  +F  A+ D
Sbjct: 288 PHNAFALYNRGISLDRSGDYQGALTDFTRAIELLPTNADFYHNRGFCHRKQGNFELAIAD 347

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  ++ +  +  +      +   +G Y++A + +  A++++     A+ +    Y  + 
Sbjct: 348 YSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQDYTAALRVEPENANAYHNRGSTYDKMR 407

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           ++ +A+    + + +  R   +Y+ RGL    LG+H++A++D +  L +DP +    + R
Sbjct: 408 DTTRAIADFDRAIALQPRSVSSYNSRGLCYDQLGRHQEALQDFALALTLDPRSAVFYHNR 467

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSM-----EKFVLQCLAFYQKEIALYTAS 674
             C   +G + EA++DY +AL LE  ++       + L+ L  +Q+ +A YT +
Sbjct: 468 GYCLRNMGRFEEAVQDYSSALALEPRNVAAYNNRGYALRKLRRFQEAVADYTTA 521



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 126/265 (47%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG       ++ +A+  + Q LK DP    AL  RG +     + + A++DFT AI+ 
Sbjct: 261 FNRGFVYDKIRRFDAAVEDYTQALKMDPHNAFALYNRGISLDRSGDYQGALTDFTRAIEL 320

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P+  + +  RG      G    AI D S+A+EF PN    L+ R     K   +  A +
Sbjct: 321 LPTNADFYHNRGFCHRKQGNFELAIADYSRAIEFNPNHFKSLYNRAYSYDKLGRYQEAAQ 380

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +A ++++ EN +AY   G     + +  +A     +AI L    + ++      Y  L
Sbjct: 381 DYTAALRVEPENANAYHNRGSTYDKMRDTTRAIADFDRAIALQPRSVSSYNSRGLCYDQL 440

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++AL+     L +D R +  YH RG  L  +G+ ++A++D SS L ++P N+     
Sbjct: 441 GRHQEALQDFALALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALALEPRNVAAYNN 500

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           R      +  ++EA+ DY  AL ++
Sbjct: 501 RGYALRKLRRFQEAVADYTTALTID 525



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 124/264 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI+    G Y  A++ F + ++  P   +    RG     Q   E AI+D++ AI+ N
Sbjct: 296 NRGISLDRSGDYQGALTDFTRAIELLPTNADFYHNRGFCHRKQGNFELAIADYSRAIEFN 355

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  ++   R  +   LG   EA QD + AL  EP +A+  H RG    K +D   A+ D
Sbjct: 356 PNHFKSLYNRAYSYDKLGRYQEAAQDYTAALRVEPENANAYHNRGSTYDKMRDTTRAIAD 415

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L   + S+Y   GL    +G +++A +    A+ LD      + +     +++ 
Sbjct: 416 FDRAIALQPRSVSSYNSRGLCYDQLGRHQEALQDFALALTLDPRSAVFYHNRGYCLRNMG 475

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A++     L ++ R   AY+ RG  L  L + ++A+ D ++ L IDP N   L  R
Sbjct: 476 RFEEAVQDYSSALALEPRNVAAYNNRGYALRKLRRFQEAVADYTTALTIDPQNTRTLSNR 535

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
           A     +    EAI DY   L L+
Sbjct: 536 AYSLAKMQHIEEAIADYSQILTLD 559



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 91/200 (45%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A   +   L+ +P    A   RG+     R+   AI+DF  AI   P +  ++  
Sbjct: 373 GRYQEAAQDYTAALRVEPENANAYHNRGSTYDKMRDTTRAIADFDRAIALQPRSVSSYNS 432

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG     LG   EA+QD + AL  +P SA   H RG        F  AV+D S+ + L+ 
Sbjct: 433 RGLCYDQLGRHQEALQDFALALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALALEP 492

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            N +AY   G AL  +  +++A   +  A+ +D        +       + + E+A+   
Sbjct: 493 RNVAAYNNRGYALRKLRRFQEAVADYTTALTIDPQNTRTLSNRAYSLAKMQHIEEAIADY 552

Query: 575 QQVLYIDKRFSKAYHLRGLL 594
            Q+L +D + S + H R +L
Sbjct: 553 SQILTLDPQNSYSRHNRAIL 572



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 128/328 (39%), Gaps = 56/328 (17%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG A   +  Y   I    +++  D     AL  RG A +   +++ AI DF+  +Q 
Sbjct: 69  LARGQALFKQANYDQTIQDLTEVVALDSSNAAALYTRGLAYSRLGKVQLAIRDFSRTLQI 128

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQD--------------------------------- 471
           NP    A   R     + G+ V AI D                                 
Sbjct: 129 NPEHVNAAYARASCYNSQGDFVRAIDDYNCALLKDKKLKLQQKQQQELHRSANLTRQQLQ 188

Query: 472 -------------LSKALEFEP----------NSADILHERGIVNFKFKDFNAAVEDLSA 508
                        LS+ ++  P          + A++ H RG    +   F AA ++ S 
Sbjct: 189 RQKQDESVSNTLVLSQRMKKAPISGTNNFSALDQAEVHHARGFQYRQEGKFQAAADEYSR 248

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++L+ ++  A+   G     I  +  A E + +A+++D +   A  +         + +
Sbjct: 249 AIQLNPQHFKAFFNRGFVYDKIRRFDAAVEDYTQALKMDPHNAFALYNRGISLDRSGDYQ 308

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            AL    + + +    +  YH RG      G  + AI D S  +  +P++ + LY RA  
Sbjct: 309 GALTDFTRAIELLPTNADFYHNRGFCHRKQGNFELAIADYSRAIEFNPNHFKSLYNRAYS 368

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKF 656
           Y  +G Y+EA +DY AAL +E ++   +
Sbjct: 369 YDKLGRYQEAAQDYTAALRVEPENANAY 396



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 67/328 (20%), Positives = 124/328 (37%), Gaps = 61/328 (18%)

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           L  +P   + L+ RG A   Q   +  I D TE +  + S   A   RG A + LG+   
Sbjct: 58  LVREPKDVKVLLARGQALFKQANYDQTIQDLTEVVALDSSNAAALYTRGLAYSRLGKVQL 117

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC------------------ 509
           AI+D S+ L+  P   +  + R        DF  A++D +                    
Sbjct: 118 AIRDFSRTLQINPEHVNAAYARASCYNSQGDFVRAIDDYNCALLKDKKLKLQQKQQQELH 177

Query: 510 ---------VKLDKENKSAYTYLGLA----------LSSIGEYKKAEEAHLKAIQ----- 545
                    ++  K+++S    L L+           ++     +AE  H +  Q     
Sbjct: 178 RSANLTRQQLQRQKQDESVSNTLVLSQRMKKAPISGTNNFSALDQAEVHHARGFQYRQEG 237

Query: 546 --------------LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
                         L+    +A+ +    Y  +   + A+E   Q L +D   + A + R
Sbjct: 238 KFQAAADEYSRAIQLNPQHFKAFFNRGFVYDKIRRFDAAVEDYTQALKMDPHNAFALYNR 297

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G+ L   G ++ A+ D +  + + P+N +  + R  C+   G +  AI DY  A++   +
Sbjct: 298 GISLDRSGDYQGALTDFTRAIELLPTNADFYHNRGFCHRKQGNFELAIADYSRAIEFNPN 357

Query: 652 SMEKFVLQCLAF-----YQKEIALYTAS 674
             +    +  ++     YQ+    YTA+
Sbjct: 358 HFKSLYNRAYSYDKLGRYQEAAQDYTAA 385



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 14/196 (7%)

Query: 315 SASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRIS 374
           +A+L     N+ +Y     + +K  D+T + +    +   L+  S  +  ++  C  ++ 
Sbjct: 383 TAALRVEPENANAYHNRGSTYDKMRDTTRAIADFD-RAIALQPRSVSSYNSRGLCYDQLG 441

Query: 375 KSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           + +    DF L+             RG    N G++  A+  +   L  +P    A   R
Sbjct: 442 RHQEALQDFALALTLDPRSAVFYHNRGYCLRNMGRFEEAVQDYSSALALEPRNVAAYNNR 501

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G A    R  + A++D+T A+  +P        R  + A +    EAI D S+ L  +P 
Sbjct: 502 GYALRKLRRFQEAVADYTTALTIDPQNTRTLSNRAYSLAKMQHIEEAIADYSQILTLDPQ 561

Query: 482 SADILHERGIVNFKFK 497
           ++   H R I+  K K
Sbjct: 562 NSYSRHNRAILTAKMK 577



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 49  LRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +R+ ++AI   D  +A Q   +    +R  CY QL  H+  ++D   AL LDP     Y 
Sbjct: 406 MRDTTRAIADFDRAIALQPRSVSSYNSRGLCYDQLGRHQEALQDFALALTLDPRSAVFYH 465

Query: 108 LKGCAFSALGRKEEALSVW 126
            +G     +GR EEA+  +
Sbjct: 466 NRGYCLRNMGRFEEAVQDY 484


>gi|300868839|ref|ZP_07113446.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
 gi|300333190|emb|CBN58638.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
          Length = 334

 Score =  125 bits (313), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 89/316 (28%), Positives = 147/316 (46%), Gaps = 40/316 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+ +  +G Y  AI+ F+Q+L  +P   +    RG    + ++ + AI+D ++A+  +P
Sbjct: 9   RGLNKAKKGYYEDAIADFNQVLAINPSDAKTYNNRGLVYYYLKDYQKAITDLSQALDISP 68

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EA+  RG A   LGE+ +AI+DL++ALE  P S  I + RG+V     +++AA+ D 
Sbjct: 69  DLFEAYLNRGNAWRHLGENQKAIEDLNRALESNPQSDAIYNNRGLVLANLGEYDAAIHDY 128

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + ++  N   Y   G A   +G+                                  
Sbjct: 129 DRAIAINPSNYKTYYNRGRAYYLLGD---------------------------------- 154

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            +KA++   Q L ++  + K Y  RGL  H LG + KAI D +  L +DP+N+   Y R 
Sbjct: 155 KQKAIDDFNQTLQLNPTYIKGYINRGLSYHHLGDNLKAIDDYNEALKLDPTNVYAFYNRG 214

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA------LYTASKINSEF 680
              + + E + AI+D+D AL L+   ++ ++ + LA Y+   A       Y    INSE 
Sbjct: 215 CVRYKLLEMKLAIEDFDKALQLDPTYVKAYLNRGLARYKLGDAPGANKDFYHVMCINSEA 274

Query: 681 CWFDIDGDIDPLFKEY 696
            +F       P  K Y
Sbjct: 275 YFFYQAQRCTPHVKAY 290



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 64/223 (28%), Positives = 102/223 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+       Y  AI+   Q L   P   EA + RG A     E + AI D   A++SN
Sbjct: 42  NRGLVYYYLKDYQKAITDLSQALDISPDLFEAYLNRGNAWRHLGENQKAIEDLNRALESN 101

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +   +  RG   A LGE   AI D  +A+   P++    + RG   +   D   A++D
Sbjct: 102 PQSDAIYNNRGLVLANLGEYDAAIHDYDRAIAINPSNYKTYYNRGRAYYLLGDKQKAIDD 161

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+      Y   GL+   +G+  KA + + +A++LD   + A+ +       L 
Sbjct: 162 FNQTLQLNPTYIKGYINRGLSYHHLGDNLKAIDDYNEALKLDPTNVYAFYNRGCVRYKLL 221

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             + A+E   + L +D  + KAY  RGL  + LG    A KD 
Sbjct: 222 EMKLAIEDFDKALQLDPTYVKAYLNRGLARYKLGDAPGANKDF 264



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 58/188 (30%), Positives = 91/188 (48%), Gaps = 3/188 (1%)

Query: 370 VTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           +T +S++  IS D     L+RG A  + G+   AI   ++ L+ +P        RG   A
Sbjct: 57  ITDLSQALDISPDLFEAYLNRGNAWRHLGENQKAIEDLNRALESNPQSDAIYNNRGLVLA 116

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
              E +AAI D+  AI  NPS  + +  RG+A   LG+  +AI D ++ L+  P      
Sbjct: 117 NLGEYDAAIHDYDRAIAINPSNYKTYYNRGRAYYLLGDKQKAIDDFNQTLQLNPTYIKGY 176

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
             RG+      D   A++D +  +KLD  N  A+   G     + E K A E   KA+QL
Sbjct: 177 INRGLSYHHLGDNLKAIDDYNEALKLDPTNVYAFYNRGCVRYKLLEMKLAIEDFDKALQL 236

Query: 547 DRNFLEAW 554
           D  +++A+
Sbjct: 237 DPTYVKAY 244



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 62/130 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G    AI  F+Q L+ +P Y +  I RG +     +   AI D+ EA++ +
Sbjct: 144 NRGRAYYLLGDKQKAIDDFNQTLQLNPTYIKGYINRGLSYHHLGDNLKAIDDYNEALKLD 203

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG  R  L E   AI+D  KAL+ +P        RG+  +K  D   A +D
Sbjct: 204 PTNVYAFYNRGCVRYKLLEMKLAIEDFDKALQLDPTYVKAYLNRGLARYKLGDAPGANKD 263

Query: 506 LSACVKLDKE 515
               + ++ E
Sbjct: 264 FYHVMCINSE 273



 Score = 51.2 bits (121), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/88 (34%), Positives = 49/88 (55%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG++  + G    AI  +++ LK DP    A   RG  R    E++ AI DF +A+Q 
Sbjct: 177 INRGLSYHHLGDNLKAIDDYNEALKLDPTNVYAFYNRGCVRYKLLEMKLAIEDFDKALQL 236

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDL 472
           +P+  +A+  RG AR  LG++  A +D 
Sbjct: 237 DPTYVKAYLNRGLARYKLGDAPGANKDF 264



 Score = 40.8 bits (94), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 38/72 (52%)

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           K  + RGL     G ++ AI D +  L I+PS+ +    R   Y+ + +Y++AI D   A
Sbjct: 4   KQLYKRGLNKAKKGYYEDAIADFNQVLAINPSDAKTYNNRGLVYYYLKDYQKAITDLSQA 63

Query: 646 LDLELDSMEKFV 657
           LD+  D  E ++
Sbjct: 64  LDISPDLFEAYL 75


>gi|434405402|ref|YP_007148287.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
 gi|428259657|gb|AFZ25607.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
          Length = 662

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N G++  AI+ FD+ L+  P + EA   RG         E AI+ + +AI+  
Sbjct: 269 NRGVALGNLGRHEEAIASFDKALEIKPDFHEAWNNRGAVLGNLGRNEEAITSYDKAIEIK 328

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW   G A   LG+  +AI    KALE +P+     + RG+   K   +  A+  
Sbjct: 329 PDFHEAWYNLGNALVQLGQDEKAIASYDKALEIKPDFHQAWNNRGVTLGKLGQYEEAIAS 388

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +   A+   GLAL  +G Y+ A  +  + I++  ++ EAW        +L 
Sbjct: 389 YDKALEIKPDYYEAWYNRGLALGELGRYQDAIASFKEVIRIKPDYCEAWFKRGVMLGNLE 448

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +E A+    +V+ I   + +A++ RGL L  LG ++ AI      L I P + E  Y R
Sbjct: 449 RNENAIASFDEVIKIKPDYHEAWYNRGLALDNLGMYRDAIASYEQVLKIKPDDHEAWYNR 508

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                 IG Y + I  Y   L ++ +  E       A+Y   IAL    K      +FD 
Sbjct: 509 GLALGNIGRYEDEIASYHELLKIKPNDYE-------AWYNWGIALVNLGKNEEAIAYFDK 561

Query: 686 DGDIDPLFKEYWCKR 700
             ++ P   + W  R
Sbjct: 562 VVNLKPDDYQTWYNR 576



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 134/283 (47%), Gaps = 5/283 (1%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           E +Y  AI+  D+ ++  P   +A   RG A       E AI+ F +A++  P   EAW 
Sbjct: 243 EERYEEAIASCDKAIELKPDMHKAWSNRGVALGNLGRHEEAIASFDKALEIKPDFHEAWN 302

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG     LG + EAI    KA+E +P+  +  +  G    +      A+      +++ 
Sbjct: 303 NRGAVLGNLGRNEEAITSYDKAIEIKPDFHEAWYNLGNALVQLGQDEKAIASYDKALEIK 362

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +   A+   G+ L  +G+Y++A  ++ KA+++  ++ EAW +      +L   + A+  
Sbjct: 363 PDFHQAWNNRGVTLGKLGQYEEAIASYDKALEIKPDYYEAWYNRGLALGELGRYQDAIAS 422

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
            ++V+ I   + +A+  RG++L  L +++ AI      + I P   E  Y R      +G
Sbjct: 423 FKEVIRIKPDYCEAWFKRGVMLGNLERNENAIASFDEVIKIKPDYHEAWYNRGLALDNLG 482

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
            YR+AI  Y+  L ++ D  E +  + LA      Y+ EIA Y
Sbjct: 483 MYRDAIASYEQVLKIKPDDHEAWYNRGLALGNIGRYEDEIASY 525



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 135/288 (46%), Gaps = 4/288 (1%)

Query: 364 RNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           RN++  +T   K+  I  DF     + G A V  G+   AI+ +D+ L+  P + +A   
Sbjct: 313 RNEE-AITSYDKAIEIKPDFHEAWYNLGNALVQLGQDEKAIASYDKALEIKPDFHQAWNN 371

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG       + E AI+ + +A++  P   EAW  RG A   LG   +AI    + +  +P
Sbjct: 372 RGVTLGKLGQYEEAIASYDKALEIKPDYYEAWYNRGLALGELGRYQDAIASFKEVIRIKP 431

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           +  +   +RG++    +    A+      +K+  +   A+   GLAL ++G Y+ A  ++
Sbjct: 432 DYCEAWFKRGVMLGNLERNENAIASFDEVIKIKPDYHEAWYNRGLALDNLGMYRDAIASY 491

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            + +++  +  EAW +      ++   E  +    ++L I     +A++  G+ L  LG+
Sbjct: 492 EQVLKIKPDDHEAWYNRGLALGNIGRYEDEIASYHELLKIKPNDYEAWYNWGIALVNLGK 551

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           +++AI      + + P + +  Y R      +G Y  AI  YD A+++
Sbjct: 552 NEEAIAYFDKVVNLKPDDYQTWYNRGLALGKLGRYENAIASYDKAVEI 599



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 5/284 (1%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    K+  I  DF  +   RG+     G+Y  AI+ +D+ L+  P Y EA   RG A 
Sbjct: 351 AIASYDKALEIKPDFHQAWNNRGVTLGKLGQYEEAIASYDKALEIKPDYYEAWYNRGLAL 410

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                 + AI+ F E I+  P   EAW +RG     L  +  AI    + ++ +P+  + 
Sbjct: 411 GELGRYQDAIASFKEVIRIKPDYCEAWFKRGVMLGNLERNENAIASFDEVIKIKPDYHEA 470

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG+       +  A+      +K+  ++  A+   GLAL +IG Y+    ++ + ++
Sbjct: 471 WYNRGLALDNLGMYRDAIASYEQVLKIKPDDHEAWYNRGLALGNIGRYEDEIASYHELLK 530

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +  N  EAW +      +L  +E+A+    +V+ +     + ++ RGL L  LG+++ AI
Sbjct: 531 IKPNDYEAWYNWGIALVNLGKNEEAIAYFDKVVNLKPDDYQTWYNRGLALGKLGRYENAI 590

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYRE-AIKDYDAALDL 648
                 + I P   +  Y +A CY A+ +  E A+++   A+ L
Sbjct: 591 ASYDKAVEIKPELQQAWYNKA-CYCALVQNLEPALENLQQAIKL 633



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 16/127 (12%)

Query: 83  ELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE--HALHQS--- 137
           E ++  I  CDKA++L P + +A+  +G A   LGR EEA++ ++K  E     H++   
Sbjct: 244 ERYEEAIASCDKAIELKPDMHKAWSNRGVALGNLGRHEEAIASFDKALEIKPDFHEAWNN 303

Query: 138 --ADLKQFLELEELLTAAKQDRSVTCE-------YDVSNSMSSLTVSESGLNANDKMSET 188
             A L      EE +T+   D+++  +       Y++ N++  L   E  + + DK  E 
Sbjct: 304 RGAVLGNLGRNEEAITS--YDKAIEIKPDFHEAWYNLGNALVQLGQDEKAIASYDKALEI 361

Query: 189 SENHNKS 195
             + +++
Sbjct: 362 KPDFHQA 368



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 5/92 (5%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
           NR      L  H+  I   DKAL++ P   +A+  +G     LGR EEA++     Y+ A
Sbjct: 269 NRGVALGNLGRHEEAIASFDKALEIKPDFHEAWNNRGAVLGNLGRNEEAIT----SYDKA 324

Query: 134 LHQSADLKQ-FLELEELLTAAKQDRSVTCEYD 164
           +    D  + +  L   L    QD      YD
Sbjct: 325 IEIKPDFHEAWYNLGNALVQLGQDEKAIASYD 356


>gi|75910689|ref|YP_324985.1| hypothetical protein Ava_4492 [Anabaena variabilis ATCC 29413]
 gi|75704414|gb|ABA24090.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 605

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 9/271 (3%)

Query: 387 RGIAQVNEGK-YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           RGI    E K Y  AI+ F+  ++ +P Y +A   RG AR    +  AAI+D+ +A+Q N
Sbjct: 42  RGITFSRELKDYQGAIAFFNLAVEINPNYAQAYYHRGNARYCLADFTAAIADYDQALQIN 101

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--------NSADILHERGIVNFKFK 497
           P+  E +  RG A  A G+  +AI +    +EF+P        + A+  + RG+ N    
Sbjct: 102 PTFAEYYYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLHNSDHG 161

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           ++  A+ DL   ++      +AY+  G     +GEY++A   H +A+QLD N  EA+ + 
Sbjct: 162 NYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNR 221

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              Y  L   +KA+    + L I+     AY+ RGL+   L ++++A  D +  L  +  
Sbjct: 222 GNAYYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLNEYQQAFADFNQVLSFNSK 281

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + +  Y R   Y A  +Y+ A+ DY+ AL L
Sbjct: 282 DAQAYYQRGLIYEAWQDYQSALADYNQALQL 312



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 125/265 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+   + G Y  AI    Q L+  P +  A   RG       E   AI+D   A+Q +P
Sbjct: 153 RGLHNSDHGNYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDP 212

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA++ RG A  ALG   +AI D ++ LE  P+     + RG+++F   ++  A  D 
Sbjct: 213 NLAEAYQNRGNAYYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLNEYQQAFADF 272

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +  + ++  AY   GL   +  +Y+ A   + +A+QL+      +G     ++ L +
Sbjct: 273 NQVLSFNSKDAQAYYQRGLIYEAWQDYQSALADYNQALQLNPELAVVYGVRANIHRHLGD 332

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              AL    ++L +   F+  Y  RG     LG ++ AI D +  L I+P+  E  Y RA
Sbjct: 333 YPSALADGNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITDYNQALQINPNIAEAYYGRA 392

Query: 627 SCYHAIGEYREAIKDYDAALDLELD 651
             + A+ +   AI DY  ++ +  D
Sbjct: 393 IAHEALQDLIGAIADYTHSIRISPD 417



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 116/222 (52%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG ++   G Y  AI+ ++Q L+ +P   EA  GR  A    ++L  AI+D+T +I+ +P
Sbjct: 357 RGTSRRCLGDYRGAITDYNQALQINPNIAEAYYGRAIAHEALQDLIGAIADYTHSIRISP 416

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG AR  LG++  A+ D ++AL      ++  + RG +++  +++ +A+ D 
Sbjct: 417 DFAPAYCNRGNARRQLGDTKGALADYNQALTINTQLSEAYYNRGSLHYDQQNYRSAIADY 476

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++L  E+   Y+    A  ++ +Y+ A   + ++I ++  + E W +  + Y  L  
Sbjct: 477 TQALELQPESARYYSDRAHARYALQDYQGAVADYTQSIAINPGYAEDWYNRGRSYLLLGY 536

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            E+AL  L Q L     ++ AY LR  +L   G ++ AI D 
Sbjct: 537 LEEALADLNQALKFQPHWASAYLLRADILRNRGDYQAAITDF 578



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 141/320 (44%), Gaps = 17/320 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G Y  AI+ +++ L+ +P    A   RG    +  E + A +DF + +  N
Sbjct: 220 NRGNAYYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLNEYQQAFADFNQVLSFN 279

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               +A+ +RG    A  +   A+ D ++AL+  P  A +   R  ++    D+ +A+ D
Sbjct: 280 SKDAQAYYQRGLIYEAWQDYQSALADYNQALQLNPELAVVYGVRANIHRHLGDYPSALAD 339

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L     + Y   G +   +G+Y+ A   + +A+Q++ N  EA+      ++ L 
Sbjct: 340 GNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITDYNQALQINPNIAEAYYGRAIAHEALQ 399

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +   A+      + I   F+ AY  RG     LG  K A+ D +  L I+    E  Y R
Sbjct: 400 DLIGAIADYTHSIRISPDFAPAYCNRGNARRQLGDTKGALADYNQALTINTQLSEAYYNR 459

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTASKINSEF 680
            S ++    YR AI DY  AL+L+ +S   +         L  YQ  +A YT S      
Sbjct: 460 GSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQDYQGAVADYTQSIA---- 515

Query: 681 CWFDIDGDIDPLFKEYWCKR 700
                   I+P + E W  R
Sbjct: 516 --------INPGYAEDWYNR 527



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 6/267 (2%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQREL---EAAISDFTEAIQSNPSAGEAWK 453
           Y SA++ ++Q L+   + PE  +  G      R L    +A++D    +Q  P+    + 
Sbjct: 299 YQSALADYNQALQ---LNPELAVVYGVRANIHRHLGDYPSALADGNRLLQLQPNFAAGYC 355

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG +R  LG+   AI D ++AL+  PN A+  + R I +   +D   A+ D +  +++ 
Sbjct: 356 DRGTSRRCLGDYRGAITDYNQALQINPNIAEAYYGRAIAHEALQDLIGAIADYTHSIRIS 415

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +   AY   G A   +G+ K A   + +A+ ++    EA+ +    + D  N   A+  
Sbjct: 416 PDFAPAYCNRGNARRQLGDTKGALADYNQALTINTQLSEAYYNRGSLHYDQQNYRSAIAD 475

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             Q L +    ++ Y  R    + L  ++ A+ D +  + I+P   E  Y R   Y  +G
Sbjct: 476 YTQALELQPESARYYSDRAHARYALQDYQGAVADYTQSIAINPGYAEDWYNRGRSYLLLG 535

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQC 660
              EA+ D + AL  +      ++L+ 
Sbjct: 536 YLEEALADLNQALKFQPHWASAYLLRA 562



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 9/209 (4%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AI   + A+E  PN A   + RG   +   DF AA+ D    ++++      Y   G A 
Sbjct: 56  AIAFFNLAVEINPNYAQAYYHRGNARYCLADFTAAIADYDQALQINPTFAEYYYCRGNAY 115

Query: 528 SSIGEYKKAEEAHLKAIQLD--------RNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
            + G+Y +A   ++  I+ D         +   A+ +      D  N ++A+  LQQ L 
Sbjct: 116 LAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLHNSDHGNYQEAIIDLQQALQ 175

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
               F+ AY +RG + + LG++++AI D    + +DP+  E    R + Y+A+G Y++AI
Sbjct: 176 WHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAYYALGAYQKAI 235

Query: 640 KDYDAALDLELDSMEKFVLQCL-AFYQKE 667
            DY+  L++    +  +  + L +FY  E
Sbjct: 236 ADYNRTLEINPHQVGAYYNRGLISFYLNE 264



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 14/261 (5%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y SA++  +++L+  P +      RGT+R    +   AI+D+ +A+Q NP+  EA+  
Sbjct: 331 GDYPSALADGNRLLQLQPNFAAGYCDRGTSRRCLGDYRGAITDYNQALQINPNIAEAYYG 390

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R  A  AL + + AI D + ++   P+ A     RG    +  D   A+ D +  + ++ 
Sbjct: 391 RAIAHEALQDLIGAIADYTHSIRISPDFAPAYCNRGNARRQLGDTKGALADYNQALTINT 450

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   AY   G        Y+ A   + +A++L            ++Y D A++  AL+  
Sbjct: 451 QLSEAYYNRGSLHYDQQNYRSAIADYTQALELQ-------PESARYYSDRAHARYALQDY 503

Query: 575 Q-------QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           Q       Q + I+  +++ ++ RG     LG  ++A+ DL+  L   P       LRA 
Sbjct: 504 QGAVADYTQSIAINPGYAEDWYNRGRSYLLLGYLEEALADLNQALKFQPHWASAYLLRAD 563

Query: 628 CYHAIGEYREAIKDYDAALDL 648
                G+Y+ AI D+  + DL
Sbjct: 564 ILRNRGDYQAAITDFQKSADL 584



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 19/149 (12%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +++++++ +LS     RG    ++  Y SAI+ + Q L+  P        R  AR   ++
Sbjct: 443 NQALTINTQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQD 502

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN-------SA 483
            + A++D+T++I  NP   E W  RG++   LG   EA+ DL++AL+F+P+        A
Sbjct: 503 YQGAVADYTQSIAINPGYAEDWYNRGRSYLLLGYLEEALADLNQALKFQPHWASAYLLRA 562

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKL 512
           DIL  RG       D+ AA+ D      L
Sbjct: 563 DILRNRG-------DYQAAITDFQKSADL 584



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 3/184 (1%)

Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDP 412
           +  ++EA ++    +   + S  IS DF     +RG A+   G    A++ ++Q L  + 
Sbjct: 391 RAIAHEALQDLIGAIADYTHSIRISPDFAPAYCNRGNARRQLGDTKGALADYNQALTINT 450

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
              EA   RG+    Q+   +AI+D+T+A++  P +   +  R  AR AL +   A+ D 
Sbjct: 451 QLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQDYQGAVADY 510

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           ++++   P  A+  + RG           A+ DL+  +K      SAY      L + G+
Sbjct: 511 TQSIAINPGYAEDWYNRGRSYLLLGYLEEALADLNQALKFQPHWASAYLLRADILRNRGD 570

Query: 533 YKKA 536
           Y+ A
Sbjct: 571 YQAA 574



 Score = 43.5 bits (101), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query: 75  RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
           R   Y +L  ++  I D ++A+QLDP L +AY  +G A+ ALG  ++A++ + +  E   
Sbjct: 187 RGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAYYALGAYQKAIADYNRTLEINP 246

Query: 135 HQ 136
           HQ
Sbjct: 247 HQ 248


>gi|158337072|ref|YP_001518247.1| hypothetical protein AM1_3945 [Acaryochloris marina MBIC11017]
 gi|158307313|gb|ABW28930.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 594

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 140/300 (46%), Gaps = 16/300 (5%)

Query: 365 NKKFCVTRISKSKSISVDFR----------------LSRGIAQVNEGKYASAISIFDQIL 408
           N+ +  T +  SKS   D+                 L+RG+A      Y +A+  F+Q+L
Sbjct: 264 NRGYAHTVLGNSKSAIADYTKVIQLNPKNIELTKIYLNRGLAFAAAKNYPAALQDFNQVL 323

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           + D   PEA + RG A A      AAI D+ + I+  P +  A+  RG A + +G++  A
Sbjct: 324 QRDAKNPEAYLNRGRAHAASGNHLAAIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATA 383

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           + D SKAL+ +P  A  L+ RG+V     +   A+ D +A +++D +  +AY   G A  
Sbjct: 384 LADYSKALQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHL 443

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
             G  + A     +AI  +     A+ +    +     +E A+    QVL +D +F+ AY
Sbjct: 444 KAGNTEAAIADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLKLDPKFAAAY 503

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             RG L    G    A+KD S  +  +P N      RA  + A+ +Y EA+ DY  A  +
Sbjct: 504 TNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNNRALIHSALRQYEEALSDYQQAAKI 563



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 9/317 (2%)

Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPE--- 416
           K N K  +    K+  I+ ++ L+   RG A    G   SAI+ + ++++ +P   E   
Sbjct: 238 KGNFKGAIQDYDKAIQINGNYALAYVNRGYAHTVLGNSKSAIADYTKVIQLNPKNIELTK 297

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
             + RG A A  +   AA+ DF + +Q +    EA+  RG+A AA G  + AIQD  + +
Sbjct: 298 IYLNRGLAFAAAKNYPAALQDFNQVLQRDAKNPEAYLNRGRAHAASGNHLAAIQDYGQVI 357

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           +F+P SA     RG+   K  D   A+ D S  ++LD +  +A    GL   + G  + A
Sbjct: 358 KFQPKSALAYFNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQLNQGNSQDA 417

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
                 +IQ+D  +  A+ +    +    N+E A+    Q +  +   + AY+ RG+   
Sbjct: 418 IADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLAYYNRGIAHS 477

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             GQ++ AI D S  L +DP        R + + A G+   A+KDY  A++   ++   +
Sbjct: 478 TAGQNEAAIADYSQVLKLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAY 537

Query: 657 VLQCL---AFYQKEIAL 670
             + L   A  Q E AL
Sbjct: 538 NNRALIHSALRQYEEAL 554



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 125/270 (46%), Gaps = 7/270 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +G+ +  +G +  AI  +D+ ++ +  Y  A + RG A       ++AI+D+T+ IQ 
Sbjct: 229 LRQGVEKYGKGNFKGAIQDYDKAIQINGNYALAYVNRGYAHTVLGNSKSAIADYTKVIQL 288

Query: 445 NPSAGEAWK---RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           NP   E  K    RG A AA      A+QD ++ L+ +  + +    RG  +    +  A
Sbjct: 289 NPKNIELTKIYLNRGLAFAAAKNYPAALQDFNQVLQRDAKNPEAYLNRGRAHAASGNHLA 348

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQ 559
           A++D    +K   ++  AY   G+A S +G+   A   + KA+QLD  +  A  +  L Q
Sbjct: 349 AIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQ 408

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             Q   NS+ A+      + +D +++ AY  RG      G  + AI D +  +  +  + 
Sbjct: 409 LNQ--GNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDT 466

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLE 649
              Y R   +   G+   AI DY   L L+
Sbjct: 467 LAYYNRGIAHSTAGQNEAAIADYSQVLKLD 496



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 12/277 (4%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD---ILH 487
            + AI D+ +AIQ N +   A+  RG A   LG S  AI D +K ++  P + +   I  
Sbjct: 241 FKGAIQDYDKAIQINGNYALAYVNRGYAHTVLGNSKSAIADYTKVIQLNPKNIELTKIYL 300

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG+     K++ AA++D +  ++ D +N  AY   G A ++ G +  A + + + I+  
Sbjct: 301 NRGLAFAAAKNYPAALQDFNQVLQRDAKNPEAYLNRGRAHAASGNHLAAIQDYGQVIKFQ 360

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
                A+ +    Y  + ++  AL    + L +D +++ A + RGL+    G  + AI D
Sbjct: 361 PKSALAYFNRGVAYSKVGDNATALADYSKALQLDPKYAAALYNRGLVQLNQGNSQDAIAD 420

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
            ++ + +D         R + +   G    AI D+  A+    +         LA+Y + 
Sbjct: 421 FTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAED-------TLAYYNRG 473

Query: 668 IALYTASKINSEFCWFDIDGDIDPLFKEYWCKR--LH 702
           IA  TA +  +    +     +DP F   +  R  LH
Sbjct: 474 IAHSTAGQNEAAIADYSQVLKLDPKFAAAYTNRGNLH 510


>gi|428307503|ref|YP_007144328.1| hypothetical protein Cri9333_4011 [Crinalium epipsammum PCC 9333]
 gi|428249038|gb|AFZ14818.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
            epipsammum PCC 9333]
          Length = 1095

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 146/291 (50%), Gaps = 5/291 (1%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG    N  +Y  A++ +++ ++  P   E    RG      +E + A++D+T AI+  
Sbjct: 741  NRGNTYDNLQEYQKALADYNRAIELQPDLAEVYYNRGNTYDNLQEYQKALADYTRAIELQ 800

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    A+  RG    +L E  +A+ D ++A+  +P+ A   + RG+     +++  A+ D
Sbjct: 801  PDLAIAYSNRGNTYKSLQEYQKALADYTRAIALKPDDAKAYYNRGVTYGNLQEYQKALAD 860

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  + L+ +  SAY   GL   ++ EY+KA   + +AI+L  +  +A+      Y +L 
Sbjct: 861  FTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQPDLADAYNSRGVTYYNLQ 920

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +KAL      + +    + AY+ RG     L +++KAI D +  + + P + E  Y R
Sbjct: 921  EYQKALADYTSAIALQPDLADAYNNRGNTYDDLQEYQKAIADYNRAIALQPDDTEAYYNR 980

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
               Y+ + EY++A+ DY+ A+ L+ +  + +  + L +     YQK IA Y
Sbjct: 981  GITYYNLQEYQKALADYNRAIALKPNDADAYSNRGLTYFNLQEYQKAIADY 1031



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 147/291 (50%), Gaps = 5/291 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   +  +Y  A++ +++ +K  P Y +    RG    + +E + A++++  AI   
Sbjct: 673 NRGLTYKSLQEYQKALADYNRAIKLQPDYADGYYNRGVTYFYLQEYQKALAEYNRAIALQ 732

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               +A+  RG     L E  +A+ D ++A+E +P+ A++ + RG      +++  A+ D
Sbjct: 733 LDNAKAYNNRGNTYDNLQEYQKALADYNRAIELQPDLAEVYYNRGNTYDNLQEYQKALAD 792

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L  +   AY+  G    S+ EY+KA   + +AI L  +  +A+ +    Y +L 
Sbjct: 793 YTRAIELQPDLAIAYSNRGNTYKSLQEYQKALADYTRAIALKPDDAKAYYNRGVTYGNLQ 852

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             +KAL    Q + ++  ++ AY+ RGL    L +++KAI D +  + + P   +    R
Sbjct: 853 EYQKALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQPDLADAYNSR 912

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
              Y+ + EY++A+ DY +A+ L+ D  + +         L  YQK IA Y
Sbjct: 913 GVTYYNLQEYQKALADYTSAIALQPDLADAYNNRGNTYDDLQEYQKAIADY 963



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 143/289 (49%), Gaps = 5/289 (1%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG    N  +Y  A++ + + ++  P    A   RG      +E + A++D+T AI   
Sbjct: 775  NRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQKALADYTRAIALK 834

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P   +A+  RG     L E  +A+ D ++A+  EP+ A   + RG+     +++  A+ D
Sbjct: 835  PDDAKAYYNRGVTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIAD 894

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  ++L  +   AY   G+   ++ EY+KA   +  AI L  +  +A+ +    Y DL 
Sbjct: 895  YTRAIELQPDLADAYNSRGVTYYNLQEYQKALADYTSAIALQPDLADAYNNRGNTYDDLQ 954

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +KA+    + + +    ++AY+ RG+  + L +++KA+ D +  + + P++ +    R
Sbjct: 955  EYQKAIADYNRAIALQPDDTEAYYNRGITYYNLQEYQKALADYNRAIALKPNDADAYSNR 1014

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIA 669
               Y  + EY++AI DY+ A+ L+ D  + +  + L +     YQK  A
Sbjct: 1015 GLTYFNLQEYQKAIADYNRAIALQPDDAKAYGNRGLTYSKLQEYQKAFA 1063



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 144/295 (48%), Gaps = 5/295 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG+      +Y  A++ +++ +       +A   RG      +E + A++D+  A
Sbjct: 703 DGYYNRGVTYFYLQEYQKALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNRA 762

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+  P   E +  RG     L E  +A+ D ++A+E +P+ A     RG      +++  
Sbjct: 763 IELQPDLAEVYYNRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQK 822

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  + L  ++  AY   G+   ++ EY+KA     +AI L+ ++  A+ +    Y
Sbjct: 823 ALADYTRAIALKPDDAKAYYNRGVTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLTY 882

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L   +KA+    + + +    + AY+ RG+  + L +++KA+ D +S + + P   + 
Sbjct: 883 DNLQEYQKAIADYTRAIELQPDLADAYNSRGVTYYNLQEYQKALADYTSAIALQPDLADA 942

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
              R + Y  + EY++AI DY+ A+ L+ D  E +  + + +     YQK +A Y
Sbjct: 943 YNNRGNTYDDLQEYQKAIADYNRAIALQPDDTEAYYNRGITYYNLQEYQKALADY 997



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 7/276 (2%)

Query: 380  SVDFRLSRGIAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
            +++ +    IA  N G       +Y  A++ + + +   P   +A   RG      +E +
Sbjct: 796  AIELQPDLAIAYSNRGNTYKSLQEYQKALADYTRAIALKPDDAKAYYNRGVTYGNLQEYQ 855

Query: 433  AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
             A++DFT+AI   P    A+  RG     L E  +AI D ++A+E +P+ AD  + RG+ 
Sbjct: 856  KALADFTQAIALEPDYASAYYNRGLTYDNLQEYQKAIADYTRAIELQPDLADAYNSRGVT 915

Query: 493  NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             +  +++  A+ D ++ + L  +   AY   G     + EY+KA   + +AI L  +  E
Sbjct: 916  YYNLQEYQKALADYTSAIALQPDLADAYNNRGNTYDDLQEYQKAIADYNRAIALQPDDTE 975

Query: 553  AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            A+ +    Y +L   +KAL    + + +    + AY  RGL    L +++KAI D +  +
Sbjct: 976  AYYNRGITYYNLQEYQKALADYNRAIALKPNDADAYSNRGLTYFNLQEYQKAIADYNRAI 1035

Query: 613  GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             + P + +    R   Y  + EY++A  D   A  L
Sbjct: 1036 ALQPDDAKAYGNRGLTYSKLQEYQKAFADLQKAAQL 1071



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 142/315 (45%), Gaps = 38/315 (12%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS-------A 448
           KY+ A+    Q  + DP + +A   RG A    ++   A++ + +AI+ +P         
Sbjct: 582 KYSEAVDALKQATQIDPKFHQAWRLRGAALKSLKKYPEALASYQQAIKLSPQEFVLYVEL 641

Query: 449 GE--------------------------AWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
           G                           A+  RG    +L E  +A+ D ++A++ +P+ 
Sbjct: 642 GNTFSNLERYQDAIVAYSDAIKIKQHPWAYNNRGLTYKSLQEYQKALADYNRAIKLQPDY 701

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           AD  + RG+  F  +++  A+ + +  + L  +N  AY   G    ++ EY+KA   + +
Sbjct: 702 ADGYYNRGVTYFYLQEYQKALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNR 761

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           AI+L  +  E + +    Y +L   +KAL    + + +    + AY  RG     L +++
Sbjct: 762 AIELQPDLAEVYYNRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQ 821

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           KA+ D +  + + P + +  Y R   Y  + EY++A+ D+  A+ LE D    +  + L 
Sbjct: 822 KALADYTRAIALKPDDAKAYYNRGVTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLT 881

Query: 663 F-----YQKEIALYT 672
           +     YQK IA YT
Sbjct: 882 YDNLQEYQKAIADYT 896



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 138/284 (48%), Gaps = 6/284 (2%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI  +   +K    +P A   RG      +E + A++D+  AI+  P   + +  R
Sbjct: 650 RYQDAIVAYSDAIKIK-QHPWAYNNRGLTYKSLQEYQKALADYNRAIKLQPDYADGYYNR 708

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L E  +A+ + ++A+  + ++A   + RG      +++  A+ D +  ++L  +
Sbjct: 709 GVTYFYLQEYQKALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNRAIELQPD 768

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
               Y   G    ++ EY+KA   + +AI+L  +   A+ +    Y+ L   +KAL    
Sbjct: 769 LAEVYYNRGNTYDNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQKALADYT 828

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + +    +KAY+ RG+    L +++KA+ D +  + ++P      Y R   Y  + EY
Sbjct: 829 RAIALKPDDAKAYYNRGVTYGNLQEYQKALADFTQAIALEPDYASAYYNRGLTYDNLQEY 888

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYTAS 674
           ++AI DY  A++L+ D  + +  + + +     YQK +A YT++
Sbjct: 889 QKAIADYTRAIELQPDLADAYNSRGVTYYNLQEYQKALADYTSA 932



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 140/288 (48%), Gaps = 18/288 (6%)

Query: 400 AISIFD---QILKEDP-----MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           A++ FD   QI++  P      Y +A  G+G    +  +   A+    +A Q +P   +A
Sbjct: 544 ALAAFDKAIQIIQHQPNFSKQYYAQAYYGKGLTLYWMEKYSEAVDALKQATQIDPKFHQA 603

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W+ RG A  +L +  EA+    +A++  P    +  E G      + +  A+   S  +K
Sbjct: 604 WRLRGAALKSLKKYPEALASYQQAIKLSPQEFVLYVELGNTFSNLERYQDAIVAYSDAIK 663

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEK 569
           + K++  AY   GL   S+ EY+KA   + +AI+L  ++ + + +  +T FY  L   +K
Sbjct: 664 I-KQHPWAYNNRGLTYKSLQEYQKALADYNRAIKLQPDYADGYYNRGVTYFY--LQEYQK 720

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           AL    + + +    +KAY+ RG     L +++KA+ D +  + + P   E  Y R + Y
Sbjct: 721 ALAEYNRAIALQLDNAKAYNNRGNTYDNLQEYQKALADYNRAIELQPDLAEVYYNRGNTY 780

Query: 630 HAIGEYREAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIALYT 672
             + EY++A+ DY  A++L+ D     S      + L  YQK +A YT
Sbjct: 781 DNLQEYQKALADYTRAIELQPDLAIAYSNRGNTYKSLQEYQKALADYT 828


>gi|158334744|ref|YP_001515916.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris marina MBIC11017]
 gi|158304985|gb|ABW26602.1| serine/threonin protein kinase with TRP repeats [Acaryochloris
           marina MBIC11017]
          Length = 670

 Score =  124 bits (310), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 161/325 (49%), Gaps = 12/325 (3%)

Query: 333 ISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD---FRLSRGI 389
           I+   SS  T   S  +F   + +  +   +RN +  +   S++  +S D     L RG 
Sbjct: 328 IATRMSSSETSGESATAF---IRRGDAKYNRRNYEDAIADYSEAIRLSPDNAQAYLGRGN 384

Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
           A+    +Y  A+  +D+ LK DP Y  A  GRG  +  +++ E AI D+ +AIQS+P   
Sbjct: 385 ARYALEEYPEALIDYDEALKHDPDYVYAFNGRGNVKFARKDFEGAIQDYNQAIQSDPQFA 444

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
            A+  RG  ++AL E   AI+D S+A+   P        RG+      ++  A+ED S  
Sbjct: 445 LAFYNRGNVKSALKEHRAAIEDFSQAIRLNPQYEPAYLLRGVSKAALTNYAGAIEDYSET 504

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           ++L+ +N +A+   G+A   +GE ++A +   +AI+L+     A+ +  +    L ++E 
Sbjct: 505 IRLNPDNDNAFNSRGVARYKLGESRQAIKDFTEAIRLNPKNSFAYCNRGESKLKLKDAEG 564

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD------LSSGLGIDPSNIECLY 623
           A++   + + +D + S AY  RG   H L ++K AI+D      ++SG G   S  +  Y
Sbjct: 565 AIKDCTETIRLDPQSSFAYSARGKAHHALKRYKAAIEDYTQALTINSGWGNSDSPADSYY 624

Query: 624 LRASCYHAIGEYREAIKDYDAALDL 648
            R S    + +   A++D   A DL
Sbjct: 625 NRGSAKSKLNDIAGAVEDLKIAEDL 649



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 88/184 (47%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           SA     RG   +  +++  A+ D S  ++L  +N  AY   G A  ++ EY +A   + 
Sbjct: 341 SATAFIRRGDAKYNRRNYEDAIADYSEAIRLSPDNAQAYLGRGNARYALEEYPEALIDYD 400

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +A++ D +++ A+           + E A++   Q +  D +F+ A++ RG +   L +H
Sbjct: 401 EALKHDPDYVYAFNGRGNVKFARKDFEGAIQDYNQAIQSDPQFALAFYNRGNVKSALKEH 460

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           + AI+D S  + ++P       LR     A+  Y  AI+DY   + L  D+   F  + +
Sbjct: 461 RAAIEDFSQAIRLNPQYEPAYLLRGVSKAALTNYAGAIEDYSETIRLNPDNDNAFNSRGV 520

Query: 662 AFYQ 665
           A Y+
Sbjct: 521 ARYK 524


>gi|427737137|ref|YP_007056681.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
 gi|427372178|gb|AFY56134.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
           sp. PCC 7116]
          Length = 694

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 135/263 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A      Y  AI+ F+Q LK +P   +    RG AR+  ++ + AISD+T+A++ N
Sbjct: 402 NRGAAHSELKDYQEAINDFNQALKINPKLAKVYYNRGGARSELKDYQGAISDYTQALRIN 461

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                A+  RG  RA L +   AI D ++AL+  P  AD  + RG V    KD+  A+ D
Sbjct: 462 SKYANAYNSRGFTRAKLKDYQGAINDFNQALKINPKYADAYYRRGAVRGNLKDYQGAIND 521

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K+D +   AY+  G+A   + +Y+ A + + +AI+++  +  A+ +      +L 
Sbjct: 522 FNQVIKIDPKYAHAYSNRGVARYELKDYQGAIQDYTQAIKINPKYANAYYNRGVARYELK 581

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A++   QV+ I  +++  Y+ RG     L  ++ AI+D +  + I P   +  Y R
Sbjct: 582 DYQGAIQDYTQVIKIHPKYAYGYNNRGNARRELKDYQGAIQDYTQVIKIHPKLAQAYYRR 641

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
                   +Y+ AI D + A +L
Sbjct: 642 GFVRGKFKDYQGAINDLNIAANL 664



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 149/302 (49%), Gaps = 7/302 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+ +  +  Y  AI    Q +K +P Y  A   RG AR+  ++ + AI+DF +A++ NP
Sbjct: 266 KGVDKYKKKDYQGAIQDLTQAIKLNPKYAIAYNNRGVARSELKDYQEAINDFNQALKINP 325

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK-FKDFNAAVED 505
              EA   RG AR+ L +   AI D ++AL+  P  A+    RG V  +   D+  A+ D
Sbjct: 326 KLAEAHGGRGDARSNLKDYQGAIDDYNQALKINPKLAEAYLNRGTVRGRNLHDYQGAIND 385

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K++ +   AY   G A S + +Y++A     +A++++    + + +      +L 
Sbjct: 386 FNQALKINPKLAEAYGNRGAAHSELKDYQEAINDFNQALKINPKLAKVYYNRGGARSELK 445

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q L I+ +++ AY+ RG     L  ++ AI D +  L I+P   +  Y R
Sbjct: 446 DYQGAISDYTQALRINSKYANAYNSRGFTRAKLKDYQGAINDFNQALKINPKYADAYYRR 505

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT-ASKINSE 679
            +    + +Y+ AI D++  + ++      +  + +A      YQ  I  YT A KIN +
Sbjct: 506 GAVRGNLKDYQGAINDFNQVIKIDPKYAHAYSNRGVARYELKDYQGAIQDYTQAIKINPK 565

Query: 680 FC 681
           + 
Sbjct: 566 YA 567



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 134/265 (50%), Gaps = 1/265 (0%)

Query: 385 LSRGIAQV-NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           L+RG  +  N   Y  AI+ F+Q LK +P   EA   RG A +  ++ + AI+DF +A++
Sbjct: 366 LNRGTVRGRNLHDYQGAINDFNQALKINPKLAEAYGNRGAAHSELKDYQEAINDFNQALK 425

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            NP   + +  RG AR+ L +   AI D ++AL      A+  + RG    K KD+  A+
Sbjct: 426 INPKLAKVYYNRGGARSELKDYQGAISDYTQALRINSKYANAYNSRGFTRAKLKDYQGAI 485

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D +  +K++ +   AY   G    ++ +Y+ A     + I++D  +  A+ +      +
Sbjct: 486 NDFNQALKINPKYADAYYRRGAVRGNLKDYQGAINDFNQVIKIDPKYAHAYSNRGVARYE 545

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L + + A++   Q + I+ +++ AY+ RG+  + L  ++ AI+D +  + I P       
Sbjct: 546 LKDYQGAIQDYTQAIKINPKYANAYYNRGVARYELKDYQGAIQDYTQVIKIHPKYAYGYN 605

Query: 624 LRASCYHAIGEYREAIKDYDAALDL 648
            R +    + +Y+ AI+DY   + +
Sbjct: 606 NRGNARRELKDYQGAIQDYTQVIKI 630


>gi|300871059|ref|YP_003785931.1| hypothetical protein BP951000_1446 [Brachyspira pilosicoli 95/1000]
 gi|300688759|gb|ADK31430.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 653

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 132/241 (54%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G  +   ++ + AI D+ +AI+ NP+   A+  RG A+  LG+  EAI+D  K++E   N
Sbjct: 347 GIVKNNLKQYKEAIEDYDKAIELNPNDYMAYNNRGVAKMNLGQYKEAIKDFDKSIELSQN 406

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           S++  + RG V         A+ED    ++L+  N SAY   G++ S +G YK+A +   
Sbjct: 407 SSETYNNRGNVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSDLGLYKEAIKDFD 466

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KAI+L+ N  EA+ +      DL   E+A++   + + ++  +S+AY+ RG     L  +
Sbjct: 467 KAIELNPNSSEAYSNRGNAKSDLNQYEEAIKDYNKAIELNPNYSEAYNNRGNAKTNLSLY 526

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           K+A++D +  + ++P+N E    R +    +G   EAIKDY+ +++L  ++ + +    L
Sbjct: 527 KEAVEDYNKAIELNPNNSEVYNNRGTAKANLGNNEEAIKDYNRSIELNSNNAQAYFNMVL 586

Query: 662 A 662
           A
Sbjct: 587 A 587



 Score = 46.6 bits (109), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 34/58 (58%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           NR    S L L+K  I+D DKA++L+P   +AY  +G A S L + EEA+  + K  E
Sbjct: 447 NRGISKSDLGLYKEAIKDFDKAIELNPNSSEAYSNRGNAKSDLNQYEEAIKDYNKAIE 504



 Score = 43.5 bits (101), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++++++KAI  L+   +++Y      NR    + L L+K  + D +KA++L+P   + Y 
Sbjct: 495 AIKDYNKAIE-LNPNYSEAY-----NNRGNAKTNLSLYKEAVEDYNKAIELNPNNSEVYN 548

Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
            +G A + LG  EEA+  + +  E
Sbjct: 549 NRGTAKANLGNNEEAIKDYNRSIE 572



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 33/58 (56%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           NR    + L L+K  I D DKA++L+P    AY  +G + S LG  +EA+  ++K  E
Sbjct: 413 NRGNVKANLGLNKEAIEDYDKAIELNPNNSSAYNNRGISKSDLGLYKEAIKDFDKAIE 470


>gi|359461156|ref|ZP_09249719.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris sp. CCMEE 5410]
          Length = 670

 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 139/270 (51%), Gaps = 6/270 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A+    +Y  A+  +D+ LK DP Y  A  GRG  +  +++ E AI D+ +AIQS
Sbjct: 380 LGRGNARYALEEYPEALIDYDEALKHDPDYVYAFNGRGNVKFARKDFEGAIQDYNQAIQS 439

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+  RG  ++AL E   AI+D S+A+   P       +RG+      ++  A+E
Sbjct: 440 DPRFALAFYNRGNVKSALKEHRAAIEDFSQAIRLNPQYEPAYLQRGVAKAALTNYAGAIE 499

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D S  ++L+  N SA+   G+A   +GE ++A +   +AI+L+     A+ +  +    L
Sbjct: 500 DYSETLRLNPGNDSAFNNRGVARYKLGESRQAIKDFTEAIRLNPQNSFAYCNRGESKLKL 559

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD------LSSGLGIDPSN 618
            ++E A++   + + +D + S AY  RG   H L ++K AI+D      ++SG G   S 
Sbjct: 560 KDAEGAIKDCSETIRLDPQSSFAYSARGKANHALKRYKAAIEDYTQALTINSGWGNSDSP 619

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDL 648
            +  Y R S    + +   A++D   A DL
Sbjct: 620 ADSYYNRGSAKSKLNDIAGAVEDLKIAEDL 649



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 141/290 (48%), Gaps = 22/290 (7%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           A I RG A+  +R+ E AI+D++EAI+ +P + +A+  RG AR AL E  EA+ D  +AL
Sbjct: 344 AFIRRGDAKYNRRDYEDAIADYSEAIRLSPDSAQAYLGRGNARYALEEYPEALIDYDEAL 403

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           + +P+     + RG V F  KDF  A++D +  ++ D     A+   G   S++ E++ A
Sbjct: 404 KHDPDYVYAFNGRGNVKFARKDFEGAIQDYNQAIQSDPRFALAFYNRGNVKSALKEHRAA 463

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
            E   +AI+L+  +  A+         L N   A+E   + L ++     A++ RG+  +
Sbjct: 464 IEDFSQAIRLNPQYEPAYLQRGVAKAALTNYAGAIEDYSETLRLNPGNDSAFNNRGVARY 523

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD-----LELD 651
            LG+ ++AIKD +  + ++P N       +  Y   GE +  +KD + A+      + LD
Sbjct: 524 KLGESRQAIKDFTEAIRLNPQN-------SFAYCNRGESKLKLKDAEGAIKDCSETIRLD 576

Query: 652 SMEKFVL-------QCLAFYQKEIALYT-ASKINSEFCWFDIDGDIDPLF 693
               F           L  Y+  I  YT A  INS   W + D   D  +
Sbjct: 577 PQSSFAYSARGKANHALKRYKAAIEDYTQALTINS--GWGNSDSPADSYY 624



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 86/184 (46%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           SA     RG   +  +D+  A+ D S  ++L  ++  AY   G A  ++ EY +A   + 
Sbjct: 341 SATAFIRRGDAKYNRRDYEDAIADYSEAIRLSPDSAQAYLGRGNARYALEEYPEALIDYD 400

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +A++ D +++ A+           + E A++   Q +  D RF+ A++ RG +   L +H
Sbjct: 401 EALKHDPDYVYAFNGRGNVKFARKDFEGAIQDYNQAIQSDPRFALAFYNRGNVKSALKEH 460

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           + AI+D S  + ++P        R     A+  Y  AI+DY   L L   +   F  + +
Sbjct: 461 RAAIEDFSQAIRLNPQYEPAYLQRGVAKAALTNYAGAIEDYSETLRLNPGNDSAFNNRGV 520

Query: 662 AFYQ 665
           A Y+
Sbjct: 521 ARYK 524


>gi|193213585|ref|YP_001999538.1| TPR repeat-containing protein [Chlorobaculum parvum NCIB 8327]
 gi|193087062|gb|ACF12338.1| Tetratricopeptide TPR_2 repeat protein [Chlorobaculum parvum NCIB
           8327]
          Length = 314

 Score =  123 bits (308), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 87/277 (31%), Positives = 126/277 (45%), Gaps = 1/277 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RGI     G Y  AI +F Q L+  P   EA   RG AR+   +L  AI D+T+ IQ 
Sbjct: 34  VDRGIEIGQRGDYDGAIELFSQALRLSPNNAEAYYNRGLARSVIGDLNGAIDDYTQTIQR 93

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P + EA+  RG  RAALG   EA+ D+S A+  EP  A + + RG V     ++  A+ 
Sbjct: 94  KPRSFEAYNNRGFTRAALGRYAEALVDISLAIAIEPKMAQLYNNRGAVRMSMSNYRGAIA 153

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D S+ + LD     AY   GLA    G+   +      A+++D  +  AW +        
Sbjct: 154 DFSSAIDLDPVLAGAYNNRGLARGLDGDLDGSIGDFTLAVRIDPRYTVAWYNRGNARVSK 213

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + + A+E   +VL +D     A + R      LG H  A+ DL   +   P +    Y 
Sbjct: 214 DDVQGAVEDYTKVLVLDPEMVAARNNRAFARLTLGDHAGALSDLDRVVEAFPDDATGWYN 273

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           R       G+   AI D   A +L  DS+   VL+ L
Sbjct: 274 RGVVRKVAGDRLGAIADLTRAAELG-DSLAVTVLEEL 309



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 71/166 (42%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T+  + K  S +   +RG  +   G+YA A+      +  +P   +    RG  R     
Sbjct: 88  TQTIQRKPRSFEAYNNRGFTRAALGRYAEALVDISLAIAIEPKMAQLYNNRGAVRMSMSN 147

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
              AI+DF+ AI  +P    A+  RG AR   G+   +I D + A+  +P      + RG
Sbjct: 148 YRGAIADFSSAIDLDPVLAGAYNNRGLARGLDGDLDGSIGDFTLAVRIDPRYTVAWYNRG 207

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
                  D   AVED +  + LD E  +A      A  ++G++  A
Sbjct: 208 NARVSKDDVQGAVEDYTKVLVLDPEMVAARNNRAFARLTLGDHAGA 253


>gi|354566722|ref|ZP_08985893.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353544381|gb|EHC13835.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 1272

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 168/373 (45%), Gaps = 17/373 (4%)

Query: 298 GRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKE 357
           G QT  TH + + LS +S   N ++  +E++    +   K  D   + +  + K   LK 
Sbjct: 283 GIQTTDTHAIIEALSDES---NGNSVQAEAWFYEGLQQAKIGDLAGALTYYN-KSVELKP 338

Query: 358 TSNEAKRNKKFCVTRIS----------KSKSISVDFR---LSRGIAQVNEGKYASAISIF 404
            + E   N+   +  +           ++  I  DF     +RG A    G +  AI+ F
Sbjct: 339 DAYEYWFNRGLTLFYLGNFPEAIASYDRAIGIKPDFYKGWYNRGAALSELGNFTEAIASF 398

Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
           D+ LK    Y EA  GRG  +    +L  AI+ F  ++Q  P   E W  RG A A  G+
Sbjct: 399 DEALKLKHDYHEAWSGRGLVQLKLGQLSEAIASFDASLQLQPHDPEIWYFRGTALAEAGQ 458

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
           + +AI   ++ALE+ P      ++RG+  F   D+  A+ +    ++++ E   A+  L 
Sbjct: 459 NHDAIACYAQALEYHPEFDLAWYKRGVALFNIGDWEEAIANYHQAIQINPECYQAWYGLA 518

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
                +G  ++A  A+ ++ Q+  NF EAW         L N E+A+    + + I+  F
Sbjct: 519 GVQEKLGNIQEAIAAYDRSTQIQPNFHEAWIDRGVILASLGNWEEAIASWDKAIAINPNF 578

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
              +  RG+ L  LG+ ++AI      + I+       Y R      +G+Y EAI  YD 
Sbjct: 579 YLTWFNRGVALDNLGRREEAIASYDKAIEIESDFYLAWYNRGVAQFYLGQYEEAIISYDG 638

Query: 645 ALDLELDSMEKFV 657
           +L ++ D  E ++
Sbjct: 639 SLKIKPDYWEAWL 651



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 114/242 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+ Q+  G+ + AI+ FD  L+  P  PE    RGTA A   +   AI+ + +A++ +P
Sbjct: 415 RGLVQLKLGQLSEAIASFDASLQLQPHDPEIWYFRGTALAEAGQNHDAIACYAQALEYHP 474

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW +RG A   +G+  EAI +  +A++  P      +    V  K  +   A+   
Sbjct: 475 EFDLAWYKRGVALFNIGDWEEAIANYHQAIQINPECYQAWYGLAGVQEKLGNIQEAIAAY 534

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               ++      A+   G+ L+S+G +++A  +  KAI ++ NF   W +      +L  
Sbjct: 535 DRSTQIQPNFHEAWIDRGVILASLGNWEEAIASWDKAIAINPNFYLTWFNRGVALDNLGR 594

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+    + + I+  F  A++ RG+    LGQ+++AI      L I P   E    R 
Sbjct: 595 REEAIASYDKAIEIESDFYLAWYNRGVAQFYLGQYEEAIISYDGSLKIKPDYWEAWLGRG 654

Query: 627 SC 628
           S 
Sbjct: 655 SA 656



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 3/97 (3%)

Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N +  +    K+ +I+ +F L+   RG+A  N G+   AI+ +D+ ++ +  +  A   R
Sbjct: 560 NWEEAIASWDKAIAINPNFYLTWFNRGVALDNLGRREEAIASYDKAIEIESDFYLAWYNR 619

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           G A+ +  + E AI  +  +++  P   EAW  RG A
Sbjct: 620 GVAQFYLGQYEEAIISYDGSLKIKPDYWEAWLGRGSA 656


>gi|392411460|ref|YP_006448067.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
 gi|390624596|gb|AFM25803.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
          Length = 407

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 138/262 (52%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+   + G    A++   + LK       A   RG     + + ++AI D  +A++ +P+
Sbjct: 36  GLDAEDAGNLDDALARLTEALKLQGQSAHAWAKRGEVNLRKGDPQSAIKDLLQAVKLDPA 95

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+ R G A  AL +   AI+ L++A++ +P S++ L+ RG       D+++AV D  
Sbjct: 96  YAAAYTRLGFAYNALNDYEHAIEALNQAVQLDPTSSEALNTRGFAFNGKHDYDSAVRDFD 155

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
           A ++L+  +   Y   G AL+   EY +A E   +AI LD      + +    Y    + 
Sbjct: 156 AAIRLNSNDARYYNNRGFALNGKHEYARAVEDFDRAISLDSTKAMYFNNRGVAYLRQKDF 215

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++ALE  ++ L +D +FS AYH RG+ L G G+H KA++++S  + ++P +      R +
Sbjct: 216 DRALEDFERTLKLDSKFSSAYHNRGMALSGKGRHDKAVEEISKVIEMNPDSPLLYKDRGT 275

Query: 628 CYHAIGEYREAIKDYDAALDLE 649
            Y  +GE+  A+KD + A+DL+
Sbjct: 276 AYRKMGEFELAVKDLEKAIDLD 297



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 98/192 (51%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI   +Q ++ DP   EAL  RG A   + + ++A+ DF  AI+ N +    +  RG
Sbjct: 113 YEHAIEALNQAVQLDPTSSEALNTRGFAFNGKHDYDSAVRDFDAAIRLNSNDARYYNNRG 172

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            A     E   A++D  +A+  +   A   + RG+   + KDF+ A+ED    +KLD + 
Sbjct: 173 FALNGKHEYARAVEDFDRAISLDSTKAMYFNNRGVAYLRQKDFDRALEDFERTLKLDSKF 232

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
            SAY   G+ALS  G + KA E   K I+++ +    +      Y+ +   E A++ L++
Sbjct: 233 SSAYHNRGMALSGKGRHDKAVEEISKVIEMNPDSPLLYKDRGTAYRKMGEFELAVKDLEK 292

Query: 577 VLYIDKRFSKAY 588
            + +DK+F+  Y
Sbjct: 293 AIDLDKKFAPGY 304



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 37/316 (11%)

Query: 290 KASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLS 349
           +  VN R G   +   D+   +  D A        + +Y++   + N  +D   +   L+
Sbjct: 69  RGEVNLRKGDPQSAIKDLLQAVKLDPAY-------AAAYTRLGFAYNALNDYEHAIEALN 121

Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF----RLS---------RGIAQVNEGK 396
            +   L  TS+EA   + F         S   DF    RL+         RG A   + +
Sbjct: 122 -QAVQLDPTSSEALNTRGFAFNGKHDYDSAVRDFDAAIRLNSNDARYYNNRGFALNGKHE 180

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           YA A+  FD+ +  D         RG A   Q++ + A+ DF   ++ +     A+  RG
Sbjct: 181 YARAVEDFDRAISLDSTKAMYFNNRGVAYLRQKDFDRALEDFERTLKLDSKFSSAYHNRG 240

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            A +  G   +A++++SK +E  P+S  +  +RG    K  +F  AV+DL   + LDK+ 
Sbjct: 241 MALSGKGRHDKAVEEISKVIEMNPDSPLLYKDRGTAYRKMGEFELAVKDLEKAIDLDKKF 300

Query: 517 KSAYTYLG--LALSSIGEYKKAEEA---HLKAIQLDR----NFLEAWGHLTQFYQDLANS 567
              Y  L    A S+  +YK +  A     KA+ L +    + LE    + QF    AN+
Sbjct: 301 APGYAALAQVYAFSTDPKYKNSTMALKLAEKALALGKGDSPDILENLAEI-QF----ANN 355

Query: 568 EKAL--ECLQQVLYID 581
           +KAL    LQ+ L +D
Sbjct: 356 QKALAVRTLQKALTMD 371



 Score = 39.7 bits (91), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%)

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           +D  N + AL  L + L +  + + A+  RG +    G  + AIKDL   + +DP+    
Sbjct: 40  EDAGNLDDALARLTEALKLQGQSAHAWAKRGEVNLRKGDPQSAIKDLLQAVKLDPAYAAA 99

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
                  Y+A+ +Y  AI+  + A+ L+  S E    +  AF  K
Sbjct: 100 YTRLGFAYNALNDYEHAIEALNQAVQLDPTSSEALNTRGFAFNGK 144


>gi|445062480|ref|ZP_21374862.1| hypothetical protein H263_03666 [Brachyspira hampsonii 30599]
 gi|444506126|gb|ELV06506.1| hypothetical protein H263_03666 [Brachyspira hampsonii 30599]
          Length = 365

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 140/262 (53%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A+ N  +Y  AI  +D  ++  P        RG A+    E E AI D++ +I+  P 
Sbjct: 84  GVAKYNLEEYEEAIKDYDICIERLPKADYVYCNRGDAKCQLGEYEEAIEDYSRSIELKPK 143

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             + +  RG A+  L +  EAI+D  K++E +P       +RG V +  K +N A+EDL+
Sbjct: 144 NADYYYFRGLAKNKLKKYEEAIKDFDKSIELKPKDPYYYSDRGYVKYALKQYNEAIEDLN 203

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +KL+ +    Y   GL  S +GE ++A + + KAI+L+ +F+EA+ +       L N 
Sbjct: 204 KAIKLNPKEADYYNSRGLVKSDLGENEEAIKDYNKAIELNTSFIEAYQNRAFSQYKLKNY 263

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
            +A++   + + ++   +  Y+ RG + + L  ++ AI+D +  + I+P   +    R  
Sbjct: 264 NEAIKDCNKSIELNSFDNYVYNFRGAVKNKLEDYQGAIEDFNKSIEINPFYAKPYLRRGD 323

Query: 628 CYHAIGEYREAIKDYDAALDLE 649
             + +G+Y++A++DY+  ++L+
Sbjct: 324 VKYNLGQYKDALEDYNKCIELD 345



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 34/245 (13%)

Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
           K  + D+   RG+A+    KY  AI  FD+ ++  P  P     RG  +   ++   AI 
Sbjct: 141 KPKNADYYYFRGLAKNKLKKYEEAIKDFDKSIELKPKDPYYYSDRGYVKYALKQYNEAIE 200

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           D  +AI+ NP   + +  RG  ++ LGE+ EAI+D +KA+E   +  +    R    +K 
Sbjct: 201 DLNKAIKLNPKEADYYNSRGLVKSDLGENEEAIKDYNKAIELNTSFIEAYQNRAFSQYKL 260

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           K++N A++D +  ++L+  +   Y + G   + + +Y+ A E   K+I+           
Sbjct: 261 KNYNEAIKDCNKSIELNSFDNYVYNFRGAVKNKLEDYQGAIEDFNKSIE----------- 309

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                                  I+  ++K Y  RG + + LGQ+K A++D +  + +D 
Sbjct: 310 -----------------------INPFYAKPYLRRGDVKYNLGQYKDALEDYNKCIELDD 346

Query: 617 SNIEC 621
           S  E 
Sbjct: 347 SYTEA 351



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 127/288 (44%), Gaps = 36/288 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           + +A   E KY  AI  FD+ ++  P        RG  +    + E AI DFT+ I+ NP
Sbjct: 15  KALALKKEEKYEEAIKYFDKAIELQPNNTNYYNMRGIVKIDAEDNEGAIKDFTKCIELNP 74

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+   G A+  L E  EAI+D    +E  P +  +   RG    +  ++  A+ED 
Sbjct: 75  KHRIAYNNIGVAKYNLEEYEEAIKDYDICIERLPKADYVYCNRGDAKCQLGEYEEAIEDY 134

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  ++L  +N   Y + GLA + + +Y++A +   K+I+L             +Y D   
Sbjct: 135 SRSIELKPKNADYYYFRGLAKNKLKKYEEAIKDFDKSIELK-------PKDPYYYSD--- 184

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
                                   RG + + L Q+ +AI+DL+  + ++P   +    R 
Sbjct: 185 ------------------------RGYVKYALKQYNEAIEDLNKAIKLNPKEADYYNSRG 220

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTAS 674
                +GE  EAIKDY+ A++L    +E +  Q  AF Q ++  Y  +
Sbjct: 221 LVKSDLGENEEAIKDYNKAIELNTSFIEAY--QNRAFSQYKLKNYNEA 266



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 4/152 (2%)

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           +KEN   +    LAL    +Y++A +   KAI+L  N    +        D  ++E A++
Sbjct: 5   NKENAKEFYKKALALKKEEKYEEAIKYFDKAIELQPNNTNYYNMRGIVKIDAEDNEGAIK 64

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS--NIECLYLRASCYH 630
              + + ++ +   AY+  G+  + L ++++AIKD    +   P    + C    A C  
Sbjct: 65  DFTKCIELNPKHRIAYNNIGVAKYNLEEYEEAIKDYDICIERLPKADYVYCNRGDAKC-- 122

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            +GEY EAI+DY  +++L+  + + +  + LA
Sbjct: 123 QLGEYEEAIEDYSRSIELKPKNADYYYFRGLA 154


>gi|225621427|ref|YP_002722686.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225216248|gb|ACN84982.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 453

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 142/264 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+GI +   G+YA AI  +D+ +K +P   +A   +  A+     L+ AI ++ +AI+  
Sbjct: 103 SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELR 162

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                A+  RG  ++ LG   EAI+D  KAL  +PN  D  + +G++  +      A++D
Sbjct: 163 ADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKD 222

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +KL+     AY   G A  ++G Y++A + + KAI+L+ N+  A+ +      +L 
Sbjct: 223 FNKAIKLNPNYALAYNNRGNAKDNLGLYEEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLG 282

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+E   + + ++  ++ AY+ RG   + LG +++AIKD    + ++P+  +    R
Sbjct: 283 LYEEAIEDFDKAIELNPNYTDAYNNRGNAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNR 342

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
                ++G Y EAIKDYD A+ LE
Sbjct: 343 GLSKISLGLYEEAIKDYDKAIKLE 366



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 132/249 (53%), Gaps = 9/249 (3%)

Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K++S+D  L     ++G+ +   G    AI  F++ +K +P Y  A   RG A+      
Sbjct: 191 KALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGNAKDNLGLY 250

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI D+ +AI+ NP+   A+  RG A+  LG   EAI+D  KA+E  PN  D  + RG 
Sbjct: 251 EEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIELNPNYTDAYNNRGN 310

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             +    +  A++D    +KL+     AY   GL+  S+G Y++A + + KAI+L+ N  
Sbjct: 311 AKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKISLGLYEEAIKDYDKAIKLEAN-- 368

Query: 552 EAWGHLTQFY--QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           +A+ +  + +    L   E+AL+   + + +D  ++ AY  RG   + LG  K+++KD  
Sbjct: 369 DAFAYCNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYRGDTKYNLGLFKESVKDYE 428

Query: 610 SGLGIDPSN 618
           + L IDP+N
Sbjct: 429 TALLIDPNN 437



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 141/279 (50%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D   ++ IA+   G    AI  +D+ ++    Y  A   RG  ++    LE AI DF +
Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDK 191

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+  +P+  +A+  +G     LG S EAI+D +KA++  PN A   + RG        + 
Sbjct: 192 ALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGNAKDNLGLYE 251

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A++D    +KL+     AY   G A  ++G Y++A E   KAI+L+ N+ +A+ +    
Sbjct: 252 EAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIELNPNYTDAYNNRGNA 311

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
             DL   E+A++   + + ++  ++ AY  RGL    LG +++AIKD    + ++ ++  
Sbjct: 312 KYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKISLGLYEEAIKDYDKAIKLEANDAF 371

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
               R      +G + EA+KDYD A+ L+++    +V +
Sbjct: 372 AYCNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYR 410



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 132/264 (50%), Gaps = 6/264 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR---AFQRELEAAISDFTEAI 442
           +RG+ + + G    AI  FD+ L  DP   +A   +G       F +E   AI DF +AI
Sbjct: 171 NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKE---AIKDFNKAI 227

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + NP+   A+  RG A+  LG   EAI+D  KA++  PN A   + RG        +  A
Sbjct: 228 KLNPNYALAYNNRGNAKDNLGLYEEAIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEA 287

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +ED    ++L+     AY   G A   +G Y++A + + KAI+L+ N+ +A+ +      
Sbjct: 288 IEDFDKAIELNPNYTDAYNNRGNAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKI 347

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            L   E+A++   + + ++   + AY  RG     LG H++A+KD    + +D +     
Sbjct: 348 SLGLYEEAIKDYDKAIKLEANDAFAYCNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAY 407

Query: 623 YLRASCYHAIGEYREAIKDYDAAL 646
             R    + +G ++E++KDY+ AL
Sbjct: 408 VYRGDTKYNLGLFKESVKDYETAL 431



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 70/134 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ + G Y  AI  +D+ +K +P Y +A   RG ++      E AI D+ +AI+  
Sbjct: 307 NRGNAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNRGLSKISLGLYEEAIKDYDKAIKLE 366

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +   A+  RG A++ LG   EA++D  KA++ + N A     RG   +    F  +V+D
Sbjct: 367 ANDAFAYCNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYRGDTKYNLGLFKESVKD 426

Query: 506 LSACVKLDKENKSA 519
               + +D  N++A
Sbjct: 427 YETALLIDPNNETA 440



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 13/126 (10%)

Query: 8   DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDS 61
           +++Y L    + I + D+ ++++     A   R  L+K+       +++++ KAI+ L++
Sbjct: 310 NAKYDLGLYEEAIKDYDKAIKLNPNYTDAYDNR-GLSKISLGLYEEAIKDYDKAIK-LEA 367

Query: 62  LLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
             A +Y     CNR F  S L LH+  ++D DKA++LD     AY+ +G     LG  +E
Sbjct: 368 NDAFAY-----CNRGFAKSHLGLHEEALKDYDKAIKLDINYAYAYVYRGDTKYNLGLFKE 422

Query: 122 ALSVWE 127
           ++  +E
Sbjct: 423 SVKDYE 428



 Score = 46.6 bits (109), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 11/117 (9%)

Query: 18  KTICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDI 72
           + I   DE ++++  MA A      A+ +L  L  ++  + KAI +        Y     
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY----- 170

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
            NR    S L L +  I+D DKAL +DP L  AY  KG     LG  +EA+  + K 
Sbjct: 171 -NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKA 226



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +++++ KAI+ L+   A +Y      NR      L L++  I D DKA++L+P    AY 
Sbjct: 253 AIKDYDKAIK-LNPNYAFAYN-----NRGNAKDNLGLYEEAIEDFDKAIELNPNYTDAYN 306

Query: 108 LKGCAFSALGRKEEALSVWEKG 129
            +G A   LG  EEA+  ++K 
Sbjct: 307 NRGNAKYDLGLYEEAIKDYDKA 328


>gi|414078463|ref|YP_006997781.1| hypothetical protein ANA_C13292 [Anabaena sp. 90]
 gi|413971879|gb|AFW95968.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 1150

 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 144/307 (46%), Gaps = 6/307 (1%)

Query: 383  FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
            F  ++GI +   G    AI  + Q +K +P Y +A   RG  R    +   AI D+ +AI
Sbjct: 697  FYYNQGIVRYELGDKPGAIDDYTQAIKINPNYAKAYNNRGIVRNELGDKPGAIDDYNQAI 756

Query: 443  QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
            + NP+   A+  RG  R  LG+   AI D + A++  PN A+  + RGIV ++  D   A
Sbjct: 757  RINPNYALAYYNRGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYELGDKPGA 816

Query: 503  VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
            ++D +  +K +     AY   G+    +G+   A + + +AI+ + N  +A+ +      
Sbjct: 817  IDDYNLAIKFNPNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFNPNDAQAYYNRGIVRY 876

Query: 563  DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            +L +   A++   Q +  +   + AY+ RG + + LG  + AI D +  +  +P++    
Sbjct: 877  ELGDKPGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAY 936

Query: 623  YLRASCYHAIGEYREAIKDYDAALDLELDSMEK-----FVLQCLAFYQKEIALYT-ASKI 676
            Y R S  + +G+ + AI DY  A+    +         FV   L   Q  I  YT A K 
Sbjct: 937  YGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYNRGFVRNELGDKQGAIDDYTLAIKY 996

Query: 677  NSEFCWF 683
            N  +  +
Sbjct: 997  NPNYAAY 1003



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 8/283 (2%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RGI +   G    AI  ++Q ++ +P Y  A   RG  R    + + AI D+T AI+ N
Sbjct: 734  NRGIVRNELGDKPGAIDDYNQAIRINPNYALAYYNRGNVRYELGDKQGAIDDYTLAIKIN 793

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A+  RG  R  LG+   AI D + A++F PN A   + RGIV     D   A++D
Sbjct: 794  PNYANAYYNRGIVRYELGDKPGAIDDYNLAIKFNPNYAQAYYNRGIVRDDLGDKPGAIDD 853

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  +K +  +  AY   G+    +G+   A + + +AI+ + N   A+        DL 
Sbjct: 854  YNQAIKFNPNDAQAYYNRGIVRYELGDKPGAIDDYTQAIKFNPNDANAYYGRGSVRNDLG 913

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            + + A++   Q +  +   + AY+ RG + + LG  + AI D +  +  +P++    Y R
Sbjct: 914  DKQGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYNR 973

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
                + +G+ + AI DY  A+        K+     A+Y + I
Sbjct: 974  GFVRNELGDKQGAIDDYTLAI--------KYNPNYAAYYNRGI 1008



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 142/280 (50%), Gaps = 2/280 (0%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RGI + + G    AI  ++Q +K +P   +A   RG  R    +   AI D+T+AI+ N
Sbjct: 836  NRGIVRDDLGDKPGAIDDYNQAIKFNPNDAQAYYNRGIVRYELGDKPGAIDDYTQAIKFN 895

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A+  RG  R  LG+   AI D ++A++F PN A+  + RG V     D   A++D
Sbjct: 896  PNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDD 955

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  +K +  + +AY   G   + +G+ + A + +  AI+ + N+  A+ +      +L 
Sbjct: 956  YTQAIKFNPNDANAYYNRGFVRNELGDKQGAIDDYTLAIKYNPNY-AAYYNRGIVRNELG 1014

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            + + A++     +  +  ++ AY+ RG++ + LG  + AI D +  + I+P+  +  Y R
Sbjct: 1015 DKQGAIDDYTLAIKYNPNYA-AYYNRGIVRNELGDKQGAIDDYTLAIKINPNYADAYYNR 1073

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                + +G+ + AI DY  A+    +  + +V +    YQ
Sbjct: 1074 GFVRNELGDKQGAIDDYTLAIKYNPNYAQAYVRRGSVRYQ 1113



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 9/283 (3%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG  +   G    AI  +   +K +P Y  A   RG  R    +   AI D+  AI+ N
Sbjct: 768  NRGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYELGDKPGAIDDYNLAIKFN 827

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+  +A+  RG  R  LG+   AI D ++A++F PN A   + RGIV ++  D   A++D
Sbjct: 828  PNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFNPNDAQAYYNRGIVRYELGDKPGAIDD 887

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  +K +  + +AY   G   + +G+ + A + + +AI+ + N   A+        DL 
Sbjct: 888  YTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYGRGSVRNDLG 947

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            + + A++   Q +  +   + AY+ RG + + LG  + AI D +  +  +P N    Y R
Sbjct: 948  DKQGAIDDYTQAIKFNPNDANAYYNRGFVRNELGDKQGAIDDYTLAIKYNP-NYAAYYNR 1006

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
                + +G+ + AI DY  A+        K+     A+Y + I
Sbjct: 1007 GIVRNELGDKQGAIDDYTLAI--------KYNPNYAAYYNRGI 1041



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 139/279 (49%), Gaps = 3/279 (1%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RGI +   G    AI  + Q +K +P    A  GRG+ R    + + AI D+T+AI+ N
Sbjct: 870  NRGIVRYELGDKPGAIDDYTQAIKFNPNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFN 929

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A+  RG  R  LG+   AI D ++A++F PN A+  + RG V  +  D   A++D
Sbjct: 930  PNDANAYYGRGSVRNDLGDKQGAIDDYTQAIKFNPNDANAYYNRGFVRNELGDKQGAIDD 989

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  +K +  N +AY   G+  + +G+ + A + +  AI+ + N+  A+ +      +L 
Sbjct: 990  YTLAIKYN-PNYAAYYNRGIVRNELGDKQGAIDDYTLAIKYNPNY-AAYYNRGIVRNELG 1047

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            + + A++     + I+  ++ AY+ RG + + LG  + AI D +  +  +P+  +    R
Sbjct: 1048 DKQGAIDDYTLAIKINPNYADAYYNRGFVRNELGDKQGAIDDYTLAIKYNPNYAQAYVRR 1107

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVL-QCLAF 663
             S  + +G+   A +D   A  L  D        Q +AF
Sbjct: 1108 GSVRYQLGDKPGAKEDLQRAAQLFKDQGNTAAYEQTMAF 1146



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 142/297 (47%), Gaps = 9/297 (3%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K K I + +   +G+A  + GKY  AI+   Q +K  P +  A     +      +L+ A
Sbjct: 589 KPKFIHLAY-YGKGLALGSSGKYPEAITALQQAVKSQPDFVPAWDYLSSVYRESNQLDKA 647

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           ++   +AIQ  P+    + ++    + L +  EA   ++KA+E  P +A   + +GIV +
Sbjct: 648 LAAINQAIQLQPNNPNLYNQKRGVLSDLKKYKEAAAAINKAIELSPRAA-FYYNQGIVRY 706

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           +  D   A++D +  +K++     AY   G+  + +G+   A + + +AI+++ N+  A+
Sbjct: 707 ELGDKPGAIDDYTQAIKINPNYAKAYNNRGIVRNELGDKPGAIDDYNQAIRINPNYALAY 766

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            +      +L + + A++     + I+  ++ AY+ RG++ + LG    AI D +  +  
Sbjct: 767 YNRGNVRYELGDKQGAIDDYTLAIKINPNYANAYYNRGIVRYELGDKPGAIDDYNLAIKF 826

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           +P+  +  Y R      +G+   AI DY+ A+    +  +       A+Y + I  Y
Sbjct: 827 NPNYAQAYYNRGIVRDDLGDKPGAIDDYNQAIKFNPNDAQ-------AYYNRGIVRY 876



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 4/181 (2%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG  +   G    AI  +   +K +P Y  A   RG  R    + + AI D+T AI+ N
Sbjct: 972  NRGFVRNELGDKQGAIDDYTLAIKYNPNY-AAYYNRGIVRNELGDKQGAIDDYTLAIKYN 1030

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A+  RG  R  LG+   AI D + A++  PN AD  + RG V  +  D   A++D
Sbjct: 1031 PNYA-AYYNRGIVRNELGDKQGAIDDYTLAIKINPNYADAYYNRGFVRNELGDKQGAIDD 1089

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQD 563
             +  +K +     AY   G     +G+   A+E   +A QL  D+    A+     F ++
Sbjct: 1090 YTLAIKYNPNYAQAYVRRGSVRYQLGDKPGAKEDLQRAAQLFKDQGNTAAYEQTMAFLKE 1149

Query: 564  L 564
            L
Sbjct: 1150 L 1150



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 118/278 (42%), Gaps = 45/278 (16%)

Query: 396 KYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y  AI  FD  + + P +   A  G+G A     +   AI+   +A++S P    AW  
Sbjct: 574 RYPEAIQAFDAAINQKPKFIHLAYYGKGLALGSSGKYPEAITALQQAVKSQPDFVPAWDY 633

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHE-RGIVNFKFKDFNAAVEDLSACVKLD 513
                    +  +A+  +++A++ +PN+ ++ ++ RG+                      
Sbjct: 634 LSSVYRESNQLDKALAAINQAIQLQPNNPNLYNQKRGV---------------------- 671

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
                        LS + +YK+A  A  KAI+L       +      Y+ L +   A++ 
Sbjct: 672 -------------LSDLKKYKEAAAAINKAIELSPRAAFYYNQGIVRYE-LGDKPGAIDD 717

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             Q + I+  ++KAY+ RG++ + LG    AI D +  + I+P+     Y R +  + +G
Sbjct: 718 YTQAIKINPNYAKAYNNRGIVRNELGDKPGAIDDYNQAIRINPNYALAYYNRGNVRYELG 777

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           + + AI DY  A+ +  +          A+Y + I  Y
Sbjct: 778 DKQGAIDDYTLAIKINPNYAN-------AYYNRGIVRY 808



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 41/213 (19%)

Query: 488 ERGIVNFKFKDFNAAVEDLSACV-KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           ERG   ++ + +  A++   A + +  K    AY   GLAL S G+Y +A  A  +A++ 
Sbjct: 564 ERGNQLWRLRRYPEAIQAFDAAINQKPKFIHLAYYGKGLALGSSGKYPEAITALQQAVKS 623

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQV---------LYIDKR-------------- 583
             +F+ AW +L+  Y++    +KAL  + Q          LY  KR              
Sbjct: 624 QPDFVPAWDYLSSVYRESNQLDKALAAINQAIQLQPNNPNLYNQKRGVLSDLKKYKEAAA 683

Query: 584 -FSKA---------YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             +KA         Y+ +G++ + LG    AI D +  + I+P+  +    R    + +G
Sbjct: 684 AINKAIELSPRAAFYYNQGIVRYELGDKPGAIDDYTQAIKINPNYAKAYNNRGIVRNELG 743

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           +   AI DY+ A+ +  +         LA+Y +
Sbjct: 744 DKPGAIDDYNQAIRINPN-------YALAYYNR 769


>gi|188994836|ref|YP_001929088.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
 gi|188594516|dbj|BAG33491.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
          Length = 818

 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 136/264 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+     G Y  AI  + + ++ D  +  A  GRG A   +   E AI D+++AI+ +
Sbjct: 30  NRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEAIKDYSQAIELD 89

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                A+  RG A +  G   +AI+D S+A+E +   A   ++RG    +   +  A++D
Sbjct: 90  DKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKD 149

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  ++L+ +   AY   G+A    G YK+A + + +AI+LD  F+ A+      Y    
Sbjct: 150 FSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKG 209

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + E+A++   Q + +D +F  AYH RG+     G +++AIKD S  + +D       Y R
Sbjct: 210 SYEEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDR 269

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
            + Y   G Y EAIKDY  A++L+
Sbjct: 270 GNAYCEKGSYEEAIKDYSKAIELD 293



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 133/264 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A   +G Y  AI  + Q ++ D  +  A   RG A   +   E AI DF++AI+ N 
Sbjct: 99  RGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEAIKDFSKAIELND 158

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG A    G   EAI+D S+A+E +       H RGI  FK   +  A++D 
Sbjct: 159 KYTYAYHSRGIAYCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGSYEEAIKDY 218

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  ++LD +   AY   G+A    G Y++A + + KAI+LD  F  A+      Y +  +
Sbjct: 219 SQAIELDGKFVHAYHGRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDRGNAYCEKGS 278

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A++   + + +D +F+ AYH RG      G +++AIKD S  + +D   I     R 
Sbjct: 279 YEEAIKDYSKAIELDGKFAHAYHNRGNAYCEKGSYEEAIKDYSQAIELDDKYILGYNGRG 338

Query: 627 SCYHAIGEYREAIKDYDAALDLEL 650
             Y+ IG++ ++  D++  L L L
Sbjct: 339 VAYYEIGDFEKSQADFNTVLYLIL 362



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 116/224 (51%)

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + N     A+  RG     +G   EAI+D SKA+E +       H RGI  FK   +  A
Sbjct: 19  EPNRQEAIAYYNRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEA 78

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           ++D S  ++LD +   AY   G A S  G YKKA + + +AI+LD  F  A+      Y 
Sbjct: 79  IKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYC 138

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +  + E+A++   + + ++ +++ AYH RG+     G +K+AIKD S  + +D   +   
Sbjct: 139 EKGSYEEAIKDFSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIELDGKFVHAY 198

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           + R   Y   G Y EAIKDY  A++L+   +  +  + +A+++K
Sbjct: 199 HGRGIAYFKKGSYEEAIKDYSQAIELDGKFVHAYHGRGIAYFKK 242



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 115/233 (49%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           A   RG         E AI D+++AI+ +     A+  RG A    G   EAI+D S+A+
Sbjct: 27  AYYNRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKGSYEEAIKDYSQAI 86

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           E +   A   H RG    K   +  A++D S  ++LD +   AY   G A    G Y++A
Sbjct: 87  ELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDRGNAYCEKGSYEEA 146

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
            +   KAI+L+  +  A+      Y +  + ++A++   Q + +D +F  AYH RG+   
Sbjct: 147 IKDFSKAIELNDKYTYAYHSRGIAYCEKGSYKEAIKDYSQAIELDGKFVHAYHGRGIAYF 206

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             G +++AIKD S  + +D   +   + R   Y   G Y EAIKDY  A++L+
Sbjct: 207 KKGSYEEAIKDYSQAIELDGKFVHAYHGRGIAYFKKGLYEEAIKDYSKAIELD 259



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 75/143 (52%)

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           LS   + +++   AY   G+    +G Y++A + + KAI+LD  F+ A+      Y    
Sbjct: 14  LSNVPEPNRQEAIAYYNRGVGCCIVGSYEEAIKDYSKAIELDDKFVHAYHGRGIAYFKKG 73

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + E+A++   Q + +D +++ AYH RG      G +KKAIKD S  + +D       Y R
Sbjct: 74  SYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKFAHAYYDR 133

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
            + Y   G Y EAIKD+  A++L
Sbjct: 134 GNAYCEKGSYEEAIKDFSKAIEL 156



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 5/142 (3%)

Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           S++I +D +       RGIA   +G Y  AI  + + ++ D  +  A   RG A   +  
Sbjct: 219 SQAIELDGKFVHAYHGRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYYDRGNAYCEKGS 278

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            E AI D+++AI+ +     A+  RG A    G   EAI+D S+A+E +       + RG
Sbjct: 279 YEEAIKDYSKAIELDGKFAHAYHNRGNAYCEKGSYEEAIKDYSQAIELDDKYILGYNGRG 338

Query: 491 IVNFKFKDFNAAVEDLSACVKL 512
           +  ++  DF  +  D +  + L
Sbjct: 339 VAYYEIGDFEKSQADFNTVLYL 360



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 12/98 (12%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +++++S+AI  LD     +Y       R   Y +  L++  I+D  KA++LD     AY 
Sbjct: 214 AIKDYSQAIE-LDGKFVHAYH-----GRGIAYFKKGLYEEAIKDYSKAIELDGKFAHAYY 267

Query: 108 LKGCAFSALGRKEEALSVWEKGYE------HALHQSAD 139
            +G A+   G  EEA+  + K  E      HA H   +
Sbjct: 268 DRGNAYCEKGSYEEAIKDYSKAIELDGKFAHAYHNRGN 305


>gi|118381868|ref|XP_001024094.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89305861|gb|EAS03849.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 850

 Score =  122 bits (307), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 138/261 (52%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ Q ++GK+  A++ + + ++ DP Y EA   RG A     + + AI ++ +A++ NP+
Sbjct: 10  GLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVALNSLNQYQEAIKNYNKALEINPN 69

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+  +G +  AL +  EAI   +K +E +PN       +G+  F    F  A+ + +
Sbjct: 70  YKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLNQFQEALNNFN 129

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++ D +   A   + L+   +G+ ++A   + KAI LD N+  A+ +    Y +    
Sbjct: 130 KALQCDPKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYKNAYLNRGLLYMNEGQK 189

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++AL+  +Q++ ID +F+ AY   GL L  LGQ+++AI+     + ID +     Y +A 
Sbjct: 190 QQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQIDKNAFLAYYNKAI 249

Query: 628 CYHAIGEYREAIKDYDAALDL 648
               +G+ +EA+ +Y+  +++
Sbjct: 250 LCKQLGKNQEALNNYNKVIEI 270



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 168/335 (50%), Gaps = 10/335 (2%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +   +K+  I+ +++L+   +GI+     +   AIS + ++++ DP Y +A + +G   
Sbjct: 56  AIKNYNKALEINPNYKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCF 115

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
               + + A+++F +A+Q +P    A      +   LG+S +A+    KA+  +PN  + 
Sbjct: 116 FNLNQFQEALNNFNKALQCDPKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYKNA 175

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
              RG++         A++D    + +D +  +AY  +GL L  +G+ ++A + + KAIQ
Sbjct: 176 YLNRGLLYMNEGQKQQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQ 235

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +D+N   A+ +     + L  +++AL    +V+ I+  +S AY  +G L    G++++AI
Sbjct: 236 IDKNAFLAYYNKAILCKQLGKNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAI 295

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           K+    + +DP++ +  Y +     A+G Y+E+I++Y+ A+ L+ ++       C     
Sbjct: 296 KNYDKVIQLDPNHKQVYYNKGISLKALGRYQESIENYNKAIQLDPNN-------CKIQNN 348

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           K +AL    K       ++    IDP F   +  R
Sbjct: 349 KGLALEALGKSQDALDCYNKAIQIDPFFTLSYANR 383



 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 117/224 (52%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG+  +NEG+   A+  F QI+  DP +  A I  G       + + AI  + +AIQ 
Sbjct: 177 LNRGLLYMNEGQKQQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQI 236

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           + +A  A+  +      LG++ EA+ + +K +E  PN ++    +G +      +  A++
Sbjct: 237 DKNAFLAYYNKAILCKQLGKNQEALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAIK 296

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           +    ++LD  +K  Y   G++L ++G Y+++ E + KAIQLD N  +   +     + L
Sbjct: 297 NYDKVIQLDPNHKQVYYNKGISLKALGRYQESIENYNKAIQLDPNNCKIQNNKGLALEAL 356

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             S+ AL+C  + + ID  F+ +Y  R L+   LG   +A++D+
Sbjct: 357 GKSQDALDCYNKAIQIDPFFTLSYANRALVNFNLGNKDQAVEDM 400



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 41/253 (16%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
           + + + G  + + G+  EA+   SKA+E +P   +    RG+       +  A+++ +  
Sbjct: 4   QKYHQAGLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVALNSLNQYQEAIKNYNKA 63

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA-------WGHLTQFYQ 562
           ++++   K AY   G++L ++ + ++A   + K +++D N+ +A       + +L QF +
Sbjct: 64  LEINPNYKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLNQFQE 123

Query: 563 DLANSEKALEC---------------------LQQVLYIDK------RFSKAYHLRGLLL 595
            L N  KAL+C                      Q + Y DK       +  AY  RGLL 
Sbjct: 124 ALNNFNKALQCDPKYSLACYNIALSYQKLGQSQQALTYYDKAINLDPNYKNAYLNRGLLY 183

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
              GQ ++A++D    + IDP               +G+ +EAI+ YD A+ ++ ++   
Sbjct: 184 MNEGQKQQALQDFRQIIAIDPKFTNAYINVGLTLQQLGQNQEAIQHYDKAIQIDKNAF-- 241

Query: 656 FVLQCLAFYQKEI 668
                LA+Y K I
Sbjct: 242 -----LAYYNKAI 249



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 68/128 (53%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L++G   +  GKY  AI  +D++++ DP + +    +G +       + +I ++ +AIQ 
Sbjct: 279 LNKGSLFLFSGKYEEAIKNYDKVIQLDPNHKQVYYNKGISLKALGRYQESIENYNKAIQL 338

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+  +    +G A  ALG+S +A+   +KA++ +P        R +VNF   + + AVE
Sbjct: 339 DPNNCKIQNNKGLALEALGKSQDALDCYNKAIQIDPFFTLSYANRALVNFNLGNKDQAVE 398

Query: 505 DLSACVKL 512
           D+    KL
Sbjct: 399 DMKQASKL 406



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 21/188 (11%)

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALE 572
           Y   GL   S G++++A  ++ KAI+LD  + EA+         L Q+ + + N  KALE
Sbjct: 6   YHQAGLTQQSQGKFQEAVNSYSKAIELDPQYTEAYCNRGVALNSLNQYQEAIKNYNKALE 65

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
                  I+  +  AY+ +G+ L  L Q ++AI   +  + IDP+  +    +  C+  +
Sbjct: 66  -------INPNYKLAYYNKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNL 118

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPL 692
            +++EA+ +++ AL  +     K+ L C   Y   ++     +      ++D   ++DP 
Sbjct: 119 NQFQEALNNFNKALQCD----PKYSLAC---YNIALSYQKLGQSQQALTYYDKAINLDPN 171

Query: 693 FKEYWCKR 700
           +K  +  R
Sbjct: 172 YKNAYLNR 179



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 20/158 (12%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++ ++SKAI  LD    ++Y     CNR    + L  ++  I++ +KAL+++P    AY 
Sbjct: 22  AVNSYSKAIE-LDPQYTEAY-----CNRGVALNSLNQYQEAIKNYNKALEINPNYKLAYY 75

Query: 108 LKGCAFSALGRKEEALSVWEK------GYEHA-LHQSA---DLKQFLELEELLTAAKQ-- 155
            KG +  AL + +EA+S + K       Y+ A L++     +L QF E       A Q  
Sbjct: 76  NKGISLQALKQLQEAISCYTKVVEIDPNYKQAHLNKGLCFFNLNQFQEALNNFNKALQCD 135

Query: 156 -DRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENH 192
              S+ C Y+++ S   L  S+  L   DK      N+
Sbjct: 136 PKYSLAC-YNIALSYQKLGQSQQALTYYDKAINLDPNY 172



 Score = 42.7 bits (99), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 17/126 (13%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLC--------SLRNWSKAIRILDSLL 63
           +L +  + I   D+ +++D    +A  A    A LC        +L N++K I I +   
Sbjct: 219 QLGQNQEAIQHYDKAIQIDK---NAFLAYYNKAILCKQLGKNQEALNNYNKVIEI-NPNY 274

Query: 64  AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           + +Y      N+   +     ++  I++ DK +QLDP   Q Y  KG +  ALGR +E++
Sbjct: 275 SNAY-----LNKGSLFLFSGKYEEAIKNYDKVIQLDPNHKQVYYNKGISLKALGRYQESI 329

Query: 124 SVWEKG 129
             + K 
Sbjct: 330 ENYNKA 335


>gi|338210531|ref|YP_004654580.1| hypothetical protein [Runella slithyformis DSM 19594]
 gi|336304346|gb|AEI47448.1| Tetratricopeptide TPR_1 repeat-containing protein [Runella
           slithyformis DSM 19594]
          Length = 446

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 130/240 (54%), Gaps = 2/240 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +A+ N      AI  FD+ ++ +P Y +A + RG ++A Q +  +AI DF+ +I+ N
Sbjct: 66  NRAMAKANLKDNRGAILDFDRSIELNPKYSDAYLYRGVSKAKQDDYRSAIQDFSRSIELN 125

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   + + +RG  RA L     A+QDL++ +E EPN+A  L+ RG V  K +DF +A+ D
Sbjct: 126 PDDPQGYLQRGINRARLENYRGALQDLNRTVELEPNNAGALYTRGNVKLKLEDFTSALAD 185

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  + L  ++ SAY   G   + + ++  A   + KAI+L  +  E++ +       L 
Sbjct: 186 FSRVIDLTPKSSSAYAGRGFTRTKLNDFNGAVADYSKAIELKADDSESFYNRGFARSKLE 245

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID--PSNIECLY 623
             E+A+    Q + +D +  +AY+ RG     LG  ++AI DL+  + I+  P++ +  Y
Sbjct: 246 KYEEAIADFDQAIILDPQNHRAYYGRGFCKSKLGSQREAISDLNKAVDINNTPTDTKVTY 305



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 15/283 (5%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I K++  + ++    G+ +   G + +A+  F+  +   P    +   R  A+A  ++  
Sbjct: 20  ILKAQKTAAEY-FEEGVTKSKAGDFMAALQAFNLAITMSPENAPSYYNRAMAKANLKDNR 78

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI DF  +I+ NP   +A+  RG ++A   +   AIQD S+++E  P+      +RGI 
Sbjct: 79  GAILDFDRSIELNPKYSDAYLYRGVSKAKQDDYRSAIQDFSRSIELNPDDPQGYLQRGIN 138

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             + +++  A++DL+  V+L+  N  A    G     + ++  A     + I L      
Sbjct: 139 RARLENYRGALQDLNRTVELEPNNAGALYTRGNVKLKLEDFTSALADFSRVIDLTPKSSS 198

Query: 553 AWG-------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           A+         L  F   +A+  KA+E     L  D   S++++ RG     L ++++AI
Sbjct: 199 AYAGRGFTRTKLNDFNGAVADYSKAIE-----LKADD--SESFYNRGFARSKLEKYEEAI 251

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            D    + +DP N    Y R  C   +G  REAI D + A+D+
Sbjct: 252 ADFDQAIILDPQNHRAYYGRGFCKSKLGSQREAISDLNKAVDI 294



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 128/286 (44%), Gaps = 36/286 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RGI +     Y  A+   ++ ++ +P    AL  RG  +    +  +A++DF+  I  
Sbjct: 133 LQRGINRARLENYRGALQDLNRTVELEPNNAGALYTRGNVKLKLEDFTSALADFSRVIDL 192

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P +  A+  RG  R  L +   A+ D SKA+E + + ++  + RG    K + +  A+ 
Sbjct: 193 TPKSSSAYAGRGFTRTKLNDFNGAVADYSKAIELKADDSESFYNRGFARSKLEKYEEAIA 252

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------------RN 549
           D    + LD +N  AY   G   S +G  ++A     KA+ ++               R+
Sbjct: 253 DFDQAIILDPQNHRAYYGRGFCKSKLGSQREAISDLNKAVDINNTPTDTKVTYAGRITRS 312

Query: 550 FLEAWGHLTQ----------------FYQDLANSEK-----ALECLQQVLYIDKRFSKAY 588
            L+   ++ Q                F + +  +++     A+  L + + ++  +S+AY
Sbjct: 313 VLDDLRNVVQERNKIYELSSERSEALFARGVGKNKQGDAKGAIIDLNKAIELNPTYSEAY 372

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
             RG++   +G  + A++D SS + ++P   E  Y+R    H++G+
Sbjct: 373 FTRGMVKSAIGDQRGAVQDCSSAVKLNPKYAEAYYVRGLIKHSLGD 418



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 2/225 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG  +     +  A++ + + ++      E+   RG AR+   + E AI+DF +AI  +P
Sbjct: 203 RGFTRTKLNDFNGAVADYSKAIELKADDSESFYNRGFARSKLEKYEEAIADFDQAIILDP 262

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFE--PNSADILHERGIVNFKFKDFNAAVE 504
               A+  RG  ++ LG   EAI DL+KA++    P    + +   I      D    V+
Sbjct: 263 QNHRAYYGRGFCKSKLGSQREAISDLNKAVDINNTPTDTKVTYAGRITRSVLDDLRNVVQ 322

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           + +   +L  E   A    G+  +  G+ K A     KAI+L+  + EA+         +
Sbjct: 323 ERNKIYELSSERSEALFARGVGKNKQGDAKGAIIDLNKAIELNPTYSEAYFTRGMVKSAI 382

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
            +   A++     + ++ ++++AY++RGL+ H LG       DLS
Sbjct: 383 GDQRGAVQDCSSAVKLNPKYAEAYYVRGLIKHSLGDENSGCLDLS 427



 Score = 66.6 bits (161), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           EAL  RG  +  Q + + AI D  +AI+ NP+  EA+  RG  ++A+G+   A+QD S A
Sbjct: 336 EALFARGVGKNKQGDAKGAIIDLNKAIELNPTYSEAYFTRGMVKSAIGDQRGAVQDCSSA 395

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           ++  P  A+  + RG++     D N      S C+ L K  +  YT
Sbjct: 396 VKLNPKYAEAYYVRGLIKHSLGDEN------SGCLDLSKAGELGYT 435



 Score = 43.9 bits (102), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++ ++SKAI +      ++ + +   NR F  S+LE ++  I D D+A+ LDP   +AY 
Sbjct: 216 AVADYSKAIEL------KADDSESFYNRGFARSKLEKYEEAIADFDQAIILDPQNHRAYY 269

Query: 108 LKGCAFSALGRKEEALSVWEK 128
            +G   S LG + EA+S   K
Sbjct: 270 GRGFCKSKLGSQREAISDLNK 290


>gi|225620899|ref|YP_002722157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215719|gb|ACN84453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 952

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 148/282 (52%), Gaps = 4/282 (1%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           SK++ V F   RG+++    +Y  +I  F++I+K +P   E+   RG ++A   + E +I
Sbjct: 244 SKNVEVYF--YRGVSKAKLERYEESIVDFNEIIKLNPKNVESYFNRGVSKAKLEKYEESI 301

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            DF E I+ NP   E++  RG ++A L +  EAI D + A++  PN   +    G+    
Sbjct: 302 VDFNEVIKLNPKNVESYFNRGVSKAKLEKYEEAIADFNNAIKLNPNDEKVYFASGLAKAD 361

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
            + +  ++ D +  +KL+ +N  AY Y G+A + +  Y+++     + I+LD   +EA+ 
Sbjct: 362 LERYEESIVDFNEVIKLNSKNVEAYFYRGVAKADLERYEESIVDFNEVIKLDPKNVEAYF 421

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           +       L   E+++    +V+  +    KAY  RGL    L ++KKAI D +  + ++
Sbjct: 422 YRGVSKAKLEKYEESIIDFNEVITFNPNDEKAYFNRGLSKAQLERYKKAIVDFNKVIKLN 481

Query: 616 PSNIECLYL-RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           P N E  YL R    + + +Y EAI D++ A+ L  ++ E +
Sbjct: 482 PKN-EIAYLARGISNYELKKYEEAIVDFNKAIKLNPNNEESY 522



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 135/262 (51%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+     Y  AI  F++ ++ +    E+   RG A+A  +  E AI DF ++I+ NP
Sbjct: 83  RGLAKTELKLYEEAIEDFNESIELNLKNWESYFARGIAKANLKLYEEAIEDFNKSIELNP 142

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG ++A L +  E+I D +K +E  P +      RG    K K +  ++ D 
Sbjct: 143 KNEKAYFNRGISKAKLKKYEESIVDFNKVIELNPKNEKAYFNRGFAKAKLKKYEKSIVDF 202

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +KLD +N   Y Y G++ + +  Y+++      AI+LD   +E + +       L  
Sbjct: 203 NNAIKLDSKNVEVYFYRGISKAKLERYEESIVDFNNAIKLDSKNVEVYFYRGVSKAKLER 262

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+++    +++ ++ +  ++Y  RG+    L +++++I D +  + ++P N+E  + R 
Sbjct: 263 YEESIVDFNEIIKLNPKNVESYFNRGVSKAKLEKYEESIVDFNEVIKLNPKNVESYFNRG 322

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
                + +Y EAI D++ A+ L
Sbjct: 323 VSKAKLEKYEEAIADFNNAIKL 344



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 136/272 (50%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+ ++    Y  AI  F++ +  +    +A   RG A+   +  E AI DF E+I+ 
Sbjct: 47  FNRGLEKIESKLYEEAIKYFNKTIGLNQKNRDAYFFRGLAKTELKLYEEAIEDFNESIEL 106

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N    E++  RG A+A L    EAI+D +K++E  P +      RGI   K K +  ++ 
Sbjct: 107 NLKNWESYFARGIAKANLKLYEEAIEDFNKSIELNPKNEKAYFNRGISKAKLKKYEESIV 166

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++L+ +N+ AY   G A + + +Y+K+      AI+LD   +E + +       L
Sbjct: 167 DFNKVIELNPKNEKAYFNRGFAKAKLKKYEKSIVDFNNAIKLDSKNVEVYFYRGISKAKL 226

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+++      + +D +  + Y  RG+    L +++++I D +  + ++P N+E  + 
Sbjct: 227 ERYEESIVDFNNAIKLDSKNVEVYFYRGVSKAKLERYEESIVDFNEIIKLNPKNVESYFN 286

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           R      + +Y E+I D++  + L   ++E +
Sbjct: 287 RGVSKAKLEKYEESIVDFNEVIKLNPKNVESY 318



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 149/279 (53%), Gaps = 2/279 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RGIA+ N   Y  AI  F++ ++ +P   +A   RG ++A  ++ E +I DF + I+ 
Sbjct: 115 FARGIAKANLKLYEEAIEDFNKSIELNPKNEKAYFNRGISKAKLKKYEESIVDFNKVIEL 174

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   +A+  RG A+A L +  ++I D + A++ +  + ++   RGI   K + +  ++ 
Sbjct: 175 NPKNEKAYFNRGFAKAKLKKYEKSIVDFNNAIKLDSKNVEVYFYRGISKAKLERYEESIV 234

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  +KLD +N   Y Y G++ + +  Y+++     + I+L+   +E++ +       L
Sbjct: 235 DFNNAIKLDSKNVEVYFYRGVSKAKLERYEESIVDFNEIIKLNPKNVESYFNRGVSKAKL 294

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+++    +V+ ++ +  ++Y  RG+    L ++++AI D ++ + ++P N E +Y 
Sbjct: 295 EKYEESIVDFNEVIKLNPKNVESYFNRGVSKAKLEKYEEAIADFNNAIKLNP-NDEKVYF 353

Query: 625 RASCYHA-IGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            +    A +  Y E+I D++  + L   ++E +  + +A
Sbjct: 354 ASGLAKADLERYEESIVDFNEVIKLNSKNVEAYFYRGVA 392



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 139/273 (50%), Gaps = 2/273 (0%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           SK++ V F   RGI++    +Y  +I  F+  +K D    E    RG ++A     E +I
Sbjct: 210 SKNVEVYF--YRGISKAKLERYEESIVDFNNAIKLDSKNVEVYFYRGVSKAKLERYEESI 267

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            DF E I+ NP   E++  RG ++A L +  E+I D ++ ++  P + +    RG+   K
Sbjct: 268 VDFNEIIKLNPKNVESYFNRGVSKAKLEKYEESIVDFNEVIKLNPKNVESYFNRGVSKAK 327

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
            + +  A+ D +  +KL+  ++  Y   GLA + +  Y+++     + I+L+   +EA+ 
Sbjct: 328 LEKYEEAIADFNNAIKLNPNDEKVYFASGLAKADLERYEESIVDFNEVIKLNSKNVEAYF 387

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           +      DL   E+++    +V+ +D +  +AY  RG+    L +++++I D +  +  +
Sbjct: 388 YRGVAKADLERYEESIVDFNEVIKLDPKNVEAYFYRGVSKAKLEKYEESIIDFNEVITFN 447

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           P++ +  + R      +  Y++AI D++  + L
Sbjct: 448 PNDEKAYFNRGLSKAQLERYKKAIVDFNKVIKL 480



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 138/263 (52%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +V+   +RG+++    KY  +I  F++++K +P   E+   RG ++A   + E AI+DF 
Sbjct: 280 NVESYFNRGVSKAKLEKYEESIVDFNEVIKLNPKNVESYFNRGVSKAKLEKYEEAIADFN 339

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            AI+ NP+  + +   G A+A L    E+I D ++ ++    + +    RG+     + +
Sbjct: 340 NAIKLNPNDEKVYFASGLAKADLERYEESIVDFNEVIKLNSKNVEAYFYRGVAKADLERY 399

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             ++ D +  +KLD +N  AY Y G++ + + +Y+++     + I  + N  +A+ +   
Sbjct: 400 EESIVDFNEVIKLDPKNVEAYFYRGVSKAKLEKYEESIIDFNEVITFNPNDEKAYFNRGL 459

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
               L   +KA+    +V+ ++ +   AY  RG+  + L ++++AI D +  + ++P+N 
Sbjct: 460 SKAQLERYKKAIVDFNKVIKLNPKNEIAYLARGISNYELKKYEEAIVDFNKAIKLNPNNE 519

Query: 620 ECLYLRASCYHAIGEYREAIKDY 642
           E  + R      + +Y++AI D+
Sbjct: 520 ESYFNRGILKIHLKKYKQAINDF 542


>gi|170738881|ref|YP_001767536.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
 gi|168193155|gb|ACA15102.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
          Length = 1056

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 148/282 (52%), Gaps = 2/282 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  ++ +Y  AI+ ++Q L+ DP Y  A + RG A   + E + AI+D+ + +Q +
Sbjct: 133 NRGLAFFSKEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQID 192

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
           P +  ++  RG A    GE   A+ D ++AL  +P     L  RG V F+ K  +++A+E
Sbjct: 193 PRSVVSYNNRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDV-FRIKGQYDSAIE 251

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           + +  ++L+ ++K AY   G    + GEY +A   +  A+Q+D  ++ A  +    +   
Sbjct: 252 NYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVNRGDAFVSK 311

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + ++A+      L I+  ++ AY+ RG+ L   G++ +AI D    L +DP  +     
Sbjct: 312 GDYDRAIGDYGHALQINPNYAFAYNGRGVALQNKGEYDRAIMDYDQALRLDPKYVFAFAN 371

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           R   + + GE+  AI DY+ AL L  +  + +  + L+F  K
Sbjct: 372 RGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNK 413



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 133/278 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RG++  N+ +Y  AI  ++Q+++ DP +  A   RG A   + E   AI+D+ +A+  +
Sbjct: 405 GRGLSFQNKAQYNRAIEDYEQVIRLDPRFVAAYNNRGFALVSKGEPTLAIADYDKALLLD 464

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +   +  RG+A    GE   AI D  +AL   P  A  L+ R  +     + + A+  
Sbjct: 465 PKSATVYANRGRAFQDKGEYDRAIADYDQALRLNPKDAIALNNRADILRLRHEHDRAIAS 524

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L+ +   AY   GLA    GEY +A   + +A+QL+  ++ A+ +    Y+   
Sbjct: 525 YDQALQLNPKYVGAYNSRGLAFQDKGEYDRAIANYDQALQLNPRYITAYINRGDAYRRKG 584

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +A+    Q L ID+    AY+ RGL  H  G++ +AI D    L IDP        R
Sbjct: 585 EHARAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAIIDYDRALQIDPMYSTGFINR 644

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
              +H  GEY  AI DYD AL ++  S   +  +   F
Sbjct: 645 GFAFHKKGEYDRAIADYDRALQIDPRSATAYNNRGFTF 682



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 5/291 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A   +G+Y  A++ ++Q L  DP Y  ALI RG     + + ++AI ++ +A+Q N
Sbjct: 201 NRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDVFRIKGQYDSAIENYNQALQLN 260

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +  A+  RG      GE   AI D + AL+ +P     L  RG       D++ A+ D
Sbjct: 261 PKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVNRGDAFVSKGDYDRAIGD 320

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++++     AY   G+AL + GEY +A   + +A++LD  ++ A+ +    ++   
Sbjct: 321 YGHALQINPNYAFAYNGRGVALQNKGEYDRAIMDYDQALRLDPKYVFAFANRGDAFRSKG 380

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             + A+    Q L +   ++KAY+ RGL      Q+ +AI+D    + +DP  +     R
Sbjct: 381 EHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIEDYEQVIRLDPRFVAAYNNR 440

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
                + GE   AI DYD AL L+  S   +  +  AF     Y + IA Y
Sbjct: 441 GFALVSKGEPTLAIADYDKALLLDPKSATVYANRGRAFQDKGEYDRAIADY 491



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 142/281 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  ++G++  AI+ ++Q L+  P Y +A  GRG +   + +   AI D+ + I+ +
Sbjct: 371 NRGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIEDYEQVIRLD 430

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A  + GE   AI D  KAL  +P SA +   RG       +++ A+ D
Sbjct: 431 PRFVAAYNNRGFALVSKGEPTLAIADYDKALLLDPKSATVYANRGRAFQDKGEYDRAIAD 490

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L+ ++  A       L    E+ +A  ++ +A+QL+  ++ A+      +QD  
Sbjct: 491 YDQALRLNPKDAIALNNRADILRLRHEHDRAIASYDQALQLNPKYVGAYNSRGLAFQDKG 550

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    Q L ++ R+  AY  RG      G+H +AI D +  L ID +++     R
Sbjct: 551 EYDRAIANYDQALQLNPRYITAYINRGDAYRRKGEHARAISDYNQALQIDQNSVIAYNNR 610

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
             C+H  GEY  AI DYD AL ++      F+ +  AF++K
Sbjct: 611 GLCFHEQGEYDRAIIDYDRALQIDPMYSTGFINRGFAFHKK 651



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 136/282 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG A V++G Y  AI  +   L+ +P Y  A  GRG A   + E + AI D+ +A++ 
Sbjct: 302 VNRGDAFVSKGDYDRAIGDYGHALQINPNYAFAYNGRGVALQNKGEYDRAIMDYDQALRL 361

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+  RG A  + GE   AI D ++AL   PN A   + RG+       +N A+E
Sbjct: 362 DPKYVFAFANRGDAFRSKGEHDVAIADYNQALRLSPNYAKAYNGRGLSFQNKAQYNRAIE 421

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++LD    +AY   G AL S GE   A   + KA+ LD      + +  + +QD 
Sbjct: 422 DYEQVIRLDPRFVAAYNNRGFALVSKGEPTLAIADYDKALLLDPKSATVYANRGRAFQDK 481

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+    Q L ++ + + A + R  +L    +H +AI      L ++P  +     
Sbjct: 482 GEYDRAIADYDQALRLNPKDAIALNNRADILRLRHEHDRAIASYDQALQLNPKYVGAYNS 541

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           R   +   GEY  AI +YD AL L    +  ++ +  A+ +K
Sbjct: 542 RGLAFQDKGEYDRAIANYDQALQLNPRYITAYINRGDAYRRK 583



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 4/248 (1%)

Query: 423 TARAFQ----RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
            AR F+     E E AI++F  A++ NP    A+  RG A    G+   AI D   AL+ 
Sbjct: 30  NARGFELQNRGEHEKAIAEFNLALRLNPKLVSAYINRGFAFRNKGDYDRAIADYDHALQI 89

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           +PNS    + RG   +   +++ A+ D +  +KL  +  + Y   GLA  S  EY +A  
Sbjct: 90  DPNSVVAFNNRGDAFYHKGEYDRAIADYNRSIKLSSDKAAVYNNRGLAFFSKEEYDRAIA 149

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
            + +A++LD  +L A  +    ++     ++A+    QVL ID R   +Y+ RGL   G 
Sbjct: 150 DYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQIDPRSVVSYNNRGLAFQGK 209

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
           G++ +A+ D +  L +DP     L  R   +   G+Y  AI++Y+ AL L   S   +  
Sbjct: 210 GEYDRAVADYNQALTLDPGYTIALINRGDVFRIKGQYDSAIENYNQALQLNPKSKIAYNN 269

Query: 659 QCLAFYQK 666
           +   FY K
Sbjct: 270 RGFVFYNK 277



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 145/316 (45%), Gaps = 7/316 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG A  N+G Y  AI+ +D  L+ DP    A   RG A   + E + AI+D+  +I+ 
Sbjct: 64  INRGFAFRNKGDYDRAIADYDHALQIDPNSVVAFNNRGDAFYHKGEYDRAIADYNRSIKL 123

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  RG A  +  E   AI D ++AL  +P        RG       +++ A+ 
Sbjct: 124 SSDKAAVYNNRGLAFFSKEEYDRAIADYNQALRLDPKYLSAALNRGDAFRSKGEYDRAIA 183

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  +++D  +  +Y   GLA    GEY +A   + +A+ LD  +  A  +    ++  
Sbjct: 184 DYNQVLQIDPRSVVSYNNRGLAFQGKGEYDRAVADYNQALTLDPGYTIALINRGDVFRIK 243

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              + A+E   Q L ++ +   AY+ RG + +  G++ +AI D +S L IDP  +  L  
Sbjct: 244 GQYDSAIENYNQALQLNPKSKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVALVN 303

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           R   + + G+Y  AI DY  AL +  +          A+  + +AL    + +     +D
Sbjct: 304 RGDAFVSKGDYDRAIGDYGHALQINPN-------YAFAYNGRGVALQNKGEYDRAIMDYD 356

Query: 685 IDGDIDPLFKEYWCKR 700
               +DP +   +  R
Sbjct: 357 QALRLDPKYVFAFANR 372



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 173/371 (46%), Gaps = 21/371 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    N G++  AI+ F+  L+ +P    A I RG A   + + + AI+D+  A+Q +
Sbjct: 31  ARGFELQNRGEHEKAIAEFNLALRLNPKLVSAYINRGFAFRNKGDYDRAIADYDHALQID 90

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P++  A+  RG A    GE   AI D +++++   + A + + RG+  F  ++++ A+ D
Sbjct: 91  PNSVVAFNNRGDAFYHKGEYDRAIADYNRSIKLSSDKAAVYNNRGLAFFSKEEYDRAIAD 150

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD +  SA    G A  S GEY +A   + + +Q+D   + ++ +    +Q   
Sbjct: 151 YNQALRLDPKYLSAALNRGDAFRSKGEYDRAIADYNQVLQIDPRSVVSYNNRGLAFQGKG 210

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    Q L +D  ++ A   RG +    GQ+  AI++ +  L ++P +      R
Sbjct: 211 EYDRAVADYNQALTLDPGYTIALINRGDVFRIKGQYDSAIENYNQALQLNPKSKIAYNNR 270

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT-ASKINSE 679
              ++  GEY  AI DY++AL ++   +   V +  AF     Y + I  Y  A +IN  
Sbjct: 271 GFVFYNKGEYDRAIADYNSALQIDPRYVVALVNRGDAFVSKGDYDRAIGDYGHALQINPN 330

Query: 680 FCW--------FDIDGDIDPLFKEY-WCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDF 730
           + +            G+ D    +Y    RL PK V     R    R    KG+    D 
Sbjct: 331 YAFAYNGRGVALQNKGEYDRAIMDYDQALRLDPKYVFAFANRGDAFR---SKGE---HDV 384

Query: 731 SVTKQKTALLL 741
           ++     AL L
Sbjct: 385 AIADYNQALRL 395



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 118/231 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+A  ++G+Y  AI+ +DQ L+ +P Y  A I RG A   + E   AISD+ +A+Q +
Sbjct: 541 SRGLAFQDKGEYDRAIANYDQALQLNPRYITAYINRGDAYRRKGEHARAISDYNQALQID 600

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            ++  A+  RG      GE   AI D  +AL+ +P  +     RG    K  +++ A+ D
Sbjct: 601 QNSVIAYNNRGLCFHEQGEYDRAIIDYDRALQIDPMYSTGFINRGFAFHKKGEYDRAIAD 660

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++D  + +AY   G    + GEY  A   + KAI +  +   ++ H     +   
Sbjct: 661 YDRALQIDPRSATAYNNRGFTFQNRGEYDLAIVDYDKAILIKPDLANSYYHRGTVLRLKG 720

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           + E+++  L + + ++ R+++AY  RGL  H  G+  +A+ D +    + P
Sbjct: 721 DLERSVADLTEAIRLNPRYAEAYQDRGLTFHAKGEADRALADFAEAARLKP 771



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 124/250 (49%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI+ +DQ L+ +P Y  A   RG A   + E + AI+++ +A+Q NP    A+  RG A 
Sbjct: 521 AIASYDQALQLNPKYVGAYNSRGLAFQDKGEYDRAIANYDQALQLNPRYITAYINRGDAY 580

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              GE   AI D ++AL+ + NS    + RG+   +  +++ A+ D    +++D    + 
Sbjct: 581 RRKGEHARAISDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAIIDYDRALQIDPMYSTG 640

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +   G A    GEY +A   + +A+Q+D     A+ +    +Q+    + A+    + + 
Sbjct: 641 FINRGFAFHKKGEYDRAIADYDRALQIDPRSATAYNNRGFTFQNRGEYDLAIVDYDKAIL 700

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I    + +Y+ RG +L   G  ++++ DL+  + ++P   E    R   +HA GE   A+
Sbjct: 701 IKPDLANSYYHRGTVLRLKGDLERSVADLTEAIRLNPRYAEAYQDRGLTFHAKGEADRAL 760

Query: 640 KDYDAALDLE 649
            D+  A  L+
Sbjct: 761 ADFAEAARLK 770



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 142/643 (22%), Positives = 265/643 (41%), Gaps = 60/643 (9%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++ ++++A+R+    L+ +       NR   +     +   I D ++ LQ+DP  + +Y 
Sbjct: 147 AIADYNQALRLDPKYLSAA------LNRGDAFRSKGEYDRAIADYNQVLQIDPRSVVSYN 200

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS----VTCEY 163
            +G AF   G  + A+              AD  Q L L+   T A  +R     +  +Y
Sbjct: 201 NRGLAFQGKGEYDRAV--------------ADYNQALTLDPGYTIALINRGDVFRIKGQY 246

Query: 164 DVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPD---- 219
           D     S++      L  N K S+ + N+      +     R +++  S    DP     
Sbjct: 247 D-----SAIENYNQALQLNPK-SKIAYNNRGFVFYNKGEYDRAIADYNSALQIDPRYVVA 300

Query: 220 LCN-GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSS 278
           L N G +  +KG     +   G  +     +++ N+  + +G     A ++  E +R   
Sbjct: 301 LVNRGDAFVSKGDYDRAIGDYGHAL-----QINPNYAFAYNGRGV--ALQNKGEYDRAIM 353

Query: 279 DDFDICNGPIDK---ASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS- 334
           D +D       K   A  N     ++ G HDV   ++  + +L  S   +++Y+   +S 
Sbjct: 354 D-YDQALRLDPKYVFAFANRGDAFRSKGEHDV--AIADYNQALRLSPNYAKAYNGRGLSF 410

Query: 335 -----DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK-SKSISVDFR---- 384
                 N++ +  E   +L  ++         A  +K      I+   K++ +D +    
Sbjct: 411 QNKAQYNRAIEDYEQVIRLDPRFVAAYNNRGFALVSKGEPTLAIADYDKALLLDPKSATV 470

Query: 385 -LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
             +RG A  ++G+Y  AI+ +DQ L+ +P    AL  R      + E + AI+ + +A+Q
Sbjct: 471 YANRGRAFQDKGEYDRAIADYDQALRLNPKDAIALNNRADILRLRHEHDRAIASYDQALQ 530

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            NP    A+  RG A    GE   AI +  +AL+  P        RG    +  +   A+
Sbjct: 531 LNPKYVGAYNSRGLAFQDKGEYDRAIANYDQALQLNPRYITAYINRGDAYRRKGEHARAI 590

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D +  +++D+ +  AY   GL     GEY +A   + +A+Q+D  +   + +    +  
Sbjct: 591 SDYNQALQIDQNSVIAYNNRGLCFHEQGEYDRAIIDYDRALQIDPMYSTGFINRGFAFHK 650

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
               ++A+    + L ID R + AY+ RG      G++  AI D    + I P      Y
Sbjct: 651 KGEYDRAIADYDRALQIDPRSATAYNNRGFTFQNRGEYDLAIVDYDKAILIKPDLANSYY 710

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            R +     G+   ++ D   A+ L     E +  + L F+ K
Sbjct: 711 HRGTVLRLKGDLERSVADLTEAIRLNPRYAEAYQDRGLTFHAK 753



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 86/174 (49%), Gaps = 6/174 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+    +G+Y  AI  +D+ L+ DPMY    I RG A   + E + AI+D+  A+Q +
Sbjct: 609 NRGLCFHEQGEYDRAIIDYDRALQIDPMYSTGFINRGFAFHKKGEYDRAIADYDRALQID 668

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +  A+  RG      GE   AI D  KA+  +P+ A+  + RG V     D   +V D
Sbjct: 669 PRSATAYNNRGFTFQNRGEYDLAIVDYDKAILIKPDLANSYYHRGTVLRLKGDLERSVAD 728

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKK-----AEEAHLKA-IQLDRNFLEA 553
           L+  ++L+     AY   GL   + GE  +     AE A LK   + D  FL A
Sbjct: 729 LTEAIRLNPRYAEAYQDRGLTFHAKGEADRALADFAEAARLKPEFENDPAFLAA 782



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 2/119 (1%)

Query: 551 LEAWGHLTQFY--QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           L+A GH  + +  Q+    EKA+      L ++ +   AY  RG      G + +AI D 
Sbjct: 24  LDAIGHNARGFELQNRGEHEKAIAEFNLALRLNPKLVSAYINRGFAFRNKGDYDRAIADY 83

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
              L IDP+++     R   ++  GEY  AI DY+ ++ L  D    +  + LAF+ KE
Sbjct: 84  DHALQIDPNSVVAFNNRGDAFYHKGEYDRAIADYNRSIKLSSDKAAVYNNRGLAFFSKE 142



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 63/131 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG A   +G+Y  AI+ +D+ L+ DP    A   RG     + E + AI D+ +AI  
Sbjct: 642 INRGFAFHKKGEYDRAIADYDRALQIDPRSATAYNNRGFTFQNRGEYDLAIVDYDKAILI 701

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    ++  RG      G+   ++ DL++A+   P  A+   +RG+      + + A+ 
Sbjct: 702 KPDLANSYYHRGTVLRLKGDLERSVADLTEAIRLNPRYAEAYQDRGLTFHAKGEADRALA 761

Query: 505 DLSACVKLDKE 515
           D +   +L  E
Sbjct: 762 DFAEAARLKPE 772


>gi|166363102|ref|YP_001655375.1| hypothetical protein MAE_03610 [Microcystis aeruginosa NIES-843]
 gi|166085475|dbj|BAG00183.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
          Length = 1179

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 154/315 (48%), Gaps = 7/315 (2%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG    N  KY  A+S + + +  +P + EA + RG      ++ E A+SD+T+AI  N
Sbjct: 725  NRGNLYKNLQKYELALSDYSKAIDINPKFAEAYVNRGNLYKNLQKYELALSDYTKAIDIN 784

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A+  RG   + L +   A+ D SKA++  PN A   + RG++    + ++ A+ D
Sbjct: 785  PNYAMAYNNRGNLYSDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSD 844

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  + ++     AY   G+  S + +Y  A   + KAI ++ N+ EA+ +    Y++L 
Sbjct: 845  YTKAIDINPNYAEAYVNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQ 904

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              E AL    + + I+  +++AY  RG L   L +++ A+ D S  + I+P++ +  Y R
Sbjct: 905  KYELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYNR 964

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
             + Y+   +Y  A+ DY  A+++  +  +       A+Y +        K       +  
Sbjct: 965  GNLYYNQQKYDLALSDYSKAIEINPNYAK-------AYYNRGNLYKNLQKYELALSDYSK 1017

Query: 686  DGDIDPLFKEYWCKR 700
              DI+P F E +  R
Sbjct: 1018 AIDINPKFAEAYYNR 1032



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 161/327 (49%), Gaps = 10/327 (3%)

Query: 368  FCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
              ++  SK+  I+ ++ ++   RG+   +  KY  A+S + + +  +P Y EA + RG  
Sbjct: 806  LALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSDYTKAIDINPNYAEAYVNRGVL 865

Query: 425  RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
             +  ++ + A+SD+++AI  NP+  EA+  RG     L +   A+ D SKA++  PN A+
Sbjct: 866  YSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNYAE 925

Query: 485  ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
                RG +    + +  A+ D S  + ++  +   Y   G    +  +Y  A   + KAI
Sbjct: 926  AYVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYNRGNLYYNQQKYDLALSDYSKAI 985

Query: 545  QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
            +++ N+ +A+ +    Y++L   E AL    + + I+ +F++AY+ RGLL +   ++  A
Sbjct: 986  EINPNYAKAYYNRGNLYKNLQKYELALSDYSKAIDINPKFAEAYYNRGLLYYNQQKYDLA 1045

Query: 605  IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            + D S  + I+P++      R + Y  + +Y  A+ DY  A+D+  +          A+Y
Sbjct: 1046 LSDFSKAIDINPNDAGAYNNRGNLYSDLQKYELALSDYSKAIDINPNYAN-------AYY 1098

Query: 665  QKEIALYTASKINSEFCWFDIDGDIDP 691
             + +  Y   K +     F    DI+P
Sbjct: 1099 NRGLLYYNQQKYDLALSDFSKAIDINP 1125



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 164/346 (47%), Gaps = 16/346 (4%)

Query: 353  DMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG-------KYASAISIFD 405
            D      N  K  +K+ +     SK+I ++ + +   A VN G       KY  A+S + 
Sbjct: 721  DAYNNRGNLYKNLQKYELALSDYSKAIDINPKFAE--AYVNRGNLYKNLQKYELALSDYT 778

Query: 406  QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
            + +  +P Y  A   RG   +  ++ + A+SD+++AI  NP+   A+  RG   + L + 
Sbjct: 779  KAIDINPNYAMAYNNRGNLYSDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKY 838

Query: 466  VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
              A+ D +KA++  PN A+    RG++    + ++ A+ D S  + ++     AY   G 
Sbjct: 839  DLALSDYTKAIDINPNYAEAYVNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGN 898

Query: 526  ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
               ++ +Y+ A   + KAI ++ N+ EA+ +    Y++L   E AL    + + I+   +
Sbjct: 899  LYKNLQKYELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDA 958

Query: 586  KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            K Y+ RG L +   ++  A+ D S  + I+P+  +  Y R + Y  + +Y  A+ DY  A
Sbjct: 959  KVYYNRGNLYYNQQKYDLALSDYSKAIEINPNYAKAYYNRGNLYKNLQKYELALSDYSKA 1018

Query: 646  LDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
            +D+      KF     A+Y + +  Y   K +     F    DI+P
Sbjct: 1019 IDIN----PKF---AEAYYNRGLLYYNQQKYDLALSDFSKAIDINP 1057



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 143/282 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG   ++  KY  A+S +++ ++ +P + +A   RG      ++ E A+SD+++AI  N
Sbjct: 691 NRGNLYIDLQKYELALSDWNKAIELNPNFADAYNNRGNLYKNLQKYELALSDYSKAIDIN 750

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA+  RG     L +   A+ D +KA++  PN A   + RG +    + ++ A+ D
Sbjct: 751 PKFAEAYVNRGNLYKNLQKYELALSDYTKAIDINPNYAMAYNNRGNLYSDLQKYDLALSD 810

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  + ++     AY   G+  S + +Y  A   + KAI ++ N+ EA+ +    Y DL 
Sbjct: 811 YSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSDYTKAIDINPNYAEAYVNRGVLYSDLQ 870

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             + AL    + + I+  +++AY  RG L   L +++ A+ D S  + I+P+  E    R
Sbjct: 871 KYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNYAEAYVNR 930

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
            + Y  + +Y  A+ DY  A+D+  +  + +  +   +Y ++
Sbjct: 931 GNLYKNLQKYELALSDYSKAIDINPNDAKVYYNRGNLYYNQQ 972



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 141/279 (50%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            ++RG+   +  KY  A+S + + +  +P Y EA + RG      ++ E A+SD+++AI  
Sbjct: 860  VNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDI 919

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            NP+  EA+  RG     L +   A+ D SKA++  PN A + + RG + +  + ++ A+ 
Sbjct: 920  NPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYNRGNLYYNQQKYDLALS 979

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            D S  ++++     AY   G    ++ +Y+ A   + KAI ++  F EA+ +    Y + 
Sbjct: 980  DYSKAIEINPNYAKAYYNRGNLYKNLQKYELALSDYSKAIDINPKFAEAYYNRGLLYYNQ 1039

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               + AL    + + I+   + AY+ RG L   L +++ A+ D S  + I+P+     Y 
Sbjct: 1040 QKYDLALSDFSKAIDINPNDAGAYNNRGNLYSDLQKYELALSDYSKAIDINPNYANAYYN 1099

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            R   Y+   +Y  A+ D+  A+D+  +    +V + + +
Sbjct: 1100 RGLLYYNQQKYDLALSDFSKAIDINPNDAGAYVSRSILY 1138



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 144/301 (47%), Gaps = 7/301 (2%)

Query: 368  FCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
              ++  SK+  I+ ++    ++RG    N  KY  A+S + + +  +P Y EA + RG  
Sbjct: 874  LALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNYAEAYVNRGNL 933

Query: 425  RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
                ++ E A+SD+++AI  NP+  + +  RG       +   A+ D SKA+E  PN A 
Sbjct: 934  YKNLQKYELALSDYSKAIDINPNDAKVYYNRGNLYYNQQKYDLALSDYSKAIEINPNYAK 993

Query: 485  ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
              + RG +    + +  A+ D S  + ++ +   AY   GL   +  +Y  A     KAI
Sbjct: 994  AYYNRGNLYKNLQKYELALSDYSKAIDINPKFAEAYYNRGLLYYNQQKYDLALSDFSKAI 1053

Query: 545  QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
             ++ N   A+ +    Y DL   E AL    + + I+  ++ AY+ RGLL +   ++  A
Sbjct: 1054 DINPNDAGAYNNRGNLYSDLQKYELALSDYSKAIDINPNYANAYYNRGLLYYNQQKYDLA 1113

Query: 605  IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD--AALDLELDSMEKF--VLQC 660
            + D S  + I+P++      R+  Y  +G+  +   D    A L L+ ++M  +  V+Q 
Sbjct: 1114 LSDFSKAIDINPNDAGAYVSRSILYAILGQPEKVKIDLQQAAILFLQQNNMAAYEKVMQI 1173

Query: 661  L 661
            L
Sbjct: 1174 L 1174



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 3/277 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF  S G  +     Y  A+++ +Q +   P  P     +       +  +  ++  T+A
Sbjct: 620 DFSTSAGREREARENYEQALTVINQAISLLPNNPNYYNEKWAVLDKLKRYDEGLAAITQA 679

Query: 442 IQSNPSAGEAW-KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           I   P A  AW   RG     L +   A+ D +KA+E  PN AD  + RG +    + + 
Sbjct: 680 IDLAPRA--AWYSNRGNLYIDLQKYELALSDWNKAIELNPNFADAYNNRGNLYKNLQKYE 737

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+ D S  + ++ +   AY   G    ++ +Y+ A   + KAI ++ N+  A+ +    
Sbjct: 738 LALSDYSKAIDINPKFAEAYVNRGNLYKNLQKYELALSDYTKAIDINPNYAMAYNNRGNL 797

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y DL   + AL    + + I+  ++ AY+ RG+L   L ++  A+ D +  + I+P+  E
Sbjct: 798 YSDLQKYDLALSDYSKAIDINPNYAMAYNNRGVLYSDLQKYDLALSDYTKAIDINPNYAE 857

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
               R   Y  + +Y  A+ DY  A+D+  +  E +V
Sbjct: 858 AYVNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYV 894



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 122/245 (49%), Gaps = 3/245 (1%)

Query: 367  KFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
            +  ++  SK+  I+ ++    ++RG    N  KY  A+S + + +  +P   +    RG 
Sbjct: 907  ELALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYELALSDYSKAIDINPNDAKVYYNRGN 966

Query: 424  ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
                Q++ + A+SD+++AI+ NP+  +A+  RG     L +   A+ D SKA++  P  A
Sbjct: 967  LYYNQQKYDLALSDYSKAIEINPNYAKAYYNRGNLYKNLQKYELALSDYSKAIDINPKFA 1026

Query: 484  DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
            +  + RG++ +  + ++ A+ D S  + ++  +  AY   G   S + +Y+ A   + KA
Sbjct: 1027 EAYYNRGLLYYNQQKYDLALSDFSKAIDINPNDAGAYNNRGNLYSDLQKYELALSDYSKA 1086

Query: 544  IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
            I ++ N+  A+ +    Y +    + AL    + + I+   + AY  R +L   LGQ +K
Sbjct: 1087 IDINPNYANAYYNRGLLYYNQQKYDLALSDFSKAIDINPNDAGAYVSRSILYAILGQPEK 1146

Query: 604  AIKDL 608
               DL
Sbjct: 1147 VKIDL 1151



 Score = 44.7 bits (104), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 25/124 (20%)

Query: 23  IDELVRVDSVMASAITARIELAKLCS------------------LRNWSKAIRILDSLLA 64
           +D+L R D  +A AIT  I+LA   +                  L +W+KAI  L+   A
Sbjct: 663 LDKLKRYDEGLA-AITQAIDLAPRAAWYSNRGNLYIDLQKYELALSDWNKAIE-LNPNFA 720

Query: 65  QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
            +Y      NR   Y  L+ ++  + D  KA+ ++P   +AY+ +G  +  L + E ALS
Sbjct: 721 DAYN-----NRGNLYKNLQKYELALSDYSKAIDINPKFAEAYVNRGNLYKNLQKYELALS 775

Query: 125 VWEK 128
            + K
Sbjct: 776 DYTK 779



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 12/109 (11%)

Query: 47  CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
            +L ++SKAI I +   A +Y      NR   YS L+ +   + D  KA+ ++P   +AY
Sbjct: 806 LALSDYSKAIDI-NPNYAMAYN-----NRGVLYSDLQKYDLALSDYTKAIDINPNYAEAY 859

Query: 107 ILKGCAFSALGRKEEALSVWEKG------YEHALHQSADLKQFLELEEL 149
           + +G  +S L + + ALS + K       Y  A     +L + L+  EL
Sbjct: 860 VNRGVLYSDLQKYDLALSDYSKAIDINPNYAEAYVNRGNLYKNLQKYEL 908


>gi|330507774|ref|YP_004384202.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328928582|gb|AEB68384.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 432

 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 145/306 (47%), Gaps = 7/306 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  AI  +DQ +  DP Y  A   +G A     + + AI+   +AI  NP    AW  
Sbjct: 77  GRYDEAIQAYDQAISIDPQYAYAWSNKGEALRALGKYDEAINACDQAISINPQDAFAWTI 136

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   LG+  EAI    +A+  +P  A     +G        ++ A++     + +D 
Sbjct: 137 KGNALYDLGKYDEAINAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDP 196

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +N  A+   G  L  +G+Y +A +   +AI +D  F EAW +       L   ++A++  
Sbjct: 197 QNAYAWYNKGTVLGILGKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKAC 256

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + ID + ++ + ++G+ L+ LG++ +AI+     + I+P   E  Y +     A+G+
Sbjct: 257 DQAISIDPQLAETWTIKGIALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGK 316

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFK 694
           Y EAIK  D A  + ++  + F     A+  K IALY   K +     +D    I+P F 
Sbjct: 317 YDEAIKACDQA--ISINPQDAF-----AWTIKGIALYDLGKYDEAIQAYDQANRINPQFA 369

Query: 695 EYWCKR 700
           E W  +
Sbjct: 370 EAWYNK 375



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 142/287 (49%), Gaps = 5/287 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A  + GKY  AI+ +DQ +  DP Y  A   +GTA     + + AI    +AI  +P
Sbjct: 137 KGNALYDLGKYDEAINAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDP 196

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  +G     LG+  EAI+   +A+  +P  A+  + +G    +   ++ A++  
Sbjct: 197 QNAYAWYNKGTVLGILGKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKAC 256

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + +D +    +T  G+AL  +G+Y +A +A+ +AI ++    EAW +       L  
Sbjct: 257 DQAISIDPQLAETWTIKGIALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGK 316

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++A++   Q + I+ + + A+ ++G+ L+ LG++ +AI+       I+P   E  Y + 
Sbjct: 317 YDEAIKACDQAISINPQDAFAWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKG 376

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEI 668
               A+G+Y EAIK  D A+ +     E +     VL+ L  Y + I
Sbjct: 377 VALTALGKYDEAIKACDQAISINPQFAEAWYNKGVVLKALGKYDEAI 423



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 139/272 (51%), Gaps = 5/272 (1%)

Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           ++IS+D + +     +G A  + GKY  AI   DQ +  DP    A   +GT      + 
Sbjct: 156 QAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDPQNAYAWYNKGTVLGILGKY 215

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AI  F +AI  +P   EAW  +G A   LG+  EAI+   +A+  +P  A+    +GI
Sbjct: 216 DEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWTIKGI 275

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             +    ++ A++     + ++ +   A+   G+AL+++G+Y +A +A  +AI ++    
Sbjct: 276 ALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAISINPQDA 335

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            AW        DL   ++A++   Q   I+ +F++A++ +G+ L  LG++ +AIK     
Sbjct: 336 FAWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKGVALTALGKYDEAIKACDQA 395

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           + I+P   E  Y +     A+G+Y EAIK ++
Sbjct: 396 ISINPQFAEAWYNKGVVLKALGKYDEAIKAFE 427



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 117/217 (53%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  AI  FDQ +  DP + EA   +GTA     + + AI    +AI  +P   E W  
Sbjct: 213 GKYDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWTI 272

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   LG+  EAIQ   +A+   P  A+  + +G+       ++ A++     + ++ 
Sbjct: 273 KGIALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKYDEAIKACDQAISINP 332

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           ++  A+T  G+AL  +G+Y +A +A+ +A +++  F EAW +       L   ++A++  
Sbjct: 333 QDAFAWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKGVALTALGKYDEAIKAC 392

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            Q + I+ +F++A++ +G++L  LG++ +AIK   SG
Sbjct: 393 DQAISINPQFAEAWYNKGVVLKALGKYDEAIKAFESG 429



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 7/246 (2%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W  +G A   L    EAIQ   +A+  +P  A     +G        ++ A++     + 
Sbjct: 32  WLEKGNAFVMLSMYDEAIQAYDQAISIDPQDAYAWSNKGEALRALGRYDEAIQAYDQAIS 91

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           +D +   A++  G AL ++G+Y +A  A  +AI ++     AW        DL   ++A+
Sbjct: 92  IDPQYAYAWSNKGEALRALGKYDEAINACDQAISINPQDAFAWTIKGNALYDLGKYDEAI 151

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               Q + ID +++ A+  +G  L  LG++ +AIK     + IDP N    Y + +    
Sbjct: 152 NAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDPQNAYAWYNKGTVLGI 211

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +G+Y EAIK +D A+ ++    E       A+Y K  AL    K +      D    IDP
Sbjct: 212 LGKYDEAIKPFDQAISIDPQFAE-------AWYNKGTALGRLGKYDEAIKACDQAISIDP 264

Query: 692 LFKEYW 697
              E W
Sbjct: 265 QLAETW 270



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 13/126 (10%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL------LAQS 66
           L K  + I   D+ + ++   A A T  I+   L  L  + +AI+  D         A++
Sbjct: 314 LGKYDEAIKACDQAISINPQDAFAWT--IKGIALYDLGKYDEAIQAYDQANRINPQFAEA 371

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
           +      N+    + L  +   I+ CD+A+ ++P   +A+  KG    ALG+ +EA+  +
Sbjct: 372 W-----YNKGVALTALGKYDEAIKACDQAISINPQFAEAWYNKGVVLKALGKYDEAIKAF 426

Query: 127 EKGYEH 132
           E GY+H
Sbjct: 427 ESGYQH 432



 Score = 47.0 bits (110), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 3/118 (2%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
           RL K  + I   D+ + +D  +A   T  I+   L  L  + +AI+  D  ++ + +I +
Sbjct: 245 RLGKYDEAIKACDQAISIDPQLAETWT--IKGIALYDLGKYDEAIQAYDQAISINPQIAE 302

Query: 72  IC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
              N+    + L  +   I+ CD+A+ ++P    A+ +KG A   LG+ +EA+  +++
Sbjct: 303 AWYNKGVALTALGKYDEAIKACDQAISINPQDAFAWTIKGIALYDLGKYDEAIQAYDQ 360



 Score = 43.1 bits (100), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 3/118 (2%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
            L K  + I   D+ + +D   A A   +  +  L  L  + +AI+  D  ++   +  +
Sbjct: 177 HLGKYDEAIKACDQAISIDPQNAYAWYNKGTV--LGILGKYDEAIKPFDQAISIDPQFAE 234

Query: 72  IC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
              N+     +L  +   I+ CD+A+ +DP L + + +KG A   LG+ +EA+  +++
Sbjct: 235 AWYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWTIKGIALYDLGKYDEAIQAYDQ 292


>gi|113477431|ref|YP_723492.1| hypothetical protein Tery_3996 [Trichodesmium erythraeum IMS101]
 gi|110168479|gb|ABG53019.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 1694

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 143/648 (22%), Positives = 275/648 (42%), Gaps = 52/648 (8%)

Query: 80   SQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA--LHQS 137
              LE ++  +   +KAL++ P   +A+ LKG A   L R EEA++ +EK  E     H++
Sbjct: 373  GNLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAYEKALEIKPDFHEA 432

Query: 138  ADLK-----QFLELEELLTAAKQDRSVTCEYDVS-----NSMSSLTVSESGLNANDKMSE 187
              LK          EE + A ++   +  ++  +     N++ +L   E  + A +K  E
Sbjct: 433  WFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALE 492

Query: 188  TSENHN-----KSDICDSSSQSRDVSETCSKS------SHDPDLCNGRS--DEAKGGSSV 234
               + +     K +   +  +  +      K+       HD     G +  +  +   +V
Sbjct: 493  IKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAV 552

Query: 235  PVSKSGLHINGKLRE---VSENHNGSSDG-SKSTHASRDASEINRQSSDDFDICNGPIDK 290
               +  L I     E   +  N  G+ +   ++  A   A EI     + + +    +  
Sbjct: 553  AAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGN 612

Query: 291  ASVNER----HGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRS 346
                E     + +      D HD       +L     N E Y ++  +  K+    E + 
Sbjct: 613  LERYEEAVAAYEKALEIKPDFHDAWFLKGNALG----NLERYEEAVAAYEKA---LEIKP 665

Query: 347  KLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISI 403
               + W +        +R ++  V    K+  I  DF  +   +GIA     +Y  A++ 
Sbjct: 666  DFHYAWFLKGNALGNLERYEE-AVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAA 724

Query: 404  FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            F++ L+  P + EA   +G A       E A++ F +A++  P   EAW  +G A   L 
Sbjct: 725  FEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLE 784

Query: 464  ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
               EA+    KALE +P+  +  + +GI   K + +  AV      +++  +   A+   
Sbjct: 785  RYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLK 844

Query: 524  GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
            G AL ++  Y++A  A+ KA+++  +F EAW +     ++L   E+A+   ++ L I   
Sbjct: 845  GNALGNLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPD 904

Query: 584  FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            F +A++ +G+ L  L ++++A+      L I P   E  + + +    +  Y EA+  Y+
Sbjct: 905  FHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYE 964

Query: 644  AALDLELDSMEKFVLQCLAF-----YQKEIALY-TASKINSEF--CWF 683
             AL+++ D    + L+ +A      Y++ +A Y  A +I  +F   WF
Sbjct: 965  KALEIKPDFHYAWFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWF 1012



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 143/660 (21%), Positives = 272/660 (41%), Gaps = 51/660 (7%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
           N+      LE ++  +   +KAL++ P   +A+ LKG A   L R EEA++ +EK  E  
Sbjct: 265 NKGSALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIK 324

Query: 134 --LHQSADLKQF----LE-LEELLTAAKQDRSVTCEYDVS-----NSMSSLTVSESGLNA 181
              H++  LK      LE  EE + A ++   +  ++  +     N++ +L   E  + A
Sbjct: 325 PDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAA 384

Query: 182 NDKMSETSENHNKS------DICDSSSQSRDVSETCSKSSHDPDL-------CNGRSDEA 228
            +K  E   + +++       + +       V+         PD         N   +  
Sbjct: 385 YEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLE 444

Query: 229 KGGSSVPVSKSGLHINGKLRE---VSENHNGSSDG-SKSTHASRDASEINRQSSDDFDIC 284
           +   +V   +  L I     E   +  N  G+ +   ++  A   A EI     D + + 
Sbjct: 445 RYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWFLK 504

Query: 285 NGPIDKASVNER----HGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSD 340
              +      E     + +      D HD       +L     N E Y ++  +  K+  
Sbjct: 505 GNALGNLERYEEAVAAYEKALEIKPDFHDAWFLKGNALG----NLERYEEAVAAYEKA-- 558

Query: 341 STESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKY 397
             E +      W +        +R ++  V    K+  I  DF      +G A  N  +Y
Sbjct: 559 -LEIKPDFHEAWFLKGNALGNLERYEE-AVAAYEKALEIKPDFHEAWFLKGNALGNLERY 616

Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
             A++ +++ L+  P + +A   +G A       E A++ + +A++  P    AW  +G 
Sbjct: 617 EEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHYAWFLKGN 676

Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
           A   L    EA+    KALE +P+  +  + +GI   K + +  AV      +++  +  
Sbjct: 677 ALGNLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFH 736

Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
            A+   G+AL  +  Y++A  A  KA+++  +F EAW +     + L   E+A+   ++ 
Sbjct: 737 EAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKA 796

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
           L I   F +A++ +G+ L  L ++++A+      L I P   +  +L+ +    +  Y E
Sbjct: 797 LEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEE 856

Query: 638 AIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYW 697
           A+  Y+ AL+++ D  E       A++ K IAL    +       ++   +I P F E W
Sbjct: 857 AVAAYEKALEIKPDFHE-------AWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAW 909



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 132/621 (21%), Positives = 255/621 (41%), Gaps = 56/621 (9%)

Query: 75   RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
            +     +LE ++  +   +KAL++ P   +A+ LKG A   L R EEA++ +EK      
Sbjct: 980  KGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKA----- 1034

Query: 135  HQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK 194
                     LE++     A  ++ +  E ++     ++   E  L       E    HNK
Sbjct: 1035 ---------LEIKPDFHEAWHNKGIALE-NLERYEEAVAAYEKALEIKPDFHEAW--HNK 1082

Query: 195  SDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSEN 253
                ++  +  +      K+    PD      ++     ++   +  +    K  E+  +
Sbjct: 1083 GIALENLERYEEAVAAYEKALEIKPDYHYAWHNKGDALENLERYEEAVAAYEKALEIKPD 1142

Query: 254  HNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSS 313
            ++ + +G            I     + ++      +KA              D HD    
Sbjct: 1143 YHYAWNGKG----------IALIKLERYEEAVAAFEKA---------LEIKPDFHDAWFL 1183

Query: 314  DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRI 373
               +L     N E Y ++  +  K+    E +      W+  K  + E     +  V   
Sbjct: 1184 KGNALG----NLERYEEAVAAFEKA---LEIKPDFHEAWNN-KGIALEKLERYEEAVAAF 1235

Query: 374  SKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
             K+  I  DF  +   +G A +   +Y  A++ +++ L+  P + +A   +G A      
Sbjct: 1236 EKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKALEIKPDFHDAWFLKGNALIKLER 1295

Query: 431  LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
             E A++ + +A++  P   EAW  +G A   L    EA+    KALE +P+  +    +G
Sbjct: 1296 YEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKG 1355

Query: 491  IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
                K + +  AV      +++  +   A+   G AL ++  Y++A  A+ KA+++  +F
Sbjct: 1356 NALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDF 1415

Query: 551  LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             EAW +       L   E+A+   ++ L I   F +A+H +G  L  L ++++A+     
Sbjct: 1416 HEAWHNKGIALGKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEK 1475

Query: 611  GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQ 665
             L I P   E  +L+ +    +  Y EA+  Y+ AL+++ D  E + L+  A      Y+
Sbjct: 1476 ALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYE 1535

Query: 666  KEIALY-TASKINSEF--CWF 683
            + +A Y  A +I  +F   WF
Sbjct: 1536 EAVAAYEKALEIKPDFHEAWF 1556



 Score =  112 bits (281), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 10/332 (3%)

Query: 369  CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
             V    K+  I  DF  +   +GIA     +Y  A++ F++ L+  P + EA   +G A 
Sbjct: 755  AVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIAL 814

Query: 426  AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                  E A++ F +A++  P   +AW  +G A   L    EA+    KALE +P+  + 
Sbjct: 815  EKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEA 874

Query: 486  LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
             H +GI     + +  AV      +++  +   A+   G+AL  +  Y++A  A  KA++
Sbjct: 875  WHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALE 934

Query: 546  LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
            +  +F EAW +      +L   E+A+   ++ L I   F  A+ L+G+ L  L ++++A+
Sbjct: 935  IKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYAWFLKGIALGKLERYEEAV 994

Query: 606  KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                  L I P   E  +L+      +  Y EA+  Y+ AL+++ D  E       A++ 
Sbjct: 995  AAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALEIKPDFHE-------AWHN 1047

Query: 666  KEIALYTASKINSEFCWFDIDGDIDPLFKEYW 697
            K IAL    +       ++   +I P F E W
Sbjct: 1048 KGIALENLERYEEAVAAYEKALEIKPDFHEAW 1079



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 139/654 (21%), Positives = 263/654 (40%), Gaps = 52/654 (7%)

Query: 74   NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
            N+     +LE ++  +   +KAL++ P   +A+  KG A   L R EEA++ +EK  E  
Sbjct: 741  NKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIK 800

Query: 134  --LHQSAD-----LKQFLELEELLTAAKQDRSVTCEYDVS-----NSMSSLTVSESGLNA 181
               H++ +     L++    EE + A ++   +  ++  +     N++ +L   E  + A
Sbjct: 801  PDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAA 860

Query: 182  NDKMSETSEN-----HNKSDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEA------- 228
             +K  E   +     HNK    ++  +  +      K+    PD     +++        
Sbjct: 861  YEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIALEKLE 920

Query: 229  KGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFD------ 282
            +   +V   +  L I     E   N   +    +    +  A E   +   DF       
Sbjct: 921  RYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYAWFLK 980

Query: 283  -ICNGPIDK-ASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSD 340
             I  G +++       + +      D H+       +L       E+ +    +     D
Sbjct: 981  GIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALEIKPD 1040

Query: 341  STESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKY 397
              E+        + L+             V    K+  I  DF  +   +GIA  N  +Y
Sbjct: 1041 FHEAWHNKGIALENLERYEE--------AVAAYEKALEIKPDFHEAWHNKGIALENLERY 1092

Query: 398  ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
              A++ +++ L+  P Y  A   +G A       E A++ + +A++  P    AW  +G 
Sbjct: 1093 EEAVAAYEKALEIKPDYHYAWHNKGDALENLERYEEAVAAYEKALEIKPDYHYAWNGKGI 1152

Query: 458  ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
            A   L    EA+    KALE +P+  D    +G      + +  AV      +++  +  
Sbjct: 1153 ALIKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAFEKALEIKPDFH 1212

Query: 518  SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
             A+   G+AL  +  Y++A  A  KA+++  +F EAW +       L   E+A+   ++ 
Sbjct: 1213 EAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALIKLERYEEAVAAYEKA 1272

Query: 578  LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
            L I   F  A+ L+G  L  L ++++A+      L I P   E  +L+ +    +  Y E
Sbjct: 1273 LEIKPDFHDAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEE 1332

Query: 638  AIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY-TASKINSEF--CWF 683
            A+  Y+ AL+++ D  E + L+  A      Y++ +A Y  A +I  +F   WF
Sbjct: 1333 AVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWF 1386



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 152/321 (47%), Gaps = 9/321 (2%)

Query: 369  CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
             V    K+  I  DF  +   +GIA     +Y  A++ F++ L+  P + EA   +G A 
Sbjct: 721  AVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWNNKGIAL 780

Query: 426  AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                  E A++ F +A++  P   EAW  +G A   L    EA+    KALE +P+  D 
Sbjct: 781  EKLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHDA 840

Query: 486  LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
               +G      + +  AV      +++  +   A+   G+AL ++  Y++A  A+ KA++
Sbjct: 841  WFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALE 900

Query: 546  LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
            +  +F EAW +     + L   E+A+   ++ L I   F +A+H +G  L  L ++++A+
Sbjct: 901  IKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAV 960

Query: 606  KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-- 663
                  L I P      +L+      +  Y EA+  Y+ AL+++ D  E + L+ +A   
Sbjct: 961  AAYEKALEIKPDFHYAWFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGK 1020

Query: 664  ---YQKEIALY-TASKINSEF 680
               Y++ +A Y  A +I  +F
Sbjct: 1021 LERYEEAVAAYEKALEIKPDF 1041



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 152/332 (45%), Gaps = 10/332 (3%)

Query: 369  CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
             V    K+  I  DF  +   +GIA  N  +Y  A++ +++ L+  P + EA   +G A 
Sbjct: 857  AVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWNNKGIAL 916

Query: 426  AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                  E A++ F +A++  P   EAW  +G A   L    EA+    KALE +P+    
Sbjct: 917  EKLERYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYA 976

Query: 486  LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
               +GI   K + +  AV      +++  +   A+   G+AL  +  Y++A  A+ KA++
Sbjct: 977  WFLKGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALE 1036

Query: 546  LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
            +  +F EAW +     ++L   E+A+   ++ L I   F +A+H +G+ L  L ++++A+
Sbjct: 1037 IKPDFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAV 1096

Query: 606  KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                  L I P      + +      +  Y EA+  Y+ AL+++ D          A+  
Sbjct: 1097 AAYEKALEIKPDYHYAWHNKGDALENLERYEEAVAAYEKALEIKPDYH-------YAWNG 1149

Query: 666  KEIALYTASKINSEFCWFDIDGDIDPLFKEYW 697
            K IAL    +       F+   +I P F + W
Sbjct: 1150 KGIALIKLERYEEAVAAFEKALEIKPDFHDAW 1181



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 132/637 (20%), Positives = 254/637 (39%), Gaps = 51/637 (8%)

Query: 80   SQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
              LE ++  +   +KAL++ P    A+ LKG A   L R EEA++     +E AL    D
Sbjct: 645  GNLERYEEAVAAYEKALEIKPDFHYAWFLKGNALGNLERYEEAVA----AFEKALEIKPD 700

Query: 140  LKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICD 199
              +          A  ++ +  E  +     ++   E  L       E    +NK    +
Sbjct: 701  FHE----------AWNNKGIALE-KLERYEEAVAAFEKALEIKPDFHEAW--NNKGIALE 747

Query: 200  SSSQSRDVSETCSKSSH-DPDLCNGRSDEA-------KGGSSVPVSKSGLHINGKLREVS 251
               +  +      K+    PD     +++        +   +V   +  L I     E  
Sbjct: 748  KLERYEEAVAAFEKALEIKPDFHEAWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAW 807

Query: 252  ENHNGSSDG----SKSTHASRDASEINRQSSDDFDICNGPIDKASVNER----HGRQTNG 303
             N   + +      ++  A   A EI     D + +    +      E     + +    
Sbjct: 808  NNKGIALEKLERYEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEI 867

Query: 304  THDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAK 363
              D H+   +   +L     N E Y ++  +  K+    E +      W+  K  + E  
Sbjct: 868  KPDFHEAWHNKGIALE----NLERYEEAVAAYEKA---LEIKPDFHEAWNN-KGIALEKL 919

Query: 364  RNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
               +  V    K+  I  DF  +   +G A  N  +Y  A++ +++ L+  P +  A   
Sbjct: 920  ERYEEAVAAFEKALEIKPDFHEAWHNKGNALGNLERYEEAVAAYEKALEIKPDFHYAWFL 979

Query: 421  RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
            +G A       E A++ + +A++  P   EAW  +G A   L    EA+    KALE +P
Sbjct: 980  KGIALGKLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGKLERYEEAVAAYEKALEIKP 1039

Query: 481  NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            +  +  H +GI     + +  AV      +++  +   A+   G+AL ++  Y++A  A+
Sbjct: 1040 DFHEAWHNKGIALENLERYEEAVAAYEKALEIKPDFHEAWHNKGIALENLERYEEAVAAY 1099

Query: 541  LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
             KA+++  ++  AW +     ++L   E+A+   ++ L I   +  A++ +G+ L  L +
Sbjct: 1100 EKALEIKPDYHYAWHNKGDALENLERYEEAVAAYEKALEIKPDYHYAWNGKGIALIKLER 1159

Query: 601  HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
            +++A+      L I P   +  +L+ +    +  Y EA+  ++ AL+++ D  E      
Sbjct: 1160 YEEAVAAFEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAFEKALEIKPDFHE------ 1213

Query: 661  LAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYW 697
             A+  K IAL    +       F+   +I P F E W
Sbjct: 1214 -AWNNKGIALEKLERYEEAVAAFEKALEIKPDFHEAW 1249



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 143/300 (47%), Gaps = 22/300 (7%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
            AI   D+ LK +P    A   +G+A       E A++ + +A++  P   EAW  +G A
Sbjct: 244 EAILTCDEALKIEPNDYNAWNNKGSALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIA 303

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
              L    EA+    KALE +P+  +    +GI     + +  AV      +++  +   
Sbjct: 304 LINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFHE 363

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKAL 571
           A+   G AL ++  Y++A  A+ KA+++  +F EAW       G+L ++ + +A  EKAL
Sbjct: 364 AWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGIALGNLERYEEAVAAYEKAL 423

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           E       I   F +A+ L+G  L  L ++++A+      L I P   E  +L+ +    
Sbjct: 424 E-------IKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALGN 476

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY-TASKINSEF--CWF 683
           +  Y EA+  Y+ AL+++ D  + + L+  A      Y++ +A Y  A +I  +F   WF
Sbjct: 477 LERYEEAVAAYEKALEIKPDFHDAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHDAWF 536



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 130/267 (48%), Gaps = 22/267 (8%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI    EA++  P+   AW  +G A   L    EA+    KALE +P+  +    +GI
Sbjct: 243 EEAILTCDEALKIEPNDYNAWNNKGSALINLERYEEAVAAYEKALEIKPDFHEAWFLKGI 302

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                + +  AV      +++  +   A+   G+AL ++  Y++A  A+ KA+++  +F 
Sbjct: 303 ALINLERYEEAVAAYEKALEIKPDFHEAWFLKGIALINLERYEEAVAAYEKALEIKPDFH 362

Query: 552 EAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           EAW       G+L ++ + +A  EKALE       I   F +A+ L+G+ L  L ++++A
Sbjct: 363 EAWFLKGNALGNLERYEEAVAAYEKALE-------IKPDFHEAWFLKGIALGNLERYEEA 415

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF- 663
           +      L I P   E  +L+ +    +  Y EA+  Y+ AL+++ D  E + L+  A  
Sbjct: 416 VAAYEKALEIKPDFHEAWFLKGNALGNLERYEEAVAAYEKALEIKPDFHEAWFLKGNALG 475

Query: 664 ----YQKEIALY-TASKINSEF--CWF 683
               Y++ +A Y  A +I  +F   WF
Sbjct: 476 NLERYEEAVAAYEKALEIKPDFHDAWF 502



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 3/181 (1%)

Query: 369  CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
             V    K+  I  DF  +   +GIA     +Y  A++ F++ L+  P + EA   +G A 
Sbjct: 1401 AVAAYEKALEIKPDFHEAWHNKGIALGKLERYEEAVAAFEKALEIKPDFHEAWHNKGNAL 1460

Query: 426  AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                  E A++ + +A++  P   EAW  +G A   L    EA+    KALE +P+  + 
Sbjct: 1461 IKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEA 1520

Query: 486  LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
               +G    K + +  AV      +++  +   A+   G AL  +  Y++A  A+ KA++
Sbjct: 1521 WFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALE 1580

Query: 546  L 546
            +
Sbjct: 1581 I 1581



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 3/166 (1%)

Query: 369  CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
             V    K+  I  DF      +G A +   +Y  A++ +++ L+  P + EA   +G A 
Sbjct: 1469 AVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDFHEAWFLKGNAL 1528

Query: 426  AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                  E A++ + +A++  P   EAW  +G A   L    EA+    KALE +P+    
Sbjct: 1529 IKLERYEEAVAAYEKALEIKPDFHEAWFLKGNALIKLERYEEAVAAYEKALEIKPDDEYS 1588

Query: 486  LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            +   G+V ++    + A+E+  A  +++ +       +G+AL   G
Sbjct: 1589 IINLGLVKYEMGFIDQAIENWQAATEINNQLVEPKLAIGVALYKKG 1634


>gi|440680211|ref|YP_007155006.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428677330|gb|AFZ56096.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 560

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 139/287 (48%), Gaps = 5/287 (1%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +++IS++  L+     RG A+   G    AI   +Q L+ +P   EA   R  AR    +
Sbjct: 190 NQAISINPNLAEAYCNRGNARCEAGDVQGAIEDCNQALRINPKLAEAYCNRSNARCESGD 249

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           +E AI D  +A++ NP   EA+  RG AR   G+   AI+D ++ L   PN A     RG
Sbjct: 250 VEGAIEDCNQALRINPKLAEAYLNRGNARRESGDIKRAIEDYNQGLRINPNLAQAYRNRG 309

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
               +  DF  A+ED +  ++++     AY   G A    G++K A E   +A++++ N+
Sbjct: 310 FARCESGDFKGAIEDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIEDFNQALRINPNY 369

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            EA+ +    +    + +  +E   Q L I+   ++AY  RG+     G  K AI+D + 
Sbjct: 370 AEAYYNRGLAHNYSGDRQAEIEDFNQALRINPNLAEAYLNRGVTRRESGDVKGAIEDYNQ 429

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
            L I+P+  E    R       G+++ AI+D +  L +  +  E ++
Sbjct: 430 ALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRINPNFAEAYL 476



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 133/263 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R  A+   G    AI   +Q L+ +P   EA + RG AR    +++ AI D+ + ++ N
Sbjct: 239 NRSNARCESGDVEGAIEDCNQALRINPKLAEAYLNRGNARRESGDIKRAIEDYNQGLRIN 298

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +A++ RG AR   G+   AI+D ++A+   PN A     RG    +  DF  A+ED
Sbjct: 299 PNLAQAYRNRGFARCESGDFKGAIEDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIED 358

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++     AY   GLA +  G+ +   E   +A++++ N  EA+ +     ++  
Sbjct: 359 FNQALRINPNYAEAYYNRGLAHNYSGDRQAEIEDFNQALRINPNLAEAYLNRGVTRRESG 418

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+E   Q L+I+   ++AY  RG      G  K AI+D +  L I+P+  E    R
Sbjct: 419 DVKGAIEDYNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRINPNFAEAYLNR 478

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
            +     G+ + AI+D + AL +
Sbjct: 479 GNARLESGDMKGAIEDCNQALRI 501



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 121/233 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG A+   G    AI  ++Q L+ +P   +A   RG AR    + + AI DF +AI+ 
Sbjct: 272 LNRGNARRESGDIKRAIEDYNQGLRINPNLAQAYRNRGFARCESGDFKGAIEDFNQAIRI 331

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+  +A++ RG AR   G+   AI+D ++AL   PN A+  + RG+ +    D  A +E
Sbjct: 332 NPNLAQAYQNRGFARCESGDFKGAIEDFNQALRINPNYAEAYYNRGLAHNYSGDRQAEIE 391

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++++     AY   G+     G+ K A E + +A+ ++ N  EA+ +        
Sbjct: 392 DFNQALRINPNLAEAYLNRGVTRRESGDVKGAIEDYNQALHINPNLAEAYQNRGFARCKS 451

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
            + + A+E   QVL I+  F++AY  RG      G  K AI+D +  L I+P+
Sbjct: 452 GDFKGAIEDCNQVLRINPNFAEAYLNRGNARLESGDMKGAIEDCNQALRINPN 504



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 151/315 (47%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A    G   +A+  + Q L  +P + EA   RG AR+   +++ A+ D+ +A+  N
Sbjct: 103 NQGNACAQSGDMKAAMEYYSQALSINPNFAEAYCNRGNARSKLGDMKGAMEDYNQALSIN 162

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P++ EA+  RG AR   G+    ++D ++A+   PN A+    RG    +  D   A+ED
Sbjct: 163 PNSVEAYLSRGFARLQSGDMNGGMEDYNQAISINPNLAEAYCNRGNARCEAGDVQGAIED 222

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++ +   AY     A    G+ + A E   +A++++    EA+ +     ++  
Sbjct: 223 CNQALRINPKLAEAYCNRSNARCESGDVEGAIEDCNQALRINPKLAEAYLNRGNARRESG 282

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + ++A+E   Q L I+   ++AY  RG      G  K AI+D +  + I+P+  +    R
Sbjct: 283 DIKRAIEDYNQGLRINPNLAQAYRNRGFARCESGDFKGAIEDFNQAIRINPNLAQAYQNR 342

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                  G+++ AI+D++ AL +  +  E       A+Y + +A   +    +E   F+ 
Sbjct: 343 GFARCESGDFKGAIEDFNQALRINPNYAE-------AYYNRGLAHNYSGDRQAEIEDFNQ 395

Query: 686 DGDIDPLFKEYWCKR 700
              I+P   E +  R
Sbjct: 396 ALRINPNLAEAYLNR 410



 Score =  103 bits (256), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 108/223 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+   G +  AI  F+Q ++ +P   +A   RG AR    + + AI DF +A++ N
Sbjct: 307 NRGFARCESGDFKGAIEDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIEDFNQALRIN 366

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+  RG A    G+    I+D ++AL   PN A+    RG+   +  D   A+ED
Sbjct: 367 PNYAEAYYNRGLAHNYSGDRQAEIEDFNQALRINPNLAEAYLNRGVTRRESGDVKGAIED 426

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + ++     AY   G A    G++K A E   + ++++ NF EA+ +      +  
Sbjct: 427 YNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRINPNFAEAYLNRGNARLESG 486

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           + + A+E   Q L I+   + AY  RG         K AI DL
Sbjct: 487 DMKGAIEDCNQALRINPNLAIAYFNRGAARLQSRDKKGAIADL 529



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 63/128 (49%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG+ +   G    AI  ++Q L  +P   EA   RG AR    + + AI D  + ++ 
Sbjct: 408 LNRGVTRRESGDVKGAIEDYNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRI 467

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+  EA+  RG AR   G+   AI+D ++AL   PN A     RG    + +D   A+ 
Sbjct: 468 NPNFAEAYLNRGNARLESGDMKGAIEDCNQALRINPNLAIAYFNRGAARLQSRDKKGAIA 527

Query: 505 DLSACVKL 512
           DL    KL
Sbjct: 528 DLQKASKL 535



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 103/470 (21%), Positives = 190/470 (40%), Gaps = 66/470 (14%)

Query: 52  WSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGC 111
           +S+A+ I +   A++Y     CNR    S+L   K  + D ++AL ++P  ++AY+ +G 
Sbjct: 121 YSQALSI-NPNFAEAY-----CNRGNARSKLGDMKGAMEDYNQALSINPNSVEAYLSRGF 174

Query: 112 AFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDR-SVTCEYDVSNSMS 170
           A    G     +               D  Q + +   L  A  +R +  CE    +   
Sbjct: 175 ARLQSGDMNGGME--------------DYNQAISINPNLAEAYCNRGNARCE--AGDVQG 218

Query: 171 SLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSH-DPDLC-------N 222
           ++      L  N K++E   N + +  C+S      + E C+++   +P L        N
Sbjct: 219 AIEDCNQALRINPKLAEAYCNRSNAR-CESGDVEGAI-EDCNQALRINPKLAEAYLNRGN 276

Query: 223 GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFD 282
            R +      ++     GL IN  L +   N             +R  S   + + +DF+
Sbjct: 277 ARRESGDIKRAIEDYNQGLRINPNLAQAYRNRG----------FARCESGDFKGAIEDFN 326

Query: 283 IC---NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSS 339
                N  + +A  N    R  +G  D    +   + +L  +   +E+Y    ++ N S 
Sbjct: 327 QAIRINPNLAQAYQNRGFARCESG--DFKGAIEDFNQALRINPNYAEAYYNRGLAHNYSG 384

Query: 340 DSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK----------SKSISVDFRLS--- 386
           D        +     L+   N A+      VTR             ++++ ++  L+   
Sbjct: 385 DRQAEIEDFN---QALRINPNLAEAYLNRGVTRRESGDVKGAIEDYNQALHINPNLAEAY 441

Query: 387 --RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG A+   G +  AI   +Q+L+ +P + EA + RG AR    +++ AI D  +A++ 
Sbjct: 442 QNRGFARCKSGDFKGAIEDCNQVLRINPNFAEAYLNRGNARLESGDMKGAIEDCNQALRI 501

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           NP+   A+  RG AR    +   AI DL KA +      +I+  + I++ 
Sbjct: 502 NPNLAIAYFNRGAARLQSRDKKGAIADLQKASKLFQQQGEIVQYQYILDL 551



 Score = 47.0 bits (110), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%)

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G A +  G+ K A E + +A+ ++ NF EA+ +       L + + A+E   Q L 
Sbjct: 101 YYNQGNACAQSGDMKAAMEYYSQALSINPNFAEAYCNRGNARSKLGDMKGAMEDYNQALS 160

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I+    +AY  RG      G     ++D +  + I+P+  E    R +     G+ + AI
Sbjct: 161 INPNSVEAYLSRGFARLQSGDMNGGMEDYNQAISINPNLAEAYCNRGNARCEAGDVQGAI 220

Query: 640 KDYDAALDLELDSMEKF 656
           +D + AL +     E +
Sbjct: 221 EDCNQALRINPKLAEAY 237



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 89/407 (21%), Positives = 158/407 (38%), Gaps = 72/407 (17%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
            + ++++AI I +  LA++Y     CNR     +    +  I DC++AL+++P L +AY 
Sbjct: 185 GMEDYNQAISI-NPNLAEAY-----CNRGNARCEAGDVQGAIEDCNQALRINPKLAEAYC 238

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
            +  A    G  E A+               D  Q L +   L  A  +R      +  +
Sbjct: 239 NRSNARCESGDVEGAIE--------------DCNQALRINPKLAEAYLNRG-NARRESGD 283

Query: 168 SMSSLTVSESGLNANDKMSETSENHNKSDICDSS---------SQSRDVSETCSKSSHDP 218
              ++     GL  N  +++   N   +  C+S          +Q+  ++   +++  + 
Sbjct: 284 IKRAIEDYNQGLRINPNLAQAYRNRGFAR-CESGDFKGAIEDFNQAIRINPNLAQAYQNR 342

Query: 219 DLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSEN----HNGSSDGSKSTHASRDASEIN 274
                 S + KG  ++      L IN    E   N    HN S D          A  IN
Sbjct: 343 GFARCESGDFKG--AIEDFNQALRINPNYAEAYYNRGLAHNYSGDRQAEIEDFNQALRIN 400

Query: 275 RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS 334
                        + +A +N    R+ +G  DV   +   + +L+ +   +E+Y     +
Sbjct: 401 PN-----------LAEAYLNRGVTRRESG--DVKGAIEDYNQALHINPNLAEAYQNRGFA 447

Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNE 394
             KS D         FK  +  E  N+        V RI+ + + +    L+RG A++  
Sbjct: 448 RCKSGD---------FKGAI--EDCNQ--------VLRINPNFAEAY---LNRGNARLES 485

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           G    AI   +Q L+ +P    A   RG AR   R+ + AI+D  +A
Sbjct: 486 GDMKGAIEDCNQALRINPNLAIAYFNRGAARLQSRDKKGAIADLQKA 532


>gi|300869588|ref|ZP_07114169.1| putative Serine/threonine protein kinase with TPR repeats
           [Oscillatoria sp. PCC 6506]
 gi|300332456|emb|CBN59369.1| putative Serine/threonine protein kinase with TPR repeats
           [Oscillatoria sp. PCC 6506]
          Length = 774

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 132/254 (51%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI  + Q ++ DP   +A   RG A     +  +A+ DFT+ I+ NP+  EA+ +
Sbjct: 434 GAYQQAIQDYTQAIQVDPNNVKAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQ 493

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R      LG+   AI+D ++A+   PN A     RG+      D   A+ D +  ++L+ 
Sbjct: 494 RALGYYELGDYKTAIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNP 553

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +  S Y   G A  ++ +YK A E + +AI LD N  +A+ +    Y +LA  +KA+E  
Sbjct: 554 KQASVYYSRGRARFNLADYKGAMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDC 613

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + +D + ++AY+ R +    LG ++KA +D S  +GI  +N +    R     AIG+
Sbjct: 614 TQAIALDPKNAEAYNNRCIARLNLGDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGD 673

Query: 635 YREAIKDYDAALDL 648
            + AI+D+  A+ L
Sbjct: 674 KQGAIEDFSQAIRL 687



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 129/263 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  +     SA+  F Q+++ +P   EA   R        + + AI D+T+AI+ N
Sbjct: 459 NRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYELGDYKTAIEDYTQAIRLN 518

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +++  RG AR+A G+   A+ D ++A+E  P  A + + RG   F   D+  A+ED
Sbjct: 519 PNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRARFNLADYKGAMED 578

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  + LD     AYT    A  ++  Y KA E   +AI LD    EA+ +      +L 
Sbjct: 579 YSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIALDPKNAEAYNNRCIARLNLG 638

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + +KA E     + I     KA+  RGL    +G  + AI+D S  + ++PS+      R
Sbjct: 639 DYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLNPSDAVAYSNR 698

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
              Y  I  Y  AI+D+  ++ L
Sbjct: 699 GIVYSEIKNYGSAIEDFAQSIRL 721



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 128/254 (50%)

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           ++ P   +    R   +A Q +   AI+D+T+AI  N    EA+ +R      LG   +A
Sbjct: 380 RQAPARAKEFYERAVQKAKQGDKAGAIADYTQAIGLNSRDAEAYYKRANTHYDLGAYQQA 439

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           IQD ++A++ +PN+    + RG+     +D  +AV+D +  ++L+  +  AY    L   
Sbjct: 440 IQDYTQAIQVDPNNVKAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYY 499

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+YK A E + +AI+L+ N  +++ +         + + A+    Q + ++ + +  Y
Sbjct: 500 ELGDYKTAIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVY 559

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + RG     L  +K A++D S  + +DP+  +    R S Y  +  Y +AI+D   A+ L
Sbjct: 560 YSRGRARFNLADYKGAMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIAL 619

Query: 649 ELDSMEKFVLQCLA 662
           +  + E +  +C+A
Sbjct: 620 DPKNAEAYNNRCIA 633



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 20/294 (6%)

Query: 361 EAKRNKKFCVTRISKSKSISVDF----RLS---------RGIAQVNEGKYASAISIFDQI 407
           +A  N+    T I   +S   DF    RL+         R +     G Y +AI  + Q 
Sbjct: 455 KAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYELGDYKTAIEDYTQA 514

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           ++ +P   ++   RG AR+   + + A+SDFT+AI+ NP     +  RG+AR  L +   
Sbjct: 515 IRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRARFNLADYKG 574

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           A++D S+A+  +PN AD    R         ++ A+ED +  + LD +N  AY    +A 
Sbjct: 575 AMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIALDPKNAEAYNNRCIAR 634

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
            ++G+Y+KA E     I +  N  +A+ +       + + + A+E   Q + ++   + A
Sbjct: 635 LNLGDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLNPSDAVA 694

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
           Y  RG++   +  +  AI+D +  + + P+N       A+ Y++ G  R  +KD
Sbjct: 695 YSNRGIVYSEIKNYGSAIEDFAQSIRLSPNN-------ATAYYSRGIIRRELKD 741



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 135/276 (48%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R + +  +G  A AI+ + Q +  +    EA   R          + AI D+T+AIQ +P
Sbjct: 392 RAVQKAKQGDKAGAIADYTQAIGLNSRDAEAYYKRANTHYDLGAYQQAIQDYTQAIQVDP 451

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  +A+  RG A   + +   A+QD ++ +   PN A+  ++R +  ++  D+  A+ED 
Sbjct: 452 NNVKAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYELGDYKTAIEDY 511

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++L+  +  +Y+  GLA S+ G+ + A     +AI+L+      +    +   +LA+
Sbjct: 512 TQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSRGRARFNLAD 571

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + A+E   Q + +D   + AY  R      L  + KAI+D +  + +DP N E    R 
Sbjct: 572 YKGAMEDYSQAIVLDPNQADAYTNRCSAYLNLATYDKAIEDCTQAIALDPKNAEAYNNRC 631

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
                +G+Y++A +D    + +  ++ + F  + LA
Sbjct: 632 IARLNLGDYQKASEDCSLTIGITGNNPKAFSNRGLA 667



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 105/218 (48%)

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  + +  R   +A  G+   AI D ++A+      A+  ++R   ++    +  A++D
Sbjct: 383 PARAKEFYERAVQKAKQGDKAGAIADYTQAIGLNSRDAEAYYKRANTHYDLGAYQQAIQD 442

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +++D  N  AY   GLA + I + + A +   + I+L+ N  EA+      Y +L 
Sbjct: 443 YTQAIQVDPNNVKAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYELG 502

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+E   Q + ++   +K+Y  RGL     G  + A+ D +  + ++P      Y R
Sbjct: 503 DYKTAIEDYTQAIRLNPNDAKSYSNRGLARSAAGDKQGAMSDFTQAIELNPKQASVYYSR 562

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
                 + +Y+ A++DY  A+ L+ +  + +  +C A+
Sbjct: 563 GRARFNLADYKGAMEDYSQAIVLDPNQADAYTNRCSAY 600



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 66/137 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R IA++N G Y  A       +      P+A   RG AR+   + + AI DF++AI+ N
Sbjct: 629 NRCIARLNLGDYQKASEDCSLTIGITGNNPKAFSNRGLARSAIGDKQGAIEDFSQAIRLN 688

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           PS   A+  RG   + +     AI+D ++++   PN+A   + RGI+  + KD   A ED
Sbjct: 689 PSDAVAYSNRGIVYSEIKNYGSAIEDFAQSIRLSPNNATAYYSRGIIRRELKDRLGANED 748

Query: 506 LSACVKLDKENKSAYTY 522
                 L  E   A  Y
Sbjct: 749 FQKAATLFLEQGRADAY 765



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 6/120 (5%)

Query: 552 EAWGHLTQFYQDLANSEK------ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +A     +FY+      K      A+    Q + ++ R ++AY+ R    + LG +++AI
Sbjct: 381 QAPARAKEFYERAVQKAKQGDKAGAIADYTQAIGLNSRDAEAYYKRANTHYDLGAYQQAI 440

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           +D +  + +DP+N++  Y R   Y  I + R A++D+   + L  +  E +  + L +Y+
Sbjct: 441 QDYTQAIQVDPNNVKAYYNRGLAYTDIEDRRSAVQDFTQVIRLNPNDAEAYYQRALGYYE 500


>gi|376003788|ref|ZP_09781591.1| TPR repeat-containing protein [Arthrospira sp. PCC 8005]
 gi|375327819|emb|CCE17344.1| TPR repeat-containing protein [Arthrospira sp. PCC 8005]
          Length = 553

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 130/267 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG A  + G+Y  A+S +D+ LK  P + E    RG A     E + AIS + +A++ 
Sbjct: 272 FNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQAISSYDQALKY 331

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    AW  RG A + LGE  +AI    +AL+++P+     + RG       ++  A+ 
Sbjct: 332 KPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAIS 391

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +K   ++  A+   G+ALS +GEYK+A  ++ +A++   +F  AW +       L
Sbjct: 392 SYDQALKYKPDDHVAWYNRGVALSYLGEYKQAISSYDQALKYKPDFHVAWYNRGNALSYL 451

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+    + L     +  A++ RG  L  LG++K+AI      L   P   E  Y 
Sbjct: 452 GEYKQAISSYDEALKYKPDYHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDLHEAWYN 511

Query: 625 RASCYHAIGEYREAIKDYDAALDLELD 651
           R      +GEY++AI  +D AL  + D
Sbjct: 512 RGVALSDLGEYKQAISSFDQALKYKPD 538



 Score =  120 bits (300), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 145/315 (46%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A    G+Y  AIS +DQ LK  P   +A   RG A     + E A+S + +A++  
Sbjct: 205 NRGVALSYSGEYKQAISSYDQALKYKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYK 264

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG+A + LGE  +A+    +AL+++P+  +    RG   +   ++  A+  
Sbjct: 265 PDLHKAWFNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQAISS 324

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K   ++  A+   G ALS +GEYK+A  ++ +A++   +   AW +       L 
Sbjct: 325 YDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLG 384

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    Q L        A++ RG+ L  LG++K+AI      L   P      Y R
Sbjct: 385 EYKQAISSYDQALKYKPDDHVAWYNRGVALSYLGEYKQAISSYDQALKYKPDFHVAWYNR 444

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            +    +GEY++AI  YD AL  + D         +A+Y +  AL    +       +D 
Sbjct: 445 GNALSYLGEYKQAISSYDEALKYKPDYH-------VAWYNRGNALSYLGEYKQAISSYDQ 497

Query: 686 DGDIDPLFKEYWCKR 700
                P   E W  R
Sbjct: 498 ALKYKPDLHEAWYNR 512



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 98/202 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G+Y  AIS +DQ LK  P    A   RG A ++  E + AIS + +A++  
Sbjct: 341 NRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYK 400

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG A + LGE  +AI    +AL+++P+     + RG       ++  A+  
Sbjct: 401 PDDHVAWYNRGVALSYLGEYKQAISSYDQALKYKPDFHVAWYNRGNALSYLGEYKQAISS 460

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K   +   A+   G ALS +GEYK+A  ++ +A++   +  EAW +      DL 
Sbjct: 461 YDEALKYKPDYHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDLHEAWYNRGVALSDLG 520

Query: 566 NSEKALECLQQVLYIDKRFSKA 587
             ++A+    Q L     + KA
Sbjct: 521 EYKQAISSFDQALKYKPDYHKA 542



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 114/271 (42%), Gaps = 42/271 (15%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G  R    ++  AIS F +AI+  P   +AW  RG A +  GE  +AI    +AL+++P+
Sbjct: 173 GLQRYDNGDVRGAISSFEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISSYDQALKYKPD 232

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
                  RG   +    +  A+      +K   +   A+   G ALS +GEYK+A  ++ 
Sbjct: 233 LHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYD 292

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +A++   +F E W                             FS     RG  L+ LG++
Sbjct: 293 EALKYKPDFHEPW-----------------------------FS-----RGNALYHLGEY 318

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF----- 656
           K+AI      L   P +    Y R +    +GEY++AI  YD AL  + D    +     
Sbjct: 319 KQAISSYDQALKYKPDDHVAWYNRGNALSYLGEYKQAISSYDQALKYKPDDHVAWYNRGN 378

Query: 657 VLQCLAFYQKEIALYTAS---KINSEFCWFD 684
            L  L  Y++ I+ Y  +   K +    W++
Sbjct: 379 ALSYLGEYKQAISSYDQALKYKPDDHVAWYN 409


>gi|17228384|ref|NP_484932.1| hypothetical protein all0889 [Nostoc sp. PCC 7120]
 gi|17130234|dbj|BAB72846.1| all0889 [Nostoc sp. PCC 7120]
          Length = 605

 Score =  122 bits (305), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 142/282 (50%), Gaps = 9/282 (3%)

Query: 376 SKSISVDFRLSRGIAQVNEGK-YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           ++ I  +    RGI    E K Y  AI+ F+  ++ +P Y +A   R  AR    +  AA
Sbjct: 31  NRRIDAETYCKRGITFSRELKDYQGAIAFFNLAVEINPNYAQAYYHRANARYCLADFTAA 90

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--------NSADIL 486
           I+D+ +A+Q NP+  E +  RG A  A G+  +AI +    +EF+P        + A+  
Sbjct: 91  IADYDQALQINPTFAEYYYCRGNAYLAQGDYDQAIANYISTIEFDPLLASNINEDIANAY 150

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + RG+ N    ++  A+ DL   ++      +AY+  G     +GEY++A   H +A+QL
Sbjct: 151 YYRGLNNNDQGNYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQL 210

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           D N  EA+ +    +  L   +KA+    + L I+     AY+ RGL+   L ++++A  
Sbjct: 211 DPNLAEAYQNRGNAHYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLHEYQQAFA 270

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           D +  L  +P++ +  Y R   Y A  +Y+ A+ DY+ +L L
Sbjct: 271 DFNQVLNFNPNDAQAYYQRGLIYEAWQDYQSALADYNQSLQL 312



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 125/265 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+   ++G Y  AI    Q L+  P +  A   RG       E   AI+D   A+Q +P
Sbjct: 153 RGLNNNDQGNYQEAIIDLQQALQWHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDP 212

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA++ RG A  ALG   +AI D ++ LE  P+     + RG+++F   ++  A  D 
Sbjct: 213 NLAEAYQNRGNAHYALGAYQKAIADYNRTLEINPHQVGAYYNRGLISFYLHEYQQAFADF 272

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +  +  +  AY   GL   +  +Y+ A   + +++QL+      +G     Y+ L +
Sbjct: 273 NQVLNFNPNDAQAYYQRGLIYEAWQDYQSALADYNQSLQLNSELAVVYGVRANIYRHLGD 332

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              AL    ++L +   F+  Y  R      LG ++ AI D +  L I+P+  E  Y RA
Sbjct: 333 YPSALADGNRLLELQPNFAAGYCDRATSRRCLGDYRGAIADYNQALQINPNIAEAYYGRA 392

Query: 627 SCYHAIGEYREAIKDYDAALDLELD 651
             + A+ ++  AI DY  ++ +  D
Sbjct: 393 IAHEALRDFIGAIADYTQSIRISPD 417



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 150/353 (42%), Gaps = 51/353 (14%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG      G+Y  AI+  ++ ++ DP   EA   RG A       + AI+D+   ++ NP
Sbjct: 187 RGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAHYALGAYQKAIADYNRTLEINP 246

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG     L E  +A  D ++ L F PN A   ++RG++   ++D+ +A+ D 
Sbjct: 247 HQVGAYYNRGLISFYLHEYQQAFADFNQVLNFNPNDAQAYYQRGLIYEAWQDYQSALADY 306

Query: 507 SACVKLDKE-------NKSAYTYLGLALSSI---------------------------GE 532
           +  ++L+ E         + Y +LG   S++                           G+
Sbjct: 307 NQSLQLNSELAVVYGVRANIYRHLGDYPSALADGNRLLELQPNFAAGYCDRATSRRCLGD 366

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           Y+ A   + +A+Q++ N  EA+      ++ L +   A+    Q + I   F+ AY  RG
Sbjct: 367 YRGAIADYNQALQINPNIAEAYYGRAIAHEALRDFIGAIADYTQSIRISPDFAPAYCNRG 426

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
                LG  K A+ D +  L I+P   E  Y R S ++    YR AI DY  AL+L+ +S
Sbjct: 427 NARRQLGDTKGAVTDYNQALTINPQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPES 486

Query: 653 MEKF-----VLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
              +         L  YQ  +A YT S              I+P + E W  R
Sbjct: 487 ARYYSDRAHARYALQDYQGAVADYTQSIA------------INPGYAEDWYNR 527



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 113/214 (52%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI+ ++Q L+ +P   EA  GR  A    R+   AI+D+T++I+ +P    A+  
Sbjct: 365 GDYRGAIADYNQALQINPNIAEAYYGRAIAHEALRDFIGAIADYTQSIRISPDFAPAYCN 424

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG AR  LG++  A+ D ++AL   P  ++  + RG +++  +++ +A+ D +  ++L  
Sbjct: 425 RGNARRQLGDTKGAVTDYNQALTINPQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQP 484

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           E+   Y+    A  ++ +Y+ A   + ++I ++  + E W +  + +  L   E+AL  L
Sbjct: 485 ESARYYSDRAHARYALQDYQGAVADYTQSIAINPGYAEDWYNRGRSHLLLGYLEEALADL 544

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            Q L     ++ AY LR  +L   G ++ AI D 
Sbjct: 545 NQALKFHPHWASAYLLRADILRNRGDYQAAIADF 578



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 124/257 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+      +Y  A + F+Q+L  +P   +A   RG      ++ ++A++D+ +++Q N
Sbjct: 254 NRGLISFYLHEYQQAFADFNQVLNFNPNDAQAYYQRGLIYEAWQDYQSALADYNQSLQLN 313

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                 +  R      LG+   A+ D ++ LE +PN A    +R        D+  A+ D
Sbjct: 314 SELAVVYGVRANIYRHLGDYPSALADGNRLLELQPNFAAGYCDRATSRRCLGDYRGAIAD 373

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++     AY    +A  ++ ++  A   + ++I++  +F  A+ +     + L 
Sbjct: 374 YNQALQINPNIAEAYYGRAIAHEALRDFIGAIADYTQSIRISPDFAPAYCNRGNARRQLG 433

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +++ A+    Q L I+ + S+AY+ RG L +    ++ AI D +  L + P +      R
Sbjct: 434 DTKGAVTDYNQALTINPQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDR 493

Query: 626 ASCYHAIGEYREAIKDY 642
           A   +A+ +Y+ A+ DY
Sbjct: 494 AHARYALQDYQGAVADY 510



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 120/261 (45%), Gaps = 14/261 (5%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y SA++  +++L+  P +      R T+R    +   AI+D+ +A+Q NP+  EA+  
Sbjct: 331 GDYPSALADGNRLLELQPNFAAGYCDRATSRRCLGDYRGAIADYNQALQINPNIAEAYYG 390

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R  A  AL + + AI D ++++   P+ A     RG    +  D   AV D +  + ++ 
Sbjct: 391 RAIAHEALRDFIGAIADYTQSIRISPDFAPAYCNRGNARRQLGDTKGAVTDYNQALTINP 450

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   AY   G        Y+ A   + +A++L            ++Y D A++  AL+  
Sbjct: 451 QLSEAYYNRGSLHYDQQNYRSAIADYTQALELQ-------PESARYYSDRAHARYALQDY 503

Query: 575 Q-------QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           Q       Q + I+  +++ ++ RG     LG  ++A+ DL+  L   P       LRA 
Sbjct: 504 QGAVADYTQSIAINPGYAEDWYNRGRSHLLLGYLEEALADLNQALKFHPHWASAYLLRAD 563

Query: 628 CYHAIGEYREAIKDYDAALDL 648
                G+Y+ AI D+  + DL
Sbjct: 564 ILRNRGDYQAAIADFQKSADL 584



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 9/209 (4%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AI   + A+E  PN A   + R    +   DF AA+ D    ++++      Y   G A 
Sbjct: 56  AIAFFNLAVEINPNYAQAYYHRANARYCLADFTAAIADYDQALQINPTFAEYYYCRGNAY 115

Query: 528 SSIGEYKKAEEAHLKAIQLD--------RNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
            + G+Y +A   ++  I+ D         +   A+ +      D  N ++A+  LQQ L 
Sbjct: 116 LAQGDYDQAIANYISTIEFDPLLASNINEDIANAYYYRGLNNNDQGNYQEAIIDLQQALQ 175

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
               F+ AY +RG + + LG++++AI D    + +DP+  E    R + ++A+G Y++AI
Sbjct: 176 WHPYFAAAYSIRGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAHYALGAYQKAI 235

Query: 640 KDYDAALDLELDSMEKFVLQCL-AFYQKE 667
            DY+  L++    +  +  + L +FY  E
Sbjct: 236 ADYNRTLEINPHQVGAYYNRGLISFYLHE 264



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 3/184 (1%)

Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDP 412
           +  ++EA R+    +   ++S  IS DF     +RG A+   G    A++ ++Q L  +P
Sbjct: 391 RAIAHEALRDFIGAIADYTQSIRISPDFAPAYCNRGNARRQLGDTKGAVTDYNQALTINP 450

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
              EA   RG+    Q+   +AI+D+T+A++  P +   +  R  AR AL +   A+ D 
Sbjct: 451 QLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQDYQGAVADY 510

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           ++++   P  A+  + RG  +        A+ DL+  +K      SAY      L + G+
Sbjct: 511 TQSIAINPGYAEDWYNRGRSHLLLGYLEEALADLNQALKFHPHWASAYLLRADILRNRGD 570

Query: 533 YKKA 536
           Y+ A
Sbjct: 571 YQAA 574



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 19/149 (12%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +++++++ +LS     RG    ++  Y SAI+ + Q L+  P        R  AR   ++
Sbjct: 443 NQALTINPQLSEAYYNRGSLHYDQQNYRSAIADYTQALELQPESARYYSDRAHARYALQD 502

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN-------SA 483
            + A++D+T++I  NP   E W  RG++   LG   EA+ DL++AL+F P+        A
Sbjct: 503 YQGAVADYTQSIAINPGYAEDWYNRGRSHLLLGYLEEALADLNQALKFHPHWASAYLLRA 562

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKL 512
           DIL  RG       D+ AA+ D      L
Sbjct: 563 DILRNRG-------DYQAAIADFQKSADL 584



 Score = 43.5 bits (101), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 46/90 (51%)

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           F ++L + + A+      + I+  +++AY+ R    + L     AI D    L I+P+  
Sbjct: 46  FSRELKDYQGAIAFFNLAVEINPNYAQAYYHRANARYCLADFTAAIADYDQALQINPTFA 105

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           E  Y R + Y A G+Y +AI +Y + ++ +
Sbjct: 106 EYYYCRGNAYLAQGDYDQAIANYISTIEFD 135



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 36/62 (58%)

Query: 75  RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
           R   Y +L  ++  I D ++A+QLDP L +AY  +G A  ALG  ++A++ + +  E   
Sbjct: 187 RGNIYYKLGEYRQAIADHERAVQLDPNLAEAYQNRGNAHYALGAYQKAIADYNRTLEINP 246

Query: 135 HQ 136
           HQ
Sbjct: 247 HQ 248


>gi|338814927|ref|ZP_08626892.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
 gi|337273094|gb|EGO61766.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
          Length = 525

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 6/301 (1%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           SV    SRG+     GK  +A++ +++ L+ DP Y  A   RG     Q+    AI+DF 
Sbjct: 202 SVQVYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADFN 261

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG--IVNFKFK 497
           +A++ NPS+  A+ RRG+   A G   +AI D SKAL+ +       + RG    N   +
Sbjct: 262 KALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNRGNAYSNRGLR 321

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           D   A+ D S  ++++  N  AY   GL   + G + +A     +A++L   F  A+ + 
Sbjct: 322 D--QAIADYSLAIEINPRNAIAYRNRGLVYWTKGMHDQAIADFSQALELRPGFKLAYINR 379

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              Y+D    + +LE   +VL ++  +  AY  RG     +G++ +AI D +  L + P 
Sbjct: 380 GDVYRDKGRYDLSLEDFNKVLTLNSDYVFAYQSRGQTYFAMGEYDRAIIDYNKALALKPQ 439

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN 677
             E    RA  Y  +G+  EA+ DYDAAL L             A YQ+  A +TA  + 
Sbjct: 440 VAEVHKNRADAYRKLGKATEAVADYDAALKLNPGLDPYIYFYKAALYQQ--AGFTADAVQ 497

Query: 678 S 678
           +
Sbjct: 498 N 498



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 127/264 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG      GKY  AI+ F + ++ D   P+A   RG A   ++  + A++DF + I  
Sbjct: 71  LQRGNIYYTRGKYVEAIADFTRSIQLDAANPKAFYSRGLAFRARKMYDQALTDFNKVIAL 130

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N    EA+ + G  +A+     +A++D +K LE  P     L ERG V F  + ++ A+ 
Sbjct: 131 NRKYWEAYYQSGLVQASKENYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALR 190

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++LD  +   Y   GL  +  G+ + A   + KA+++D +++ A+ +    YQ  
Sbjct: 191 DYNRAIELDPRSVQVYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQLQ 250

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               +A+    + L ++   + AY  RG   +  G + +AI D S  L ID   I     
Sbjct: 251 KRYGEAIADFNKALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNN 310

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R + Y   G   +AI DY  A+++
Sbjct: 311 RGNAYSNRGLRDQAIADYSLAIEI 334



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 125/266 (46%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ Q ++  Y  A+  + + L+ +P +  +L  RG       + + A+ D+  AI+ +P 
Sbjct: 142 GLVQASKENYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPR 201

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           + + +  RG   A  G+   A+ D +KALE +P+     + RG +    K +  A+ D +
Sbjct: 202 SVQVYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADFN 261

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+  + +AY   G    + G Y +A   + KA+ +D  ++ A+ +    Y +    
Sbjct: 262 KALELNPSSAAAYDRRGRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNRGNAYSNRGLR 321

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+      + I+ R + AY  RGL+    G H +AI D S  L + P        R  
Sbjct: 322 DQAIADYSLAIEINPRNAIAYRNRGLVYWTKGMHDQAIADFSQALELRPGFKLAYINRGD 381

Query: 628 CYHAIGEYREAIKDYDAALDLELDSM 653
            Y   G Y  +++D++  L L  D +
Sbjct: 382 VYRDKGRYDLSLEDFNKVLTLNSDYV 407



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 126/263 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+A      Y  A++ F++++  +  Y EA    G  +A +   E A+ D+T+ ++ N
Sbjct: 106 SRGLAFRARKMYDQALTDFNKVIALNRKYWEAYYQSGLVQASKENYEQAVRDYTKTLELN 165

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    +   RG    AL +  +A++D ++A+E +P S  + + RG+V  +     AA+ D
Sbjct: 166 PRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQVYNSRGLVYAETGKPEAALAD 225

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +++D +   AY   G        Y +A     KA++L+ +   A+    + Y    
Sbjct: 226 YNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADFNKALELNPSSAAAYDRRGRCYYAQG 285

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N ++A+    + L ID R+  AY+ RG      G   +AI D S  + I+P N      R
Sbjct: 286 NYDQAIADYSKALDIDSRYIHAYNNRGNAYSNRGLRDQAIADYSLAIEINPRNAIAYRNR 345

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
              Y   G + +AI D+  AL+L
Sbjct: 346 GLVYWTKGMHDQAIADFSQALEL 368



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 34/263 (12%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG       + E A+SDF+ AI  + S   A+ +RG      G+ VEAI D +++++ + 
Sbjct: 39  RGNFYYIMGQHEQAMSDFSRAIGLDSSHAGAYLQRGNIYYTRGKYVEAIADFTRSIQLDA 98

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            +    + RG+     K ++ A+ D +  + L+++   AY   GL  +S   Y++A   +
Sbjct: 99  ANPKAFYSRGLAFRARKMYDQALTDFNKVIALNRKYWEAYYQSGLVQASKENYEQAVRDY 158

Query: 541 LK----------------------------------AIQLDRNFLEAWGHLTQFYQDLAN 566
            K                                  AI+LD   ++ +      Y +   
Sbjct: 159 TKTLELNPRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQVYNSRGLVYAETGK 218

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E AL    + L ID  +  AY+ RG L     ++ +AI D +  L ++PS+      R 
Sbjct: 219 PEAALADYNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADFNKALELNPSSAAAYDRRG 278

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
            CY+A G Y +AI DY  ALD++
Sbjct: 279 RCYYAQGNYDQAIADYSKALDID 301



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 99/216 (45%)

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A  S P     +  RG     +G+  +A+ D S+A+  + + A    +RG + +    + 
Sbjct: 25  ATVSEPQDANDFYERGNFYYIMGQHEQAMSDFSRAIGLDSSHAGAYLQRGNIYYTRGKYV 84

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+ D +  ++LD  N  A+   GLA  +   Y +A     K I L+R + EA+      
Sbjct: 85  EAIADFTRSIQLDAANPKAFYSRGLAFRARKMYDQALTDFNKVIALNRKYWEAYYQSGLV 144

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
                N E+A+    + L ++ R   +   RG +   L Q  +A++D +  + +DP +++
Sbjct: 145 QASKENYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQ 204

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
               R   Y   G+   A+ DY+ AL+++ D +  +
Sbjct: 205 VYNSRGLVYAETGKPEAALADYNKALEIDPDYVHAY 240



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 44/76 (57%)

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           ++ RG   + +GQH++A+ D S  +G+D S+      R + Y+  G+Y EAI D+  ++ 
Sbjct: 36  FYERGNFYYIMGQHEQAMSDFSRAIGLDSSHAGAYLQRGNIYYTRGKYVEAIADFTRSIQ 95

Query: 648 LELDSMEKFVLQCLAF 663
           L+  + + F  + LAF
Sbjct: 96  LDAANPKAFYSRGLAF 111



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 22/142 (15%)

Query: 47  CSLRNWSKAIR-ILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQA 105
            S  N+ +A+R    +L      +  +  R   +  LE     +RD ++A++LDP  +Q 
Sbjct: 146 ASKENYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQV 205

Query: 106 YILKGCAFSALGRKEEALSVWEKG------YEHALHQSADLKQF--------------LE 145
           Y  +G  ++  G+ E AL+ + K       Y HA +   DL Q               LE
Sbjct: 206 YNSRGLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQLQKRYGEAIADFNKALE 265

Query: 146 LEELLTAAKQDRSVTCEYDVSN 167
           L    +AA  DR   C Y   N
Sbjct: 266 LNP-SSAAAYDRRGRCYYAQGN 286


>gi|434387210|ref|YP_007097821.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
 gi|428018200|gb|AFY94294.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
          Length = 490

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 127/270 (47%), Gaps = 34/270 (12%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +VD   +RGIA+++ G +  A++ FD+++   P Y +A  GRG  R    + +AA++DF 
Sbjct: 201 NVDAFYNRGIAKLDLGDFTGALADFDRVIALRPNYAKAYNGRGKTRELMGDSQAALADFN 260

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            AI  NP++  A+  R  A+ +LG    AI D  +     P  A     R I+  +  D 
Sbjct: 261 RAIALNPNSSNAYFNRANAQNSLGNRTGAISDYDRVASINPTDAFAFFNRAIIKAENGDK 320

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ D +  +KL+ +   AY   G+  SSIG  + A   + +AIQL  N          
Sbjct: 321 TQAIADYTTALKLNPKLVEAYNNRGILYSSIGNRQAAIADYTQAIQLKPN---------- 370

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
                                   +  AY  RG++ +  G+++KAI D + G+  DP N 
Sbjct: 371 ------------------------YGTAYLNRGIVYYVAGEYRKAIADYTQGIASDPKNA 406

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +  + R      + EY++A+ DY+ A+ L+
Sbjct: 407 DLYFNRGVSLAQLQEYQKALADYNTAIRLQ 436



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 5/297 (1%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD   +RGI +   G    AI+ +   L  +P + EA   RG AR    +   A++DF  
Sbjct: 100 VDAYNNRGIVKGLNGDSTGAIADYTSALVLNPKFFEAYANRGFARLNIGDRAGALADFQA 159

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A    P+  +    +G   +  G+   AI   ++A++ +P + D  + RGI      DF 
Sbjct: 160 ASAIKPTDPQLAIGKGIILSQNGDKQGAIASYAQAIQLDPKNVDAFYNRGIAKLDLGDFT 219

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+ D    + L      AY   G     +G+ + A     +AI L+ N   A+ +    
Sbjct: 220 GALADFDRVIALRPNYAKAYNGRGKTRELMGDSQAALADFNRAIALNPNSSNAYFNRANA 279

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
              L N   A+    +V  I+   + A+  R ++    G   +AI D ++ L ++P  +E
Sbjct: 280 QNSLGNRTGAISDYDRVASINPTDAFAFFNRAIIKAENGDKTQAIADYTTALKLNPKLVE 339

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT 672
               R   Y +IG  + AI DY  A+ L+ +    ++ + + +     Y+K IA YT
Sbjct: 340 AYNNRGILYSSIGNRQAAIADYTQAIQLKPNYGTAYLNRGIVYYVAGEYRKAIADYT 396



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 124/278 (44%), Gaps = 5/278 (1%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI+ F++ +     + +A   RG  +    +   AI+D+T A+  NP   EA+  RG AR
Sbjct: 85  AIADFNRAIALQSNFVDAYNNRGIVKGLNGDSTGAIADYTSALVLNPKFFEAYANRGFAR 144

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             +G+   A+ D   A   +P    +   +GI+  +  D   A+   +  ++LD +N  A
Sbjct: 145 LNIGDRAGALADFQAASAIKPTDPQLAIGKGIILSQNGDKQGAIASYAQAIQLDPKNVDA 204

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +   G+A   +G++  A     + I L  N+ +A+    +  + + +S+ AL    + + 
Sbjct: 205 FYNRGIAKLDLGDFTGALADFDRVIALRPNYAKAYNGRGKTRELMGDSQAALADFNRAIA 264

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           ++   S AY  R    + LG    AI D      I+P++    + RA      G+  +AI
Sbjct: 265 LNPNSSNAYFNRANAQNSLGNRTGAISDYDRVASINPTDAFAFFNRAIIKAENGDKTQAI 324

Query: 640 KDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT 672
            DY  AL L    +E +     +   +   Q  IA YT
Sbjct: 325 ADYTTALKLNPKLVEAYNNRGILYSSIGNRQAAIADYT 362



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 93/191 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +R  AQ + G    AIS +D++   +P    A   R   +A   +   AI+D+T A++ 
Sbjct: 274 FNRANAQNSLGNRTGAISDYDRVASINPTDAFAFFNRAIIKAENGDKTQAIADYTTALKL 333

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   EA+  RG   +++G    AI D ++A++ +PN       RGIV +   ++  A+ 
Sbjct: 334 NPKLVEAYNNRGILYSSIGNRQAAIADYTQAIQLKPNYGTAYLNRGIVYYVAGEYRKAIA 393

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  +  D +N   Y   G++L+ + EY+KA   +  AI+L  N   A+ +       L
Sbjct: 394 DYTQGIASDPKNADLYFNRGVSLAQLQEYQKALADYNTAIRLQPNNALAYSNRGLLQAQL 453

Query: 565 ANSEKALECLQ 575
             +  A E L+
Sbjct: 454 QANSAATEDLK 464



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 2/137 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI   + G   +AI+ + Q ++  P Y  A + RG       E   AI+D+T+ I S+
Sbjct: 343 NRGILYSSIGNRQAAIADYTQAIQLKPNYGTAYLNRGIVYYVAGEYRKAIADYTQGIASD 402

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   + +  RG + A L E  +A+ D + A+  +PN+A     RG++  + +  +AA ED
Sbjct: 403 PKNADLYFNRGVSLAQLQEYQKALADYNTAIRLQPNNALAYSNRGLLQAQLQANSAATED 462

Query: 506 LSACVKL--DKENKSAY 520
           L    +L   + N++AY
Sbjct: 463 LKTAARLFQAQNNQAAY 479


>gi|357415668|ref|YP_004927403.1| Tetratricopeptide TPR_1 repeat-containing protein [Streptomyces
            flavogriseus ATCC 33331]
 gi|320013204|gb|ADW08052.1| Tetratricopeptide TPR_1 repeat-containing protein [Streptomyces
            flavogriseus ATCC 33331]
          Length = 1261

 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 2/273 (0%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG      G+Y  A++     L+ DP Y  AL  RG A       + A++D+T A++ +
Sbjct: 819  ARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSRGDAHKQASRYDEAVTDYTAALELD 878

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A   RG A    G   EA+ DL+ ALE +P +A  +  RG  + +   ++ AV D
Sbjct: 879  PTYATALGSRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTD 938

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            L+A ++LD     A    G      G Y++A   +  A++LD     A G   Q +Q   
Sbjct: 939  LTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAG 998

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              ++A+  L   L +D   + A   RG      G++++A+ D ++ L +DP++   L  R
Sbjct: 999  RYDEAVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQR 1058

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
               +   G Y +AI DY AA  LELD  + + L
Sbjct: 1059 GETHRQAGRYEQAITDYTAA--LELDPTDAWAL 1089



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 134/296 (45%), Gaps = 9/296 (3%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG      G+Y  A++ +   L+ DP Y  AL  RG         + A++D T  ++ +
Sbjct: 785  ARGDTHRQAGRYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELD 844

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A   RG A        EA+ D + ALE +P  A  L  RG  + +   ++ AV D
Sbjct: 845  PTYAAALGSRGDAHKQASRYDEAVTDYTAALELDPTYATALGSRGDAHRQAGRYDEAVTD 904

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            L+A ++LD  N  A    G A    G Y +A      A++LD     A G   + +Q   
Sbjct: 905  LTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPTLTWALGARGETHQQAG 964

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              E+A+      L +D   + A   RG      G++ +A+ DL++ L +DP+    L  R
Sbjct: 965  RYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPTLTWALGAR 1024

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVL-------QCLAFYQKEIALYTAS 674
               +   G Y +A+ DY AA  LELD  + + L       +    Y++ I  YTA+
Sbjct: 1025 GETHQQAGRYEQAVADYTAA--LELDPTDDWALAQRGETHRQAGRYEQAITDYTAA 1078



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 136/296 (45%), Gaps = 9/296 (3%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG      G+Y  A++     L+ DP Y  AL  RG         + A++D+T A++ +
Sbjct: 751  ARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARGDTHRQAGRYDEAVTDYTAALELD 810

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A   RG+     G   EA+ DL+  LE +P  A  L  RG  + +   ++ AV D
Sbjct: 811  PTYATALGARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSRGDAHKQASRYDEAVTD 870

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +A ++LD    +A    G A    G Y +A      A++LD     A G   Q +Q   
Sbjct: 871  YTAALELDPTYATALGSRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAG 930

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              ++A+  L   L +D   + A   RG      G++++A+ D ++ L +DP+N   +  R
Sbjct: 931  RYDEAVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSR 990

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVL-------QCLAFYQKEIALYTAS 674
               +   G Y EA+ D  AA  LELD    + L       Q    Y++ +A YTA+
Sbjct: 991  GQAHQQAGRYDEAVTDLTAA--LELDPTLTWALGARGETHQQAGRYEQAVADYTAA 1044



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 159/366 (43%), Gaps = 7/366 (1%)

Query: 290 KASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDST---ESRS 346
           +   +++ GR      D+   L  D           +++ ++   D   +D T   E   
Sbjct: 616 RGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTHRQAGRYDEAVTDYTAALELDP 675

Query: 347 KLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISI 403
            L++      ET  +A R  +  VT  + +  +   +  +   RG A    G++  A++ 
Sbjct: 676 TLTWALGARGETHRQAGRYDE-AVTDYTAALELDPTYATALGARGQAHQQAGRHEQAVTD 734

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
               L+ DP Y  AL  RG         + A++D T A++ +P+   A   RG      G
Sbjct: 735 LTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARGDTHRQAG 794

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
              EA+ D + ALE +P  A  L  RG  + +   ++ AV DL+A ++LD    +A    
Sbjct: 795 RYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSR 854

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G A      Y +A   +  A++LD  +  A G     ++     ++A+  L   L +D  
Sbjct: 855 GDAHKQASRYDEAVTDYTAALELDPTYATALGSRGDAHRQAGRYDEAVTDLTAALELDPT 914

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            + A   RG      G++ +A+ DL++ L +DP+    L  R   +   G Y +A+ DY 
Sbjct: 915 NAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVADYT 974

Query: 644 AALDLE 649
           AAL+L+
Sbjct: 975 AALELD 980



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 123/264 (46%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            SRG A     +Y  A++ +   L+ DP Y  AL  RG A       + A++D T A++ +
Sbjct: 853  SRGDAHKQASRYDEAVTDYTAALELDPTYATALGSRGDAHRQAGRYDEAVTDLTAALELD 912

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A   RGQA    G   EA+ DL+ ALE +P     L  RG  + +   +  AV D
Sbjct: 913  PTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVAD 972

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +A ++LD  N  A    G A    G Y +A      A++LD     A G   + +Q   
Sbjct: 973  YTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDPTLTWALGARGETHQQAG 1032

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              E+A+      L +D     A   RG      G++++AI D ++ L +DP++   L  R
Sbjct: 1033 RYEQAVADYTAALELDPTDDWALAQRGETHRQAGRYEQAITDYTAALELDPTDAWALGSR 1092

Query: 626  ASCYHAIGEYREAIKDYDAALDLE 649
               +   G Y +A+ D  AAL+L+
Sbjct: 1093 GQAHQQAGRYEQAVTDLTAALELD 1116



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 121/263 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGI      +   A++ FD+ +  +     A   RG         + A++D T A++  P
Sbjct: 548 RGILLYRSDQDEEALTEFDRAIAHNARNALAWARRGEEHRLLGNEDQAVADLTAALELEP 607

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   A   RG+     G + EA+ DL+ ALE +P     L  RG  + +   ++ AV D 
Sbjct: 608 TNAWALGSRGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTHRQAGRYDEAVTDY 667

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +A ++LD     A    G      G Y +A   +  A++LD  +  A G   Q +Q    
Sbjct: 668 TAALELDPTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTYATALGARGQAHQQAGR 727

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+  L   L +D  ++ A   RG      G++ +A+ DL++ L +DP+    L  R 
Sbjct: 728 HEQAVTDLTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARG 787

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
             +   G Y EA+ DY AAL+L+
Sbjct: 788 DTHRQAGRYDEAVTDYTAALELD 810



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 119/264 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG      G+   A++     L+ DP    AL  RG         + A++D+T A++ +
Sbjct: 615 SRGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTHRQAGRYDEAVTDYTAALELD 674

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   RG+     G   EA+ D + ALE +P  A  L  RG  + +      AV D
Sbjct: 675 PTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTYATALGARGQAHQQAGRHEQAVTD 734

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L+A ++LD    +A    G      G Y +A      A++LD  +  A G     ++   
Sbjct: 735 LTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAALELDPTYAAALGARGDTHRQAG 794

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+      L +D  ++ A   RG      G++ +A+ DL++ L +DP+    L  R
Sbjct: 795 RYDEAVTDYTAALELDPTYATALGARGETHRQAGRYDEAVTDLTATLELDPTYAAALGSR 854

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
              +     Y EA+ DY AAL+L+
Sbjct: 855 GDAHKQASRYDEAVTDYTAALELD 878



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 139/636 (21%), Positives = 244/636 (38%), Gaps = 53/636 (8%)

Query: 11   YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYEI 69
            YR ++  + + E D  +  ++  A A   R E  +L  L N  +A+  L + L  +    
Sbjct: 553  YRSDQDEEALTEFDRAIAHNARNALAWARRGEEHRL--LGNEDQAVADLTAALELEPTNA 610

Query: 70   QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
              + +R   + Q   ++  + D   AL+LDPTL  A   +G      GR +EA++     
Sbjct: 611  WALGSRGETHQQAGRNQEAVADLTAALELDPTLTWALGARGDTHRQAGRYDEAVT----- 665

Query: 130  YEHALHQSADLKQFLELEELLTAAKQDRSVT----CEYD--VSNSMSSLTVSES---GLN 180
                     D    LEL+  LT A   R  T      YD  V++  ++L +  +    L 
Sbjct: 666  ---------DYTAALELDPTLTWALGARGETHRQAGRYDEAVTDYTAALELDPTYATALG 716

Query: 181  ANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAKGGSSVPVSKS 239
            A  +  + +  H ++    +++   D +   +  +  D     GR DEA    +  +   
Sbjct: 717  ARGQAHQQAGRHEQAVTDLTAALELDPTYAAALGARGDTHRLAGRYDEAVTDLTAAL--- 773

Query: 240  GLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSD-------DFDICNGPIDKAS 292
                     E+   +  +      TH  R A   +   +D       D         +  
Sbjct: 774  ---------ELDPTYAAALGARGDTH--RQAGRYDEAVTDYTAALELDPTYATALGARGE 822

Query: 293  VNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKW 352
             + + GR      D+   L  D        +  +++ ++S  D   +D T +        
Sbjct: 823  THRQAGRYDEAVTDLTATLELDPTYAAALGSRGDAHKQASRYDEAVTDYTAALELDPTYA 882

Query: 353  DMLKETSNEAKRNKKFCVTRISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQI 407
              L    +  ++  ++       + ++ +D        SRG A    G+Y  A++     
Sbjct: 883  TALGSRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAA 942

Query: 408  LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
            L+ DP    AL  RG         E A++D+T A++ +P+   A   RGQA    G   E
Sbjct: 943  LELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDE 1002

Query: 468  AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
            A+ DL+ ALE +P     L  RG  + +   +  AV D +A ++LD  +  A    G   
Sbjct: 1003 AVTDLTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQRGETH 1062

Query: 528  SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
               G Y++A   +  A++LD     A G   Q +Q     E+A+  L   L +D     A
Sbjct: 1063 RQAGRYEQAITDYTAALELDPTDAWALGSRGQAHQQAGRYEQAVTDLTAALELDPTLDWA 1122

Query: 588  YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
               R       G  ++A  D+       P ++EC +
Sbjct: 1123 LASRSQAHRQAGHREEARMDVEQATEAHPDDLECAF 1158



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 4/280 (1%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            SRG A    G+Y  A++     L+ DP    A+  RG A       + A++D T A++ +
Sbjct: 887  SRGDAHRQAGRYDEAVTDLTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELD 946

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A   RG+     G   +A+ D + ALE +P +A  +  RG  + +   ++ AV D
Sbjct: 947  PTLTWALGARGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTD 1006

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            L+A ++LD     A    G      G Y++A   +  A++LD     A     + ++   
Sbjct: 1007 LTAALELDPTLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQRGETHRQAG 1066

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              E+A+      L +D   + A   RG      G++++A+ DL++ L +DP+    L  R
Sbjct: 1067 RYEQAITDYTAALELDPTDAWALGSRGQAHQQAGRYEQAVTDLTAALELDPTLDWALASR 1126

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSM----EKFVLQCL 661
            +  +   G   EA  D + A +   D +    EK +L+ +
Sbjct: 1127 SQAHRQAGHREEARMDVEQATEAHPDDLECAFEKLMLETV 1166



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 114/255 (44%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G    A++     L+ +P    AL  RG         + A++D T A++ +P+   A   
Sbjct: 590 GNEDQAVADLTAALELEPTNAWALGSRGETHQQAGRNQEAVADLTAALELDPTLTWALGA 649

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG      G   EA+ D + ALE +P     L  RG  + +   ++ AV D +A ++LD 
Sbjct: 650 RGDTHRQAGRYDEAVTDYTAALELDPTLTWALGARGETHRQAGRYDEAVTDYTAALELDP 709

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
              +A    G A    G +++A      A++LD  +  A G     ++     ++A+  L
Sbjct: 710 TYATALGARGQAHQQAGRHEQAVTDLTAALELDPTYAAALGARGDTHRLAGRYDEAVTDL 769

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
              L +D  ++ A   RG      G++ +A+ D ++ L +DP+    L  R   +   G 
Sbjct: 770 TAALELDPTYAAALGARGDTHRQAGRYDEAVTDYTAALELDPTYATALGARGETHRQAGR 829

Query: 635 YREAIKDYDAALDLE 649
           Y EA+ D  A L+L+
Sbjct: 830 YDEAVTDLTATLELD 844



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 100/243 (41%), Gaps = 9/243 (3%)

Query: 290  KASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDST---ESRS 346
            +   +++ GR      D    L  D  +     +  +++ ++   D   +D T   E   
Sbjct: 956  RGETHQQAGRYEQAVADYTAALELDPTNAWAIGSRGQAHQQAGRYDEAVTDLTAALELDP 1015

Query: 347  KLSFKWDMLKETSNEAKRNKKFCVTRISKSK-SISVDFRLS-RGIAQVNEGKYASAISIF 404
             L++      ET  +A R ++      +  +   + D+ L+ RG      G+Y  AI+ +
Sbjct: 1016 TLTWALGARGETHQQAGRYEQAVADYTAALELDPTDDWALAQRGETHRQAGRYEQAITDY 1075

Query: 405  DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
               L+ DP    AL  RG A       E A++D T A++ +P+   A   R QA    G 
Sbjct: 1076 TAALELDPTDAWALGSRGQAHQQAGRYEQAVTDLTAALELDPTLDWALASRSQAHRQAGH 1135

Query: 465  SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED----LSACVKLDKENKSAY 520
              EA  D+ +A E  P+  +   E+ ++      F A  E     L++ V    E K++Y
Sbjct: 1136 REEARMDVEQATEAHPDDLECAFEKLMLETVEGRFEAFREQWRQLLTSPVNPQDETKASY 1195

Query: 521  TYL 523
              L
Sbjct: 1196 LRL 1198


>gi|124024536|ref|YP_001018843.1| hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964822|gb|ABM79578.1| Hypothetical protein P9303_28481 [Prochlorococcus marinus str. MIT
           9303]
          Length = 462

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 154/302 (50%), Gaps = 6/302 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+   G Y  AI+ +++ ++ +P Y +A   RG A+    + + AI+D+ ++I+ N
Sbjct: 84  NRGLAKRKSGDYQGAIADYNKAIEINPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEIN 143

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG A+   G+   AI D +K++E  P  AD  + RG   +K KD   A++D
Sbjct: 144 PQYADAYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDD 203

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++ +   AY+  G A   + +Y+ A     KAI++      A+ +      +L 
Sbjct: 204 FNKAIEINPQLAIAYSNRGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELK 263

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    + + I+ +++ AY+ RG++    G  ++AI D +  + I+P        R
Sbjct: 264 DYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQEAIADFNKAIEINPQLAIAYSNR 323

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-ASKINSE 679
                  G+ +EAI D++ A+++  +    +       + L  YQ+ IA Y  A +IN +
Sbjct: 324 GIVKRESGDTQEAIADFNRAIEINPEYAAAYNNRGIAKKNLGNYQEAIADYNKAIEINPQ 383

Query: 680 FC 681
           + 
Sbjct: 384 YA 385



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 154/320 (48%), Gaps = 7/320 (2%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D   +RG A+   G    AI+ +++ ++ +P Y +A   RG A+    + + AI+D+ +
Sbjct: 113 ADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQYADAYYNRGNAKRKSGDYQGAIADYNK 172

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           +I+ NP   +A+  RG+A+  L ++  AI D +KA+E  P  A     RG    + KD+ 
Sbjct: 173 SIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELKDYQ 232

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+ D +  +++  ++ +AY   G A   + +Y+ A     KAI+++  +  A+ +    
Sbjct: 233 GAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRGIV 292

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            ++  ++++A+    + + I+ + + AY  RG++    G  ++AI D +  + I+P    
Sbjct: 293 KRESGDTQEAIADFNKAIEINPQLAIAYSNRGIVKRESGDTQEAIADFNRAIEINPEYAA 352

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEF 680
               R      +G Y+EAI DY+ A+++             A+Y + IA Y         
Sbjct: 353 AYNNRGIAKKNLGNYQEAIADYNKAIEINPQY-------AAAYYNRGIAKYKLKDTQGAI 405

Query: 681 CWFDIDGDIDPLFKEYWCKR 700
              +   +I+P +   +  R
Sbjct: 406 AELNKAIEINPQYAAAYKTR 425



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 149/293 (50%), Gaps = 6/293 (2%)

Query: 362 AKRNKKFCVTRISK-SKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
           AKR    C   I+  +KSI +     D   +RG A+   G Y  AI+ +++ ++ +P Y 
Sbjct: 122 AKRKSGDCQGAIADYNKSIEINPQYADAYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYA 181

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           +A   RG A+   ++ + AI DF +AI+ NP    A+  RG A+  L +   AI D +KA
Sbjct: 182 DAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELKDYQGAISDFNKA 241

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           +E  P  A   + RG    + KD+  A+ D +  ++++ +  +AY   G+     G+ ++
Sbjct: 242 IEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRGIVKRESGDTQE 301

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A     KAI+++     A+ +     ++  ++++A+    + + I+  ++ AY+ RG+  
Sbjct: 302 AIADFNKAIEINPQLAIAYSNRGIVKRESGDTQEAIADFNRAIEINPEYAAAYNNRGIAK 361

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             LG +++AI D +  + I+P      Y R    + + + + AI + + A+++
Sbjct: 362 KNLGNYQEAIADYNKAIEINPQYAAAYYNRGIAKYKLKDTQGAIAELNKAIEI 414



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 142/283 (50%), Gaps = 14/283 (4%)

Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS- 386
           Y+KS   + + +D+  +R +  +K   LK+T           +   +K+  I+    ++ 
Sbjct: 170 YNKSIEVNPQYADAYNNRGRAKYK---LKDTQG--------AIDDFNKAIEINPQLAIAY 218

Query: 387 --RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG A+     Y  AIS F++ ++  P    A   RG A+   ++ + AISDF +AI+ 
Sbjct: 219 SNRGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEI 278

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A+  RG  +   G++ EAI D +KA+E  P  A     RGIV  +  D   A+ 
Sbjct: 279 NPQYAAAYYNRGIVKRESGDTQEAIADFNKAIEINPQLAIAYSNRGIVKRESGDTQEAIA 338

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++++ E  +AY   G+A  ++G Y++A   + KAI+++  +  A+ +       L
Sbjct: 339 DFNRAIEINPEYAAAYNNRGIAKKNLGNYQEAIADYNKAIEINPQYAAAYYNRGIAKYKL 398

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +++ A+  L + + I+ +++ AY  RG++   +G  K A  D
Sbjct: 399 KDTQGAIAELNKAIEINPQYAAAYKTRGIVKELVGDLKGACAD 441



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 129/263 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+ +   Y  AI  + + +  +P Y  A   RG A+    + + AI+D+ +AI+ N
Sbjct: 50  NRGIAKYDLKDYQGAIVDWAKAIDINPQYVAAYNNRGLAKRKSGDYQGAIADYNKAIEIN 109

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG A+   G+   AI D +K++E  P  AD  + RG    K  D+  A+ D
Sbjct: 110 PQYADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQYADAYYNRGNAKRKSGDYQGAIAD 169

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++ +   AY   G A   + + + A +   KAI+++     A+ +      +L 
Sbjct: 170 YNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELK 229

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    + + I  + + AY+ RG     L  ++ AI D +  + I+P      Y R
Sbjct: 230 DYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNR 289

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
                  G+ +EAI D++ A+++
Sbjct: 290 GIVKRESGDTQEAIADFNKAIEI 312



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 125/250 (50%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           + I+   ++++ +P    A   RG A+   ++ + AI D+ +AI  NP    A+  RG A
Sbjct: 29  TTIAELTKLIETNPQVAAAYYNRGIAKYDLKDYQGAIVDWAKAIDINPQYVAAYNNRGLA 88

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
           +   G+   AI D +KA+E  P  AD  + RG    K  D   A+ D +  ++++ +   
Sbjct: 89  KRKSGDYQGAIADYNKAIEINPQYADAYYNRGNAKRKSGDCQGAIADYNKSIEINPQYAD 148

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
           AY   G A    G+Y+ A   + K+I+++  + +A+ +  +    L +++ A++   + +
Sbjct: 149 AYYNRGNAKRKSGDYQGAIADYNKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAI 208

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            I+ + + AY  RG     L  ++ AI D +  + I P +    Y R +    + +Y+ A
Sbjct: 209 EINPQLAIAYSNRGNAKDELKDYQGAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGA 268

Query: 639 IKDYDAALDL 648
           I D++ A+++
Sbjct: 269 ISDFNKAIEI 278



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 136/278 (48%), Gaps = 5/278 (1%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +KSI V+ + +     RG A+        AI  F++ ++ +P    A   RG A+   ++
Sbjct: 171 NKSIEVNPQYADAYNNRGRAKYKLKDTQGAIDDFNKAIEINPQLAIAYSNRGNAKDELKD 230

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AISDF +AI+  P    A+  RG A+  L +   AI D +KA+E  P  A   + RG
Sbjct: 231 YQGAISDFNKAIEIIPQDAAAYYNRGNAKDELKDYQGAISDFNKAIEINPQYAAAYYNRG 290

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           IV  +  D   A+ D +  ++++ +   AY+  G+     G+ ++A     +AI+++  +
Sbjct: 291 IVKRESGDTQEAIADFNKAIEINPQLAIAYSNRGIVKRESGDTQEAIADFNRAIEINPEY 350

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +     ++L N ++A+    + + I+ +++ AY+ RG+  + L   + AI +L+ 
Sbjct: 351 AAAYNNRGIAKKNLGNYQEAIADYNKAIEINPQYAAAYYNRGIAKYKLKDTQGAIAELNK 410

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            + I+P        R      +G+ + A  D+  A  L
Sbjct: 411 AIEINPQYAAAYKTRGIVKELVGDLKGACADWKEASSL 448


>gi|254417461|ref|ZP_05031201.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196175726|gb|EDX70750.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 374

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 139/271 (51%), Gaps = 14/271 (5%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RGI   + GK+ +AI+ FDQ+++ +P +PEA   RGT+       + A++ F +AI  
Sbjct: 79  LNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMILGRNKEALASFDQAIAC 138

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+  +AW  RG     LG    A++   KAL   PN  +I + +G +  + +  + A+ 
Sbjct: 139 NPNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWYNQGCLLMQLQKRDDAIA 198

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------L 557
             +  ++L  ++  ++   G+ +S +G  K+A   + KA++ D N    W +       L
Sbjct: 199 SFNKALELKPDHIGSWINKGIVISEMGREKEALLYYEKALEFDPNETHCWNNRGLTMRRL 258

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
            +    +A+ ++ALEC+ +         +A+  RG  L  +G++++A+      L ++P 
Sbjct: 259 GRLQDAVASYDRALECMPENY-------EAWDNRGYALVKMGRYREAMASFDKALEVNPD 311

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           ++  +Y +  CY A G+   A+   + A+ +
Sbjct: 312 HVNAVYNKGYCYAAQGKVTLAVNYIEQAIKV 342



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 130/312 (41%), Gaps = 7/312 (2%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +V F + +G+  +  G + +A+++F   +K  P   EA  G G A    +  E AI+ F 
Sbjct: 6   AVKFIIQQGMRCLQGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQRYEEAIASFD 65

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +A   NP     W  RG   +  G+   AI    + +E EP   +  + RG         
Sbjct: 66  QAGVLNPQDASIWLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMILGRN 125

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+      +  +     A++  G  L+++G +K A ++  KA+ +  N  E W +   
Sbjct: 126 KEALASFDQAIACNPNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWYNQGC 185

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
               L   + A+    + L +      ++  +G+++  +G+ K+A+      L  DP+  
Sbjct: 186 LLMQLQKRDDAIASFNKALELKPDHIGSWINKGIVISEMGREKEALLYYEKALEFDPNET 245

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSE 679
            C   R      +G  ++A+  YD AL+   ++ E       A+  +  AL    +    
Sbjct: 246 HCWNNRGLTMRRLGRLQDAVASYDRALECMPENYE-------AWDNRGYALVKMGRYREA 298

Query: 680 FCWFDIDGDIDP 691
              FD   +++P
Sbjct: 299 MASFDKALEVNP 310



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 107/239 (44%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           DP   + +I +G       + +AA++ F +A++  P  GEAW   G A   L    EAI 
Sbjct: 3   DPKAVKFIIQQGMRCLQGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQRYEEAIA 62

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
              +A    P  A I   RGIV   +    AA+      ++ +  +  A+   G +L  +
Sbjct: 63  SFDQAGVLNPQDASIWLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMIL 122

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G  K+A  +  +AI  + N+ +AW +      +L   + AL+   + L+I     + ++ 
Sbjct: 123 GRNKEALASFDQAIACNPNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWYN 182

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +G LL  L +   AI   +  L + P +I     +      +G  +EA+  Y+ AL+ +
Sbjct: 183 QGCLLMQLQKRDDAIASFNKALELKPDHIGSWINKGIVISEMGREKEALLYYEKALEFD 241



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 42/246 (17%)

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           +P +   + ++G+   +  DF+AAV      VKL  EN  A+T LGLAL  +  Y++A  
Sbjct: 3   DPKAVKFIIQQGMRCLQGGDFDAAVALFQDAVKLTPENGEAWTGLGLALGHLQRYEEAIA 62

Query: 539 AHLKA---------IQLDRNFL-------------------------EAWGHLTQFYQDL 564
           +  +A         I L+R  +                         EAW         L
Sbjct: 63  SFDQAGVLNPQDASIWLNRGIVLSDWGKHEAAIASFDQVIEREPTHPEAWNSRGTSLMIL 122

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             +++AL    Q +  +  + KA+  RG +L  LG+HK A+K     L I P++ E  Y 
Sbjct: 123 GRNKEALASFDQAIACNPNYDKAWSNRGNVLTNLGRHKAALKSFDKALHISPNHPEIWYN 182

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF----YQKEIALYTASKI---- 676
           +      + +  +AI  ++ AL+L+ D +  ++ + +       +KE  LY    +    
Sbjct: 183 QGCLLMQLQKRDDAIASFNKALELKPDHIGSWINKGIVISEMGREKEALLYYEKALEFDP 242

Query: 677 NSEFCW 682
           N   CW
Sbjct: 243 NETHCW 248



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 2/132 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQ 443
           +++GI     G+   A+  +++ L+ DP        RG T R   R L+ A++ +  A++
Sbjct: 215 INKGIVISEMGREKEALLYYEKALEFDPNETHCWNNRGLTMRRLGR-LQDAVASYDRALE 273

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
             P   EAW  RG A   +G   EA+    KALE  P+  + ++ +G           AV
Sbjct: 274 CMPENYEAWDNRGYALVKMGRYREAMASFDKALEVNPDHVNAVYNKGYCYAAQGKVTLAV 333

Query: 504 EDLSACVKLDKE 515
             +   +K++ +
Sbjct: 334 NYIEQAIKVNPQ 345


>gi|145528297|ref|XP_001449948.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417537|emb|CAK82551.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1001

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 161/326 (49%), Gaps = 13/326 (3%)

Query: 369 CV-TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           C+   + K+   SV +   +G +   +GK   AI IFD+ ++ DP Y      +G A   
Sbjct: 313 CIDVALQKNPEYSVGY-FRKGYSLWQQGKNQDAIFIFDKAMQIDPSYASTYNYKGNALND 371

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
            ++   AI  + +AIQ  P+   A+ ++G A + L +  EAI    KA++ +PN A   +
Sbjct: 372 LKQYNEAIVCYDKAIQIYPNDEVAYFKKGNALSDLKQYNEAIVCYDKAIQLDPNDASFYN 431

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G      K +N A+      ++LD  ++  Y   G AL+++ +Y +A   + KAIQ +
Sbjct: 432 NKGNALSDLKQYNEAIVCYDKAIQLDPNDEVNYFNKGNALNNLKQYNEAIVCYDKAIQFN 491

Query: 548 RNFLEAWGHLTQFY--QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +N+  +  H ++ Y   +L   ++A+ C    + ID  ++ AY  +G  LH   Q+K+AI
Sbjct: 492 KNY--SVAHFSKGYALHNLKQYDEAIVCYNNAIKIDPNYTSAYFNKGTTLHNFKQYKEAI 549

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
              S+ + +DPS+      + +    + +Y EAI  YD A+ L+ +         +A+++
Sbjct: 550 VCYSNAIELDPSDASVYTHKGNALSDLKQYNEAIVCYDKAIQLDPNDE-------VAYFK 602

Query: 666 KEIALYTASKINSEFCWFDIDGDIDP 691
           K  AL    + N    ++D    +DP
Sbjct: 603 KGNALSDLKQYNIAIVFYDKAIQLDP 628



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 1/277 (0%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I  +K+ SV    S+G A  N  +Y  AI  ++  +K DP Y  A   +GT     ++ +
Sbjct: 488 IQFNKNYSVA-HFSKGYALHNLKQYDEAIVCYNNAIKIDPNYTSAYFNKGTTLHNFKQYK 546

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI  ++ AI+ +PS    +  +G A + L +  EAI    KA++ +PN      ++G  
Sbjct: 547 EAIVCYSNAIELDPSDASVYTHKGNALSDLKQYNEAIVCYDKAIQLDPNDEVAYFKKGNA 606

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
               K +N A+      ++LD  ++ AY   G AL+ + +YK+A   + KAIQL+ N   
Sbjct: 607 LSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDLKQYKEAIFCYDKAIQLNPNCQV 666

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A+ +     QDL    +++ C  + + ID   ++ Y  +G +LH L  +K A++    G+
Sbjct: 667 AYFNKGNTLQDLQQYNESIACYDKAIEIDPNQAEFYLQKGKVLHDLKNYKDALECYDKGI 726

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            +D S       +    H +  Y EAI  Y+ A+ L+
Sbjct: 727 KLDSSQTLIYNYKGRTLHNLKSYNEAIFYYNNAIKLD 763



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 127/263 (48%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           + +A  N  ++  AI   D  L+++P Y      +G +   Q + + AI  F +A+Q +P
Sbjct: 297 KSVALQNLSEHLDAIQCIDVALQKNPEYSVGYFRKGYSLWQQGKNQDAIFIFDKAMQIDP 356

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S    +  +G A   L +  EAI    KA++  PN      ++G      K +N A+   
Sbjct: 357 SYASTYNYKGNALNDLKQYNEAIVCYDKAIQIYPNDEVAYFKKGNALSDLKQYNEAIVCY 416

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++LD  + S Y   G ALS + +Y +A   + KAIQLD N    + +      +L  
Sbjct: 417 DKAIQLDPNDASFYNNKGNALSDLKQYNEAIVCYDKAIQLDPNDEVNYFNKGNALNNLKQ 476

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+ C  + +  +K +S A+  +G  LH L Q+ +AI   ++ + IDP+     + + 
Sbjct: 477 YNEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQYDEAIVCYNNAIKIDPNYTSAYFNKG 536

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
           +  H   +Y+EAI  Y  A++L+
Sbjct: 537 TTLHNFKQYKEAIVCYSNAIELD 559



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 34/299 (11%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             +G A  +  +Y  AI  +D+ ++ DP    A   +G+A    ++ + AI  + +AIQ 
Sbjct: 601 FKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDLKQYKEAIFCYDKAIQL 660

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+  +G     L +  E+I    KA+E +PN A+   ++G V    K++  A+E
Sbjct: 661 NPNCQVAYFNKGNTLQDLQQYNESIACYDKAIEIDPNQAEFYLQKGKVLHDLKNYKDALE 720

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------L 557
                +KLD      Y Y G  L ++  Y +A   +  AI+LDRN+  A+ +       L
Sbjct: 721 CYDKGIKLDSSQTLIYNYKGRTLHNLKSYNEAIFYYNNAIKLDRNYAMAYNNKGRALHDL 780

Query: 558 TQF---------------------------YQDLANSEKALECLQQVLYIDKRFSKAYHL 590
            Q+                             DL     +L+C    + ID+ F+ AY+ 
Sbjct: 781 KQYNEAIISYDEAIKKDPSLAIAFNNKGRALHDLQKYNDSLQCYDTAIQIDQNFAIAYNN 840

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +G  L+ L Q+  AI      + IDP+       +    H + +Y++AI  YD A+ ++
Sbjct: 841 KGRALYNLKQYTDAIVCYDKAIQIDPNFTIAYNNKGKALHNLKQYKDAIACYDKAIQID 899



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 141/316 (44%), Gaps = 7/316 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             +G A  +  +Y  AI  +D+ ++ DP        +G A +  ++   AI  + +AIQ 
Sbjct: 397 FKKGNALSDLKQYNEAIVCYDKAIQLDPNDASFYNNKGNALSDLKQYNEAIVCYDKAIQL 456

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+    +  +G A   L +  EAI    KA++F  N +     +G      K ++ A+ 
Sbjct: 457 DPNDEVNYFNKGNALNNLKQYNEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQYDEAIV 516

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
             +  +K+D    SAY   G  L +  +YK+A   +  AI+LD +    + H      DL
Sbjct: 517 CYNNAIKIDPNYTSAYFNKGTTLHNFKQYKEAIVCYSNAIELDPSDASVYTHKGNALSDL 576

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               +A+ C  + + +D     AY  +G  L  L Q+  AI      + +DP++    Y 
Sbjct: 577 KQYNEAIVCYDKAIQLDPNDEVAYFKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYK 636

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           + S  + + +Y+EAI  YD A+ L  +         +A++ K   L    + N     +D
Sbjct: 637 KGSALNDLKQYKEAIFCYDKAIQLNPNCQ-------VAYFNKGNTLQDLQQYNESIACYD 689

Query: 685 IDGDIDPLFKEYWCKR 700
              +IDP   E++ ++
Sbjct: 690 KAIEIDPNQAEFYLQK 705



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 124/265 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            ++G A  N  +Y  AI  +D+ ++ +  Y  A   +G A    ++ + AI  +  AI+ 
Sbjct: 465 FNKGNALNNLKQYNEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQYDEAIVCYNNAIKI 524

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+   A+  +G       +  EAI   S A+E +P+ A +   +G      K +N A+ 
Sbjct: 525 DPNYTSAYFNKGTTLHNFKQYKEAIVCYSNAIELDPSDASVYTHKGNALSDLKQYNEAIV 584

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++LD  ++ AY   G ALS + +Y  A   + KAIQLD N   A+        DL
Sbjct: 585 CYDKAIQLDPNDEVAYFKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDL 644

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+ C  + + ++     AY  +G  L  L Q+ ++I      + IDP+  E    
Sbjct: 645 KQYKEAIFCYDKAIQLNPNCQVAYFNKGNTLQDLQQYNESIACYDKAIEIDPNQAEFYLQ 704

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           +    H +  Y++A++ YD  + L+
Sbjct: 705 KGKVLHDLKNYKDALECYDKGIKLD 729



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 136/288 (47%), Gaps = 6/288 (2%)

Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K+I +D     F  ++G A  +  +Y  AI  +D+ ++ DP        +G A    ++ 
Sbjct: 418 KAIQLDPNDASFYNNKGNALSDLKQYNEAIVCYDKAIQLDPNDEVNYFNKGNALNNLKQY 477

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             AI  + +AIQ N +   A   +G A   L +  EAI   + A++ +PN       +G 
Sbjct: 478 NEAIVCYDKAIQFNKNYSVAHFSKGYALHNLKQYDEAIVCYNNAIKIDPNYTSAYFNKGT 537

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
               FK +  A+   S  ++LD  + S YT+ G ALS + +Y +A   + KAIQLD N  
Sbjct: 538 TLHNFKQYKEAIVCYSNAIELDPSDASVYTHKGNALSDLKQYNEAIVCYDKAIQLDPNDE 597

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A+        DL     A+    + + +D     AY+ +G  L+ L Q+K+AI      
Sbjct: 598 VAYFKKGNALSDLKQYNIAIVFYDKAIQLDPNDEVAYYKKGSALNDLKQYKEAIFCYDKA 657

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
           + ++P+     + + +    + +Y E+I  YD A++++ +  E F LQ
Sbjct: 658 IQLNPNCQVAYFNKGNTLQDLQQYNESIACYDKAIEIDPNQAE-FYLQ 704



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 9/225 (4%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI  ++  +K D  Y  A   +G A    ++   AI  + EAI+ +PS   A+  +G
Sbjct: 749 YNEAIFYYNNAIKLDRNYAMAYNNKGRALHDLKQYNEAIISYDEAIKKDPSLAIAFNNKG 808

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           +A   L +  +++Q    A++ + N A   + +G   +  K +  A+      +++D   
Sbjct: 809 RALHDLQKYNDSLQCYDTAIQIDQNFAIAYNNKGRALYNLKQYTDAIVCYDKAIQIDPNF 868

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY--------QDLANSE 568
             AY   G AL ++ +YK A   + KAIQ+D NF  A+ +  Q Y         +L  + 
Sbjct: 869 TIAYNNKGKALHNLKQYKDAIACYDKAIQIDPNFTIAYNNKGQKYLIQLGNALSNLNQNN 928

Query: 569 KALECLQQVLYIDKRFSKAYHLRGL-LLHGLGQHKKAIKDLSSGL 612
            A++C  + + I+   +  Y  +GL  L   GQ    IK+ +  +
Sbjct: 929 DAIDCFNKAININPNDTTNYFQKGLKYLIVQGQFLTNIKNYTQAI 973



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 114/284 (40%), Gaps = 19/284 (6%)

Query: 385 LSRGIAQVNEGKYASA----------------ISIFDQILKEDPM--YPEALIGRGTARA 426
           L +GI  +N+ K+  A                ++   QI+K+  M    +A+I R  A  
Sbjct: 174 LQQGIQLLNQQKWQEANEKITQYIKLSAKQQTLATLFQIIKKIEMNQLGQAIIMRNQAEK 233

Query: 427 FQRELEAAISDFT-EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                   + D++ E +   P+       +  A   L +  +AI+   K L  E      
Sbjct: 234 INNNFYRDLLDYSNEELMKTPNNMVMLIAQSYALCELKQFKQAIEQCEKVLIQESQHLHA 293

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L+ + +      +   A++ +   ++ + E    Y   G +L   G+ + A     KA+Q
Sbjct: 294 LNRKSVALQNLSEHLDAIQCIDVALQKNPEYSVGYFRKGYSLWQQGKNQDAIFIFDKAMQ 353

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +D ++   + +      DL    +A+ C  + + I      AY  +G  L  L Q+ +AI
Sbjct: 354 IDPSYASTYNYKGNALNDLKQYNEAIVCYDKAIQIYPNDEVAYFKKGNALSDLKQYNEAI 413

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
                 + +DP++      + +    + +Y EAI  YD A+ L+
Sbjct: 414 VCYDKAIQLDPNDASFYNNKGNALSDLKQYNEAIVCYDKAIQLD 457


>gi|220925996|ref|YP_002501298.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
 gi|219950603|gb|ACL60995.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium
           nodulans ORS 2060]
          Length = 1056

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 135/281 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A   +G+Y  A++ +DQ L+ DP        RG     + E E AI+D+ +A++ +
Sbjct: 235 NRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLD 294

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG       E  +AI D  +AL  +P  A I   RG       +++ A+ +
Sbjct: 295 PKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIAN 354

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD +  + +   GLA    GEY +A   + +A+QLD      + +    ++   
Sbjct: 355 YDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKG 414

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    Q L +D ++  AY+ RGL+     ++ +AI D    L +DP +      R
Sbjct: 415 EHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNR 474

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
              + + GEY  AI +YD AL L+         + LAFY+K
Sbjct: 475 GDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRK 515



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 135/281 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A   +G+Y  A++ +DQ L+ DP        RG     + E E AI+D+ +A++ +
Sbjct: 371 NRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLD 430

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG       E  +AI D  +AL  +P  A I   RG       +++ A+ +
Sbjct: 431 PKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIAN 490

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD +  + +   GLA    GEY +A   + +A+QLD      + +    ++   
Sbjct: 491 YDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKG 550

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    Q L +D ++  AY+ RGL+    G++ +AI D    L +DP        R
Sbjct: 551 EHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANR 610

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
              + + GEY  AI DYD AL      +  +  + LAFY+K
Sbjct: 611 GDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRK 651



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 9/307 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A ++ G Y  AI+  +Q L+ DP        RG A  F+ E + AI+D+ +A++ +
Sbjct: 31  NRGLASLHNGAYDRAIADLNQALRLDPKSASTYNDRGIAFKFKGEYDRAIADYDQALRLD 90

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
           P     +  RG A  A GE   AI D ++AL   P  +     RG V F+ K + + A+ 
Sbjct: 91  PKDAVFYNNRGNAFGAKGEHDRAIADFNQALTLNPRYSIAYKNRGDV-FRIKGEHDRAIA 149

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++LD + K AY   GL+     EY +A     +A++LD      + +    ++  
Sbjct: 150 DYDQALQLDPKYKLAYNNRGLSFQRKSEYDRAIADFDQALRLDPKDAVIYRNRGDAFRSK 209

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+    Q L +D +++  ++ RGL  +G G++ +A+ D    L +DP        
Sbjct: 210 GEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTN 269

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           R   +   GE+  AI DYD A  L LD   K     LA+  + +     S+ +     FD
Sbjct: 270 RGDVFRIKGEHERAIADYDQA--LRLDPKYK-----LAYNNRGLIFQNKSEYDQAIADFD 322

Query: 685 IDGDIDP 691
               +DP
Sbjct: 323 QALRLDP 329



 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 135/267 (50%), Gaps = 6/267 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
           +RG+   N+ +Y  AI+ FDQ L+ DP   +A+I R    AF+   E + AI+++ +A+Q
Sbjct: 439 NRGLIFQNKSEYDQAIADFDQALRLDPK--DAVIYRNRGDAFRSKGEYDRAIANYDQALQ 496

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAA 502
            +P        RG A    GE   A+ D  +AL+ +P  A +   RG V F+ K + + A
Sbjct: 497 LDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDPKQAVVYTNRGDV-FRIKGEHDRA 555

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D    ++LD +   AY   GL   + GEY +A   + + ++LD  +  A+ +    +Q
Sbjct: 556 IADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANRGDTFQ 615

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                ++A+    Q L  + ++  AY+ RGL  +  G+H +AI D    L +DP +    
Sbjct: 616 SKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAF 675

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLE 649
             R +  +  GEY  AI D D AL L+
Sbjct: 676 NNRGAALNKKGEYDRAITDLDQALRLK 702



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 133/263 (50%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G++  AI+ +DQ L+ DP Y  A   RG     + E + AI+DF +A++ +P     ++
Sbjct: 413 KGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYR 472

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG A  + GE   AI +  +AL+ +P  A + + RG+  ++  ++  A+ D    ++LD
Sbjct: 473 NRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLD 532

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +    YT  G      GE+ +A   + +A++LD  ++ A+ +    +Q+    ++A+  
Sbjct: 533 PKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVD 592

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             Q L +D +++ AY  RG      G++ +AI D    L  +P  +     R   ++  G
Sbjct: 593 YDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKG 652

Query: 634 EYREAIKDYDAALDLELDSMEKF 656
           E+  AI DY+ AL L+  S   F
Sbjct: 653 EHDRAIADYEEALRLDPKSAAAF 675



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 140/314 (44%), Gaps = 34/314 (10%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA   +G+Y  AI+ +DQ L+ DP        RG A   + E + AI+DF +A+  NP
Sbjct: 66  RGIAFKFKGEYDRAIADYDQALRLDPKDAVFYNNRGNAFGAKGEHDRAIADFNQALTLNP 125

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+K RG      GE   AI D  +AL+ +P      + RG+   +  +++ A+ D 
Sbjct: 126 RYSIAYKNRGDVFRIKGEHDRAIADYDQALQLDPKYKLAYNNRGLSFQRKSEYDRAIADF 185

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF--------LEAWGH-- 556
              ++LD ++   Y   G A  S GEY +A   + +A+QLD  +        L  +G   
Sbjct: 186 DQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGE 245

Query: 557 ----LTQFYQDL--------------------ANSEKALECLQQVLYIDKRFSKAYHLRG 592
               L  + Q L                       E+A+    Q L +D ++  AY+ RG
Sbjct: 246 YGRALADYDQALQLDPKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPKYKLAYNNRG 305

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           L+     ++ +AI D    L +DP +      R   + + GEY  AI +YD AL L+   
Sbjct: 306 LIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDSKY 365

Query: 653 MEKFVLQCLAFYQK 666
                 + LAFY K
Sbjct: 366 AAVHNNRGLAFYGK 379



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 128/256 (50%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G++  AI+ +DQ L+ DP Y  A   RG     + E + AI+DF +A++ +P     ++
Sbjct: 277 KGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYR 336

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG A  + GE   AI +  +AL+ +   A + + RG+  +   ++  A+ D    ++LD
Sbjct: 337 NRGDAFRSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLD 396

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +    YT  G      GE+++A   + +A++LD  +  A+ +    +Q+ +  ++A+  
Sbjct: 397 PKQAIVYTNRGDVFRIKGEHERAIADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIAD 456

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             Q L +D + +  Y  RG      G++ +AI +    L +DP        R   ++  G
Sbjct: 457 FDQALRLDPKDAVIYRNRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKG 516

Query: 634 EYREAIKDYDAALDLE 649
           EY  A+ DYD AL L+
Sbjct: 517 EYGRALADYDQALQLD 532



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 137/284 (48%), Gaps = 6/284 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
           +RG+   N+ +Y  AI+ FDQ L+ DP   +A+I R    AF+   E + AI+++ +A+Q
Sbjct: 303 NRGLIFQNKSEYDQAIADFDQALRLDPK--DAVIYRNRGDAFRSKGEYDRAIANYDQALQ 360

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAA 502
            +         RG A    GE   A+ D  +AL+ +P  A +   RG V F+ K +   A
Sbjct: 361 LDSKYAAVHNNRGLAFYGKGEYGRALADYDQALQLDPKQAIVYTNRGDV-FRIKGEHERA 419

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D    ++LD + K AY   GL   +  EY +A     +A++LD      + +    ++
Sbjct: 420 IADYDQALRLDPKYKLAYNNRGLIFQNKSEYDQAIADFDQALRLDPKDAVIYRNRGDAFR 479

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                ++A+    Q L +D +++  ++ RGL  +  G++ +A+ D    L +DP      
Sbjct: 480 SKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLDPKQAVVY 539

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
             R   +   GE+  AI DYD AL L+   +  +  + L F  K
Sbjct: 540 TNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNK 583



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 130/264 (49%), Gaps = 2/264 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  ++G+Y  AI+ +DQ L+ DP Y      RG A   + E   A++D+ +A+Q +
Sbjct: 473 NRGDAFRSKGEYDRAIANYDQALQLDPKYAAVHNNRGLAFYRKGEYGRALADYDQALQLD 532

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG      GE   AI D  +AL  +P      + RG+V     +++ A+ D
Sbjct: 533 PKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVD 592

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQDL 564
               ++LD +   AY   G    S GEY +A   + +A+Q +  ++ A+ G    FY+  
Sbjct: 593 YDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRK- 651

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+   ++ L +D + + A++ RG  L+  G++ +AI DL   L + P      Y 
Sbjct: 652 GEHDRAIADYEEALRLDPKSAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYH 711

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R + +   G+   A+ D + A+ L
Sbjct: 712 RGTAFRHKGDLDRALADLNEAVRL 735



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 2/217 (0%)

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVEDLSAC 509
            ++ RG A    G    AI DL++AL  +P SA   ++RGI  FKFK +++ A+ D    
Sbjct: 28  GYRNRGLASLHNGAYDRAIADLNQALRLDPKSASTYNDRGIA-FKFKGEYDRAIADYDQA 86

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           ++LD ++   Y   G A  + GE+ +A     +A+ L+  +  A+ +    ++     ++
Sbjct: 87  LRLDPKDAVFYNNRGNAFGAKGEHDRAIADFNQALTLNPRYSIAYKNRGDVFRIKGEHDR 146

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A+    Q L +D ++  AY+ RGL      ++ +AI D    L +DP +      R   +
Sbjct: 147 AIADYDQALQLDPKYKLAYNNRGLSFQRKSEYDRAIADFDQALRLDPKDAVIYRNRGDAF 206

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            + GEY  AI +YD AL L+         + LAFY K
Sbjct: 207 RSKGEYDRAIANYDQALQLDSKYAAVHNNRGLAFYGK 243



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 111/223 (49%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G++  AI+ +DQ L+ DP Y  A   RG     + E + AI D+ + ++ +P    A+ 
Sbjct: 549 KGEHDRAIADYDQALRLDPKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYA 608

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG    + GE   AI D  +AL+  P      + RG+  ++  + + A+ D    ++LD
Sbjct: 609 NRGDTFQSKGEYDRAIADYDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLD 668

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            ++ +A+   G AL+  GEY +A     +A++L   F     H    ++   + ++AL  
Sbjct: 669 PKSAAAFNNRGAALNKKGEYDRAITDLDQALRLKPGFANPHYHRGTAFRHKGDLDRALAD 728

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           L + + ++ +++ AY  RG+     G+  +A+ D +  + + P
Sbjct: 729 LNEAVRLNPKYADAYQERGVTFQARGEPDRALADFAEAVRLKP 771



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 2/274 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A   +G+Y  A++ +DQ L+ DP        RG     + E + AI+D+ +A++ +
Sbjct: 507 NRGLAFYRKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALRLD 566

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG      GE   AI D  + L  +P  A     RG       +++ A+ D
Sbjct: 567 PKYIFAYNNRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIAD 626

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++ + +   AY   GLA    GE+ +A   + +A++LD     A+ +         
Sbjct: 627 YDQALQHNPKYVIAYNGRGLAFYRKGEHDRAIADYEEALRLDPKSAAAFNNRGAALNKKG 686

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+  L Q L +   F+  ++ RG      G   +A+ DL+  + ++P   +    R
Sbjct: 687 EYDRAITDLDQALRLKPGFANPHYHRGTAFRHKGDLDRALADLNEAVRLNPKYADAYQER 746

Query: 626 ASCYHAIGEYREAIKDYDAALDL--ELDSMEKFV 657
              + A GE   A+ D+  A+ L  EL++   F+
Sbjct: 747 GVTFQARGEPDRALADFAEAVRLKPELEADATFL 780



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 11/127 (8%)

Query: 11  YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQ 65
           YR  +  + + + D+ +++D   A   T R ++ ++      ++ ++ +A+R LD     
Sbjct: 513 YRKGEYGRALADYDQALQLDPKQAVVYTNRGDVFRIKGEHDRAIADYDQALR-LDPKYIF 571

Query: 66  SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
           +Y      NR   +     +   I D D+ L+LDP    AY  +G  F + G  + A++ 
Sbjct: 572 AYN-----NRGLVFQNKGEYDRAIVDYDQTLRLDPKYAIAYANRGDTFQSKGEYDRAIAD 626

Query: 126 WEKGYEH 132
           +++  +H
Sbjct: 627 YDQALQH 633


>gi|427730483|ref|YP_007076720.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
 gi|427366402|gb|AFY49123.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
          Length = 604

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 125/255 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGI     G Y  AI+ F Q L+  P    A   RG       E + AI+D   AIQ +P
Sbjct: 153 RGIVHNGCGDYPEAIADFQQALQWHPYLAAAYSSRGVVYHNLGEYQQAIADHKRAIQLDP 212

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA+  RG     LG+   AI+D + A+E  PN A   + RG +  + K+++ A+ED 
Sbjct: 213 NLAEAYHNRGNVYYVLGDYPAAIRDYNHAIEINPNLATAYYNRGAIRSRQKEYHLALEDF 272

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +KL+ E+  AY   GL     G+Y+ A   + +A+Q++   +  +G      + L +
Sbjct: 273 NQALKLNPEDAQAYAERGLIREVRGDYQGAIADYNQALQINPYLVLVYGFRANVRRQLGD 332

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              AL    Q+L +  + +  Y  R      LG ++ AI D +  L I+P+ +E  Y RA
Sbjct: 333 YPGALADSNQLLTLHPQLAAGYCDRATARRHLGDYQGAISDYNQALQINPNLVEAYYGRA 392

Query: 627 SCYHAIGEYREAIKD 641
             + A+ ++  AI D
Sbjct: 393 ITHEALQDFLGAIAD 407



 Score =  114 bits (286), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 130/260 (50%), Gaps = 8/260 (3%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI+ F+  ++ +P + EA   RG AR    +   AI+D+ +A+  NP+  E++  RG
Sbjct: 53  YLGAIAFFNLSVEINPHFAEAYYHRGNARYCLADYSRAIADYHQALDINPTFAESYYCRG 112

Query: 457 QARAALGESVEAIQDLSKALEFEP--------NSADILHERGIVNFKFKDFNAAVEDLSA 508
           +A  A+G+  +AI D    +E  P        + A+  + RGIV+    D+  A+ D   
Sbjct: 113 RAYFAVGDYDQAIADYINTIEVNPQLASHINLDIANAYYHRGIVHNGCGDYPEAIADFQQ 172

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++      +AY+  G+   ++GEY++A   H +AIQLD N  EA+ +    Y  L +  
Sbjct: 173 ALQWHPYLAAAYSSRGVVYHNLGEYQQAIADHKRAIQLDPNLAEAYHNRGNVYYVLGDYP 232

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A+      + I+   + AY+ RG +     ++  A++D +  L ++P + +    R   
Sbjct: 233 AAIRDYNHAIEINPNLATAYYNRGAIRSRQKEYHLALEDFNQALKLNPEDAQAYAERGLI 292

Query: 629 YHAIGEYREAIKDYDAALDL 648
               G+Y+ AI DY+ AL +
Sbjct: 293 REVRGDYQGAIADYNQALQI 312



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 147/306 (48%), Gaps = 10/306 (3%)

Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           ++I +D  L+     RG      G Y +AI  ++  ++ +P    A   RG  R+ Q+E 
Sbjct: 206 RAIQLDPNLAEAYHNRGNVYYVLGDYPAAIRDYNHAIEINPNLATAYYNRGAIRSRQKEY 265

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             A+ DF +A++ NP   +A+  RG  R   G+   AI D ++AL+  P    +   R  
Sbjct: 266 HLALEDFNQALKLNPEDAQAYAERGLIREVRGDYQGAIADYNQALQINPYLVLVYGFRAN 325

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V  +  D+  A+ D +  + L  +  + Y     A   +G+Y+ A   + +A+Q++ N +
Sbjct: 326 VRRQLGDYPGALADSNQLLTLHPQLAAGYCDRATARRHLGDYQGAISDYNQALQINPNLV 385

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           EA+      ++ L +   A+    Q +     F+ AY  RG +   LG H+ A+ D +  
Sbjct: 386 EAYYGRAITHEALQDFLGAIADNTQAIRFAPDFAPAYCNRGNVRRQLGDHRGALADYNQA 445

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQK 666
           L I+P+ +E  + R + ++A   Y+EAI DY  AL++   S   +  +  ++     Y +
Sbjct: 446 LAINPNLVESYFNRGALHYAQQNYQEAIADYTQALEINPQSALFYSHRANSYYALNQYHQ 505

Query: 667 EIALYT 672
            IA YT
Sbjct: 506 AIADYT 511



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 127/269 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  +  + +Y  A+  F+Q LK +P   +A   RG  R  + + + AI+D+ +A+Q N
Sbjct: 254 NRGAIRSRQKEYHLALEDFNQALKLNPEDAQAYAERGLIREVRGDYQGAIADYNQALQIN 313

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  R   R  LG+   A+ D ++ L   P  A    +R        D+  A+ D
Sbjct: 314 PYLVLVYGFRANVRRQLGDYPGALADSNQLLTLHPQLAAGYCDRATARRHLGDYQGAISD 373

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++     AY    +   ++ ++  A   + +AI+   +F  A+ +     + L 
Sbjct: 374 YNQALQINPNLVEAYYGRAITHEALQDFLGAIADNTQAIRFAPDFAPAYCNRGNVRRQLG 433

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +   AL    Q L I+    ++Y  RG L +    +++AI D +  L I+P +      R
Sbjct: 434 DHRGALADYNQALAINPNLVESYFNRGALHYAQQNYQEAIADYTQALEINPQSALFYSHR 493

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSME 654
           A+ Y+A+ +Y +AI DY  A+ ++   +E
Sbjct: 494 ANSYYALNQYHQAIADYTQAILIDSSDVE 522



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 123/260 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+ +   G Y  AI+ ++Q L+ +P        R   R    +   A++D  + +  +P
Sbjct: 289 RGLIREVRGDYQGAIADYNQALQINPYLVLVYGFRANVRRQLGDYPGALADSNQLLTLHP 348

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  R  AR  LG+   AI D ++AL+  PN  +  + R I +   +DF  A+ D 
Sbjct: 349 QLAAGYCDRATARRHLGDYQGAISDYNQALQINPNLVEAYYGRAITHEALQDFLGAIADN 408

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++   +   AY   G     +G+++ A   + +A+ ++ N +E++ +    +    N
Sbjct: 409 TQAIRFAPDFAPAYCNRGNVRRQLGDHRGALADYNQALAINPNLVESYFNRGALHYAQQN 468

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++A+    Q L I+ + +  Y  R    + L Q+ +AI D +  + ID S++E  Y R 
Sbjct: 469 YQEAIADYTQALEINPQSALFYSHRANSYYALNQYHQAIADYTQAILIDSSDVEDWYNRG 528

Query: 627 SCYHAIGEYREAIKDYDAAL 646
             +  +G + EA+ D + AL
Sbjct: 529 RSHAQLGNFPEALADLNTAL 548



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 111/222 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R  A+ + G Y  AIS ++Q L+ +P   EA  GR       ++   AI+D T+AI+  P
Sbjct: 357 RATARRHLGDYQGAISDYNQALQINPNLVEAYYGRAITHEALQDFLGAIADNTQAIRFAP 416

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG  R  LG+   A+ D ++AL   PN  +    RG +++  +++  A+ D 
Sbjct: 417 DFAPAYCNRGNVRRQLGDHRGALADYNQALAINPNLVESYFNRGALHYAQQNYQEAIADY 476

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++++ ++   Y++   +  ++ +Y +A   + +AI +D + +E W +  + +  L N
Sbjct: 477 TQALEINPQSALFYSHRANSYYALNQYHQAIADYTQAILIDSSDVEDWYNRGRSHAQLGN 536

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             +AL  L   L     ++ AY LR  +   LG  + AI D 
Sbjct: 537 FPEALADLNTALQRQPYWASAYLLRAEIRRNLGDKEGAISDF 578



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 111/248 (44%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  A++  +Q+L   P        R TAR    + + AISD+ +A+Q NP+  EA+  
Sbjct: 331 GDYPGALADSNQLLTLHPQLAAGYCDRATARRHLGDYQGAISDYNQALQINPNLVEAYYG 390

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R     AL + + AI D ++A+ F P+ A     RG V  +  D   A+ D +  + ++ 
Sbjct: 391 RAITHEALQDFLGAIADNTQAIRFAPDFAPAYCNRGNVRRQLGDHRGALADYNQALAINP 450

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
               +Y   G    +   Y++A   + +A++++      + H    Y  L    +A+   
Sbjct: 451 NLVESYFNRGALHYAQQNYQEAIADYTQALEINPQSALFYSHRANSYYALNQYHQAIADY 510

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + ID    + ++ RG     LG   +A+ DL++ L   P       LRA     +G+
Sbjct: 511 TQAILIDSSDVEDWYNRGRSHAQLGNFPEALADLNTALQRQPYWASAYLLRAEIRRNLGD 570

Query: 635 YREAIKDY 642
              AI D+
Sbjct: 571 KEGAISDF 578



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 69/135 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  +   G +  A++ ++Q L  +P   E+   RG     Q+  + AI+D+T+A++ N
Sbjct: 424 NRGNVRRQLGDHRGALADYNQALAINPNLVESYFNRGALHYAQQNYQEAIADYTQALEIN 483

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +   +  R  +  AL +  +AI D ++A+  + +  +  + RG  + +  +F  A+ D
Sbjct: 484 PQSALFYSHRANSYYALNQYHQAIADYTQAILIDSSDVEDWYNRGRSHAQLGNFPEALAD 543

Query: 506 LSACVKLDKENKSAY 520
           L+  ++      SAY
Sbjct: 544 LNTALQRQPYWASAY 558



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           V+   +RG     +  Y  AI+ + Q L+ +P        R  +     +   AI+D+T+
Sbjct: 453 VESYFNRGALHYAQQNYQEAIADYTQALEINPQSALFYSHRANSYYALNQYHQAIADYTQ 512

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI  + S  E W  RG++ A LG   EA+ DL+ AL+ +P  A     R  +     D  
Sbjct: 513 AILIDSSDVEDWYNRGRSHAQLGNFPEALADLNTALQRQPYWASAYLLRAEIRRNLGDKE 572

Query: 501 AAVEDLSACVKLDKEN 516
            A+ D     ++ +++
Sbjct: 573 GAISDFQQSAEIYQQD 588


>gi|158339013|ref|YP_001520190.1| pentapeptide repeat-containing serine/threonine kinase
           [Acaryochloris marina MBIC11017]
 gi|158309254|gb|ABW30871.1| serine/threonine kinase with pentapeptide repeats [Acaryochloris
           marina MBIC11017]
          Length = 699

 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 135/268 (50%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           V   L +G  +  +G Y  A+  +   +++DP   EA    G  +    +L+ AI+ +T 
Sbjct: 411 VQGHLQQGDQKFAQGDYQRALREYAAAIQKDPENAEAHFNSGITKRRLNDLKGAIAHYTT 470

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI+  P++ +A+  RG  R+ LG+ + AI D ++A+   P      + RG +  +     
Sbjct: 471 AIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQ 530

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           AA+ D S  V++D +   AY   G+  S +G  K A   + + I+L+ N+ +A+ +    
Sbjct: 531 AAIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAISDYSQVIRLNSNYAQAYNNRGIA 590

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y +L N +KA+    Q + +D ++++AY  RG     LG  + AI D +  + ID +  +
Sbjct: 591 YVNLGNLKKAIADYTQAIRVDPKYARAYTNRGTAQLALGNKQAAIADYTQAIDIDSTYAK 650

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
               R +    +G+ +EAI+D   A D+
Sbjct: 651 AYENRGTVKGQLGKKQEAIQDLQKAADI 678



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 156/326 (47%), Gaps = 4/326 (1%)

Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
           +S  ++S+   K  +S+  R    F + +  +++  +   +K    R+S+    S  F L
Sbjct: 322 QSSLEASLPPTKVVESSVDRRSKPFIFYLAPQSNTTSL--QKDSSPRMSRKVVGSALFTL 379

Query: 386 SR--GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           +   GI  V      SA+S     + E     +  + +G  +  Q + + A+ ++  AIQ
Sbjct: 380 TLLGGIGYVVAQGLQSAVSPKAITVAEVNRQVQGHLQQGDQKFAQGDYQRALREYAAAIQ 439

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            +P   EA    G  +  L +   AI   + A+  +P S D  + RG+V  +  D  AA+
Sbjct: 440 KDPENAEAHFNSGITKRRLNDLKGAIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAI 499

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D +  ++L+ ++  AY   G   S +G+ + A   + +A+Q+D  + EA+ +      D
Sbjct: 500 ADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQAAIADYSQAVQIDAQYYEAYFNRGIVQSD 559

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L N++ A+    QV+ ++  +++AY+ RG+    LG  KKAI D +  + +DP       
Sbjct: 560 LGNTKAAISDYSQVIRLNSNYAQAYNNRGIAYVNLGNLKKAIADYTQAIRVDPKYARAYT 619

Query: 624 LRASCYHAIGEYREAIKDYDAALDLE 649
            R +   A+G  + AI DY  A+D++
Sbjct: 620 NRGTAQLALGNKQAAIADYTQAIDID 645



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 1/227 (0%)

Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
           F   + K   N+ K       T I + K  SVD   +RG+ +   G   +AI+ F + ++
Sbjct: 449 FNSGITKRRLNDLKGAIAHYTTAI-RLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIR 507

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
            +P + +A   RGT  +   + +AAI+D+++A+Q +    EA+  RG  ++ LG +  AI
Sbjct: 508 LNPQHVQAYNNRGTIYSEVGKKQAAIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAI 567

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
            D S+ +    N A   + RGI      +   A+ D +  +++D +   AYT  G A  +
Sbjct: 568 SDYSQVIRLNSNYAQAYNNRGIAYVNLGNLKKAIADYTQAIRVDPKYARAYTNRGTAQLA 627

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
           +G  + A   + +AI +D  + +A+ +       L   ++A++ LQ+
Sbjct: 628 LGNKQAAIADYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQK 674



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 59/126 (46%)

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G+Y++A   +  AIQ D    EA  +     + L + + A+      + +      AY+ 
Sbjct: 425 GDYQRALREYAAAIQKDPENAEAHFNSGITKRRLNDLKGAIAHYTTAIRLKPTSVDAYNN 484

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RGL+   LG    AI D +  + ++P +++    R + Y  +G+ + AI DY  A+ ++ 
Sbjct: 485 RGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQAAIADYSQAVQIDA 544

Query: 651 DSMEKF 656
              E +
Sbjct: 545 QYYEAY 550



 Score = 43.1 bits (100), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 16/96 (16%)

Query: 47  CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
            ++ ++S+ IR L+S  AQ+Y      NR   Y  L   K  I D  +A+++DP   +AY
Sbjct: 565 AAISDYSQVIR-LNSNYAQAYN-----NRGIAYVNLGNLKKAIADYTQAIRVDPKYARAY 618

Query: 107 ILKGCAFSALGRKEEAL----------SVWEKGYEH 132
             +G A  ALG K+ A+          S + K YE+
Sbjct: 619 TNRGTAQLALGNKQAAIADYTQAIDIDSTYAKAYEN 654



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 11/125 (8%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLL 63
           ++ RLN     I      +R+      A       R EL  KL ++ ++++AIR+     
Sbjct: 454 TKRRLNDLKGAIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRL----- 508

Query: 64  AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
                +Q   NR   YS++   +  I D  +A+Q+D    +AY  +G   S LG  + A+
Sbjct: 509 -NPQHVQAYNNRGTIYSEVGKKQAAIADYSQAVQIDAQYYEAYFNRGIVQSDLGNTKAAI 567

Query: 124 SVWEK 128
           S + +
Sbjct: 568 SDYSQ 572



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 11/121 (9%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLR----NWSKAIRILDSLLAQSY 67
           L  T   I +  +++R++S  A A   R I    L +L+    ++++AIR+ D   A++Y
Sbjct: 560 LGNTKAAISDYSQVIRLNSNYAQAYNNRGIAYVNLGNLKKAIADYTQAIRV-DPKYARAY 618

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
                 NR      L   +  I D  +A+ +D T  +AY  +G     LG+K+EA+   +
Sbjct: 619 -----TNRGTAQLALGNKQAAIADYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQ 673

Query: 128 K 128
           K
Sbjct: 674 K 674


>gi|359460635|ref|ZP_09249198.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 562

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 130/264 (49%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG+A      Y +A+  ++Q+L+ D   PEA + RG A A      AAI D+ + I+ 
Sbjct: 268 LNRGLAFAAAKNYPAALQDYNQVLQRDAKNPEAYLNRGRAHAASGNHLAAIQDYGQVIKF 327

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P +  A+  RG A + +G++  A+ D SKA++ +P  A  L+ RG+V     +   A+ 
Sbjct: 328 QPKSALAYFNRGVAYSKVGDNATALADYSKAIQLDPKYAAALYNRGLVQLNQGNSQDAIA 387

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +A +++D +  +AY   G A    G  + A     +AI  +     A+ +    +   
Sbjct: 388 DFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTLAYYNRGIAHSTA 447

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             +E A+    QVL +D +F+ AY  RG L    G    A+KD S  +  +P N      
Sbjct: 448 GQNEAAIADYSQVLTLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNN 507

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           RA  + A+ +Y EA+ DY  A  +
Sbjct: 508 RALIHSALRQYEEALSDYQQAAKI 531



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 7/270 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +G+ +  +G +  AI  +D+ ++ +  Y  A + RG A       ++AI+D+T+ IQ 
Sbjct: 197 LRQGVEKYGQGNFKGAIQDYDKAIQINGNYALAYVNRGYAHTVLGNSQSAIADYTKVIQL 256

Query: 445 NPSAGEAWK---RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           NP   E  K    RG A AA      A+QD ++ L+ +  + +    RG  +    +  A
Sbjct: 257 NPKNIELTKIYLNRGLAFAAAKNYPAALQDYNQVLQRDAKNPEAYLNRGRAHAASGNHLA 316

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQ 559
           A++D    +K   ++  AY   G+A S +G+   A   + KAIQLD  +  A  +  L Q
Sbjct: 317 AIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKAIQLDPKYAAALYNRGLVQ 376

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             Q   NS+ A+      + +D +++ AY  RG      G  + AI D +  +  +  + 
Sbjct: 377 LNQ--GNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDT 434

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLE 649
              Y R   +   G+   AI DY   L L+
Sbjct: 435 LAYYNRGIAHSTAGQNEAAIADYSQVLTLD 464



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 130/291 (44%), Gaps = 12/291 (4%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           A + +G  +  Q   + AI D+ +AIQ N +   A+  RG A   LG S  AI D +K +
Sbjct: 195 AHLRQGVEKYGQGNFKGAIQDYDKAIQINGNYALAYVNRGYAHTVLGNSQSAIADYTKVI 254

Query: 477 EFEPNSAD---ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           +  P + +   I   RG+     K++ AA++D +  ++ D +N  AY   G A ++ G +
Sbjct: 255 QLNPKNIELTKIYLNRGLAFAAAKNYPAALQDYNQVLQRDAKNPEAYLNRGRAHAASGNH 314

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
             A + + + I+       A+ +    Y  + ++  AL    + + +D +++ A + RGL
Sbjct: 315 LAAIQDYGQVIKFQPKSALAYFNRGVAYSKVGDNATALADYSKAIQLDPKYAAALYNRGL 374

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
           +    G  + AI D ++ + +D         R + +   G    AI D+  A+    +  
Sbjct: 375 VQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAED- 433

Query: 654 EKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR--LH 702
                  LA+Y + IA  TA +  +    +     +DP F   +  R  LH
Sbjct: 434 ------TLAYYNRGIAHSTAGQNEAAIADYSQVLTLDPKFAAAYTNRGNLH 478



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 5/166 (3%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           SK+I +D + +     RG+ Q+N+G    AI+ F   ++ D  Y  A   RGTA      
Sbjct: 356 SKAIQLDPKYAAALYNRGLVQLNQGNSQDAIADFTASIQMDTKYAAAYKNRGTAHLKAGN 415

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            EAAI+DFT+AI  N     A+  RG A +  G++  AI D S+ L  +P  A     RG
Sbjct: 416 TEAAIADFTQAITFNAEDTLAYYNRGIAHSTAGQNEAAIADYSQVLTLDPKFAAAYTNRG 475

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
            ++    D +AA++D S  ++ + EN +AY    L  S++ +Y++A
Sbjct: 476 NLHAAQGDRDAALKDYSQAIEANPENATAYNNRALIHSALRQYEEA 521



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 11/143 (7%)

Query: 378 SISVDFRLS-----RGIAQVNEGKYASAISIFDQILK---EDPMYPEALIGRGTARAFQR 429
           SI +D + +     RG A +  G   +AI+ F Q +    ED +   A   RG A +   
Sbjct: 392 SIQMDTKYAAAYKNRGTAHLKAGNTEAAIADFTQAITFNAEDTL---AYYNRGIAHSTAG 448

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + EAAI+D+++ +  +P    A+  RG   AA G+   A++D S+A+E  P +A   + R
Sbjct: 449 QNEAAIADYSQVLTLDPKFAAAYTNRGNLHAAQGDRDAALKDYSQAIEANPENATAYNNR 508

Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
            +++   + +  A+ D     K+
Sbjct: 509 ALIHSALRQYEEALSDYQQAAKI 531


>gi|386001554|ref|YP_005919853.1| putative membrane protein, containing TPR repeats [Methanosaeta
           harundinacea 6Ac]
 gi|357209610|gb|AET64230.1| putative membrane protein, containing TPR repeats [Methanosaeta
           harundinacea 6Ac]
          Length = 463

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 168/386 (43%), Gaps = 80/386 (20%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A    G+Y  A++ +D  L+ DP Y  A   +G A +     E A++ +  +++ +
Sbjct: 37  NKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLEID 96

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG    ALG   EA++   +ALE +P  A     +G V +   D+N ++E 
Sbjct: 97  PDYAPAWNNRGVVLEALGRGDEALESYDRALEVDPAYALAWSNQGGVFYSRGDYNRSIEC 156

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG---------- 555
               +++D  ++ A+  LG +L + GEY+++ E + +A+++D  +  AW           
Sbjct: 157 YERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKIDPLYATAWNNKGIALGTLG 216

Query: 556 ------------------HLTQFYQD------LANSEKALECLQQVLYIDKRF------- 584
                             H+   Y        L   E+A+EC   VL +D  +       
Sbjct: 217 RHQEALDCYEEALKIEPSHVMALYNKGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNR 276

Query: 585 ---------------------------SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                                      ++A++ RG+ L  LG+ ++A++     L IDP+
Sbjct: 277 GVALGLLGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALEIDPA 336

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY- 671
             +  Y +   + A+G Y+EAI  YD AL+L+ +  E +      L  L  +Q+ I  Y 
Sbjct: 337 YSQAWYNQGVAFSALGRYQEAISSYDRALELDPELSEAWNNKGIALSALGRHQEAIECYE 396

Query: 672 ------TASKINSEFCWFDIDGDIDP 691
                  AS  N     FDID DI+P
Sbjct: 397 RALEVGLASAGNLTKADFDIDSDINP 422



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 149/299 (49%), Gaps = 7/299 (2%)

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           ++ +   +E+P+YP A   +G A +     E A++ +  A++ +P    AW  +G A +A
Sbjct: 19  AVGEGYAEENPLYPLAWYNKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSA 78

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           LG + EA+   +++LE +P+ A   + RG+V       + A+E     +++D     A++
Sbjct: 79  LGRNEEALACYNRSLEIDPDYAPAWNNRGVVLEALGRGDEALESYDRALEVDPAYALAWS 138

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G    S G+Y ++ E + +A+++D    EAW +L +        E+++E   + L ID
Sbjct: 139 NQGGVFYSRGDYNRSIECYERALEIDPRSREAWNNLGRSLFAAGEYERSIEGYDEALKID 198

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
             ++ A++ +G+ L  LG+H++A+      L I+PS++  LY +      +G   EA++ 
Sbjct: 199 PLYATAWNNKGIALGTLGRHQEALDCYEEALKIEPSHVMALYNKGIALGLLGRQEEAVEC 258

Query: 642 YDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           YDA L ++            A+Y + +AL    +       +D    +DP + + W  R
Sbjct: 259 YDAVLKVDPSYPP-------AWYNRGVALGLLGRQEQAAASYDEALKLDPGYAQAWNNR 310



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 34/212 (16%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C     K +   V    ++GIA    G+   A+  +D +LK DP YP A   RG A    
Sbjct: 224 CYEEALKIEPSHVMALYNKGIALGLLGRQEEAVECYDAVLKVDPSYPPAWYNRGVALGLL 283

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              E A + + EA++ +P   +AW  RG A  +LG   EA+Q   +ALE +P  +   + 
Sbjct: 284 GRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALEIDPAYSQAWYN 343

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G+                                  A S++G Y++A  ++ +A++LD 
Sbjct: 344 QGV----------------------------------AFSALGRYQEAISSYDRALELDP 369

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              EAW +       L   ++A+EC ++ L +
Sbjct: 370 ELSEAWNNKGIALSALGRHQEAIECYERALEV 401



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 11/135 (8%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
           L +  +     DE +++D   A A   R I L  L     +L+++ +A+ I D   +Q++
Sbjct: 283 LGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALEI-DPAYSQAW 341

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
                 N+   +S L  ++  I   D+AL+LDP L +A+  KG A SALGR +EA+  +E
Sbjct: 342 -----YNQGVAFSALGRYQEAISSYDRALELDPELSEAWNNKGIALSALGRHQEAIECYE 396

Query: 128 KGYEHALHQSADLKQ 142
           +  E  L  + +L +
Sbjct: 397 RALEVGLASAGNLTK 411



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 33/58 (56%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           N+    S+L  ++  +   D AL+LDP    A+  KG A SALGR EEAL+ + +  E
Sbjct: 37  NKGVALSELGRYEEAVASYDNALELDPEYALAWNNKGIALSALGRNEEALACYNRSLE 94



 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 31/58 (53%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           NR      L   +      D+AL+LDP   QA+  +G A  +LGR+EEAL  +++  E
Sbjct: 275 NRGVALGLLGRQEQAAASYDEALKLDPGYAQAWNNRGIALGSLGRQEEALQSYQRALE 332


>gi|427737387|ref|YP_007056931.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
 gi|427372428|gb|AFY56384.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
          Length = 671

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 133/261 (50%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G++  AI  ++Q +K +P Y +A  GRG AR   +E   AI+D  +AI   P   +A+ +
Sbjct: 396 GEFNGAIIDYNQAIKLNPEYADAYYGRGLARHEIKENRKAIADLNQAIAIKPKFTKAYFQ 455

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG     +G+ +EAI+D SKA+E  P  A   +ERG   +   +  AA +D +  ++LD 
Sbjct: 456 RGIVHREIGDKLEAIKDFSKAIEINPKYASAYYERGKTRYALNEKAAAKKDFTKVIELDS 515

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
               AY       + +G  K+A + + KAI+++    +A+ H  ++   + + E A+E  
Sbjct: 516 RFVDAYIARADVHTDLGYPKQAYDDYEKAIEMNPEDAKAYVHRGKYRFQMKDIEGAIENY 575

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + ++   S AY+ RG     LG+  KA+ D S  + ++P      Y R      + +
Sbjct: 576 NQAIKLNSTQSTAYNNRGNAYLELGKWNKALADYSKAIELNPEYASAYYNRGLLRTDLAK 635

Query: 635 YREAIKDYDAALDLELDSMEK 655
              AI+DY AA D+ L   EK
Sbjct: 636 VPGAIEDYQAAADIFLKRGEK 656



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 123/248 (49%)

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
           +D  Y   L  +G A   + + + A+  F++AI+ NP    A+  RG A   LG   ++ 
Sbjct: 309 KDLNYARKLYYQGIANYEKADYKQAVKLFSQAIKINPQYSSAYNFRGDAYYRLGNYEKSQ 368

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
           QD S A+   P  A+  ++R    +   +FN A+ D +  +KL+ E   AY   GLA   
Sbjct: 369 QDSSAAIRNNPQDANAYYDRAFSLYLVGEFNGAIIDYNQAIKLNPEYADAYYGRGLARHE 428

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           I E +KA     +AI +   F +A+      ++++ +  +A++   + + I+ +++ AY+
Sbjct: 429 IKENRKAIADLNQAIAIKPKFTKAYFQRGIVHREIGDKLEAIKDFSKAIEINPKYASAYY 488

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            RG   + L +   A KD +  + +D   ++    RA  +  +G  ++A  DY+ A+++ 
Sbjct: 489 ERGKTRYALNEKAAAKKDFTKVIELDSRFVDAYIARADVHTDLGYPKQAYDDYEKAIEMN 548

Query: 650 LDSMEKFV 657
            +  + +V
Sbjct: 549 PEDAKAYV 556



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 4/219 (1%)

Query: 360 NEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
           +E K N+K  +  ++++ +I   F      RGI     G    AI  F + ++ +P Y  
Sbjct: 427 HEIKENRK-AIADLNQAIAIKPKFTKAYFQRGIVHREIGDKLEAIKDFSKAIEINPKYAS 485

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           A   RG  R    E  AA  DFT+ I+ +    +A+  R      LG   +A  D  KA+
Sbjct: 486 AYYERGKTRYALNEKAAAKKDFTKVIELDSRFVDAYIARADVHTDLGYPKQAYDDYEKAI 545

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           E  P  A     RG   F+ KD   A+E+ +  +KL+    +AY   G A   +G++ KA
Sbjct: 546 EMNPEDAKAYVHRGKYRFQMKDIEGAIENYNQAIKLNSTQSTAYNNRGNAYLELGKWNKA 605

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              + KAI+L+  +  A+ +      DLA    A+E  Q
Sbjct: 606 LADYSKAIELNPEYASAYYNRGLLRTDLAKVPGAIEDYQ 644



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 70/142 (49%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T++ +  S  VD  ++R     + G    A   +++ ++ +P   +A + RG  R   ++
Sbjct: 508 TKVIELDSRFVDAYIARADVHTDLGYPKQAYDDYEKAIEMNPEDAKAYVHRGKYRFQMKD 567

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           +E AI ++ +AI+ N +   A+  RG A   LG+  +A+ D SKA+E  P  A   + RG
Sbjct: 568 IEGAIENYNQAIKLNSTQSTAYNNRGNAYLELGKWNKALADYSKAIELNPEYASAYYNRG 627

Query: 491 IVNFKFKDFNAAVEDLSACVKL 512
           ++         A+ED  A   +
Sbjct: 628 LLRTDLAKVPGAIEDYQAAADI 649


>gi|386000858|ref|YP_005919157.1| hypothetical protein Mhar_0143 [Methanosaeta harundinacea 6Ac]
 gi|357208914|gb|AET63534.1| TPR repeat-containing protein [Methanosaeta harundinacea 6Ac]
          Length = 609

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GIA  N+G Y  A   FD+ ++ DP Y  A   +G A + +     AI  + EAI+ +
Sbjct: 96  NKGIALGNQGNYTEATRCFDEAIRLDPEYAGAWYNKGKALSERGNYTGAILAYDEAIRLD 155

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW ++G A    G   EAIQ   +A+  +P  A   + +G+      ++  A+  
Sbjct: 156 PELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNKGVALGMQGNYAEAIPA 215

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD E+  A+   G AL+ +G+Y +A  A  KAI+LD      W +  +      
Sbjct: 216 YDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKG 275

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N  +A++   + + +D   + A+  +G +L   G++ +AI+     + + P+ ++    +
Sbjct: 276 NYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLHPNYVDAWINK 335

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            S  +  G Y EAI+ YD A+ L+ D+        + +Y K  AL            +D 
Sbjct: 336 GSALYEQGNYPEAIQAYDEAIRLDPDN-------AMTWYNKGNALSELGNYTEGILAYDE 388

Query: 686 DGDIDPLFKEYWCKR 700
              +DP   + W  +
Sbjct: 389 AIRLDPEEADVWVSK 403



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 145/296 (48%), Gaps = 5/296 (1%)

Query: 373 ISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           ++  ++I +D  L+     +G A    G Y  AI  FD+ ++ DP        +G A   
Sbjct: 146 LAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQAFDEAIRLDPEDATTWYNKGVALGM 205

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q     AI  + EAI+ +P   +AW  RG A   LG+  EAI  L KA+E +P  A   +
Sbjct: 206 QGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELGKYDEAIHALDKAIELDPEDAAPWN 265

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G   +   ++  A++     ++LD E   A++  G  L+  G+Y +A +A+ +AI+L 
Sbjct: 266 NKGKPLWMKGNYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLH 325

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            N+++AW +      +  N  +A++   + + +D   +  ++ +G  L  LG + + I  
Sbjct: 326 PNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILA 385

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
               + +DP   +    + + +   G+Y EAI+ YD A+ L+ +  + +V +  +F
Sbjct: 386 YDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSF 441



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 137/281 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A   +G Y  +I  +D+ ++ DP +  A   +G A   Q     A   F EAI+ +
Sbjct: 62  NKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAIRLD 121

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  +G+A +  G    AI    +A+  +P  A   H++G   F+  ++  A++ 
Sbjct: 122 PEYAGAWYNKGKALSERGNYTGAILAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQA 181

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD E+ + +   G+AL   G Y +A  A+ +AI+LD    +AW +      +L 
Sbjct: 182 FDEAIRLDPEDATTWYNKGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELG 241

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+  L + + +D   +  ++ +G  L   G + +AI+     + +DP        +
Sbjct: 242 KYDEAIHALDKAIELDPEDAAPWNNKGKPLWMKGNYTEAIQAFDEAIRLDPELAVAWSNK 301

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            +     G+Y EAI+ YD A+ L  + ++ ++ +  A Y++
Sbjct: 302 GTVLADQGKYDEAIQAYDEAIRLHPNYVDAWINKGSALYEQ 342



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 119/256 (46%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G Y  AI  FD+ ++ DP Y +A   +G    ++     A+  + EAI+ +P    AW 
Sbjct: 2   QGNYTMAIEAFDEAIRLDPEYADAWYSKGLTLYYRGNYTEAVQAYDEAIRLDPEYASAWN 61

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            +G A    G   E+I+   +A+  +P  A   + +GI      ++  A       ++LD
Sbjct: 62  NKGLALDYQGNYDESIKAYDEAIRLDPEFAAAWNNKGIALGNQGNYTEATRCFDEAIRLD 121

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            E   A+   G ALS  G Y  A  A+ +AI+LD     AW        +  N  +A++ 
Sbjct: 122 PEYAGAWYNKGKALSERGNYTGAILAYDEAIRLDPELAAAWHKKGDALFERGNYTEAIQA 181

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             + + +D   +  ++ +G+ L   G + +AI      + +DP + +    R +  + +G
Sbjct: 182 FDEAIRLDPEDATTWYNKGVALGMQGNYAEAIPAYDEAIRLDPEDADAWNNRGNALNELG 241

Query: 634 EYREAIKDYDAALDLE 649
           +Y EAI   D A++L+
Sbjct: 242 KYDEAIHALDKAIELD 257



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 136/297 (45%), Gaps = 8/297 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI  FD+ ++ DP    A   +GT  A Q + + AI  + EAI+ +P+  +AW  
Sbjct: 275 GNYTEAIQAFDEAIRLDPELAVAWSNKGTVLADQGKYDEAIQAYDEAIRLHPNYVDAWIN 334

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A    G   EAIQ   +A+  +P++A   + +G    +  ++   +      ++LD 
Sbjct: 335 KGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILAYDEAIRLDP 394

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           E    +   G +    G+Y +A +A+ +AI+LD    + W      ++     ++A++  
Sbjct: 395 EEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAY 454

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + + +D   +  +  +G      G++ +AI+     + +DP      Y + +  +   +
Sbjct: 455 DEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEFAGAWYNKGNALYEQDK 514

Query: 635 YREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKINSEFC--WF 683
           Y EAI+ YD A+ L  D  E +      L     Y + I  Y  A +++ EF   WF
Sbjct: 515 YDEAIQAYDEAIRLNPDYKEAWNNKGNALVMQGKYDEAIQAYDEAIRLDPEFAYPWF 571



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 128/269 (47%), Gaps = 2/269 (0%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD  +++G A   +G Y  AI  +D+ ++ DP        +G A +        I  + E
Sbjct: 329 VDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNAMTWYNKGNALSELGNYTEGILAYDE 388

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD-F 499
           AI+ +P   + W  +G +    G+  EAIQ   +A+  +P  AD+   +G  +F+ +  +
Sbjct: 389 AIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKG-NSFRMQGKY 447

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           + A++     ++LD E    +   G +    G+Y +A +A+ +AI+LD  F  AW +   
Sbjct: 448 DEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEFAGAWYNKGN 507

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +    ++A++   + + ++  + +A++ +G  L   G++ +AI+     + +DP   
Sbjct: 508 ALYEQDKYDEAIQAYDEAIRLNPDYKEAWNNKGNALVMQGKYDEAIQAYDEAIRLDPEFA 567

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDL 648
              + +      +G+  EA + Y  A +L
Sbjct: 568 YPWFSKGVVLEYLGKVAEANEAYAKAEEL 596



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 104/206 (50%), Gaps = 3/206 (1%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D  +S+G +   +GKY  AI  +D+ ++ DP   +  + +G +   Q + + AI  + E
Sbjct: 397 ADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDE 456

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI+ +P   + W  +G +    G+  EAIQ   +A+  +P  A   + +G   ++   ++
Sbjct: 457 AIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEFAGAWYNKGNALYEQDKYD 516

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHL 557
            A++     ++L+ + K A+   G AL   G+Y +A +A+ +AI+LD  F   W   G +
Sbjct: 517 EAIQAYDEAIRLNPDYKEAWNNKGNALVMQGKYDEAIQAYDEAIRLDPEFAYPWFSKGVV 576

Query: 558 TQFYQDLANSEKALECLQQVLYIDKR 583
            ++   +A + +A    +++ Y   R
Sbjct: 577 LEYLGKVAEANEAYAKAEELGYSTGR 602


>gi|414078285|ref|YP_006997603.1| hypothetical protein ANA_C13102 [Anabaena sp. 90]
 gi|413971701|gb|AFW95790.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 1342

 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 174/362 (48%), Gaps = 16/362 (4%)

Query: 326  ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
            + Y+++   D+++++S   R+ + +K    K+  ++  +     V +I    +    +  
Sbjct: 926  DDYTQAIKIDSQNANSYAIRAGIYYKLKEYKQAIDDYNQ-----VIQIDPQNAT---YYG 977

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG A     +Y  AI+ + Q++K DP        RG      +E   AI+D+T+AI+ +
Sbjct: 978  ARGFAYFKLKEYKQAINDWSQVIKFDPKDATYYGLRGNTYLLSKEYRQAINDYTQAIKID 1037

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P     +  RG A   L +  +AI + ++A++ +P    I++ RG    + K++  A++D
Sbjct: 1038 PKNANYYSGRGIAHHFLEDYKQAIDNYTEAIKIDPKK--IINLRGAAYLQLKEYKLAIDD 1095

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  ++LD +N   Y   G A   + +YK+A   +  AIQLD      +G     Y  L 
Sbjct: 1096 YNQAIQLDPKNAIYYGTRGDAYLQLKDYKQAINDYTHAIQLDPKNAIYYGTRGFAYLQLK 1155

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            + + A+    Q + ID + +  Y  RG     L  HK+AI D +  + + P   E  Y+R
Sbjct: 1156 DYKLAINDYTQAIKIDPKNATYYSARGDAYFQLKDHKQAIDDYTQAIKLKPDFTEAYYVR 1215

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK---EIAL---YTASKINSE 679
               ++ + +Y++AI D++ A+ L+ D  E +    +  Y+    E A+     A KINS 
Sbjct: 1216 GIAHYFLKDYKQAIDDWNQAIKLKPDYPEAYTNLGIVSYEMGEVETAINYWRNAIKINSN 1275

Query: 680  FC 681
            F 
Sbjct: 1276 FA 1277



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 156/351 (44%), Gaps = 41/351 (11%)

Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAI 401
           R +L F  D   E            +T   K+ ++S    D    RG       ++  AI
Sbjct: 612 RGRLLFTLDKYSE-----------ALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAI 660

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
             ++Q +K +P++  A   R  +    +    AI+D T+AIQ +P    ++  RG     
Sbjct: 661 EAYNQSIKINPLFKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDAVSYNFRGLLYGQ 720

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           L E  ++I D ++A++ +P +A   + RGI     K++  A+ D +  ++LD +N   Y 
Sbjct: 721 LEEYKQSIADSTQAIQLDPKNAKYYNSRGIAYEGLKEYKQAINDYTQAIQLDPKNAKYYN 780

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G+A S + +YK+    + +AIQLD      +G     Y +L + ++A+    Q + +D
Sbjct: 781 SRGIAYSQLKDYKQVIADYTQAIQLDPKDATYYGMRGGAYSELKDYKQAIADYTQAIQLD 840

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN----------------------- 618
            + +  Y LRGL    L  +K+AI DL+  +  DP N                       
Sbjct: 841 PKDAIYYSLRGLAYSKLKDYKQAISDLTETIRRDPKNAPYTMQGLRYSEFKDIKGFLSGY 900

Query: 619 ---IECLY-LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
              +  +Y  R   Y+ + EY+ AI DY  A+ ++  +   + ++   +Y+
Sbjct: 901 TGFMSTVYRTRGGIYYELKEYKLAIDDYTQAIKIDSQNANSYAIRAGIYYK 951



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 143/291 (49%), Gaps = 23/291 (7%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KYA A    ++ + + P + +A   +G     +++   +I+ + +A++ NP+  +AWK R
Sbjct: 553 KYAEARKAVNKAIAKKPDFYQAWYFKGVIFDSEKKYPESIAAYDKALKINPNFAQAWKDR 612

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G+    L +  EA+    KA+   PN  D+ + RG      K F  A+E  +  +K++  
Sbjct: 613 GRLLFTLDKYSEALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAIEAYNQSIKINPL 672

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------RNFLEAWGHLTQFYQDLAN 566
            K AY     +   +  Y++A     +AIQLD         R  L  +G L ++ Q +A+
Sbjct: 673 FKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDAVSYNFRGLL--YGQLEEYKQSIAD 730

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           S +A++       +D + +K Y+ RG+   GL ++K+AI D +  + +DP N +    R 
Sbjct: 731 STQAIQ-------LDPKNAKYYNSRGIAYEGLKEYKQAINDYTQAIQLDPKNAKYYNSRG 783

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT 672
             Y  + +Y++ I DY  A+ L+      + ++  A+     Y++ IA YT
Sbjct: 784 IAYSQLKDYKQVIADYTQAIQLDPKDATYYGMRGGAYSELKDYKQAIADYT 834



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/332 (25%), Positives = 158/332 (47%), Gaps = 32/332 (9%)

Query: 366 KKFCVTRISKSKSISVD--FRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           K+F     + ++SI ++  F+ +   R  + V    Y  AI+   Q ++ DP    +   
Sbjct: 654 KRFPEAIEAYNQSIKINPLFKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDAVSYNF 713

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG       E + +I+D T+AIQ +P   + +  RG A   L E  +AI D ++A++ +P
Sbjct: 714 RGLLYGQLEEYKQSIADSTQAIQLDPKNAKYYNSRGIAYEGLKEYKQAINDYTQAIQLDP 773

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            +A   + RGI   + KD+   + D +  ++LD ++ + Y   G A S + +YK+A   +
Sbjct: 774 KNAKYYNSRGIAYSQLKDYKQVIADYTQAIQLDPKDATYYGMRGGAYSELKDYKQAIADY 833

Query: 541 LKAIQLD-----------------RNFLEAWGHLTQ-FYQDLANSEKALECLQQVLYIDK 582
            +AIQLD                 +++ +A   LT+   +D  N+   ++ L+   + D 
Sbjct: 834 TQAIQLDPKDAIYYSLRGLAYSKLKDYKQAISDLTETIRRDPKNAPYTMQGLRYSEFKDI 893

Query: 583 R---------FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
           +          S  Y  RG + + L ++K AI D +  + ID  N     +RA  Y+ + 
Sbjct: 894 KGFLSGYTGFMSTVYRTRGGIYYELKEYKLAIDDYTQAIKIDSQNANSYAIRAGIYYKLK 953

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           EY++AI DY+  + ++  +   +  +  A+++
Sbjct: 954 EYKQAIDDYNQVIQIDPQNATYYGARGFAYFK 985



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 155/310 (50%), Gaps = 5/310 (1%)

Query: 359 SNEAKRNKKFCVTRISKSKSIS--VDFRLS---RGIAQVNEGKYASAISIFDQILKEDPM 413
           +N+  R++K+   R + +K+I+   DF  +   +G+   +E KY  +I+ +D+ LK +P 
Sbjct: 545 ANQLWRSQKYAEARKAVNKAIAKKPDFYQAWYFKGVIFDSEKKYPESIAAYDKALKINPN 604

Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
           + +A   RG       +   A++ F +AI  +P+  + +  RG     L    EAI+  +
Sbjct: 605 FAQAWKDRGRLLFTLDKYSEALTSFDKAITLSPNQFDLYYWRGFTLHYLKRFPEAIEAYN 664

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           ++++  P      + R     + K++  A+ DL+  ++LD ++  +Y + GL    + EY
Sbjct: 665 QSIKINPLFKFAYNVRSFSYVELKNYRQAITDLTQAIQLDPKDAVSYNFRGLLYGQLEEY 724

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           K++     +AIQLD    + +      Y+ L   ++A+    Q + +D + +K Y+ RG+
Sbjct: 725 KQSIADSTQAIQLDPKNAKYYNSRGIAYEGLKEYKQAINDYTQAIQLDPKNAKYYNSRGI 784

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
               L  +K+ I D +  + +DP +     +R   Y  + +Y++AI DY  A+ L+    
Sbjct: 785 AYSQLKDYKQVIADYTQAIQLDPKDATYYGMRGGAYSELKDYKQAIADYTQAIQLDPKDA 844

Query: 654 EKFVLQCLAF 663
             + L+ LA+
Sbjct: 845 IYYSLRGLAY 854



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 2/280 (0%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG   +   +Y  AI+ + Q +K DP       GRG A  F  + + AI ++TEAI+ +P
Sbjct: 1013 RGNTYLLSKEYRQAINDYTQAIKIDPKNANYYSGRGIAHHFLEDYKQAIDNYTEAIKIDP 1072

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               +    RG A   L E   AI D ++A++ +P +A     RG    + KD+  A+ D 
Sbjct: 1073 K--KIINLRGAAYLQLKEYKLAIDDYNQAIQLDPKNAIYYGTRGDAYLQLKDYKQAINDY 1130

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            +  ++LD +N   Y   G A   + +YK A   + +AI++D      +      Y  L +
Sbjct: 1131 THAIQLDPKNAIYYGTRGFAYLQLKDYKLAINDYTQAIKIDPKNATYYSARGDAYFQLKD 1190

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             ++A++   Q + +   F++AY++RG+  + L  +K+AI D +  + + P   E      
Sbjct: 1191 HKQAIDDYTQAIKLKPDFTEAYYVRGIAHYFLKDYKQAIDDWNQAIKLKPDYPEAYTNLG 1250

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
               + +GE   AI  +  A+ +  +  E  +   +A Y K
Sbjct: 1251 IVSYEMGEVETAINYWRNAIKINSNFAEAHLALGVALYGK 1290



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 116/229 (50%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG A +   +Y  AI  ++Q ++ DP        RG A    ++ + AI+D+T AIQ +P
Sbjct: 1079 RGAAYLQLKEYKLAIDDYNQAIQLDPKNAIYYGTRGDAYLQLKDYKQAINDYTHAIQLDP 1138

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                 +  RG A   L +   AI D ++A++ +P +A     RG   F+ KD   A++D 
Sbjct: 1139 KNAIYYGTRGFAYLQLKDYKLAINDYTQAIKIDPKNATYYSARGDAYFQLKDHKQAIDDY 1198

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            +  +KL  +   AY   G+A   + +YK+A +   +AI+L  ++ EA+ +L     ++  
Sbjct: 1199 TQAIKLKPDFTEAYYVRGIAHYFLKDYKQAIDDWNQAIKLKPDYPEAYTNLGIVSYEMGE 1258

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
             E A+   +  + I+  F++A+   G+ L+G G  +  +K   + L +D
Sbjct: 1259 VETAINYWRNAIKINSNFAEAHLALGVALYGKGDQEAGLKSAETALKLD 1307



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 128/290 (44%), Gaps = 29/290 (10%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG A      Y  AI+ + Q ++ DP        RG A +  ++ + AISD TE I+ +P
Sbjct: 816  RGGAYSELKDYKQAIADYTQAIQLDPKDAIYYSLRGLAYSKLKDYKQAISDLTETIRRDP 875

Query: 447  SAGE---------------------------AWKRRGQARAALGESVEAIQDLSKALEFE 479
                                            ++ RG     L E   AI D ++A++ +
Sbjct: 876  KNAPYTMQGLRYSEFKDIKGFLSGYTGFMSTVYRTRGGIYYELKEYKLAIDDYTQAIKID 935

Query: 480  PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
              +A+    R  + +K K++  A++D +  +++D +N + Y   G A   + EYK+A   
Sbjct: 936  SQNANSYAIRAGIYYKLKEYKQAIDDYNQVIQIDPQNATYYGARGFAYFKLKEYKQAIND 995

Query: 540  HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
              + I+ D      +G     Y       +A+    Q + ID + +  Y  RG+  H L 
Sbjct: 996  WSQVIKFDPKDATYYGLRGNTYLLSKEYRQAINDYTQAIKIDPKNANYYSGRGIAHHFLE 1055

Query: 600  QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             +K+AI + +  + IDP  I  + LR + Y  + EY+ AI DY+ A+ L+
Sbjct: 1056 DYKQAIDNYTEAIKIDPKKI--INLRGAAYLQLKEYKLAIDDYNQAIQLD 1103



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 112/222 (50%), Gaps = 5/222 (2%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG A +    Y  AI+ +   ++ DP        RG A    ++ + AI+D+T+AI+ +
Sbjct: 1112 TRGDAYLQLKDYKQAINDYTHAIQLDPKNAIYYGTRGFAYLQLKDYKLAINDYTQAIKID 1171

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P     +  RG A   L +  +AI D ++A++ +P+  +  + RGI ++  KD+  A++D
Sbjct: 1172 PKNATYYSARGDAYFQLKDHKQAIDDYTQAIKLKPDFTEAYYVRGIAHYFLKDYKQAIDD 1231

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  +KL  +   AYT LG+    +GE + A      AI+++ NF EA   L        
Sbjct: 1232 WNQAIKLKPDYPEAYTNLGIVSYEMGEVETAINYWRNAIKINSNFAEAHLALGVALYGKG 1291

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            + E  L+  +  L +DKR+ K   L+    +G G+  K IKD
Sbjct: 1292 DQEAGLKSAETALKLDKRYGKIEFLKE---NGWGE--KLIKD 1328



 Score = 43.1 bits (100), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 6/77 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++ ++++AI+ LD   A+ Y      +R   YSQL+ +K VI D  +A+QLDP     Y 
Sbjct: 761 AINDYTQAIQ-LDPKNAKYYN-----SRGIAYSQLKDYKQVIADYTQAIQLDPKDATYYG 814

Query: 108 LKGCAFSALGRKEEALS 124
           ++G A+S L   ++A++
Sbjct: 815 MRGGAYSELKDYKQAIA 831


>gi|422301645|ref|ZP_16389012.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
 gi|389789312|emb|CCI14645.1| Tetratricopeptide repeat protein [Microcystis aeruginosa PCC 9806]
          Length = 642

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 141/306 (46%), Gaps = 7/306 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G++  AI+ +DQ L+  P Y EA   RG A      L  AI+ + +A++  
Sbjct: 189 NRGIALDNLGRFEEAIASYDQALEFKPDYHEAWNNRGIALDNLGRLAEAIASYDKALEIK 248

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   E I    +ALE +P+  +  + RG        F  A+  
Sbjct: 249 PDKHEAWYNRGNALGNLGRFAEEIASYGRALEIKPDKHEAWYNRGNALGNLGRFEQAIAS 308

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  ++  A+   G+AL ++G  ++A  ++ +A+++  +F  AW +      +L 
Sbjct: 309 YDKALEIKPDDHLAWYNRGVALGNLGRLEEAIASYDQALEIKPDFHLAWTNRGVALGNLG 368

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    Q L I   F  A+  RG  L  LG+  +AI      L I P   +    R
Sbjct: 369 RLEEAIASYDQALKIQPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNR 428

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            +    +G + E I  YD AL+ + D  E       A+Y + +AL    +   E   +D 
Sbjct: 429 GAALVNLGRWAEEIASYDRALEFKPDYHE-------AWYNRGVALANLGRWAEEIASYDK 481

Query: 686 DGDIDP 691
             +I P
Sbjct: 482 ALEIKP 487



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 3/292 (1%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    ++  I  DF L+   RG+A  N G+   AI+ +DQ LK  P +  A   RG A 
Sbjct: 339 AIASYDQALEIKPDFHLAWTNRGVALGNLGRLEEAIASYDQALKIQPDFHLAWTNRGAAL 398

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                   AI+    A+   P   +AW  RG A   LG   E I    +ALEF+P+  + 
Sbjct: 399 VNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLGRWAEEIASYDRALEFKPDYHEA 458

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG+       +   +      +++  ++  A+   G+AL+++G +++A  ++ + ++
Sbjct: 459 WYNRGVALANLGRWAEEIASYDKALEIKPDDHLAWYNRGIALANLGRFEQAIASYDRVLE 518

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +  +F  AW        +L   E+AL    Q L I   F  A+  RG  L  LG+  +AI
Sbjct: 519 IKPDFHPAWSDRGIVLDNLGRFEEALASCDQALAIKPDFHLAWTNRGAALVNLGRWAEAI 578

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                 L I P   +    R +    +G + EAI   D AL+++ D  E + 
Sbjct: 579 ASCDRALAIKPDLHQAWTNRGAALVNLGRWAEAIASCDRALEIKPDYHEAWT 630



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 137/318 (43%), Gaps = 7/318 (2%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           F   +G  +   G +  AI+ +DQ L+  P   EA   RG A       E AI+ + +A+
Sbjct: 152 FWFEQGYQKYTNGDFIGAIASYDQALEIKPDVHEAWNNRGIALDNLGRFEEAIASYDQAL 211

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +  P   EAW  RG A   LG   EAI    KALE +P+  +  + RG        F   
Sbjct: 212 EFKPDYHEAWNNRGIALDNLGRLAEAIASYDKALEIKPDKHEAWYNRGNALGNLGRFAEE 271

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +      +++  +   A+   G AL ++G +++A  ++ KA+++  +   AW +      
Sbjct: 272 IASYGRALEIKPDKHEAWYNRGNALGNLGRFEQAIASYDKALEIKPDDHLAWYNRGVALG 331

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +L   E+A+    Q L I   F  A+  RG+ L  LG+ ++AI      L I P      
Sbjct: 332 NLGRLEEAIASYDQALEIKPDFHLAWTNRGVALGNLGRLEEAIASYDQALKIQPDFHLAW 391

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCW 682
             R +    +G + EAI   D AL ++ D  +       A+  +  AL    +   E   
Sbjct: 392 TNRGAALVNLGRWAEAIASCDRALAIKPDLHQ-------AWTNRGAALVNLGRWAEEIAS 444

Query: 683 FDIDGDIDPLFKEYWCKR 700
           +D   +  P + E W  R
Sbjct: 445 YDRALEFKPDYHEAWYNR 462



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 10/335 (2%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    K+  I  D  L+   RG+A  N G+   AI+ +DQ L+  P +  A   RG A 
Sbjct: 305 AIASYDKALEIKPDDHLAWYNRGVALGNLGRLEEAIASYDQALEIKPDFHLAWTNRGVAL 364

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                LE AI+ + +A++  P    AW  RG A   LG   EAI    +AL  +P+    
Sbjct: 365 GNLGRLEEAIASYDQALKIQPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQA 424

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
              RG        +   +      ++   +   A+   G+AL+++G + +   ++ KA++
Sbjct: 425 WTNRGAALVNLGRWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALE 484

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +  +   AW +      +L   E+A+    +VL I   F  A+  RG++L  LG+ ++A+
Sbjct: 485 IKPDDHLAWYNRGIALANLGRFEQAIASYDRVLEIKPDFHPAWSDRGIVLDNLGRFEEAL 544

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                 L I P        R +    +G + EAI   D AL ++ D  +       A+  
Sbjct: 545 ASCDQALAIKPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQ-------AWTN 597

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           +  AL    +        D   +I P + E W  R
Sbjct: 598 RGAALVNLGRWAEAIASCDRALEIKPDYHEAWTNR 632



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 5/289 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G++A  I+ + + L+  P   EA   RG A       E AI+ + +A++  
Sbjct: 257 NRGNALGNLGRFAEEIASYGRALEIKPDKHEAWYNRGNALGNLGRFEQAIASYDKALEIK 316

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG A   LG   EAI    +ALE +P+       RG+          A+  
Sbjct: 317 PDDHLAWYNRGVALGNLGRLEEAIASYDQALEIKPDFHLAWTNRGVALGNLGRLEEAIAS 376

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+  +   A+T  G AL ++G + +A  +  +A+ +  +  +AW +      +L 
Sbjct: 377 YDQALKIQPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLG 436

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              + +    + L     + +A++ RG+ L  LG+  + I      L I P +    Y R
Sbjct: 437 RWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALEIKPDDHLAWYNR 496

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIA 669
                 +G + +AI  YD  L+++ D     S    VL  L  +++ +A
Sbjct: 497 GIALANLGRFEQAIASYDRVLEIKPDFHPAWSDRGIVLDNLGRFEEALA 545



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 100/215 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A VN G++A  I+ +D+ L+  P Y EA   RG A A        I+ + +A++  
Sbjct: 427 NRGAALVNLGRWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALEIK 486

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG A A LG   +AI    + LE +P+      +RGIV      F  A+  
Sbjct: 487 PDDHLAWYNRGIALANLGRFEQAIASYDRVLEIKPDFHPAWSDRGIVLDNLGRFEEALAS 546

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + +  +   A+T  G AL ++G + +A  +  +A+ +  +  +AW +      +L 
Sbjct: 547 CDQALAIKPDFHLAWTNRGAALVNLGRWAEAIASCDRALAIKPDLHQAWTNRGAALVNLG 606

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
              +A+    + L I   + +A+  R   L  LG+
Sbjct: 607 RWAEAIASCDRALEIKPDYHEAWTNRENALRNLGR 641



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEI-QD 71
           L +  + I   D+ +++      A T R   A L +L  W++AI   D  LA   ++ Q 
Sbjct: 367 LGRLEEAIASYDQALKIQPDFHLAWTNRG--AALVNLGRWAEAIASCDRALAIKPDLHQA 424

Query: 72  ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
             NR      L      I   D+AL+  P   +A+  +G A + LGR  E ++ ++K  E
Sbjct: 425 WTNRGAALVNLGRWAEEIASYDRALEFKPDYHEAWYNRGVALANLGRWAEEIASYDKALE 484


>gi|296127340|ref|YP_003634592.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019156|gb|ADG72393.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 617

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 141/267 (52%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG+A+ N   +  AI  + ++++ D    +A   RG ++ +    + AI DF + 
Sbjct: 194 DAYYNRGLAKNNANLHKEAIEDYSKVIELDHKNIDAYNNRGVSKNYLHLFDEAIKDFNKI 253

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++ +P+   A+  RG ++  LG   EAI+D  KA++  PN AD  + R     +   F  
Sbjct: 254 LELDPNNYYAYGNRGNSKHDLGLYKEAIKDYDKAIKINPNYADCYYNRANSKKELGLFKE 313

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A++D    +K   ++ + Y   G A   +  Y++A + + K I+LD N+ +A+ +     
Sbjct: 314 AIKDYDNAIKWKPKDINVYINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYNRANAK 373

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           ++L    +A++   + +Y++  +S+AY+ RGL   GLG +K+AIKD    + +   N E 
Sbjct: 374 RELGLYNEAIKDYDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKDYEESIDLCADNPEA 433

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
            Y   S  + +G  +E+IK YD A++L
Sbjct: 434 YYNIGSAKYDLGLLKESIKYYDKAIEL 460



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 130/255 (50%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G +  AI  +D  +K  P      I RG A+      E AI D+ + I+ + +  +A+  
Sbjct: 309 GLFKEAIKDYDNAIKWKPKDINVYINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYN 368

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R  A+  LG   EAI+D  KA+   PN ++  + RG+       +  A++D    + L  
Sbjct: 369 RANAKRELGLYNEAIKDYDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKDYEESIDLCA 428

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +N  AY  +G A   +G  K++ + + KAI+L   + EA+ +      DL   ++A++  
Sbjct: 429 DNPEAYYNIGSAKYDLGLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYKEAIKDY 488

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + + ++   S  Y+ RGL    LG +K+AIKD S  + + P+ +     R S    +GE
Sbjct: 489 DKSIELNPNDSNTYNNRGLTKSSLGLYKEAIKDYSKAIELSPNYVYAYSNRGSAKDELGE 548

Query: 635 YREAIKDYDAALDLE 649
           Y+EAIKDYD A++L+
Sbjct: 549 YKEAIKDYDKAIELK 563



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 20/287 (6%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           + G+   N G Y  AI  +++ +   P Y  A   RG AR      + AI D+ +AI+ +
Sbjct: 130 TNGVVDNNTGSYEKAIEYYNKAIDLIPNYALAYYNRGLARNNLGFFKKAIKDYDKAIELS 189

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  +A+  RG A+       EAI+D SK +E +  + D  + RG+       F+ A++D
Sbjct: 190 KNYKDAYYNRGLAKNNANLHKEAIEDYSKVIELDHKNIDAYNNRGVSKNYLHLFDEAIKD 249

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD  N  AY   G +   +G YK+A + + KAI+++ N+ +        Y + A
Sbjct: 250 FNKILELDPNNYYAYGNRGNSKHDLGLYKEAIKDYDKAIKINPNYADC-------YYNRA 302

Query: 566 NSEKALECLQQVLYIDKRFSKA----------YHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           NS+K L   ++ +   K +  A          Y  RG   + L  +++AIKD    + +D
Sbjct: 303 NSKKELGLFKEAI---KDYDNAIKWKPKDINVYINRGNAKYDLELYEEAIKDYDKIIKLD 359

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            +  +  Y RA+    +G Y EAIKDYD A+ L  +  E +  + LA
Sbjct: 360 SNYTDAYYNRANAKRELGLYNEAIKDYDKAIYLNPNYSEAYNNRGLA 406



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 134/263 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG ++ + G Y  AI  +D+ +K +P Y +    R  ++      + AI D+  AI+  
Sbjct: 266 NRGNSKHDLGLYKEAIKDYDKAIKINPNYADCYYNRANSKKELGLFKEAIKDYDNAIKWK 325

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG A+  L    EAI+D  K ++ + N  D  + R     +   +N A++D
Sbjct: 326 PKDINVYINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYNRANAKRELGLYNEAIKD 385

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L+     AY   GLA S +G YK+A + + ++I L  +  EA+ ++     DL 
Sbjct: 386 YDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKDYEESIDLCADNPEAYYNIGSAKYDLG 445

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             +++++   + + +   +S+AY+ RGL  + L  +K+AIKD    + ++P++      R
Sbjct: 446 LLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYKEAIKDYDKSIELNPNDSNTYNNR 505

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
                ++G Y+EAIKDY  A++L
Sbjct: 506 GLTKSSLGLYKEAIKDYSKAIEL 528



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 42/281 (14%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL--- 431
           K K I+V   ++RG A+ +   Y  AI  +D+I+K D  Y +A   R  A+   REL   
Sbjct: 325 KPKDINV--YINRGNAKYDLELYEEAIKDYDKIIKLDSNYTDAYYNRANAK---RELGLY 379

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS------------------ 473
             AI D+ +AI  NP+  EA+  RG A++ LG   EAI+D                    
Sbjct: 380 NEAIKDYDKAIYLNPNYSEAYNNRGLAKSGLGMYKEAIKDYEESIDLCADNPEAYYNIGS 439

Query: 474 ----------------KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
                           KA+E  P  ++  + RG+     + +  A++D    ++L+  + 
Sbjct: 440 AKYDLGLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYKEAIKDYDKSIELNPNDS 499

Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
           + Y   GL  SS+G YK+A + + KAI+L  N++ A+ +      +L   ++A++   + 
Sbjct: 500 NTYNNRGLTKSSLGLYKEAIKDYSKAIELSPNYVYAYSNRGSAKDELGEYKEAIKDYDKA 559

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           + +    +  Y+ RG +    G +K+A+KD    L ++P+N
Sbjct: 560 IELKPNMAYLYNDRGWVKKNAGLYKEALKDYKKALELEPNN 600



 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 105/197 (53%), Gaps = 4/197 (2%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +   G      G   +AI+  +KA++  PN A   + RG+       F  A++D    ++
Sbjct: 128 YNTNGVVDNNTGSYEKAIEYYNKAIDLIPNYALAYYNRGLARNNLGFFKKAIKDYDKAIE 187

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEK 569
           L K  K AY   GLA ++   +K+A E + K I+LD   ++A+ +  +++ Y  L   ++
Sbjct: 188 LSKNYKDAYYNRGLAKNNANLHKEAIEDYSKVIELDHKNIDAYNNRGVSKNYLHLF--DE 245

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A++   ++L +D     AY  RG   H LG +K+AIKD    + I+P+  +C Y RA+  
Sbjct: 246 AIKDFNKILELDPNNYYAYGNRGNSKHDLGLYKEAIKDYDKAIKINPNYADCYYNRANSK 305

Query: 630 HAIGEYREAIKDYDAAL 646
             +G ++EAIKDYD A+
Sbjct: 306 KELGLFKEAIKDYDNAI 322



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 8/169 (4%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G+  ++ G Y+KA E + KAI L  N+  A+ +      +L   +KA++   + + + K 
Sbjct: 132 GVVDNNTGSYEKAIEYYNKAIDLIPNYALAYYNRGLARNNLGFFKKAIKDYDKAIELSKN 191

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           +  AY+ RGL  +    HK+AI+D S  + +D  NI+    R    + +  + EAIKD++
Sbjct: 192 YKDAYYNRGLAKNNANLHKEAIEDYSKVIELDHKNIDAYNNRGVSKNYLHLFDEAIKDFN 251

Query: 644 AALDLELDSMEKFVLQC-----LAFYQKEIALY-TASKINSEF--CWFD 684
             L+L+ ++   +  +      L  Y++ I  Y  A KIN  +  C+++
Sbjct: 252 KILELDPNNYYAYGNRGNSKHDLGLYKEAIKDYDKAIKINPNYADCYYN 300



 Score = 47.0 bits (110), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 10/92 (10%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +++++ K I+ LDS    +Y      NRA    +L L+   I+D DKA+ L+P   +AY 
Sbjct: 348 AIKDYDKIIK-LDSNYTDAY-----YNRANAKRELGLYNEAIKDYDKAIYLNPNYSEAYN 401

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
            +G A S LG  +EA+    K YE ++   AD
Sbjct: 402 NRGLAKSGLGMYKEAI----KDYEESIDLCAD 429



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 13/129 (10%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASAITAR------IELAKLCSLRNWSKAIRILDSL 62
           ++Y L    ++I   D+ + +    + A   R      +EL K  +++++ K+I  L+  
Sbjct: 440 AKYDLGLLKESIKYYDKAIELRPTYSEAYNNRGLSKNDLELYK-EAIKDYDKSIE-LNPN 497

Query: 63  LAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
            + +Y      NR    S L L+K  I+D  KA++L P  + AY  +G A   LG  +EA
Sbjct: 498 DSNTYN-----NRGLTKSSLGLYKEAIKDYSKAIELSPNYVYAYSNRGSAKDELGEYKEA 552

Query: 123 LSVWEKGYE 131
           +  ++K  E
Sbjct: 553 IKDYDKAIE 561


>gi|254411497|ref|ZP_05025274.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196181998|gb|EDX76985.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 703

 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 145/291 (49%), Gaps = 5/291 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG   +   +Y  A+S +++ ++  P Y EA +G+G A     + EAA+  + +AIQ  
Sbjct: 337 NRGETLLELRRYEDALSAYNRAVELQPDYAEAWLGQGDALLALGQSEAALDAYDQAIQIQ 396

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EAWK RG+A AAL     AI    +  + +P   +    RG+V  K + ++AA+  
Sbjct: 397 REYPEAWKGRGEALAALQRYEAAISAFDQVTKLQPEDVETWERRGMVQMKLQRYSAAIAS 456

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++     SA+   G AL ++ +Y++A +++ KA++   +  E W      + +L 
Sbjct: 457 YDKALEIQPNYSSAWYRRGWALHNLQQYEEAIKSYDKAVEHKPDSAEYWYQRGNAFVNLN 516

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
               A++  Q+ +     F +A++ +G +L+ L Q+++A+      + + P++ E  Y R
Sbjct: 517 KHRDAVDSYQKAVQFQPDFYRAWYSQGSILNNLNQYQEALAAFEQAVKLQPNSYEAWYGR 576

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
           A   H +  Y EA+  Y+ A+ L  +S + +     V   L  YQ  IA Y
Sbjct: 577 AWALHQLQRYDEALMAYEKAVKLRPNSEQAWYNRGNVFYTLEQYQDAIAAY 627



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 129/262 (49%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +G A +  G+  +A+  +DQ ++    YPEA  GRG A A  +  EAAIS F +  + 
Sbjct: 370 LGQGDALLALGQSEAALDAYDQAIQIQREYPEAWKGRGEALAALQRYEAAISAFDQVTKL 429

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   E W+RRG  +  L     AI    KALE +PN +   + RG      + +  A++
Sbjct: 430 QPEDVETWERRGMVQMKLQRYSAAIASYDKALEIQPNYSSAWYRRGWALHNLQQYEEAIK 489

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                V+   ++   +   G A  ++ +++ A +++ KA+Q   +F  AW        +L
Sbjct: 490 SYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDAVDSYQKAVQFQPDFYRAWYSQGSILNNL 549

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++AL   +Q + +     +A++ R   LH L ++ +A+      + + P++ +  Y 
Sbjct: 550 NQYQEALAAFEQAVKLQPNSYEAWYGRAWALHQLQRYDEALMAYEKAVKLRPNSEQAWYN 609

Query: 625 RASCYHAIGEYREAIKDYDAAL 646
           R + ++ + +Y++AI  YD A+
Sbjct: 610 RGNVFYTLEQYQDAIAAYDQAV 631



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 117/250 (46%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           +++K +   V+    RG+ Q+   +Y++AI+ +D+ L+  P Y  A   RG A    ++ 
Sbjct: 425 QVTKLQPEDVETWERRGMVQMKLQRYSAAIASYDKALEIQPNYSSAWYRRGWALHNLQQY 484

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI  + +A++  P + E W +RG A   L +  +A+    KA++F+P+     + +G 
Sbjct: 485 EEAIKSYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDAVDSYQKAVQFQPDFYRAWYSQGS 544

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           +      +  A+      VKL   +  A+     AL  +  Y +A  A+ KA++L  N  
Sbjct: 545 ILNNLNQYQEALAAFEQAVKLQPNSYEAWYGRAWALHQLQRYDEALMAYEKAVKLRPNSE 604

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +AW +    +  L   + A+    Q +   +   +A++ R   L  L ++ +A+    + 
Sbjct: 605 QAWYNRGNVFYTLEQYQDAIAAYDQAVAHKRSHYQAWNSRANALFNLKRYNEALTSYENA 664

Query: 612 LGIDPSNIEC 621
           L   P+  E 
Sbjct: 665 LTYQPNYKEA 674



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 83/177 (46%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + RG    + + +  A+   +  V+L  +   A+   G AL ++G+ + A +A+ +AIQ+
Sbjct: 336 YNRGETLLELRRYEDALSAYNRAVELQPDYAEAWLGQGDALLALGQSEAALDAYDQAIQI 395

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
            R + EAW    +    L   E A+    QV  +     + +  RG++   L ++  AI 
Sbjct: 396 QREYPEAWKGRGEALAALQRYEAAISAFDQVTKLQPEDVETWERRGMVQMKLQRYSAAIA 455

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
                L I P+     Y R    H + +Y EAIK YD A++ + DS E +  +  AF
Sbjct: 456 SYDKALEIQPNYSSAWYRRGWALHNLQQYEEAIKSYDKAVEHKPDSAEYWYQRGNAF 512



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 3/126 (2%)

Query: 8   DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QS 66
           D+   L ++   +   D+ +++      A   R E   L +L+ +  AI   D +   Q 
Sbjct: 374 DALLALGQSEAALDAYDQAIQIQREYPEAWKGRGE--ALAALQRYEAAISAFDQVTKLQP 431

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
            +++    R     +L+ +   I   DKAL++ P    A+  +G A   L + EEA+  +
Sbjct: 432 EDVETWERRGMVQMKLQRYSAAIASYDKALEIQPNYSSAWYRRGWALHNLQQYEEAIKSY 491

Query: 127 EKGYEH 132
           +K  EH
Sbjct: 492 DKAVEH 497


>gi|21674885|ref|NP_662950.1| hypothetical protein CT2075 [Chlorobium tepidum TLS]
 gi|21648109|gb|AAM73292.1| TPR domain protein [Chlorobium tepidum TLS]
          Length = 297

 Score =  120 bits (300), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 75/257 (29%), Positives = 130/257 (50%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + +GI +  EG Y  AI  F + ++  P   +A   RG AR    +L  AI+D++ +I  
Sbjct: 14  IDQGIRRGLEGNYQDAIDHFSRAIRLTPRNADAFYNRGLARVSIGDLTGAIADYSMSISL 73

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P +  A+  RG A AALG   EA+ D+S+A+   P+ A + + RG +    K +  A+ 
Sbjct: 74  DPRSSGAYNNRGFALAALGRYAEALADMSRAIALRPDMAQLYNNRGTIRMSIKAYALAIA 133

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  + LD     AY   GLA +  G+ + A   + +A+++D  +  AW +L   +  L
Sbjct: 134 DFTRAIALDPLLAGAYNNRGLARNLSGQLQGAVADYREAVRIDPRYKVAWYNLGNAHISL 193

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            ++++A+E   +VL +D     A + R      LG +K A++DL+  +   P +    Y 
Sbjct: 194 GDAKEAVEDYSKVLVLDPGMLVARNNRAFARLSLGDYKGALEDLNLVISKSPQDAAGWYN 253

Query: 625 RASCYHAIGEYREAIKD 641
           R       G+ + AI+D
Sbjct: 254 RGVVRKLAGDRQGAIED 270



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 90/195 (46%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G  R   G   +AI   S+A+   P +AD  + RG+      D   A+ D S  + LD 
Sbjct: 16  QGIRRGLEGNYQDAIDHFSRAIRLTPRNADAFYNRGLARVSIGDLTGAIADYSMSISLDP 75

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +  AY   G AL+++G Y +A     +AI L  +  + + +       +     A+   
Sbjct: 76  RSSGAYNNRGFALAALGRYAEALADMSRAIALRPDMAQLYNNRGTIRMSIKAYALAIADF 135

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + + +D   + AY+ RGL  +  GQ + A+ D    + IDP      Y   + + ++G+
Sbjct: 136 TRAIALDPLLAGAYNNRGLARNLSGQLQGAVADYREAVRIDPRYKVAWYNLGNAHISLGD 195

Query: 635 YREAIKDYDAALDLE 649
            +EA++DY   L L+
Sbjct: 196 AKEAVEDYSKVLVLD 210



 Score = 42.4 bits (98), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 39/91 (42%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A ++ G    A+  + ++L  DP    A   R  AR    + + A+ D    I  +P 
Sbjct: 187 GNAHISLGDAKEAVEDYSKVLVLDPGMLVARNNRAFARLSLGDYKGALEDLNLVISKSPQ 246

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEF 478
               W  RG  R   G+   AI+DL +A  F
Sbjct: 247 DAAGWYNRGVVRKLAGDRQGAIEDLRRAAAF 277


>gi|310778588|ref|YP_003966921.1| hypothetical protein [Ilyobacter polytropus DSM 2926]
 gi|309747911|gb|ADO82573.1| TPR repeat-containing protein [Ilyobacter polytropus DSM 2926]
          Length = 363

 Score =  119 bits (299), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 147/284 (51%), Gaps = 5/284 (1%)

Query: 371 TRISKSKSISVD--FRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
           +R    K+I +D  F+ +   RGI++ + G +  A+  FD+ ++ DP +  A   RG  +
Sbjct: 60  SRKDYDKTIQLDPEFKYAYDNRGISKGDLGDFEGAVEDFDKAIELDPKFIYAYSNRGFTK 119

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
               +LE AI+D+ +AI+ NP    A+  RG A+    +   AI D SK +  +P S   
Sbjct: 120 TKLGDLEGAIADYDKAIKLNPKFKLAYFNRGNAKYFSDDYKGAINDYSKVINIDPKSQVA 179

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG+  ++  ++ +++ED +  ++LD + K +Y   G   + + +YK A   + K I+
Sbjct: 180 YNNRGLAKWELGEYKSSIEDYNKAIRLDPKYKLSYNNRGFTKAQLKDYKGAINDYNKTIE 239

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           LD +F+ A+ +       L +   A+E   +V+  D  +  AY+ RGL+   L  +  A+
Sbjct: 240 LDPDFVLAYSNRGMAKLKLQDYNGAMEDYNKVIESDPDYEVAYYRRGLVKTKLRDYHGAL 299

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +D +  + +DP+  +  Y R      +G++  A++D+   + L+
Sbjct: 300 EDYNKVIKLDPNFKQAYYNRGIIKTKLGDFDGALEDFGKTIKLD 343



 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 121/233 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  +   G    AI+ +D+ +K +P +  A   RG A+ F  + + AI+D+++ I  +
Sbjct: 114 NRGFTKTKLGDLEGAIADYDKAIKLNPKFKLAYFNRGNAKYFSDDYKGAINDYSKVINID 173

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +  A+  RG A+  LGE   +I+D +KA+  +P      + RG    + KD+  A+ D
Sbjct: 174 PKSQVAYNNRGLAKWELGEYKSSIEDYNKAIRLDPKYKLSYNNRGFTKAQLKDYKGAIND 233

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD +   AY+  G+A   + +Y  A E + K I+ D ++  A+         L 
Sbjct: 234 YNKTIELDPDFVLAYSNRGMAKLKLQDYNGAMEDYNKVIESDPDYEVAYYRRGLVKTKLR 293

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           +   ALE   +V+ +D  F +AY+ RG++   LG    A++D    + +DP++
Sbjct: 294 DYHGALEDYNKVIKLDPNFKQAYYNRGIIKTKLGDFDGALEDFGKTIKLDPND 346



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 110/245 (44%)

Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
           ++K DP        RG  + F  ++  +  D+ + IQ +P    A+  RG ++  LG+  
Sbjct: 33  MIKSDPNEQFEYYNRGLIKYFSGDIIGSRKDYDKTIQLDPEFKYAYDNRGISKGDLGDFE 92

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
            A++D  KA+E +P        RG    K  D   A+ D    +KL+ + K AY   G A
Sbjct: 93  GAVEDFDKAIELDPKFIYAYSNRGFTKTKLGDLEGAIADYDKAIKLNPKFKLAYFNRGNA 152

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
                +YK A   + K I +D     A+ +      +L   + ++E   + + +D ++  
Sbjct: 153 KYFSDDYKGAINDYSKVINIDPKSQVAYNNRGLAKWELGEYKSSIEDYNKAIRLDPKYKL 212

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           +Y+ RG     L  +K AI D +  + +DP  +     R      + +Y  A++DY+  +
Sbjct: 213 SYNNRGFTKAQLKDYKGAINDYNKTIELDPDFVLAYSNRGMAKLKLQDYNGAMEDYNKVI 272

Query: 647 DLELD 651
           + + D
Sbjct: 273 ESDPD 277



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 68/154 (44%)

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            +K D   +  Y   GL     G+   + + + K IQLD  F  A+ +      DL + E
Sbjct: 33  MIKSDPNEQFEYYNRGLIKYFSGDIIGSRKDYDKTIQLDPEFKYAYDNRGISKGDLGDFE 92

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A+E   + + +D +F  AY  RG     LG  + AI D    + ++P      + R + 
Sbjct: 93  GAVEDFDKAIELDPKFIYAYSNRGFTKTKLGDLEGAIADYDKAIKLNPKFKLAYFNRGNA 152

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            +   +Y+ AI DY   ++++  S   +  + LA
Sbjct: 153 KYFSDDYKGAINDYSKVINIDPKSQVAYNNRGLA 186



 Score = 42.7 bits (99), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 7/75 (9%)

Query: 39  ARIELAKL-CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQ 97
           A+ EL +   S+ +++KAIR LD     SY      NR F  +QL+ +K  I D +K ++
Sbjct: 186 AKWELGEYKSSIEDYNKAIR-LDPKYKLSYN-----NRGFTKAQLKDYKGAINDYNKTIE 239

Query: 98  LDPTLLQAYILKGCA 112
           LDP  + AY  +G A
Sbjct: 240 LDPDFVLAYSNRGMA 254


>gi|145537418|ref|XP_001454423.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422183|emb|CAK87026.1| unnamed protein product [Paramecium tetraurelia]
          Length = 537

 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 152/312 (48%), Gaps = 8/312 (2%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD   ++GIA  +  +Y  AI  +++ +   P Y +A   +G       +   AI  + E
Sbjct: 215 VDAWNNKGIALDDLNQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECYNE 274

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI  NP   EAW  +G     L +  EAI+  ++A+   P    +   +G V      +N
Sbjct: 275 AISINPKYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQYN 334

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+E  +  + ++ +   A+   G+AL ++ +Y++A + + +AI ++  F EAW +    
Sbjct: 335 EAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKGFT 394

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
             +L   ++A+EC  + + I+ +++ A++ +G+ L  L Q+++AI+  +  + I+P   E
Sbjct: 395 LNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQYEEAIECYNEAISINPKYAE 454

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-AS 674
               +      + +Y EAIK Y+ A+ +     E +      L  L  Y++ I  Y  A 
Sbjct: 455 AWNDKGIALRNLNQYEEAIKCYNEAISINPKFAEAWYNKGITLNNLNQYEEAIKCYNEAI 514

Query: 675 KINS--EFCWFD 684
            IN   ++ W++
Sbjct: 515 SINPKVDYAWYN 526



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 159/326 (48%), Gaps = 12/326 (3%)

Query: 377 KSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           ++IS++F+     + +G+  V    Y  AI  +++ +  +P+   A   +G A    ++ 
Sbjct: 70  EAISINFKSDAAWIGKGLVLVELNHYEQAIKCYNEAISFNPLSVNAWNNKGYALNDLKQC 129

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI  + EAI  NP    AW  +G A   L +  EAI+  ++A+   P  A     +GI
Sbjct: 130 EEAIECYNEAIFINPKYISAWNGKGIALRNLKQYEEAIKCYNEAIYINPKDASAWQNKGI 189

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             +       A+E  +  + ++ +   A+   G+AL  + +Y++A E + +AI +   ++
Sbjct: 190 TLYNLNQNEEAIECYNEAISINPKYVDAWNNKGIALDDLNQYEEAIECYNEAISISPKYV 249

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +AW +      +L    +A+EC  + + I+ ++++A++ +G+ L  L Q+++AI+  +  
Sbjct: 250 DAWYNKGITLGNLNQYNEAIECYNEAISINPKYAEAWNYKGITLGNLQQYEEAIECYNEA 309

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           + I+P      + + +    + +Y EAI+ Y+ A+ +     E       A+  K IAL 
Sbjct: 310 ISINPKVDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAE-------AWNNKGIALR 362

Query: 672 TASKINSEFCWFDIDGDIDPLFKEYW 697
             ++    F  ++    I+P F E W
Sbjct: 363 NLNQYEEAFKCYNEAISINPKFAEAW 388



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 148/311 (47%), Gaps = 7/311 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +GIA  N  +Y  AI  +++ +  +P    A   +G       + E AI  + EAI  NP
Sbjct: 153 KGIALRNLKQYEEAIKCYNEAIYINPKDASAWQNKGITLYNLNQNEEAIECYNEAISINP 212

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  +G A   L +  EAI+  ++A+   P   D  + +GI       +N A+E  
Sbjct: 213 KYVDAWNNKGIALDDLNQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECY 272

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + ++ +   A+ Y G+ L ++ +Y++A E + +AI ++      W +      +L  
Sbjct: 273 NEAISINPKYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQ 332

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+EC  + + I+ ++++A++ +G+ L  L Q+++A K  +  + I+P   E  Y + 
Sbjct: 333 YNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFKCYNEAISINPKFAEAWYNKG 392

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
              + + ++ EAI+ ++ A+ +             A+Y K I L   ++       ++  
Sbjct: 393 FTLNNLNQFDEAIECFNEAISINPKYAS-------AWYNKGITLRNLNQYEEAIECYNEA 445

Query: 687 GDIDPLFKEYW 697
             I+P + E W
Sbjct: 446 ISINPKYAEAW 456



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 149/307 (48%), Gaps = 8/307 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI   N  +   AI  +++ +  +P Y +A   +G A     + E AI  + EAI  +
Sbjct: 186 NKGITLYNLNQNEEAIECYNEAISINPKYVDAWNNKGIALDDLNQYEEAIECYNEAISIS 245

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  +G     L +  EAI+  ++A+   P  A+  + +GI     + +  A+E 
Sbjct: 246 PKYVDAWYNKGITLGNLNQYNEAIECYNEAISINPKYAEAWNYKGITLGNLQQYEEAIEC 305

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + ++ +    +   G  L ++ +Y +A E + +AI ++  + EAW +     ++L 
Sbjct: 306 YNEAISINPKVDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNNKGIALRNLN 365

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A +C  + + I+ +F++A++ +G  L+ L Q  +AI+  +  + I+P      Y +
Sbjct: 366 QYEEAFKCYNEAISINPKFAEAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNK 425

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-ASKINSE 679
                 + +Y EAI+ Y+ A+ +     E +      L+ L  Y++ I  Y  A  IN +
Sbjct: 426 GITLRNLNQYEEAIECYNEAISINPKYAEAWNDKGIALRNLNQYEEAIKCYNEAISINPK 485

Query: 680 F--CWFD 684
           F   W++
Sbjct: 486 FAEAWYN 492



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 148/329 (44%), Gaps = 7/329 (2%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C         +SV+   ++G A  +  +   AI  +++ +  +P Y  A  G+G A    
Sbjct: 101 CYNEAISFNPLSVNAWNNKGYALNDLKQCEEAIECYNEAIFINPKYISAWNGKGIALRNL 160

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++ E AI  + EAI  NP    AW+ +G     L ++ EAI+  ++A+   P   D  + 
Sbjct: 161 KQYEEAIKCYNEAIYINPKDASAWQNKGITLYNLNQNEEAIECYNEAISINPKYVDAWNN 220

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +GI       +  A+E  +  + +  +   A+   G+ L ++ +Y +A E + +AI ++ 
Sbjct: 221 KGIALDDLNQYEEAIECYNEAISISPKYVDAWYNKGITLGNLNQYNEAIECYNEAISINP 280

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            + EAW +      +L   E+A+EC  + + I+ +    +  +G +L  L Q+ +AI+  
Sbjct: 281 KYAEAWNYKGITLGNLQQYEEAIECYNEAISINPKVDYVWFNKGNVLGNLNQYNEAIECY 340

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
           +  + I+P   E    +      + +Y EA K Y+ A+ +     E       A+Y K  
Sbjct: 341 NEAISINPKYAEAWNNKGIALRNLNQYEEAFKCYNEAISINPKFAE-------AWYNKGF 393

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYW 697
            L   ++ +     F+    I+P +   W
Sbjct: 394 TLNNLNQFDEAIECFNEAISINPKYASAW 422



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 157/321 (48%), Gaps = 12/321 (3%)

Query: 376 SKSISVDFR----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           S+ IS++ +      +G A  +  +Y  AI   ++ +  +P Y +AL+ +G A     + 
Sbjct: 2   SQPISINPQEKVWYDKGTALADLNQYQEAIQCLNEAISINPKYEQALVAKGNALRSLTQY 61

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + A   + EAI  N  +  AW  +G     L    +AI+  ++A+ F P S +  + +G 
Sbjct: 62  QDASKCYDEAISINFKSDAAWIGKGLVLVELNHYEQAIKCYNEAISFNPLSVNAWNNKGY 121

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                K    A+E  +  + ++ +  SA+   G+AL ++ +Y++A + + +AI ++    
Sbjct: 122 ALNDLKQCEEAIECYNEAIFINPKYISAWNGKGIALRNLKQYEEAIKCYNEAIYINPKDA 181

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            AW +      +L  +E+A+EC  + + I+ ++  A++ +G+ L  L Q+++AI+  +  
Sbjct: 182 SAWQNKGITLYNLNQNEEAIECYNEAISINPKYVDAWNNKGIALDDLNQYEEAIECYNEA 241

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQK 666
           + I P  ++  Y +      + +Y EAI+ Y+ A+ +     E +      L  L  Y++
Sbjct: 242 ISISPKYVDAWYNKGITLGNLNQYNEAIECYNEAISINPKYAEAWNYKGITLGNLQQYEE 301

Query: 667 EIALYT-ASKINS--EFCWFD 684
            I  Y  A  IN   ++ WF+
Sbjct: 302 AIECYNEAISINPKVDYVWFN 322



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 106/216 (49%), Gaps = 1/216 (0%)

Query: 381 VDFR-LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           VD+   ++G    N  +Y  AI  +++ +  +P Y EA   +G A     + E A   + 
Sbjct: 316 VDYVWFNKGNVLGNLNQYNEAIECYNEAISINPKYAEAWNNKGIALRNLNQYEEAFKCYN 375

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           EAI  NP   EAW  +G     L +  EAI+  ++A+   P  A   + +GI       +
Sbjct: 376 EAISINPKFAEAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQY 435

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+E  +  + ++ +   A+   G+AL ++ +Y++A + + +AI ++  F EAW +   
Sbjct: 436 EEAIECYNEAISINPKYAEAWNDKGIALRNLNQYEEAIKCYNEAISINPKFAEAWYNKGI 495

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
              +L   E+A++C  + + I+ +   A++ +G  +
Sbjct: 496 TLNNLNQYEEAIKCYNEAISINPKVDYAWYNQGQFI 531



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 129/287 (44%), Gaps = 28/287 (9%)

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
            ++ I  NP   + W  +G A A L +  EAIQ L++A+   P     L  +G       
Sbjct: 1   MSQPISINPQE-KVWYDKGTALADLNQYQEAIQCLNEAISINPKYEQALVAKGNALRSLT 59

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
            +  A +     + ++ ++ +A+   GL L  +  Y++A + + +AI  +   + AW + 
Sbjct: 60  QYQDASKCYDEAISINFKSDAAWIGKGLVLVELNHYEQAIKCYNEAISFNPLSVNAWNNK 119

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                DL   E+A+EC  + ++I+ ++  A++ +G+ L  L Q+++AIK  +  + I+P 
Sbjct: 120 GYALNDLKQCEEAIECYNEAIFINPKYISAWNGKGIALRNLKQYEEAIKCYNEAIYINPK 179

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLE-------------LDSMEKF--VLQCL- 661
           +      +    + + +  EAI+ Y+ A+ +              LD + ++   ++C  
Sbjct: 180 DASAWQNKGITLYNLNQNEEAIECYNEAISINPKYVDAWNNKGIALDDLNQYEEAIECYN 239

Query: 662 -----------AFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYW 697
                      A+Y K I L   ++ N     ++    I+P + E W
Sbjct: 240 EAISISPKYVDAWYNKGITLGNLNQYNEAIECYNEAISINPKYAEAW 286



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 13/150 (8%)

Query: 361 EAKRNKKFCVTRISK--------SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQI 407
           EA  NK F +  +++        +++IS++ + +     +GI   N  +Y  AI  +++ 
Sbjct: 386 EAWYNKGFTLNNLNQFDEAIECFNEAISINPKYASAWYNKGITLRNLNQYEEAIECYNEA 445

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           +  +P Y EA   +G A     + E AI  + EAI  NP   EAW  +G     L +  E
Sbjct: 446 ISINPKYAEAWNDKGIALRNLNQYEEAIKCYNEAISINPKFAEAWYNKGITLNNLNQYEE 505

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFK 497
           AI+  ++A+   P      + +G   FK K
Sbjct: 506 AIKCYNEAISINPKVDYAWYNQGQFIFKSK 535


>gi|186684862|ref|YP_001868058.1| hypothetical protein Npun_F4764 [Nostoc punctiforme PCC 73102]
 gi|186467314|gb|ACC83115.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 630

 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 140/305 (45%), Gaps = 43/305 (14%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQ 443
           L++G+    +G Y  A + + Q +K +P + EA   RG     Q ++   AI+DF  AI+
Sbjct: 31  LNQGLNHSLQGDYQEANAAYTQAIKLNPNFAEAYHNRGIILTDQLKDYRGAIADFNRAIE 90

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            NP+   A+  RG A   LG+   AI D ++ALE +PN A   H RG   F  + ++ A+
Sbjct: 91  INPNFATAYYHRGNAHYFLGDYQGAIADYNQALEIDPNLAQFYHSRGNAYFALEKYDKAI 150

Query: 504 ED----------LSACVKLDKENK--------------------------------SAYT 521
            D          L+  + +D  N                                 +AY+
Sbjct: 151 ADYIQTIETSTQLADNINIDIANAYHNRGVVCFEKGDRQGAIADFQQALQWYPNFAAAYS 210

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G     +G +K+A   H +A+QLD    EA+ +    +  L N + A+    + L I+
Sbjct: 211 NRGNIHHILGNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLENYQSAIADYNRALEIN 270

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
            RF+ AY+ RGL+L  L ++ +AI+D +  L  +P +++    R      + +Y  AI D
Sbjct: 271 PRFAGAYYNRGLVLAHLKEYHRAIEDFNQALKFNPDDVQAYCERGLVRSTLEDYEGAIAD 330

Query: 642 YDAAL 646
           YD AL
Sbjct: 331 YDRAL 335



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 7/269 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+    +G    AI+ F Q L+  P +  A   RG         + AI+D   A+Q +
Sbjct: 177 NRGVVCFEKGDRQGAIADFQQALQWYPNFAAAYSNRGNIHHILGNFKEAIADHDRALQLD 236

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA+  RG A  +L     AI D ++ALE  P  A   + RG+V    K+++ A+ED
Sbjct: 237 PKLAEAYHNRGNAHYSLENYQSAIADYNRALEINPRFAGAYYNRGLVLAHLKEYHRAIED 296

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K + ++  AY   GL  S++ +Y+ A   + +A+Q +      +G      + L 
Sbjct: 297 FNQALKFNPDDVQAYCERGLVRSTLEDYEGAIADYDRALQENPTLALVYGFRANALRRLG 356

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+E   ++L ++   ++ Y  R      LG HK AIKD    L I+          
Sbjct: 357 DYQGAIEDSNRLLQLNPSLAEGYCDRAAARRSLGDHKGAIKDYDRALQINDQ-------L 409

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSME 654
           A+ Y+  G  REA+KD   A+D    ++E
Sbjct: 410 AAAYYGRGIAREALKDLQGAIDDNTQAIE 438



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 146/349 (41%), Gaps = 59/349 (16%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G +  AI+  D+ L+ DP   EA   RG A       ++AI+D+  A++ NP    A+  
Sbjct: 220 GNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLENYQSAIADYNRALEINPRFAGAYYN 279

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG   A L E   AI+D ++AL+F P+      ERG+V    +D+  A+ D    ++ + 
Sbjct: 280 RGLVLAHLKEYHRAIEDFNQALKFNPDDVQAYCERGLVRSTLEDYEGAIADYDRALQENP 339

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
                Y +   AL  +G+Y+ A E   + +QL+ +  E +       + L + + A++  
Sbjct: 340 TLALVYGFRANALRRLGDYQGAIEDSNRLLQLNPSLAEGYCDRAAARRSLGDHKGAIKDY 399

Query: 575 QQVLYIDKRFSKAYHLRGLL------LHG----------------------------LGQ 600
            + L I+ + + AY+ RG+       L G                            LG 
Sbjct: 400 DRALQINDQLAAAYYGRGIAREALKDLQGAIDDNTQAIELVPEFSQAYCNRGNTRRLLGD 459

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
            + AI D +  L I+P  IE  Y R S ++A+  Y  AI DY  AL +          Q 
Sbjct: 460 EQGAIADYNQALKINPDLIEAYYNRGSTHYALEAYESAIADYTQALQIN--------PQS 511

Query: 661 LAFYQKEIALYTASKINSEFCWFDIDG---------DIDPLFKEYWCKR 700
            AFY        + + N+ +   D  G          ID  F E W  R
Sbjct: 512 AAFY--------SDRANARYALEDYQGAIEDYSRAIAIDSSFAEDWYNR 552



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 135/264 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   +  +Y  AI  F+Q LK +P   +A   RG  R+   + E AI+D+  A+Q N
Sbjct: 279 NRGLVLAHLKEYHRAIEDFNQALKFNPDDVQAYCERGLVRSTLEDYEGAIADYDRALQEN 338

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    +  R  A   LG+   AI+D ++ L+  P+ A+   +R        D   A++D
Sbjct: 339 PTLALVYGFRANALRRLGDYQGAIEDSNRLLQLNPSLAEGYCDRAAARRSLGDHKGAIKD 398

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++++ +  +AY   G+A  ++ + + A + + +AI+L   F +A+ +     + L 
Sbjct: 399 YDRALQINDQLAAAYYGRGIAREALKDLQGAIDDNTQAIELVPEFSQAYCNRGNTRRLLG 458

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    Q L I+    +AY+ RG   + L  ++ AI D +  L I+P +      R
Sbjct: 459 DEQGAIADYNQALKINPDLIEAYYNRGSTHYALEAYESAIADYTQALQINPQSAAFYSDR 518

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
           A+  +A+ +Y+ AI+DY  A+ ++
Sbjct: 519 ANARYALEDYQGAIEDYSRAIAID 542



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 116/222 (52%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R  A+ + G +  AI  +D+ L+ +     A  GRG AR   ++L+ AI D T+AI+  P
Sbjct: 382 RAAARRSLGDHKGAIKDYDRALQINDQLAAAYYGRGIAREALKDLQGAIDDNTQAIELVP 441

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG  R  LG+   AI D ++AL+  P+  +  + RG  ++  + + +A+ D 
Sbjct: 442 EFSQAYCNRGNTRRLLGDEQGAIADYNQALKINPDLIEAYYNRGSTHYALEAYESAIADY 501

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++++ ++ + Y+    A  ++ +Y+ A E + +AI +D +F E W +  +    L +
Sbjct: 502 TQALQINPQSAAFYSDRANARYALEDYQGAIEDYSRAIAIDSSFAEDWYNRGRSRSLLGD 561

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            + AL  L Q L +   ++ AY LR  +   LG  + AI D 
Sbjct: 562 LQGALTDLNQALQLQPHWASAYILRADVYQNLGDSQGAIADF 603



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 38/298 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQS 444
           RG+ +     Y  AI+ +D+ L+E+P    AL+    A A +R  + + AI D    +Q 
Sbjct: 314 RGLVRSTLEDYEGAIADYDRALQENPTL--ALVYGFRANALRRLGDYQGAIEDSNRLLQL 371

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NPS  E +  R  AR +LG+   AI+D  +AL+     A   + RGI     KD   A++
Sbjct: 372 NPSLAEGYCDRAAARRSLGDHKGAIKDYDRALQINDQLAAAYYGRGIAREALKDLQGAID 431

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---------- 554
           D +  ++L  E   AY   G     +G+ + A   + +A++++ + +EA+          
Sbjct: 432 DNTQAIELVPEFSQAYCNRGNTRRLLGDEQGAIADYNQALKINPDLIEAYYNRGSTHYAL 491

Query: 555 -------GHLTQ----------FYQDLANSEKALECLQ-------QVLYIDKRFSKAYHL 590
                     TQ          FY D AN+  ALE  Q       + + ID  F++ ++ 
Sbjct: 492 EAYESAIADYTQALQINPQSAAFYSDRANARYALEDYQGAIEDYSRAIAIDSSFAEDWYN 551

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           RG     LG  + A+ DL+  L + P       LRA  Y  +G+ + AI D+  + DL
Sbjct: 552 RGRSRSLLGDLQGALTDLNQALQLQPHWASAYILRADVYQNLGDSQGAIADFQKSADL 609



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 9/245 (3%)

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA-ALGESVEAIQD 471
           M  E  + +G   + Q + + A + +T+AI+ NP+  EA+  RG      L +   AI D
Sbjct: 25  MNAEEFLNQGLNHSLQGDYQEANAAYTQAIKLNPNFAEAYHNRGIILTDQLKDYRGAIAD 84

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            ++A+E  PN A   + RG  ++   D+  A+ D +  +++D      Y   G A  ++ 
Sbjct: 85  FNRAIEINPNFATAYYHRGNAHYFLGDYQGAIADYNQALEIDPNLAQFYHSRGNAYFALE 144

Query: 532 EYKKAEEAHLKAIQ--------LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           +Y KA   +++ I+        ++ +   A+ +      +  + + A+   QQ L     
Sbjct: 145 KYDKAIADYIQTIETSTQLADNINIDIANAYHNRGVVCFEKGDRQGAIADFQQALQWYPN 204

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           F+ AY  RG + H LG  K+AI D    L +DP   E  + R + ++++  Y+ AI DY+
Sbjct: 205 FAAAYSNRGNIHHILGNFKEAIADHDRALQLDPKLAEAYHNRGNAHYSLENYQSAIADYN 264

Query: 644 AALDL 648
            AL++
Sbjct: 265 RALEI 269



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 7/155 (4%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G    AI+ ++Q LK +P   EA   RG+        E+AI+D+T+A+Q NP +   +  
Sbjct: 458 GDEQGAIADYNQALKINPDLIEAYYNRGSTHYALEAYESAIADYTQALQINPQSAAFYSD 517

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R  AR AL +   AI+D S+A+  + + A+  + RG       D   A+ DL+  ++L  
Sbjct: 518 RANARYALEDYQGAIEDYSRAIAIDSSFAEDWYNRGRSRSLLGDLQGALTDLNQALQLQP 577

Query: 515 ENKSAYTY-------LGLALSSIGEYKKAEEAHLK 542
              SAY         LG +  +I +++K+ + + +
Sbjct: 578 HWASAYILRADVYQNLGDSQGAIADFQKSADLYYQ 612



 Score = 44.3 bits (103), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 8   DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QS 66
           ++ Y L      I + +  + ++   A A   R  +  L  L+ + +AI   +  L    
Sbjct: 248 NAHYSLENYQSAIADYNRALEINPRFAGAYYNRGLV--LAHLKEYHRAIEDFNQALKFNP 305

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
            ++Q  C R    S LE ++  I D D+ALQ +PTL   Y  +  A   LG  + A+
Sbjct: 306 DDVQAYCERGLVRSTLEDYEGAIADYDRALQENPTLALVYGFRANALRRLGDYQGAI 362



 Score = 43.9 bits (102), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 7/115 (6%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S  F   R  A+     Y  AI  + + +  D  + E    RG +R+   +L+ A++D  
Sbjct: 511 SAAFYSDRANARYALEDYQGAIEDYSRAIAIDSSFAEDWYNRGRSRSLLGDLQGALTDLN 570

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           +A+Q  P    A+  R      LG+S  AI D  K       SAD+ ++ G V +
Sbjct: 571 QALQLQPHWASAYILRADVYQNLGDSQGAIADFQK-------SADLYYQEGNVQY 618


>gi|124024538|ref|YP_001018845.1| hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964824|gb|ABM79580.1| Hypothetical protein P9303_28501 [Prochlorococcus marinus str. MIT
           9303]
          Length = 706

 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 165/329 (50%), Gaps = 7/329 (2%)

Query: 327 SYSKSSISDNKSSDSTESRS-KLSFKWDMLKETSNEAKRNKKFCVTRISK-SKSISVDFR 384
           +Y+K +++D + + S  +++ +++ ++    E    AK+  K     I+  +K+I ++ +
Sbjct: 323 AYAKDALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINPQ 382

Query: 385 LS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
            +     RG+ + N G Y  AI+ +++ ++ DP +  A   RG  +    + + AI+D+ 
Sbjct: 383 HTGPFNNRGLVKKNLGDYQGAIADYNKAIELDPQHAYAYYNRGIVKKNLGDYQGAIADYN 442

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI  NP   E +  RG  +  LG    AI D +KA+E  P  A     RGI  +  KD+
Sbjct: 443 KAIAINPQLAETYSNRGGIKRVLGNYQGAIADFNKAIEINPQYAPAYMNRGIAKYDLKDY 502

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ D S  + ++ ++  A+     A   +G+++ A     +AI+++  F +A+ +   
Sbjct: 503 QGAIADYSKAITINPQHAIAFNNRSNAKDQLGDHQGAISDLNRAIEINPQFADAFNNRGA 562

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +L + + A+    + + I+ + ++ Y  RG +   LG ++ AI D +  + IDP   
Sbjct: 563 TKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYNKAIEIDPQYA 622

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDL 648
                R    +  G++++A+KD + AL +
Sbjct: 623 SAYNNRGWSKYLQGDFQDALKDANKALAI 651



 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 153/330 (46%), Gaps = 23/330 (6%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AIS  ++ L+ +P Y  A   RG A+   ++ + AI+D+ +AI+ NP     +  RG
Sbjct: 332 YQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINPQHTGPFNNRG 391

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
             +  LG+   AI D +KA+E +P  A   + RGIV     D+  A+ D +  + ++ + 
Sbjct: 392 LVKKNLGDYQGAIADYNKAIELDPQHAYAYYNRGIVKKNLGDYQGAIADYNKAIAINPQL 451

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
              Y+  G     +G Y+ A     KAI+++  +  A+ +      DL + + A+    +
Sbjct: 452 AETYSNRGGIKRVLGNYQGAIADFNKAIEINPQYAPAYMNRGIAKYDLKDYQGAIADYSK 511

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            + I+ + + A++ R      LG H+ AI DL+  + I+P   +    R +  + +G+++
Sbjct: 512 AITINPQHAIAFNNRSNAKDQLGDHQGAISDLNRAIEINPQFADAFNNRGATKYELGDHQ 571

Query: 637 EAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
            AI DY+ A+ +     E +     + + L  YQ  IA Y  +             +IDP
Sbjct: 572 GAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYNKAI------------EIDP 619

Query: 692 LFKEYWCKRLHPKNVCEKVYRQPPLRDSLK 721
            +   +  R   K      Y Q   +D+LK
Sbjct: 620 QYASAYNNRGWSK------YLQGDFQDALK 643



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 150/304 (49%), Gaps = 3/304 (0%)

Query: 349 SFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFD 405
           S +   L+  + +A  + +  ++ ++K+  I+  +  +   RG A+     Y  AI+ ++
Sbjct: 315 SMRGYFLRAYAKDALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYN 374

Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
           + ++ +P +      RG  +    + + AI+D+ +AI+ +P    A+  RG  +  LG+ 
Sbjct: 375 KAIEINPQHTGPFNNRGLVKKNLGDYQGAIADYNKAIELDPQHAYAYYNRGIVKKNLGDY 434

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
             AI D +KA+   P  A+    RG +     ++  A+ D +  ++++ +   AY   G+
Sbjct: 435 QGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADFNKAIEINPQYAPAYMNRGI 494

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           A   + +Y+ A   + KAI ++     A+ + +     L + + A+  L + + I+ +F+
Sbjct: 495 AKYDLKDYQGAIADYSKAITINPQHAIAFNNRSNAKDQLGDHQGAISDLNRAIEINPQFA 554

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            A++ RG   + LG H+ AI D +  + I+P   E    R      +G Y+ AI DY+ A
Sbjct: 555 DAFNNRGATKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADYNKA 614

Query: 646 LDLE 649
           ++++
Sbjct: 615 IEID 618



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 129/272 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI + N G Y  AI+ +++ +  +P   E    RG  +      + AI+DF +AI+ N
Sbjct: 423 NRGIVKKNLGDYQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIADFNKAIEIN 482

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A+  L +   AI D SKA+   P  A   + R     +  D   A+ D
Sbjct: 483 PQYAPAYMNRGIAKYDLKDYQGAIADYSKAITINPQHAIAFNNRSNAKDQLGDHQGAISD 542

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L+  ++++ +   A+   G     +G+++ A   + KAI ++    E + +     + L 
Sbjct: 543 LNRAIEINPQFADAFNNRGATKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLG 602

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N + A+    + + ID +++ AY+ RG   +  G  + A+KD +  L I P++   L  R
Sbjct: 603 NYQGAIADYNKAIEIDPQYASAYNNRGWSKYLQGDFQDALKDANKALAITPNDGATLDTR 662

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
               HA+G+ R A KD   A  L      +++
Sbjct: 663 GLAKHALGQDRSACKDLKRASSLGYQGTSQYL 694



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 119/236 (50%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           R  A+    + + AISD  +A++ NP    A++ RG A+  L +   AI D +KA+E  P
Sbjct: 322 RAYAKDALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINP 381

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
                 + RG+V     D+  A+ D +  ++LD ++  AY   G+   ++G+Y+ A   +
Sbjct: 382 QHTGPFNNRGLVKKNLGDYQGAIADYNKAIELDPQHAYAYYNRGIVKKNLGDYQGAIADY 441

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            KAI ++    E + +     + L N + A+    + + I+ +++ AY  RG+  + L  
Sbjct: 442 NKAIAINPQLAETYSNRGGIKRVLGNYQGAIADFNKAIEINPQYAPAYMNRGIAKYDLKD 501

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           ++ AI D S  + I+P +      R++    +G+++ AI D + A+++     + F
Sbjct: 502 YQGAIADYSKAITINPQHAIAFNNRSNAKDQLGDHQGAISDLNRAIEINPQFADAF 557



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 103/231 (44%), Gaps = 40/231 (17%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R  A+ AL +   AI DL+KALE  P  A     RG    K KD+  A+ D +  ++++ 
Sbjct: 322 RAYAKDALNDYQGAISDLNKALEINPQYAPAYENRGNAKKKLKDYQGAITDYNKAIEINP 381

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           ++   +   GL   ++G+Y+ A                           +A+  KA+E  
Sbjct: 382 QHTGPFNNRGLVKKNLGDYQGA---------------------------IADYNKAIE-- 412

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
                +D + + AY+ RG++   LG ++ AI D +  + I+P   E    R      +G 
Sbjct: 413 -----LDPQHAYAYYNRGIVKKNLGDYQGAIADYNKAIAINPQLAETYSNRGGIKRVLGN 467

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT-ASKINSE 679
           Y+ AI D++ A+++       ++ + +A      YQ  IA Y+ A  IN +
Sbjct: 468 YQGAIADFNKAIEINPQYAPAYMNRGIAKYDLKDYQGAIADYSKAITINPQ 518



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 100/231 (43%), Gaps = 36/231 (15%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RGIA+ +   Y  AI+ + + +  +P +  A   R  A+    + + AISD   AI+ 
Sbjct: 490 MNRGIAKYDLKDYQGAIADYSKAITINPQHAIAFNNRSNAKDQLGDHQGAISDLNRAIEI 549

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   +A+  RG  +  LG+   AI D +KA+   P  A+    RG +     ++  A+ 
Sbjct: 550 NPQFADAFNNRGATKYELGDHQGAIADYNKAIAINPQLAETYSNRGGIKRVLGNYQGAIA 609

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  +++D +  SAY   G +               K +Q D             +QD 
Sbjct: 610 DYNKAIEIDPQYASAYNNRGWS---------------KYLQGD-------------FQD- 640

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL--SSGLG 613
                AL+   + L I          RGL  H LGQ + A KDL  +S LG
Sbjct: 641 -----ALKDANKALAITPNDGATLDTRGLAKHALGQDRSACKDLKRASSLG 686


>gi|159028674|emb|CAO88145.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 837

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 6/289 (2%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI+ +D+ L+  P Y EA   RG A      LE AI+ +  A++  P   EAW  R
Sbjct: 487 QYQEAIASYDRALEIKPDYHEAWYNRGIALDDLGRLEEAIASYDRALEIKPDKHEAWYNR 546

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   LG   +AI    +ALE +P+  +  + RG        F  A+      +++  +
Sbjct: 547 GFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPD 606

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              A+   G AL ++G +++A  ++ +A+++  +  EAW +      DL   E+A+    
Sbjct: 607 KHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEEAIASFD 666

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + L I     +A++ RG  L  LG+ ++AI      L I P   E  Y R      +G +
Sbjct: 667 RALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRF 726

Query: 636 REAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKINS 678
            +AI  YD AL+++ D  E +      L  L  +++ IA +  A KINS
Sbjct: 727 EQAIASYDRALEIKPDDHEAWNNRGIALGNLGRFEEAIASFDRAIKINS 775



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 144/312 (46%), Gaps = 21/312 (6%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+  F++++   P + +    RGT   +  + + AI+ +  A++  P   EAW  R
Sbjct: 453 RYQDALKGFNRLVSFAPQWEDGWFYRGTTFGYLEQYQEAIASYDRALEIKPDYHEAWYNR 512

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   LG   EAI    +ALE +P+  +  + RG        F  A+      +++  +
Sbjct: 513 GIALDDLGRLEEAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPD 572

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSE 568
              A+   G AL ++G +++A  ++ +A+++  +  EAW       G+L +F Q +A+ +
Sbjct: 573 KHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYD 632

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +ALE       I     +A++ RG+ L  LG+ ++AI      L I P   E  Y R   
Sbjct: 633 RALE-------IKPDDHEAWNNRGIALDDLGRLEEAIASFDRALEIKPDKHEAWYNRGFA 685

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGD 688
              +G + +AI  YD AL+++ D  E       A+Y +  AL    +       +D   +
Sbjct: 686 LGNLGRFEQAIASYDRALEIKPDKHE-------AWYNRGFALGNLGRFEQAIASYDRALE 738

Query: 689 IDPLFKEYWCKR 700
           I P   E W  R
Sbjct: 739 IKPDDHEAWNNR 750



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 134/272 (49%), Gaps = 14/272 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G++  AI+ +D+ L+  P   EA   RG A       E AI+ +  A++  
Sbjct: 545 NRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIK 604

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   +AI    +ALE +P+  +  + RGI          A+  
Sbjct: 605 PDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEEAIAS 664

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
               +++  +   A+   G AL ++G +++A  ++ +A+++  +  EAW       G+L 
Sbjct: 665 FDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLG 724

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           +F Q +A+ ++ALE       I     +A++ RG+ L  LG+ ++AI      + I+ ++
Sbjct: 725 RFEQAIASYDRALE-------IKPDDHEAWNNRGIALGNLGRFEEAIASFDRAIKINSND 777

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            +  Y +A CY        AI++   A++L++
Sbjct: 778 ADAYYNKACCYGLQNNVELAIENLQRAINLDV 809



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 128/270 (47%), Gaps = 14/270 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  + G+   AI+ +D+ L+  P   EA   RG A       E AI+ +  A++  
Sbjct: 511 NRGIALDDLGRLEEAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIK 570

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   +AI    +ALE +P+  +  + RG        F  A+  
Sbjct: 571 PDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIAS 630

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
               +++  ++  A+   G+AL  +G  ++A  +  +A+++  +  EAW       G+L 
Sbjct: 631 YDRALEIKPDDHEAWNNRGIALDDLGRLEEAIASFDRALEIKPDKHEAWYNRGFALGNLG 690

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           +F Q +A+ ++ALE       I     +A++ RG  L  LG+ ++AI      L I P +
Sbjct: 691 RFEQAIASYDRALE-------IKPDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDD 743

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDL 648
            E    R      +G + EAI  +D A+ +
Sbjct: 744 HEAWNNRGIALGNLGRFEEAIASFDRAIKI 773



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 101/200 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G++  AI+ +D+ L+  P   EA   RG A      LE AI+ F  A++  
Sbjct: 613 NRGFALGNLGRFEQAIASYDRALEIKPDDHEAWNNRGIALDDLGRLEEAIASFDRALEIK 672

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   +AI    +ALE +P+  +  + RG        F  A+  
Sbjct: 673 PDKHEAWYNRGFALGNLGRFEQAIASYDRALEIKPDKHEAWYNRGFALGNLGRFEQAIAS 732

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  ++  A+   G+AL ++G +++A  +  +AI+++ N  +A+ +    Y    
Sbjct: 733 YDRALEIKPDDHEAWNNRGIALGNLGRFEEAIASFDRAIKINSNDADAYYNKACCYGLQN 792

Query: 566 NSEKALECLQQVLYIDKRFS 585
           N E A+E LQ+ + +D ++ 
Sbjct: 793 NVELAIENLQRAINLDVKYQ 812



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 1/88 (1%)

Query: 45  KLCSLRNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLL 103
           KL  L+ +  A++  + L++ + + +D    R   +  LE ++  I   D+AL++ P   
Sbjct: 447 KLYELKRYQDALKGFNRLVSFAPQWEDGWFYRGTTFGYLEQYQEAIASYDRALEIKPDYH 506

Query: 104 QAYILKGCAFSALGRKEEALSVWEKGYE 131
           +A+  +G A   LGR EEA++ +++  E
Sbjct: 507 EAWYNRGIALDDLGRLEEAIASYDRALE 534


>gi|145524609|ref|XP_001448132.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415665|emb|CAK80735.1| unnamed protein product [Paramecium tetraurelia]
          Length = 879

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 138/274 (50%), Gaps = 1/274 (0%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           +K IS D+  S+G     +  +  AI  +   L  +P + +++  RG A    R    AI
Sbjct: 265 NKKIS-DWFHSQGFDARKKEDFIKAIEFYTMALMFNPNHFKSIFNRGFAFDKLRMYNDAI 323

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           SD+T+AI+ +     A+  RG +    G+   AI+D +K++E +P+ AD  H +G    K
Sbjct: 324 SDYTKAIEMDSKNAYAYYNRGISYDKKGDYNLAIKDFAKSIELDPSKADFYHNKGFAMKK 383

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
                 A+ + + C++LDK +  AY         +G++ KA++ +L A  +  N      
Sbjct: 384 KNLVREAILEFNECIRLDKNHFKAYYNRANCYEKLGDFDKAQQDYLIANNVVPNNPNTLT 443

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           H+          E AL+     L ID+ ++ AY+ RGL+   +G+ +KA +D +  + I+
Sbjct: 444 HIGILMDRQQKLEDALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKAIEIE 503

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           P N   ++ R  C  ++ ++ EA++D+  AL L+
Sbjct: 504 PQNPVYIHNRGCCKRSMNKFEEALEDFKKALSLD 537



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 34/224 (15%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q++LE A+  F  +++ + +   A+  RG     +GE  +A QD +KA+E EP +   +H
Sbjct: 452 QQKLEDALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKAIEIEPQNPVYIH 511

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG        F  A+ED    + LD +N   Y+ +GL L  + ++              
Sbjct: 512 NRGCCKRSMNKFEEALEDFKKALSLDSKNPIIYSNMGLVLRKMEDF-------------- 557

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
                               E A+ C  Q L   +  ++  + RG  L  LGQ  +AI D
Sbjct: 558 --------------------ETAVYCYSQELIYSQENTRTLNNRGYCLAKLGQFDEAIAD 597

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            +  + +DP NI  +Y R  C   IGE+R+AI+D+ + + L+ D
Sbjct: 598 YTKAINLDPVNIHAIYNRGICNERIGEFRKAIEDFTSVIQLQND 641



 Score = 47.8 bits (112), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           + A++   ++L  D      Y+LRG     LGQ   AI+D S  L +D +++   + RAS
Sbjct: 59  QTAIQDCNKLLETDSDNVGGYYLRGCANEKLGQIDLAIEDFSKVLSLDENHVNAAFARAS 118

Query: 628 CYHAIGEYREAIKDYDAALD 647
           C +  G++  AI+DY  AL+
Sbjct: 119 CLNLKGDFAGAIEDYTRALE 138



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 75/351 (21%), Positives = 135/351 (38%), Gaps = 76/351 (21%)

Query: 385 LSRGIAQVNEGKYASAISIFDQI------LKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           L++  +Q    KY  +I+I + I      LK  P + +AL  R +A   + E + AI D 
Sbjct: 6   LTKLPSQQKVPKYRPSINIDNLIAICTGKLKNCPNHKKALYIRASAYIKKGEYQTAIQDC 65

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFK 497
            + ++++      +  RG A   LG+   AI+D SK L  + N  +    R   +N K  
Sbjct: 66  NKLLETDSDNVGGYYLRGCANEKLGQIDLAIEDFSKVLSLDENHVNAAFARASCLNLK-G 124

Query: 498 DFNAAVEDLSACVKLD-----------------------KENKSAYTYLGLALSSIGEYK 534
           DF  A+ED +  ++ D                       K+     T      +   +Y+
Sbjct: 125 DFAGAIEDYTRALEKDNAKSLNLSNSINKRSLLRNSSMKKDEPYPKTEAFQFTTKKNKYQ 184

Query: 535 KAEEAHLKAIQLDRNFLE-------------AWGHLTQFYQDLANSEKALECLQQVLYID 581
           + EE  L   Q D  +L+             ++      Y  +  +E  ++   Q+  ID
Sbjct: 185 QPEEDDLMNPQNDEEYLQNDQSQIQNQPQQTSFMSQNPLYTSIDANELNIQRPSQI--ID 242

Query: 582 KRFSKA-----------------------YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           K  S+                        +H +G          KAI+  +  L  +P++
Sbjct: 243 KEISQPMQQQLISMIPENIQNDNKKISDWFHSQGFDARKKEDFIKAIEFYTMALMFNPNH 302

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
            + ++ R   +  +  Y +AI DY  A  +E+DS   +     A+Y + I+
Sbjct: 303 FKSIFNRGFAFDKLRMYNDAISDYTKA--IEMDSKNAY-----AYYNRGIS 346


>gi|355570991|ref|ZP_09042261.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea tarda
            NOBI-1]
 gi|354826273|gb|EHF10489.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea tarda
            NOBI-1]
          Length = 1104

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 157/664 (23%), Positives = 264/664 (39%), Gaps = 65/664 (9%)

Query: 12   RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKL----CSLRNWSKAIRILDSLLAQS 66
            + N + + I E  + + +      A+  R  E AK+     ++R++S+A+ I        
Sbjct: 452  KANLSDRAISEFTKALEIRPAYPDALYQRGCEFAKIGLSDMAVRDFSRALEIRGQFF--- 508

Query: 67   YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
               + +  RA  YS+  L +    D   AL L+PT    Y+ +G   S  G+ EEAL+ +
Sbjct: 509  ---EALVARAEQYSRKGLSERATEDLTAALALEPTSAGLYVRRGIEQSRSGKIEEALADF 565

Query: 127  EK--GYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDK 184
             K  G E +   +AD       +  L   KQ R      D+S  +         L   D 
Sbjct: 566  SKAIGMEPS---NADAY----FQRALILQKQGRFEESASDISRVIE--------LRPADA 610

Query: 185  MSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDE----AKGGSSVPVSKSG 240
             +        S++ +SS    D S          D   GR  E     +   +V    + 
Sbjct: 611  QAYLFRGRQNSELGNSSEAIADFSRALEIDPRLFDAYIGRGQERSRCGQPEKAVEDYSNA 670

Query: 241  LHINGK-LREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGR 299
            + +NG+ +  ++      S   +   A  D S    Q+  D  I    + +  + ER G 
Sbjct: 671  IRLNGRSVEALTARATEYSRLGRYEDAVEDLSRALEQAPGDVSIL---LARGLLYERLGM 727

Query: 300  QTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETS 359
                  D                     YSK    D     +  +R  L     +  E  
Sbjct: 728  IDEAIAD---------------------YSKVIEIDPGHEKAYINRGNLLAGKGLSSEAI 766

Query: 360  NEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
             +  R     V  I+   +++     +RGI     G    AI    + +   P   EA  
Sbjct: 767  ADFSR-----VIEINPGNAVAF---YNRGIEYGERGMLDEAIMDLGKAVMLRPDLAEAYY 818

Query: 420  GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
             RG A   +  LE AI+D+  A++ +P   +A+  RG A AALG   EAI+D S+A+E  
Sbjct: 819  NRGVAYHKKGMLEEAIADYNRALELSPDNEKAYNNRGNAHAALGMYDEAIEDFSRAIEIN 878

Query: 480  PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
            P++    + RGI   K      A+ED S  + +  +   AY   G+A   +  Y++A   
Sbjct: 879  PDNPTAYYNRGIEYGKKGLIEKAMEDFSRAIAIKPDLAEAYYNRGVAYQRVERYEEAIAD 938

Query: 540  HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
            + +AIQ+     +A+ +    +  L    +A+    + + I+     AY+ RG+     G
Sbjct: 939  YSRAIQISPANEKAYNNRGNAHAALGMYNEAVSDFSRAIEINPDNPTAYYNRGIEYGKKG 998

Query: 600  QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
               +AI D S  +G+ P   E  Y   + Y+     REAI+++D AL ++      F+ +
Sbjct: 999  FFDEAIADFSKAVGLRPDLAEAYYNMGNIYYNRNMCREAIREFDRALGVKPGYARAFLNK 1058

Query: 660  CLAF 663
             LA+
Sbjct: 1059 ALAY 1062



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 161/673 (23%), Positives = 278/673 (41%), Gaps = 88/673 (13%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITAR-IELAKL----CSLRNWSKAIRILDSLLAQSY 67
           LN+    I +    V +D+    A   R +E A++     ++ ++SKAI  L+   A +Y
Sbjct: 84  LNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYELAIADFSKAIS-LNPSYAAAY 142

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS--- 124
                 NR   +++  +H+  I D  +A +LDP+  +A   +G  FS LG  E+A++   
Sbjct: 143 N-----NRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEFSRLGHFEDAVADYT 197

Query: 125 ------------VWEKGYEHA-LHQS-ADLKQFLE-LEELLTAAKQDRSVTCEYDVSNSM 169
                       ++ +G  +  L QS A +  +L+ LE+  + A+   ++  EY      
Sbjct: 198 RALEITPEKADILYNRGLAYGKLGQSEAAIADYLQCLEKNPSYAEAHNNLGVEY------ 251

Query: 170 SSLTVSESGLNANDKMSETS----ENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRS 225
           S L + E+ L+   K  E +    E +N   +  +     D  E  ++ S   ++    S
Sbjct: 252 SHLGLLETALDHYAKAIEINPSFVEAYNNRGVLFNRMGRFD--EAIAEFSRALEII---S 306

Query: 226 DEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKST----------HASRDAS-EIN 274
           +E +  +  P  ++ L          +   G  +  ++T           A R  + EIN
Sbjct: 307 EETQAEAVTPQPEASLSGMAAETAPGQGAPGGEEKGETTIPPVEELVEDPAIRQLTDEIN 366

Query: 275 RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSIS 334
           R S DD ++ N    +     R G+      D    +  D   +         Y +  + 
Sbjct: 367 R-SPDDPELYN---RRGVEYSRLGQSEKAIEDFTRAIDIDPGYIEAYFNRGNEYDRLGMV 422

Query: 335 DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNE 394
           D   +D T +                  K N KF             +   +RGI     
Sbjct: 423 DEAIADYTHA-----------------LKINPKFA------------EACFARGIEYQKA 453

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
                AIS F + L+  P YP+AL  RG   A     + A+ DF+ A++      EA   
Sbjct: 454 NLSDRAISEFTKALEIRPAYPDALYQRGCEFAKIGLSDMAVRDFSRALEIRGQFFEALVA 513

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R +  +  G S  A +DL+ AL  EP SA +   RGI   +      A+ D S  + ++ 
Sbjct: 514 RAEQYSRKGLSERATEDLTAALALEPTSAGLYVRRGIEQSRSGKIEEALADFSKAIGMEP 573

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            N  AY    L L   G ++++     + I+L     +A+    +   +L NS +A+   
Sbjct: 574 SNADAYFQRALILQKQGRFEESASDISRVIELRPADAQAYLFRGRQNSELGNSSEAIADF 633

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L ID R   AY  RG      GQ +KA++D S+ + ++  ++E L  RA+ Y  +G 
Sbjct: 634 SRALEIDPRLFDAYIGRGQERSRCGQPEKAVEDYSNAIRLNGRSVEALTARATEYSRLGR 693

Query: 635 YREAIKDYDAALD 647
           Y +A++D   AL+
Sbjct: 694 YEDAVEDLSRALE 706



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 134/284 (47%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            ++RG     +G  + AI+ F ++++ +P    A   RG     +  L+ AI D  +A+  
Sbjct: 750  INRGNLLAGKGLSSEAIADFSRVIEINPGNAVAFYNRGIEYGERGMLDEAIMDLGKAVML 809

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             P   EA+  RG A    G   EAI D ++ALE  P++    + RG  +     ++ A+E
Sbjct: 810  RPDLAEAYYNRGVAYHKKGMLEEAIADYNRALELSPDNEKAYNNRGNAHAALGMYDEAIE 869

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            D S  ++++ +N +AY   G+     G  +KA E   +AI +  +  EA+ +    YQ +
Sbjct: 870  DFSRAIEINPDNPTAYYNRGIEYGKKGLIEKAMEDFSRAIAIKPDLAEAYYNRGVAYQRV 929

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               E+A+    + + I     KAY+ RG     LG + +A+ D S  + I+P N    Y 
Sbjct: 930  ERYEEAIADYSRAIQISPANEKAYNNRGNAHAALGMYNEAVSDFSRAIEINPDNPTAYYN 989

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
            R   Y   G + EAI D+  A+ L  D  E +      +Y + +
Sbjct: 990  RGIEYGKKGFFDEAIADFSKAVGLRPDLAEAYYNMGNIYYNRNM 1033



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 109/227 (48%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E    RG A   +   + AI+D+T AI+ NP   EA+  RG A+A   +   AI+D S A
Sbjct: 4   EIYYNRGIAYHKKGLFDEAIADYTRAIEINPDDAEAYHNRGVAKAGKHDYPGAIEDYSAA 63

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           +   P+ ++  + RG+          A+ D ++ V LD +   AY   GL  + IGEY+ 
Sbjct: 64  IRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYEL 123

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A     KAI L+ ++  A+ +    +      EKA+E   +   +D  FS+A   RG+  
Sbjct: 124 AIADFSKAISLNPSYAAAYNNRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIEF 183

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
             LG  + A+ D +  L I P   + LY R   Y  +G+   AI DY
Sbjct: 184 SRLGHFEDAVADYTRALEITPEKADILYNRGLAYGKLGQSEAAIADY 230



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 148/297 (49%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           ++R+ + +       L RG      G  + AI+ F + L+ DP   +A IGRG  R+   
Sbjct: 599 ISRVIELRPADAQAYLFRGRQNSELGNSSEAIADFSRALEIDPRLFDAYIGRGQERSRCG 658

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + E A+ D++ AI+ N  + EA   R    + LG   +A++DLS+ALE  P    IL  R
Sbjct: 659 QPEKAVEDYSNAIRLNGRSVEALTARATEYSRLGRYEDAVEDLSRALEQAPGDVSILLAR 718

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G++  +    + A+ D S  +++D  ++ AY   G  L+  G   +A     + I+++  
Sbjct: 719 GLLYERLGMIDEAIADYSKVIEIDPGHEKAYINRGNLLAGKGLSSEAIADFSRVIEINPG 778

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
              A+ +    Y +    ++A+  L + + +    ++AY+ RG+  H  G  ++AI D +
Sbjct: 779 NAVAFYNRGIEYGERGMLDEAIMDLGKAVMLRPDLAEAYYNRGVAYHKKGMLEEAIADYN 838

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
             L + P N +    R + + A+G Y EAI+D+  A+++  D+   +  + + + +K
Sbjct: 839 RALELSPDNEKAYNNRGNAHAALGMYDEAIEDFSRAIEINPDNPTAYYNRGIEYGKK 895



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 110/215 (51%)

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
           GE +  RG A    G   EAI D ++A+E  P+ A+  H RG+      D+  A+ED SA
Sbjct: 3   GEIYYNRGIAYHKKGLFDEAIADYTRAIEINPDDAEAYHNRGVAKAGKHDYPGAIEDYSA 62

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++++     A+   G+A S +   + A      A+ LD +F+EA+ +    Y  +   E
Sbjct: 63  AIRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLDTDFVEAYYNRGLEYARIGEYE 122

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A+    + + ++  ++ AY+ RG++    G H+KAI+D +    +DPS  E L+ R   
Sbjct: 123 LAIADFSKAISLNPSYAAAYNNRGVIHARRGMHEKAIEDYTRAFELDPSFSEALFNRGIE 182

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           +  +G + +A+ DY  AL++  +  +    + LA+
Sbjct: 183 FSRLGHFEDAVADYTRALEITPEKADILYNRGLAY 217



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 128/263 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+  +  Y  AI  +   ++ +P + EA   RG A +     E AISDFT A+  +
Sbjct: 42  NRGVAKAGKHDYPGAIEDYSAAIRINPHFSEAFYNRGVAYSLLNRPENAISDFTSAVNLD 101

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EA+  RG   A +GE   AI D SKA+   P+ A   + RG+++ +      A+ED
Sbjct: 102 TDFVEAYYNRGLEYARIGEYELAIADFSKAISLNPSYAAAYNNRGVIHARRGMHEKAIED 161

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +   +LD     A    G+  S +G ++ A   + +A+++     +   +    Y  L 
Sbjct: 162 YTRAFELDPSFSEALFNRGIEFSRLGHFEDAVADYTRALEITPEKADILYNRGLAYGKLG 221

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            SE A+    Q L  +  +++A++  G+    LG  + A+   +  + I+PS +E    R
Sbjct: 222 QSEAAIADYLQCLEKNPSYAEAHNNLGVEYSHLGLLETALDHYAKAIEINPSFVEAYNNR 281

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
              ++ +G + EAI ++  AL++
Sbjct: 282 GVLFNRMGRFDEAIAEFSRALEI 304



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 138/317 (43%), Gaps = 33/317 (10%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D   +RG+A    G+  +AI+ + Q L+++P Y EA    G   +    LE A+  + +
Sbjct: 207 ADILYNRGLAYGKLGQSEAAIADYLQCLEKNPSYAEAHNNLGVEYSHLGLLETALDHYAK 266

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADIL------------ 486
           AI+ NPS  EA+  RG     +G   EAI + S+ALE   E   A+ +            
Sbjct: 267 AIEINPSFVEAYNNRGVLFNRMGRFDEAIAEFSRALEIISEETQAEAVTPQPEASLSGMA 326

Query: 487 ------------HERGIVNFKFKDFNAAVEDLSACVKLDKENKSA-----YTYLGLALSS 529
                        E+G            VED +     D+ N+S      Y   G+  S 
Sbjct: 327 AETAPGQGAPGGEEKGETTIP--PVEELVEDPAIRQLTDEINRSPDDPELYNRRGVEYSR 384

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +G+ +KA E   +AI +D  ++EA+ +    Y  L   ++A+      L I+ +F++A  
Sbjct: 385 LGQSEKAIEDFTRAIDIDPGYIEAYFNRGNEYDRLGMVDEAIADYTHALKINPKFAEACF 444

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            RG+         +AI + +  L I P+  + LY R   +  IG    A++D+  AL++ 
Sbjct: 445 ARGIEYQKANLSDRAISEFTKALEIRPAYPDALYQRGCEFAKIGLSDMAVRDFSRALEIR 504

Query: 650 LDSMEKFVLQCLAFYQK 666
               E  V +   + +K
Sbjct: 505 GQFFEALVARAEQYSRK 521



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 102/220 (46%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG A    G Y  AI  F + ++ +P  P A   RG     +  +E A+ DF+ AI   
Sbjct: 853  NRGNAHAALGMYDEAIEDFSRAIEINPDNPTAYYNRGIEYGKKGLIEKAMEDFSRAIAIK 912

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P   EA+  RG A   +    EAI D S+A++  P +    + RG  +     +N AV D
Sbjct: 913  PDLAEAYYNRGVAYQRVERYEEAIADYSRAIQISPANEKAYNNRGNAHAALGMYNEAVSD 972

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             S  ++++ +N +AY   G+     G + +A     KA+ L  +  EA+ ++   Y +  
Sbjct: 973  FSRAIEINPDNPTAYYNRGIEYGKKGFFDEAIADFSKAVGLRPDLAEAYYNMGNIYYNRN 1032

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
               +A+    + L +   +++A+  + L    L   ++AI
Sbjct: 1033 MCREAIREFDRALGVKPGYARAFLNKALAYEKLSMTEEAI 1072



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 96/201 (47%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RGI    +G    A+  F + +   P   EA   RG A       E AI+D++ AIQ +
Sbjct: 887  NRGIEYGKKGLIEKAMEDFSRAIAIKPDLAEAYYNRGVAYQRVERYEEAIADYSRAIQIS 946

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+  +A+  RG A AALG   EA+ D S+A+E  P++    + RGI   K   F+ A+ D
Sbjct: 947  PANEKAYNNRGNAHAALGMYNEAVSDFSRAIEINPDNPTAYYNRGIEYGKKGFFDEAIAD 1006

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             S  V L  +   AY  +G    +    ++A     +A+ +   +  A+ +    Y+ L+
Sbjct: 1007 FSKAVGLRPDLAEAYYNMGNIYYNRNMCREAIREFDRALGVKPGYARAFLNKALAYEKLS 1066

Query: 566  NSEKALECLQQVLYIDKRFSK 586
             +E+A+   +  L   +  SK
Sbjct: 1067 MTEEAIAAYEGFLKFARNESK 1087



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 34/260 (13%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI   T+ I  +P   E + RRG   + LG+S +AI+D ++A++ +P   +    RG   
Sbjct: 357 AIRQLTDEINRSPDDPELYNRRGVEYSRLGQSEKAIEDFTRAIDIDPGYIEAYFNRGNEY 416

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSA-------YTYLGLALSSIGEYKKAEEAHL----- 541
            +    + A+ D +  +K++ +   A       Y    L+  +I E+ KA E        
Sbjct: 417 DRLGMVDEAIADYTHALKINPKFAEACFARGIEYQKANLSDRAISEFTKALEIRPAYPDA 476

Query: 542 ----------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
                                 +A+++   F EA     + Y     SE+A E L   L 
Sbjct: 477 LYQRGCEFAKIGLSDMAVRDFSRALEIRGQFFEALVARAEQYSRKGLSERATEDLTAALA 536

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           ++   +  Y  RG+     G+ ++A+ D S  +G++PSN +  + RA      G + E+ 
Sbjct: 537 LEPTSAGLYVRRGIEQSRSGKIEEALADFSKAIGMEPSNADAYFQRALILQKQGRFEESA 596

Query: 640 KDYDAALDLELDSMEKFVLQ 659
            D    ++L     + ++ +
Sbjct: 597 SDISRVIELRPADAQAYLFR 616



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 8/98 (8%)

Query: 48   SLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
            ++ ++SKA+ +   L    Y + +I  NR  C       +  IR+ D+AL + P   +A+
Sbjct: 1003 AIADFSKAVGLRPDLAEAYYNMGNIYYNRNMC-------REAIREFDRALGVKPGYARAF 1055

Query: 107  ILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFL 144
            + K  A+  L   EEA++ +E   + A ++S +L  F+
Sbjct: 1056 LNKALAYEKLSMTEEAIAAYEGFLKFARNESKELVDFV 1093



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 10  RYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSY-E 68
           R R  +  K + +    +R++     A+TAR    +   L  +  A+  L   L Q+  +
Sbjct: 654 RSRCGQPEKAVEDYSNAIRLNGRSVEALTARA--TEYSRLGRYEDAVEDLSRALEQAPGD 711

Query: 69  IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
           +  +  R   Y +L +    I D  K +++DP   +AYI +G   +  G   EA++ + +
Sbjct: 712 VSILLARGLLYERLGMIDEAIADYSKVIEIDPGHEKAYINRGNLLAGKGLSSEAIADFSR 771


>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
          Length = 927

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 131/262 (50%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A  + G Y  AI  +++ ++ DP   EAL  +G A       E AI    +AI+ NP 
Sbjct: 295 GFAVASSGNYEEAIKFYNKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQ 354

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              AW  +G     LG   EA++   KA E +P  +   + +G       +++ A++   
Sbjct: 355 NAVAWYDKGSILKNLGNYEEAVEAFDKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYD 414

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +++D ++   +   G+ALS++G Y+++ +A  KAI+++ +    W +       L N 
Sbjct: 415 KAIEIDPQDPGPWNNKGIALSNLGSYEESIKAFDKAIEINLSSSVTWANKGLVLSILGNY 474

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E A++   + + ID R S A+  +G  L+  G+++  I      + +DP N++    +  
Sbjct: 475 EGAIKAFDKSIEIDPRNSIAWVNKGNALYNSGEYEGVITACDKAIELDPKNLDAWTNKGK 534

Query: 628 CYHAIGEYREAIKDYDAALDLE 649
              ++G+Y EAIK YD AL++E
Sbjct: 535 ALSSLGDYEEAIKAYDKALEIE 556



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 41/306 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG A  N G Y  AI+ +D+ ++ DP  PEA   +G A +     E AI  + +AI+ 
Sbjct: 81  IVRGDALANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAYNKAIEL 140

Query: 445 NPS------------------------------AGE-----------AWKRRGQARAALG 463
           +P                               A E           AW  +G A   LG
Sbjct: 141 DPQNSLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYNKGSALQELG 200

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
              EAI   +KA+E  P   +  +++G+  +   ++  AV+  +  ++LD +N   +   
Sbjct: 201 NYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWANK 260

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G ALS +  Y++A  A+ ++I+LD     AW  L        N E+A++   + + ID +
Sbjct: 261 GNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQ 320

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            S+A   +G  L+ +G  ++AIK L   + ++P N    Y + S    +G Y EA++ +D
Sbjct: 321 NSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAFD 380

Query: 644 AALDLE 649
            A +L+
Sbjct: 381 KATELD 386



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 161/339 (47%), Gaps = 10/339 (2%)

Query: 365 NKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N +  +T  +K+  I  +++     +G+A  N G Y  A+   ++ ++ DP  P     +
Sbjct: 201 NYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRVWANK 260

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G A +     E AI+ + E+I+ +P    AW   G A A+ G   EAI+  +KA+E +P 
Sbjct: 261 GNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQ 320

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           +++ L  +G   +   +   A++ L   ++++ +N  A+   G  L ++G Y++A EA  
Sbjct: 321 NSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEAFD 380

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KA +LD     AW +       L N ++A++   + + ID +    ++ +G+ L  LG +
Sbjct: 381 KATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLGSY 440

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           +++IK     + I+ S+      +      +G Y  AIK +D +++++           +
Sbjct: 441 EESIKAFDKAIEINLSSSVTWANKGLVLSILGNYEGAIKAFDKSIEID-------PRNSI 493

Query: 662 AFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           A+  K  ALY + +        D   ++DP   + W  +
Sbjct: 494 AWVNKGNALYNSGEYEGVITACDKAIELDPKNLDAWTNK 532



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 135/276 (48%), Gaps = 1/276 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+A    G Y  ++  +D+ ++ DP Y +A   +G +    +  E AI  + +AI+  P
Sbjct: 601 KGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKNYEEAIKAYDKAIELKP 660

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  +G A        EA++   KA+E     +   + +G       D+  A+   
Sbjct: 661 QNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLYDYEGALNAY 720

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  V+++ +   A+   G  L S+G Y++A  A  K +++D +   AW +       L N
Sbjct: 721 NKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNKGIALSSLGN 780

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A++   + L ID + S  +  +GL L   G++++A+K  +  + ID SN E    R 
Sbjct: 781 YEEAMKSFDKALEIDSQNSLIWSNKGLALFEFGKYEEAVKAYNKTIEIDQSNTETWNNRG 840

Query: 627 SCYHAIGEYREAIKDYDAALDLELD-SMEKFVLQCL 661
           S +  IG Y EA+K+Y+  ++L+ + S+  +   CL
Sbjct: 841 SAFFLIGNYEEAMKNYNKTIELDPEYSLAWYNRACL 876



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 142/291 (48%), Gaps = 5/291 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A      Y  AI+ +++ ++ DP    A  G G A A     E AI  + +AI+ +
Sbjct: 259 NKGNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEID 318

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA   +G A   +G   EAI+ L KA+E  P +A   +++G +     ++  AVE 
Sbjct: 319 PQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGNYEEAVEA 378

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                +LD +  SA+   G ALSS+G Y +A +A+ KAI++D      W +      +L 
Sbjct: 379 FDKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLG 438

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + E++++   + + I+   S  +  +GL+L  LG ++ AIK     + IDP N      +
Sbjct: 439 SYEESIKAFDKAIEINLSSSVTWANKGLVLSILGNYEGAIKAFDKSIEIDPRNSIAWVNK 498

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIALY 671
            +  +  GEY   I   D A++L+  +++ +      L  L  Y++ I  Y
Sbjct: 499 GNALYNSGEYEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKAY 549



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 149/322 (46%), Gaps = 8/322 (2%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           ++D   ++G A  + G Y  AI  +D+ L+ +P  P     R  A       E A+    
Sbjct: 525 NLDAWTNKGKALSSLGDYEEAIKAYDKALEIEPQDPLTWNNREIAFGHLNNYEEALRAHN 584

Query: 440 EAIQSNPSAGE-AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
             I S+    E +W  +G A    G   E+++   KA+E +P  AD    +G   F  K+
Sbjct: 585 REIVSDSEDPEVSWNDKGLALYYSGNYEESVKAYDKAIELDPEYADAWFNKGNSFFSLKN 644

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  A++     ++L  +N  A+   GLAL++   Y +A +++ KAI+L+     AW +  
Sbjct: 645 YEEAIKAYDKAIELKPQNSLAWNNKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKG 704

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                L + E AL    + + I+ ++S A++ +G  L  LG++++A+   +  L IDP N
Sbjct: 705 NTLSSLYDYEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHN 764

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
                 +     ++G Y EA+K +D A  LE+DS        L +  K +AL+   K   
Sbjct: 765 SFAWCNKGIALSSLGNYEEAMKSFDKA--LEIDSQ-----NSLIWSNKGLALFEFGKYEE 817

Query: 679 EFCWFDIDGDIDPLFKEYWCKR 700
               ++   +ID    E W  R
Sbjct: 818 AVKAYNKTIEIDQSNTETWNNR 839



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 150/309 (48%), Gaps = 20/309 (6%)

Query: 361 EAKRNKKFCVTRISK--------SKSISVD-----FRLSRGIAQVNEGK-------YASA 400
           EA  NK   ++ +S         +K+I +D     F  ++G      GK       Y  +
Sbjct: 112 EAWNNKGVALSNLSNYEEAIKAYNKAIELDPQNSLFWYNKGKTLYELGKQEESTKAYKES 171

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           +   +  ++ DP    A   +G+A       + AI+ + +AI+  P   EAW ++G A  
Sbjct: 172 LEASENAIELDPRNSLAWYNKGSALQELGNYQEAITAYNKAIEIYPEYKEAWYKKGLAFY 231

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
             G   EA++  +K +E +P +  +   +G    K   +  A+   +  ++LD +N  A+
Sbjct: 232 NSGNYEEAVKACNKTIELDPQNPRVWANKGNALSKLNSYEEAITAYNESIELDPQNSVAW 291

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
             LG A++S G Y++A + + KAI++D    EA  +      ++ N E+A++ L + + +
Sbjct: 292 NGLGFAVASSGNYEEAIKFYNKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIEV 351

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           + + + A++ +G +L  LG +++A++       +DP        + +   ++G Y EAIK
Sbjct: 352 NPQNAVAWYDKGSILKNLGNYEEAVEAFDKATELDPKKSSAWNNKGNALSSLGNYDEAIK 411

Query: 641 DYDAALDLE 649
            YD A++++
Sbjct: 412 AYDKAIEID 420



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 122/232 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A  N   YA A+  +D+ ++ +     A   +G   +   + E A++ + +A++ N
Sbjct: 668 NKGLALNNSSYYAEALKSYDKAIELNSQDSAAWNNKGNTLSSLYDYEGALNAYNKAVEIN 727

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  +G    +LG   EA+   +K LE +P+++     +GI      ++  A++ 
Sbjct: 728 PQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNKGIALSSLGNYEEAMKS 787

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++D +N   ++  GLAL   G+Y++A +A+ K I++D++  E W +    +  + 
Sbjct: 788 FDKALEIDSQNSLIWSNKGLALFEFGKYEEAVKAYNKTIEIDQSNTETWNNRGSAFFLIG 847

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
           N E+A++   + + +D  +S A++ R  L   +   +++I DL   + I+P+
Sbjct: 848 NYEEAMKNYNKTIELDPEYSLAWYNRACLYSLINDKEQSISDLKRAIEINPA 899



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 7/258 (2%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P A I RG A A     + AI+ + +AI+ +P   EAW  +G A + L    EAI+  +K
Sbjct: 77  PIAWIVRGDALANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAYNK 136

Query: 475 ALEFEP-------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           A+E +P       N    L+E G      K +  ++E     ++LD  N  A+   G AL
Sbjct: 137 AIELDPQNSLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYNKGSAL 196

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             +G Y++A  A+ KAI++   + EAW      + +  N E+A++   + + +D +  + 
Sbjct: 197 QELGNYQEAITAYNKAIEIYPEYKEAWYKKGLAFYNSGNYEEAVKACNKTIELDPQNPRV 256

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           +  +G  L  L  +++AI   +  + +DP N            + G Y EAIK Y+ A++
Sbjct: 257 WANKGNALSKLNSYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIE 316

Query: 648 LELDSMEKFVLQCLAFYQ 665
           ++  + E    +  A Y 
Sbjct: 317 IDPQNSEALSNKGFALYN 334



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 146/330 (44%), Gaps = 11/330 (3%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +K+I +D + S     +G A  N G    AI   D+ ++ +P    A   +G+       
Sbjct: 312 NKAIEIDPQNSEALSNKGFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSILKNLGN 371

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            E A+  F +A + +P    AW  +G A ++LG   EAI+   KA+E +P      + +G
Sbjct: 372 YEEAVEAFDKATELDPKKSSAWNNKGNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKG 431

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           I       +  +++     ++++  +   +   GL LS +G Y+ A +A  K+I++D   
Sbjct: 432 IALSNLGSYEESIKAFDKAIEINLSSSVTWANKGLVLSILGNYEGAIKAFDKSIEIDPRN 491

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             AW +      +    E  +    + + +D +   A+  +G  L  LG +++AIK    
Sbjct: 492 SIAWVNKGNALYNSGEYEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKAYDK 551

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
            L I+P +      R   +  +  Y EA++ ++  +  + +  E      +++  K +AL
Sbjct: 552 ALEIEPQDPLTWNNREIAFGHLNNYEEALRAHNREIVSDSEDPE------VSWNDKGLAL 605

Query: 671 YTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           Y +         +D   ++DP + + W  +
Sbjct: 606 YYSGNYEESVKAYDKAIELDPEYADAWFNK 635



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 98/188 (52%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A++ +++ ++ +P Y +A   +G         E A++ F + ++ +P    AW  +G
Sbjct: 713 YEGALNAYNKAVEINPQYSDAWYNKGNTLCSLGRYEEAVTAFNKTLEIDPHNSFAWCNKG 772

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            A ++LG   EA++   KALE +  ++ I   +G+  F+F  +  AV+  +  +++D+ N
Sbjct: 773 IALSSLGNYEEAMKSFDKALEIDSQNSLIWSNKGLALFEFGKYEEAVKAYNKTIEIDQSN 832

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
              +   G A   IG Y++A + + K I+LD  +  AW +    Y  + + E+++  L++
Sbjct: 833 TETWNNRGSAFFLIGNYEEAMKNYNKTIELDPEYSLAWYNRACLYSLINDKEQSISDLKR 892

Query: 577 VLYIDKRF 584
            + I+  +
Sbjct: 893 AIEINPAY 900



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 86/158 (54%), Gaps = 7/158 (4%)

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           E+  A+   G AL++ G YK+A  A+ KAI+LD    EAW +      +L+N E+A++  
Sbjct: 75  ESPIAWIVRGDALANSGNYKEAINAYDKAIELDPQNPEAWNNKGVALSNLSNYEEAIKAY 134

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQ-------HKKAIKDLSSGLGIDPSNIECLYLRAS 627
            + + +D + S  ++ +G  L+ LG+       +K++++   + + +DP N    Y + S
Sbjct: 135 NKAIELDPQNSLFWYNKGKTLYELGKQEESTKAYKESLEASENAIELDPRNSLAWYNKGS 194

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
               +G Y+EAI  Y+ A+++  +  E +  + LAFY 
Sbjct: 195 ALQELGNYQEAITAYNKAIEIYPEYKEAWYKKGLAFYN 232



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 13/126 (10%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
            L    ++I   D+ + ++  ++S++T   +   L  L N+  AI+  D    +S EI  
Sbjct: 436 NLGSYEESIKAFDKAIEIN--LSSSVTWANKGLVLSILGNYEGAIKAFD----KSIEIDP 489

Query: 72  ICNRAFC------YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
             + A+       Y+  E ++ VI  CDKA++LDP  L A+  KG A S+LG  EEA+  
Sbjct: 490 RNSIAWVNKGNALYNSGE-YEGVITACDKAIELDPKNLDAWTNKGKALSSLGDYEEAIKA 548

Query: 126 WEKGYE 131
           ++K  E
Sbjct: 549 YDKALE 554


>gi|167392256|ref|XP_001733493.1| tetratricopeptide repeat protein, tpr [Entamoeba dispar SAW760]
 gi|165895951|gb|EDR23526.1| tetratricopeptide repeat protein, tpr, putative [Entamoeba dispar
           SAW760]
          Length = 454

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 103/187 (55%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           +  I +D  +++G   VN GK   AI+ FDQ+L+  P      +GRG+A+A   +L+ A+
Sbjct: 228 TNDIELDREIAKGYLYVNTGKLKEAITHFDQLLRNHPNLLAGYLGRGSAKAMLGDLQKAL 287

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           +DF  A++ +   G+A+KRRGQ + ALG++  A++D +KA+E  P   D   +RG     
Sbjct: 288 TDFNLAVKKDNKCGDAYKRRGQVKLALGQTQSALEDFNKAIELTPEEGDCYRQRGSAYHA 347

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
              F+ A ED+   +KL   + +    L L  + +G   ++   + +AI    +++E + 
Sbjct: 348 LGIFDKAAEDIKKSIKLIPGDATLLNELALCYNGMGLVDESINTYTRAINTKEDYVEPYI 407

Query: 556 HLTQFYQ 562
           HL Q Y+
Sbjct: 408 HLGQLYR 414



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 63/140 (45%)

Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
           + Y   G A + +G+ +KA      A++ D    +A+    Q    L  ++ ALE   + 
Sbjct: 268 AGYLGRGSAKAMLGDLQKALTDFNLAVKKDNKCGDAYKRRGQVKLALGQTQSALEDFNKA 327

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
           + +       Y  RG   H LG   KA +D+   + + P +   L   A CY+ +G   E
Sbjct: 328 IELTPEEGDCYRQRGSAYHALGIFDKAAEDIKKSIKLIPGDATLLNELALCYNGMGLVDE 387

Query: 638 AIKDYDAALDLELDSMEKFV 657
           +I  Y  A++ + D +E ++
Sbjct: 388 SINTYTRAINTKEDYVEPYI 407


>gi|118395715|ref|XP_001030204.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89284498|gb|EAR82541.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1108

 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 141/283 (49%), Gaps = 6/283 (2%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI ++   L+  P + +A+  RG A    ++ + AI D+T+A++       A+  RG   
Sbjct: 583 AIELYTISLQFYPNHFKAIFNRGFALDKLKQYDLAIKDYTKALEIENGNCYAYYNRGITY 642

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G+  +AI+D + A+   P  AD  H RG    K   +N A++D + C++ +  +  +
Sbjct: 643 DRKGQYDQAIKDFTSAIALNPKKADFYHNRGFAWKKKGCYNEAIQDFTFCIEFEPNHFKS 702

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +   G     I + ++AE+  LKA+ L    +    HL   Y+     ++AL    Q + 
Sbjct: 703 FYNRGSCFEKIQDLEQAEKDFLKALSLQPKNVSCLNHLGSLYEKCGKLDEALSYYNQSIE 762

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
            D + + +Y+ RGL+   LG ++KA++D +  + ++P+N   ++ R  C  ++ +  E+I
Sbjct: 763 FDPKQATSYNGRGLVHDKLGDYEKAMQDFTQAIQLEPTNPIYIHNRGCCLRSVDKLVESI 822

Query: 640 KDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCW 682
           KD++ A  L+LD     +L  L    +++  Y  +     FC+
Sbjct: 823 KDFEQA--LKLDPTNPIILSNLGLVYRKMERYDEAI----FCY 859



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 34/303 (11%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            DF  +RG A   +G Y  AI  F   ++ +P + ++   RG+     ++LE A  DF +
Sbjct: 666 ADFYHNRGFAWKKKGCYNEAIQDFTFCIEFEPNHFKSFYNRGSCFEKIQDLEQAEKDFLK 725

Query: 441 A----------------------------------IQSNPSAGEAWKRRGQARAALGESV 466
           A                                  I+ +P    ++  RG     LG+  
Sbjct: 726 ALSLQPKNVSCLNHLGSLYEKCGKLDEALSYYNQSIEFDPKQATSYNGRGLVHDKLGDYE 785

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           +A+QD ++A++ EP +   +H RG           +++D    +KLD  N    + LGL 
Sbjct: 786 KAMQDFTQAIQLEPTNPIYIHNRGCCLRSVDKLVESIKDFEQALKLDPTNPIILSNLGLV 845

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
              +  Y +A   + K ++     +    +    +  L   ++A+    QVL +      
Sbjct: 846 YRKMERYDEAIFCYNKELEFGGINIRTLNNRGYSFAKLGRYKEAINDYNQVLQVQGSNQH 905

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           A H RG+    LGQ + AI D S+ +  +PSN    + R  CY  +G+   AI+DY  AL
Sbjct: 906 ALHNRGICYERLGQFQNAINDFSAVIKSNPSNANAYFNRGCCYDNLGKMELAIQDYSKAL 965

Query: 647 DLE 649
           +++
Sbjct: 966 EID 968



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 84/197 (42%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+     G Y  A+  F Q ++ +P  P  +  RG       +L  +I DF +A++ +P
Sbjct: 774 RGLVHDKLGDYEKAMQDFTQAIQLEPTNPIYIHNRGCCLRSVDKLVESIKDFEQALKLDP 833

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +        G     +    EAI   +K LEF   +   L+ RG    K   +  A+ D 
Sbjct: 834 TNPIILSNLGLVYRKMERYDEAIFCYNKELEFGGINIRTLNNRGYSFAKLGRYKEAINDY 893

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +++   N+ A    G+    +G+++ A       I+ + +   A+ +    Y +L  
Sbjct: 894 NQVLQVQGSNQHALHNRGICYERLGQFQNAINDFSAVIKSNPSNANAYFNRGCCYDNLGK 953

Query: 567 SEKALECLQQVLYIDKR 583
            E A++   + L ID +
Sbjct: 954 MELAIQDYSKALEIDTK 970



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 36/63 (57%)

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+LRG          +AI D +  L +DP+++   Y +A+C +  G++  AI+ Y  AL
Sbjct: 168 AYYLRGCAYEKQKLIDQAISDFTQVLELDPNHVNAAYAKAACLNLKGDFHTAIETYKQAL 227

Query: 647 DLE 649
           +++
Sbjct: 228 EID 230



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 46  LCSLRNWSKAIRILDSLL-AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
              L  + +AI   + +L  Q      + NR  CY +L   ++ I D    ++ +P+   
Sbjct: 880 FAKLGRYKEAINDYNQVLQVQGSNQHALHNRGICYERLGQFQNAINDFSAVIKSNPSNAN 939

Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
           AY  +GC +  LG+ E A+  + K  E
Sbjct: 940 AYFNRGCCYDNLGKMELAIQDYSKALE 966


>gi|441498582|ref|ZP_20980777.1| TPR repeat protein [Fulvivirga imtechensis AK7]
 gi|441437688|gb|ELR71037.1| TPR repeat protein [Fulvivirga imtechensis AK7]
          Length = 370

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 156/315 (49%), Gaps = 14/315 (4%)

Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMY 414
           LK   N+  +     + ++ +SK    +    RG A+   G +  AI  ++  L+ D  Y
Sbjct: 29  LKSIENDQYKEAIELLNKVVESKPKDKEVYNKRGFARNQLGNFYGAIGDYNIALEIDSTY 88

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
            +AL+ RG A+    +   A+ D+ +AI+  P + +A+  R  A+  L +   A  D SK
Sbjct: 89  ADALLNRGEAKFNLGDDYGALEDYDKAIKYEPKSAQAYTSRAFAKYNLEDLEGAYFDFSK 148

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A+E +PN AD    RG++  + +++ +A++D +  + LD  +   Y Y  +A  +I + +
Sbjct: 149 AIEMDPNDADKYFNRGVIKAELEEYISAIDDYNKALSLDDSDPDIYNYRAVAKFNIDQVE 208

Query: 535 KAEEAHLKAIQLD-------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
           +A + + KAI++D        N   A   L  +   LA+ +K++E   +           
Sbjct: 209 EAMKDYNKAIEMDTTDPIKYENRALAKSTLEDYEGALADYDKSIELFDED-------PDT 261

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y+LRG++ + L  H+ AI+D S  + +DP N      RA    AI +Y+ AI+DY  +++
Sbjct: 262 YNLRGVVKYNLENHEGAIEDYSKAIELDPYNPVYYDNRALSKVAIQDYKGAIRDYSYSIE 321

Query: 648 LELDSMEKFVLQCLA 662
           L     E F  + LA
Sbjct: 322 LFPTDPETFHQRGLA 336



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 14/194 (7%)

Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
           + Y+K+   D+   D    R+   F  D ++E   +  +  +   T   K ++       
Sbjct: 178 DDYNKALSLDDSDPDIYNYRAVAKFNIDQVEEAMKDYNKAIEMDTTDPIKYEN------- 230

Query: 386 SRGIAQVNEGKYASAISIFD---QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
            R +A+     Y  A++ +D   ++  EDP   +    RG  +      E AI D+++AI
Sbjct: 231 -RALAKSTLEDYEGALADYDKSIELFDEDP---DTYNLRGVVKYNLENHEGAIEDYSKAI 286

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + +P     +  R  ++ A+ +   AI+D S ++E  P   +  H+RG+      D    
Sbjct: 287 ELDPYNPVYYDNRALSKVAIQDYKGAIRDYSYSIELFPTDPETFHQRGLAKISKGDKYDG 346

Query: 503 VEDLSACVKLDKEN 516
             DL+  V+L  E+
Sbjct: 347 CLDLNTAVELGSED 360


>gi|304315338|ref|YP_003850485.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
 gi|302588797|gb|ADL59172.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 386

 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 153/304 (50%), Gaps = 6/304 (1%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + LS G + + +GKY  A+  F + LK  P  PE L          +  E A+  + + +
Sbjct: 18  WHLSGGRSSLKQGKYKEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALECYEKIL 77

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           ++NP   EAW  +G     L    EA++   +AL+ +P      + +G +         A
Sbjct: 78  KNNPKLAEAWNNKGVVLKELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKA 137

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +E     ++++++N  A+   G  L S+G+Y++A E + KA+Q++  F+EAW +     +
Sbjct: 138 IECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALILE 197

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +L   ++ALEC ++ L ID      ++ +G LL  +G+ +KAI+     L I+  N +  
Sbjct: 198 ELKRYDEALECYERALQIDPEDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAW 257

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKI 676
             +      +  Y EA++ Y+ AL++ L++ E +     +L+ L  Y++ +  +  A +I
Sbjct: 258 NNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALEI 317

Query: 677 NSEF 680
           N EF
Sbjct: 318 NPEF 321


>gi|428310633|ref|YP_007121610.1| hypothetical protein Mic7113_2401 [Microcoleus sp. PCC 7113]
 gi|428252245|gb|AFZ18204.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
          Length = 595

 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 134/263 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+ +   +  AI  FDQ+++  P   EA   RG      +   AAI D  + I+ N
Sbjct: 277 NRGLARYDLQDWQGAIEDFDQLIRLQPNDAEAYYKRGITYFELKNYRAAIEDLNQVIRLN 336

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +A+  RG AR+  G+  EA++D +KALE EP +A   + RG   F   D+  AVED
Sbjct: 337 PNEAKAYVSRGLARSEAGDQREAMEDYTKALELEPKNAKAYYSRGRARFLLGDYGGAVED 396

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+ +N +AYT    A  ++  ++ A     +AI L+ N  E + +    Y +L 
Sbjct: 397 YTQAIELEPKNAAAYTNRCSARLNLSAHQDAIVDCTQAIALNPNKDEPYNNRCIAYFNLK 456

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + AL+   Q +  +     AY  RG +   LG  + A++D +  + ++ +N      R
Sbjct: 457 DYQNALQDCSQAIRFNPNNDTAYSNRGDIRRNLGDKQGALEDYTQAIRLNSNNSIAYSNR 516

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
           A     +G+ + AI DY  A+ L
Sbjct: 517 ADARRDLGDQQGAIADYTDAIRL 539



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 134/256 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+ ++ +     AI  FDQ ++ +P  P A   RG A     + +AAI D+++ I+  
Sbjct: 209 NQGVEKLKKEDRRGAIQDFDQAIRLNPNNPLAYGNRGNAHYDLGDYKAAIEDYSQMIRLE 268

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG AR  L +   AI+D  + +  +PN A+  ++RGI  F+ K++ AA+ED
Sbjct: 269 PNKAGAYYNRGLARYDLQDWQGAIEDFDQLIRLQPNDAEAYYKRGITYFELKNYRAAIED 328

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L+  ++L+     AY   GLA S  G+ ++A E + KA++L+    +A+    +    L 
Sbjct: 329 LNQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDYTKALELEPKNAKAYYSRGRARFLLG 388

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +   A+E   Q + ++ + + AY  R      L  H+ AI D +  + ++P+  E    R
Sbjct: 389 DYGGAVEDYTQAIELEPKNAAAYTNRCSARLNLSAHQDAIVDCTQAIALNPNKDEPYNNR 448

Query: 626 ASCYHAIGEYREAIKD 641
              Y  + +Y+ A++D
Sbjct: 449 CIAYFNLKDYQNALQD 464



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 121/244 (49%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G  +  + +   AI DF +AI+ NP+   A+  RG A   LG+   AI+D S+ +  EP
Sbjct: 210 QGVEKLKKEDRRGAIQDFDQAIRLNPNNPLAYGNRGNAHYDLGDYKAAIEDYSQMIRLEP 269

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A   + RG+  +  +D+  A+ED    ++L   +  AY   G+    +  Y+ A E  
Sbjct: 270 NKAGAYYNRGLARYDLQDWQGAIEDFDQLIRLQPNDAEAYYKRGITYFELKNYRAAIEDL 329

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            + I+L+ N  +A+        +  +  +A+E   + L ++ + +KAY+ RG     LG 
Sbjct: 330 NQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDYTKALELEPKNAKAYYSRGRARFLLGD 389

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
           +  A++D +  + ++P N      R S    +  +++AI D   A+ L  +  E +  +C
Sbjct: 390 YGGAVEDYTQAIELEPKNAAAYTNRCSARLNLSAHQDAIVDCTQAIALNPNKDEPYNNRC 449

Query: 661 LAFY 664
           +A++
Sbjct: 450 IAYF 453



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 128/266 (48%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGI       Y +AI   +Q+++ +P   +A + RG AR+   +   A+ D+T+A++  P
Sbjct: 312 RGITYFELKNYRAAIEDLNQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDYTKALELEP 371

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG+AR  LG+   A++D ++A+E EP +A     R            A+ D 
Sbjct: 372 KNAKAYYSRGRARFLLGDYGGAVEDYTQAIELEPKNAAAYTNRCSARLNLSAHQDAIVDC 431

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + L+      Y    +A  ++ +Y+ A +   +AI+ + N   A+ +     ++L +
Sbjct: 432 TQAIALNPNKDEPYNNRCIAYFNLKDYQNALQDCSQAIRFNPNNDTAYSNRGDIRRNLGD 491

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + ALE   Q + ++   S AY  R      LG  + AI D +  + ++P N    Y R 
Sbjct: 492 KQGALEDYTQAIRLNSNNSIAYSNRADARRDLGDQQGAIADYTDAIRLNPKNAFAYYGRG 551

Query: 627 SCYHAIGEYREAIKDYDAALDLELDS 652
             + A+G   EAI D+  A  L L++
Sbjct: 552 LTHLAVGNKSEAITDFQEASRLFLNN 577



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 113/224 (50%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +SRG+A+   G    A+  + + L+ +P   +A   RG AR    +   A+ D+T+AI+ 
Sbjct: 344 VSRGLARSEAGDQREAMEDYTKALELEPKNAKAYYSRGRARFLLGDYGGAVEDYTQAIEL 403

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A+  R  AR  L    +AI D ++A+   PN  +  + R I  F  KD+  A++
Sbjct: 404 EPKNAAAYTNRCSARLNLSAHQDAIVDCTQAIALNPNKDEPYNNRCIAYFNLKDYQNALQ 463

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D S  ++ +  N +AY+  G    ++G+ + A E + +AI+L+ N   A+ +     +DL
Sbjct: 464 DCSQAIRFNPNNDTAYSNRGDIRRNLGDKQGALEDYTQAIRLNSNNSIAYSNRADARRDL 523

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            + + A+      + ++ + + AY+ RGL    +G   +AI D 
Sbjct: 524 GDQQGAIADYTDAIRLNPKNAFAYYGRGLTHLAVGNKSEAITDF 567



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 60/127 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R IA  N   Y +A+    Q ++ +P    A   RG  R    + + A+ D+T+AI+ N
Sbjct: 447 NRCIAYFNLKDYQNALQDCSQAIRFNPNNDTAYSNRGDIRRNLGDKQGALEDYTQAIRLN 506

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +   A+  R  AR  LG+   AI D + A+   P +A   + RG+ +    + + A+ D
Sbjct: 507 SNNSIAYSNRADARRDLGDQQGAIADYTDAIRLNPKNAFAYYGRGLTHLAVGNKSEAITD 566

Query: 506 LSACVKL 512
                +L
Sbjct: 567 FQEASRL 573



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 3/125 (2%)

Query: 8   DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL-AQS 66
           ++ Y L      I +  +++R++   A A   R  LA+   L++W  AI   D L+  Q 
Sbjct: 246 NAHYDLGDYKAAIEDYSQMIRLEPNKAGAYYNR-GLARY-DLQDWQGAIEDFDQLIRLQP 303

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
            + +    R   Y +L+ ++  I D ++ ++L+P   +AY+ +G A S  G + EA+  +
Sbjct: 304 NDAEAYYKRGITYFELKNYRAAIEDLNQVIRLNPNEAKAYVSRGLARSEAGDQREAMEDY 363

Query: 127 EKGYE 131
            K  E
Sbjct: 364 TKALE 368



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 47/100 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  + N G    A+  + Q ++ +     A   R  AR    + + AI+D+T+AI+ N
Sbjct: 481 NRGDIRRNLGDKQGALEDYTQAIRLNSNNSIAYSNRADARRDLGDQQGAIADYTDAIRLN 540

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           P    A+  RG    A+G   EAI D  +A     N+  I
Sbjct: 541 PKNAFAYYGRGLTHLAVGNKSEAITDFQEASRLFLNNGRI 580



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/96 (22%), Positives = 50/96 (52%)

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A++   Q + ++     AY  RG   + LG +K AI+D S  + ++P+     Y R    
Sbjct: 223 AIQDFDQAIRLNPNNPLAYGNRGNAHYDLGDYKAAIEDYSQMIRLEPNKAGAYYNRGLAR 282

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           + + +++ AI+D+D  + L+ +  E +  + + +++
Sbjct: 283 YDLQDWQGAIEDFDQLIRLQPNDAEAYYKRGITYFE 318


>gi|145516292|ref|XP_001444040.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411440|emb|CAK76643.1| unnamed protein product [Paramecium tetraurelia]
          Length = 681

 Score =  118 bits (296), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 139/274 (50%), Gaps = 1/274 (0%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           +K IS D+  S+G     +  +  AI  +   L  +P + +++  RG A    R    AI
Sbjct: 265 NKKIS-DWFHSQGFEARKKEDFIKAIEFYTMALMFNPNHFKSIFNRGFAFDKLRMYNDAI 323

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           SD+T+AI+ +     A+  RG +    G+   AI+D +K++E +P+ AD  H +G    K
Sbjct: 324 SDYTKAIELDSKNAYAYYNRGISYDKKGDYNLAIKDFAKSIELDPSKADFYHNKGFAMKK 383

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
                 A+ + + C++LDK +  AY         +G++ KA++ +L A  +  N      
Sbjct: 384 KNLIKEAILEFNECIRLDKNHFKAYYNRANCYEKLGDFDKAQQDYLIANNVVPNNPNTLT 443

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           H+          E+AL+     L ID+ ++ AY+ RGL+   +G+ +KA +D +  + I+
Sbjct: 444 HIGILMDRQQKLEEALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKAIEIE 503

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           P N   ++ R  C  ++ ++ EA++D+  AL L+
Sbjct: 504 PQNPVYIHNRGCCKRSMNKFEEALEDFKKALSLD 537



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 34/224 (15%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q++LE A+  F  +++ + +   A+  RG     +GE  +A QD +KA+E EP +   +H
Sbjct: 452 QQKLEEALKYFNSSLKIDQNYAPAYNGRGLVFDKIGEFEKACQDFNKAIEIEPQNPVYIH 511

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG        F  A+ED    + LD +N   Y+ +GL L  + ++              
Sbjct: 512 NRGCCKRSMNKFEEALEDFKKALSLDSKNPIIYSNMGLVLRKMEDF-------------- 557

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
                               E A  C  Q L   +  ++  + RG  L  LGQ  +AI D
Sbjct: 558 --------------------ETAAYCYSQELIYSQENTRTLNNRGYCLAKLGQFDEAIAD 597

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            +  + +DP NI  +Y R  C   IGE+R+AI+D+   + L+ D
Sbjct: 598 YTKAIKLDPVNIHAIYNRGICNERIGEFRKAIEDFSQVIHLQND 641



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-S 444
           +RG      G++  AI+ + + +K DP+   A+  RG       E   AI DF++ I   
Sbjct: 580 NRGYCLAKLGQFDEAIADYTKAIKLDPVNIHAIYNRGICNERIGEFRKAIEDFSQVIHLQ 639

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           N     A+  RG     +GE   AI D SKALE +  ++ +
Sbjct: 640 NDQGANAYFNRGCCYDNIGEMDLAIADYSKALEIDNKTSKV 680



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           + A++   ++L  D      Y+LRG     LGQ   AI+D S  L +D +++   + RAS
Sbjct: 59  QTAIQDCNKLLETDGENVGGYYLRGCANEKLGQIDLAIEDFSKVLSLDENHVNAAFARAS 118

Query: 628 CYHAIGEYREAIKDYDAALD 647
           C +  G++  AI+DY  AL+
Sbjct: 119 CLNLKGDFAGAIEDYTRALE 138



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 76/351 (21%), Positives = 135/351 (38%), Gaps = 76/351 (21%)

Query: 385 LSRGIAQVNEGKYASAISIFDQI------LKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           L++  +Q    KY  +I+I + I      LK  P + +AL  R +A   + E + AI D 
Sbjct: 6   LTKLPSQQKVPKYRPSINIDNLIAICTGKLKNCPNHKKALYIRASAYIKKGEYQTAIQDC 65

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFK 497
            + ++++      +  RG A   LG+   AI+D SK L  + N  +    R   +N K  
Sbjct: 66  NKLLETDGENVGGYYLRGCANEKLGQIDLAIEDFSKVLSLDENHVNAAFARASCLNLK-G 124

Query: 498 DFNAAVEDLSACVKLD-----------------------KENKSAYTYLGLALSSIGEYK 534
           DF  A+ED +  ++ D                       K+     T      +   +Y+
Sbjct: 125 DFAGAIEDYTRALEKDNAKSLNLSNSINKRSLLRNSSMKKDEPYPKTDAFQFTTKKNKYQ 184

Query: 535 KAEEAHLKAIQLDRNFLE-------------AWGHLTQFYQDLANSEKALECLQQVLYID 581
           + EE  L   Q D  +L+             ++      Y  +  +E  ++   Q+  ID
Sbjct: 185 QPEEDDLMNPQNDEEYLQNDQSQIQNQPQQTSFMSQNPLYTSIDANELNIQRPSQI--ID 242

Query: 582 KRFSKA-----------------------YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           K  S+                        +H +G          KAI+  +  L  +P++
Sbjct: 243 KEISQPMQQQLISMIPENIKNDNKKISDWFHSQGFEARKKEDFIKAIEFYTMALMFNPNH 302

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
            + ++ R   +  +  Y +AI DY  A  +ELDS   +     A+Y + I+
Sbjct: 303 FKSIFNRGFAFDKLRMYNDAISDYTKA--IELDSKNAY-----AYYNRGIS 346


>gi|15678100|ref|NP_275215.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621106|gb|AAB84576.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 403

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 154/304 (50%), Gaps = 6/304 (1%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + LS G + + +GKY  A+  F + LK  P  PE L          +  E A+  + + +
Sbjct: 18  WHLSGGRSSLKQGKYKEALKEFRKALKASPNDPEILHYNAMTLLKLKRPEKALKCYEKIL 77

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           ++NP   EAW  +G     L    EA++   +AL+ +P      + +G +         A
Sbjct: 78  KNNPKLAEAWNNKGVVLKELKRYDEALECYERALQIDPQDDGTWNNKGALLDTIGKPEKA 137

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +E     ++++++N  A+   G  L S+G+Y++A E + KA+Q++  F+EAW +    ++
Sbjct: 138 IECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKALIFE 197

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +L   ++ALEC  + L ID +    ++ +G LL  +G+ +KAI+     L I+  N +  
Sbjct: 198 ELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAW 257

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKI 676
             +      +  Y EA++ Y+ AL++ L++ E +     +L+ L  Y++ +  +  A +I
Sbjct: 258 NNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALEI 317

Query: 677 NSEF 680
           N EF
Sbjct: 318 NPEF 321



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 114/222 (51%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  A+  +++ L+ +  + EA   +       +  + A+  +  A+Q +P     W  
Sbjct: 166 GKYEEALECYEKALQINAEFVEAWYNKALIFEELKRYDEALECYGRALQIDPQDDGTWNN 225

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G     +G+  +AI+   KALE    +A   + +G+V  + K ++ A+E     ++++ 
Sbjct: 226 KGALLDTIGKPEKAIECYEKALEINQKNAKAWNNKGVVLEELKRYDEALECYEKALEINL 285

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           EN   +   G+ L  +G+Y++A E   KA++++  F +AW       +DL   E+AL+C 
Sbjct: 286 ENDETWANKGVLLRKLGKYEEALECFEKALEINPEFADAWEWKGIILEDLKKPEEALKCY 345

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           ++ L ++ +    ++++G  L  LG+H+KA K     L IDP
Sbjct: 346 EKALKLNPQDKTLWYMQGKTLQKLGKHQKAKKSYKKALKIDP 387



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 123/255 (48%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GK   AI  +++ L+ +    +A   +G       + E A+  + +A+Q N    EAW  
Sbjct: 132 GKPEKAIECYEKALEINQKNAKAWYNKGNGLRSLGKYEEALECYEKALQINAEFVEAWYN 191

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      L    EA++   +AL+ +P      + +G +         A+E     +++++
Sbjct: 192 KALIFEELKRYDEALECYGRALQIDPQDDGTWNNKGALLDTIGKPEKAIECYEKALEINQ 251

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +N  A+   G+ L  +  Y +A E + KA++++    E W +     + L   E+ALEC 
Sbjct: 252 KNAKAWNNKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECF 311

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++ L I+  F+ A+  +G++L  L + ++A+K     L ++P +    Y++      +G+
Sbjct: 312 EKALEINPEFADAWEWKGIILEDLKKPEEALKCYEKALKLNPQDKTLWYMQGKTLQKLGK 371

Query: 635 YREAIKDYDAALDLE 649
           +++A K Y  AL ++
Sbjct: 372 HQKAKKSYKKALKID 386


>gi|390438504|ref|ZP_10226967.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           (modular protein) [Microcystis sp. T1-4]
 gi|389838086|emb|CCI31091.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           (modular protein) [Microcystis sp. T1-4]
          Length = 1080

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 162/369 (43%), Gaps = 16/369 (4%)

Query: 337 KSSDSTESRSKLSFKWDMLKETSNEAKRNKKF--CVTRISKSKSISVDFRLS---RGIAQ 391
           K +D TE     +F +    +  N+   N  F   +    ++  I  DF L+   RG A 
Sbjct: 139 KETDLTEVVQDAAFWF----QQGNQKYMNGDFLGAIASYDRALEIKPDFHLAWLIRGFAL 194

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
            N G++  AI+ +D+ L+  P   EA   RG A         AI+ +  A++  P    A
Sbjct: 195 DNLGRFEKAIASWDRALEIKPDLHEAWNNRGNALGNLGRFGQAIASYDRALEFKPDDHLA 254

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W  RG A   LG   +AI    +ALE +P+  +  + RG+          A+      ++
Sbjct: 255 WNNRGSALYYLGRFEQAIASYDRALEIKPDKHEAWYGRGVALGNLGRSEQAIASYDRALE 314

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           +  +   A+ Y G+AL+ +G +++A  +  +A+++  +F  AW +      +L   E+A+
Sbjct: 315 IKPDYHDAWNYRGIALADLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAI 374

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               + L I     +A++ RG  L  LG+ ++AI      L I P   E    R +    
Sbjct: 375 ASYDRALEIKPDLHQAWYGRGNALKNLGRFEEAIASYDHALEIKPDYHEAWNNRGNALAD 434

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +G + EAI  YD AL+ + D  E       A+  +  AL    ++      +D   +I P
Sbjct: 435 LGRFAEAIASYDRALEFKPDDHE-------AWNNRGFALGNLGRLEEAIASYDRALEIKP 487

Query: 692 LFKEYWCKR 700
            F E W  R
Sbjct: 488 DFHEAWGNR 496



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 130/289 (44%), Gaps = 24/289 (8%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA  + G++  AI+ FDQ L+  P +  A   RG        LE AI+ +  A++  P
Sbjct: 326 RGIALADLGRFEQAIASFDQALEIKPDFHLAWYNRGIELGNLGRLEEAIASYDRALEIKP 385

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG A   LG   EAI     ALE +P+  +  + RG        F  A+   
Sbjct: 386 DLHQAWYGRGNALKNLGRFEEAIASYDHALEIKPDYHEAWNNRGNALADLGRFAEAIASY 445

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++   ++  A+   G AL ++G  ++A  ++ +A+++  +F EAWG+       L+ 
Sbjct: 446 DRALEFKPDDHEAWNNRGFALGNLGRLEEAIASYDRALEIKPDFHEAWGNRGWAVCSLSK 505

Query: 567 SEKALECLQQVLY------IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           +  +   L+ ++Y      ++ R    + LR  L H L Q       +   LG       
Sbjct: 506 NRISTPSLEALIYRKPIVALNDREPHIFALREALPH-LIQGSPPWGQIYRYLG------- 557

Query: 621 CLYLRASCY--HAIGEYREAIKDYDAAL------DLELDSMEKFVLQCL 661
             YL+ S Y  +A   +REAI+ Y  AL      D   D +E  +LQ L
Sbjct: 558 QAYLKHSRYKENASPYWREAIRHYQTALPILSEKDFPEDHLE--ILQGL 604



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 104/225 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RG+A  N G+   AI+ +D+ L+  P Y +A   RG A A     E AI+ F +A++  
Sbjct: 291 GRGVALGNLGRSEQAIASYDRALEIKPDYHDAWNYRGIALADLGRFEQAIASFDQALEIK 350

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG     LG   EAI    +ALE +P+     + RG        F  A+  
Sbjct: 351 PDFHLAWYNRGIELGNLGRLEEAIASYDRALEIKPDLHQAWYGRGNALKNLGRFEEAIAS 410

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +   A+   G AL+ +G + +A  ++ +A++   +  EAW +      +L 
Sbjct: 411 YDHALEIKPDYHEAWNNRGNALADLGRFAEAIASYDRALEFKPDDHEAWNNRGFALGNLG 470

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             E+A+    + L I   F +A+  RG  +  L +++ +   L +
Sbjct: 471 RLEEAIASYDRALEIKPDFHEAWGNRGWAVCSLSKNRISTPSLEA 515



 Score = 47.0 bits (110), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 8/150 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  + G++A AI+ +D+ L+  P   EA   RG A      LE AI+ +  A++  
Sbjct: 427 NRGNALADLGRFAEAIASYDRALEFKPDDHEAWNNRGFALGNLGRLEEAIASYDRALEIK 486

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A  +L ++  +   L   +  +P  A  L++R    F  +      E 
Sbjct: 487 PDFHEAWGNRGWAVCSLSKNRISTPSLEALIYRKPIVA--LNDREPHIFALR------EA 538

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L   ++        Y YLG A      YK+
Sbjct: 539 LPHLIQGSPPWGQIYRYLGQAYLKHSRYKE 568


>gi|218441625|ref|YP_002379954.1| serine/threonine protein kinase [Cyanothece sp. PCC 7424]
 gi|218174353|gb|ACK73086.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
           PCC 7424]
          Length = 730

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 141/281 (50%), Gaps = 5/281 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+  ++  L  +P  P    G+G A    +  + A+  + EAIQ  P+  +AW  R
Sbjct: 376 RYQDALQAYEASLDTNPNNPPTWKGKGDALQALKRYQNALEAYDEAIQLQPNYWQAWMER 435

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
            +    LG++ EAI    K ++F PN        G +  K +D+  A+  L+  ++++ +
Sbjct: 436 AEVLEKLGKNSEAIYSYEKVIDFTPNEWQAWQNLGEIQVKLQDYATALVSLNKSLQINPD 495

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           ++ ++   G AL ++  Y++A +++ KA++++ +F +AW      Y +L    +A E  +
Sbjct: 496 DEWSWYQKGFALQNLKNYEEAIKSYEKAVKINPSFSQAWYQKGNSYMNLEKYSQAGESYR 555

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           Q +       +A++ +G+ L+ L ++++A+K    G  I P++ E  Y +A     +  Y
Sbjct: 556 QAVQFQPDLYQAWYSQGIALNRLNRYREALKAFEEGTQIQPNSFEAWYQKAWTLQTLNRY 615

Query: 636 REAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIALY 671
            EA++ Y+ A  L   + + +      L  L  YQ+ IA Y
Sbjct: 616 GEAVEAYNTATRLNPKNPQAWYNKGNSLYLLEDYQQAIAAY 656



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 3/213 (1%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +  ++KS  I+ D   S   +G A  N   Y  AI  +++ +K +P + +A   +G + 
Sbjct: 482 ALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEAIKSYEKAVKINPSFSQAWYQKGNSY 541

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
               +   A   + +A+Q  P   +AW  +G A   L    EA++   +  + +PNS + 
Sbjct: 542 MNLEKYSQAGESYRQAVQFQPDLYQAWYSQGIALNRLNRYREALKAFEEGTQIQPNSFEA 601

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            +++         +  AVE  +   +L+ +N  A+   G +L  + +Y++A  A+ + I 
Sbjct: 602 WYQKAWTLQTLNRYGEAVEAYNTATRLNPKNPQAWYNKGNSLYLLEDYQQAIAAYQQVIS 661

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
           LD++F  AW  L   +  L    +A++   Q L
Sbjct: 662 LDKDFYPAWKSLGNSFFKLKRYSEAIKAYDQTL 694



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 105/219 (47%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G  QV    YA+A+   ++ L+ +P    +   +G A    +  E AI  + +A++ NPS
Sbjct: 470 GEIQVKLQDYATALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEAIKSYEKAVKINPS 529

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +AW ++G +   L +  +A +   +A++F+P+     + +GI   +   +  A++   
Sbjct: 530 FSQAWYQKGNSYMNLEKYSQAGESYRQAVQFQPDLYQAWYSQGIALNRLNRYREALKAFE 589

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
              ++   +  A+      L ++  Y +A EA+  A +L+    +AW +       L + 
Sbjct: 590 EGTQIQPNSFEAWYQKAWTLQTLNRYGEAVEAYNTATRLNPKNPQAWYNKGNSLYLLEDY 649

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           ++A+   QQV+ +DK F  A+   G     L ++ +AIK
Sbjct: 650 QQAIAAYQQVISLDKDFYPAWKSLGNSFFKLKRYSEAIK 688



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 41/267 (15%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+  +  ++ +NP+    WK +G A  AL     A++   +A++ +PN      ER  V 
Sbjct: 380 ALQAYEASLDTNPNNPPTWKGKGDALQALKRYQNALEAYDEAIQLQPNYWQAWMERAEV- 438

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
                            KL K +++ Y+Y                   K I    N  +A
Sbjct: 439 ---------------LEKLGKNSEAIYSYE------------------KVIDFTPNEWQA 465

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           W +L +    L +   AL  L + L I+     +++ +G  L  L  +++AIK     + 
Sbjct: 466 WQNLGEIQVKLQDYATALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEAIKSYEKAVK 525

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTA 673
           I+PS  +  Y + + Y  + +Y +A + Y  A+  + D  +       A+Y + IAL   
Sbjct: 526 INPSFSQAWYQKGNSYMNLEKYSQAGESYRQAVQFQPDLYQ-------AWYSQGIALNRL 578

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKR 700
           ++       F+    I P   E W ++
Sbjct: 579 NRYREALKAFEEGTQIQPNSFEAWYQK 605



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 80/168 (47%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N+A  ++ +G   ++ + +  A++   A +  +  N   +   G AL ++  Y+ A EA+
Sbjct: 359 NNATKMYNKGNTLYQLQRYQDALQAYEASLDTNPNNPPTWKGKGDALQALKRYQNALEAY 418

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AIQL  N+ +AW    +  + L  + +A+   ++V+       +A+   G +   L  
Sbjct: 419 DEAIQLQPNYWQAWMERAEVLEKLGKNSEAIYSYEKVIDFTPNEWQAWQNLGEIQVKLQD 478

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           +  A+  L+  L I+P +    Y +      +  Y EAIK Y+ A+ +
Sbjct: 479 YATALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEAIKSYEKAVKI 526


>gi|430743555|ref|YP_007202684.1| hypothetical protein Sinac_2691 [Singulisphaera acidiphila DSM
           18658]
 gi|430015275|gb|AGA26989.1| TPR repeat-containing protein [Singulisphaera acidiphila DSM 18658]
          Length = 654

 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 132/264 (50%), Gaps = 2/264 (0%)

Query: 388 GIAQVNE--GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           G+ QV    G+   AI  + + ++ +P  P   +GR  A   +++ E A+ DF EAI+ N
Sbjct: 144 GLGQVAHRLGQDDVAIEQYGEAIRANPSDPSGFLGRAEALVSKKDFEQALPDFGEAIRLN 203

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A   LG   EA+ D   A+E + ++A+    RG +  +  +   A+ D
Sbjct: 204 PRQSRAYGFRGDALWQLGRLKEALADFDNAIELDADNAEAHSRRGSLLAQLGENERALPD 263

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L A ++L+    +AY   G  L  +G Y +A E   K+I +D     ++ +    Y  LA
Sbjct: 264 LDAVIRLNPRRAAAYKDRGGVLVRLGRYDQAIEDLNKSITIDPGRASSYQNRGAAYSGLA 323

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             EKA+  L + +++D     A    GL L  LGQ+++A+ +++    + P+N      R
Sbjct: 324 QYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALAEMNEATRLAPNNSLVFLNR 383

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
           A  Y  +G    A++DY+ AL L+
Sbjct: 384 AGTYARLGLLDRAVEDYNEALRLD 407



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 3/288 (1%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R++  +S +  FR   G A    G+   A++ FD  ++ D    EA   RG+  A   E 
Sbjct: 201 RLNPRQSRAYGFR---GDALWQLGRLKEALADFDNAIELDADNAEAHSRRGSLLAQLGEN 257

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E A+ D    I+ NP    A+K RG     LG   +AI+DL+K++  +P  A     RG 
Sbjct: 258 ERALPDLDAVIRLNPRRAAAYKDRGGVLVRLGRYDQAIEDLNKSITIDPGRASSYQNRGA 317

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                  +  AV DL+  + LD  N  A T LGLAL ++G+Y++A     +A +L  N  
Sbjct: 318 AYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALAEMNEATRLAPNNS 377

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
             + +    Y  L   ++A+E   + L +D +   A+   G     LG+  +AI      
Sbjct: 378 LVFLNRAGTYARLGLLDRAVEDYNEALRLDPKAILAHVGLGKAQDSLGRRVQAIHSYDMA 437

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
           L ++P+N      R +   A G+++ A++D+  A++L     E +VL+
Sbjct: 438 LQLNPTNARVYTSRGNARRAEGDWKGALEDFSKAIELNPKYAEAYVLR 485



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 8/285 (2%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           + K K   ++ R  RG+A +   + A A++ FD +++  P    + I RG AR    E E
Sbjct: 55  VLKRKPRDLEARTKRGVAYLRLNQPAQAMADFDAVIRITPWSYSSHIDRGIARVMLGEYE 114

Query: 433 AAISDFTEAI-------QSNP-SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
            A  DF +++       + +P S   A    GQ    LG+   AI+   +A+   P+   
Sbjct: 115 DARKDFDQSLGLLALSFKRDPTSLANAHCGLGQVAHRLGQDDVAIEQYGEAIRANPSDPS 174

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
               R       KDF  A+ D    ++L+     AY + G AL  +G  K+A      AI
Sbjct: 175 GFLGRAEALVSKKDFEQALPDFGEAIRLNPRQSRAYGFRGDALWQLGRLKEALADFDNAI 234

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           +LD +  EA          L  +E+AL  L  V+ ++ R + AY  RG +L  LG++ +A
Sbjct: 235 ELDADNAEAHSRRGSLLAQLGENERALPDLDAVIRLNPRRAAAYKDRGGVLVRLGRYDQA 294

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           I+DL+  + IDP        R + Y  + +Y +A+ D + A+ L+
Sbjct: 295 IEDLNKSITIDPGRASSYQNRGAAYSGLAQYEKAVGDLNEAIHLD 339



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 98/206 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG   V  G+Y  AI   ++ +  DP    +   RG A +   + E A+ D  EAI  +P
Sbjct: 281 RGGVLVRLGRYDQAIEDLNKSITIDPGRASSYQNRGAAYSGLAQYEKAVGDLNEAIHLDP 340

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   A    G A  ALG+   A+ ++++A    PN++ +   R     +    + AVED 
Sbjct: 341 TNPGARTNLGLALFALGQYERALAEMNEATRLAPNNSLVFLNRAGTYARLGLLDRAVEDY 400

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++LD +   A+  LG A  S+G   +A  ++  A+QL+      +       +   +
Sbjct: 401 NEALRLDPKAILAHVGLGKAQDSLGRRVQAIHSYDMALQLNPTNARVYTSRGNARRAEGD 460

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRG 592
            + ALE   + + ++ ++++AY LRG
Sbjct: 461 WKGALEDFSKAIELNPKYAEAYVLRG 486



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 69/144 (47%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R + G+A    G+Y  A++  ++  +  P      + R    A    L+ A+ D+ EA++
Sbjct: 346 RTNLGLALFALGQYERALAEMNEATRLAPNNSLVFLNRAGTYARLGLLDRAVEDYNEALR 405

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            +P A  A    G+A+ +LG  V+AI     AL+  P +A +   RG       D+  A+
Sbjct: 406 LDPKAILAHVGLGKAQDSLGRRVQAIHSYDMALQLNPTNARVYTSRGNARRAEGDWKGAL 465

Query: 504 EDLSACVKLDKENKSAYTYLGLAL 527
           ED S  ++L+ +   AY   G +L
Sbjct: 466 EDFSKAIELNPKYAEAYVLRGWSL 489



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/200 (20%), Positives = 82/200 (41%), Gaps = 8/200 (4%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G+   A+    + L+ +P   +   +RG+   +      A+ D  A +++   + S++  
Sbjct: 43  GDYRSALPQFDEVLKRKPRDLEARTKRGVAYLRLNQPAQAMADFDAVIRITPWSYSSHID 102

Query: 523 LGLALSSIGEYKKA-----EEAHLKAIQLDRN---FLEAWGHLTQFYQDLANSEKALECL 574
            G+A   +GEY+ A     +   L A+   R+      A   L Q    L   + A+E  
Sbjct: 103 RGIARVMLGEYEDARKDFDQSLGLLALSFKRDPTSLANAHCGLGQVAHRLGQDDVAIEQY 162

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + +  +      +  R   L      ++A+ D    + ++P        R      +G 
Sbjct: 163 GEAIRANPSDPSGFLGRAEALVSKKDFEQALPDFGEAIRLNPRQSRAYGFRGDALWQLGR 222

Query: 635 YREAIKDYDAALDLELDSME 654
            +EA+ D+D A++L+ D+ E
Sbjct: 223 LKEALADFDNAIELDADNAE 242



 Score = 43.9 bits (102), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 13/119 (10%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIR------ILDSLLAQ 65
           +L +  + + ++D ++R++   A+A   R  +  L  L  + +AI        +D   A 
Sbjct: 253 QLGENERALPDLDAVIRLNPRRAAAYKDRGGV--LVRLGRYDQAIEDLNKSITIDPGRAS 310

Query: 66  SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
           SY+     NR   YS L  ++  + D ++A+ LDPT   A    G A  ALG+ E AL+
Sbjct: 311 SYQ-----NRGAAYSGLAQYEKAVGDLNEAIHLDPTNPGARTNLGLALFALGQYERALA 364



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 64/117 (54%), Gaps = 5/117 (4%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILD--SLLAQSYEIQ 70
           L +  K + +++E + +D     A T  + LA L +L  + +A+  ++  + LA +  + 
Sbjct: 322 LAQYEKAVGDLNEAIHLDPTNPGART-NLGLA-LFALGQYERALAEMNEATRLAPNNSLV 379

Query: 71  DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
              NRA  Y++L L    + D ++AL+LDP  + A++  G A  +LGR+ +A+  ++
Sbjct: 380 -FLNRAGTYARLGLLDRAVEDYNEALRLDPKAILAHVGLGKAQDSLGRRVQAIHSYD 435


>gi|428319183|ref|YP_007117065.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428242863|gb|AFZ08649.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 565

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 8/285 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI   N G++   I+ +++ L+  P Y +A   RG A      LE AI+ + +A++  
Sbjct: 105 NRGIGLGNLGRWEEGIASYNKTLEIKPDYHKAWYNRGIALHNLGLLEEAIASYDKALEFK 164

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    K LEF+P+  +  + RGI       +  A+  
Sbjct: 165 PDYHEAWNNRGNALGNLGRWEEAIASYEKVLEFKPDYHEAWNNRGITLGNLGRWEEAIAS 224

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++   +   A+   G AL ++G  ++A  +  KA++   ++ EAW +      +L 
Sbjct: 225 FDKALEFKADYHEAWNNRGNALGNLGRLEEAIASFDKALEFKADYHEAWNNRGNALGNLG 284

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L     + +A++ RG+ L  LG+ ++A+      L I P + E  Y R
Sbjct: 285 RLEEAIASFDKALEFKADYHQAWNNRGITLGKLGRLEEALASYDKALEIKPDD-EAWYNR 343

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
                 +G + EA+  +D AL+++ D  E       A+Y + IAL
Sbjct: 344 GIALGKLGRWEEALASFDKALEIKPDKDE-------AWYNRGIAL 381



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 1/262 (0%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G +    + FD+ L+  P  P+A   RG A       E AI+ + +A++  P   EAW  
Sbjct: 13  GLFEKGRAFFDETLEMKPE-PQACYDRGVALGNSGRWEEAIASYDKALEFKPDYHEAWNN 71

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A   LG   EAI    KALEF+P+     + RGI       +   +   +  +++  
Sbjct: 72  RGNALGNLGRWEEAIASFDKALEFKPDDDVAWYNRGIGLGNLGRWEEGIASYNKTLEIKP 131

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+   G+AL ++G  ++A  ++ KA++   ++ EAW +      +L   E+A+   
Sbjct: 132 DYHKAWYNRGIALHNLGLLEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIASY 191

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++VL     + +A++ RG+ L  LG+ ++AI      L       E    R +    +G 
Sbjct: 192 EKVLEFKPDYHEAWNNRGITLGNLGRWEEAIASFDKALEFKADYHEAWNNRGNALGNLGR 251

Query: 635 YREAIKDYDAALDLELDSMEKF 656
             EAI  +D AL+ + D  E +
Sbjct: 252 LEEAIASFDKALEFKADYHEAW 273



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 119/265 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  N G++  AI+ +D+ L+  P Y EA   RG A       E AI+ F +A++  P
Sbjct: 38  RGVALGNSGRWEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIASFDKALEFKP 97

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  RG     LG   E I   +K LE +P+     + RGI          A+   
Sbjct: 98  DDDVAWYNRGIGLGNLGRWEEGIASYNKTLEIKPDYHKAWYNRGIALHNLGLLEEAIASY 157

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++   +   A+   G AL ++G +++A  ++ K ++   ++ EAW +      +L  
Sbjct: 158 DKALEFKPDYHEAWNNRGNALGNLGRWEEAIASYEKVLEFKPDYHEAWNNRGITLGNLGR 217

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+    + L     + +A++ RG  L  LG+ ++AI      L       E    R 
Sbjct: 218 WEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEAIASFDKALEFKADYHEAWNNRG 277

Query: 627 SCYHAIGEYREAIKDYDAALDLELD 651
           +    +G   EAI  +D AL+ + D
Sbjct: 278 NALGNLGRLEEAIASFDKALEFKAD 302



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 8/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G++  AI+ FD+ L+  P    A   RG         E  I+ + + ++  
Sbjct: 71  NRGNALGNLGRWEEAIASFDKALEFKPDDDVAWYNRGIGLGNLGRWEEGIASYNKTLEIK 130

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   LG   EAI    KALEF+P+  +  + RG        +  A+  
Sbjct: 131 PDYHKAWYNRGIALHNLGLLEEAIASYDKALEFKPDYHEAWNNRGNALGNLGRWEEAIAS 190

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++   +   A+   G+ L ++G +++A  +  KA++   ++ EAW +      +L 
Sbjct: 191 YEKVLEFKPDYHEAWNNRGITLGNLGRWEEAIASFDKALEFKADYHEAWNNRGNALGNLG 250

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L     + +A++ RG  L  LG+ ++AI      L       +    R
Sbjct: 251 RLEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEAIASFDKALEFKADYHQAWNNR 310

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                 +G   EA+  YD AL+++ D          A+Y + IAL    +       FD 
Sbjct: 311 GITLGKLGRLEEALASYDKALEIKPDDE--------AWYNRGIALGKLGRWEEALASFDK 362

Query: 686 DGDIDPLFKEYWCKR 700
             +I P   E W  R
Sbjct: 363 ALEIKPDKDEAWYNR 377



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 132/305 (43%), Gaps = 36/305 (11%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI   N G++  AI+ FD+ L+    Y EA   RG A      LE AI+ F +A++  
Sbjct: 207 NRGITLGNLGRWEEAIASFDKALEFKADYHEAWNNRGNALGNLGRLEEAIASFDKALEFK 266

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EAW  RG A   LG   EAI    KALEF+ +     + RGI   K      A+  
Sbjct: 267 ADYHEAWNNRGNALGNLGRLEEAIASFDKALEFKADYHQAWNNRGITLGKLGRLEEALAS 326

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  ++++ Y   G+AL  +G +++A  +  KA+++  +  EAW +      DL 
Sbjct: 327 YDKALEIKPDDEAWYN-RGIALGKLGRWEEALASFDKALEIKPDKDEAWYNRGIALDDLG 385

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L I      A++ RG+ L  LG+ ++AI      L I P + E  Y R
Sbjct: 386 RWEEAIASYDKALEIIPD-DAAWNNRGIALGNLGRLEEAIASYDKALEIKPDSYESWYNR 444

Query: 626 ASCY----------------------------------HAIGEYREAIKDYDAALDLELD 651
            S                                      +G + EAI  Y+ AL++  D
Sbjct: 445 GSAMINLGRLEEAIASYDKALEIKPDDDAAWYNRGYSLRNLGRWEEAIASYNKALEIIPD 504

Query: 652 SMEKF 656
             E F
Sbjct: 505 DDEAF 509



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 130/266 (48%), Gaps = 2/266 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G+   AI+ FD+ L+    Y +A   RG        LE A++ + +A++  
Sbjct: 275 NRGNALGNLGRLEEAIASFDKALEFKADYHQAWNNRGITLGKLGRLEEALASYDKALEIK 334

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EA+    KALE +P+  +  + RGI       +  A+  
Sbjct: 335 PD-DEAWYNRGIALGKLGRWEEALASFDKALEIKPDKDEAWYNRGIALDDLGRWEEAIAS 393

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  ++ +A+   G+AL ++G  ++A  ++ KA+++  +  E+W +      +L 
Sbjct: 394 YDKALEIIPDD-AAWNNRGIALGNLGRLEEAIASYDKALEIKPDSYESWYNRGSAMINLG 452

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L I      A++ RG  L  LG+ ++AI   +  L I P + E  Y +
Sbjct: 453 RLEEAIASYDKALEIKPDDDAAWYNRGYSLRNLGRWEEAIASYNKALEIIPDDDEAFYNK 512

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
           A CY    +  +AI +   A++L  D
Sbjct: 513 ACCYALQSQSDQAIHNLQQAINLNPD 538


>gi|440681896|ref|YP_007156691.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428679015|gb|AFZ57781.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 371

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 125/241 (51%), Gaps = 2/241 (0%)

Query: 421 RGTARAFQR-ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           RG AR FQR + +AAI D  +A+   P    A+  RG     LG+  EAI D ++A++  
Sbjct: 84  RGLAR-FQRGDNQAAIVDIKQALDYYPDFVAAYSNRGNIFYILGQYTEAIADYNQAIQLN 142

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           PN +   H RG   +  KD+  A+ D +  + ++ +   AY   GL +S + +Y+ A   
Sbjct: 143 PNLSAAYHNRGNSRYALKDYQGAIADYNQALAINPQFGEAYYNRGLIMSHLQDYQSAIAD 202

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
             +AIQL+    +A+      Y +L + E A++   Q L ++      Y LR   LH LG
Sbjct: 203 FNQAIQLNPGDDQAYHQRGLVYSNLEDYENAIQDYNQALQVNPTLPIVYGLRANALHHLG 262

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
            ++ AI D +  L ++P+ +E    RA+ +  +G Y+ AI+DY+ AL L+ +    + L+
Sbjct: 263 DYQSAIADSTRLLQLNPTLVEGYCDRANFHRLLGNYQGAIEDYNRALQLQPNYATAYFLR 322

Query: 660 C 660
            
Sbjct: 323 A 323



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 142/286 (49%), Gaps = 9/286 (3%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           ++V+  ++ G+ +   G Y  AI+ F+Q ++ +P        RG A     E + AI+D+
Sbjct: 1   MNVEELITEGVKKNLSGDYRGAITFFNQAIQLNPHLEIVYHYRGHAYLGLEEFDLAIADY 60

Query: 439 TEAIQS-------NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
            +A  +       N    +A+  RG AR   G++  AI D+ +AL++ P+       RG 
Sbjct: 61  QQARHNSTGLENLNFDIAKAYHNRGLARFQRGDNQAAIVDIKQALDYYPDFVAAYSNRGN 120

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           + +    +  A+ D +  ++L+    +AY   G +  ++ +Y+ A   + +A+ ++  F 
Sbjct: 121 IFYILGQYTEAIADYNQAIQLNPNLSAAYHNRGNSRYALKDYQGAIADYNQALAINPQFG 180

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           EA+ +       L + + A+    Q + ++    +AYH RGL+   L  ++ AI+D +  
Sbjct: 181 EAYYNRGLIMSHLQDYQSAIADFNQAIQLNPGDDQAYHQRGLVYSNLEDYENAIQDYNQA 240

Query: 612 LGIDPSNIECLY-LRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           L ++P+ +  +Y LRA+  H +G+Y+ AI D    L L    +E +
Sbjct: 241 LQVNPT-LPIVYGLRANALHHLGDYQSAIADSTRLLQLNPTLVEGY 285


>gi|354567939|ref|ZP_08987106.1| serine/threonine protein kinase [Fischerella sp. JSC-11]
 gi|353541613|gb|EHC11080.1| serine/threonine protein kinase [Fischerella sp. JSC-11]
          Length = 759

 Score =  117 bits (294), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 162/358 (45%), Gaps = 22/358 (6%)

Query: 358 TSNEAKRN--KKFCVTRISKSKSISVDFRLSRGIAQVNEG-------------KYASAIS 402
           T+N+ K+N  KK     I    +I     +   I  VN               +Y  A+S
Sbjct: 333 TNNKRKKNITKKILAGTIILGLAIGASLYIINSINSVNATELYKKANTFYELQRYQDALS 392

Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
            F++ +K  P Y EA  G+G+  +  +E +AA++ +  AIQ  P   EAW  RG     L
Sbjct: 393 AFEKAVKIRPDYAEAWNGQGSTLSKLKEYKAALTAYDRAIQIQPDYLEAWIGRGFVLKNL 452

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
               EAI    KAL+ + NS  +   +G V    K ++ A+      + L K++ +A+  
Sbjct: 453 QRYQEAIASFDKALQLDTNSPQLWTTKGEVLSSLKRYDEAISAYEQAINLKKDDYTAWYN 512

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
             L L ++  Y++A  A+ KA+++  ++ EAW +      +L   + A     + + I+ 
Sbjct: 513 KALTLQNLKRYEEAVRAYDKAVEIKPSYAEAWYNRGNALVNLQRYQDAFTAYDKAVQINP 572

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
            + +A+  RG +L  L ++ +A++ L+  + I+P N +  Y +    H +  Y EA+  Y
Sbjct: 573 TYYQAWLSRGNILISLQRYPEAVESLNQVIQINPQNYQAWYAKGWSQHQMQRYNEALAAY 632

Query: 643 DAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           D A +L+ +  +        +Y +  +LY   K       +D     +P   E W  R
Sbjct: 633 DQAAELKRNDYQ-------LWYNRGNSLYNLQKYEEAIASYDRAVRYNPQHYESWFSR 683



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 10/235 (4%)

Query: 396 KYASAISIFDQI--LKED---PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           +Y  AIS ++Q   LK+D     Y +AL  +   R      E A+  + +A++  PS  E
Sbjct: 488 RYDEAISAYEQAINLKKDDYTAWYNKALTLQNLKR-----YEEAVRAYDKAVEIKPSYAE 542

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           AW  RG A   L    +A     KA++  P        RG +    + +  AVE L+  +
Sbjct: 543 AWYNRGNALVNLQRYQDAFTAYDKAVQINPTYYQAWLSRGNILISLQRYPEAVESLNQVI 602

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           +++ +N  A+   G +   +  Y +A  A+ +A +L RN  + W +      +L   E+A
Sbjct: 603 QINPQNYQAWYAKGWSQHQMQRYNEALAAYDQAAELKRNDYQLWYNRGNSLYNLQKYEEA 662

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +    + +  + +  +++  RG  L  L ++++AI   +  + I P N + +  R
Sbjct: 663 IASYDRAVRYNPQHYESWFSRGNALFNLLRYQEAIASYNQAIKIKPDNQQAIQAR 717



 Score = 47.0 bits (110), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 34/168 (20%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A VN  +Y  A + +D+ ++ +P Y +A + RG      +    A+    + IQ N
Sbjct: 546 NRGNALVNLQRYQDAFTAYDKAVQINPTYYQAWLSRGNILISLQRYPEAVESLNQVIQIN 605

Query: 446 PSAGEAW----------KRRGQARAALGESVE------------------------AIQD 471
           P   +AW          +R  +A AA  ++ E                        AI  
Sbjct: 606 PQNYQAWYAKGWSQHQMQRYNEALAAYDQAAELKRNDYQLWYNRGNSLYNLQKYEEAIAS 665

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             +A+ + P   +    RG   F    +  A+   +  +K+  +N+ A
Sbjct: 666 YDRAVRYNPQHYESWFSRGNALFNLLRYQEAIASYNQAIKIKPDNQQA 713



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 19/203 (9%)

Query: 8   DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILD-SLLAQS 66
           ++ Y L +    +   ++ V++    A A     + + L  L+ +  A+   D ++  Q 
Sbjct: 379 NTFYELQRYQDALSAFEKAVKIRPDYAEAWNG--QGSTLSKLKEYKAALTAYDRAIQIQP 436

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
             ++    R F    L+ ++  I   DKALQLD    Q +  KG   S+L R +EA+S +
Sbjct: 437 DYLEAWIGRGFVLKNLQRYQEAIASFDKALQLDTNSPQLWTTKGEVLSSLKRYDEAISAY 496

Query: 127 EKG-------YEHALHQSADLKQFLELEELLTAAKQDRSVTCE-------YDVSNSMSSL 172
           E+        Y    +++  L+     EE + A   D++V  +       Y+  N++ +L
Sbjct: 497 EQAINLKKDDYTAWYNKALTLQNLKRYEEAVRAY--DKAVEIKPSYAEAWYNRGNALVNL 554

Query: 173 TVSESGLNANDKMSETSENHNKS 195
              +    A DK  + +  + ++
Sbjct: 555 QRYQDAFTAYDKAVQINPTYYQA 577


>gi|67923685|ref|ZP_00517153.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67854485|gb|EAM49776.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 530

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 128/267 (47%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             +G+    + +Y +AI+ +D+ L+  P Y  A   RG A A     + AI+ + +A+Q 
Sbjct: 246 FEKGLIHTQQAEYEAAIASYDKALQLTPDYDLAWNNRGIALANVGRFDKAIASYDKALQL 305

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   EAW  RG A    G S EAI    KAL+ +P+     + RG    +    + A+ 
Sbjct: 306 TPDKDEAWCNRGIALFNRGRSDEAIASFDKALQLKPDDHQAWNNRGYALRQLGRSDEAIA 365

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++L  ++  A+   G AL  +G + +A  ++ KA+QL  ++ EAW +     + L
Sbjct: 366 SYDKALQLKPDDHQAWNNRGYALRQLGRFDEAIASYYKALQLKPDYYEAWHNRGIALRKL 425

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+    + L +   + +A+H RG+ L  LG+  +AI      L + P + +  Y 
Sbjct: 426 GRFDEAIASYDKALQLKPDYHQAWHNRGIALRKLGRFDEAIASYDKALQLKPDDHQAWYN 485

Query: 625 RASCYHAIGEYREAIKDYDAALDLELD 651
           R      +G   EAI  +D AL L+ D
Sbjct: 486 RGIALGNLGRLDEAIASFDKALQLKPD 512



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 112/285 (39%), Gaps = 41/285 (14%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E    +G     Q E EAAI+ + +A+Q  P    AW  RG A A +G   +AI    KA
Sbjct: 243 ELWFEKGLIHTQQAEYEAAIASYDKALQLTPDYDLAWNNRGIALANVGRFDKAIASYDKA 302

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L+  P+  +    RGI  F     + A+      ++L  ++  A+   G AL  +G   +
Sbjct: 303 LQLTPDKDEAWCNRGIALFNRGRSDEAIASFDKALQLKPDDHQAWNNRGYALRQLGRSDE 362

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A  ++ KA+QL  +  +AW +                                  RG  L
Sbjct: 363 AIASYDKALQLKPDDHQAWNN----------------------------------RGYAL 388

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
             LG+  +AI      L + P   E  + R      +G + EAI  YD AL L+ D  + 
Sbjct: 389 RQLGRFDEAIASYYKALQLKPDYYEAWHNRGIALRKLGRFDEAIASYDKALQLKPDYHQ- 447

Query: 656 FVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                 A++ + IAL    + +     +D    + P   + W  R
Sbjct: 448 ------AWHNRGIALRKLGRFDEAIASYDKALQLKPDDHQAWYNR 486



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 54/104 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA    G++  AI+ +D+ L+  P Y +A   RG A       + AI+ + +A+Q  
Sbjct: 417 NRGIALRKLGRFDEAIASYDKALQLKPDYHQAWHNRGIALRKLGRFDEAIASYDKALQLK 476

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           P   +AW  RG A   LG   EAI    KAL+ +P+    ++ R
Sbjct: 477 PDDHQAWYNRGIALGNLGRLDEAIASFDKALQLKPDEEIYINNR 520


>gi|386002707|ref|YP_005921006.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
 gi|357210763|gb|AET65383.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
          Length = 949

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 165/367 (44%), Gaps = 43/367 (11%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R  +  S   D   +RG+A  + G+Y  A+  +D+ +  DP   +    +G A    
Sbjct: 115 CYDRAMEFNSTGPDLWRARGLALYSLGRYEEAVRSYDEAIVFDPAQGDLWYQKGLALCGL 174

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              E AI  +  AI  +     +W  +  A  +LG + EAI    +A++ +P+  D+ + 
Sbjct: 175 GRYEKAIESYDFAITIDGDDAASWHGKALALYSLGRAEEAIDCYDRAIDIDPSLTDVWYN 234

Query: 489 RGIVNFK-------FKDFNAAVE-----------------------DLSAC----VKLDK 514
           +GI  +        FK ++AAVE                       +   C    + +D 
Sbjct: 235 KGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSLGRVEEAIDCYDRAIDIDP 294

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
              + +   G AL ++G + +A+E + +A+++D  +   W +L    Q L   E+ALE  
Sbjct: 295 SLVAVWNNKGNALYALGRFDEAQECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAY 354

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            +++ ID   S+A++ RGL L+ LG++ +A       L IDP N +  Y +A    ++G 
Sbjct: 355 DRLIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGR 414

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN-SEFCWFDIDGDIDPLF 693
           Y EA+  YD AL+      E    +C         LY+  + N S  C+ D+ G IDP +
Sbjct: 415 YEEALDCYDEALEAGPRRPEVLNNRC-------NILYSLERYNESVGCYGDVIG-IDPGY 466

Query: 694 KEYWCKR 700
           +  W  R
Sbjct: 467 ENAWYNR 473



 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 121/266 (45%), Gaps = 6/266 (2%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD  +  G A    G Y  A+  +D  +   P  P     RG        LE A+  F E
Sbjct: 501 VDAWVGMGDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRGLLLYNASRLEEAVESFDE 560

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            I+ +PS    W+ +G A  ALG S EAI    +ALE  P+   + + RG+V F    + 
Sbjct: 561 VIEIDPSYEGVWRLKGLALYALGRSDEAIDCYDEALEISPSEVSLWYNRGVVLFSLGRYG 620

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+E     ++LD+  K      G AL S+G Y +A E + K +++     +AW      
Sbjct: 621 EAIESYDRVIELDRYEK------GEALYSLGRYDEAIECYEKVLEVSPLEAKAWYQKGLA 674

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           +Q L + E++ EC  +V+ ID  + +    RG +L  LG +  A+      L  DP ++E
Sbjct: 675 HQILGDYERSAECYDRVVEIDPGYEEVILRRGFVLLRLGDYDGALASYDLALQEDPDDLE 734

Query: 621 CLYLRASCYHAIGEYREAIKDYDAAL 646
               R     A+G + EA   +D  L
Sbjct: 735 AARGRGEALLALGRFEEASATFDRIL 760



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 127/266 (47%), Gaps = 2/266 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L + I   +   Y  A+   ++ L  DP YP+A   +G   +    L+ A+S F  +++ 
Sbjct: 29  LGKAIGFYSNESYDLALLYVNKSLDIDPAYPDAWSLKGYILSDLGRLDEALSCFNRSLEI 88

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P     W  +G     LG   EAI    +A+EF     D+   RG+  +    +  AV 
Sbjct: 89  DPQDPHIWYSKGFVLYGLGIYDEAIDCYDRAMEFNSTGPDLWRARGLALYSLGRYEEAVR 148

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQD 563
                +  D      +   GLAL  +G Y+KA E++  AI +D +   +W G     Y  
Sbjct: 149 SYDEAIVFDPAQGDLWYQKGLALCGLGRYEKAIESYDFAITIDGDDAASWHGKALALYS- 207

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L  +E+A++C  + + ID   +  ++ +G+ L+ LG+H++A K   + + IDP      +
Sbjct: 208 LGRAEEAIDCYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWF 267

Query: 624 LRASCYHAIGEYREAIKDYDAALDLE 649
            +   ++++G   EAI  YD A+D++
Sbjct: 268 NKGLAFYSLGRVEEAIDCYDRAIDID 293



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/363 (23%), Positives = 153/363 (42%), Gaps = 41/363 (11%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R         D   ++GIA    G++  A   +D  ++ DP+Y  A   +G A    
Sbjct: 217 CYDRAIDIDPSLTDVWYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSL 276

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
             +E AI  +  AI  +PS    W  +G A  ALG   EA +   +A+E +P  ++  + 
Sbjct: 277 GRVEEAIDCYDRAIDIDPSLVAVWNNKGNALYALGRFDEAQECYRRAVEIDPEYSNPWYN 336

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            G+V  +      A+E     +++D     A+   GLAL S+G Y +A   + + +++D 
Sbjct: 337 LGVVLQRLGRGEEALEAYDRLIEIDPNLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDP 396

Query: 549 NFLEAW-------GHLTQFYQDLANSEKALE---------------------------CL 574
              + W       G L ++ + L   ++ALE                           C 
Sbjct: 397 ENGDVWYDKALALGSLGRYEEALDCYDEALEAGPRRPEVLNNRCNILYSLERYNESVGCY 456

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
             V+ ID  +  A++ RG+ L+ LG++++A         ++ S ++        + A G 
Sbjct: 457 GDVIGIDPGYENAWYNRGVALYTLGRYEEASASYGEAAALNGSRVDAWVGMGDAFAAAGI 516

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFK 694
           Y  A++ YD A+ L       +      +Y + + LY AS++      FD   +IDP ++
Sbjct: 517 YDRAVEAYDGAIAL-------YPGDPAVWYNRGLLLYNASRLEEAVESFDEVIEIDPSYE 569

Query: 695 EYW 697
             W
Sbjct: 570 GVW 572



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 156/354 (44%), Gaps = 47/354 (13%)

Query: 363 KRNKKFCVTRISKS-----KSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDP 412
           K N  + + R  ++     +++ +D   S      G+     G+   A+  +D++++ DP
Sbjct: 303 KGNALYALGRFDEAQECYRRAVEIDPEYSNPWYNLGVVLQRLGRGEEALEAYDRLIEIDP 362

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
              EA   RG A       + A   +   ++ +P  G+ W  +  A  +LG   EA+   
Sbjct: 363 NLSEAWYNRGLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCY 422

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            +ALE  P   ++L+ R  + +  + +N +V      + +D   ++A+   G+AL ++G 
Sbjct: 423 DEALEAGPRRPEVLNNRCNILYSLERYNESVGCYGDVIGIDPGYENAWYNRGVALYTLGR 482

Query: 533 YKKAEEAHLKAIQLDRNFLEAW---------------------GHLTQFYQD-------- 563
           Y++A  ++ +A  L+ + ++AW                     G +  +  D        
Sbjct: 483 YEEASASYGEAAALNGSRVDAWVGMGDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRG 542

Query: 564 --LANS---EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
             L N+   E+A+E   +V+ ID  +   + L+GL L+ LG+  +AI      L I PS 
Sbjct: 543 LLLYNASRLEEAVESFDEVIEIDPSYEGVWRLKGLALYALGRSDEAIDCYDEALEISPSE 602

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-VLQCLAFYQKEIALY 671
           +   Y R     ++G Y EAI+ YD    +ELD  EK   L  L  Y + I  Y
Sbjct: 603 VSLWYNRGVVLFSLGRYGEAIESYDRV--IELDRYEKGEALYSLGRYDEAIECY 654



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 1/282 (0%)

Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
           S  + I +D R  +G A  + G+Y  AI  ++++L+  P+  +A   +G A     + E 
Sbjct: 625 SYDRVIELD-RYEKGEALYSLGRYDEAIECYEKVLEVSPLEAKAWYQKGLAHQILGDYER 683

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           +   +   ++ +P   E   RRG     LG+   A+     AL+ +P+  +    RG   
Sbjct: 684 SAECYDRVVEIDPGYEEVILRRGFVLLRLGDYDGALASYDLALQEDPDDLEAARGRGEAL 743

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
                F  A       +    E+  A+   GLAL+ +  Y +A +++ +AI ++ +    
Sbjct: 744 LALGRFEEASATFDRILANASEDGGAWHGRGLALAGLLRYDEAIDSYDRAIAINSSDNLL 803

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           W       ++    E A+    + + +D+   +A+ +RG  L   G+ + A       + 
Sbjct: 804 WIGRGGVLEEAGRLEDAVASFDRAIALDQEDPEAWSMRGRALMKAGRLEDAAASFDRAIA 863

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
           +DPS+ E    R S + A G   EAI  Y+AA+ L+  + E+
Sbjct: 864 LDPSSGEAQRGRGSVFEAQGRAEEAIGCYEAAIALDPPTPER 905



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 138/332 (41%), Gaps = 13/332 (3%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R+ +    + D    + +A  + G+Y  A+  +D+ L+  P  PE L  R       
Sbjct: 387 CYDRVLEIDPENGDVWYDKALALGSLGRYEEALDCYDEALEAGPRRPEVLNNRCNILYSL 446

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
                ++  + + I  +P    AW  RG A   LG   EA     +A     +  D    
Sbjct: 447 ERYNESVGCYGDVIGIDPGYENAWYNRGVALYTLGRYEEASASYGEAAALNGSRVDAWVG 506

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            G        ++ AVE     + L   + + +   GL L +    ++A E+  + I++D 
Sbjct: 507 MGDAFAAAGIYDRAVEAYDGAIALYPGDPAVWYNRGLLLYNASRLEEAVESFDEVIEIDP 566

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           ++   W         L  S++A++C  + L I       ++ RG++L  LG++ +AI+  
Sbjct: 567 SYEGVWRLKGLALYALGRSDEAIDCYDEALEISPSEVSLWYNRGVVLFSLGRYGEAIESY 626

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
              + +D       Y +    +++G Y EAI+ Y+  L++         L+  A+YQK +
Sbjct: 627 DRVIELD------RYEKGEALYSLGRYDEAIECYEKVLEVS-------PLEAKAWYQKGL 673

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           A             +D   +IDP ++E   +R
Sbjct: 674 AHQILGDYERSAECYDRVVEIDPGYEEVILRR 705



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 124/306 (40%), Gaps = 28/306 (9%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   N  +   A+  FD++++ DP Y      +G A       + AI  + EA++ +
Sbjct: 540 NRGLLLYNASRLEEAVESFDEVIEIDPSYEGVWRLKGLALYALGRSDEAIDCYDEALEIS 599

Query: 446 PSAGEAWKRRG----------------------------QARAALGESVEAIQDLSKALE 477
           PS    W  RG                            +A  +LG   EAI+   K LE
Sbjct: 600 PSEVSLWYNRGVVLFSLGRYGEAIESYDRVIELDRYEKGEALYSLGRYDEAIECYEKVLE 659

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
             P  A   +++G+ +    D+  + E     V++D   +      G  L  +G+Y  A 
Sbjct: 660 VSPLEAKAWYQKGLAHQILGDYERSAECYDRVVEIDPGYEEVILRRGFVLLRLGDYDGAL 719

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
            ++  A+Q D + LEA     +    L   E+A     ++L        A+H RGL L G
Sbjct: 720 ASYDLALQEDPDDLEAARGRGEALLALGRFEEASATFDRILANASEDGGAWHGRGLALAG 779

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           L ++ +AI      + I+ S+      R       G   +A+  +D A+ L+ +  E + 
Sbjct: 780 LLRYDEAIDSYDRAIAINSSDNLLWIGRGGVLEEAGRLEDAVASFDRAIALDQEDPEAWS 839

Query: 658 LQCLAF 663
           ++  A 
Sbjct: 840 MRGRAL 845



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 104/252 (41%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  ++ +   +       +G+A    G Y  +   +D++++ DP Y E ++ RG      
Sbjct: 653 CYEKVLEVSPLEAKAWYQKGLAHQILGDYERSAECYDRVVEIDPGYEEVILRRGFVLLRL 712

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + A++ +  A+Q +P   EA + RG+A  ALG   EA     + L          H 
Sbjct: 713 GDYDGALASYDLALQEDPDDLEAARGRGEALLALGRFEEASATFDRILANASEDGGAWHG 772

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG+       ++ A++     + ++  +   +   G  L   G  + A  +  +AI LD+
Sbjct: 773 RGLALAGLLRYDEAIDSYDRAIAINSSDNLLWIGRGGVLEEAGRLEDAVASFDRAIALDQ 832

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              EAW    +        E A     + + +D    +A   RG +    G+ ++AI   
Sbjct: 833 EDPEAWSMRGRALMKAGRLEDAAASFDRAIALDPSSGEAQRGRGSVFEAQGRAEEAIGCY 892

Query: 609 SSGLGIDPSNIE 620
            + + +DP   E
Sbjct: 893 EAAIALDPPTPE 904



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 31/204 (15%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
           L +  K I   D  + +D   A++   +     L SL    +AI   D  +     + D+
Sbjct: 174 LGRYEKAIESYDFAITIDGDDAASWHGKA--LALYSLGRAEEAIDCYDRAIDIDPSLTDV 231

Query: 73  C-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
             N+      L  H+   +  D A+++DP    A+  KG AF +LGR EEA+  +++  +
Sbjct: 232 WYNKGIALYALGRHEEAFKCYDAAVEIDPLYHPAWFNKGLAFYSLGRVEEAIDCYDRAID 291

Query: 132 -------------HALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTV---- 174
                        +AL+    L +F E +E        R+V  + + SN   +L V    
Sbjct: 292 IDPSLVAVWNNKGNALYA---LGRFDEAQECYR-----RAVEIDPEYSNPWYNLGVVLQR 343

Query: 175 ---SESGLNANDKMSETSENHNKS 195
               E  L A D++ E   N +++
Sbjct: 344 LGRGEEALEAYDRLIEIDPNLSEA 367


>gi|91976940|ref|YP_569599.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
           palustris BisB5]
 gi|91683396|gb|ABE39698.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
           palustris BisB5]
          Length = 629

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 134/260 (51%), Gaps = 6/260 (2%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           + +GKYA AI   D+ +K+DP +P A   RG A+    + + A+SDF EA++ +P    A
Sbjct: 117 IEQGKYAGAIVELDRAVKQDPKFPFAYAWRGVAKMRIGKFDEAMSDFNEALKLDPRNAFA 176

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
             +RG A  AL ++ + + D++ ALE +  +A     RG++     D + A+ DL+  VK
Sbjct: 177 LGQRGNAFFALRDNGKGLADVNAALEIDNTAAAPYAFRGMIYSDMGDQDKALADLTRAVK 236

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLEAWGHLTQFYQDLANSE 568
           L+     A+  LG   S + E++K+  A+ +A++L  N   +L   G++   +  L   +
Sbjct: 237 LNPNLPPAHGGLGSVYSKLQEFEKSLAAYNRALELAPNTAAYLSGRGYV---HFSLGEYD 293

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+  + Q + I+ RF++ Y  RG           AIKD    L I+P NI  L  RA  
Sbjct: 294 RAITDISQAIAINSRFARPYINRGRAYIATNNLSAAIKDFDEALKIEPKNITALLQRAQA 353

Query: 629 YHAIGEYREAIKDYDAALDL 648
           +    ++ +A  D   AL L
Sbjct: 354 FERSRDFAKAQADLQDALKL 373


>gi|333996917|ref|YP_004529529.1| hypothetical protein TREPR_3648 [Treponema primitia ZAS-2]
 gi|333741255|gb|AEF86745.1| tetratricopeptide repeat protein [Treponema primitia ZAS-2]
          Length = 450

 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 137/272 (50%), Gaps = 5/272 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A   +G+Y  AI  +   +  DP Y +A + RG A  ++ +L+ AI+D+T AI+S+P 
Sbjct: 123 GLANSGKGEYHHAIRDYTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRSDPI 182

Query: 448 AGEAWKRRGQA---RAALGESV--EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
             +A+  RG A   +A + +S   +AI+D + A+  +PN+ D    RG       D++ A
Sbjct: 183 NTDAYIHRGLAYEVKAFIKKSKHGQAIEDFTIAINIDPNNVDAYTHRGNAYNYDGDYDRA 242

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D    ++++     AY   G +    G+   A +    AI +D N  +A+ +    Y 
Sbjct: 243 ITDFDQAIRINSNYAIAYINRGNSHYKKGDDDLAIKDFTMAISIDPNDADAYTYRGDAYS 302

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                 KA+E   Q + I+     AY  RG + +  G + +AI+D +  +GI+P +    
Sbjct: 303 RKREYRKAIEDYTQAININPDDINAYKTRGRIYYKKGDYNRAIEDYTQVIGINPDDAVAY 362

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSME 654
             R   Y+  G+Y +AI+DY  A+++  D  E
Sbjct: 363 NSRGIIYYKNGDYDQAIEDYTQAINIAPDYAE 394



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 155/311 (49%), Gaps = 15/311 (4%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKE 410
            L   +N  K      +   + + +I  D+    L+RG A   +GK   AI+ +   ++ 
Sbjct: 120 FLHGLANSGKGEYHHAIRDYTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRS 179

Query: 411 DPMYPEALIGRGTA---RAFQRELE--AAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
           DP+  +A I RG A   +AF ++ +   AI DFT AI  +P+  +A+  RG A    G+ 
Sbjct: 180 DPINTDAYIHRGLAYEVKAFIKKSKHGQAIEDFTIAINIDPNNVDAYTHRGNAYNYDGDY 239

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
             AI D  +A+    N A     RG  ++K  D + A++D +  + +D  +  AYTY G 
Sbjct: 240 DRAITDFDQAIRINSNYAIAYINRGNSHYKKGDDDLAIKDFTMAISIDPNDADAYTYRGD 299

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           A S   EY+KA E + +AI ++ + + A+    + Y    +  +A+E   QV+ I+   +
Sbjct: 300 AYSRKREYRKAIEDYTQAININPDDINAYKTRGRIYYKKGDYNRAIEDYTQVIGINPDDA 359

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG-------EYREA 638
            AY+ RG++ +  G + +AI+D +  + I P   E     A  +++ G       +Y +A
Sbjct: 360 VAYNSRGIIYYKNGDYDQAIEDYTQAINIAPDYAEANLNLAMAHNSRGIKYTKCHDYEQA 419

Query: 639 IKDYDAALDLE 649
           + D++ A+ ++
Sbjct: 420 LDDFNQAISVD 430



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 115/225 (51%), Gaps = 8/225 (3%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +VD    RG A   +G Y  AI+ FDQ ++ +  Y  A I RG +   + + + AI DFT
Sbjct: 222 NVDAYTHRGNAYNYDGDYDRAITDFDQAIRINSNYAIAYINRGNSHYKKGDDDLAIKDFT 281

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            AI  +P+  +A+  RG A +   E  +AI+D ++A+   P+  +    RG + +K  D+
Sbjct: 282 MAISIDPNDADAYTYRGDAYSRKREYRKAIEDYTQAININPDDINAYKTRGRIYYKKGDY 341

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           N A+ED +  + ++ ++  AY   G+     G+Y +A E + +AI +  ++ EA  +L  
Sbjct: 342 NRAIEDYTQVIGINPDDAVAYNSRGIIYYKNGDYDQAIEDYTQAINIAPDYAEANLNLAM 401

Query: 560 F-------YQDLANSEKALECLQQVLYIDKRFSKA-YHLRGLLLH 596
                   Y    + E+AL+   Q + +D  +  A Y+   LL+H
Sbjct: 402 AHNSRGIKYTKCHDYEQALDDFNQAISVDPNYYDARYNFENLLIH 446



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 136/320 (42%), Gaps = 39/320 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA---- 441
           +RG++   +G+Y SAI+ + Q +K DP    +L  RG         + A +DFT+A    
Sbjct: 19  NRGVSFEKKGEYDSAIADYTQAIKLDPCDAFSLFFRGRTYIKMGNSDQARADFTQANNID 78

Query: 442 ------------------------------IQSNPSAGEAWKRRGQARAALGESVEAIQD 471
                                         I  NP+   A+   G A +  GE   AI+D
Sbjct: 79  PNLAVLLKNQSSAYYHKGNYDIARWLCTFAIMLNPNDAAAYFLHGLANSGKGEYHHAIRD 138

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            +  +  +P+       RG         + A+ D +  ++ D  N  AY + GLA     
Sbjct: 139 YTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRSDPINTDAYIHRGLAYEVKA 198

Query: 532 EYKKAE-----EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
             KK++     E    AI +D N ++A+ H    Y    + ++A+    Q + I+  ++ 
Sbjct: 199 FIKKSKHGQAIEDFTIAINIDPNNVDAYTHRGNAYNYDGDYDRAITDFDQAIRINSNYAI 258

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY  RG   +  G    AIKD +  + IDP++ +    R   Y    EYR+AI+DY  A+
Sbjct: 259 AYINRGNSHYKKGDDDLAIKDFTMAISIDPNDADAYTYRGDAYSRKREYRKAIEDYTQAI 318

Query: 647 DLELDSMEKFVLQCLAFYQK 666
           ++  D +  +  +   +Y+K
Sbjct: 319 NINPDDINAYKTRGRIYYKK 338



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 9/262 (3%)

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P   EA   RG +   + E ++AI+D+T+AI+ +P    +   RG+    +G S +A  D
Sbjct: 11  PDTAEAFKNRGVSFEKKGEYDSAIADYTQAIKLDPCDAFSLFFRGRTYIKMGNSDQARAD 70

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            ++A   +PN A +L  +    +   +++ A    +  + L+  + +AY   GLA S  G
Sbjct: 71  FTQANNIDPNLAVLLKNQSSAYYHKGNYDIARWLCTFAIMLNPNDAAAYFLHGLANSGKG 130

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFY-----QDLANSEKALECLQQVLYIDKRFSK 586
           EY  A   +   I +D ++ +A+ +  Q Y      DLA ++  L      +  D    +
Sbjct: 131 EYHHAIRDYTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRSDPINTDAYIHR 190

Query: 587 --AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
             AY ++  +     +H +AI+D +  + IDP+N++    R + Y+  G+Y  AI D+D 
Sbjct: 191 GLAYEVKAFIKK--SKHGQAIEDFTIAINIDPNNVDAYTHRGNAYNYDGDYDRAITDFDQ 248

Query: 645 ALDLELDSMEKFVLQCLAFYQK 666
           A+ +  +    ++ +  + Y+K
Sbjct: 249 AIRINSNYAIAYINRGNSHYKK 270



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 2/221 (0%)

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           DL       P++A+    RG+   K  ++++A+ D +  +KLD  +  +  + G     +
Sbjct: 2   DLKAVDSSSPDTAEAFKNRGVSFEKKGEYDSAIADYTQAIKLDPCDAFSLFFRGRTYIKM 61

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G   +A     +A  +D N      + +  Y    N + A       + ++   + AY L
Sbjct: 62  GNSDQARADFTQANNIDPNLAVLLKNQSSAYYHKGNYDIARWLCTFAIMLNPNDAAAYFL 121

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            GL   G G++  AI+D ++ + IDP   +    R   Y   G+   AI DY  A+  + 
Sbjct: 122 HGLANSGKGEYHHAIRDYTATINIDPDYTQAYLNRGQAYCYKGKLDLAITDYTLAIRSDP 181

Query: 651 DSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
            + + ++ + LA+  K  A    SK       F I  +IDP
Sbjct: 182 INTDAYIHRGLAYEVK--AFIKKSKHGQAIEDFTIAINIDP 220


>gi|268324093|emb|CBH37681.1| hypothetical protein, containing TPR repeats [uncultured archaeon]
 gi|268326410|emb|CBH39998.1| hypothetical membrane protein, containing TPR repeats [uncultured
           archaeon]
          Length = 739

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 135/263 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A    G+Y  AI+  D+ ++ +P + EA   +G A       E AI+   +AI++N
Sbjct: 436 NKGAALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETN 495

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  +G A + LG+  EAI    KA+E     A     +GI       +  A+  
Sbjct: 496 PQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAIAA 555

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++++  +  A+   G+ALS +G+Y++A  AH KAI+++  +  AW +     + L 
Sbjct: 556 CDNAIEINPRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLG 615

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + + I+ ++++A++ +G+ L  LG+++ AI    + + I+P   +    +
Sbjct: 616 RYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNK 675

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
                 +G Y EAI  YD A+++
Sbjct: 676 GVALSDLGRYEEAIAAYDNAIEI 698



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 147/315 (46%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A  + G+Y  AI+  D+ ++ +  Y  A   +G A       E AI+ + +AI+ N
Sbjct: 368 NKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNNKGVALCDLGRNEEAIAAYDKAIEIN 427

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  +G A   LG   EAI    KA+E  P  A+  + +G    K   +  A+  
Sbjct: 428 PQFAGAWNNKGAALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAA 487

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++ + +   A+   GLALS +G+Y++A  AH KAI+++  +  AW +       L 
Sbjct: 488 CDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLG 547

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+      + I+ R ++A++ +G+ L GLG++++AI      + I+         +
Sbjct: 548 RYEEAIAACDNAIEINPRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNK 607

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                 +G Y EAI  YD A+++     E       A+  K IAL    K       +D 
Sbjct: 608 GVALRGLGRYEEAIAAYDEAVEINPQYAE-------AWNNKGIALCHLGKYEGAIAAYDN 660

Query: 686 DGDIDPLFKEYWCKR 700
             +I+P + + W  +
Sbjct: 661 AIEINPQYADAWTNK 675



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 142/303 (46%), Gaps = 7/303 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  AI+ F++ ++  P   EA   +G A       E AI+   +AI+ N     AW  
Sbjct: 343 GKYEEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNN 402

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   LG + EAI    KA+E  P  A   + +G    K   +  A+      ++++ 
Sbjct: 403 KGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACDKAIEINP 462

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+   G AL  +G Y++A  A  KAI+ +  + EAW +       L   E+A+   
Sbjct: 463 QFAEAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAH 522

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + + I+ +++ A+  +G+ L  LG++++AI    + + I+P + E    +      +G+
Sbjct: 523 DKAIEINSQYAGAWTNKGIALCHLGRYEEAIAACDNAIEINPRDAEAWNNKGVALSGLGK 582

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFK 694
           Y EAI  +D A  +E++S         A+  K +AL    +       +D   +I+P + 
Sbjct: 583 YEEAIAAHDKA--IEINSQ-----YAGAWNNKGVALRGLGRYEEAIAAYDEAVEINPQYA 635

Query: 695 EYW 697
           E W
Sbjct: 636 EAW 638



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 141/302 (46%), Gaps = 6/302 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI     G+   AI+ +D+ ++ +  Y +A   +G       + E AI+ F +AI+  
Sbjct: 300 NKGIVLGKLGRNEEAIAAYDKAIEINSQYAKAWNNKGATLGKLGKYEEAIAAFNKAIEIK 359

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  +G A   LG   EAI    KA+E     A   + +G+          A+  
Sbjct: 360 PQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNNKGVALCDLGRNEEAIAA 419

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++++ +   A+   G AL  +G Y++A  A  KAI+++  F EAW +       L 
Sbjct: 420 YDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACDKAIEINPQFAEAWNNKGAALGKLG 479

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + +  + ++++A++ +GL L GLG++++AI      + I+         +
Sbjct: 480 RYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNK 539

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKINSE 679
                 +G Y EAI   D A+++     E +      L  L  Y++ IA +  A +INS+
Sbjct: 540 GIALCHLGRYEEAIAACDNAIEINPRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQ 599

Query: 680 FC 681
           + 
Sbjct: 600 YA 601



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 128/264 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A    G+Y  AI+  D+ ++ +P Y EA   +G A +   + E AI+   +AI+ N
Sbjct: 470 NKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAIAAHDKAIEIN 529

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                AW  +G A   LG   EAI     A+E  P  A+  + +G+       +  A+  
Sbjct: 530 SQYAGAWTNKGIALCHLGRYEEAIAACDNAIEINPRDAEAWNNKGVALSGLGKYEEAIAA 589

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++++ +   A+   G+AL  +G Y++A  A+ +A++++  + EAW +       L 
Sbjct: 590 HDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAAYDEAVEINPQYAEAWNNKGIALCHLG 649

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E A+      + I+ +++ A+  +G+ L  LG++++AI    + + I+P   E    +
Sbjct: 650 KYEGAIAAYDNAIEINPQYADAWTNKGVALSDLGRYEEAIAAYDNAIEINPQLAEAWNNK 709

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
                  G Y EA + ++ A +++
Sbjct: 710 GVVLGWSGRYEEAKEAFEKAHEID 733



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 121/249 (48%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           ++   D+ ++ DP Y +    +G         E AI+ + +AI+ N    +AW  +G   
Sbjct: 280 SLQYLDKAVEIDPQYAQIWNNKGIVLGKLGRNEEAIAAYDKAIEINSQYAKAWNNKGATL 339

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             LG+  EAI   +KA+E +P  A+  + +G        +  A+      ++++ +   A
Sbjct: 340 GKLGKYEEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARA 399

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +   G+AL  +G  ++A  A+ KAI+++  F  AW +       L   E+A+    + + 
Sbjct: 400 WNNKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIAACDKAIE 459

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I+ +F++A++ +G  L  LG++++AI      +  +P   E    +      +G+Y EAI
Sbjct: 460 INPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEAI 519

Query: 640 KDYDAALDL 648
             +D A+++
Sbjct: 520 AAHDKAIEI 528



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 115/232 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A    GKY  AI+  D+ ++ +  Y  A   +G A       E AI+    AI+ N
Sbjct: 504 NKGLALSGLGKYEEAIAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAIAACDNAIEIN 563

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  +G A + LG+  EAI    KA+E     A   + +G+       +  A+  
Sbjct: 564 PRDAEAWNNKGVALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAA 623

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               V+++ +   A+   G+AL  +G+Y+ A  A+  AI+++  + +AW +      DL 
Sbjct: 624 YDEAVEINPQYAEAWNNKGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNKGVALSDLG 683

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             E+A+      + I+ + ++A++ +G++L   G++++A +       IDP+
Sbjct: 684 RYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYEEAKEAFEKAHEIDPT 735



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 6/261 (2%)

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           F   L  ++    +A++ +P   + W  +G     LG + EAI    KA+E     A   
Sbjct: 273 FNSNLNKSLQYLDKAVEIDPQYAQIWNNKGIVLGKLGRNEEAIAAYDKAIEINSQYAKAW 332

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + +G    K   +  A+   +  +++  +   A+   G AL  +G Y++A  AH KAI++
Sbjct: 333 NNKGATLGKLGKYEEAIAAFNKAIEIKPQCAEAWNNKGAALRDLGRYEEAIAAHDKAIEI 392

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           +  +  AW +      DL  +E+A+    + + I+ +F+ A++ +G  L  LG++++AI 
Sbjct: 393 NSQYARAWNNKGVALCDLGRNEEAIAAYDKAIEINPQFAGAWNNKGAALGKLGRYEEAIA 452

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCL 661
                + I+P   E    + +    +G Y EAI   D A++      E +      L  L
Sbjct: 453 ACDKAIEINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGL 512

Query: 662 AFYQKEIALY-TASKINSEFC 681
             Y++ IA +  A +INS++ 
Sbjct: 513 GKYEEAIAAHDKAIEINSQYA 533



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 106/492 (21%), Positives = 201/492 (40%), Gaps = 72/492 (14%)

Query: 51  NWSKAIRILDSLLAQSYE--IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
           N++ AI    S  A+ YE     +C  A CY         ++  DKA+++DP   Q +  
Sbjct: 243 NFTSAITFFTS--AKDYENCSSTLCYIASCYYFNSNLNKSLQYLDKAVEIDPQYAQIWNN 300

Query: 109 KGCAFSALGRKEEALSVWEKG------YEHAL-HQSADLKQFLELEELLTAAKQDRSV-- 159
           KG     LGR EEA++ ++K       Y  A  ++ A L +  + EE + A  +   +  
Sbjct: 301 KGIVLGKLGRNEEAIAAYDKAIEINSQYAKAWNNKGATLGKLGKYEEAIAAFNKAIEIKP 360

Query: 160 TCEYDVSN---SMSSLTVSESGLNANDKMSETSE------NHNKSDICDSSSQSRDVSET 210
            C    +N   ++  L   E  + A+DK  E +       N+    +CD       ++  
Sbjct: 361 QCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNNKGVALCDLGRNEEAIAAY 420

Query: 211 CSKSSHDPDLCN------------GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSS 258
                 +P                GR +EA     +      + IN +  E + N+ G++
Sbjct: 421 DKAIEINPQFAGAWNNKGAALGKLGRYEEA-----IAACDKAIEINPQFAE-AWNNKGAA 474

Query: 259 DG-----SKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSS 313
            G      ++  A   A E N Q ++ ++               G   +G     + +++
Sbjct: 475 LGKLGRYEEAIAACDKAIETNPQYAEAWN-------------NKGLALSGLGKYEEAIAA 521

Query: 314 DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRI 373
              ++  ++  + +++   I+        E+ +      ++    + EA  NK   ++ +
Sbjct: 522 HDKAIEINSQYAGAWTNKGIALCHLGRYEEAIAACDNAIEINPRDA-EAWNNKGVALSGL 580

Query: 374 SK--------SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
            K         K+I ++ + +     +G+A    G+Y  AI+ +D+ ++ +P Y EA   
Sbjct: 581 GKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAAYDEAVEINPQYAEAWNN 640

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G A     + E AI+ +  AI+ NP   +AW  +G A + LG   EAI     A+E  P
Sbjct: 641 KGIALCHLGKYEGAIAAYDNAIEINPQYADAWTNKGVALSDLGRYEEAIAAYDNAIEINP 700

Query: 481 NSADILHERGIV 492
             A+  + +G+V
Sbjct: 701 QLAEAWNNKGVV 712



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 94/482 (19%), Positives = 184/482 (38%), Gaps = 67/482 (13%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
           +L +  + I   D+ + ++S  A A   +   A L  L  + +AI   +    ++ EI+ 
Sbjct: 307 KLGRNEEAIAAYDKAIEINSQYAKAWNNK--GATLGKLGKYEEAIAAFN----KAIEIKP 360

Query: 72  IC-----NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
            C     N+      L  ++  I   DKA++++    +A+  KG A   LGR EEA++ +
Sbjct: 361 QCAEAWNNKGAALRDLGRYEEAIAAHDKAIEINSQYARAWNNKGVALCDLGRNEEAIAAY 420

Query: 127 EKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMS 186
           +K               +E+      A  ++          ++  L   E  + A DK  
Sbjct: 421 DKA--------------IEINPQFAGAWNNKGA--------ALGKLGRYEEAIAACDKAI 458

Query: 187 ETSEN-----HNKSDICDSSSQSRDVSETCSKS-SHDPDLCNGRSDEAKGGSSVPVSKSG 240
           E +       +NK        +  +    C K+   +P      +++    S +   +  
Sbjct: 459 EINPQFAEAWNNKGAALGKLGRYEEAIAACDKAIETNPQYAEAWNNKGLALSGLGKYEEA 518

Query: 241 LHINGKLREVSENHNG--SSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHG 298
           +  + K  E++  + G  ++ G    H  R    I   ++ D  I   P D  + N + G
Sbjct: 519 IAAHDKAIEINSQYAGAWTNKGIALCHLGRYEEAI---AACDNAIEINPRDAEAWNNK-G 574

Query: 299 RQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKET 358
              +G     + +++   ++  ++  + +++   ++        E+ +      ++  + 
Sbjct: 575 VALSGLGKYEEAIAAHDKAIEINSQYAGAWNNKGVALRGLGRYEEAIAAYDEAVEINPQY 634

Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           + EA  NK   +  + K +           IA      Y +AI I  Q       Y +A 
Sbjct: 635 A-EAWNNKGIALCHLGKYEG---------AIAA-----YDNAIEINPQ-------YADAW 672

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
             +G A +     E AI+ +  AI+ NP   EAW  +G      G   EA +   KA E 
Sbjct: 673 TNKGVALSDLGRYEEAIAAYDNAIEINPQLAEAWNNKGVVLGWSGRYEEAKEAFEKAHEI 732

Query: 479 EP 480
           +P
Sbjct: 733 DP 734


>gi|428320482|ref|YP_007118364.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244162|gb|AFZ09948.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 1011

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 161/336 (47%), Gaps = 38/336 (11%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+   G+ A AIS ++Q +  DP    A + RG  +    E E AISD+ +AI+ N
Sbjct: 624 NRGSAKYELGQKAEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAISDYNQAIELN 683

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN------------ 493
           P+  +A+  RG A +ALG++ + + D ++A+E  PN +D  + R + N            
Sbjct: 684 PNYADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAYYTRSVANSALETAEEILVD 743

Query: 494 ------FKFKDFNA----------------AVEDLSACVKLDKENKSAYTYLGLALSSIG 531
                   +   NA                A+ D +  ++L+ ++  AY   GLA  ++G
Sbjct: 744 YTQALDLNYNSANAYFRRGSSKSDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLG 803

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           E ++A   + +AI L+  + +A+ +       L  +E+A+    Q L ++  ++ AY  R
Sbjct: 804 ENEEALADYNQAIHLNSCYADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNR 863

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           GL    LGQ  +AI D +  + IDP        R +   A+GE  EAI DY  A++L   
Sbjct: 864 GLAKSALGQKAEAIADYNQAIDIDPKLAVAYNNRGNTKSALGEKTEAIADYTKAIELNYY 923

Query: 652 SMEKFVLQCLAFY---QKEIALYTASKINSEFCWFD 684
           +   +  + L  Y   ++E A+   SK+  E  +++
Sbjct: 924 NPHPYYNRGLTKYNLGEQEAAIADYSKV-IELSYYN 958



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 135/298 (45%), Gaps = 34/298 (11%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A+  EGK   AI+ ++Q +  +P Y +A   RG A+    + E AI+D+ +AI  N
Sbjct: 318 TQGLAKYREGKIEEAIANYNQAIDLNPNYADAYHNRGLAKYNLEKREEAIADYNQAIDLN 377

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF----------- 494
           P     +  RG A++ LG   EA+ D ++A+E + N AD  + RG V +           
Sbjct: 378 PKLAAGYNNRGLAKSRLGRIEEALADYNQAIELDANDADAYNNRGNVKYELGAKQEARAD 437

Query: 495 --KFKDFNAAV---------------------EDLSACVKLDKENKSAYTYLGLALSSIG 531
             K  D N  +                        S  V L+ +   AY   G     IG
Sbjct: 438 FVKANDLNPKLAFVYFKRGVGKSELAEKAEALAAFSNAVNLNPKLAVAYLLRGNIKGEIG 497

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
             ++A   + +AI LD     A+ +       L +  +AL    Q ++++ +FS AY  R
Sbjct: 498 NQEEALADYNQAIHLDPKLSAAYVNRGIVKSALGHKAEALADYNQAIHLEPKFSAAYVNR 557

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           G++   LGQ  +AI D +  + ++P        R +    +G   EAI DY+ ALDL+
Sbjct: 558 GMVKSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAISDYNQALDLD 615



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 148/679 (21%), Positives = 277/679 (40%), Gaps = 69/679 (10%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDSL 62
           ++Y+L K  + + + ++ + ++  +ASA   R  L K        +L ++++AI  LD  
Sbjct: 118 AKYKLGKIEEALSDYNQAIELNPKLASAYLNR-GLTKSSLGKKEEALSDYNQAID-LDPK 175

Query: 63  LAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
            A +Y       RA    +L   +  + D  KA+ LD  L  AY+ +G   S L  K EA
Sbjct: 176 RAAAY-----VGRALVKHELGKKEEALSDYTKAIDLDSKLDVAYVGRGLVKSELEEKAEA 230

Query: 123 LSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESG--LN 180
           +              AD  + +EL      A ++R +  ++ +     +L        L+
Sbjct: 231 I--------------ADYTKAIELNPKDVGAYKNRGL-AKFSLGRIEEALADYNQAIDLD 275

Query: 181 ANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSG 240
            ND  +  +    K ++ +      D       ++ +P L             V     G
Sbjct: 276 PNDADAYNNRGKVKYELGEKEEARADF---VKANNLNPKLA------------VAYYTQG 320

Query: 241 L--HINGKLREVSENHNGSSDGSKS---THASRDASEINRQSSD----DFD--------I 283
           L  +  GK+ E   N+N + D + +    + +R  ++ N +  +    D++        +
Sbjct: 321 LAKYREGKIEEAIANYNQAIDLNPNYADAYHNRGLAKYNLEKREEAIADYNQAIDLNPKL 380

Query: 284 CNGPIDKASVNERHGRQTNGTHDVHDKLSSDS----ASLNDSNTNSESYSKSSISDN--K 337
             G  ++     R GR      D +  +  D+    A  N  N   E  +K     +  K
Sbjct: 381 AAGYNNRGLAKSRLGRIEEALADYNQAIELDANDADAYNNRGNVKYELGAKQEARADFVK 440

Query: 338 SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKY 397
           ++D     + + FK  + K    E           ++ +  ++V + L RG  +   G  
Sbjct: 441 ANDLNPKLAFVYFKRGVGKSELAEKAEALAAFSNAVNLNPKLAVAYLL-RGNIKGEIGNQ 499

Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
             A++ ++Q +  DP    A + RG  ++       A++D+ +AI   P    A+  RG 
Sbjct: 500 EEALADYNQAIHLDPKLSAAYVNRGIVKSALGHKAEALADYNQAIHLEPKFSAAYVNRGM 559

Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
            ++ LG+  EAI D ++A+E  P  A     RG    +      A+ D +  + LD +  
Sbjct: 560 VKSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAISDYNQALDLDPKLA 619

Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
            AY   G A   +G+  +A   + +AI LD     A+        DL   E+A+    Q 
Sbjct: 620 VAYANRGSAKYELGQKAEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAISDYNQA 679

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
           + ++  ++ AY+ RGL    LG+ +  + D +  + ++P+  +  Y R+    A+    E
Sbjct: 680 IELNPNYADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAYYTRSVANSALETAEE 739

Query: 638 AIKDYDAALDLELDSMEKF 656
            + DY  ALDL  +S   +
Sbjct: 740 ILVDYTQALDLNYNSANAY 758



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 135/264 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG+ + + G+ A AIS ++Q ++ +P    A + RG A++       AISD+ +A+  
Sbjct: 555 VNRGMVKSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAISDYNQALDL 614

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+  RG A+  LG+  EAI D ++A++ +P  A    ERG V +   +   A+ 
Sbjct: 615 DPKLAVAYANRGSAKYELGQKAEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAIS 674

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++L+     AY   GLA S++G+ +       +AI+L+ N+ +A+   +     L
Sbjct: 675 DYNQAIELNPNYADAYYTRGLANSALGKTEDPLADRTQAIELNPNYSDAYYTRSVANSAL 734

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             +E+ L    Q L ++   + AY  RG     + +  +AI D +  + ++P +      
Sbjct: 735 ETAEEILVDYTQALDLNYNSANAYFRRGSSKSDVEKKAEAIADYNQAIELNPKDAVAYNN 794

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R    + +GE  EA+ DY+ A+ L
Sbjct: 795 RGLAKYNLGENEEALADYNQAIHL 818



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 133/267 (49%), Gaps = 6/267 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG A+   G  A AIS ++Q L  DP    A   RG+A+    +   AISD+ +AI  
Sbjct: 589 VNRGAAKSELGHKAEAISDYNQALDLDPKLAVAYANRGSAKYELGQKAEAISDYNQAIDL 648

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+  RG  +  LGE  EAI D ++A+E  PN AD  + RG+ N         + 
Sbjct: 649 DPKLAIAYVERGYVKYDLGEKEEAISDYNQAIELNPNYADAYYTRGLANSALGKTEDPLA 708

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFY 561
           D +  ++L+     AY    +A S++   + AEE    + +A+ L+ N   A+       
Sbjct: 709 DRTQAIELNPNYSDAYYTRSVANSAL---ETAEEILVDYTQALDLNYNSANAYFRRGSSK 765

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            D+    +A+    Q + ++ + + AY+ RGL  + LG++++A+ D +  + ++    + 
Sbjct: 766 SDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLGENEEALADYNQAIHLNSCYADA 825

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
              R      +G+  EAI DY+ ALDL
Sbjct: 826 YNNRGLAKSFLGQTEEAIADYNQALDL 852



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 139/263 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+   GK   A+S ++Q ++ +P    A + RG  ++   + E A+SD+ +AI  +
Sbjct: 114 NRGLAKYKLGKIEEALSDYNQAIELNPKLASAYLNRGLTKSSLGKKEEALSDYNQAIDLD 173

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  R   +  LG+  EA+ D +KA++ +         RG+V  + ++   A+ D
Sbjct: 174 PKRAAAYVGRALVKHELGKKEEALSDYTKAIDLDSKLDVAYVGRGLVKSELEEKAEAIAD 233

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+ ++  AY   GLA  S+G  ++A   + +AI LD N  +A+ +  +   +L 
Sbjct: 234 YTKAIELNPKDVGAYKNRGLAKFSLGRIEEALADYNQAIDLDPNDADAYNNRGKVKYELG 293

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A     +   ++ + + AY+ +GL  +  G+ ++AI + +  + ++P+  +  + R
Sbjct: 294 EKEEARADFVKANNLNPKLAVAYYTQGLAKYREGKIEEAIANYNQAIDLNPNYADAYHNR 353

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
               + + +  EAI DY+ A+DL
Sbjct: 354 GLAKYNLEKREEAIADYNQAIDL 376



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 129/258 (50%), Gaps = 4/258 (1%)

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P + +A   RG A+    ++E A+SD+ +AI+ NP    A+  RG  +++LG+  EA+ D
Sbjct: 106 PTFADAYNNRGLAKYKLGKIEEALSDYNQAIELNPKLASAYLNRGLTKSSLGKKEEALSD 165

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            ++A++ +P  A     R +V  +      A+ D +  + LD +   AY   GL  S + 
Sbjct: 166 YNQAIDLDPKRAAAYVGRALVKHELGKKEEALSDYTKAIDLDSKLDVAYVGRGLVKSELE 225

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           E  +A   + KAI+L+   + A+ +  L +F   L   E+AL    Q + +D   + AY+
Sbjct: 226 EKAEAIADYTKAIELNPKDVGAYKNRGLAKF--SLGRIEEALADYNQAIDLDPNDADAYN 283

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            RG + + LG+ ++A  D      ++P      Y +    +  G+  EAI +Y+ A+DL 
Sbjct: 284 NRGKVKYELGEKEEARADFVKANNLNPKLAVAYYTQGLAKYREGKIEEAIANYNQAIDLN 343

Query: 650 LDSMEKFVLQCLAFYQKE 667
            +  + +  + LA Y  E
Sbjct: 344 PNYADAYHNRGLAKYNLE 361



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 115/242 (47%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG  ++   E   A++ F+ A+  NP    A+  RG  +  +G   EA+ D ++A+  +P
Sbjct: 455 RGVGKSELAEKAEALAAFSNAVNLNPKLAVAYLLRGNIKGEIGNQEEALADYNQAIHLDP 514

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
             +     RGIV         A+ D +  + L+ +  +AY   G+  S +G+  +A   +
Sbjct: 515 KLSAAYVNRGIVKSALGHKAEALADYNQAIHLEPKFSAAYVNRGMVKSDLGQKAEAISDY 574

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI+L+     A+ +      +L +  +A+    Q L +D + + AY  RG   + LGQ
Sbjct: 575 NQAIELNPKLALAYVNRGAAKSELGHKAEAISDYNQALDLDPKLAVAYANRGSAKYELGQ 634

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
             +AI D +  + +DP        R    + +GE  EAI DY+ A++L  +  + +  + 
Sbjct: 635 KAEAISDYNQAIDLDPKLAIAYVERGYVKYDLGEKEEAISDYNQAIELNPNYADAYYTRG 694

Query: 661 LA 662
           LA
Sbjct: 695 LA 696



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 104/506 (20%), Positives = 216/506 (42%), Gaps = 59/506 (11%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITAR--IELA---KLCSLRNWSKAIRILDSLLAQSY 67
           +    + + + ++ + +D  +++A   R  ++ A   K  +L ++++AI  L+   + +Y
Sbjct: 496 IGNQEEALADYNQAIHLDPKLSAAYVNRGIVKSALGHKAEALADYNQAIH-LEPKFSAAY 554

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
                 NR    S L      I D ++A++L+P L  AY+ +G A S LG K EA+S   
Sbjct: 555 -----VNRGMVKSDLGQKAEAISDYNQAIELNPKLALAYVNRGAAKSELGHKAEAIS--- 606

Query: 128 KGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMS- 186
                      D  Q L+L+  L  A  +R  + +Y++     +++     ++ + K++ 
Sbjct: 607 -----------DYNQALDLDPKLAVAYANRG-SAKYELGQKAEAISDYNQAIDLDPKLAI 654

Query: 187 -ETSENHNKSDICDSSSQSRDVSETCSKSSHDPD--LCNGRSDEAKGGSSVPVSKSGLHI 243
                 + K D+ +      D ++    + +  D     G ++ A G +  P++     I
Sbjct: 655 AYVERGYVKYDLGEKEEAISDYNQAIELNPNYADAYYTRGLANSALGKTEDPLADRTQAI 714

Query: 244 NGKLREVSENHNGSSDG----SKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGR 299
                E++ N+   SD     S +  A   A EI    +   D+     + A+   R G 
Sbjct: 715 -----ELNPNY---SDAYYTRSVANSALETAEEILVDYTQALDLN---YNSANAYFRRGS 763

Query: 300 QTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETS 359
             +      + ++  + ++  +  ++ +Y+   ++     ++ E+ +  + +   L    
Sbjct: 764 SKSDVEKKAEAIADYNQAIELNPKDAVAYNNRGLAKYNLGENEEALADYN-QAIHLNSCY 822

Query: 360 NEAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQ 406
            +A  N+    + + +++    D+              L+RG+A+   G+ A AI+ ++Q
Sbjct: 823 ADAYNNRGLAKSFLGQTEEAIADYNQALDLNSCYADAYLNRGLAKSALGQKAEAIADYNQ 882

Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
            +  DP    A   RG  ++   E   AI+D+T+AI+ N      +  RG  +  LGE  
Sbjct: 883 AIDIDPKLAVAYNNRGNTKSALGEKTEAIADYTKAIELNYYNPHPYYNRGLTKYNLGEQE 942

Query: 467 EAIQDLSKALEFEPNSADILHERGIV 492
            AI D SK +E    +A   + RG+ 
Sbjct: 943 AAIADYSKVIELSYYNAHAYYNRGLA 968



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 34/55 (61%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
           NR     +L   +  + D ++A++L+P L  AY+ +G   S+LG+KEEALS + +
Sbjct: 114 NRGLAKYKLGKIEEALSDYNQAIELNPKLASAYLNRGLTKSSLGKKEEALSDYNQ 168


>gi|225621425|ref|YP_002722684.1| hypothetical protein BHWA1_02527 [Brachyspira hyodysenteriae WA1]
 gi|225216246|gb|ACN84980.1| hypothetical protein BHWA1_02527 [Brachyspira hyodysenteriae WA1]
          Length = 617

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 144/267 (53%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG+A+ + G +  AI  ++++++ D    +A   RG ++ + +  + A+ DF + 
Sbjct: 194 DAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGVSKNYLQLFDEAMKDFNKI 253

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++  P+   A+  RG ++  LG   EAI+D +KA+E  PN +D  + RG    +   F  
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELGLFKE 313

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ED    +K    + +AY   G A   +  Y++A + + K I+LD N+++A+ +     
Sbjct: 314 AIEDYDNAIKWKPNDINAYMSRGNAKYDLELYEEAMKDYDKIIKLDHNYVDAYYNRANAK 373

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           ++L   +++++   + +Y++  +S AY+ RGL    LG +++AIKD    + +   N E 
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEEAIKDYEESIDLCADNPEA 433

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
            Y   S  + +   +++IK YD A++L
Sbjct: 434 YYNIGSAKYDLDLLKDSIKYYDKAIEL 460



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 135/267 (50%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG ++   G +  AI  +D  +K  P    A + RG A+      E A+ D+ + 
Sbjct: 296 DAYYNRGNSKKELGLFKEAIEDYDNAIKWKPNDINAYMSRGNAKYDLELYEEAMKDYDKI 355

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ + +  +A+  R  A+  LG   E+I+D  KA+   PN +D  + RG+   +   +  
Sbjct: 356 IKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEE 415

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A++D    + L  +N  AY  +G A   +   K + + + KAI+L   + EA+ +     
Sbjct: 416 AIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKDSIKYYDKAIELRPTYSEAYNNRGLSK 475

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            DL   ++A++   + + ++   S  Y+ RGL  + LG +K+AIKD +  + + P+    
Sbjct: 476 NDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPNYTNA 535

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
              R S    +G+Y+EAIKDYD A++L
Sbjct: 536 YGNRGSAKDELGQYKEAIKDYDKAIEL 562



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 138/263 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           + G+A  N G Y  AI  + + +     Y  A   RG AR      + AI D+ +AI+ +
Sbjct: 130 TNGVALNNMGSYRYAIDKYSEAIDLIDYYALAYYNRGLARNNLGFFKKAIKDYDKAIELS 189

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  +A+  RG A+   G   EAI+D +K +E +  + D  + RG+     + F+ A++D
Sbjct: 190 KNYKDAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGVSKNYLQLFDEAMKD 249

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+  N  AY+  G + + +G YK+A E + KAI+++ N+ +A+ +     ++L 
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELG 309

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+E     +        AY  RG   + L  +++A+KD    + +D + ++  Y R
Sbjct: 310 LFKEAIEDYDNAIKWKPNDINAYMSRGNAKYDLELYEEAMKDYDKIIKLDHNYVDAYYNR 369

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
           A+    +G Y+E+IKDYD A+ L
Sbjct: 370 ANAKRELGLYKESIKDYDKAIYL 392



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 151/303 (49%), Gaps = 34/303 (11%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           ++D   +RG+++     +  A+  F++IL+ +P    A   RG ++      + AI D+ 
Sbjct: 226 NIDAYNNRGVSKNYLQLFDEAMKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYN 285

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI+ NP+  +A+  RG ++  LG   EAI+D   A++++PN  +    RG   +  + +
Sbjct: 286 KAIEINPNYSDAYYNRGNSKKELGLFKEAIEDYDNAIKWKPNDINAYMSRGNAKYDLELY 345

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-- 557
             A++D    +KLD     AY     A   +G YK++ + + KAI L+ N+ +A+ +   
Sbjct: 346 EEAMKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGL 405

Query: 558 -------------------------TQFYQDLANSEKALECLQQ-VLYIDK------RFS 585
                                     + Y ++ +++  L+ L+  + Y DK       +S
Sbjct: 406 SKSELGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKDSIKYYDKAIELRPTYS 465

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           +AY+ RGL  + LG +K+AIKD    + ++P++      R    +++G Y+EAIKDY  A
Sbjct: 466 EAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKEAIKDYTKA 525

Query: 646 LDL 648
           ++L
Sbjct: 526 IEL 528



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 142/278 (51%), Gaps = 10/278 (3%)

Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---EA 433
           K   ++  +SRG A+ +   Y  A+  +D+I+K D  Y +A   R  A+   REL   + 
Sbjct: 325 KPNDINAYMSRGNAKYDLELYEEAMKDYDKIIKLDHNYVDAYYNRANAK---RELGLYKE 381

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           +I D+ +AI  NP+  +A+  RG +++ LG   EAI+D  ++++   ++ +  +  G   
Sbjct: 382 SIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEEAIKDYEESIDLCADNPEAYYNIGSAK 441

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           +       +++     ++L      AY   GL+ + +G YK+A + + K+I+L+ N    
Sbjct: 442 YDLDLLKDSIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDSNT 501

Query: 554 WGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           + +  LT++   L   ++A++   + + +   ++ AY  RG     LGQ+K+AIKD    
Sbjct: 502 YNNRGLTKY--SLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDKA 559

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           + + P+       R       G Y+EA+KDY  AL+L+
Sbjct: 560 IELAPNTAYLYNDRGWVKKNAGLYKEALKDYKKALELD 597



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 26/299 (8%)

Query: 337 KSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGK 396
           K +D     S+ + K+D+  E   EA ++      +I K     VD   +R  A+   G 
Sbjct: 325 KPNDINAYMSRGNAKYDL--ELYEEAMKD----YDKIIKLDHNYVDAYYNRANAKRELGL 378

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  +D+ +  +P Y +A   RG +++     E AI D+ E+I       EA+   G
Sbjct: 379 YKESIKDYDKAIYLNPNYSDAYNNRGLSKSELGMYEEAIKDYEESIDLCADNPEAYYNIG 438

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            A+  L    ++I+   KA+E  P  ++  + RG+       +  A++D    ++L+  +
Sbjct: 439 SAKYDLDLLKDSIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPND 498

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQDLANSEK 569
            + Y   GL   S+G YK+A + + KAI+L  N+  A+G+       L Q+ + + + +K
Sbjct: 499 SNTYNNRGLTKYSLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDK 558

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP------SNIECL 622
           A+E      Y+       Y+ RG +    G +K+A+KD    L +DP      SNIE L
Sbjct: 559 AIELAPNTAYL-------YNDRGWVKKNAGLYKEALKDYKKALELDPNNEYAKSNIESL 610



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 111/215 (51%), Gaps = 4/215 (1%)

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   +G    AI   S+A++     A   + RG+       F  A++D    ++L K 
Sbjct: 132 GVALNNMGSYRYAIDKYSEAIDLIDYYALAYYNRGLARNNLGFFKKAIKDYDKAIELSKN 191

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALEC 573
            K AY   G+A +  G +K+A E + K I+LD   ++A+ +  +++ Y  L   ++A++ 
Sbjct: 192 YKDAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGVSKNYLQLF--DEAMKD 249

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             ++L ++     AY  RG   + LG +K+AI+D +  + I+P+  +  Y R +    +G
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKAIEINPNYSDAYYNRGNSKKELG 309

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
            ++EAI+DYD A+  + + +  ++ +  A Y  E+
Sbjct: 310 LFKEAIEDYDNAIKWKPNDINAYMSRGNAKYDLEL 344



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 10/92 (10%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +++++ K I+ LD     +Y      NRA    +L L+K  I+D DKA+ L+P    AY 
Sbjct: 348 AMKDYDKIIK-LDHNYVDAY-----YNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYN 401

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
            +G + S LG  EEA+    K YE ++   AD
Sbjct: 402 NRGLSKSELGMYEEAI----KDYEESIDLCAD 429



 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 32/60 (53%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
           NR      L L+K  I+D  KA++L P    AY  +G A   LG+ +EA+  ++K  E A
Sbjct: 504 NRGLTKYSLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDKAIELA 563


>gi|254412800|ref|ZP_05026573.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196180535|gb|EDX75526.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 595

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 138/278 (49%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T++ +    + D    RG+A+ +   +  A+  F ++++      +A   RG A     +
Sbjct: 263 TKLIELAPSNTDAYYQRGLARYDLEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQ 322

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            +AAI+D  +AIQ NP   +A+  RG   +A+G   EA+ D ++A+E+ PN A   + RG
Sbjct: 323 YKAAIADLDQAIQLNPQNAQAYAARGLVLSAMGNQQEAMADYTQAIEYNPNDAKAYYNRG 382

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
              F   D+  AV+D +  + +D  +  AYT    A  ++G Y+ A     +AI  + N 
Sbjct: 383 RTRFHLADYRGAVDDYTQAIAIDPTDSMAYTNRCQAKFNLGNYRDAIADCTEAITQNPNN 442

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +    + +L + +KAL+   Q + I+  +  AY  RG +   LG ++ A++D + 
Sbjct: 443 HIAYNNRCIAHLNLKDYQKALKDCSQSIRIEPSYENAYINRGEIRRKLGDNQGALEDYTQ 502

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            + ++P+N      RA      G+   A+ DY  A+ L
Sbjct: 503 AIRLNPNNSVAYTNRARVRRKFGDNSGALDDYTKAIQL 540



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 136/265 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             +G+  +  G    AI  FD+ ++ +P  P A   RG A       +AA+ D+T+ I+ 
Sbjct: 209 FEQGVEHLKSGNVQGAIEAFDESIQLNPNNPLAYGNRGIAYDDLGAHQAAVEDYTKLIEL 268

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            PS  +A+ +RG AR  L +   A++D ++ ++ + N     + RGI N++   + AA+ 
Sbjct: 269 APSNTDAYYQRGLARYDLEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQYKAAIA 328

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           DL   ++L+ +N  AY   GL LS++G  ++A   + +AI+ + N  +A+ +  +    L
Sbjct: 329 DLDQAIQLNPQNAQAYAARGLVLSAMGNQQEAMADYTQAIEYNPNDAKAYYNRGRTRFHL 388

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
           A+   A++   Q + ID   S AY  R      LG ++ AI D +  +  +P+N      
Sbjct: 389 ADYRGAVDDYTQAIAIDPTDSMAYTNRCQAKFNLGNYRDAIADCTEAITQNPNNHIAYNN 448

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           R   +  + +Y++A+KD   ++ +E
Sbjct: 449 RCIAHLNLKDYQKALKDCSQSIRIE 473



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 5/243 (2%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           ++ AI  F E+IQ NP+   A+  RG A   LG    A++D +K +E  P++ D  ++RG
Sbjct: 221 VQGAIEAFDESIQLNPNNPLAYGNRGIAYDDLGAHQAAVEDYTKLIELAPSNTDAYYQRG 280

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +  +  +D+  AVED +  ++    +  AY + G+A   + +YK A     +AIQL+   
Sbjct: 281 LARYDLEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQYKAAIADLDQAIQLNPQN 340

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            +A+         + N ++A+    Q +  +   +KAY+ RG     L  ++ A+ D + 
Sbjct: 341 AQAYAARGLVLSAMGNQQEAMADYTQAIEYNPNDAKAYYNRGRTRFHLADYRGAVDDYTQ 400

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQ 665
            + IDP++      R      +G YR+AI D   A+    ++   +  +C+A      YQ
Sbjct: 401 AIAIDPTDSMAYTNRCQAKFNLGNYRDAIADCTEAITQNPNNHIAYNNRCIAHLNLKDYQ 460

Query: 666 KEI 668
           K +
Sbjct: 461 KAL 463



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 133/266 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA     +Y +AI+  DQ ++ +P   +A   RG   +     + A++D+T+AI+ NP
Sbjct: 313 RGIANYQLNQYKAAIADLDQAIQLNPQNAQAYAARGLVLSAMGNQQEAMADYTQAIEYNP 372

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  +A+  RG+ R  L +   A+ D ++A+  +P  +     R    F   ++  A+ D 
Sbjct: 373 NDAKAYYNRGRTRFHLADYRGAVDDYTQAIAIDPTDSMAYTNRCQAKFNLGNYRDAIADC 432

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +  +  N  AY    +A  ++ +Y+KA +   ++I+++ ++  A+ +  +  + L +
Sbjct: 433 TEAITQNPNNHIAYNNRCIAHLNLKDYQKALKDCSQSIRIEPSYENAYINRGEIRRKLGD 492

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           ++ ALE   Q + ++   S AY  R  +    G +  A+ D +  + ++P+N      R 
Sbjct: 493 NQGALEDYTQAIRLNPNNSVAYTNRARVRRKFGDNSGALDDYTKAIQLNPNNAFAYSGRG 552

Query: 627 SCYHAIGEYREAIKDYDAALDLELDS 652
             +  +G   EAI D++ A  L LD+
Sbjct: 553 LTHAELGNTMEAINDFEQASKLHLDN 578



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 49  LRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           L +W  A+     L+  +S + Q   +R     QL  +K  I D D+A+QL+P   QAY 
Sbjct: 286 LEDWQGAVEDFTELIQRKSNDDQAYYHRGIANYQLNQYKAAIADLDQAIQLNPQNAQAYA 345

Query: 108 LKGCAFSALGRKEEALSVWEKGYEH 132
            +G   SA+G ++EA++ + +  E+
Sbjct: 346 ARGLVLSAMGNQQEAMADYTQAIEY 370


>gi|384208243|ref|YP_005593963.1| hypothetical protein Bint_0754 [Brachyspira intermedia PWS/A]
 gi|343385893|gb|AEM21383.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 420

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 171/337 (50%), Gaps = 3/337 (0%)

Query: 321 SNTNSESYSKSSISDNKSSDSTESRSK-LSFKWDMLKETSNEAKRNKKFCVTRISKSKSI 379
           +N ++E+YS     ++++    E  +K +S K + +   +N     K+  + R++     
Sbjct: 39  NNIDAENYSDFDDFNDRAKAFNEELNKIMSDKQNFIVSFTNIVDNKKEVDIDRLNNLTDY 98

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
             D+  S+GI +   G+YA AI  +D+ +K +P   +A   +  A+     L+ AI ++ 
Sbjct: 99  H-DYN-SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYD 156

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI+       A+  RG  ++ LG   EAI+D  KAL  +PN  D  + +G++  +    
Sbjct: 157 KAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFS 216

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A++D S  +KL+     AY   G+A  ++G Y++A + + KAI+L+ N+  A+     
Sbjct: 217 KEAIKDFSKAIKLNPNYALAYNNRGIAKDNLGLYEEAIKDYDKAIKLNPNYALAYNSRGN 276

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +L   E+A+E   + + +    + AY+ RG   + L  +++AIKD    + +DP+  
Sbjct: 277 AKDNLGLYEEAIEDFNKAIKLKPDNTDAYNNRGNTKYNLELYEEAIKDYDKAIKLDPNYA 336

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
                R +    +G Y EAI+D+D A+ L+ D  + +
Sbjct: 337 FAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYADAY 373



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 133/269 (49%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D   ++ IA+   G    AI  +D+ ++    Y  A   RG  ++    LE AI DF +
Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDK 191

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+  +P+  +A+  +G     LG S EAI+D SKA++  PN A   + RGI       + 
Sbjct: 192 ALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFSKAIKLNPNYALAYNNRGIAKDNLGLYE 251

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A++D    +KL+     AY   G A  ++G Y++A E   KAI+L  +  +A+ +    
Sbjct: 252 EAIKDYDKAIKLNPNYALAYNSRGNAKDNLGLYEEAIEDFNKAIKLKPDNTDAYNNRGNT 311

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
             +L   E+A++   + + +D  ++ AY+ RG     LG +++AI+D    + + P   +
Sbjct: 312 KYNLELYEEAIKDYDKAIKLDPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDYAD 371

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLE 649
               R      +G Y EA+KDY  AL L+
Sbjct: 372 AYNNRGLTKENLGLYEEALKDYKKALKLD 400



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 11/111 (9%)

Query: 24  DELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDICNRAFC 78
           DE ++++  MA A      A+ +L  L  ++  + KAI +        Y      NR   
Sbjct: 122 DEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY------NRGLL 175

Query: 79  YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
            S L L +  I+D DKAL +DP L  AY  KG     LG  +EA+  + K 
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFSKA 226



 Score = 44.3 bits (103), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +++++SKAI+ L+   A +Y      NR      L L++  I+D DKA++L+P    AY 
Sbjct: 219 AIKDFSKAIK-LNPNYALAYN-----NRGIAKDNLGLYEEAIKDYDKAIKLNPNYALAYN 272

Query: 108 LKGCAFSALGRKEEALSVWEKG 129
            +G A   LG  EEA+  + K 
Sbjct: 273 SRGNAKDNLGLYEEAIEDFNKA 294



 Score = 43.9 bits (102), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           NR      LEL++  I+D DKA++LDP    AY  +G A   LG  EEA+  ++K 
Sbjct: 307 NRGNTKYNLELYEEAIKDYDKAIKLDPNYAFAYNNRGNAKDNLGLYEEAIEDFDKA 362


>gi|189347838|ref|YP_001944367.1| hypothetical protein Clim_2365 [Chlorobium limicola DSM 245]
 gi|189341985|gb|ACD91388.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
           245]
          Length = 308

 Score =  117 bits (292), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 121/261 (46%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI Q  EG    AI  F + L  D     A   RG A++   +++ AI+D+T AI+ NP 
Sbjct: 34  GIEQGREGNVREAIDFFSKALVLDTENAGAYYNRGLAKSLGGDVKGAITDYTRAIELNPK 93

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A   RG ARA+LG+   A++D+SKA+  +P   +  + RG      +DF  A+ D S
Sbjct: 94  LLGAHNNRGFARASLGDFRGAVEDISKAIALDPEVPEFYNNRGTAKSALQDFKGAIADYS 153

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + L+     AY   GLA S  G+ K A      AI+ D+ +  AW +         + 
Sbjct: 154 RSISLNPRLAGAYNNRGLAKSMSGDPKGAISDFSLAIERDQRYDAAWYNRGNARVATGDF 213

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
             A++   + L ++    +AY+ R      LG  + A+ DL+  L + P N E  Y R  
Sbjct: 214 NGAVQDYNKALILNAELVEAYNNRAYAKAALGDFQGAVDDLTRLLQVRPDNPEAYYNRGI 273

Query: 628 CYHAIGEYREAIKDYDAALDL 648
               +G+   AI D   A  L
Sbjct: 274 AKKQLGDISGAIGDLQKAATL 294



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 61/223 (27%), Positives = 110/223 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+   G    AI+ + + ++ +P    A   RG ARA   +   A+ D ++AI  +
Sbjct: 66  NRGLAKSLGGDVKGAITDYTRAIELNPKLLGAHNNRGFARASLGDFRGAVEDISKAIALD 125

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E +  RG A++AL +   AI D S+++   P  A   + RG+      D   A+ D
Sbjct: 126 PEVPEFYNNRGTAKSALQDFKGAIADYSRSISLNPRLAGAYNNRGLAKSMSGDPKGAISD 185

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  ++ D+   +A+   G A  + G++  A + + KA+ L+   +EA+ +       L 
Sbjct: 186 FSLAIERDQRYDAAWYNRGNARVATGDFNGAVQDYNKALILNAELVEAYNNRAYAKAALG 245

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           + + A++ L ++L +     +AY+ RG+    LG    AI DL
Sbjct: 246 DFQGAVDDLTRLLQVRPDNPEAYYNRGIAKKQLGDISGAIGDL 288



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 54/200 (27%), Positives = 99/200 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ + G +  A+    + +  DP  PE    RGTA++  ++ + AI+D++ +I  N
Sbjct: 100 NRGFARASLGDFRGAVEDISKAIALDPEVPEFYNNRGTAKSALQDFKGAIADYSRSISLN 159

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A++  G+   AI D S A+E +       + RG       DFN AV+D
Sbjct: 160 PRLAGAYNNRGLAKSMSGDPKGAISDFSLAIERDQRYDAAWYNRGNARVATGDFNGAVQD 219

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + L+ E   AY     A +++G+++ A +   + +Q+  +  EA+ +     + L 
Sbjct: 220 YNKALILNAELVEAYNNRAYAKAALGDFQGAVDDLTRLLQVRPDNPEAYYNRGIAKKQLG 279

Query: 566 NSEKALECLQQVLYIDKRFS 585
           +   A+  LQ+   +  R S
Sbjct: 280 DISGAIGDLQKAATLGDRLS 299



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 63/254 (24%), Positives = 113/254 (44%), Gaps = 7/254 (2%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E  I  G  +  +  +  AI  F++A+  +     A+  RG A++  G+   AI D ++A
Sbjct: 28  EEYIEFGIEQGREGNVREAIDFFSKALVLDTENAGAYYNRGLAKSLGGDVKGAITDYTRA 87

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           +E  P      + RG       DF  AVED+S  + LD E    Y   G A S++ ++K 
Sbjct: 88  IELNPKLLGAHNNRGFARASLGDFRGAVEDISKAIALDPEVPEFYNNRGTAKSALQDFKG 147

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A   + ++I L+     A+ +         + + A+      +  D+R+  A++ RG   
Sbjct: 148 AIADYSRSISLNPRLAGAYNNRGLAKSMSGDPKGAISDFSLAIERDQRYDAAWYNRGNAR 207

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
              G    A++D +  L ++   +E    RA    A+G+++ A+ D    L +  D+ E 
Sbjct: 208 VATGDFNGAVQDYNKALILNAELVEAYNNRAYAKAALGDFQGAVDDLTRLLQVRPDNPE- 266

Query: 656 FVLQCLAFYQKEIA 669
                 A+Y + IA
Sbjct: 267 ------AYYNRGIA 274



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 5/166 (3%)

Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           SK+I++D     F  +RG A+     +  AI+ + + +  +P    A   RG A++   +
Sbjct: 119 SKAIALDPEVPEFYNNRGTAKSALQDFKGAIADYSRSISLNPRLAGAYNNRGLAKSMSGD 178

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AISDF+ AI+ +     AW  RG AR A G+   A+QD +KAL       +  + R 
Sbjct: 179 PKGAISDFSLAIERDQRYDAAWYNRGNARVATGDFNGAVQDYNKALILNAELVEAYNNRA 238

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
                  DF  AV+DL+  +++  +N  AY   G+A   +G+   A
Sbjct: 239 YAKAALGDFQGAVDDLTRLLQVRPDNPEAYYNRGIAKKQLGDISGA 284


>gi|428317098|ref|YP_007114980.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
           7112]
 gi|428240778|gb|AFZ06564.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
           7112]
          Length = 732

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 135/271 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+++ G    A+  F Q+++ +P   EA   RG A     +   AI D+T+AI+ +
Sbjct: 415 NRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLS 474

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +A+  RG AR+A G+   A+ D ++AL+  P  A + + RG   F   D+  A+ED
Sbjct: 475 PNDAKAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADYQGAMED 534

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L  +   AYT    A  ++  Y KA     + I+LD     A+ +    Y +L 
Sbjct: 535 YTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLK 594

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             +KA E     + ++    KAY  RGL     G  + A++D +  + ++PS+      R
Sbjct: 595 QFQKASEDCSLTIGLNGNNPKAYSNRGLARSASGDKQGALEDFTQAIRLNPSDAVAYSNR 654

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            + Y  +  Y  A++D+  +L L  ++   F
Sbjct: 655 GTIYSELKNYPLAVEDFAHSLRLNPNNASAF 685



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 134/262 (51%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R  A+ + G    AI  + Q +K +P + +AL  RG AR    +   A+ DFT+ ++ NP
Sbjct: 382 RANARYDTGATEQAIEDYTQAIKVNPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNP 441

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S GEA+ +RG A   LG+   AI+D ++A+   PN A     RG+      D   A+ D 
Sbjct: 442 SDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADF 501

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +++  +    Y   G A  ++ +Y+ A E + KAI+L  +  +A+ +    Y +LA 
Sbjct: 502 TQALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLAT 561

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            +KA+    + + +D +   AY+ R +    L Q +KA +D S  +G++ +N +    R 
Sbjct: 562 YDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRG 621

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
               A G+ + A++D+  A+ L
Sbjct: 622 LARSASGDKQGALEDFTQAIRL 643



 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 125/254 (49%)

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
           ++P   +  + RG  +A Q +   AI+D+T+AI  N S  E++ +R  AR   G + +AI
Sbjct: 337 QNPARSKEWLARGVTKAQQGDTTGAIADYTQAIALNASDAESYYKRANARYDTGATEQAI 396

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
           +D ++A++  P+    L+ RG+      D   AVED +  V+L+  +  AY+  GLA   
Sbjct: 397 EDYTQAIKVNPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYD 456

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +G+Y+ A E + +AI+L  N  +A+ +         +   A+    Q L I  + +  Y+
Sbjct: 457 LGDYRTAIEDYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYY 516

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            RG     L  ++ A++D +  + + P   +    R S Y  +  Y +AI D    + L+
Sbjct: 517 SRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLD 576

Query: 650 LDSMEKFVLQCLAF 663
                 +  +C+A+
Sbjct: 577 PKDEAAYNNRCVAY 590



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 133/265 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  + G Y +AI  + Q ++  P   +A   RG AR+   +   A++DFT+A+Q +P
Sbjct: 450 RGLAYYDLGDYRTAIEDYTQAIRLSPNDAKAYSNRGLARSAAGDKTGAMADFTQALQISP 509

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG+AR  L +   A++D +KA+E +P+ AD    R         ++ A+ D 
Sbjct: 510 KQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADC 569

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++LD ++++AY    +A  ++ +++KA E     I L+ N  +A+ +         +
Sbjct: 570 TEGIRLDPKDEAAYNNRCVAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRGLARSASGD 629

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + ALE   Q + ++   + AY  RG +   L  +  A++D +  L ++P+N    Y R 
Sbjct: 630 KQGALEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHSLRLNPNNASAFYSRG 689

Query: 627 SCYHAIGEYREAIKDYDAALDLELD 651
                + +   AI+D+  A  L L+
Sbjct: 690 LVRRQLKDRTGAIEDFQKAATLFLE 714



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 105/223 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+   G    A++ F Q L+  P        RG AR    + + A+ D+T+AI+  
Sbjct: 483 NRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQ 542

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  R  A   L    +AI D ++ +  +P      + R +     K F  A ED
Sbjct: 543 PDLADAYTNRCSAYLNLATYDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLKQFQKASED 602

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  + L+  N  AY+  GLA S+ G+ + A E   +AI+L+ +   A+ +    Y +L 
Sbjct: 603 CSLTIGLNGNNPKAYSNRGLARSASGDKQGALEDFTQAIRLNPSDAVAYSNRGTIYSELK 662

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N   A+E     L ++   + A++ RGL+   L     AI+D 
Sbjct: 663 NYPLAVEDFAHSLRLNPNNASAFYSRGLVRRQLKDRTGAIEDF 705



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 3/172 (1%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D   +R  A +N   Y  AI+   + ++ DP    A   R  A    ++ + A  D + 
Sbjct: 546 ADAYTNRCSAYLNLATYDKAIADCTEGIRLDPKDEAAYNNRCVAYLNLKQFQKASEDCSL 605

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            I  N +  +A+  RG AR+A G+   A++D ++A+   P+ A     RG +  + K++ 
Sbjct: 606 TIGLNGNNPKAYSNRGLARSASGDKQGALEDFTQAIRLNPSDAVAYSNRGTIYSELKNYP 665

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
            AVED +  ++L+  N SA+   GL    + +   A E   KA  L   FLE
Sbjct: 666 LAVEDFAHSLRLNPNNASAFYSRGLVRRQLKDRTGAIEDFQKAATL---FLE 714



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 47/89 (52%)

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           Q + ++   +++Y+ R    +  G  ++AI+D +  + ++PS+ + LY R      IG+ 
Sbjct: 367 QAIALNASDAESYYKRANARYDTGATEQAIEDYTQAIKVNPSHTKALYNRGMARLDIGDK 426

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFY 664
           R A++D+   + L     E +  + LA+Y
Sbjct: 427 RGAVEDFTQVVRLNPSDGEAYSQRGLAYY 455


>gi|384208241|ref|YP_005593961.1| hypothetical protein Bint_0752 [Brachyspira intermedia PWS/A]
 gi|343385891|gb|AEM21381.1| hypothetical protein Bint_0752 [Brachyspira intermedia PWS/A]
          Length = 617

 Score =  117 bits (292), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 144/267 (53%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG+A+ + G +  AI  ++++++ D    +A   RG ++ + +  + A+ DF + 
Sbjct: 194 DAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGASKNYLQLFDEAMKDFNKI 253

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++  P+   A+  RG ++  LG   EAI+D +KAL+  PN AD  + RG    +   F  
Sbjct: 254 LELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKALKINPNFADAYYNRGNSKKELGLFKE 313

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ED +  +K    + ++Y   G     +  Y++A + + K I+LD N+++A+ +     
Sbjct: 314 AIEDYNNAIKWKPNDINSYMNRGNVKYDLELYEEAIKDYDKIIKLDHNYVDAYYNRANAK 373

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           ++L   +++++   + +Y++  +S AY+ RGL    LG +++AIKD    + +   N E 
Sbjct: 374 RELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEA 433

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
            Y   S  + +   +E+IK YD A++L
Sbjct: 434 YYNIGSAKYDLDLLKESIKYYDKAIEL 460



 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 135/269 (50%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D   +RG ++   G +  AI  ++  +K  P    + + RG  +      E AI D+ +
Sbjct: 295 ADAYYNRGNSKKELGLFKEAIEDYNNAIKWKPNDINSYMNRGNVKYDLELYEEAIKDYDK 354

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            I+ + +  +A+  R  A+  LG   E+I+D  KA+   PN +D  + RG+       + 
Sbjct: 355 IIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGLAKSDLGMYE 414

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A++D    + L  +N  AY  +G A   +   K++ + + KAI+L   + EA+ +    
Sbjct: 415 EAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYSEAYNNRGLS 474

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
             DL   ++A++   + + ++   S  Y+ RGL  + LG +K+AIKD +  + + P+   
Sbjct: 475 KNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYTLGLYKEAIKDYTKAIELTPNYTN 534

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLE 649
               R S    +G+Y+EAIKDYD A++LE
Sbjct: 535 AYGNRGSAKDELGQYKEAIKDYDKAIELE 563



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 7/320 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+ N G +  AI  +D+ ++    Y +A   RG A+      + AI D+ + I+ +
Sbjct: 164 NRGLARNNLGFFKKAIKDYDKAIELSKNYKDAYYNRGVAKNHAGLHKEAIEDYNKVIELD 223

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               +A+  RG ++  L    EA++D +K LE EPN+      RG        +  A+ED
Sbjct: 224 NKNIDAYNNRGASKNYLQLFDEAMKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIED 283

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K++     AY   G +   +G +K+A E +  AI+   N + ++ +      DL 
Sbjct: 284 YNKALKINPNFADAYYNRGNSKKELGLFKEAIEDYNNAIKWKPNDINSYMNRGNVKYDLE 343

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A++   +++ +D  +  AY+ R      LG +K++IKD    + ++P+  +    R
Sbjct: 344 LYEEAIKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNR 403

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                 +G Y EAIKDY+ ++DL  D+ E       A+Y    A Y    +     ++D 
Sbjct: 404 GLAKSDLGMYEEAIKDYEESIDLCADNPE-------AYYNIGSAKYDLDLLKESIKYYDK 456

Query: 686 DGDIDPLFKEYWCKRLHPKN 705
             ++ P + E +  R   KN
Sbjct: 457 AIELRPTYSEAYNNRGLSKN 476



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 149/303 (49%), Gaps = 34/303 (11%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           ++D   +RG ++     +  A+  F++IL+ +P    A   RG ++      + AI D+ 
Sbjct: 226 NIDAYNNRGASKNYLQLFDEAMKDFNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYN 285

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +A++ NP+  +A+  RG ++  LG   EAI+D + A++++PN  +    RG V +  + +
Sbjct: 286 KALKINPNFADAYYNRGNSKKELGLFKEAIEDYNNAIKWKPNDINSYMNRGNVKYDLELY 345

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A++D    +KLD     AY     A   +G YK++ + + KAI L+ N+ +A+ +   
Sbjct: 346 EEAIKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRGL 405

Query: 560 FYQDLANSEKALECLQQ----------------------------VLYIDK------RFS 585
              DL   E+A++  ++                            + Y DK       +S
Sbjct: 406 AKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKESIKYYDKAIELRPTYS 465

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           +AY+ RGL  + LG +K+AIKD    + ++P++      R    + +G Y+EAIKDY  A
Sbjct: 466 EAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTKYTLGLYKEAIKDYTKA 525

Query: 646 LDL 648
           ++L
Sbjct: 526 IEL 528



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 147/291 (50%), Gaps = 12/291 (4%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---EAAISDFTEA 441
           ++RG  + +   Y  AI  +D+I+K D  Y +A   R  A+   REL   + +I D+ +A
Sbjct: 333 MNRGNVKYDLELYEEAIKDYDKIIKLDHNYVDAYYNRANAK---RELGLYKESIKDYDKA 389

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I  NP+  +A+  RG A++ LG   EAI+D  ++++   ++ +  +  G   +       
Sbjct: 390 IYLNPNYSDAYNNRGLAKSDLGMYEEAIKDYEESIDLCADNPEAYYNIGSAKYDLDLLKE 449

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQ 559
           +++     ++L      AY   GL+ + +G YK+A + + K+I+L+ N    + +  LT+
Sbjct: 450 SIKYYDKAIELRPTYSEAYNNRGLSKNDLGLYKEAIKDYDKSIELNPNDSNTYNNRGLTK 509

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           +   L   ++A++   + + +   ++ AY  RG     LGQ+K+AIKD    + ++P+  
Sbjct: 510 Y--TLGLYKEAIKDYTKAIELTPNYTNAYGNRGSAKDELGQYKEAIKDYDKAIELEPNTA 567

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
                R       G Y+EA+KDY  A  LELD   K+ +  +   +KE  L
Sbjct: 568 YLYNDRGWVKKNAGLYKEALKDYKKA--LELDPNNKYAMSNIENLKKEHGL 616



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 136/289 (47%), Gaps = 36/289 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           + G+A  N G Y  AI  + + +     Y  A   RG AR      + AI D+ +AI+ +
Sbjct: 130 TNGVALNNMGSYQYAIDKYSEAIDLIDYYALAYYNRGLARNNLGFFKKAIKDYDKAIELS 189

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  +A+  RG A+   G   EAI+D +K +E +  + D  + RG      + F+ A++D
Sbjct: 190 KNYKDAYYNRGVAKNHAGLHKEAIEDYNKVIELDNKNIDAYNNRGASKNYLQLFDEAMKD 249

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+  N  AY+  G + + +G YK+A E + KA++++ N                
Sbjct: 250 FNKILELEPNNYCAYSNRGNSKNDLGLYKEAIEDYNKALKINPN---------------- 293

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
                             F+ AY+ RG     LG  K+AI+D ++ +   P++I     R
Sbjct: 294 ------------------FADAYYNRGNSKKELGLFKEAIEDYNNAIKWKPNDINSYMNR 335

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTAS 674
            +  + +  Y EAIKDYD  + L+ + ++ +  +  A  ++E+ LY  S
Sbjct: 336 GNVKYDLELYEEAIKDYDKIIKLDHNYVDAYYNRANA--KRELGLYKES 382



 Score = 47.4 bits (111), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 5/89 (5%)

Query: 52  WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
           + +AI+  D ++   +   D   NRA    +L L+K  I+D DKA+ L+P    AY  +G
Sbjct: 345 YEEAIKDYDKIIKLDHNYVDAYYNRANAKRELGLYKESIKDYDKAIYLNPNYSDAYNNRG 404

Query: 111 CAFSALGRKEEALSVWEKGYEHALHQSAD 139
            A S LG  EEA+    K YE ++   AD
Sbjct: 405 LAKSDLGMYEEAI----KDYEESIDLCAD 429


>gi|209527262|ref|ZP_03275773.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209492329|gb|EDZ92673.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 501

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 1/267 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A    G+Y  AIS +DQ LK  P   +A   RG A     + E A+S + +A++  
Sbjct: 199 NRGVALSYSGEYKQAISSYDQALKYKPDLHKAWFSRGNALYHLGKYEQALSSYDQALKYK 258

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG+A + LGE  +A+    +AL+++P+  +    RG   +   ++  A+  
Sbjct: 259 PDLHKAWFNRGKALSDLGEYKQALSSYDEALKYKPDFHEPWFSRGNALYHLGEYKQALSS 318

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQDL 564
               +K   +   A+   G AL  +GEYK+A  ++ +A++  + ++ E W         L
Sbjct: 319 YDQALKYKPDLHKAWFSRGNALYHLGEYKQALSSYDQALKYKKPDYHEPWFSRGNALYHL 378

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+    Q L        A+  RG  L  LG++K+AI      L   P +    Y 
Sbjct: 379 GEYKQAISSYDQALTYKPDDHVAWFNRGNALSYLGEYKQAISSYDEALKYKPDDHVAWYN 438

Query: 625 RASCYHAIGEYREAIKDYDAALDLELD 651
           R +  + +GEY++AI  YD AL  + D
Sbjct: 439 RGNALYHLGEYKQAISSYDQALKYKPD 465



 Score =  111 bits (277), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 128/270 (47%), Gaps = 1/270 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            SRG A  + GKY  A+S +DQ LK  P   +A   RG A +   E + A+S + EA++ 
Sbjct: 232 FSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYDEALKY 291

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   E W  RG A   LGE  +A+    +AL+++P+       RG   +   ++  A+ 
Sbjct: 292 KPDFHEPWFSRGNALYHLGEYKQALSSYDQALKYKPDLHKAWFSRGNALYHLGEYKQALS 351

Query: 505 DLSACVKLDKEN-KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                +K  K +    +   G AL  +GEYK+A  ++ +A+    +   AW +       
Sbjct: 352 SYDQALKYKKPDYHEPWFSRGNALYHLGEYKQAISSYDQALTYKPDDHVAWFNRGNALSY 411

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   ++A+    + L        A++ RG  L+ LG++K+AI      L   P +    Y
Sbjct: 412 LGEYKQAISSYDEALKYKPDDHVAWYNRGNALYHLGEYKQAISSYDQALKYKPDDHVAWY 471

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSM 653
            R +    +GEY++AI  YD AL++   +M
Sbjct: 472 NRGNALSDLGEYKQAISSYDEALNINRMTM 501



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 139/291 (47%), Gaps = 20/291 (6%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ + + G    AIS +++ ++  P   +A   RG A ++  E + AIS + +A++  P 
Sbjct: 167 GLQRYDNGDVRGAISSWEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISSYDQALKYKPD 226

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +AW  RG A   LG+  +A+    +AL+++P+       RG       ++  A+    
Sbjct: 227 LHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYD 286

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQF 560
             +K   +    +   G AL  +GEYK+A  ++ +A++   +  +AW        HL ++
Sbjct: 287 EALKYKPDFHEPWFSRGNALYHLGEYKQALSSYDQALKYKPDLHKAWFSRGNALYHLGEY 346

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            Q L++ ++AL+      Y    + + +  RG  L+ LG++K+AI      L   P +  
Sbjct: 347 KQALSSYDQALK------YKKPDYHEPWFSRGNALYHLGEYKQAISSYDQALTYKPDDHV 400

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
             + R +    +GEY++AI  YD AL  + D         +A+Y +  ALY
Sbjct: 401 AWFNRGNALSYLGEYKQAISSYDEALKYKPDDH-------VAWYNRGNALY 444



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 9/272 (3%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G  R    ++  AIS + +AI+  P   +AW  RG A +  GE  +AI    +AL+++P+
Sbjct: 167 GLQRYDNGDVRGAISSWEKAIEFQPDDHKAWYNRGVALSYSGEYKQAISSYDQALKYKPD 226

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
                  RG   +    +  A+      +K   +   A+   G ALS +GEYK+A  ++ 
Sbjct: 227 LHKAWFSRGNALYHLGKYEQALSSYDQALKYKPDLHKAWFNRGKALSDLGEYKQALSSYD 286

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +A++   +F E W         L   ++AL    Q L       KA+  RG  L+ LG++
Sbjct: 287 EALKYKPDFHEPWFSRGNALYHLGEYKQALSSYDQALKYKPDLHKAWFSRGNALYHLGEY 346

Query: 602 KKAIKDLSSGLGI-DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV--- 657
           K+A+      L    P   E  + R +  + +GEY++AI  YD AL  + D    +    
Sbjct: 347 KQALSSYDQALKYKKPDYHEPWFSRGNALYHLGEYKQAISSYDQALTYKPDDHVAWFNRG 406

Query: 658 --LQCLAFYQKEIALYTAS---KINSEFCWFD 684
             L  L  Y++ I+ Y  +   K +    W++
Sbjct: 407 NALSYLGEYKQAISSYDEALKYKPDDHVAWYN 438


>gi|434389920|ref|YP_007100354.1| hypothetical protein Cha6605_6437 [Chamaesiphon minutus PCC 6605]
 gi|428021916|gb|AFY97252.1| hypothetical protein Cha6605_6437 [Chamaesiphon minutus PCC 6605]
          Length = 1126

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 149/306 (48%), Gaps = 14/306 (4%)

Query: 370 VTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           +    ++  I+ +F      +GI   N G++  A+S F++ ++ +P + +A   RG +  
Sbjct: 145 IASFERAIEIAPNFHAGWYGQGIELDNLGRFEDAVSNFNRAIEIEPNFYQAWFKRGFSLG 204

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
              + E A+S+F  A++  P+   +W  RG A   +G   +AI    +A+E + +  +I 
Sbjct: 205 NLNKFEEAVSNFNRAVEIEPNHSPSWHCRGLALGQIGRYEDAIYSFERAIEIDSDEPEIW 264

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            +RG        +  A+      + +   + + +   G+ L  I +Y++AE +  +AIQ+
Sbjct: 265 RDRGFAQINLDRYEEAIFSYERYLNIQINDCNIWFLRGVLLKYIDKYEEAETSLDRAIQI 324

Query: 547 DRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           + +F EAW    L  F+  LA ++ ++    + + ++    +A+  +GL L  +GQ+K A
Sbjct: 325 NPDFFEAWCERGLVCFF--LARNQDSIASYDRAIELNADLHEAWFGKGLTLKTIGQYKNA 382

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
           I      + I P   E    R S   AI +Y+EAI +YD A+++  D         L +Y
Sbjct: 383 IASYDRAIEIKPDYYEAWSNRGSALEAISKYKEAIANYDRAIEINPDFH-------LVWY 435

Query: 665 QKEIAL 670
            + I+L
Sbjct: 436 NRGISL 441



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 142/316 (44%), Gaps = 7/316 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            SRG      G+Y   I+ + Q +K  P Y +    +G A  +  + E +I+ F  AI+ 
Sbjct: 95  FSRGYNLFGLGRYEEEIANYKQAIKIYPDYFQPWYYQGIALGYLGQTEESIASFERAIEI 154

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P+    W  +G     LG   +A+ + ++A+E EPN      +RG        F  AV 
Sbjct: 155 APNFHAGWYGQGIELDNLGRFEDAVSNFNRAIEIEPNFYQAWFKRGFSLGNLNKFEEAVS 214

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           + +  V+++  +  ++   GLAL  IG Y+ A  +  +AI++D +  E W        +L
Sbjct: 215 NFNRAVEIEPNHSPSWHCRGLALGQIGRYEDAIYSFERAIEIDSDEPEIWRDRGFAQINL 274

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+A+   ++ L I       + LRG+LL  + ++++A   L   + I+P   E    
Sbjct: 275 DRYEEAIFSYERYLNIQINDCNIWFLRGVLLKYIDKYEEAETSLDRAIQINPDFFEAWCE 334

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           R      +   +++I  YD A++L  D  E       A++ K + L T  +  +    +D
Sbjct: 335 RGLVCFFLARNQDSIASYDRAIELNADLHE-------AWFGKGLTLKTIGQYKNAIASYD 387

Query: 685 IDGDIDPLFKEYWCKR 700
              +I P + E W  R
Sbjct: 388 RAIEIKPDYYEAWSNR 403



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 144/300 (48%), Gaps = 19/300 (6%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A    G+Y  AI  F++ ++ D   PE    RG A+      E AI  +   +    
Sbjct: 233 RGLALGQIGRYEDAIYSFERAIEIDSDEPEIWRDRGFAQINLDRYEEAIFSYERYLNIQI 292

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +    W  RG     + +  EA   L +A++  P+  +   ERG+V F       ++   
Sbjct: 293 NDCNIWFLRGVLLKYIDKYEEAETSLDRAIQINPDFFEAWCERGLVCFFLARNQDSIASY 352

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQ 559
              ++L+ +   A+   GL L +IG+YK A  ++ +AI++  ++ EAW +       +++
Sbjct: 353 DRAIELNADLHEAWFGKGLTLKTIGQYKNAIASYDRAIEIKPDYYEAWSNRGSALEAISK 412

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           + + +AN ++A+E       I+  F   ++ RG+ L  LGQ+ +AI +    + + P + 
Sbjct: 413 YKEAIANYDRAIE-------INPDFHLVWYNRGISLEHLGQYSEAIPNFERAIKLKPDDY 465

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTAS 674
           + L+        +G Y+EAI +   A++++ D  + +     VL+ L  Y++ IA Y  S
Sbjct: 466 QSLFRLGVALDNLGWYKEAIINLTLAIEIKPDFSDAWCSLGVVLENLGQYKEAIASYEQS 525



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 121/280 (43%), Gaps = 38/280 (13%)

Query: 371 TRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           T + ++  I+ DF      RG+      +   +I+ +D+ ++ +    EA  G+G     
Sbjct: 316 TSLDRAIQINPDFFEAWCERGLVCFFLARNQDSIASYDRAIELNADLHEAWFGKGLTLKT 375

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
             + + AI+ +  AI+  P   EAW  RG A  A+ +  EAI +  +A+E  P+   + +
Sbjct: 376 IGQYKNAIASYDRAIEIKPDYYEAWSNRGSALEAISKYKEAIANYDRAIEINPDFHLVWY 435

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RGI       ++ A+ +    +KL  ++  +   LG+AL ++G YK+A      AI++ 
Sbjct: 436 NRGISLEHLGQYSEAIPNFERAIKLKPDDYQSLFRLGVALDNLGWYKEAIINLTLAIEIK 495

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +F +AW  L                                  G++L  LGQ+K+AI  
Sbjct: 496 PDFSDAWCSL----------------------------------GVVLENLGQYKEAIAS 521

Query: 608 LSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDYDAAL 646
               + + P N+  ++  R + Y     Y+  I  Y  AL
Sbjct: 522 YEQSIKLKPDNLYQVWANRGAAYGRFKGYQSQINAYYQAL 561



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 26/292 (8%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E L G G     Q EL         + +S     E W  RG     LG   E I +  +A
Sbjct: 63  EGLAGLG-----QGELAETAGQLIRSWESEIDDAETWFSRGYNLFGLGRYEEEIANYKQA 117

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           ++  P+     + +GI          ++      +++     + +   G+ L ++G ++ 
Sbjct: 118 IKIYPDYFQPWYYQGIALGYLGQTEESIASFERAIEIAPNFHAGWYGQGIELDNLGRFED 177

Query: 536 AEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           A     +AI+++ NF +AW       G+L +F + ++N  +A+E       I+   S ++
Sbjct: 178 AVSNFNRAIEIEPNFYQAWFKRGFSLGNLNKFEEAVSNFNRAVE-------IEPNHSPSW 230

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           H RGL L  +G+++ AI      + ID    E    R      +  Y EAI  Y+  L++
Sbjct: 231 HCRGLALGQIGRYEDAIYSFERAIEIDSDEPEIWRDRGFAQINLDRYEEAIFSYERYLNI 290

Query: 649 ELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           +++        C  ++ + + L    K        D    I+P F E WC+R
Sbjct: 291 QIND-------CNIWFLRGVLLKYIDKYEEAETSLDRAIQINPDFFEAWCER 335



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 1/161 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A     KY  AI+ +D+ ++ +P +      RG +     +   AI +F  AI+  
Sbjct: 402 NRGSALEAISKYKEAIANYDRAIEINPDFHLVWYNRGISLEHLGQYSEAIPNFERAIKLK 461

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   ++  R G A   LG   EAI +L+ A+E +P+ +D     G+V      +  A+  
Sbjct: 462 PDDYQSLFRLGVALDNLGWYKEAIINLTLAIEIKPDFSDAWCSLGVVLENLGQYKEAIAS 521

Query: 506 LSACVKLDKEN-KSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
               +KL  +N    +   G A      Y+    A+ +A+Q
Sbjct: 522 YEQSIKLKPDNLYQVWANRGAAYGRFKGYQSQINAYYQALQ 562


>gi|427421749|ref|ZP_18911932.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
 gi|425757626|gb|EKU98480.1| TPR repeat-containing protein [Leptolyngbya sp. PCC 7375]
          Length = 1303

 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 146/291 (50%), Gaps = 5/291 (1%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG +  N G+Y  AI+ +D+ ++ +P    A   RG + A     + AI+ + +A++ N
Sbjct: 775  NRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAWYSRGNSLANLGRYQEAIASYDQAVEVN 834

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    AW  RG + A+LG   EAI    KA+E +P+  +  + RG        +  A+  
Sbjct: 835  PDDHLAWYNRGISLASLGHYQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIAS 894

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                V+++ +N SA+   G +L+S+G Y++A  ++ KA++L  +   AW +      +L 
Sbjct: 895  YDQAVEVNPDNHSAWYNRGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLG 954

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              ++A+    + + +      A++ RG  LH LG++++AI   +  + + P   E    +
Sbjct: 955  RYQEAITSYNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQ 1014

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
             S    +G Y EAI  YD A++L+ D    +      L+ L  Y++ IA Y
Sbjct: 1015 GSSLANLGRYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASY 1065



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 146/291 (50%), Gaps = 5/291 (1%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG + VN G+Y  AI+ +D+ ++ +P    A   RG +       E AI+ + +A++ N
Sbjct: 741  NRGNSLVNLGRYEEAIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEVN 800

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    AW  RG + A LG   EAI    +A+E  P+     + RGI       +  A+  
Sbjct: 801  PDNHSAWYSRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGHYQEAIAS 860

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                V+L  ++ +++   G +L+++G Y++A  ++ +A++++ +   AW +       L 
Sbjct: 861  YDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLG 920

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            + ++A+    + + +      A++ RG  LH LG++++AI   +  + + P N      R
Sbjct: 921  HYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNNR 980

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
             S  H +G Y+EAI  Y+ A++L+ D  E +      L  L  Y++ IA Y
Sbjct: 981  GSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYEEAIASY 1031



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 136/266 (51%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RGI+  + G Y  AI+ +D+ ++  P    +   RG + A     E AI+ + +A++ N
Sbjct: 843  NRGISLASLGHYQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVN 902

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    AW  RG + A+LG   EAI    KA+E +P++    + RG        +  A+  
Sbjct: 903  PDNHSAWYNRGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITS 962

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  V+L  +N  A+   G +L ++G Y++A  ++ KA++L  +  EAW +      +L 
Sbjct: 963  YNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLG 1022

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              E+A+    + + +      A++ RG  L  LG++++AI      + I P + + L  R
Sbjct: 1023 RYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAVDIKPDDHKALANR 1082

Query: 626  ASCYHAIGEYREAIKDYDAALDLELD 651
               +  +G++++A+ D + A+DL+ D
Sbjct: 1083 GDIHRRLGQHQQALADLNHAIDLKPD 1108



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 8/324 (2%)

Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDP 412
           K T+ E  R  K  +   +K+  I  D  L   ++G+     G+   AI+ +D  +  +P
Sbjct: 674 KGTALEKLRKYKEALISHNKALEIKPDDALGWYNKGVQLGQLGRDEEAIASYDNAVNINP 733

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
               +   RG +       E AI+ + +A++ NP+   AW  RG +   LG   EAI   
Sbjct: 734 NDHNSWNNRGNSLVNLGRYEEAIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASY 793

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            KA+E  P++    + RG        +  A+      V+++ ++  A+   G++L+S+G 
Sbjct: 794 DKAVEVNPDNHSAWYSRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGH 853

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           Y++A  ++ KA++L  +   +W +      +L   E+A+    Q + ++     A++ RG
Sbjct: 854 YQEAIASYDKAVELKPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRG 913

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
             L  LG +++AI      + + P N      R S  H +G Y+EAI  Y+ A++L+ D+
Sbjct: 914 NSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDN 973

Query: 653 MEKF-----VLQCLAFYQKEIALY 671
              +      L  L  YQ+ I  Y
Sbjct: 974 HLAWNNRGSSLHNLGRYQEAITSY 997



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 132/266 (49%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG +  N G+Y  AI+ +DQ ++ +P    A   RG + A     + AI+ + +A++  
Sbjct: 877  NRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLGHYQEAIASYDKAVELK 936

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    AW  RG +   LG   EAI   +KA+E +P++    + RG        +  A+  
Sbjct: 937  PDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNNRGSSLHNLGRYQEAITS 996

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  V+L  +   A+   G +L+++G Y++A  ++ KA++L  +   AW +     ++L 
Sbjct: 997  YNKAVELKPDKHEAWNNQGSSLANLGRYEEAIASYDKAVELKPDDHLAWNNRGNSLKNLG 1056

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              E+A+    + + I     KA   RG +   LGQH++A+ DL+  + + P     +  R
Sbjct: 1057 RYEEAIASYDKAVDIKPDDHKALANRGDIHRRLGQHQQALADLNHAIDLKPDYAWAIATR 1116

Query: 626  ASCYHAIGEYREAIKDYDAALDLELD 651
               Y  + +Y  A++D D  ++++ D
Sbjct: 1117 GQTYAQLQQYETALEDLDRTIEIDPD 1142



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 9/316 (2%)

Query: 376 SKSISVDFRLSR-GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           S    VD  L + G++  N G Y  AI+ +D+ L  +P    A IG+GTA    R+ + A
Sbjct: 628 SPDFVVDLYLWKLGLSLHNLGHYVEAIASYDKALNINPDDHNAWIGKGTALEKLRKYKEA 687

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           +    +A++  P     W  +G     LG   EAI     A+   PN  +  + RG    
Sbjct: 688 LISHNKALEIKPDDALGWYNKGVQLGQLGRDEEAIASYDNAVNINPNDHNSWNNRGNSLV 747

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+      V+++  + +A+   G +L+++G Y++A  ++ KA++++ +   AW
Sbjct: 748 NLGRYEEAIASYDKAVEVNPNDHNAWNNRGNSLTNLGRYEEAIASYDKAVEVNPDNHSAW 807

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                   +L   ++A+    Q + ++     A++ RG+ L  LG +++AI      + +
Sbjct: 808 YSRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGHYQEAIASYDKAVEL 867

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIA 669
            P +      R +    +G Y EAI  YD A+++  D+   +      L  L  YQ+ IA
Sbjct: 868 KPDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLGHYQEAIA 927

Query: 670 LYTAS---KINSEFCW 682
            Y  +   K ++   W
Sbjct: 928 SYDKAVELKPDNHLAW 943



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/303 (24%), Positives = 144/303 (47%), Gaps = 6/303 (1%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            SRG +  N G+Y  AI+ +DQ ++ +P    A   RG + A     + AI+ + +A++  
Sbjct: 809  SRGNSLANLGRYQEAIASYDQAVEVNPDDHLAWYNRGISLASLGHYQEAIASYDKAVELK 868

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    +W  RG + A LG   EAI    +A+E  P++    + RG        +  A+  
Sbjct: 869  PDDHNSWNNRGNSLANLGRYEEAIASYDQAVEVNPDNHSAWYNRGNSLASLGHYQEAIAS 928

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                V+L  +N  A+   G +L ++G Y++A  ++ KA++L  +   AW +      +L 
Sbjct: 929  YDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDNHLAWNNRGSSLHNLG 988

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              ++A+    + + +     +A++ +G  L  LG++++AI      + + P +      R
Sbjct: 989  RYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYEEAIASYDKAVELKPDDHLAWNNR 1048

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIA-LYTASKINSE 679
             +    +G Y EAI  YD A+D++ D  +       + + L  +Q+ +A L  A  +  +
Sbjct: 1049 GNSLKNLGRYEEAIASYDKAVDIKPDDHKALANRGDIHRRLGQHQQALADLNHAIDLKPD 1108

Query: 680  FCW 682
            + W
Sbjct: 1109 YAW 1111



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 140/294 (47%), Gaps = 5/294 (1%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG +  + G Y  AI+ +D+ ++  P    A   RG++       + AI+ + +A++  
Sbjct: 911  NRGNSLASLGHYQEAIASYDKAVELKPDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELK 970

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    AW  RG +   LG   EAI   +KA+E +P+  +  + +G        +  A+  
Sbjct: 971  PDNHLAWNNRGSSLHNLGRYQEAITSYNKAVELKPDKHEAWNNQGSSLANLGRYEEAIAS 1030

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                V+L  ++  A+   G +L ++G Y++A  ++ KA+ +  +  +A  +    ++ L 
Sbjct: 1031 YDKAVELKPDDHLAWNNRGNSLKNLGRYEEAIASYDKAVDIKPDDHKALANRGDIHRRLG 1090

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              ++AL  L   + +   ++ A   RG     L Q++ A++DL   + IDP +   +  R
Sbjct: 1091 QHQQALADLNHAIDLKPDYAWAIATRGQTYAQLQQYETALEDLDRTIEIDPDDTWAIGYR 1150

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSE 679
               Y  +  Y+ A+  ++ AL+ + DS   + L C A     +AL T  ++ +E
Sbjct: 1151 GELYLWLHRYQAALTAFNHALEKKSDS--DWTLYCRAL---ALALITNQELATE 1199


>gi|334117425|ref|ZP_08491516.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333460534|gb|EGK89142.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 673

 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 131/266 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N GK  +AI+ +D+ L+  P Y EA   RG A      LEAAI+ F +A++  
Sbjct: 302 NRGIALGNLGKLEAAIASYDKALEIKPDYHEAWNNRGIALGNLGRLEAAITSFDKALEIK 361

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    +ALEF+ +  +  + RG          AA+  
Sbjct: 362 PEYHEAWNNRGIALGNLGRWEEAIVSYDQALEFKADLYEAWNNRGSALGNLGRLEAAIAS 421

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++   +  A+   G+AL ++G ++ A  ++ KA+++  ++   W +      +L 
Sbjct: 422 YDKALEIKAYSYEAWYNRGIALDNLGRWEAAIASYDKALEIKPDYHVPWNNRGIALGNLG 481

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L I     +A++ RG+ L  LG+ ++AI      L I P      Y R
Sbjct: 482 RLEEAIASFDKALEIKPDDDEAWYNRGIALGNLGRWEEAIASFDKALEIKPDYHVGWYNR 541

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
            +    +G  +EAI  YD AL+ + D
Sbjct: 542 GNALGNLGRGKEAIASYDKALEFKPD 567



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 126/266 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  + G++  AI+ +D+ L+  P    A   RG A     +LEAAI+ + +A++  
Sbjct: 268 NRGIALGSLGRFEEAIASYDKALEFKPDEEYAWNNRGIALGNLGKLEAAIASYDKALEIK 327

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG    AI    KALE +P   +  + RGI       +  A+  
Sbjct: 328 PDYHEAWNNRGIALGNLGRLEAAITSFDKALEIKPEYHEAWNNRGIALGNLGRWEEAIVS 387

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++   +   A+   G AL ++G  + A  ++ KA+++     EAW +      +L 
Sbjct: 388 YDQALEFKADLYEAWNNRGSALGNLGRLEAAIASYDKALEIKAYSYEAWYNRGIALDNLG 447

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E A+    + L I   +   ++ RG+ L  LG+ ++AI      L I P + E  Y R
Sbjct: 448 RWEAAIASYDKALEIKPDYHVPWNNRGIALGNLGRLEEAIASFDKALEIKPDDDEAWYNR 507

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
                 +G + EAI  +D AL+++ D
Sbjct: 508 GIALGNLGRWEEAIASFDKALEIKPD 533



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 158/374 (42%), Gaps = 13/374 (3%)

Query: 333 ISDNKSSDSTESRSKLSFKW---DMLKETSNEAKRNKKFCVTRI---SKSKSISVDFRLS 386
           +S +K     ESR   S +W   D L  T  E KR      + I    ++     +    
Sbjct: 175 LSMDKELLQLESRQACSERWKQEDYLALTPQERKRELVRIQSLIDEDGQTPEQQAELFYE 234

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+      + A AI+ FD+ L+  P    A   RG A       E AI+ + +A++  P
Sbjct: 235 QGLLYGYAEESAKAIASFDKALEFKPDNHVAWYNRGIALGSLGRFEEAIASYDKALEFKP 294

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  RG A   LG+   AI    KALE +P+  +  + RGI         AA+   
Sbjct: 295 DEEYAWNNRGIALGNLGKLEAAIASYDKALEIKPDYHEAWNNRGIALGNLGRLEAAITSF 354

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +++  E   A+   G+AL ++G +++A  ++ +A++   +  EAW +      +L  
Sbjct: 355 DKALEIKPEYHEAWNNRGIALGNLGRWEEAIVSYDQALEFKADLYEAWNNRGSALGNLGR 414

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A+    + L I     +A++ RG+ L  LG+ + AI      L I P        R 
Sbjct: 415 LEAAIASYDKALEIKAYSYEAWYNRGIALDNLGRWEAAIASYDKALEIKPDYHVPWNNRG 474

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
                +G   EAI  +D AL+++ D  E       A+Y + IAL    +       FD  
Sbjct: 475 IALGNLGRLEEAIASFDKALEIKPDDDE-------AWYNRGIALGNLGRWEEAIASFDKA 527

Query: 687 GDIDPLFKEYWCKR 700
            +I P +   W  R
Sbjct: 528 LEIKPDYHVGWYNR 541



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 122/266 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G+  +AI+ FD+ L+  P Y EA   RG A       E AI  + +A++  
Sbjct: 336 NRGIALGNLGRLEAAITSFDKALEIKPEYHEAWNNRGIALGNLGRWEEAIVSYDQALEFK 395

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EAW  RG A   LG    AI    KALE +  S +  + RGI       + AA+  
Sbjct: 396 ADLYEAWNNRGSALGNLGRLEAAIASYDKALEIKAYSYEAWYNRGIALDNLGRWEAAIAS 455

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +    +   G+AL ++G  ++A  +  KA+++  +  EAW +      +L 
Sbjct: 456 YDKALEIKPDYHVPWNNRGIALGNLGRLEEAIASFDKALEIKPDDDEAWYNRGIALGNLG 515

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L I   +   ++ RG  L  LG+ K+AI      L   P +    Y R
Sbjct: 516 RWEEAIASFDKALEIKPDYHVGWYNRGNALGNLGRGKEAIASYDKALEFKPDDHAAWYYR 575

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
                 +G   EAI  YD AL+ + D
Sbjct: 576 GISLDDLGRGEEAIASYDKALEFKPD 601


>gi|427710488|ref|YP_007052865.1| hypothetical protein Nos7107_5206 [Nostoc sp. PCC 7107]
 gi|427362993|gb|AFY45715.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 609

 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 34/289 (11%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI+ +++ L+ +P + +A   RG  R++ ++  AAI+DF +A+Q NP   +A+  
Sbjct: 230 GDYPGAIADYNRALQINPHFAQAYYNRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYE 289

Query: 455 RGQARAALGESVEAIQDLSKAL----------------------------------EFEP 480
           RG  RA LG+   AI D  +AL                                  +  P
Sbjct: 290 RGLVRATLGDFPGAITDYEQALAKNPTLALVYGFLAHARCQLGDYQGTIADSNHILQIHP 349

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
             A+   +R        D+  A+ D +  ++L     +AY   GLA  ++ +Y  A E +
Sbjct: 350 EYAEGYCDRATARRCLGDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEY 409

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI++D +F  A+ +     + L   ++AL    Q + I+    +AY+ RG L + L  
Sbjct: 410 AQAIKIDPDFSPAYCNRGNALRLLGAEQRALADYNQAIKINPSLVEAYYNRGSLHYALQD 469

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +  AI D ++ L I+P++      RAS Y+A+ +Y++AI DY+ A+ L+
Sbjct: 470 YHGAIADYTTALQINPNSAAFYSDRASAYYALQDYQKAIADYNQAIVLD 518



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 148/344 (43%), Gaps = 51/344 (14%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI+  ++ L+ DP   EA   RG       +   AI+D+  A+Q NP   +A+  R
Sbjct: 197 EYEQAIADHERALQLDPHLVEAYHYRGNTCYALGDYPGAIADYNRALQINPHFAQAYYNR 256

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G  R+ L +   AI D ++AL+  P+     +ERG+V     DF  A+ D    +  +  
Sbjct: 257 GLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERGLVRATLGDFPGAITDYEQALAKNPT 316

Query: 516 NKSAYTYLGLALSSIGEYKK--AEEAHL-------------------------------- 541
               Y +L  A   +G+Y+   A+  H+                                
Sbjct: 317 LALVYGFLAHARCQLGDYQGTIADSNHILQIHPEYAEGYCDRATARRCLGDYQGAILDYN 376

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +A+QL  N   A+       + L +   A+E   Q + ID  FS AY  RG  L  LG  
Sbjct: 377 RALQLHPNLATAYYGRGLAREALQDYLAAVEEYAQAIKIDPDFSPAYCNRGNALRLLGAE 436

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           ++A+ D +  + I+PS +E  Y R S ++A+ +Y  AI DY  AL +  +S   +  +  
Sbjct: 437 QRALADYNQAIKINPSLVEAYYNRGSLHYALQDYHGAIADYTTALQINPNSAAFYSDRAS 496

Query: 662 AF-----YQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           A+     YQK IA Y  + +            +DP F E W  R
Sbjct: 497 AYYALQDYQKAIADYNQAIV------------LDPSFAEDWYHR 528



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 147/316 (46%), Gaps = 11/316 (3%)

Query: 373 ISKSKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           I+      +DF ++R     G+A+   G Y  A++ F Q L+  P Y      RG     
Sbjct: 135 INPELVTHIDFDIARAFHYRGVARSENGDYQGALADFQQALQWYPQYAAVYSSRGNIFHI 194

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
             E E AI+D   A+Q +P   EA+  RG    ALG+   AI D ++AL+  P+ A   +
Sbjct: 195 LEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGDYPGAIADYNRALQINPHFAQAYY 254

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG+V    KD+ AA+ D +  ++L+ ++  AY   GL  +++G++  A   + +A+  +
Sbjct: 255 NRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERGLVRATLGDFPGAITDYEQALAKN 314

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
                 +G L      L + +  +     +L I   +++ Y  R      LG ++ AI D
Sbjct: 315 PTLALVYGFLAHARCQLGDYQGTIADSNHILQIHPEYAEGYCDRATARRCLGDYQGAILD 374

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLA 662
            +  L + P+     Y R     A+ +Y  A+++Y  A+ ++ D    +      L+ L 
Sbjct: 375 YNRALQLHPNLATAYYGRGLAREALQDYLAAVEEYAQAIKIDPDFSPAYCNRGNALRLLG 434

Query: 663 FYQKEIALYT-ASKIN 677
             Q+ +A Y  A KIN
Sbjct: 435 AEQRALADYNQAIKIN 450



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 136/287 (47%), Gaps = 9/287 (3%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISD 437
           ++ D   ++G  +  +G +  AI+ + + ++  P + EA   RG    +  R+  AAI+D
Sbjct: 1   MNADDFFNQGFNKNLQGDFQGAIADYTEAIQLKPNFAEAYYNRGNIFYSSLRDYRAAIAD 60

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           F +AIQ  P+  EA+  RG    +L +  EAI +   AL   P  A+  H RG V     
Sbjct: 61  FHKAIQLKPNFAEAYHNRGNTLYSLADYEEAIANYEWALAINPKLAESHHGRGNVYCALG 120

Query: 498 DFNAAVEDLSACVKLDKENKS--------AYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           +++ A+ D    ++++ E  +        A+ Y G+A S  G+Y+ A     +A+Q    
Sbjct: 121 EYDRAIADYHQAIEINPELVTHIDFDIARAFHYRGVARSENGDYQGALADFQQALQWYPQ 180

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           +   +      +  L   E+A+   ++ L +D    +AYH RG   + LG +  AI D +
Sbjct: 181 YAAVYSSRGNIFHILEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGDYPGAIADYN 240

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             L I+P   +  Y R      + +Y  AI D++ AL L  D ++ +
Sbjct: 241 RALQINPHFAQAYYNRGLVRSYLKDYPAAIADFNQALQLNPDDVQAY 287



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 124/258 (48%), Gaps = 8/258 (3%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y +AI+ F + ++  P + EA   RG       + E AI+++  A+  NP   E+   RG
Sbjct: 54  YRAAIADFHKAIQLKPNFAEAYHNRGNTLYSLADYEEAIANYEWALAINPKLAESHHGRG 113

Query: 457 QARAALGESVEAIQDLSKALEFEP--------NSADILHERGIVNFKFKDFNAAVEDLSA 508
               ALGE   AI D  +A+E  P        + A   H RG+   +  D+  A+ D   
Sbjct: 114 NVYCALGEYDRAIADYHQAIEINPELVTHIDFDIARAFHYRGVARSENGDYQGALADFQQ 173

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++   +  + Y+  G     + EY++A   H +A+QLD + +EA+ +       L +  
Sbjct: 174 ALQWYPQYAAVYSSRGNIFHILEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGDYP 233

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A+    + L I+  F++AY+ RGL+   L  +  AI D +  L ++P +++  Y R   
Sbjct: 234 GAIADYNRALQINPHFAQAYYNRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERGLV 293

Query: 629 YHAIGEYREAIKDYDAAL 646
              +G++  AI DY+ AL
Sbjct: 294 RATLGDFPGAITDYEQAL 311



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 115/228 (50%), Gaps = 2/228 (0%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI  +++ L+  P    A  GRG AR   ++  AA+ ++ +AI+ +P    A+  
Sbjct: 366 GDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEYAQAIKIDPDFSPAYCN 425

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A   LG    A+ D ++A++  P+  +  + RG +++  +D++ A+ D +  ++++ 
Sbjct: 426 RGNALRLLGAEQRALADYNQAIKINPSLVEAYYNRGSLHYALQDYHGAIADYTTALQINP 485

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            + + Y+    A  ++ +Y+KA   + +AI LD +F E W H  +    L + + AL  L
Sbjct: 486 NSAAFYSDRASAYYALQDYQKAIADYNQAIVLDPSFAEDWYHRGRSRLLLGDLQGALADL 545

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL--SSGLGIDPSNIE 620
            Q L     ++ AY LR  +   L   + AI D   S+ +     NIE
Sbjct: 546 NQALQRQPHWASAYMLRADVYRQLEDFQGAIADFQQSANIYYQEGNIE 593



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 34/290 (11%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+ +   G +  AI+ ++Q L ++P           AR    + +  I+D    +Q +P
Sbjct: 290 RGLVRATLGDFPGAITDYEQALAKNPTLALVYGFLAHARCQLGDYQGTIADSNHILQIHP 349

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              E +  R  AR  LG+   AI D ++AL+  PN A   + RG+     +D+ AAVE+ 
Sbjct: 350 EYAEGYCDRATARRCLGDYQGAILDYNRALQLHPNLATAYYGRGLAREALQDYLAAVEEY 409

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHL------ 557
           +  +K+D +   AY   G AL  +G  ++A   + +AI+++ + +EA+   G L      
Sbjct: 410 AQAIKIDPDFSPAYCNRGNALRLLGAEQRALADYNQAIKINPSLVEAYYNRGSLHYALQD 469

Query: 558 ------------------TQFYQDLANSEKALECLQ-------QVLYIDKRFSKAYHLRG 592
                               FY D A++  AL+  Q       Q + +D  F++ ++ RG
Sbjct: 470 YHGAIADYTTALQINPNSAAFYSDRASAYYALQDYQKAIADYNQAIVLDPSFAEDWYHRG 529

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
                LG  + A+ DL+  L   P       LRA  Y  + +++ AI D+
Sbjct: 530 RSRLLLGDLQGALADLNQALQRQPHWASAYMLRADVYRQLEDFQGAIADF 579



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 141/321 (43%), Gaps = 16/321 (4%)

Query: 364 RNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           R+ +  +    K+  +  +F     +RG    +   Y  AI+ ++  L  +P   E+  G
Sbjct: 52  RDYRAAIADFHKAIQLKPNFAEAYHNRGNTLYSLADYEEAIANYEWALAINPKLAESHHG 111

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPS--------AGEAWKRRGQARAALGESVEAIQDL 472
           RG       E + AI+D+ +AI+ NP            A+  RG AR+  G+   A+ D 
Sbjct: 112 RGNVYCALGEYDRAIADYHQAIEINPELVTHIDFDIARAFHYRGVARSENGDYQGALADF 171

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            +AL++ P  A +   RG +    +++  A+ D    ++LD     AY Y G    ++G+
Sbjct: 172 QQALQWYPQYAAVYSSRGNIFHILEEYEQAIADHERALQLDPHLVEAYHYRGNTCYALGD 231

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           Y  A   + +A+Q++ +F +A+ +       L +   A+    Q L ++    +AY+ RG
Sbjct: 232 YPGAIADYNRALQINPHFAQAYYNRGLVRSYLKDYPAAIADFNQALQLNPDDVQAYYERG 291

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           L+   LG    AI D    L  +P+        A     +G+Y+  I D +  L +  + 
Sbjct: 292 LVRATLGDFPGAITDYEQALAKNPTLALVYGFLAHARCQLGDYQGTIADSNHILQIHPEY 351

Query: 653 MEKF-----VLQCLAFYQKEI 668
            E +       +CL  YQ  I
Sbjct: 352 AEGYCDRATARRCLGDYQGAI 372



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 3/166 (1%)

Query: 359 SNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
           + EA ++    V   +++  I  DF     +RG A    G    A++ ++Q +K +P   
Sbjct: 395 AREALQDYLAAVEEYAQAIKIDPDFSPAYCNRGNALRLLGAEQRALADYNQAIKINPSLV 454

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           EA   RG+     ++   AI+D+T A+Q NP++   +  R  A  AL +  +AI D ++A
Sbjct: 455 EAYYNRGSLHYALQDYHGAIADYTTALQINPNSAAFYSDRASAYYALQDYQKAIADYNQA 514

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           +  +P+ A+  + RG       D   A+ DL+  ++      SAY 
Sbjct: 515 IVLDPSFAEDWYHRGRSRLLLGDLQGALADLNQALQRQPHWASAYM 560



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 2/152 (1%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           V+   +RG        Y  AI+ +   L+ +P        R +A    ++ + AI+D+ +
Sbjct: 454 VEAYYNRGSLHYALQDYHGAIADYTTALQINPNSAAFYSDRASAYYALQDYQKAIADYNQ 513

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI  +PS  E W  RG++R  LG+   A+ DL++AL+ +P+ A     R  V  + +DF 
Sbjct: 514 AIVLDPSFAEDWYHRGRSRLLLGDLQGALADLNQALQRQPHWASAYMLRADVYRQLEDFQ 573

Query: 501 AAVEDL--SACVKLDKENKSAYTYLGLALSSI 530
            A+ D   SA +   + N   Y  +  A++ +
Sbjct: 574 GAIADFQQSANIYYQEGNIEYYQQMLTAIAQL 605



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S  F   R  A      Y  AI+ ++Q +  DP + E    RG +R    +L+ A++D  
Sbjct: 487 SAAFYSDRASAYYALQDYQKAIADYNQAIVLDPSFAEDWYHRGRSRLLLGDLQGALADLN 546

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           +A+Q  P    A+  R      L +   AI D  +       SA+I ++ G + +
Sbjct: 547 QALQRQPHWASAYMLRADVYRQLEDFQGAIADFQQ-------SANIYYQEGNIEY 594


>gi|359461395|ref|ZP_09249958.1| pentapeptide repeat-containing serine/threonine kinase
           [Acaryochloris sp. CCMEE 5410]
          Length = 699

 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 134/268 (50%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           V   L +G  +  +G Y  A+  +   +++DP   EA    G  +    +L+ +I+ +T 
Sbjct: 411 VQGHLQQGDQKFAQGDYQRALREYAAAIQKDPENAEAHFNSGITKRRLNDLKGSIAHYTT 470

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI+  P++ +A+  RG  R+ LG+ + AI D ++A+   P      + RG +  +     
Sbjct: 471 AIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQ 530

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           AA+ D S  +++D +   AY   G+  S +G  K A   + + I+L+ N+ +A+ +    
Sbjct: 531 AAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAIADYSQVIRLNSNYAQAYNNRGIA 590

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y +L N + A+    Q + +D ++++AY  RG     LG  + AI D +  + ID +  +
Sbjct: 591 YVNLGNLKNAIADYTQAIRVDPKYARAYTNRGTAQLTLGNKQAAIADYTQAIDIDSTYAK 650

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
               R +    +G+ +EAI+D   A D+
Sbjct: 651 AYENRGTVKGQLGKKQEAIQDLQKAADI 678



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 152/322 (47%), Gaps = 4/322 (1%)

Query: 330 KSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR-- 387
           ++S+   K  +S+  R    F + +  +++  +   +K    R+S+    S  F L+   
Sbjct: 326 EASLPPTKVVESSVDRRSKPFIFYLAPQSNTTSL--QKDSSPRMSRKVVGSALFTLTLLG 383

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI  V      SA+S     + E     +  + +G  +  Q + + A+ ++  AIQ +P 
Sbjct: 384 GIGYVVAQGLQSAVSPKAITVAEVNRQVQGHLQQGDQKFAQGDYQRALREYAAAIQKDPE 443

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA    G  +  L +   +I   + A+  +P S D  + RG+V  +  D  AA+ D +
Sbjct: 444 NAEAHFNSGITKRRLNDLKGSIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFT 503

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+ ++  AY   G   S +G+ + A   + +AIQ+D  + EA+ +      DL N+
Sbjct: 504 EAIRLNPQHVQAYNNRGTIYSEVGKKQAAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNT 563

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           + A+    QV+ ++  +++AY+ RG+    LG  K AI D +  + +DP        R +
Sbjct: 564 KAAIADYSQVIRLNSNYAQAYNNRGIAYVNLGNLKNAIADYTQAIRVDPKYARAYTNRGT 623

Query: 628 CYHAIGEYREAIKDYDAALDLE 649
               +G  + AI DY  A+D++
Sbjct: 624 AQLTLGNKQAAIADYTQAIDID 645



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 113/227 (49%), Gaps = 1/227 (0%)

Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
           F   + K   N+ K +     T I + K  SVD   +RG+ +   G   +AI+ F + ++
Sbjct: 449 FNSGITKRRLNDLKGSIAHYTTAI-RLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIR 507

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
            +P + +A   RGT  +   + +AAI+D+++AIQ +    EA+  RG  ++ LG +  AI
Sbjct: 508 LNPQHVQAYNNRGTIYSEVGKKQAAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAI 567

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
            D S+ +    N A   + RGI      +   A+ D +  +++D +   AYT  G A  +
Sbjct: 568 ADYSQVIRLNSNYAQAYNNRGIAYVNLGNLKNAIADYTQAIRVDPKYARAYTNRGTAQLT 627

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
           +G  + A   + +AI +D  + +A+ +       L   ++A++ LQ+
Sbjct: 628 LGNKQAAIADYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQK 674



 Score = 43.5 bits (101), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 59/126 (46%)

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G+Y++A   +  AIQ D    EA  +     + L + + ++      + +      AY+ 
Sbjct: 425 GDYQRALREYAAAIQKDPENAEAHFNSGITKRRLNDLKGSIAHYTTAIRLKPTSVDAYNN 484

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RGL+   LG    AI D +  + ++P +++    R + Y  +G+ + AI DY  A+ ++ 
Sbjct: 485 RGLVRSELGDKLAAIADFTEAIRLNPQHVQAYNNRGTIYSEVGKKQAAIADYSQAIQIDA 544

Query: 651 DSMEKF 656
              E +
Sbjct: 545 QYYEAY 550



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 11/121 (9%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLRN----WSKAIRILDSLLAQSY 67
           L  T   I +  +++R++S  A A   R I    L +L+N    +++AIR+ D   A++Y
Sbjct: 560 LGNTKAAIADYSQVIRLNSNYAQAYNNRGIAYVNLGNLKNAIADYTQAIRV-DPKYARAY 618

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
                 NR      L   +  I D  +A+ +D T  +AY  +G     LG+K+EA+   +
Sbjct: 619 -----TNRGTAQLTLGNKQAAIADYTQAIDIDSTYAKAYENRGTVKGQLGKKQEAIQDLQ 673

Query: 128 K 128
           K
Sbjct: 674 K 674



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 16/96 (16%)

Query: 47  CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
            ++ ++S+ IR L+S  AQ+Y      NR   Y  L   K+ I D  +A+++DP   +AY
Sbjct: 565 AAIADYSQVIR-LNSNYAQAYN-----NRGIAYVNLGNLKNAIADYTQAIRVDPKYARAY 618

Query: 107 ILKGCAFSALGRKEEAL----------SVWEKGYEH 132
             +G A   LG K+ A+          S + K YE+
Sbjct: 619 TNRGTAQLTLGNKQAAIADYTQAIDIDSTYAKAYEN 654



 Score = 40.4 bits (93), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 11/125 (8%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLL 63
           ++ RLN    +I      +R+      A       R EL  KL ++ ++++AIR+     
Sbjct: 454 TKRRLNDLKGSIAHYTTAIRLKPTSVDAYNNRGLVRSELGDKLAAIADFTEAIRL----- 508

Query: 64  AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
                +Q   NR   YS++   +  I D  +A+Q+D    +AY  +G   S LG  + A+
Sbjct: 509 -NPQHVQAYNNRGTIYSEVGKKQAAIADYSQAIQIDAQYYEAYFNRGIVQSDLGNTKAAI 567

Query: 124 SVWEK 128
           + + +
Sbjct: 568 ADYSQ 572


>gi|198424483|ref|XP_002131631.1| PREDICTED: similar to tetratricopeptide repeat domain 13 [Ciona
           intestinalis]
          Length = 816

 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 112/470 (23%), Positives = 208/470 (44%), Gaps = 73/470 (15%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF---------------Q 428
           +L  G+  +       A+S F+ +L   P      +   T  AF               +
Sbjct: 96  KLGIGLVYIKSSYPEVAVSFFNDLLLNSP------VDTNTCAAFYFMRGIAFNQLGLDGE 149

Query: 429 RELEAAISDFTEAIQ--SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
              + +ISDFT+A++        + ++ R +  + L +   A +D S+A+   P S  + 
Sbjct: 150 ENSQNSISDFTQALELAERKDQLKIYETRAEVYSKLNDHYHAYKDYSEAINILP-SFRLY 208

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            ER I     + +  A EDL    ++  +   A  Y+   L  +  Y +A E+    + L
Sbjct: 209 LERAICLVFMEKYIEAYEDLKISTRMQPQQPLALHYMATCLFHMRRYPEALESFKAVLAL 268

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
             N ++    +   Y+++ + + A + ++Q + ++   S+ Y  +G LL+  G+ ++A++
Sbjct: 269 KENDVDILNAIALTYREMGDFDSAFDFIEQSISVNPTSSETYQRKGELLYKRGKVEEALQ 328

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
                + + P+N  C Y++  C+  +G++  AIK+          + E+ VL     Y  
Sbjct: 329 AFKYCVSLSPTNDICQYMKGVCHATLGQFYSAIKEITKG------TTERVVLTADGNY-- 380

Query: 667 EIALYTASKINSEFCWF------------DIDGDIDPLFKEYWCK--RLHPKNVCEKVYR 712
              LY  +    EFC +            + D D++  F+E W K  R   KN  E+   
Sbjct: 381 ---LYPPTIFLREFCRYLHSHLDDNRHEVNPDKDLNASFRENWSKSTRNFLKNYTEQPGL 437

Query: 713 QPPLRDSLKKGKLRRQDF----SVTKQKTALLLVADSIGKKIQ----YDCPGFLSNRRQH 764
           QP ++D      +  +DF    +VTK+   LL  A  +G+ +     Y+  G + N R  
Sbjct: 438 QPHVKD------VSAKDFQELPAVTKR---LLCQAHQLGRHLYDQGVYEDDGIIGNLRLF 488

Query: 765 RMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKNGKRARRKDRINIASQ 814
             +GLAAIEI+Q + + W+S ++   Y N    KNG++   +D  +IA Q
Sbjct: 489 TASGLAAIEISQIIQEYWKSPKS---YRN----KNGEKFTWRDAFDIAIQ 531


>gi|145506301|ref|XP_001439116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406290|emb|CAK71719.1| unnamed protein product [Paramecium tetraurelia]
          Length = 815

 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 151/308 (49%), Gaps = 9/308 (2%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G+   A+  F+  +K +P    A   RG     + E E A+ DF  AI+ + +  +A+ 
Sbjct: 155 QGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYI 214

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVEDLSACVKL 512
            RG      GE  +A+ D + A++  PN A   + RG+V FK K +   A+ED +  +K 
Sbjct: 215 NRGVLFKQQGEKEKALHDYNLAIKLNPNYATAYYNRGVV-FKQKGEKQKALEDFNMAIKF 273

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           D     AY   G+     GE +KA + +  AI+L+RN+ +A+ +    ++ L  ++KAL+
Sbjct: 274 DSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINRGVLFKQLGETKKALQ 333

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              Q + ++ +++  Y+ RG+L   LG+ +KA++D  + + ++P+       R   Y   
Sbjct: 334 DYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQ 393

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPL 692
           GE   A+KD+D A+ L  +          A+  + +      +I +    FDI   ++P 
Sbjct: 394 GEIENALKDFDMAIKLNPNY-------ATAYQNRGVLFGEQGQIENALTDFDIAIKLNPT 446

Query: 693 FKEYWCKR 700
           +   +  R
Sbjct: 447 YASAYQNR 454



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 134/263 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+    +G+   A+  F+  +K D  Y +A I RG     Q E E A+ D+  AI+ N
Sbjct: 181 NRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLN 240

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG      GE  +A++D + A++F+ N  D    RG++  +  +   A++D
Sbjct: 241 PNYATAYYNRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKD 300

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +KL++    AY   G+    +GE KKA + + +AI+L+  +   + +    + +L 
Sbjct: 301 YNTAIKLNRNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELG 360

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             +KAL+  + V+ ++  ++ AY  RG+L    G+ + A+KD    + ++P+       R
Sbjct: 361 EKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQNR 420

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
              +   G+   A+ D+D A+ L
Sbjct: 421 GVLFGEQGQIENALTDFDIAIKL 443



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 8/271 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+    +G+   A+  F+  +K +P Y  A   RG     Q E E A  D+  AI+ N
Sbjct: 521 NRGVLYGEQGEIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIKLN 580

Query: 446 PSAGEAWKRRGQ---ARAAL-----GESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           P+   A++ RG+   +R  +     GE  +A+QD   A++  PN A   + RG++  +  
Sbjct: 581 PNYATAYQNRGKQSSSRKGVLYKQQGEKEKALQDYHTAIKLNPNFATAYYNRGVLFGEQG 640

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           +   A++D +  ++L+    +AY   G+     GE +KA + + KAI+ +  +  A+ + 
Sbjct: 641 EKEKALQDYNEAIQLNPNYATAYMNRGVIYGEQGEIEKALQDYNKAIKQNPKYAAAYYNR 700

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              + +    E AL+    V++++   + AY  RG L   +G+ +KA++D +  + ++P+
Sbjct: 701 GNLFDERGEKEDALKDYNIVIFLNPNDADAYINRGALFGEIGEKEKALQDFNQAIKLNPN 760

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDL 648
                Y R       GE  +A++DY+ A+ L
Sbjct: 761 YATAYYNRGVLIRENGEKEKALQDYNMAIQL 791



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 148/315 (46%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+    +G+   A+  F+  +K D  Y +A I RG     Q E E A+ D+  AI+ N
Sbjct: 249 NRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLN 308

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  +A+  RG     LGE+ +A+QD ++A+   P  A   + RG++  +  +   A++D
Sbjct: 309 RNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQD 368

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L+    +AY   G+     GE + A +    AI+L+ N+  A+ +    + +  
Sbjct: 369 FKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQG 428

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E AL      + ++  ++ AY  RG L    G+  KA++D +  + ++P+     Y R
Sbjct: 429 QIENALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTR 488

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
              +   GE  +A++D+D A+ L L+          A+Y + +      +I      F++
Sbjct: 489 GLIFKQQGEKVQALQDFDKAIQLNLNY-------ATAYYNRGVLYGEQGEIEKALQDFNM 541

Query: 686 DGDIDPLFKEYWCKR 700
              ++P +   +  R
Sbjct: 542 AIKLNPNYDTAYQNR 556



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 135/264 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RGI     G++  A+  ++  +K +P   +A    G     Q + + A+ +F  AI+ 
Sbjct: 112 INRGILFKQLGEHEKALQDYNMAIKLNPNDADAFNNLGNLLDDQGQKDKALQNFNTAIKL 171

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+  RG      GE  +A++D + A++F+ N  D    RG++  +  +   A+ 
Sbjct: 172 NPNDATAYYNRGVVFKQKGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALH 231

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  +KL+    +AY   G+     GE +KA E    AI+ D N+++A+ +    ++  
Sbjct: 232 DYNLAIKLNPNYATAYYNRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQ 291

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              EKAL+     + +++ ++ AY  RG+L   LG+ KKA++D +  + ++P      Y 
Sbjct: 292 GEKEKALKDYNTAIKLNRNYADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYN 351

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R   +  +GE ++A++D+   + L
Sbjct: 352 RGVLFCELGEKQKALQDFKNVIRL 375



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 133/264 (50%), Gaps = 2/264 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+    +G+   AI  ++ ++K +     A I RG       E E A+ D+  AI+ N
Sbjct: 79  NRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQDYNMAIKLN 138

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAVE 504
           P+  +A+   G      G+  +A+Q+ + A++  PN A   + RG+V FK K +   A+E
Sbjct: 139 PNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNRGVV-FKQKGEKEKALE 197

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  +K D     AY   G+     GE +KA   +  AI+L+ N+  A+ +    ++  
Sbjct: 198 DFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYATAYYNRGVVFKQK 257

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              +KALE     +  D  +  AY  RG+L    G+ +KA+KD ++ + ++ +  +    
Sbjct: 258 GEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYIN 317

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R   +  +GE ++A++DY+ A+ L
Sbjct: 318 RGVLFKQLGETKKALQDYNQAIRL 341



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 128/248 (51%)

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
           + RG     Q E E A+ D+ +AI  NP +  A+  RG      GE  +A++D + A++ 
Sbjct: 10  LNRGVLFKQQGENEKALQDYNKAIILNPKSAIAYYNRGILFCEKGEKEKALKDYNMAIKL 69

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
            PN     + RG++  +  + + A++D +  +KL++ N +AY   G+    +GE++KA +
Sbjct: 70  NPNYDIAYYNRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLGEHEKALQ 129

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
            +  AI+L+ N  +A+ +L     D    +KAL+     + ++   + AY+ RG++    
Sbjct: 130 DYNMAIKLNPNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNRGVVFKQK 189

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
           G+ +KA++D +  +  D + I+    R   +   GE  +A+ DY+ A+ L  +    +  
Sbjct: 190 GEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPNYATAYYN 249

Query: 659 QCLAFYQK 666
           + + F QK
Sbjct: 250 RGVVFKQK 257



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 152/310 (49%), Gaps = 6/310 (1%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           +++ D  L+RG+    +G+   A+  +++ +  +P    A   RG     + E E A+ D
Sbjct: 3   TVNADECLNRGVLFKQQGENEKALQDYNKAIILNPKSAIAYYNRGILFCEKGEKEKALKD 62

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           +  AI+ NP+   A+  RG      GE  +AIQD +  ++   N+ +    RGI+  +  
Sbjct: 63  YNMAIKLNPNYDIAYYNRGVLFGEQGEKDKAIQDYNTVIKLNENNTNAYINRGILFKQLG 122

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           +   A++D +  +KL+  +  A+  LG  L   G+  KA +    AI+L+ N   A+ + 
Sbjct: 123 EHEKALQDYNMAIKLNPNDADAFNNLGNLLDDQGQKDKALQNFNTAIKLNPNDATAYYNR 182

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              ++     EKALE     +  D  +  AY  RG+L    G+ +KA+ D +  + ++P+
Sbjct: 183 GVVFKQKGEKEKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALHDYNLAIKLNPN 242

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ---KEIAL---Y 671
                Y R   +   GE ++A++D++ A+  + + ++ ++ + + F Q   KE AL    
Sbjct: 243 YATAYYNRGVVFKQKGEKQKALEDFNMAIKFDSNYIDAYINRGVLFKQQGEKEKALKDYN 302

Query: 672 TASKINSEFC 681
           TA K+N  + 
Sbjct: 303 TAIKLNRNYA 312



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 145/314 (46%), Gaps = 42/314 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+    +G+  +A++ FD  +K +P Y  A   RG     + E + A+ D+  AI+ N
Sbjct: 419 NRGVLFGEQGQIENALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLN 478

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG      GE V+A+QD  KA++   N A   + RG++  +  +   A++D
Sbjct: 479 PNYDIAYYTRGLIFKQQGEKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQD 538

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ------ 559
            +  +KL+    +AY   G+     GE +KA + +  AI+L+ N+  A+ +  +      
Sbjct: 539 FNMAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIKLNPNYATAYQNRGKQSSSRK 598

Query: 560 --FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              Y+     EKAL+     + ++  F+ AY+ RG+L    G+ +KA++D +  + ++P+
Sbjct: 599 GVLYKQQGEKEKALQDYHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQDYNEAIQLNPN 658

Query: 618 ----------------NIE------------------CLYLRASCYHAIGEYREAIKDYD 643
                            IE                    Y R + +   GE  +A+KDY+
Sbjct: 659 YATAYMNRGVIYGEQGEIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDYN 718

Query: 644 AALDLELDSMEKFV 657
             + L  +  + ++
Sbjct: 719 IVIFLNPNDADAYI 732



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 125/271 (46%), Gaps = 8/271 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+     G+   A+  F  +++ +P Y  A   RG     Q E+E A+ DF  AI+ N
Sbjct: 351 NRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLN 410

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A++ RG      G+   A+ D   A++  P  A     RG +  K  + + A++D
Sbjct: 411 PNYATAYQNRGVLFGEQGQIENALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQD 470

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +KL+     AY   GL     GE  +A +   KAIQL+ N+  A+ +    Y +  
Sbjct: 471 YNMAIKLNPNYDIAYYTRGLIFKQQGEKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQG 530

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             EKAL+     + ++  +  AY  RG+L    G+ +KA +D +  + ++P+       R
Sbjct: 531 EIEKALQDFNMAIKLNPNYDTAYQNRGVLYKQQGEKEKAFQDYNMAIKLNPNYATAYQNR 590

Query: 626 AS--------CYHAIGEYREAIKDYDAALDL 648
                      Y   GE  +A++DY  A+ L
Sbjct: 591 GKQSSSRKGVLYKQQGEKEKALQDYHTAIKL 621



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 127/274 (46%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K  S  +D  ++RG+    +G+   A+  ++  +K +  Y +A I RG       E + A
Sbjct: 272 KFDSNYIDAYINRGVLFKQQGEKEKALKDYNTAIKLNRNYADAYINRGVLFKQLGETKKA 331

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + D+ +AI+ NP     +  RG     LGE  +A+QD    +   PN A     RG++  
Sbjct: 332 LQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKNVIRLNPNYATAYQNRGVLYG 391

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           +  +   A++D    +KL+    +AY   G+     G+ + A      AI+L+  +  A+
Sbjct: 392 EQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQGQIENALTDFDIAIKLNPTYASAY 451

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            +    +      +KAL+     + ++  +  AY+ RGL+    G+  +A++D    + +
Sbjct: 452 QNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTRGLIFKQQGEKVQALQDFDKAIQL 511

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + +     Y R   Y   GE  +A++D++ A+ L
Sbjct: 512 NLNYATAYYNRGVLYGEQGEIEKALQDFNMAIKL 545



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 125/268 (46%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D  ++RG+     G+   A+  ++Q ++ +P Y      RG       E + A+ DF  
Sbjct: 312 ADAYINRGVLFKQLGETKKALQDYNQAIRLNPQYAIGYYNRGVLFCELGEKQKALQDFKN 371

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            I+ NP+   A++ RG      GE   A++D   A++  PN A     RG++  +     
Sbjct: 372 VIRLNPNYATAYQNRGVLYGEQGEIENALKDFDMAIKLNPNYATAYQNRGVLFGEQGQIE 431

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+ D    +KL+    SAY   G      GE  KA + +  AI+L+ N+  A+      
Sbjct: 432 NALTDFDIAIKLNPTYASAYQNRGNLFDKKGEKDKALQDYNMAIKLNPNYDIAYYTRGLI 491

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           ++      +AL+   + + ++  ++ AY+ RG+L    G+ +KA++D +  + ++P+   
Sbjct: 492 FKQQGEKVQALQDFDKAIQLNLNYATAYYNRGVLYGEQGEIEKALQDFNMAIKLNPNYDT 551

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
               R   Y   GE  +A +DY+ A+ L
Sbjct: 552 AYQNRGVLYKQQGEKEKAFQDYNMAIKL 579



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 105/209 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+    +G+   A+  +   +K +P +  A   RG     Q E E A+ D+ EAIQ NP
Sbjct: 598 KGVLYKQQGEKEKALQDYHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQDYNEAIQLNP 657

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   A+  RG      GE  +A+QD +KA++  P  A   + RG +  +  +   A++D 
Sbjct: 658 NYATAYMNRGVIYGEQGEIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDY 717

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + L+  +  AY   G     IGE +KA +   +AI+L+ N+  A+ +     ++   
Sbjct: 718 NIVIFLNPNDADAYINRGALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVLIRENGE 777

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLL 595
            EKAL+     + +++ +S AY+ RGL L
Sbjct: 778 KEKALQDYNMAIQLNRNYSTAYYNRGLSL 806



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 121/249 (48%), Gaps = 8/249 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--------QRELEAAISD 437
           +RG+    +G+   A   ++  +K +P Y  A   RG   +         Q E E A+ D
Sbjct: 555 NRGVLYKQQGEKEKAFQDYNMAIKLNPNYATAYQNRGKQSSSRKGVLYKQQGEKEKALQD 614

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           +  AI+ NP+   A+  RG      GE  +A+QD ++A++  PN A     RG++  +  
Sbjct: 615 YHTAIKLNPNFATAYYNRGVLFGEQGEKEKALQDYNEAIQLNPNYATAYMNRGVIYGEQG 674

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           +   A++D +  +K + +  +AY   G      GE + A + +   I L+ N  +A+ + 
Sbjct: 675 EIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDYNIVIFLNPNDADAYINR 734

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              + ++   EKAL+   Q + ++  ++ AY+ RG+L+   G+ +KA++D +  + ++ +
Sbjct: 735 GALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVLIRENGEKEKALQDYNMAIQLNRN 794

Query: 618 NIECLYLRA 626
                Y R 
Sbjct: 795 YSTAYYNRG 803



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 79/146 (54%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG+    +G+   A+  +++ +K++P Y  A   RG     + E E A+ D+   I  
Sbjct: 664 MNRGVIYGEQGEIEKALQDYNKAIKQNPKYAAAYYNRGNLFDERGEKEDALKDYNIVIFL 723

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+  +A+  RG     +GE  +A+QD ++A++  PN A   + RG++  +  +   A++
Sbjct: 724 NPNDADAYINRGALFGEIGEKEKALQDFNQAIKLNPNYATAYYNRGVLIRENGEKEKALQ 783

Query: 505 DLSACVKLDKENKSAYTYLGLALSSI 530
           D +  ++L++   +AY   GL+L  I
Sbjct: 784 DYNMAIQLNRNYSTAYYNRGLSLRYI 809


>gi|145519597|ref|XP_001445665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413120|emb|CAK78268.1| unnamed protein product [Paramecium tetraurelia]
          Length = 681

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 127/253 (50%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           +  AI  +   L  +  + +++  RG A    R    AI+D+T+A++ +P    A+  RG
Sbjct: 285 FIKAIEFYTMALMFNSNHFKSIFNRGFAFDKLRMYNDAINDYTKAVEMDPKNAYAYYNRG 344

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            +    G+   AI+D +KA+E +P+ AD  H +G    K      A+ + + C++LDK +
Sbjct: 345 ISYDKKGDYNLAIKDFAKAIELDPSKADFYHNKGFAMKKKNQIKEAILEFNECLRLDKNH 404

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY         +GE+ KA++ +L A  +  N      H+          E AL+    
Sbjct: 405 FKAYYNRANCYEKLGEFDKAQQDYLIANNVVPNNPNTLTHIGILMDRQQKLEDALKYFNS 464

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L ID  ++ AY+ RGL+   +G+++KA  D +  + I+P N   ++ R  C  ++ ++ 
Sbjct: 465 SLKIDSNYAPAYNGRGLVYDKIGEYEKACIDFNKAIDIEPQNPVYIHNRGCCKRSMNKFE 524

Query: 637 EAIKDYDAALDLE 649
           +A++D+  AL L+
Sbjct: 525 QALEDFKKALSLD 537



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 34/224 (15%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q++LE A+  F  +++ + +   A+  RG     +GE  +A  D +KA++ EP +   +H
Sbjct: 452 QQKLEDALKYFNSSLKIDSNYAPAYNGRGLVYDKIGEYEKACIDFNKAIDIEPQNPVYIH 511

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG        F  A+ED    + LD +N   Y+ +GL L  + ++              
Sbjct: 512 NRGCCKRSMNKFEQALEDFKKALSLDSKNPIIYSNMGLVLRKMEDF-------------- 557

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
                               E A  C  Q L      ++  + RG  L  LGQ ++AI D
Sbjct: 558 --------------------ETAAYCYSQELIYSSENTRTLNNRGYCLAKLGQFEEAISD 597

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            S  + +DP NI  +Y R  C   IGE+ +AI+D+   + L+ D
Sbjct: 598 YSRAISLDPINIHAIYNRGICNERIGEFHKAIEDFSQVIHLQND 641



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-S 444
           +RG      G++  AIS + + +  DP+   A+  RG       E   AI DF++ I   
Sbjct: 580 NRGYCLAKLGQFEEAISDYSRAISLDPINIHAIYNRGICNERIGEFHKAIEDFSQVIHLQ 639

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           N     A+  RG     +GE   AI D SKALE +
Sbjct: 640 NDQGANAYFNRGCCYDNIGEMDLAIADYSKALEID 674



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E A++   ++L  D      Y+LRG     LGQ   AI D S  L +D +++   + RAS
Sbjct: 59  EIAIQDCNKLLESDGDNVGGYYLRGCANEKLGQTDLAIDDFSKVLLLDENHVNAAFARAS 118

Query: 628 CYHAIGEYREAIKDYDAALD 647
           C +  G++  AI+DY  AL+
Sbjct: 119 CLNLKGDFAGAIEDYTRALE 138


>gi|427719490|ref|YP_007067484.1| hypothetical protein Cal7507_4274 [Calothrix sp. PCC 7507]
 gi|427351926|gb|AFY34650.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 340

 Score =  115 bits (289), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 131/263 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+   G    AIS ++Q ++  P  P A   RG AR    +++ AISD+ +AI+  
Sbjct: 58  NRGLARFQLGDINGAISDYNQAIQLQPDSPLAYNNRGLARFELGDIKEAISDYNQAIKLE 117

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+  RG A   LG+    I D  +A++F+PN A+  + RG   F+  D NA + D
Sbjct: 118 PNYAEAYNNRGNAYVKLGDINAGIFDYDRAIQFQPNHAEFYNNRGYARFELGDINAGIFD 177

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L  +  SAY   G A  S+GE ++A     +AIQL  +  +A+         L 
Sbjct: 178 YDRAIELQPDLASAYHNRGYARFSLGEKQEAYADCDRAIQLQPSNPKAYYGRGTVQLSLG 237

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A     + + +   +  AY  RG   + L  ++ AI D S  + +  +  +  + R
Sbjct: 238 EYQEAFADFDRAIQLQPDYYIAYFNRGFSRYQLDDNEGAISDYSQAISLHSNYPKAYFNR 297

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
               + +G+ + AI+D+  A +L
Sbjct: 298 GLAKNELGDKQAAIEDFQTAANL 320



 Score =  109 bits (272), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 80/289 (27%), Positives = 129/289 (44%), Gaps = 34/289 (11%)

Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
           KS  VD  ++    +   G   +AI  ++++++  P    A   RG AR    ++  AIS
Sbjct: 15  KSFVVDDYIAAANQKFQAGDIKAAIIDYEKVIQLQPDLTPAYNNRGLARFQLGDINGAIS 74

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           D+ +AIQ  P +  A+  RG AR  LG+  EAI D ++A++ EPN A+  + RG    K 
Sbjct: 75  DYNQAIQLQPDSPLAYNNRGLARFELGDIKEAISDYNQAIKLEPNYAEAYNNRGNAYVKL 134

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
            D NA + D    ++    +   Y   G A   +G+       + +AI+L          
Sbjct: 135 GDINAGIFDYDRAIQFQPNHAEFYNNRGYARFELGDINAGIFDYDRAIELQ--------- 185

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                 DLA+                    AYH RG     LG+ ++A  D    + + P
Sbjct: 186 -----PDLAS--------------------AYHNRGYARFSLGEKQEAYADCDRAIQLQP 220

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           SN +  Y R +   ++GEY+EA  D+D A+ L+ D    +  +  + YQ
Sbjct: 221 SNPKAYYGRGTVQLSLGEYQEAFADFDRAIQLQPDYYIAYFNRGFSRYQ 269



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 4/189 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           +F  +RG A+   G   + I  +D+ ++  P    A   RG AR    E + A +D   A
Sbjct: 156 EFYNNRGYARFELGDINAGIFDYDRAIELQPDLASAYHNRGYARFSLGEKQEAYADCDRA 215

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ  PS  +A+  RG  + +LGE  EA  D  +A++ +P+       RG   ++  D   
Sbjct: 216 IQLQPSNPKAYYGRGTVQLSLGEYQEAFADFDRAIQLQPDYYIAYFNRGFSRYQLDDNEG 275

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D S  + L      AY   GLA + +G+    ++A ++  Q   N  +  G++  + 
Sbjct: 276 AISDYSQAISLHSNYPKAYFNRGLAKNELGD----KQAAIEDFQTAANLYQQQGNIEGYN 331

Query: 562 QDLANSEKA 570
             L+N + +
Sbjct: 332 TALSNIQSS 340


>gi|171913931|ref|ZP_02929401.1| TPR repeat [Verrucomicrobium spinosum DSM 4136]
          Length = 468

 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 135/292 (46%), Gaps = 6/292 (2%)

Query: 363 KRNKKFCVTRISKSKSISVDFRL------SRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
           K N    +T  + + +  +D R       +R +A V +  +  AI+  D  LK +P    
Sbjct: 38  KGNPDLAITHYTSALAKGLDSRFEAIVLQNRALAWVEKLSWQKAIADADAALKINPSSAT 97

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           A   R  AR   RE++ AI D++EAI+  P        RG       +   A+QD   AL
Sbjct: 98  AFAVRAEARKGLREIDRAILDYSEAIKLEPGDPIYLNNRGNLFDGQQKWDLALQDFDNAL 157

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           + +P  A  L  RG        +  A+ED +A ++LD +N  AY   GL  +S+G+ ++A
Sbjct: 158 KIQPRYAHALAGRGEARRNLGQYEKALEDFNASIELDPKNPGAYNNRGLTQASLGKREEA 217

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
           +    KAI L  NF  A+ +    Y  L  ++ A     Q L ID  ++ A + R +L  
Sbjct: 218 QADFNKAIDLLPNFAPAYNNRGFNYASLGRTKDAQTDYNQALKIDPAYTPALNNRAMLRV 277

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             G  K AI D S  + + P N+     RA+ Y   G+  +A+ D D A+ L
Sbjct: 278 AEGSLKDAIADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKALADLDTAIKL 329



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 5/166 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    + G+   A + ++Q LK DP Y  AL  R   R  +  L+ AI+DF+E I+  
Sbjct: 237 NRGFNYASLGRTKDAQTDYNQALKIDPAYTPALNNRAMLRVAEGSLKDAIADFSEIIRLR 296

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  R  A    G+  +A+ DL  A++  P          I       ++ A+++
Sbjct: 297 PDNVHAYNNRAAAYDKAGQPEKALADLDTAIKLAPQDGQTHKNLAIAYVNRGRWDEALKE 356

Query: 506 LSACVKLDKENKSAYTYLGLALSS-----IGEYKKAEEAHLKAIQL 546
            +    L  E+   + +LG  L S     + +  KA +A  KA +L
Sbjct: 357 FTTASSLLPEDVETWNWLGRLLGSHPQSDLRDGAKAVQAATKACEL 402



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 5/193 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ Q + GK   A + F++ +   P +  A   RG   A     + A +D+ +A++ +
Sbjct: 203 NRGLTQASLGKREEAQADFNKAIDLLPNFAPAYNNRGFNYASLGRTKDAQTDYNQALKID 262

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   R   R A G   +AI D S+ +   P++    + R     K      A+ D
Sbjct: 263 PAYTPALNNRAMLRVAEGSLKDAIADFSEIIRLRPDNVHAYNNRAAAYDKAGQPEKALAD 322

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY---- 561
           L   +KL  ++   +  L +A  + G + +A +    A  L    +E W  L +      
Sbjct: 323 LDTAIKLAPQDGQTHKNLAIAYVNRGRWDEALKEFTTASSLLPEDVETWNWLGRLLGSHP 382

Query: 562 -QDLANSEKALEC 573
             DL +  KA++ 
Sbjct: 383 QSDLRDGAKAVQA 395


>gi|431806833|ref|YP_007233731.1| hypothetical protein BPP43_00580 [Brachyspira pilosicoli P43/6/78]
 gi|430780192|gb|AGA65476.1| tetratricopeptide repeat-containing protein [Brachyspira pilosicoli
           P43/6/78]
          Length = 352

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 157/302 (51%), Gaps = 4/302 (1%)

Query: 321 SNTNSESYSKSSISDNKSSDSTESRSK-LSFKWDMLKETSNEAKRNKKFCVTRISKSKSI 379
           +N ++E+YS     ++++    E  +K +S K   +   +N    NK+  + R++     
Sbjct: 39  NNIDAENYSDFDDFNDRAKAFNEELNKIMSDKKHFIVSFTNIVDNNKEVDIDRLNNLTDY 98

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
             D+  S+GI +   G+YA AI  +D+ +K +P   +A   +  A+     L+ AI ++ 
Sbjct: 99  H-DYN-SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYD 156

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI+       A+  RG  ++ LG   EAI+D  KAL  +PN  D  + +G++  +    
Sbjct: 157 KAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFS 216

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A++D +  +KL+     AY   G+A  ++G Y++A + + KAI+L+ N+  A+ +   
Sbjct: 217 KEAIKDFNKAIKLNPNYALAYNNRGIAKDNLGLYEEAIKDYNKAIKLNPNYAFAYNNRGN 276

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +L   E+A+E   + + ++  +  AY+ RG     LG +++A+KD    L +DPSN 
Sbjct: 277 AKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGLYEEALKDYKKALELDPSN- 335

Query: 620 EC 621
           EC
Sbjct: 336 EC 337



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 19/265 (7%)

Query: 424 ARAFQRELEAAISD-------FTEAIQSNPSAG----------EAWKRRGQARAALGESV 466
           A+AF  EL   +SD       FT  + +N                +  +G  ++A GE  
Sbjct: 56  AKAFNEELNKIMSDKKHFIVSFTNIVDNNKEVDIDRLNNLTDYHDYNSKGIYKSANGEYA 115

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           EAI+   +A++  PN AD  + + I   K      A+E+    ++L  +   AY   GL 
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLL 175

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
            S +G  ++A +   KA+ +D N  +A+ +      +L  S++A++   + + ++  ++ 
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYAL 235

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RG+    LG +++AIKD +  + ++P+       R +    +G Y EAI+D+D A+
Sbjct: 236 AYNNRGIAKDNLGLYEEAIKDYNKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAI 295

Query: 647 DLELDSMEKFVLQCLAFYQKEIALY 671
            L  D ++ +      F ++ + LY
Sbjct: 296 KLNPDYVDAY--NNRGFTKENLGLY 318



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 5/148 (3%)

Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K++S+D  L     ++G+ +   G    AI  F++ +K +P Y  A   RG A+      
Sbjct: 191 KALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGIAKDNLGLY 250

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI D+ +AI+ NP+   A+  RG A+  LG   EAI+D  KA++  P+  D  + RG 
Sbjct: 251 EEAIKDYNKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGF 310

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSA 519
                  +  A++D    ++LD  N+ A
Sbjct: 311 TKENLGLYEEALKDYKKALELDPSNECA 338



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 11/111 (9%)

Query: 24  DELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDICNRAFC 78
           DE ++++  MA A      A+ +L  L  ++  + KAI +        Y      NR   
Sbjct: 122 DEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY------NRGLL 175

Query: 79  YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
            S L L +  I+D DKAL +DP L  AY  KG     LG  +EA+  + K 
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKA 226



 Score = 43.9 bits (102), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++++++KAI+ L+   A +Y      NR      L L++  I D DKA++L+P  + AY 
Sbjct: 253 AIKDYNKAIK-LNPNYAFAYN-----NRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYN 306

Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
            +G     LG  EEAL  ++K  E
Sbjct: 307 NRGFTKENLGLYEEALKDYKKALE 330



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 6/82 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++++++KAI+ L+   A +Y      NR      L L++  I+D +KA++L+P    AY 
Sbjct: 219 AIKDFNKAIK-LNPNYALAYN-----NRGIAKDNLGLYEEAIKDYNKAIKLNPNYAFAYN 272

Query: 108 LKGCAFSALGRKEEALSVWEKG 129
            +G A   LG  EEA+  ++K 
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKA 294


>gi|409994049|ref|ZP_11277171.1| TPR repeat-containing serine/threonine protein kinase [Arthrospira
           platensis str. Paraca]
 gi|206585491|gb|ACI15551.1| serine/threonine protein kinase [Arthrospira platensis S6]
 gi|409935123|gb|EKN76665.1| TPR repeat-containing serine/threonine protein kinase [Arthrospira
           platensis str. Paraca]
          Length = 732

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 13/284 (4%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T+  K    + D   +R +A    G + +AI+  +Q+++ +P   +A   RG A   Q  
Sbjct: 401 TQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQEN 460

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            EAAI D+TE I+  P   EA++ RG A    G     + D ++A+   P SA   + RG
Sbjct: 461 YEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAAAYYNRG 520

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
              F   D+  A+ D +  +  + +N  AY     TY+ L     G Y+ A E+  ++IQ
Sbjct: 521 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 575

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
           L+   ++ + +    Y ++ N + A+    + + ++   SKA+  RG L+H L + ++ A
Sbjct: 576 LNPTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAEDYEAA 633

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           I D S  + ++P++ E    RA  +  +G Y +AI DY  A+ +
Sbjct: 634 IADYSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYAQAIRI 677



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 1/276 (0%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA            +F  + + DP+  EA + RG  R    + EAAI  F  +IQ  P 
Sbjct: 316 GIAATGLVGLMVIFGLFQVLNRPDPVKSEAALKRGVERLESGDPEAAIKAFNRSIQLFPD 375

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA+++R  A   L +  +AI D ++A++ +P + DI   R +   +  DF  A+ DL+
Sbjct: 376 NSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLN 435

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+ E+  A+   GLA  +   Y+ A   + + I+   +  EA+      +    N 
Sbjct: 436 QVIRLNPEDTDAFYQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNL 495

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +  +    + + ++ + + AY+ RG     LG ++ A+ D +  +  +P N E    R S
Sbjct: 496 QAGMADYTEAIRLNPQSAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCS 555

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            Y  +G Y  AI+    ++ L   +M+ +  +C+A+
Sbjct: 556 TYINLGNYEAAIESCSRSIQLNPTAMD-YNNRCIAY 590



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 1/261 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  AI+ + Q +K DP  P+    R  A     +   AI+D  + I+ NP   +A+ +R
Sbjct: 392 KYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQR 451

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A         AI D ++ +  +P+ ++    RG  + K  +  A + D +  ++L+ +
Sbjct: 452 GLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQ 511

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           + +AY   G A   +G+Y+ A   + + I  + +  EA+G+    Y +L N E A+E   
Sbjct: 512 SAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCS 571

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + ++   +  Y+ R +    +  +  AI D +  + ++P+N +    R   +    +Y
Sbjct: 572 RSIQLNPT-AMDYNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDY 630

Query: 636 REAIKDYDAALDLELDSMEKF 656
             AI DY  A+ L  +  E +
Sbjct: 631 EAAIADYSQAISLNPNDAESY 651



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R IA +N   Y +AI    + ++ +P   +A   RG   +   + EAAI+D+++AI  N
Sbjct: 585 NRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLN 644

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  E++  R QA A LG   +AI D ++A+   PN A   + RG+V     D   A+ D
Sbjct: 645 PNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 704

Query: 506 LSACVKL 512
                KL
Sbjct: 705 FEQAGKL 711



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ + G Y  A++ ++Q++  +P   EA   R +        EAAI   + +IQ N
Sbjct: 518 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 577

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+A + +  R  A   +     AI D +KA+E EPN++     RG+V+   +D+ AA+ D
Sbjct: 578 PTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIAD 636

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            S  + L+  +  +Y+    A + +G Y +A   + +AI++  N   A+
Sbjct: 637 YSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAF 685



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 54/103 (52%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + E A++   + + +    S+A+  R    + L ++++AI D +  + +DP+N +  + 
Sbjct: 357 GDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 416

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           R+  YH +G++  AI D +  + L  +  + F  + LA Y +E
Sbjct: 417 RSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQE 459



 Score = 47.0 bits (110), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 1/145 (0%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           +N G Y +AI    + ++ +P   +    R  A    +  +AAI D T+AI+  P+  +A
Sbjct: 558 INLGNYEAAIESCSRSIQLNPTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKA 616

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
              RG   +   +   AI D S+A+   PN A+    R   + +  +++ A+ D +  ++
Sbjct: 617 HSNRGLVHSLAEDYEAAIADYSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYAQAIR 676

Query: 512 LDKENKSAYTYLGLALSSIGEYKKA 536
           +      A+   G+  +S+G+ + A
Sbjct: 677 IRPNLAGAFYGRGMVRASLGDRRGA 701


>gi|145478569|ref|XP_001425307.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392376|emb|CAK57909.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1388

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 142/272 (52%), Gaps = 10/272 (3%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPM-YPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +GI     G    A+++F + ++ D M YP         RA ++E E A+ +F +AI+  
Sbjct: 128 KGIIMKESGSQQEALAVFQKTIELDQMNYPAHYQSGLILRALKKE-EDALLEFNKAIEIR 186

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P++ +A+  R +    + +  EA+ D +K +E +P  A     RGI+  + + +  A+ D
Sbjct: 187 PTSSDAYFERAELLTDMNKKEEALVDYNKTIELDPKKAQTYECRGILLKQLEKYEEALSD 246

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +KL+ +    + + GL    + E +KA E + +AI ++  F +A+ +    Y+++ 
Sbjct: 247 YNMAIKLNPKVYKWFYFQGLLFKVLNEKEKALEEYNQAISVNPKFAKAYKNRAILYKEID 306

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGL--------LLHGLGQHKKAIKDLSSGLGIDPS 617
            ++KAL    ++L ++ +  K Y  RG         LL  LGQ++ A++D +  + I+P+
Sbjct: 307 QNDKALSDYTKILELNPKDEKIYQFRGKKLVLIKGNLLKQLGQNELALQDYTKTIEINPN 366

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           + E    RA+ Y  +G+   A KDYD  L++E
Sbjct: 367 DTENYVRRATLYKQLGQNDLATKDYDKILEIE 398



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 110/218 (50%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E A+ D+T+ I+ NP+  E + RR      LG++  A +D  K LE EP ++++ +++ +
Sbjct: 351 ELALQDYTKTIEINPNDTENYVRRATLYKQLGQNDLATKDYDKILEIEPKNSNVYYKKAL 410

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
              + +    A+  L+  ++L+ ++ + Y   G       +   A   + KAI+++ N  
Sbjct: 411 FLEELQQNELAITLLNQAIQLNPQDANLYLKRGDLNKLTNQLDMAVNDYSKAIEINPNNE 470

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A  +    ++ L  +E+A +   ++L I+     AYH RG L   L Q + A++D +  
Sbjct: 471 VALLNRALLFKQLNQTERAFQDFHRILEINHNHLNAYHHRGNLYKELNQDELALQDFNKI 530

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           + IDP  +   Y RA  Y    +   A++D + A++L+
Sbjct: 531 IQIDPKIVIVYYNRAKIYQKQQKNDLALQDLNVAVELD 568



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 158/357 (44%), Gaps = 17/357 (4%)

Query: 305 HDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKR 364
           +D H  L +   SL+ +    +SY+K++  D  +  +  +R+ L   W+ L E       
Sbjct: 606 YDAHVNLGNLLKSLDQNQQALDSYNKAAELDQNNYLAYHNRAIL---WNKLNEKEKALAD 662

Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
             K  +     + S S     SR     +  +   AI  F + L+ +P      I  G  
Sbjct: 663 FDKAILLNPKSAVSYS-----SRASLLSDMNQKDRAIDDFTKSLQINPKQRIQFIFLGNL 717

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA-RAALGESVEAIQDLSKALEFEPNSA 483
              ++++  AI D+TEAI  NP+  + +  RG   +    E  +A+QD +KA+E  PNS 
Sbjct: 718 HKQKQQISQAIQDYTEAININPNQADYYVSRGNILQDPAKEHEKALQDYNKAIEIAPNSF 777

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY--------LGLALSSIGEYKK 535
              ++R ++         A+ D +  ++++ +N+  Y          LGL    + + + 
Sbjct: 778 ISYYQRALLYRSIDKIELAIADCNKSIEINPKNELPYIVKGNFDLLILGLIFKELNKPQD 837

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A   + KA+ ++     A       Y  + N ++AL    +V+ I    S  Y  R  LL
Sbjct: 838 AIAEYNKALIINPTCTSALLKRGDAYDLMKNHQEALNDFTKVIEIIPNESGGYSSRAPLL 897

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
             L Q ++A++D +  + ++P      Y RA  Y+ + +   A++DY+  ++L  +S
Sbjct: 898 MKLAQKEEALQDYNKAIEVNPGEAANYYNRAIYYNQVQQKELALQDYNKTIELNSNS 954



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 116/591 (19%), Positives = 242/591 (40%), Gaps = 80/591 (13%)

Query: 75  RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
           RA   + +   +  + D +K ++LDP   Q Y  +G     L + EEALS     Y  A+
Sbjct: 196 RAELLTDMNKKEEALVDYNKTIELDPKKAQTYECRGILLKQLEKYEEALS----DYNMAI 251

Query: 135 HQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHN- 193
             +  + ++   + LL     ++             +L      ++ N K ++  +N   
Sbjct: 252 KLNPKVYKWFYFQGLLFKVLNEKE-----------KALEEYNQAISVNPKFAKAYKNRAI 300

Query: 194 -KSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSE 252
              +I  +     D ++    +  D  +   R      G  + + K  L     L+++ +
Sbjct: 301 LYKEIDQNDKALSDYTKILELNPKDEKIYQFR------GKKLVLIKGNL-----LKQLGQ 349

Query: 253 NHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLS 312
           N     D +K+        EIN   ++++      + +A++ ++ G+    T D +DK+ 
Sbjct: 350 NELALQDYTKTI-------EINPNDTENY------VRRATLYKQLGQNDLATKD-YDKI- 394

Query: 313 SDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTR 372
                L     NS  Y K ++                     L+E      +  +  +T 
Sbjct: 395 -----LEIEPKNSNVYYKKAL--------------------FLEEL-----QQNELAITL 424

Query: 373 ISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           ++++  ++    +  L RG       +   A++ + + ++ +P    AL+ R        
Sbjct: 425 LNQAIQLNPQDANLYLKRGDLNKLTNQLDMAVNDYSKAIEINPNNEVALLNRALLFKQLN 484

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + E A  DF   ++ N +   A+  RG     L +   A+QD +K ++ +P    + + R
Sbjct: 485 QTERAFQDFHRILEINHNHLNAYHHRGNLYKELNQDELALQDFNKIIQIDPKIVIVYYNR 544

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLD 547
             +  K +  + A++DL+  V+LD   K  YT +  G+   ++ E  KA   + KAI+++
Sbjct: 545 AKIYQKQQKNDLALQDLNVAVELDP--KITYTLVERGILYYNMNEKDKALNDYNKAIEIN 602

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
               +A  +L    + L  +++AL+   +   +D+    AYH R +L + L + +KA+ D
Sbjct: 603 PRCYDAHVNLGNLLKSLDQNQQALDSYNKAAELDQNNYLAYHNRAILWNKLNEKEKALAD 662

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
               + ++P +      RAS    + +   AI D+  +L +      +F+ 
Sbjct: 663 FDKAILLNPKSAVSYSSRASLLSDMNQKDRAIDDFTKSLQINPKQRIQFIF 713



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 126/279 (45%), Gaps = 8/279 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
            K   A+  +++ ++ DP   +    RG       + E A+SD+  AI+ NP   + +  
Sbjct: 204 NKKEEALVDYNKTIELDPKKAQTYECRGILLKQLEKYEEALSDYNMAIKLNPKVYKWFYF 263

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G     L E  +A+++ ++A+   P  A     R I+  +    + A+ D +  ++L+ 
Sbjct: 264 QGLLFKVLNEKEKALEEYNQAISVNPKFAKAYKNRAILYKEIDQNDKALSDYTKILELNP 323

Query: 515 ENKSAYTYLGLA--------LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +++  Y + G          L  +G+ + A + + K I+++ N  E +      Y+ L  
Sbjct: 324 KDEKIYQFRGKKLVLIKGNLLKQLGQNELALQDYTKTIEINPNDTENYVRRATLYKQLGQ 383

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           ++ A +   ++L I+ + S  Y+ + L L  L Q++ AI  L+  + ++P +      R 
Sbjct: 384 NDLATKDYDKILEIEPKNSNVYYKKALFLEELQQNELAITLLNQAIQLNPQDANLYLKRG 443

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                  +   A+ DY  A+++  ++    + + L F Q
Sbjct: 444 DLNKLTNQLDMAVNDYSKAIEINPNNEVALLNRALLFKQ 482



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 113/239 (47%), Gaps = 1/239 (0%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           DP     L+ RG       E + A++D+ +AI+ NP   +A    G    +L ++ +A+ 
Sbjct: 568 DPKITYTLVERGILYYNMNEKDKALNDYNKAIEINPRCYDAHVNLGNLLKSLDQNQQALD 627

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
             +KA E + N+    H R I+  K  +   A+ D    + L+ ++  +Y+     LS +
Sbjct: 628 SYNKAAELDQNNYLAYHNRAILWNKLNEKEKALADFDKAILLNPKSAVSYSSRASLLSDM 687

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
            +  +A +   K++Q++      +  L   ++      +A++   + + I+   +  Y  
Sbjct: 688 NQKDRAIDDFTKSLQINPKQRIQFIFLGNLHKQKQQISQAIQDYTEAININPNQADYYVS 747

Query: 591 RGLLLHGLG-QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           RG +L     +H+KA++D +  + I P++    Y RA  Y +I +   AI D + ++++
Sbjct: 748 RGNILQDPAKEHEKALQDYNKAIEIAPNSFISYYQRALLYRSIDKIELAIADCNKSIEI 806



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 7/191 (3%)

Query: 395  GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
             K   AI+ +++ L  +P    AL+ RG A    +  + A++DFT+ I+  P+    +  
Sbjct: 833  NKPQDAIAEYNKALIINPTCTSALLKRGDAYDLMKNHQEALNDFTKVIEIIPNESGGYSS 892

Query: 455  RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            R      L +  EA+QD +KA+E  P  A   + R I   + +    A++D +  ++L+ 
Sbjct: 893  RAPLLMKLAQKEEALQDYNKAIEVNPGEAANYYNRAIYYNQVQQKELALQDYNKTIELNS 952

Query: 515  ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHLTQFYQDLANSEKAL 571
             +  AY    L L SIG   +A +  L A +L   +  FL   G   ++Y D    EKA 
Sbjct: 953  NSYLAYNNRALLLQSIGRKDEALQDVLNANRLCPDNPLFLANLG--DRYYSD-QQFEKAT 1009

Query: 572  ECLQQV-LYID 581
               +Q   YID
Sbjct: 1010 HYYKQAQFYID 1020



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 134/330 (40%), Gaps = 59/330 (17%)

Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
           +E SN+AK           KS+++  +  L   + +VNE             LK +  Y 
Sbjct: 14  EELSNKAK-------DHFEKSQTLHQNQVLDDALNEVNEA------------LKINSNYS 54

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           EAL  +      + + + A+ +  +AIQ NP   EA+  R            A+ D    
Sbjct: 55  EALNLKAEILVKKGDTKQALEEVNKAIQLNPQLKEAYYNRALIFRKNKAYNLALNDAEMY 114

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
            + +P S   ++ +GI+  +      A+      ++LD+ N  A+   GL L ++   KK
Sbjct: 115 YQLDPQSTKTINFKGIIMKESGSQQEALAVFQKTIELDQMNYPAHYQSGLILRAL---KK 171

Query: 536 AEEAHL---KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
            E+A L   KAI++     +A+    +   D+   E+AL    + + +D + ++ Y  RG
Sbjct: 172 EEDALLEFNKAIEIRPTSSDAYFERAELLTDMNKKEEALVDYNKTIELDPKKAQTYECRG 231

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL---------------------------- 624
           +LL  L ++++A+ D +  + ++P   +  Y                             
Sbjct: 232 ILLKQLEKYEEALSDYNMAIKLNPKVYKWFYFQGLLFKVLNEKEKALEEYNQAISVNPKF 291

Query: 625 ------RASCYHAIGEYREAIKDYDAALDL 648
                 RA  Y  I +  +A+ DY   L+L
Sbjct: 292 AKAYKNRAILYKEIDQNDKALSDYTKILEL 321



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/278 (21%), Positives = 122/278 (43%), Gaps = 19/278 (6%)

Query: 382  DFRLSRG-IAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAI 435
            D+ +SRG I Q    ++  A+  +++ ++  P      Y  AL+ R   +     +E AI
Sbjct: 743  DYYVSRGNILQDPAKEHEKALQDYNKAIEIAPNSFISYYQRALLYRSIDK-----IELAI 797

Query: 436  SDFTEAIQSNPSAGEAWKRRGQ--------ARAALGESVEAIQDLSKALEFEPNSADILH 487
            +D  ++I+ NP     +  +G             L +  +AI + +KAL   P     L 
Sbjct: 798  ADCNKSIEINPKNELPYIVKGNFDLLILGLIFKELNKPQDAIAEYNKALIINPTCTSALL 857

Query: 488  ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +RG      K+   A+ D +  +++       Y+     L  + + ++A + + KAI+++
Sbjct: 858  KRGDAYDLMKNHQEALNDFTKVIEIIPNESGGYSSRAPLLMKLAQKEEALQDYNKAIEVN 917

Query: 548  RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
                  + +   +Y  +   E AL+   + + ++     AY+ R LLL  +G+  +A++D
Sbjct: 918  PGEAANYYNRAIYYNQVQQKELALQDYNKTIELNSNSYLAYNNRALLLQSIGRKDEALQD 977

Query: 608  LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            + +   + P N   L      Y++  ++ +A   Y  A
Sbjct: 978  VLNANRLCPDNPLFLANLGDRYYSDQQFEKATHYYKQA 1015



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 55/272 (20%), Positives = 120/272 (44%), Gaps = 11/272 (4%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RGI   N  +   A++ +++ ++ +P   +A +  G       + + A+  + +A + 
Sbjct: 576 VERGILYYNMNEKDKALNDYNKAIEINPRCYDAHVNLGNLLKSLDQNQQALDSYNKAAEL 635

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           + +   A+  R      L E  +A+ D  KA+   P SA     R  +       + A++
Sbjct: 636 DQNNYLAYHNRAILWNKLNEKEKALADFDKAILLNPKSAVSYSSRASLLSDMNQKDRAID 695

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++++ + +  + +LG       +  +A + + +AI ++ N  + +       QD 
Sbjct: 696 DFTKSLQINPKQRIQFIFLGNLHKQKQQISQAIQDYTEAININPNQADYYVSRGNILQDP 755

Query: 565 ANS-EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           A   EKAL+   + + I      +Y+ R LL   + + + AI D +  + I+P N E  Y
Sbjct: 756 AKEHEKALQDYNKAIEIAPNSFISYYQRALLYRSIDKIELAIADCNKSIEINPKN-ELPY 814

Query: 624 LRAS---------CYHAIGEYREAIKDYDAAL 646
           +             +  + + ++AI +Y+ AL
Sbjct: 815 IVKGNFDLLILGLIFKELNKPQDAIAEYNKAL 846



 Score = 43.5 bits (101), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 11/122 (9%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIEL-----AKLCSLRNWSKAIRILDSLLAQSY 67
           L K    + E ++ + +    + A   R EL      K  +L +++K I  LD   AQ+Y
Sbjct: 169 LKKEEDALLEFNKAIEIRPTSSDAYFERAELLTDMNKKEEALVDYNKTIE-LDPKKAQTY 227

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
           E    C R     QLE ++  + D + A++L+P + + +  +G  F  L  KE+AL  + 
Sbjct: 228 E----C-RGILLKQLEKYEEALSDYNMAIKLNPKVYKWFYFQGLLFKVLNEKEKALEEYN 282

Query: 128 KG 129
           + 
Sbjct: 283 QA 284



 Score = 40.4 bits (93), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 46/227 (20%), Positives = 97/227 (42%), Gaps = 41/227 (18%)

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------- 554
           A+ +++  +K++     A       L   G+ K+A E   KAIQL+    EA+       
Sbjct: 39  ALNEVNEALKINSNYSEALNLKAEILVKKGDTKQALEEVNKAIQLNPQLKEAYYNRALIF 98

Query: 555 ----------GHLTQFYQ-----------------DLANSEKALECLQQVLYIDKRFSKA 587
                          +YQ                 +  + ++AL   Q+ + +D+    A
Sbjct: 99  RKNKAYNLALNDAEMYYQLDPQSTKTINFKGIIMKESGSQQEALAVFQKTIELDQMNYPA 158

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           ++  GL+L  L + + A+ + +  + I P++ +  + RA     + +  EA+ DY+  ++
Sbjct: 159 HYQSGLILRALKKEEDALLEFNKAIEIRPTSSDAYFERAELLTDMNKKEEALVDYNKTIE 218

Query: 648 LELDSMEKF-----VLQCLAFYQKEIALYT-ASKINSE-FCWFDIDG 687
           L+    + +     +L+ L  Y++ ++ Y  A K+N + + WF   G
Sbjct: 219 LDPKKAQTYECRGILLKQLEKYEEALSDYNMAIKLNPKVYKWFYFQG 265


>gi|300870120|ref|YP_003784991.1| hypothetical protein BP951000_0487 [Brachyspira pilosicoli 95/1000]
 gi|300687819|gb|ADK30490.1| tetratricopeptide repeat family protein [Brachyspira pilosicoli
           95/1000]
          Length = 420

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 176/352 (50%), Gaps = 5/352 (1%)

Query: 321 SNTNSESYSKSSISDNKSSDSTESRSK-LSFKWDMLKETSNEAKRNKKFCVTRISKSKSI 379
           +N ++E+YS     + ++    E  +K +S K   +   +N    NK+  + R++     
Sbjct: 39  NNIDAENYSDFDDFNERAKAFNEELNKIMSDKKHFIVSFTNIVDNNKEVDIDRLNNLTDY 98

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
             D+  S+GI +   G+YA AI  +D+ +K +P   +A   +  A+     L+ AI ++ 
Sbjct: 99  H-DYN-SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYD 156

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI+       A+  RG  ++ LG   EAI+D  KAL  +PN  D  + +G++  +    
Sbjct: 157 KAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFS 216

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A++D +  +KL+     AY   G A  ++G Y++A + + KAI+L+ N+  A+ +   
Sbjct: 217 KEAIKDFNKAIKLNPNYALAYNNRGTAKDNLGLYEEAIKDYNKAIKLNPNYALAYNNRGN 276

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +L   E+A+E   + + +    + AY+ RG   + L  +++AIKD    + ++P+  
Sbjct: 277 AKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNAKYNLELYEEAIKDYDKTIKLNPNYA 336

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
                R +    +G Y EAI+D+D A+ L  D ++ +      F ++ + LY
Sbjct: 337 FAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAY--NNRGFTKENLGLY 386



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 122/239 (51%), Gaps = 7/239 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR---AFQRELEAAISDFTEAI 442
           +RG+ + + G    AI  FD+ L  DP   +A   +G       F +E   AI DF +AI
Sbjct: 171 NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKE---AIKDFNKAI 227

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + NP+   A+  RG A+  LG   EAI+D +KA++  PN A   + RG        +  A
Sbjct: 228 KLNPNYALAYNNRGTAKDNLGLYEEAIKDYNKAIKLNPNYALAYNNRGNAKDNLGLYEEA 287

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +ED    +KL  +N  AY   G A  ++  Y++A + + K I+L+ N+  A+ +      
Sbjct: 288 IEDFDKAIKLKPDNTDAYNNRGNAKYNLELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKD 347

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           +L   E+A+E   + + ++  +  AY+ RG     LG +++A KD    L +DPSN EC
Sbjct: 348 NLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGLYEEAFKDYKKALELDPSN-EC 405



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 135/269 (50%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D   ++ IA+   G    AI  +D+ ++    Y  A   RG  ++    LE AI DF +
Sbjct: 132 ADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDK 191

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+  +P+  +A+  +G     LG S EAI+D +KA++  PN A   + RG        + 
Sbjct: 192 ALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKAIKLNPNYALAYNNRGTAKDNLGLYE 251

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A++D +  +KL+     AY   G A  ++G Y++A E   KAI+L  +  +A+ +    
Sbjct: 252 EAIKDYNKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNA 311

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
             +L   E+A++   + + ++  ++ AY+ RG     LG +++AI+D    + ++P  ++
Sbjct: 312 KYNLELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVD 371

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLE 649
               R      +G Y EA KDY  AL+L+
Sbjct: 372 AYNNRGFTKENLGLYEEAFKDYKKALELD 400



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 67/134 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ N G Y  AI  FD+ +K  P   +A   RG A+      E AI D+ + I+ N
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKAIKLKPDNTDAYNNRGNAKYNLELYEEAIKDYDKTIKLN 332

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG A+  LG   EAI+D  KA++  P+  D  + RG        +  A +D
Sbjct: 333 PNYAFAYNNRGNAKDNLGLYEEAIEDFDKAIKLNPDYVDAYNNRGFTKENLGLYEEAFKD 392

Query: 506 LSACVKLDKENKSA 519
               ++LD  N+ A
Sbjct: 393 YKKALELDPSNECA 406



 Score = 46.6 bits (109), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 11/117 (9%)

Query: 18  KTICEIDELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDI 72
           + I   DE ++++  MA A      A+ +L  L  ++  + KAI +        Y     
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYTYAYY----- 170

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
            NR    S L L +  I+D DKAL +DP L  AY  KG     LG  +EA+  + K 
Sbjct: 171 -NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFSKEAIKDFNKA 226



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 31/56 (55%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           NR      LEL++  I+D DK ++L+P    AY  +G A   LG  EEA+  ++K 
Sbjct: 307 NRGNAKYNLELYEEAIKDYDKTIKLNPNYAFAYNNRGNAKDNLGLYEEAIEDFDKA 362


>gi|291569640|dbj|BAI91912.1| serine/threonine protein kinase containing TPR domain [Arthrospira
           platensis NIES-39]
          Length = 732

 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 13/284 (4%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T+  K    + D   +R +A    G + +AI+  +Q+++ +P   +A   RG A   Q  
Sbjct: 401 TQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQEN 460

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            EAAI D+TE I+  P   EA++ RG A    G     + D ++A+   P SA   + RG
Sbjct: 461 YEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQSAAAYYNRG 520

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
              F   D+  A+ D +  +  + +N  AY     TY+ L     G Y+ A E+  ++IQ
Sbjct: 521 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 575

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
           L+   ++ + +    Y ++ N + A+    + + ++   SKA+  RG L+H L + ++ A
Sbjct: 576 LNPTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAEDYEAA 633

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           I D S  + ++P++ E    RA  +  +G Y +AI DY  A+ +
Sbjct: 634 IADYSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYAQAIRI 677



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/276 (25%), Positives = 131/276 (47%), Gaps = 1/276 (0%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA            +F  + + DP+  EA + RG  R    + EAAI  F  +IQ  P 
Sbjct: 316 GIAATGLVGLMVIFGLFQVLNRPDPVKSEAALKRGVERLEAGDPEAAIKAFNRSIQLFPD 375

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA+++R  A   L +  +AI D ++A++ +P + DI   R +   +  DF  A+ DL+
Sbjct: 376 NSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLN 435

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+ E+  A+   GLA  +   Y+ A   + + I+   +  EA+      +    N 
Sbjct: 436 QVIRLNPEDTDAFYQRGLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNL 495

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +  +    + + ++ + + AY+ RG     LG ++ A+ D +  +  +P N E    R S
Sbjct: 496 QAGMADYTEAIRLNPQSAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCS 555

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            Y  +G Y  AI+    ++ L   +M+ +  +C+A+
Sbjct: 556 TYINLGNYEAAIESCSRSIQLNPTAMD-YNNRCIAY 590



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 1/261 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  AI+ + Q +K DP  P+    R  A     +   AI+D  + I+ NP   +A+ +R
Sbjct: 392 KYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQR 451

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A         AI D ++ +  +P+ ++    RG  + K  +  A + D +  ++L+ +
Sbjct: 452 GLAHYTQENYEAAILDYTEVIRRQPDHSEAYRARGSAHVKAGNLQAGMADYTEAIRLNPQ 511

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           + +AY   G A   +G+Y+ A   + + I  + +  EA+G+    Y +L N E A+E   
Sbjct: 512 SAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCS 571

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + ++   +  Y+ R +    +  +  AI D +  + ++P+N +    R   +    +Y
Sbjct: 572 RSIQLNPT-AMDYNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDY 630

Query: 636 REAIKDYDAALDLELDSMEKF 656
             AI DY  A+ L  +  E +
Sbjct: 631 EAAIADYSQAISLNPNDAESY 651



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 66/127 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R IA +N   Y +AI    + ++ +P   +A   RG   +   + EAAI+D+++AI  N
Sbjct: 585 NRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLN 644

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  E++  R QA A LG   +AI D ++A+   PN A   + RG+V     D   A+ D
Sbjct: 645 PNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 704

Query: 506 LSACVKL 512
                KL
Sbjct: 705 FEQAGKL 711



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ + G Y  A++ ++Q++  +P   EA   R +        EAAI   + +IQ N
Sbjct: 518 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 577

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+A + +  R  A   +     AI D +KA+E EPN++     RG+V+   +D+ AA+ D
Sbjct: 578 PTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIAD 636

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            S  + L+  +  +Y+    A + +G Y +A   + +AI++  N   A+
Sbjct: 637 YSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYAQAIRIRPNLAGAF 685



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 54/103 (52%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + E A++   + + +    S+A+  R    + L ++++AI D +  + +DP+N +  + 
Sbjct: 357 GDPEAAIKAFNRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 416

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           R+  YH +G++  AI D +  + L  +  + F  + LA Y +E
Sbjct: 417 RSLAYHQMGDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYTQE 459



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 1/145 (0%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           +N G Y +AI    + ++ +P   +    R  A    +  +AAI D T+AI+  P+  +A
Sbjct: 558 INLGNYEAAIESCSRSIQLNPTAMD-YNNRCIAYLNVQNYDAAIGDCTKAIELEPNNSKA 616

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
              RG   +   +   AI D S+A+   PN A+    R   + +  +++ A+ D +  ++
Sbjct: 617 HSNRGLVHSLAEDYEAAIADYSQAISLNPNDAESYSNRAQAHAELGNYSQAIADYAQAIR 676

Query: 512 LDKENKSAYTYLGLALSSIGEYKKA 536
           +      A+   G+  +S+G+ + A
Sbjct: 677 IRPNLAGAFYGRGMVRASLGDRRGA 701


>gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 1491

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 125/266 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+     G+   A++ FDQ +   P Y  A   RG A       E A+++F +AI   
Sbjct: 521 NRGVVLFELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQ 580

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW +RG A   LG   EA+ +  + +  +P+      +RG+  FK      A+ +
Sbjct: 581 PDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTN 640

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L  ++ SA+   G+ L  +G +++A     +AI L  ++ + W +       L 
Sbjct: 641 FDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALFKLG 700

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+AL    QV+ +   + +A+  RG++L  LG+HK+A+ +    + + P +    + R
Sbjct: 701 RYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNR 760

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
                 +G Y EA+  YD  + L+ D
Sbjct: 761 GVLLGELGRYEEALTSYDQVISLQPD 786



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 144/306 (47%), Gaps = 4/306 (1%)

Query: 361  EAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
            E  R+K+  +T   +  S+  D+  +   RG+     G++  A++ FDQ++   P    A
Sbjct: 800  ELGRHKE-ALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALANFDQVISLQPDDYHA 858

Query: 418  LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
               RG A       E A+++F +AI   P    AW  RG A   LG   EA+ +  +A+ 
Sbjct: 859  WFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAIS 918

Query: 478  FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
             +P+       RG++  K   +  A+ +    + L  +   A+   G+ALS +G Y++A 
Sbjct: 919  LQPDYYPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEAL 978

Query: 538  EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
                +AI L  ++ + W +       L   E+AL  L Q + +   + +A+  R  +L  
Sbjct: 979  ANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSN 1038

Query: 598  LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
            LG++++A+      + + P + +  + R +    +G Y EA+ ++D A+ L  D  + ++
Sbjct: 1039 LGRYREALTSDDQVISLQPDDYQAWHNRGAALGELGRYEEALANFDQAISLRPDDYQDWL 1098

Query: 658  LQCLAF 663
             + +A 
Sbjct: 1099 NRGIAL 1104



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 125/267 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG+A    G++  A++ FDQ++   P    A   RG         E A+++F +AI  
Sbjct: 622 FKRGVALFKLGRHEEALTNFDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISL 681

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   + W  RG A   LG   EA+ +  + +  +P+       RG+V  +      A+ 
Sbjct: 682 QPDYYQTWDNRGAALFKLGRYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHKEALA 741

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           +    + L  ++ SA+   G+ L  +G Y++A  ++ + I L  +   AW +      +L
Sbjct: 742 NFDQVISLQPDDSSAWFNRGVLLGELGRYEEALTSYDQVISLQPDDSSAWFNRGVLLGEL 801

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++AL    QV+ +   +  A+  RG++L  LG+HK+A+ +    + + P +    + 
Sbjct: 802 GRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALANFDQVISLQPDDYHAWFK 861

Query: 625 RASCYHAIGEYREAIKDYDAALDLELD 651
           R      +G Y EA+ ++D A+ L+ D
Sbjct: 862 RGVALGELGRYEEALANFDQAISLQPD 888



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 134/316 (42%), Gaps = 7/316 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG+A    G++  A++ FDQ++   P    A   RG A       E A+++F + I  
Sbjct: 588 FKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISL 647

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    AW  RG     LG   EA+ +  +A+  +P+       RG   FK   +  A+ 
Sbjct: 648 QPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALA 707

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           +    + L  +   A+   G+ L  +G +K+A     + I L  +   AW +      +L
Sbjct: 708 NFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGEL 767

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+AL    QV+ +    S A+  RG+LL  LG+HK+A+      + + P        
Sbjct: 768 GRYEEALTSYDQVISLQPDDSSAWFNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDN 827

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           R      +G ++EA+ ++D  + L+ D          A++++ +AL    +       FD
Sbjct: 828 RGVVLGELGRHKEALANFDQVISLQPDDYH-------AWFKRGVALGELGRYEEALANFD 880

Query: 685 IDGDIDPLFKEYWCKR 700
               + P F   W  R
Sbjct: 881 QAISLQPDFYPAWDNR 896



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 132/297 (44%), Gaps = 7/297 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A    G+   A++ FDQ++   P Y  A   RG A       E A+++F + I   P 
Sbjct: 353 GVALGELGRNEEALASFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPD 412

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              AW  RG A   LG   EA+ +  + +  +P+       RG   FK      A+    
Sbjct: 413 YYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRNEEALASFD 472

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + L  ++  A+   G+AL  +G  ++A  +  + I L  ++  AW +      +L  +
Sbjct: 473 QVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGVVLFELGRN 532

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+AL    Q + +   +S A++ RG  L  LG+H++A+ +    + + P +    + R  
Sbjct: 533 EEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQPDDYHAWFKRGV 592

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
               +G + EA+ ++D  + L+ D          A++++ +AL+   +       FD
Sbjct: 593 ALFKLGRHEEALTNFDQVISLQPDDYH-------AWFKRGVALFKLGRHEEALTNFD 642



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 170/395 (43%), Gaps = 21/395 (5%)

Query: 309 DKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKF 368
           +KL+   A L  S  N ES   S+        ST S ++  F   +   T  E  R ++ 
Sbjct: 146 EKLNQLLAGLKGSGYNQESVPVSN-------SSTVSGAEFWFNQGV---TLYELGRYEE- 194

Query: 369 CVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            + +  ++ S+  D+     +RG   +  G++  A++ FD+ +   P Y +A  GRG   
Sbjct: 195 ALAKFDQAISLQPDYYHPWDNRGGVLIKLGRHKEALASFDRAISLQPDYYQAWRGRGVVL 254

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                 + A+++  +AI   P   + W  RG A   LG   EA+ +  +A+  +P+ +  
Sbjct: 255 GMLGRHKEALANLDQAISLQPDFYKTWDNRGAALGELGRYEEALANFDQAISLQPDDSSA 314

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG+V FK      A+      + L  ++  A+  LG+AL  +G  ++A  +  + I 
Sbjct: 315 WNNRGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALASFDQVIS 374

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           L  ++  AW +       L   E+AL    QV+ +   +  A+  RG  L  LG++++A+
Sbjct: 375 LQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEAL 434

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            +    + + P        R +    +G   EA+  +D  + L+ D          A+++
Sbjct: 435 ANFDQVISLQPDYYPAWDNRGAALFKLGRNEEALASFDQVISLQPDDYH-------AWFK 487

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           + +AL    +       FD    + P +   W  R
Sbjct: 488 RGVALGELGRNEEALASFDQVISLQPDYYPAWDNR 522



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 126/272 (46%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             +RG+     G++  A++ +DQ++   P Y  A   RG         + A+++F + I  
Sbjct: 792  FNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALANFDQVISL 851

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             P    AW +RG A   LG   EA+ +  +A+  +P+       RG+   +      A+ 
Sbjct: 852  QPDDYHAWFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALA 911

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            +    + L  +   A+   G+ L  +G Y++A     +AI L  +F +AW        +L
Sbjct: 912  NFDQAISLQPDYYPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSEL 971

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               E+AL    Q + +   + + +  RGL+L  LG++++A+ +L   + + P   +  + 
Sbjct: 972  GRYEEALANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFN 1031

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            R++    +G YREA+   D  + L+ D  + +
Sbjct: 1032 RSAMLSNLGRYREALTSDDQVISLQPDDYQAW 1063



 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 137/307 (44%), Gaps = 8/307 (2%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG+     G++  A++ FDQ++   P    A   RG         E A++ + + I   
Sbjct: 725  NRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGELGRYEEALTSYDQVISLQ 784

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    AW  RG     LG   EA+    + +  +P+       RG+V  +      A+ +
Sbjct: 785  PDDSSAWFNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELGRHKEALAN 844

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                + L  ++  A+   G+AL  +G Y++A     +AI L  +F  AW +      +L 
Sbjct: 845  FDQVISLQPDDYHAWFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELG 904

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              E+AL    Q + +   +  A+  RG++L  LG++++A+ +    + + P   +    +
Sbjct: 905  RHEEALANFDQAISLQPDYYPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGK 964

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIA-LYTASKINSE 679
                  +G Y EA+ ++D A+ L+ D  + +     VL  L  Y++ +A L  A  +  +
Sbjct: 965  GVALSELGRYEEALANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAISLQPD 1024

Query: 680  F--CWFD 684
            +   WF+
Sbjct: 1025 YYQAWFN 1031



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 136/312 (43%), Gaps = 7/312 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+     G++  A++ FDQ +   P Y +    RG A       E A+++F + I   
Sbjct: 657 NRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALFKLGRYEEALANFDQVISLQ 716

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG     LG   EA+ +  + +  +P+ +     RG++  +   +  A+  
Sbjct: 717 PDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAWFNRGVLLGELGRYEEALTS 776

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L  ++ SA+   G+ L  +G +K+A  ++ + I L  ++  AW +      +L 
Sbjct: 777 YDQVISLQPDDSSAWFNRGVLLGELGRHKEALTSYDQVISLQPDYYPAWDNRGVVLGELG 836

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++AL    QV+ +      A+  RG+ L  LG++++A+ +    + + P        R
Sbjct: 837 RHKEALANFDQVISLQPDDYHAWFKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNR 896

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                 +G + EA+ ++D A+ L+ D          A+  + + L    +       FD 
Sbjct: 897 GVALGELGRHEEALANFDQAISLQPDYYP-------AWDNRGVMLIKLGRYEEALANFDQ 949

Query: 686 DGDIDPLFKEYW 697
              + P F + W
Sbjct: 950 AISLQPDFYQAW 961



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 135/303 (44%), Gaps = 4/303 (1%)

Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
           WD       E  RN++  +    ++ S+  D+  +   RG A    G++  A++ FDQ +
Sbjct: 519 WDNRGVVLFELGRNEE-ALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAI 577

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
              P    A   RG A       E A+++F + I   P    AW +RG A   LG   EA
Sbjct: 578 SLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEA 637

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           + +  + +  +P+ +     RG+V  +      A+ +    + L  +    +   G AL 
Sbjct: 638 LTNFDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRGAALF 697

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G Y++A     + I L  ++ +AW +      +L   ++AL    QV+ +    S A+
Sbjct: 698 KLGRYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHKEALANFDQVISLQPDDSSAW 757

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             RG+LL  LG++++A+      + + P +    + R      +G ++EA+  YD  + L
Sbjct: 758 FNRGVLLGELGRYEEALTSYDQVISLQPDDSSAWFNRGVLLGELGRHKEALTSYDQVISL 817

Query: 649 ELD 651
           + D
Sbjct: 818 QPD 820



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 4/303 (1%)

Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
           W  L     E  RN++  +    +  S+  D+  +   RG A    G+Y  A++ FDQ++
Sbjct: 349 WFKLGVALGELGRNEE-ALASFDQVISLQPDYYPAWDNRGAALFKLGRYEEALANFDQVI 407

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
              P Y  A   RG A       E A+++F + I   P    AW  RG A   LG + EA
Sbjct: 408 SLQPDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRNEEA 467

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           +    + +  +P+      +RG+   +      A+      + L  +   A+   G+ L 
Sbjct: 468 LASFDQVISLQPDDYHAWFKRGVALGELGRNEEALASFDQVISLQPDYYPAWDNRGVVLF 527

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G  ++A     +AI L  ++  AW +       L   E+AL    Q + +      A+
Sbjct: 528 ELGRNEEALANFDQAISLQPDYSSAWNNRGAALFKLGRHEEALTNFDQAISLQPDDYHAW 587

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             RG+ L  LG+H++A+ +    + + P +    + R      +G + EA+ ++D  + L
Sbjct: 588 FKRGVALFKLGRHEEALTNFDQVISLQPDDYHAWFKRGVALFKLGRHEEALTNFDQVISL 647

Query: 649 ELD 651
           + D
Sbjct: 648 QPD 650



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 134/315 (42%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+     G+   A++ FDQ++   P    A    G A       E A++ F + I   
Sbjct: 317 NRGVVLFKLGRNEEALASFDQVISLQPDDYHAWFKLGVALGELGRNEEALASFDQVISLQ 376

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG A   LG   EA+ +  + +  +P+       RG   FK   +  A+ +
Sbjct: 377 PDYYPAWDNRGAALFKLGRYEEALANFDQVISLQPDYYPAWDNRGAALFKLGRYEEALAN 436

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L  +   A+   G AL  +G  ++A  +  + I L  +   AW        +L 
Sbjct: 437 FDQVISLQPDYYPAWDNRGAALFKLGRNEEALASFDQVISLQPDDYHAWFKRGVALGELG 496

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +E+AL    QV+ +   +  A+  RG++L  LG++++A+ +    + + P        R
Sbjct: 497 RNEEALASFDQVISLQPDYYPAWDNRGVVLFELGRNEEALANFDQAISLQPDYSSAWNNR 556

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            +    +G + EA+ ++D A+ L+ D          A++++ +AL+   +       FD 
Sbjct: 557 GAALFKLGRHEEALTNFDQAISLQPDDYH-------AWFKRGVALFKLGRHEEALTNFDQ 609

Query: 686 DGDIDPLFKEYWCKR 700
              + P     W KR
Sbjct: 610 VISLQPDDYHAWFKR 624



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 123/272 (45%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
              RG+A    G+Y  A++ FDQ +   P +  A   RG A       E A+++F +AI  
Sbjct: 860  FKRGVALGELGRYEEALANFDQAISLQPDFYPAWDNRGVALGELGRHEEALANFDQAISL 919

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             P    AW  RG     LG   EA+ +  +A+  +P+       +G+   +   +  A+ 
Sbjct: 920  QPDYYPAWDNRGVMLIKLGRYEEALANFDQAISLQPDFYQAWRGKGVALSELGRYEEALA 979

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            +    + L  +    +   GL L  +G Y++A     +AI L  ++ +AW + +    +L
Sbjct: 980  NFDQAISLQPDYYQTWDNRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSNL 1039

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
                +AL    QV+ +     +A+H RG  L  LG++++A+ +    + + P + +    
Sbjct: 1040 GRYREALTSDDQVISLQPDDYQAWHNRGAALGELGRYEEALANFDQAISLRPDDYQDWLN 1099

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            R      +G + EA+   D A+ L+ D  + +
Sbjct: 1100 RGIALGELGRHEEALASCDQAISLQPDYYQAW 1131



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 109/245 (44%), Gaps = 4/245 (1%)

Query: 352  WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
            WD       E  R+++  +    ++ S+  D+  +   RG+  +  G+Y  A++ FDQ +
Sbjct: 893  WDNRGVALGELGRHEE-ALANFDQAISLQPDYYPAWDNRGVMLIKLGRYEEALANFDQAI 951

Query: 409  KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
               P + +A  G+G A +     E A+++F +AI   P   + W  RG     LG   EA
Sbjct: 952  SLQPDFYQAWRGKGVALSELGRYEEALANFDQAISLQPDYYQTWDNRGLVLIKLGRYEEA 1011

Query: 469  IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
            + +L +A+  +P+       R  +      +  A+      + L  ++  A+   G AL 
Sbjct: 1012 LANLDQAISLQPDYYQAWFNRSAMLSNLGRYREALTSDDQVISLQPDDYQAWHNRGAALG 1071

Query: 529  SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
             +G Y++A     +AI L  +  + W +      +L   E+AL    Q + +   + +A+
Sbjct: 1072 ELGRYEEALANFDQAISLRPDDYQDWLNRGIALGELGRHEEALASCDQAISLQPDYYQAW 1131

Query: 589  HLRGL 593
              RG+
Sbjct: 1132 SNRGV 1136



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 3/166 (1%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQS 444
            +RG+  +  G+Y  A++  DQ +   P Y +A   R    +   R  EA  SD  + I  
Sbjct: 997  NRGLVLIKLGRYEEALANLDQAISLQPDYYQAWFNRSAMLSNLGRYREALTSD-DQVISL 1055

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             P   +AW  RG A   LG   EA+ +  +A+   P+       RGI   +      A+ 
Sbjct: 1056 QPDDYQAWHNRGAALGELGRYEEALANFDQAISLRPDDYQDWLNRGIALGELGRHEEALA 1115

Query: 505  DLSACVKLDKENKSAYTYLGL-ALSSIGEYKKAEEAHLKAIQLDRN 549
                 + L  +   A++  G+ A+ S G     ++      +L+RN
Sbjct: 1116 SCDQAISLQPDYYQAWSNRGVAAMESFGYEYFWQQNFTDCFRLERN 1161


>gi|359461182|ref|ZP_09249745.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 595

 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 14/273 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A V+ G+Y  A+  FD+ LK  P YPE    RG A     +   AIS F  A+  N
Sbjct: 303 NRGVALVDLGRYTEAVESFDKALKYRPDYPELWNNRGVAFENLGQYAEAISSFDRALAIN 362

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  +A   RG A   L +  +AI   +K +E +P+     + +G+  F    +  A+E 
Sbjct: 363 SNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAWYNKGVALFNLGMYEEALES 422

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
               ++++     A+T+ G  L  +G Y++A  ++ KA+++  +  E W       GHL 
Sbjct: 423 WEQTIEIEPNFHEAWTHRGSVLGHLGLYEEAITSYNKALKIKPDLYETWNKRGIALGHLD 482

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           Q       +++A+    + L I   F +A++ RG  L  +G+HK+A+ + +  L + P++
Sbjct: 483 Q-------NKEAISSFDKTLEIKPDFYEAWNNRGAALDNIGRHKEAVSNYNKALELKPND 535

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
               Y +A CY       +AI+    A+ L  D
Sbjct: 536 PMIFYNKACCYALQSNTEDAIEYLSLAIALAPD 568



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 129/290 (44%), Gaps = 34/290 (11%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           E  Y SAI  +DQ L   P Y +A   RG A       + A++   +A++  PS  EAW 
Sbjct: 243 EADYQSAIRAYDQALNFKPNYHQAWYNRGIAYNHLEMHQEAVASCDKALELQPSKYEAWN 302

Query: 454 RRGQARAALGESVEAIQDLSKALEFEP--------------------------------N 481
            RG A   LG   EA++   KAL++ P                                N
Sbjct: 303 NRGVALVDLGRYTEAVESFDKALKYRPDYPELWNNRGVAFENLGQYAEAISSFDRALAIN 362

Query: 482 SADIL--HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           S DI   + RGI   K      A+   +  +++  +   A+   G+AL ++G Y++A E+
Sbjct: 363 SNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAWYNKGVALFNLGMYEEALES 422

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
             + I+++ NF EAW H       L   E+A+    + L I     + ++ RG+ L  L 
Sbjct: 423 WEQTIEIEPNFHEAWTHRGSVLGHLGLYEEAITSYNKALKIKPDLYETWNKRGIALGHLD 482

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           Q+K+AI      L I P   E    R +    IG ++EA+ +Y+ AL+L+
Sbjct: 483 QNKEAISSFDKTLEIKPDFYEAWNNRGAALDNIGRHKEAVSNYNKALELK 532



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 27/205 (13%)

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
           LG   ++  +Y+ A  A+ +A+    N+ +AW +    Y  L   ++A+    + L +  
Sbjct: 236 LGTLFAAEADYQSAIRAYDQALNFKPNYHQAWYNRGIAYNHLEMHQEAVASCDKALELQP 295

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
              +A++ RG+ L  LG++ +A++     L   P   E    R   +  +G+Y EAI  +
Sbjct: 296 SKYEAWNNRGVALVDLGRYTEAVESFDKALKYRPDYPELWNNRGVAFENLGQYAEAISSF 355

Query: 643 DAALDL----------------ELDSMEKFVL-----------QCLAFYQKEIALYTASK 675
           D AL +                +LD  EK +            +  A+Y K +AL+    
Sbjct: 356 DRALAINSNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAWYNKGVALFNLGM 415

Query: 676 INSEFCWFDIDGDIDPLFKEYWCKR 700
                  ++   +I+P F E W  R
Sbjct: 416 YEEALESWEQTIEIEPNFHEAWTHR 440



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 6/122 (4%)

Query: 15  KTHKTICEIDELV-RVDSVMASAITARIELAKLCSLR-NWSKAIRILDSLL--AQSYEIQ 70
           +THK I EI EL+  + S          EL  L +   ++  AIR  D  L    +Y  Q
Sbjct: 208 RTHK-ILEIRELLDEIPSSSNQRSGLFFELGTLFAAEADYQSAIRAYDQALNFKPNYH-Q 265

Query: 71  DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
              NR   Y+ LE+H+  +  CDKAL+L P+  +A+  +G A   LGR  EA+  ++K  
Sbjct: 266 AWYNRGIAYNHLEMHQEAVASCDKALELQPSKYEAWNNRGVALVDLGRYTEAVESFDKAL 325

Query: 131 EH 132
           ++
Sbjct: 326 KY 327



 Score = 47.4 bits (111), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 48  SLRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
           +L  +++AI   D  LA  S +IQ   NR   + +L+ H+  I   +K +++ P   +A+
Sbjct: 344 NLGQYAEAISSFDRALAINSNDIQAHYNRGIAFGKLDQHEKAISSWNKVIEIKPDEHKAW 403

Query: 107 ILKGCAFSALGRKEEALSVWEKGYE 131
             KG A   LG  EEAL  WE+  E
Sbjct: 404 YNKGVALFNLGMYEEALESWEQTIE 428


>gi|428210888|ref|YP_007084032.1| hypothetical protein Oscil6304_0361 [Oscillatoria acuminata PCC
           6304]
 gi|427999269|gb|AFY80112.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
          Length = 362

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 1/284 (0%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF L+ G+ ++    Y  AI+ F + ++ DP   +A   RG AR    +   A+ DFTE 
Sbjct: 41  DF-LTEGVQKLEAEDYEGAIADFTRAIELDPTLVDAYTARGIARHRSEDYVGAVEDFTEV 99

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++  P   + +  R      L E   AI DL++ +E  P+ AD    R     +  +F  
Sbjct: 100 LEIQPENSQVYGLRALDYLYLREYQAAIADLNRVIEENPDDADAYMLRAEAQTELGEFQP 159

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++L  +N + Y   G + +  G+Y  + E   + I LD N   A+      Y
Sbjct: 160 AIRDYNRAIELSPDNPTFYRRRGQSRARSGDYPGSIEDFNRVIDLDANDALAYVFRGNAY 219

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            D+  SE AL   ++ L +D   ++AY+ RG+    L  ++ AI D +  + I+P++   
Sbjct: 220 DDIGESEAALADYEKALELDPTLAQAYYNRGITRRRLEDYQGAIADYTKAIKINPTDANS 279

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           L  R   Y  + E+ +AI DY  A+    +  E +  + L + Q
Sbjct: 280 LLNRGVVYALLEEFPDAIADYTQAIRFNPNLGEAYYNRGLTYQQ 323



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 97/201 (48%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           + R+ +      D  + R  AQ   G++  AI  +++ ++  P  P     RG +RA   
Sbjct: 130 LNRVIEENPDDADAYMLRAEAQTELGEFQPAIRDYNRAIELSPDNPTFYRRRGQSRARSG 189

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +   +I DF   I  + +   A+  RG A   +GES  A+ D  KALE +P  A   + R
Sbjct: 190 DYPGSIEDFNRVIDLDANDALAYVFRGNAYDDIGESEAALADYEKALELDPTLAQAYYNR 249

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           GI   + +D+  A+ D +  +K++  + ++    G+  + + E+  A   + +AI+ + N
Sbjct: 250 GITRRRLEDYQGAIADYTKAIKINPTDANSLLNRGVVYALLEEFPDAIADYTQAIRFNPN 309

Query: 550 FLEAWGHLTQFYQDLANSEKA 570
             EA+ +    YQ + +++ A
Sbjct: 310 LGEAYYNRGLTYQQMGDAQSA 330


>gi|19705092|ref|NP_602587.1| hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19713016|gb|AAL93886.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
          Length = 628

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 134/263 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG++     KY  AI+ +++ ++ +         R  +     + + AI D+ +AI+ N
Sbjct: 32  NRGLSYFLLKKYEEAINDYNRAIELNLNNASYYYNRACSYYCSNKYDKAIEDYDKAIKLN 91

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    +  RG +  AL +  EAI+D  KA++ +PN+A   ++RG   +    ++ A+ED
Sbjct: 92  PNDACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIED 151

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +KLD  N + ++  G        Y K+ E + KAI+LD N    + +    Y+ L 
Sbjct: 152 YNKAIKLDPNNAAYFSSRGDIYYYEKAYNKSIEDYNKAIKLDPNNAFYYDNRGLAYEKLK 211

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    + + ++   +   + RG   + L ++K+AI D    + +DP+N      R
Sbjct: 212 KYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKKYKEAINDYDKAIKLDPNNASYFNNR 271

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
              Y+ +GEY +A++DYD A+ L
Sbjct: 272 GVAYNNLGEYSKALEDYDKAIKL 294



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 127/247 (51%), Gaps = 6/247 (2%)

Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
            RG +    ++ E AI+D+  AI+ N +    +  R  +     +  +AI+D  KA++  
Sbjct: 32  NRGLSYFLLKKYEEAINDYNRAIELNLNNASYYYNRACSYYCSNKYDKAIEDYDKAIKLN 91

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           PN A   + RG   F    ++ A+ED    +KLD  N S Y   G +  ++ +Y KA E 
Sbjct: 92  PNDACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIED 151

Query: 540 HLKAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
           + KAI+LD N   +  + G +  +Y+   N  K++E   + + +D   +  Y  RGL   
Sbjct: 152 YNKAIKLDPNNAAYFSSRGDI-YYYEKAYN--KSIEDYNKAIKLDPNNAFYYDNRGLAYE 208

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            L ++K+AI D +  + ++P+N    Y R   Y+ + +Y+EAI DYD A+ L+ ++   F
Sbjct: 209 KLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKKYKEAINDYDKAIKLDPNNASYF 268

Query: 657 VLQCLAF 663
             + +A+
Sbjct: 269 NNRGVAY 275



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 144/286 (50%), Gaps = 2/286 (0%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           +  +R  +     KY  AI  +D+ +K +P        RG +     +   AI D+ +AI
Sbjct: 63  YYYNRACSYYCSNKYDKAIEDYDKAIKLNPNDACYFNNRGHSYFALNKYSEAIEDYDKAI 122

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + +P+    + +RG +  AL +  +AI+D +KA++ +PN+A     RG + +  K +N +
Sbjct: 123 KLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNKS 182

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +ED +  +KLD  N   Y   GLA   + +YK+A   + KAI+L+ N      +    Y 
Sbjct: 183 IEDYNKAIKLDPNNAFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYN 242

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            L   ++A+    + + +D   +  ++ RG+  + LG++ KA++D    + ++P+     
Sbjct: 243 KLKKYKEAINDYDKAIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKAIKLNPNYTFAY 302

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
             +   +  +GE+ EAI +Y+ A  +ELD   K  ++   F  KE+
Sbjct: 303 NNKGITFDNLGEFEEAIMNYNKA--IELDPSYKSAIENRNFSLKEL 346



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 5/232 (2%)

Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K+I +D     +   RG +     KY  AI  +++ +K DP        RG    +++  
Sbjct: 120 KAIKLDPNNASYYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAY 179

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             +I D+ +AI+ +P+    +  RG A   L +  EAI D +KA++  PN+A   + RG 
Sbjct: 180 NKSIEDYNKAIKLDPNNAFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGF 239

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
              K K +  A+ D    +KLD  N S +   G+A +++GEY KA E + KAI+L+ N+ 
Sbjct: 240 TYNKLKKYKEAINDYDKAIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKAIKLNPNYT 299

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
            A+ +    + +L   E+A+    + + +D  +  A   R   L  L   +K
Sbjct: 300 FAYNNKGITFDNLGEFEEAIMNYNKAIELDPSYKSAIENRNFSLKELENFRK 351



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 96/194 (49%), Gaps = 6/194 (3%)

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           ++ +E EPN+    + RG+  F  K +  A+ D +  ++L+  N S Y     +     +
Sbjct: 17  TEKIEKEPNNDIYYNNRGLSYFLLKKYEEAINDYNRAIELNLNNASYYYNRACSYYCSNK 76

Query: 533 YKKAEEAHLKAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           Y KA E + KAI+L+ N   +    GH    Y  L    +A+E   + + +D   +  Y+
Sbjct: 77  YDKAIEDYDKAIKLNPNDACYFNNRGHS---YFALNKYSEAIEDYDKAIKLDPNNASYYY 133

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            RG   + L ++ KAI+D +  + +DP+N      R   Y+    Y ++I+DY+ A+ L+
Sbjct: 134 KRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNKSIEDYNKAIKLD 193

Query: 650 LDSMEKFVLQCLAF 663
            ++   +  + LA+
Sbjct: 194 PNNAFYYDNRGLAY 207



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 35/155 (22%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASAITAR-----IELAKLCSLRNWSKAIRILDSLL 63
           S Y LNK  K I + ++ +++D   A+  ++R      E A   S+ +++KAI+ LD   
Sbjct: 138 SYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYEKAYNKSIEDYNKAIK-LDPNN 196

Query: 64  AQSYE---------------IQDI--------------CNRAFCYSQLELHKHVIRDCDK 94
           A  Y+               I D                NR F Y++L+ +K  I D DK
Sbjct: 197 AFYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKKYKEAINDYDK 256

Query: 95  ALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           A++LDP     +  +G A++ LG   +AL  ++K 
Sbjct: 257 AIKLDPNNASYFNNRGVAYNNLGEYSKALEDYDKA 291


>gi|300867655|ref|ZP_07112302.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
 gi|300334366|emb|CBN57474.1| hypothetical protein OSCI_3440027 [Oscillatoria sp. PCC 6506]
          Length = 1196

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 145/321 (45%), Gaps = 7/321 (2%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S D    RG+A  N G+   AI+ +D+ +K  P Y +A   RG A     + E A++ + 
Sbjct: 493 SADDWFYRGLALGNLGRNEEAIASYDKAIKIKPDYHQAWYKRGNALGDLGQFEEALASYD 552

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           + I+  P   EAW  RG A   LG   +AI    KA+E + +  +    RG        F
Sbjct: 553 KTIEIKPDHQEAWFNRGWALRKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLGRF 612

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+      +++  ++  A+ Y G AL  +G +++A  ++ K I+   +   AW +   
Sbjct: 613 EEAIASYDKAIEIKHDDHEAWFYRGYALGELGRFEEAIASYDKVIEFKPDDYYAWNNRGW 672

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             Q+L   E+A+    +V+       +A++ RG+ L  LG++++AI      +   P + 
Sbjct: 673 ALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKVIEFKPDDY 732

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSE 679
                R      +G++ EAI  YD  ++ + D  E       A+Y + +AL+   +    
Sbjct: 733 YAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHE-------AWYNRGVALFNLGRNEEA 785

Query: 680 FCWFDIDGDIDPLFKEYWCKR 700
              ++   +I P F E W  R
Sbjct: 786 IASYEKAIEIKPDFYEAWFTR 806



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 143/303 (47%), Gaps = 6/303 (1%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG+A  N G+   AI+ ++++++  P    A   RG A     + E AI+ + + I+  
Sbjct: 703  NRGVALFNLGRNEEAIASYEKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFK 762

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P   EAW  RG A   LG + EAI    KA+E +P+  +    RGIV FK   F  A+  
Sbjct: 763  PDKHEAWYNRGVALFNLGRNEEAIASYEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALAS 822

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                +++  ++  A+   G AL  +  +K+A  +  KAI++  ++  AW +     ++L 
Sbjct: 823  YDKAIEIKPDDHEAWNNRGWALGELRRFKEALTSCDKAIEIKADYHYAWNNRGWALRNLG 882

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              E+A+    + L I     +A++ RG+ L  LG+ ++A+  L   + I P +      R
Sbjct: 883  RFEEAIASYNKALEIKPDHYEAWNNRGVALQNLGRFEEALASLDKAIEIKPDDHYTWCNR 942

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY------QKEIALYTASKINSE 679
             +    +  Y EA+   D A++++ +    +  Q L  +      +   + Y   ++N  
Sbjct: 943  GATLIKLNCYEEALISLDKAIEIDPNYTSAWYNQILVLHKLKRYEESAKSFYKVIELNPN 1002

Query: 680  FCW 682
            + W
Sbjct: 1003 YLW 1005



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 131/273 (47%), Gaps = 14/273 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G++  AI+ +D++++  P   EA   RG A       E AI+ + + I+  
Sbjct: 669 NRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKVIEFK 728

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG A   LG+  EAI    K +EF+P+  +  + RG+  F       A+  
Sbjct: 729 PDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIAS 788

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLT 558
               +++  +   A+   G+ L  +G +++A  ++ KAI++  +  EAW       G L 
Sbjct: 789 YEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALASYDKAIEIKPDDHEAWNNRGWALGELR 848

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           +F + L + +KA+E       I   +  A++ RG  L  LG+ ++AI   +  L I P +
Sbjct: 849 RFKEALTSCDKAIE-------IKADYHYAWNNRGWALRNLGRFEEAIASYNKALEIKPDH 901

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            E    R      +G + EA+   D A++++ D
Sbjct: 902 YEAWNNRGVALQNLGRFEEALASLDKAIEIKPD 934



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 7/314 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A  + G++  A++ +D+ ++  P + EA   RG A       E AI+ + +AI+   
Sbjct: 534 RGNALGDLGQFEEALASYDKTIEIKPDHQEAWFNRGWALRKLGRFEKAITSYDKAIEIKH 593

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EAW  RG A   LG   EAI    KA+E + +  +    RG    +   F  A+   
Sbjct: 594 DDHEAWFYRGYALDDLGRFEEAIASYDKAIEIKHDDHEAWFYRGYALGELGRFEEAIASY 653

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++   ++  A+   G AL ++G++++A  ++ K I+   +  EAW +      +L  
Sbjct: 654 DKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGR 713

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           +E+A+   ++V+        A++ RG  L  LGQ ++AI      +   P   E  Y R 
Sbjct: 714 NEEAIASYEKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRG 773

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
                +G   EAI  Y+ A++++ D  E       A++ + I L+   +       +D  
Sbjct: 774 VALFNLGRNEEAIASYEKAIEIKPDFYE-------AWFTRGIVLFKLGRFEEALASYDKA 826

Query: 687 GDIDPLFKEYWCKR 700
            +I P   E W  R
Sbjct: 827 IEIKPDDHEAWNNR 840



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 140/293 (47%), Gaps = 5/293 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A  + G++  AI+ +D+ ++      EA   RG A       E AI+ + + I+  P
Sbjct: 602 RGYALDDLGRFEEAIASYDKAIEIKHDDHEAWFYRGYALGELGRFEEAIASYDKVIEFKP 661

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  RG A   LG+  EAI    K +EF+P+  +  + RG+  F       A+   
Sbjct: 662 DDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASY 721

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++   ++  A+   G AL ++G++++A  ++ K I+   +  EAW +      +L  
Sbjct: 722 EKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGR 781

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           +E+A+   ++ + I   F +A+  RG++L  LG+ ++A+      + I P + E    R 
Sbjct: 782 NEEAIASYEKAIEIKPDFYEAWFTRGIVLFKLGRFEEALASYDKAIEIKPDDHEAWNNRG 841

Query: 627 SCYHAIGEYREAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIALYTAS 674
                +  ++EA+   D A++++ D     +   + L+ L  +++ IA Y  +
Sbjct: 842 WALGELRRFKEALTSCDKAIEIKADYHYAWNNRGWALRNLGRFEEAIASYNKA 894



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 124/270 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG A    G++  AI+ +D+ ++      EA   RG A       E AI+ + +AI+ 
Sbjct: 566 FNRGWALRKLGRFEKAITSYDKAIEIKHDDHEAWFYRGYALDDLGRFEEAIASYDKAIEI 625

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
                EAW  RG A   LG   EAI    K +EF+P+     + RG        F  A+ 
Sbjct: 626 KHDDHEAWFYRGYALGELGRFEEAIASYDKVIEFKPDDYYAWNNRGWALQNLGQFEEAIA 685

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++   +   A+   G+AL ++G  ++A  ++ K I+   +   AW +     Q+L
Sbjct: 686 SYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKVIEFKPDDYYAWNNRGWALQNL 745

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+A+    +V+       +A++ RG+ L  LG++++AI      + I P   E  + 
Sbjct: 746 GQFEEAIASYDKVIEFKPDKHEAWYNRGVALFNLGRNEEAIASYEKAIEIKPDFYEAWFT 805

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSME 654
           R      +G + EA+  YD A++++ D  E
Sbjct: 806 RGIVLFKLGRFEEALASYDKAIEIKPDDHE 835



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 40/235 (17%)

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ N SA + W  RG A   LG + EAI    KA++ +P+     ++RG        F  
Sbjct: 488 IKINGSADD-WFYRGLALGNLGRNEEAIASYDKAIKIKPDYHQAWYKRGNALGDLGQFEE 546

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+      +++  +++ A+   G AL  +G ++KA  ++ KAI++  +  EAW     FY
Sbjct: 547 ALASYDKTIEIKPDHQEAWFNRGWALRKLGRFEKAITSYDKAIEIKHDDHEAW-----FY 601

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
                                        RG  L  LG+ ++AI      + I   + E 
Sbjct: 602 -----------------------------RGYALDDLGRFEEAIASYDKAIEIKHDDHEA 632

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSM-----EKFVLQCLAFYQKEIALY 671
            + R      +G + EAI  YD  ++ + D         + LQ L  +++ IA Y
Sbjct: 633 WFYRGYALGELGRFEEAIASYDKVIEFKPDDYYAWNNRGWALQNLGQFEEAIASY 687


>gi|431808625|ref|YP_007235523.1| hypothetical protein BPP43_10480 [Brachyspira pilosicoli P43/6/78]
 gi|430781984|gb|AGA67268.1| TPR domain-containing protein [Brachyspira pilosicoli P43/6/78]
          Length = 925

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 153/283 (54%), Gaps = 1/283 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+++    KY  +I+ F+++++ +P    +   RG +    ++ E +I+DF + I+ 
Sbjct: 246 FNRGVSKAKLEKYEESIADFNKVIELNPKNEISYFARGVSNYELKKYEESIADFNKVIEL 305

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+  EA+  RG A+A LG+  E+I D +KA+E  PN+      RG+   K + +  A+E
Sbjct: 306 NPNNKEAYFFRGLAKADLGQYKESIADFNKAIELNPNNERAYLNRGVSKVKLERYEEAIE 365

Query: 505 DLSACVKLDKE-NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           D +  ++L+ + N+ AY   G++ + +  Y++A     KAI+L+ N   A+ +       
Sbjct: 366 DFNKAIELNPDNNEEAYFNRGVSKAKLERYEEAIADFNKAIELNPNNEYAYFNKGFLKLI 425

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   +K+++   + + ++    K Y  RG+  + L ++++AI+D +  + ++P++ +  +
Sbjct: 426 LGLYKKSIKDFNKAIKLNPNDEKLYFNRGISNYELKKYEEAIEDFNKAIKLNPNDEDAYF 485

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            RA     + +Y++A+ D+        D+ +  +++ L  + K
Sbjct: 486 NRAILKINLKKYKQAVNDFKIFAKNNNDAFDITIIKILQEFNK 528



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 142/303 (46%), Gaps = 36/303 (11%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  L+RG+      K    I  F++ ++      E    RG A+A   + + AI DF +A
Sbjct: 37  DLYLNRGVLYSMNNKTNEGIEDFNKSIELKAKNKEVYFFRGLAKADLGQYKEAIEDFNKA 96

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP+   A+  RG ++A L +  EAI+D +KA+E  PN+       G+   + +    
Sbjct: 97  IELNPNNERAYFSRGFSKAQLEKYKEAIEDFNKAIELNPNNERTYFSIGLSKVELEKHEE 156

Query: 502 AVEDLSACVKLDKENKSA-----------------------------------YTYLGLA 526
           A+ED +  ++L+  NK A                                   Y Y GL+
Sbjct: 157 AIEDFNKVIELNPNNKRAYFNRGLSKLKLKKYKESIADFNKSIALNPDNNEEVYFYRGLS 216

Query: 527 LSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
            + + +Y+++     K+I L+  N  EA+ +       L   E+++    +V+ ++ +  
Sbjct: 217 KAKLEKYEESIVDFNKSIALNPDNNEEAYFNRGVSKAKLEKYEESIADFNKVIELNPKNE 276

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            +Y  RG+  + L +++++I D +  + ++P+N E  + R      +G+Y+E+I D++ A
Sbjct: 277 ISYFARGVSNYELKKYEESIADFNKVIELNPNNKEAYFFRGLAKADLGQYKESIADFNKA 336

Query: 646 LDL 648
           ++L
Sbjct: 337 IEL 339



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 128/259 (49%), Gaps = 2/259 (0%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           V+  K   AI + D+ +++D    +  + RG   +   +    I DF ++I+      E 
Sbjct: 13  VSSKKVEEAIKLIDEAIEKDNNDSDLYLNRGVLYSMNNKTNEGIEDFNKSIELKAKNKEV 72

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +  RG A+A LG+  EAI+D +KA+E  PN+      RG    + + +  A+ED +  ++
Sbjct: 73  YFFRGLAKADLGQYKEAIEDFNKAIELNPNNERAYFSRGFSKAQLEKYKEAIEDFNKAIE 132

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           L+  N+  Y  +GL+   + ++++A E   K I+L+ N   A+ +       L   ++++
Sbjct: 133 LNPNNERTYFSIGLSKVELEKHEEAIEDFNKVIELNPNNKRAYFNRGLSKLKLKKYKESI 192

Query: 572 ECLQQVLYIDK-RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCY 629
               + + ++     + Y  RGL    L +++++I D +  + ++P N E  Y  R    
Sbjct: 193 ADFNKSIALNPDNNEEVYFYRGLSKAKLEKYEESIVDFNKSIALNPDNNEEAYFNRGVSK 252

Query: 630 HAIGEYREAIKDYDAALDL 648
             + +Y E+I D++  ++L
Sbjct: 253 AKLEKYEESIADFNKVIEL 271


>gi|340505014|gb|EGR31393.1| peptidase c14 caspase catalytic subunit p20, putative
           [Ichthyophthirius multifiliis]
          Length = 974

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 142/279 (50%), Gaps = 1/279 (0%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           + I++ K IS D+   +G       +  +AI ++   L+ +P + +A+  RG A    +E
Sbjct: 318 SHITEKKQIS-DWYHQQGFEARKNNELETAIQLYTIALQYNPQHFKAVFNRGFAFDKLKE 376

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI D+T+A++   +   A+  RG +    G+   AI+D +KA+   P  +D  H RG
Sbjct: 377 YDLAIKDYTKALEIENNNCYAYYNRGISYDRKGDFDYAIKDFTKAIALNPQKSDFYHNRG 436

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
               K   FN A++D +  ++ + ++  ++    +    +G+++ AE  +L+A+ L  N 
Sbjct: 437 FAWKKKGCFNEAIQDFTFSIQFENDHFKSFYNRAICYEKMGDFQLAENDYLQALSLQPNN 496

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
                +L      L  S +ALE   + L ID +    Y+ +GL+L  +G+ ++A ++ S 
Sbjct: 497 TSCINYLAALLDKLNRSIEALEYFNKSLKIDDKQPLVYNGKGLILDKMGKLEEAQQNFSQ 556

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            + +D  N   ++ R  C  +  +  EAIKD++ AL L+
Sbjct: 557 AIELDRQNPTYVHNRGCCLRSGDKLLEAIKDFENALKLD 595



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 146/694 (21%), Positives = 258/694 (37%), Gaps = 153/694 (22%)

Query: 85  HKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFL 144
           +K  I DCD  L+LD   + AY L+GCAF      ++A+               D  + L
Sbjct: 102 YKEAIIDCDTLLKLDKDNVGAYYLRGCAFEKQNLIDQAIE--------------DFTRVL 147

Query: 145 ELEELLTAAKQDRSVTCEY--DVSNSMSSLTV-----SESGLNANDKMSETSENHNKSDI 197
           +L+E    A   R+       D + ++ +  V     SE  LN  + +    +N   SD 
Sbjct: 148 KLDENHVNAAFARAACLNKIGDYNGAIDNYIVALEKDSEKSLNQTNNIKRAFKN---SDS 204

Query: 198 CDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGS 257
               SQ+  +  + S+  ++      +  E K   ++    +G  +  +++   + +   
Sbjct: 205 SMKISQNNSLLNSQSQKGYELKTPLQQKSENKQQQNIKYYSNGFLL--EIQSSKQKYEEE 262

Query: 258 SDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSAS 317
           S G  +    +D S+    ++++ D  N  + +   +    +Q   TH     L   S  
Sbjct: 263 SGGLMNPQNDKDNSQFCMINTNNID--NSYLFQQQKSNNTQKQAQNTHHQPKNLQHPSHI 320

Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
                       K  ISD                W    +   EA++N +  +    +  
Sbjct: 321 T----------EKKQISD----------------W--YHQQGFEARKNNE--LETAIQLY 350

Query: 378 SISVDFRLSRGIAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +I++ +      A  N G       +Y  AI  + + L+ +     A   RG +   + +
Sbjct: 351 TIALQYNPQHFKAVFNRGFAFDKLKEYDLAIKDYTKALEIENNNCYAYYNRGISYDRKGD 410

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI DFT+AI  NP   + +  RG A    G   EAIQD + +++FE +     + R 
Sbjct: 411 FDYAIKDFTKAIALNPQKSDFYHNRGFAWKKKGCFNEAIQDFTFSIQFENDHFKSFYNRA 470

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL--------------------------- 523
           I   K  DF  A  D    + L   N S   YL                           
Sbjct: 471 ICYEKMGDFQLAENDYLQALSLQPNNTSCINYLAALLDKLNRSIEALEYFNKSLKIDDKQ 530

Query: 524 -------GLALSSIGEYKKAEEAHLKAIQLDRN-----------------FLEA------ 553
                  GL L  +G+ ++A++   +AI+LDR                   LEA      
Sbjct: 531 PLVYNGKGLILDKMGKLEEAQQNFSQAIELDRQNPTYVHNRGCCLRSGDKLLEAIKDFEN 590

Query: 554 -----------WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
                        +L   ++ L   E A++C  + + I     ++ + RG     LG+  
Sbjct: 591 ALKLDPNNTVILSNLGLVFRKLEQFENAIQCYNEEIRIGGENVRSLNNRGYSYAKLGKFN 650

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           +AI+D S  + + P N   L+ R  CY  +G++++AI+D+   +       ++  L   A
Sbjct: 651 EAIQDYSQAVSLQPENTHALHNRGICYEKLGKFQKAIEDFSQVI-------KQNPLNANA 703

Query: 663 FYQKEIALYTASKINSEFCWFDIDGDIDPLFKEY 696
           F+ +              C FD  G ID   ++Y
Sbjct: 704 FFNRG-------------CCFDNLGKIDQAIQDY 724



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 112/250 (44%), Gaps = 34/250 (13%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A+  F++ LK D   P    G+G       +LE A  +F++AI+ +         RG   
Sbjct: 516 ALEYFNKSLKIDDKQPLVYNGKGLILDKMGKLEEAQQNFSQAIELDRQNPTYVHNRGCCL 575

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
            +  + +EAI+D   AL+ +PN+  IL   G+V  K + F  A++  +  +++  EN  +
Sbjct: 576 RSGDKLLEAIKDFENALKLDPNNTVILSNLGLVFRKLEQFENAIQCYNEEIRIGGENVRS 635

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
               G + + +G++ +A + + +A+ L                                 
Sbjct: 636 LNNRGYSYAKLGKFNEAIQDYSQAVSLQ-------------------------------- 663

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
                + A H RG+    LG+ +KAI+D S  +  +P N    + R  C+  +G+  +AI
Sbjct: 664 --PENTHALHNRGICYEKLGKFQKAIEDFSQVIKQNPLNANAFFNRGCCFDNLGKIDQAI 721

Query: 640 KDYDAALDLE 649
           +DY  AL+++
Sbjct: 722 QDYSKALEID 731



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 77/162 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    +  K   AI  F+  LK DP     L   G       + E AI  + E I+  
Sbjct: 570 NRGCCLRSGDKLLEAIKDFENALKLDPNNTVILSNLGLVFRKLEQFENAIQCYNEEIRIG 629

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                +   RG + A LG+  EAIQD S+A+  +P +   LH RGI   K   F  A+ED
Sbjct: 630 GENVRSLNNRGYSYAKLGKFNEAIQDYSQAVSLQPENTHALHNRGICYEKLGKFQKAIED 689

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            S  +K +  N +A+   G    ++G+  +A + + KA+++D
Sbjct: 690 FSQVIKQNPLNANAFFNRGCCFDNLGKIDQAIQDYSKALEID 731



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 60/123 (48%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           ++ +AI  +++ ++       +L  RG + A   +   AI D+++A+   P    A   R
Sbjct: 614 QFENAIQCYNEEIRIGGENVRSLNNRGYSYAKLGKFNEAIQDYSQAVSLQPENTHALHNR 673

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     LG+  +AI+D S+ ++  P +A+    RG         + A++D S  +++D +
Sbjct: 674 GICYEKLGKFQKAIEDFSQVIKQNPLNANAFFNRGCCFDNLGKIDQAIQDYSKALEIDNK 733

Query: 516 NKS 518
            +S
Sbjct: 734 QQS 736



 Score = 40.0 bits (92), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 17/58 (29%), Positives = 30/58 (51%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           NR  CY +L   +  I D  + ++ +P    A+  +GC F  LG+ ++A+  + K  E
Sbjct: 672 NRGICYEKLGKFQKAIEDFSQVIKQNPLNANAFFNRGCCFDNLGKIDQAIQDYSKALE 729


>gi|86608982|ref|YP_477744.1| TPR repeat-containing protein kinase [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86557524|gb|ABD02481.1| tetratricopeptide repeat/protein kinase domain protein
           [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 1270

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 132/274 (48%), Gaps = 12/274 (4%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+ + + G    A + F +++K DP   EA   RG AR    +L+ A+ D+T+A+Q 
Sbjct: 434 FNRGVVRGHLGDAQGAAADFSEVIKRDPQDGEAYFNRGVARVQLSDLQGAVEDYTQALQL 493

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-------PNS-----ADILHERGIV 492
           +P  G+A+  RG AR ALG+   A++D S+AL          P +     AD+  +R + 
Sbjct: 494 DPRHGKAYYHRGLARQALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQADLYLQRAMA 553

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
                    A+ D    ++LD     AY   GLA   +G+   A     +A++LD    +
Sbjct: 554 YLSSNTLEPALADCEQALRLDPNLSRAYLCRGLARQGLGDPGGALADFNRALELDPQMAK 613

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A+ +    + DL N E AL  L Q + +D + + AY  RG +   LG    A++D ++ L
Sbjct: 614 AYLNRGIAHLDLGNIEAALSDLNQAIALDPQDASAYSSRGRIHWLLGDPLAALRDYTAAL 673

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
             DP N +  + R   +    ++  A +D+   L
Sbjct: 674 ERDPQNPQLYFNRGQLHAEREDWPAACEDFSQVL 707



 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 129/283 (45%), Gaps = 24/283 (8%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RGIA+     Y  A++ + Q L  +P +  A   RG A     + + AI D++ AI+ 
Sbjct: 366 FNRGIARYRLEDYEGAVADYTQALGLNPQWAVAYYNRGNAYRQLNQQQQAIEDYSRAIEL 425

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A+  RG  R  LG++  A  D S+ ++ +P   +    RG+   +  D   AVE
Sbjct: 426 NPEDVRAYFNRGVVRGHLGDAQGAAADFSEVIKRDPQDGEAYFNRGVARVQLSDLQGAVE 485

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI-----------------QLD 547
           D +  ++LD  +  AY + GLA  ++G+ + A E   +A+                 Q D
Sbjct: 486 DYTQALQLDPRHGKAYYHRGLARQALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQAD 545

Query: 548 RNFLEAWGHLTQFYQDLANS-EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
                A  +L+      +N+ E AL   +Q L +D   S+AY  RGL   GLG    A+ 
Sbjct: 546 LYLQRAMAYLS------SNTLEPALADCEQALRLDPNLSRAYLCRGLARQGLGDPGGALA 599

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           D +  L +DP   +    R   +  +G    A+ D + A+ L+
Sbjct: 600 DFNRALELDPQMAKAYLNRGIAHLDLGNIEAALSDLNQAIALD 642



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 139/291 (47%), Gaps = 9/291 (3%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L+ R   +A Q + + AI+D T AIQ +P    A+ +RG AR   G+   AI D ++ ++
Sbjct: 298 LLARAQEKARQGDFQGAIADCTLAIQLDPQNSRAYSQRGSARYKSGDLAGAIADYTQVIQ 357

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
                A     RGI  ++ +D+  AV D +  + L+ +   AY   G A   + + ++A 
Sbjct: 358 LA-GDARAYFNRGIARYRLEDYEGAVADYTQALGLNPQWAVAYYNRGNAYRQLNQQQQAI 416

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           E + +AI+L+   + A+ +       L +++ A     +V+  D +  +AY  RG+    
Sbjct: 417 EDYSRAIELNPEDVRAYFNRGVVRGHLGDAQGAAADFSEVIKRDPQDGEAYFNRGVARVQ 476

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL------ELD 651
           L   + A++D +  L +DP + +  Y R     A+G+ + A++D+  AL L      EL 
Sbjct: 477 LSDLQGAVEDYTQALQLDPRHGKAYYHRGLARQALGDPQGAVEDFSQALSLRSAEATELP 536

Query: 652 SMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP-LFKEYWCKRL 701
             E    Q   + Q+ +A  +++ +       +    +DP L + Y C+ L
Sbjct: 537 EAEA-AAQADLYLQRAMAYLSSNTLEPALADCEQALRLDPNLSRAYLCRGL 586



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 160/346 (46%), Gaps = 17/346 (4%)

Query: 317 SLNDSNTNSESYSKS-SISDNKSSDSTES----RSKLSFKWDMLKETSNEAKRNKKFCVT 371
           +L D     E +S++ S+   ++++  E+    ++ L  +  M   +SN  +     C  
Sbjct: 510 ALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQADLYLQRAMAYLSSNTLEPALADCEQ 569

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            +    ++S  + L RG+A+   G    A++ F++ L+ DP   +A + RG A      +
Sbjct: 570 ALRLDPNLSRAY-LCRGLARQGLGDPGGALADFNRALELDPQMAKAYLNRGIAHLDLGNI 628

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           EAA+SD  +AI  +P    A+  RG+    LG+ + A++D + ALE +P +  +   RG 
Sbjct: 629 EAALSDLNQAIALDPQDASAYSSRGRIHWLLGDPLAALRDYTAALERDPQNPQLYFNRGQ 688

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENK---------SAYTYLGLALSSIGEYKKAEEAHLK 542
           ++ + +D+ AA ED S  ++               +A+   G+A   +G+++ A     +
Sbjct: 689 LHAEREDWPAACEDFSQVLQWAARPGIPRGPELLLNAHLRRGMARQRLGDWQGALADFDQ 748

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL--GQ 600
           A+Q D     A+ H  Q    L +   A++   Q L +    ++A   R L    +  G 
Sbjct: 749 ALQGDPQSGLAYFHRGQVRAALGDGLGAIQDYHQALALGVAVAEADIRRDLARAQIQTGD 808

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            + A++ L+  + + P   +    RA     +G + EAI DYD  L
Sbjct: 809 LQAALEQLNEAVRLQPERRDLRQERAELCRQLGRWPEAIADYDEVL 854



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 118/247 (47%), Gaps = 8/247 (3%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I +   + ++  L RG+A+   G +  A++ FDQ L+ DP    A   RG  RA   +  
Sbjct: 715 IPRGPELLLNAHLRRGMARQRLGDWQGALADFDQALQGDPQSGLAYFHRGQVRAALGDGL 774

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAAL--GESVEAIQDLSKALEFEPNSADILHERG 490
            AI D+ +A+    +  EA  RR  ARA +  G+   A++ L++A+  +P   D+  ER 
Sbjct: 775 GAIQDYHQALALGVAVAEADIRRDLARAQIQTGDLQAALEQLNEAVRLQPERRDLRQERA 834

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            +  +   +  A+ D    ++ D ++ +A+   G+A   +G +  A +   + +Q D + 
Sbjct: 835 ELCRQLGRWPEAIADYDEVLRQDPQDWTAWLGRGMAHGQVGNWDSAIQDLSRVLQQDPDH 894

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL------GQHKKA 604
            EA  H  Q  Q L  +E AL+ L ++L  D +   A   RG LL  L      G   +A
Sbjct: 895 REALWHRGQALQQLGQTEAALQDLNRLLQRDPQHRMARLARGSLLLTLAVRGTDGPTNRA 954

Query: 605 IKDLSSG 611
            +D  SG
Sbjct: 955 EQDRVSG 961



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 11/245 (4%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILK-----EDPMYPEALIG----RGTARAFQRELEAAI 435
            +RG        + +A   F Q+L+       P  PE L+     RG AR    + + A+
Sbjct: 684 FNRGQLHAEREDWPAACEDFSQVLQWAARPGIPRGPELLLNAHLRRGMARQRLGDWQGAL 743

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILHERGIVN 493
           +DF +A+Q +P +G A+  RGQ RAALG+ + AIQD  +AL        ADI  +     
Sbjct: 744 ADFDQALQGDPQSGLAYFHRGQVRAALGDGLGAIQDYHQALALGVAVAEADIRRDLARAQ 803

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  D  AA+E L+  V+L  E +            +G + +A   + + ++ D     A
Sbjct: 804 IQTGDLQAALEQLNEAVRLQPERRDLRQERAELCRQLGRWPEAIADYDEVLRQDPQDWTA 863

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           W      +  + N + A++ L +VL  D    +A   RG  L  LGQ + A++DL+  L 
Sbjct: 864 WLGRGMAHGQVGNWDSAIQDLSRVLQQDPDHREALWHRGQALQQLGQTEAALQDLNRLLQ 923

Query: 614 IDPSN 618
            DP +
Sbjct: 924 RDPQH 928



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 130/300 (43%), Gaps = 21/300 (7%)

Query: 387 RGIAQVNEGKYASAISIFDQILK----EDPMYPEA--------LIGRGTARAFQRELEAA 434
           RG+A+   G    A+  F Q L     E    PEA         + R  A      LE A
Sbjct: 504 RGLARQALGDPQGAVEDFSQALSLRSAEATELPEAEAAAQADLYLQRAMAYLSSNTLEPA 563

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           ++D  +A++ +P+   A+  RG AR  LG+   A+ D ++ALE +P  A     RGI + 
Sbjct: 564 LADCEQALRLDPNLSRAYLCRGLARQGLGDPGGALADFNRALELDPQMAKAYLNRGIAHL 623

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              +  AA+ DL+  + LD ++ SAY+  G     +G+   A   +  A++ D    + +
Sbjct: 624 DLGNIEAALSDLNQAIALDPQDASAYSSRGRIHWLLGDPLAALRDYTAALERDPQNPQLY 683

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKR---------FSKAYHLRGLLLHGLGQHKKAI 605
            +  Q + +  +   A E   QVL    R            A+  RG+    LG  + A+
Sbjct: 684 FNRGQLHAEREDWPAACEDFSQVLQWAARPGIPRGPELLLNAHLRRGMARQRLGDWQGAL 743

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            D    L  DP +    + R     A+G+   AI+DY  AL L +   E  + + LA  Q
Sbjct: 744 ADFDQALQGDPQSGLAYFHRGQVRAALGDGLGAIQDYHQALALGVAVAEADIRRDLARAQ 803



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 23/271 (8%)

Query: 395  GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
            G++  AI+ +D++L++DP    A +GRG A       ++AI D +  +Q +P   EA   
Sbjct: 841  GRWPEAIADYDEVLRQDPQDWTAWLGRGMAHGQVGNWDSAIQDLSRVLQQDPDHREALWH 900

Query: 455  RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            RGQA   LG++  A+QDL++ L+ +P        RG +         AV          +
Sbjct: 901  RGQALQQLGQTEAALQDLNRLLQRDPQHRMARLARGSLLLTL-----AVRGTDGPTNRAE 955

Query: 515  ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN--------FLEAWGHLTQFYQDLAN 566
            +++ +    G     +G Y +AE    + IQ +          +LEA     Q  +   N
Sbjct: 956  QDRVS----GTESLELGYYAQAESDFDQVIQEEAQDGEQSRQLYLEAHLKRAQVRRLRHN 1011

Query: 567  SEKALECLQQVLYI------DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
             E A+    +VL +      +   ++A   RGL     G    A+ D ++ +   P   +
Sbjct: 1012 LEGAIADWDRVLELASPGDPEVLVTEALLYRGLCRQERGDLAGALADFTALIQQQPQASQ 1071

Query: 621  CLYLRASCYHAIGEYREAIKDYDAALDLELD 651
               LRA+ + A+G+   A+ D D AL L+ D
Sbjct: 1072 AFALRATVHLALGDQEMALADLDQALSLDRD 1102



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 69/294 (23%), Positives = 128/294 (43%), Gaps = 50/294 (17%)

Query: 375  KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK----EDP--MYPEALIGRGTARAFQ 428
            +S+ + ++  L R   +        AI+ +D++L+     DP  +  EAL+ RG  R  +
Sbjct: 990  QSRQLYLEAHLKRAQVRRLRHNLEGAIADWDRVLELASPGDPEVLVTEALLYRGLCRQER 1049

Query: 429  RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE-----PNSA 483
             +L  A++DFT  IQ  P A +A+  R     ALG+   A+ DL +AL  +      N+A
Sbjct: 1050 GDLAGALADFTALIQQQPQASQAFALRATVHLALGDQEMALADLDQALSLDRDWGVANAA 1109

Query: 484  DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
                +RG ++ +      A+ D +  + L+ +  SA  +  L     G+  KA E + + 
Sbjct: 1110 LAYRQRGDLHRQANCPELAIADYTQALALNPQEHSALLHRALLWDGEGQTDKAIEDYTRL 1169

Query: 544  IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
            +QL+                       L+  ++V  ++ R        G      G    
Sbjct: 1170 LQLE-----------------------LDPQERVWVLNNR--------GWAYAQQGDFSA 1198

Query: 604  AIKDLSSGLGI--------DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            AI+D    + +        DP +++  + RA    A+G+++ A +D+ AAL ++
Sbjct: 1199 AIRDYDQAITLCTADASDRDPCHLKAHFNRALARTALGDWQRACQDFQAALQMQ 1252



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 122/316 (38%), Gaps = 44/316 (13%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            L RG+A    G + SAI    ++L++DP + EAL  RG A     + EAA+ D    +Q 
Sbjct: 865  LGRGMAHGQVGNWDSAIQDLSRVLQQDPDHREALWHRGQALQQLGQTEAALQDLNRLLQR 924

Query: 445  NPSAGEAWKRRG-------------------QARAALGESVE------AIQDLSKALEFE 479
            +P    A   RG                   Q R +  ES+E      A  D  + ++ E
Sbjct: 925  DPQHRMARLARGSLLLTLAVRGTDGPTNRAEQDRVSGTESLELGYYAQAESDFDQVIQEE 984

Query: 480  PNSADILHE--------RGIVNFKFKDFNAAVEDLSACVKL----DKEN--KSAYTYLGL 525
                +   +        R  V     +   A+ D    ++L    D E     A  Y GL
Sbjct: 985  AQDGEQSRQLYLEAHLKRAQVRRLRHNLEGAIADWDRVLELASPGDPEVLVTEALLYRGL 1044

Query: 526  ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF- 584
                 G+   A       IQ      +A+      +  L + E AL  L Q L +D+ + 
Sbjct: 1045 CRQERGDLAGALADFTALIQQQPQASQAFALRATVHLALGDQEMALADLDQALSLDRDWG 1104

Query: 585  ----SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
                + AY  RG L       + AI D +  L ++P     L  RA  +   G+  +AI+
Sbjct: 1105 VANAALAYRQRGDLHRQANCPELAIADYTQALALNPQEHSALLHRALLWDGEGQTDKAIE 1164

Query: 641  DYDAALDLELDSMEKF 656
            DY   L LELD  E+ 
Sbjct: 1165 DYTRLLQLELDPQERV 1180



 Score = 44.3 bits (103), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 17/155 (10%)

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
             RA  Y      +  + DC++AL+LDP L +AY+ +G A   LG    AL         
Sbjct: 548 LQRAMAYLSSNTLEPALADCEQALRLDPNLSRAYLCRGLARQGLGDPGGAL--------- 598

Query: 133 ALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLT-VSES-GLNANDKMSETSE 190
                AD  + LEL+  +  A  +R +    D+ N  ++L+ ++++  L+  D  + +S 
Sbjct: 599 -----ADFNRALELDPQMAKAYLNRGI-AHLDLGNIEAALSDLNQAIALDPQDASAYSSR 652

Query: 191 NHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRS 225
                 + D  +  RD +    +   +P L   R 
Sbjct: 653 GRIHWLLGDPLAALRDYTAALERDPQNPQLYFNRG 687


>gi|254410950|ref|ZP_05024728.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196182305|gb|EDX77291.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 799

 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 134/268 (50%), Gaps = 3/268 (1%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            ++ I  S S   +   +RG  Q + G +  AI+ +D+ L+  P    A   RG A A  
Sbjct: 147 SISSIENSDSEQAEVWFNRGNQQFDAGDFLGAIANYDKALQFKPDNHYAWFMRGVALADL 206

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + E AI+++ +A+Q  P   +AW  RG A A LGE  EAI +  KAL+ +P+     + 
Sbjct: 207 GKYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDFHQAWYN 266

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG+      ++  A+ +    +++  +   A+   G+AL ++G+Y++A   + KA+Q+  
Sbjct: 267 RGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNLGKYEEAIANYDKALQIQP 326

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           +F +AW        DL   E+A+    + L     F  A++ RG+ L  LG++++AI   
Sbjct: 327 DFHQAWFMRGVALADLGEYEEAIANYDKALQFKPDFHYAWNNRGVALADLGKYEEAIASF 386

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYR 636
              L I P ++   +L      A+GE R
Sbjct: 387 DKALQIKP-DLHQAWLNRGI--AVGESR 411



 Score =  104 bits (260), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 8/270 (2%)

Query: 432 EAAISDFTEAIQ-SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           E ++SD   +I+ S+    E W  RG  +   G+ + AI +  KAL+F+P++      RG
Sbjct: 141 ETSLSDSISSIENSDSEQAEVWFNRGNQQFDAGDFLGAIANYDKALQFKPDNHYAWFMRG 200

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +       +  A+ +    +++  +   A+   G+AL+ +GEY++A   + KA+Q+  +F
Sbjct: 201 VALADLGKYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDF 260

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            +AW +      DL   E+A+    + L I     +A++ RG+ L  LG++++AI +   
Sbjct: 261 HQAWYNRGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNLGKYEEAIANYDK 320

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
            L I P   +  ++R      +GEY EAI +YD AL  + D          A+  + +AL
Sbjct: 321 ALQIQPDFHQAWFMRGVALADLGEYEEAIANYDKALQFKPDFH-------YAWNNRGVAL 373

Query: 671 YTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
               K       FD    I P   + W  R
Sbjct: 374 ADLGKYEEAIASFDKALQIKPDLHQAWLNR 403



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 120/238 (50%), Gaps = 14/238 (5%)

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
           ++R  A  +L +S+ +I++       +   A++   RG   F   DF  A+ +    ++ 
Sbjct: 135 RKRVSAETSLSDSISSIEN------SDSEQAEVWFNRGNQQFDAGDFLGAIANYDKALQF 188

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
             +N  A+   G+AL+ +G+Y++A   + KA+Q+  +F +AW +      DL   E+A+ 
Sbjct: 189 KPDNHYAWFMRGVALADLGKYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIA 248

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + L I   F +A++ RG+ L  LG++++AI +    L I P   E  Y R      +
Sbjct: 249 NYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNL 308

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYTAS---KINSEFCW 682
           G+Y EAI +YD AL ++ D  + + ++ +A      Y++ IA Y  +   K +  + W
Sbjct: 309 GKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEAIANYDKALQFKPDFHYAW 366



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 3/168 (1%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    K+  I  DF     +RG+A  + G+Y  AI+ +D+ L+  P   EA   RG A 
Sbjct: 246 AIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVAL 305

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
               + E AI+++ +A+Q  P   +AW  RG A A LGE  EAI +  KAL+F+P+    
Sbjct: 306 GNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEAIANYDKALQFKPDFHYA 365

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
            + RG+       +  A+      +++  +   A+   G+A+     Y
Sbjct: 366 WNNRGVALADLGKYEEAIASFDKALQIKPDLHQAWLNRGIAVGESRHY 413



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 115/261 (44%), Gaps = 49/261 (18%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N GKY  AI+ +D+ L+  P + +A   RG A A   E E AI+++ +A+Q  
Sbjct: 300 NRGVALGNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEAIANYDKALQFK 359

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG A A LG+  EAI    KAL+ +P+       RGI   + + +N    +
Sbjct: 360 PDFHYAWNNRGVALADLGKYEEAIASFDKALQIKPDLHQAWLNRGIAVGESRHYNP---E 416

Query: 506 LSACVKLDKENKSAYT---------YLGLALS---------------SIGEYKKA-EEAH 540
            +  ++    N S            Y G  LS                 G+  +A   AH
Sbjct: 417 AATSLQFQFPNTSPILPNPALTQRGYQGELLSYQEGLKHCLQDTHPEGWGQLHQAIGNAH 476

Query: 541 LKAIQLDRNFLEAWGH-LTQFYQDL------ANSEKALECLQQVLYIDKRFSKAYHLRGL 593
            K  +  RN+ ++W   +T+++Q L      A  E  LE LQ ++ +             
Sbjct: 477 YKEGKYQRNYRDSWDKAVTEYHQALITLTPDAYPELHLEVLQDLIRV------------- 523

Query: 594 LLHGLGQHKKAIKDLSSGLGI 614
            L GL QH +A +  + GL +
Sbjct: 524 -LLGLNQHTEAKEWRNQGLKV 543



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 11/124 (8%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
           L +  + I   D+ +++      A   R + LA L     ++ N+ KA++I      Q  
Sbjct: 240 LGEYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQI------QPD 293

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
           + +   NR      L  ++  I + DKALQ+ P   QA+ ++G A + LG  EEA++ ++
Sbjct: 294 KHEAWYNRGVALGNLGKYEEAIANYDKALQIQPDFHQAWFMRGVALADLGEYEEAIANYD 353

Query: 128 KGYE 131
           K  +
Sbjct: 354 KALQ 357



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 15/135 (11%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
           L K  + I   D+ +++      A   R + LA L     ++ N+ KA++I        Y
Sbjct: 206 LGKYEEAIANYDKALQIQPDFHQAWYNRGVALADLGEYEEAIANYDKALQIQPDFHQAWY 265

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
                 NR    + L  ++  I + DKALQ+ P   +A+  +G A   LG+ EEA++   
Sbjct: 266 ------NRGVALADLGEYEEAIANYDKALQIQPDKHEAWYNRGVALGNLGKYEEAIA--- 316

Query: 128 KGYEHALHQSADLKQ 142
             Y+ AL    D  Q
Sbjct: 317 -NYDKALQIQPDFHQ 330


>gi|434406141|ref|YP_007149026.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
 gi|428260396|gb|AFZ26346.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
          Length = 792

 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 138/315 (43%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA    G+Y  AI+ +D  LK  P  P A   RG A       E AI+ +  A++  
Sbjct: 399 NRGIALGKLGRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLGRNEDAIASYDAALKIQ 458

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   LG + +AI     AL+ +P+ +D  + RG    K      A+  
Sbjct: 459 PDLHQAWYNRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLGRNEDAIAS 518

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             A +K+  +   A+   G AL ++G  + A  ++  A++   +  EAW +      +L 
Sbjct: 519 YDAALKIQPDLHQAWYNRGNALGNLGRDEDAIASYDAALKFQPDLHEAWYNRGNALGNLG 578

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +E A+      L     + +A++ RG+ L  LG+ +  I    + L   P   E  Y R
Sbjct: 579 RNEDAIASYDAALKFQPDYHQAWYNRGIALRKLGRDEDVIASYDAALKFQPDYHEAWYNR 638

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            +    +G Y +AI  YDAAL  + D  +       A+Y + IAL    +       +D 
Sbjct: 639 GNALDELGCYEDAIASYDAALKFQPDLHQ-------AWYNRGIALGNLGRYEDAIASYDA 691

Query: 686 DGDIDPLFKEYWCKR 700
                P + E W  R
Sbjct: 692 ALKFQPDYHEAWNNR 706



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 138/315 (43%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G Y  AI+ +D  LK  P Y +A   RG         E AI+ +  A++  
Sbjct: 297 NRGNALDELGCYEDAIASYDAALKIQPDYHQAWYNRGNDLGNLGRYEDAIACYDAALKIQ 356

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   LG   + I    +AL+ +P+  D  + RGI   K   +  A+  
Sbjct: 357 PDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQPDDPDAWNNRGIALGKLGRYEDAIAC 416

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             A +K+  ++  A+   G+AL  +G  + A  ++  A+++  +  +AW +     + L 
Sbjct: 417 YDAALKIQPDDPGAWNNRGIALGKLGRNEDAIASYDAALKIQPDLHQAWYNRGIALRKLG 476

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +E A+      L I    S A++ RG  L  LG+++ AI    + L I P   +  Y R
Sbjct: 477 RNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLGRNEDAIASYDAALKIQPDLHQAWYNR 536

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            +    +G   +AI  YDAAL  + D  E       A+Y +  AL    +       +D 
Sbjct: 537 GNALGNLGRDEDAIASYDAALKFQPDLHE-------AWYNRGNALGNLGRNEDAIASYDA 589

Query: 686 DGDIDPLFKEYWCKR 700
                P + + W  R
Sbjct: 590 ALKFQPDYHQAWYNR 604



 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 136/315 (43%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G+   AI+ +DQ LK  P Y +A   RG A       E AI+ +  A++  
Sbjct: 263 NRGIALGNLGRNEDAIASYDQALKIQPDYHQAWYNRGNALDELGCYEDAIASYDAALKIQ 322

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG     LG   +AI     AL+ +P+     + RG        +   +  
Sbjct: 323 PDYHQAWYNRGNDLGNLGRYEDAIACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIAS 382

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+  ++  A+   G+AL  +G Y+ A   +  A+++  +   AW +       L 
Sbjct: 383 YDQALKIQPDDPDAWNNRGIALGKLGRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLG 442

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +E A+      L I     +A++ RG+ L  LG+++ AI    + L I P + +  Y R
Sbjct: 443 RNEDAIASYDAALKIQPDLHQAWYNRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNR 502

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            +    +G   +AI  YDAAL ++ D  +       A+Y +  AL    +       +D 
Sbjct: 503 GNDLGKLGRNEDAIASYDAALKIQPDLHQ-------AWYNRGNALGNLGRDEDAIASYDA 555

Query: 686 DGDIDPLFKEYWCKR 700
                P   E W  R
Sbjct: 556 ALKFQPDLHEAWYNR 570



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 128/294 (43%), Gaps = 5/294 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G+Y   I+ +DQ LK  P  P+A   RG A       E AI+ +  A++  
Sbjct: 365 NRGNALGNLGRYEDEIASYDQALKIQPDDPDAWNNRGIALGKLGRYEDAIACYDAALKIQ 424

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG A   LG + +AI     AL+ +P+     + RGI   K      A+  
Sbjct: 425 PDDPGAWNNRGIALGKLGRNEDAIASYDAALKIQPDLHQAWYNRGIALRKLGRNEDAIAS 484

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             A +K+  ++  A+   G  L  +G  + A  ++  A+++  +  +AW +      +L 
Sbjct: 485 YDAALKIQPDDSDAWYNRGNDLGKLGRNEDAIASYDAALKIQPDLHQAWYNRGNALGNLG 544

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E A+      L       +A++ RG  L  LG+++ AI    + L   P   +  Y R
Sbjct: 545 RDEDAIASYDAALKFQPDLHEAWYNRGNALGNLGRNEDAIASYDAALKFQPDYHQAWYNR 604

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTAS 674
                 +G   + I  YDAAL  + D  E +      L  L  Y+  IA Y A+
Sbjct: 605 GIALRKLGRDEDVIASYDAALKFQPDYHEAWYNRGNALDELGCYEDAIASYDAA 658



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 2/255 (0%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+   AI+ +D  LK  P   +A   RG A       E AI+ +  A++  P   EAW  
Sbjct: 510 GRNEDAIASYDAALKIQPDLHQAWYNRGNALGNLGRDEDAIASYDAALKFQPDLHEAWYN 569

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A   LG + +AI     AL+F+P+     + RGI   K       +    A +K   
Sbjct: 570 RGNALGNLGRNEDAIASYDAALKFQPDYHQAWYNRGIALRKLGRDEDVIASYDAALKFQP 629

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+   G AL  +G Y+ A  ++  A++   +  +AW +      +L   E A+   
Sbjct: 630 DYHEAWYNRGNALDELGCYEDAIASYDAALKFQPDLHQAWYNRGIALGNLGRYEDAIASY 689

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI-G 633
              L     + +A++ RG+ L  LG+++ AI      +   P +  C +   +CY+A+ G
Sbjct: 690 DAALKFQPDYHEAWNNRGIALGNLGRYEDAIASFEEAIKFQPDD-HCAWYNKACYYALQG 748

Query: 634 EYREAIKDYDAALDL 648
              +A+++   A++L
Sbjct: 749 NIEQALENLQQAINL 763



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 114/266 (42%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA    G+   AI+ +D  LK  P   +A   RG         E AI+ +  A++  
Sbjct: 467 NRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNRGNDLGKLGRNEDAIASYDAALKIQ 526

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   LG   +AI     AL+F+P+  +  + RG           A+  
Sbjct: 527 PDLHQAWYNRGNALGNLGRDEDAIASYDAALKFQPDLHEAWYNRGNALGNLGRNEDAIAS 586

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             A +K   +   A+   G+AL  +G  +    ++  A++   ++ EAW +      +L 
Sbjct: 587 YDAALKFQPDYHQAWYNRGIALRKLGRDEDVIASYDAALKFQPDYHEAWYNRGNALDELG 646

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E A+      L       +A++ RG+ L  LG+++ AI    + L   P   E    R
Sbjct: 647 CYEDAIASYDAALKFQPDLHQAWYNRGIALGNLGRYEDAIASYDAALKFQPDYHEAWNNR 706

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
                 +G Y +AI  ++ A+  + D
Sbjct: 707 GIALGNLGRYEDAIASFEEAIKFQPD 732



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 7/283 (2%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L  RG   A  +E E AI+ +  A++  P   +AW  RG A   LG + +AI    +AL+
Sbjct: 227 LFERGNLLAAAKEYEEAIASYDAALKIQPDKHQAWNNRGIALGNLGRNEDAIASYDQALK 286

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
            +P+     + RG    +   +  A+    A +K+  +   A+   G  L ++G Y+ A 
Sbjct: 287 IQPDYHQAWYNRGNALDELGCYEDAIASYDAALKIQPDYHQAWYNRGNDLGNLGRYEDAI 346

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
             +  A+++  +  +AW +      +L   E  +    Q L I      A++ RG+ L  
Sbjct: 347 ACYDAALKIQPDKHQAWNNRGNALGNLGRYEDEIASYDQALKIQPDDPDAWNNRGIALGK 406

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           LG+++ AI    + L I P +      R      +G   +AI  YDAAL ++ D  +   
Sbjct: 407 LGRYEDAIACYDAALKIQPDDPGAWNNRGIALGKLGRNEDAIASYDAALKIQPDLHQ--- 463

Query: 658 LQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
               A+Y + IAL    +       +D    I P   + W  R
Sbjct: 464 ----AWYNRGIALRKLGRNEDAIASYDAALKIQPDDSDAWYNR 502



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 2/194 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
           +RG A  N G+   AI+ +D  LK  P Y +A   RG A R   R+ E  I+ +  A++ 
Sbjct: 569 NRGNALGNLGRNEDAIASYDAALKFQPDYHQAWYNRGIALRKLGRD-EDVIASYDAALKF 627

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   EAW  RG A   LG   +AI     AL+F+P+     + RGI       +  A+ 
Sbjct: 628 QPDYHEAWYNRGNALDELGCYEDAIASYDAALKFQPDLHQAWYNRGIALGNLGRYEDAIA 687

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
              A +K   +   A+   G+AL ++G Y+ A  +  +AI+   +   AW +   +Y   
Sbjct: 688 SYDAALKFQPDYHEAWNNRGIALGNLGRYEDAIASFEEAIKFQPDDHCAWYNKACYYALQ 747

Query: 565 ANSEKALECLQQVL 578
            N E+ALE LQQ +
Sbjct: 748 GNIEQALENLQQAI 761


>gi|223937044|ref|ZP_03628952.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223894325|gb|EEF60778.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 466

 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 142/306 (46%), Gaps = 35/306 (11%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+A   +G + S I  FD+ ++ +P    A   RG     + E+E AISD+TEAI+ 
Sbjct: 65  FNRGMAYTQKGDFTSGIHDFDETIRLNPE-GRAYDNRGNLYDQKGEVEKAISDYTEAIKL 123

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A+ +R       G+S +AI D ++A++  P  A+    RG      +D++ A+ 
Sbjct: 124 NPKDAWAYAKRAADYHKKGDSEKAISDYTQAIQINPKDANYYDSRGRAYAMKRDWDKAIA 183

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------- 556
           D    VKL+ +  SAY   GLA +  G+  KA     + I+L+     A+G         
Sbjct: 184 DYDQVVKLNPKQVSAYNSRGLAYAMKGDMDKAIRDLSEVIKLNPKDAPAYGSRGLSYAMK 243

Query: 557 ------LTQF--------------------YQDLANSEKALECLQQVLYIDKRFSKAYHL 590
                 ++ F                    YQ+    ++AL    + + ++ + + A+H 
Sbjct: 244 GDWDKAVSDFSELIKLKPTDSIGYDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFHN 303

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RGL+  G G  +KAI++ S  + ++P + +    R   Y+  GEY++ I D + AL L  
Sbjct: 304 RGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAKRGYAYYQKGEYQKGIDDINEALRLNP 363

Query: 651 DSMEKF 656
              E +
Sbjct: 364 KDAESY 369



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 89/175 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+A   +G    AI    +++K +P    A   RG + A + + + A+SDF+E I+  
Sbjct: 201 SRGLAYAMKGDMDKAIRDLSEVIKLNPKDAPAYGSRGLSYAMKGDWDKAVSDFSELIKLK 260

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    +  R  A    G+  EA+ D S+A++     A   H RG++     D+  A+E+
Sbjct: 261 PTDSIGYDSRATAYQNQGKLDEALADFSEAIKLNDKDAGAFHNRGLIYVGKGDWEKAIEN 320

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            S  ++L+ ++  A+   G A    GEY+K  +   +A++L+    E++ +L  F
Sbjct: 321 FSKSIQLNPQDADAFAKRGYAYYQKGEYQKGIDDINEALRLNPKDAESYNNLAWF 375



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+  V +G +  AI  F + ++ +P   +A   RG A   + E +  I D  EA++ N
Sbjct: 303 NRGLIYVGKGDWEKAIENFSKSIQLNPQDADAFAKRGYAYYQKGEYQKGIDDINEALRLN 362

Query: 446 PSAGE-----AWKRRGQARAALGESVEAIQDLSKALEF 478
           P   E     AW R     A++ +  EA++   KA E 
Sbjct: 363 PKDAESYNNLAWFRATCPDASMRKGKEAVEAGKKACEL 400


>gi|434385884|ref|YP_007096495.1| DNA/RNA helicase, superfamily I [Chamaesiphon minutus PCC 6605]
 gi|428016874|gb|AFY92968.1| DNA/RNA helicase, superfamily I [Chamaesiphon minutus PCC 6605]
          Length = 1119

 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 132/265 (49%), Gaps = 2/265 (0%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
              RG  +   G+ A AI  + + +  DP Y    +GRG A+    +   AI D++ AI  
Sbjct: 831  FDRGTEKYRLGQNAEAIDDYSRAITIDPQYVGVYVGRGAAKYNLGQHREAIDDYSRAITL 890

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            NP A EA+  RG A+  LG+  EAI+D S A+   P  A   + RG        + AA++
Sbjct: 891  NPQAAEAYFGRGTAKYNLGQHREAIEDYSHAITLNPQDAFAYYNRGFAKHSLGQYQAAID 950

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-GHLTQFYQD 563
            D +  + ++ ++  AY   G A  S+G+++ A + +   I ++    EA+ G  T  Y +
Sbjct: 951  DYNCVIMINPQDIDAYFRRGAARHSLGQHQAAIDDYNFVIMINPQAAEAYVGRGTAKY-N 1009

Query: 564  LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            L   + A++     + ++ + + AY+ RGL    LG+ ++AI D +  + ++P      Y
Sbjct: 1010 LGQHQAAIDDCNFAITLNPQATDAYNNRGLAKCSLGRDREAIDDYNFAITLNPQYAVAYY 1069

Query: 624  LRASCYHAIGEYREAIKDYDAALDL 648
             R    + +G+ + AI D+  A +L
Sbjct: 1070 NRGLSKYNLGQSQAAIPDFIKATEL 1094



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 146/301 (48%), Gaps = 13/301 (4%)

Query: 352  WDMLKET----SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
            WD   E      +E  RN+  C+ R S +  ++++ R  + I  +N+  Y S     +++
Sbjct: 769  WDKAVEIWGKLGDEDGRNR--CLLRSSINNCVAIEDRSGQNIEAIND--YDS-----ERV 819

Query: 408  LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
            ++ DP   +A   RGT +    +   AI D++ AI  +P     +  RG A+  LG+  E
Sbjct: 820  IEIDPQDAKAYFDRGTEKYRLGQNAEAIDDYSRAITIDPQYVGVYVGRGAAKYNLGQHRE 879

Query: 468  AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
            AI D S+A+   P +A+    RG   +       A+ED S  + L+ ++  AY   G A 
Sbjct: 880  AIDDYSRAITLNPQAAEAYFGRGTAKYNLGQHREAIEDYSHAITLNPQDAFAYYNRGFAK 939

Query: 528  SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             S+G+Y+ A + +   I ++   ++A+         L   + A++    V+ I+ + ++A
Sbjct: 940  HSLGQYQAAIDDYNCVIMINPQDIDAYFRRGAARHSLGQHQAAIDDYNFVIMINPQAAEA 999

Query: 588  YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            Y  RG   + LGQH+ AI D +  + ++P   +    R     ++G  REAI DY+ A+ 
Sbjct: 1000 YVGRGTAKYNLGQHQAAIDDCNFAITLNPQATDAYNNRGLAKCSLGRDREAIDDYNFAIT 1059

Query: 648  L 648
            L
Sbjct: 1060 L 1060



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 5/238 (2%)

Query: 376  SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            S++I++D       + RG A+ N G++  AI  + + +  +P   EA  GRGTA+    +
Sbjct: 851  SRAITIDPQYVGVYVGRGAAKYNLGQHREAIDDYSRAITLNPQAAEAYFGRGTAKYNLGQ 910

Query: 431  LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
               AI D++ AI  NP    A+  RG A+ +LG+   AI D +  +   P   D    RG
Sbjct: 911  HREAIEDYSHAITLNPQDAFAYYNRGFAKHSLGQYQAAIDDYNCVIMINPQDIDAYFRRG 970

Query: 491  IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
                      AA++D +  + ++ +   AY   G A  ++G+++ A +    AI L+   
Sbjct: 971  AARHSLGQHQAAIDDYNFVIMINPQAAEAYVGRGTAKYNLGQHQAAIDDCNFAITLNPQA 1030

Query: 551  LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             +A+ +       L    +A++     + ++ +++ AY+ RGL  + LGQ + AI D 
Sbjct: 1031 TDAYNNRGLAKCSLGRDREAIDDYNFAITLNPQYAVAYYNRGLSKYNLGQSQAAIPDF 1088



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)

Query: 369  CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            CV  I+      +D    RG A+ + G++ +AI  ++ ++  +P   EA +GRGTA+   
Sbjct: 954  CVIMINPQ---DIDAYFRRGAARHSLGQHQAAIDDYNFVIMINPQAAEAYVGRGTAKYNL 1010

Query: 429  RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
             + +AAI D   AI  NP A +A+  RG A+ +LG   EAI D + A+   P  A   + 
Sbjct: 1011 GQHQAAIDDCNFAITLNPQATDAYNNRGLAKCSLGRDREAIDDYNFAITLNPQYAVAYYN 1070

Query: 489  RGIVNFKFKDFNAAVEDLSACVKL-DKENK 517
            RG+  +      AA+ D     +L D+EN+
Sbjct: 1071 RGLSKYNLGQSQAAIPDFIKATELFDRENQ 1100


>gi|307154454|ref|YP_003889838.1| hypothetical protein Cyan7822_4657 [Cyanothece sp. PCC 7822]
 gi|306984682|gb|ADN16563.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 434

 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 132/267 (49%), Gaps = 2/267 (0%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF++  G +++    Y  AI  F +++  +P   EA   RG AR+  ++   AI D+ +A
Sbjct: 47  DFQI--GQSKLKAKDYQGAIVEFSKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKA 104

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I  NP     +  RG A    G+S  A++D +KA+   P  A+    RG +  + +D+  
Sbjct: 105 ISLNPKEARYYNNRGLALHRSGDSKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRR 164

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++LD +N +AY   G+ LS++G +++  E   +AI+LD +   A+ +     
Sbjct: 165 ALADHNQALRLDPKNATAYNNRGVTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVR 224

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             L +    +E L +   +D    K Y  R  +    G++++AI + S  +   P     
Sbjct: 225 YLLGSYSGVIEDLNRSTSLDPSEIKPYGNRATVFDESGRYQEAIDNYSQVIRRQPKEAHA 284

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
            Y R   Y  IG +++AI DY  A +L
Sbjct: 285 YYGRGINYAEIGSFQQAIDDYIQATNL 311



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 133/304 (43%), Gaps = 32/304 (10%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           SK I+++ ++S     RG+A+     Y  AI  +++ +  +P        RG A     +
Sbjct: 68  SKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISLNPKEARYYNNRGLALHRSGD 127

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            ++A+ D+ +AI  NP   EA+  RG  R  L +   A+ D ++AL  +P +A   + RG
Sbjct: 128 SKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALADHNQALRLDPKNATAYNNRG 187

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +      +F   +ED    ++LD     AY   G+    +G Y    E   ++  LD + 
Sbjct: 188 VTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVRYLLGSYSGVIEDLNRSTSLDPSE 247

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
           ++ +G+    + +    ++A++   QV+    + + AY+ RG+    +G  ++AI D   
Sbjct: 248 IKPYGNRATVFDESGRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQ 307

Query: 611 GLGIDP----SNIECLYLR-----------------------ASCYHAIGEYREAIKDYD 643
              ++P    +N + L  R                       +  YH  G  R  +KDY 
Sbjct: 308 ATNLNPRLLITNFDVLLGRNPLKNAEAILQPFNQAIQENPVSSVAYHNRGNIRYQLKDYR 367

Query: 644 AALD 647
            A++
Sbjct: 368 GAIE 371



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 5/222 (2%)

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           GQ++    +   AI + SK +   P  ++  + RG+     KD+  A+ED +  + L+ +
Sbjct: 51  GQSKLKAKDYQGAIVEFSKVIAINPQISEAFNNRGLARSGLKDYRGAIEDYNKAISLNPK 110

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
               Y   GLAL   G+ K A E + KAI L+    EA+ +      +L +  +AL    
Sbjct: 111 EARYYNNRGLALHRSGDSKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALADHN 170

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           Q L +D + + AY+ RG+ L  LG  ++ ++D    + +DPS       R    + +G Y
Sbjct: 171 QALRLDPKNATAYNNRGVTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVRYLLGSY 230

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT 672
              I+D + +  L+   ++ +  +   F     YQ+ I  Y+
Sbjct: 231 SGVIEDLNRSTSLDPSEIKPYGNRATVFDESGRYQEAIDNYS 272



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 128/297 (43%), Gaps = 34/297 (11%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A    G   SA+  +++ +  +P   EA   RG  R   R+   A++D  +A++ +
Sbjct: 117 NRGLALHRSGDSKSALEDYNKAISLNPKLAEAYTNRGFIRDELRDYRRALADHNQALRLD 176

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG   + LG   E ++D  +A+  +P+ A   + RGIV +    ++  +ED
Sbjct: 177 PKNATAYNNRGVTLSNLGNFQEGLEDFERAIRLDPSIAIAYNNRGIVRYLLGSYSGVIED 236

Query: 506 LSACVKLD--------------------------------KENKSAYTYLGLAL--SSIG 531
           L+    LD                                ++ K A+ Y G  +  + IG
Sbjct: 237 LNRSTSLDPSEIKPYGNRATVFDESGRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIG 296

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
            +++A + +++A  L+   L     +      L N+E  L+   Q +  +   S AYH R
Sbjct: 297 SFQQAIDDYIQATNLNPRLLITNFDVLLGRNPLKNAEAILQPFNQAIQENPVSSVAYHNR 356

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           G + + L  ++ AI+D +  +  D +       R    + +G+ + A  D   A+ L
Sbjct: 357 GNIRYQLKDYRGAIEDYTLAIRFDNNYALAYNNRGVARYQVGDKQGAKADLQQAVIL 413



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 11/183 (6%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  AI  + Q+++  P    A  GRG   A     + AI D+ +A   NP        
Sbjct: 262 GRYQEAIDNYSQVIRRQPKEAHAYYGRGINYAEIGSFQQAIDDYIQATNLNPRLLITNFD 321

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
               R  L  +   +Q  ++A++  P S+   H RG + ++ KD+  A+ED +  ++ D 
Sbjct: 322 VLLGRNPLKNAEAILQPFNQAIQENPVSSVAYHNRGNIRYQLKDYRGAIEDYTLAIRFDN 381

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
               AY   G+A   +G+ K+  +A L+   +          L Q  +D A  ++AL  L
Sbjct: 382 NYALAYNNRGVARYQVGD-KQGAKADLQQAVI----------LFQQQKDAAKVQQALAVL 430

Query: 575 QQV 577
             +
Sbjct: 431 NTI 433



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 47  CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
            +L +++KAI  L+  LA++Y      NR F   +L  ++  + D ++AL+LDP    AY
Sbjct: 130 SALEDYNKAIS-LNPKLAEAY-----TNRGFIRDELRDYRRALADHNQALRLDPKNATAY 183

Query: 107 ILKGCAFSALGRKEEALSVWEK 128
             +G   S LG  +E L  +E+
Sbjct: 184 NNRGVTLSNLGNFQEGLEDFER 205


>gi|159906168|ref|YP_001549830.1| hypothetical protein MmarC6_1787 [Methanococcus maripaludis C6]
 gi|159887661|gb|ABX02598.1| TPR repeat-containing protein [Methanococcus maripaludis C6]
          Length = 543

 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 131/252 (51%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R  +  S  +D   ++G+A  + G+Y  AI  +D+ L+ D  Y ++   +G A  + 
Sbjct: 259 CYNRAIELDSNDIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYL 318

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              + AI  + + ++ NP   ++W  +G +   +G   EAI+   K+LE  P   DIL+ 
Sbjct: 319 ERYDEAIVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELNPEDVDILYN 378

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G   +    +  AV+  +  + ++     A+   GLAL  +G+Y++A   + +AI+L  
Sbjct: 379 KGNSLYDLGRYEEAVQFYNNALNINSSCSDAWHNKGLALHDLGKYEEAIGCYNRAIELGP 438

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N  ++W +      DL   E+A+EC  + L ++  +S  ++ +GL L  LG++++AI+  
Sbjct: 439 NNSDSWNNKGNSLYDLGRYEEAIECYDKSLELNPNYSDTWYNKGLSLCKLGRYEEAIEYY 498

Query: 609 SSGLGIDPSNIE 620
              L ++PS+ E
Sbjct: 499 GRALELNPSDEE 510



 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 149/320 (46%), Gaps = 14/320 (4%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  ++ +    + D  L +G    +   Y   I   D+ L+ DP   +A    G +  F 
Sbjct: 89  CFDKVLELDPEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPENLDAYYCEGDSYYFL 148

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              E ++  +  A++ NP+       +G +   LG   EAI    KAL+ +PN A  L  
Sbjct: 149 ERYEESLECYNRALELNPTYTSLLVDKGTSLHKLGRYEEAIICYDKALKIDPNYAYALSN 208

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL----GLALSSIGEYKKAEEAHLKAI 544
           +G+  +    +  ++E    C     ++ S Y+Y+    GLAL  +G Y++A   + +AI
Sbjct: 209 KGLSLYDLGRYEESIE----CYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAI 264

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           +LD N +++W +      DL   E+A+ C  + L +D  +S + + +GL L  L ++ +A
Sbjct: 265 ELDSNDIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYLERYDEA 324

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQ 659
           I      L ++P + +    +    H +G Y EAI+ YD +L+L  + ++        L 
Sbjct: 325 IVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELNPEDVDILYNKGNSLY 384

Query: 660 CLAFYQKEIALY-TASKINS 678
            L  Y++ +  Y  A  INS
Sbjct: 385 DLGRYEEAVQFYNNALNINS 404



 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 145/281 (51%), Gaps = 5/281 (1%)

Query: 373 ISKSKSISVD----FRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           I   K++ +D    + LS +G++  + G+Y  +I  +D+ LK +  Y      +G A   
Sbjct: 190 ICYDKALKIDPNYAYALSNKGLSLYDLGRYEESIECYDKALKSNSGYSYVWYNKGLALYD 249

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
               E AI  +  AI+ + +  ++W  +G A   LG   EAI    +ALE + N +D  +
Sbjct: 250 MGRYEEAIGCYNRAIELDSNDIDSWNNKGLALYDLGRYEEAIVCYDRALELDSNYSDSQY 309

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G+     + ++ A+      ++L+ E+  ++   G++L  +G Y++A E + K+++L+
Sbjct: 310 NKGLALQYLERYDEAIVCYDKTLELNPEDTDSWCNKGISLHEVGRYEEAIECYDKSLELN 369

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
              ++   +      DL   E+A++     L I+   S A+H +GL LH LG++++AI  
Sbjct: 370 PEDVDILYNKGNSLYDLGRYEEAVQFYNNALNINSSCSDAWHNKGLALHDLGKYEEAIGC 429

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            +  + + P+N +    + +  + +G Y EAI+ YD +L+L
Sbjct: 430 YNRAIELGPNNSDSWNNKGNSLYDLGRYEEAIECYDKSLEL 470



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 132/280 (47%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R  +         + +G +    G+Y  AI  +D+ LK DP Y  AL  +G +    
Sbjct: 157 CYNRALELNPTYTSLLVDKGTSLHKLGRYEEAIICYDKALKIDPNYAYALSNKGLSLYDL 216

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              E +I  + +A++SN      W  +G A   +G   EAI   ++A+E + N  D  + 
Sbjct: 217 GRYEESIECYDKALKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAIELDSNDIDSWNN 276

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G+  +    +  A+      ++LD     +    GLAL  +  Y +A   + K ++L+ 
Sbjct: 277 KGLALYDLGRYEEAIVCYDRALELDSNYSDSQYNKGLALQYLERYDEAIVCYDKTLELNP 336

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              ++W +      ++   E+A+EC  + L ++       + +G  L+ LG++++A++  
Sbjct: 337 EDTDSWCNKGISLHEVGRYEEAIECYDKSLELNPEDVDILYNKGNSLYDLGRYEEAVQFY 396

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           ++ L I+ S  +  + +    H +G+Y EAI  Y+ A++L
Sbjct: 397 NNALNINSSCSDAWHNKGLALHDLGKYEEAIGCYNRAIEL 436



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 134/303 (44%), Gaps = 41/303 (13%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E +I  F  A++ +P    AW  +G     +  S EA+    K LE +P + D    +G 
Sbjct: 50  EKSIECFNNALELDPYDKTAWFNKGYILYGIYRSNEALVCFDKVLELDPEAFDAWLYKGY 109

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAY----------------------------TYL 523
             +   ++   +E L   ++LD EN  AY                            TY 
Sbjct: 110 TYYDLDNYQKTIECLDKALELDPENLDAYYCEGDSYYFLERYEESLECYNRALELNPTYT 169

Query: 524 ------GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
                 G +L  +G Y++A   + KA+++D N+  A  +      DL   E+++EC  + 
Sbjct: 170 SLLVDKGTSLHKLGRYEEAIICYDKALKIDPNYAYALSNKGLSLYDLGRYEESIECYDKA 229

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
           L  +  +S  ++ +GL L+ +G++++AI   +  + +D ++I+    +    + +G Y E
Sbjct: 230 LKSNSGYSYVWYNKGLALYDMGRYEEAIGCYNRAIELDSNDIDSWNNKGLALYDLGRYEE 289

Query: 638 AIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYW 697
           AI  YD AL+L+ +  +       + Y K +AL    + +     +D   +++P   + W
Sbjct: 290 AIVCYDRALELDSNYSD-------SQYNKGLALQYLERYDEAIVCYDKTLELNPEDTDSW 342

Query: 698 CKR 700
           C +
Sbjct: 343 CNK 345



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 101/205 (49%), Gaps = 8/205 (3%)

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           + G+  +  +++  ++E  +  ++LD  +K+A+   G  L  I    +A     K ++LD
Sbjct: 38  DEGLNYYDNENYEKSIECFNNALELDPYDKTAWFNKGYILYGIYRSNEALVCFDKVLELD 97

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
               +AW +    Y DL N +K +ECL + L +D     AY+  G   + L +++++++ 
Sbjct: 98  PEAFDAWLYKGYTYYDLDNYQKTIECLDKALELDPENLDAYYCEGDSYYFLERYEESLEC 157

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD-----SMEKFVLQCLA 662
            +  L ++P+    L  + +  H +G Y EAI  YD AL ++ +     S +   L  L 
Sbjct: 158 YNRALELNPTYTSLLVDKGTSLHKLGRYEEAIICYDKALKIDPNYAYALSNKGLSLYDLG 217

Query: 663 FYQKEIALY-TASKINS--EFCWFD 684
            Y++ I  Y  A K NS   + W++
Sbjct: 218 RYEESIECYDKALKSNSGYSYVWYN 242



 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%)

Query: 75  RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           + + Y  L+ ++  I   DKAL+LDP  L AY  +G ++  L R EE+L  + +  E
Sbjct: 107 KGYTYYDLDNYQKTIECLDKALELDPENLDAYYCEGDSYYFLERYEESLECYNRALE 163


>gi|432331042|ref|YP_007249185.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
 gi|432137751|gb|AGB02678.1| tetratricopeptide repeat protein [Methanoregula formicicum SMSP]
          Length = 4078

 Score =  113 bits (282), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 10/313 (3%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
              RG + V+ G +  AI+ FDQ+L   P    A   +G A         A + F  AI  
Sbjct: 3750 FERGRSLVHTGMFREAIASFDQVLILAPGNANAHFEKGRALIALGNHAGATAAFDRAIDI 3809

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            NPS  +A   +G+A    G    AI  L +ALE  P  A +  ++G+     + +  AV+
Sbjct: 3810 NPSCWQALAGKGRAETYQGNYDGAITALDRALEIMPKKAILHDQKGLAYAALEQYRDAVQ 3869

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                 ++++   +  + + G+AL+ +G Y+ A EA  KAI+ D N  EAW        DL
Sbjct: 3870 SYDRALEIEPLPR-VFAHKGIALAELGMYRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDL 3928

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
                 A +  ++ L +D   ++A+  +G++L    + ++A++     L IDP+     + 
Sbjct: 3929 GKYADAEKAYERGLALDPENAEAWTRQGMVLSAQQKFEEALEHYDRALMIDPTFSIAYFT 3988

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIALYT-ASKINS 678
            R S   A+  Y+EA++ +DA L ++ D ++ ++     LQ L  YQ  +A++  A +I+ 
Sbjct: 3989 RGSALIAMKRYQEAVEAFDAMLHIQPDFVDAYIHKGRALQELELYQDALAVFKRALEIDP 4048

Query: 679  --EFCWFDIDGDI 689
              + CW DI GDI
Sbjct: 4049 TRKECWNDI-GDI 4060



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 145/304 (47%), Gaps = 7/304 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A V   ++  A+  F + L+  P    AL  RG A    ++   A+ DF   ++  P 
Sbjct: 285 GLAGVETRQFDDAVEAFTRNLEIHPGNAGALFHRGLAHYRLKQYREAVQDFDSTLEPEPG 344

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EAW RRG A   L    EA++  ++ L    N A  L+ RGI   +      A+E   
Sbjct: 345 NKEAWYRRGIACVNLSRYEEALESFNRRLGLGQNHAGSLYFRGIAQARLGRNKEAIESFD 404

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
           A +++D    SA    G+A +S+G + +A  ++ +A++++    +A  H       L  +
Sbjct: 405 AALQVDPSCASAAFQQGVAYASLGRFSEAVASYDRALRINPGLSDAIYHKGFALSKLGRT 464

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E A++  ++ +  D + +KA+H +GL L  +G+  +AI+     L + P   +  + + +
Sbjct: 465 EDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDESLALKPGFAQAAFDKGA 524

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG 687
               +G++ +A++ +D A    + +  K+V    A+YQK + L    + +     F+   
Sbjct: 525 ALIRLGKFEDALQAFDQA----IVTNSKYV---NAYYQKGLTLVQLERFSDAITAFEQAA 577

Query: 688 DIDP 691
            IDP
Sbjct: 578 VIDP 581



 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 131/285 (45%), Gaps = 7/285 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA VN  +Y  A+  F++ L     +  +L  RG A+A     + AI  F  A+Q +P
Sbjct: 352 RGIACVNLSRYEEALESFNRRLGLGQNHAGSLYFRGIAQARLGRNKEAIESFDAALQVDP 411

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S   A  ++G A A+LG   EA+    +AL   P  +D ++ +G    K      AV++ 
Sbjct: 412 SCASAAFQQGVAYASLGRFSEAVASYDRALRINPGLSDAIYHKGFALSKLGRTEDAVQEF 471

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              V  D +N  A+   GL L  IG + +A EA  +++ L   F +A          L  
Sbjct: 472 ERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDESLALKPGFAQAAFDKGAALIRLGK 531

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E AL+   Q +  + ++  AY+ +GL L  L +   AI        IDP++   LY R 
Sbjct: 532 FEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLERFSDAITAFEQAAVIDPTHTLSLYHRG 591

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
                +  + EA+  +DA L +  ++         A Y+K IAL+
Sbjct: 592 LTLGKLKRFMEAVVAFDAVLAISPENTN-------ARYEKGIALF 629



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 7/305 (2%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            + I+  + G+   A+  FD++L   P   EA +GRG A    +  + AI  F   I   P
Sbjct: 3038 KAISLAHLGRAEEAVPAFDKVLGLRPDDAEAFLGRGRAYYTLKSFDRAIESFDRVIGYLP 3097

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                AW  +G A   LG   EAI    K LE +  + D L+   +          AVE  
Sbjct: 3098 QHAAAWHEKGMALYDLGRYEEAIAAFDKTLEEDGGNHDALYYCALAYAAIGKDAEAVESF 3157

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               +    +N +A+   GLALS +  +K A  A  +AI++  ++ +A     + +  L +
Sbjct: 3158 ELLLTRAPDNATAWYENGLALSRLKRHKDAIHAFDQAIRVRPDYFDAHEVRARSFDSLGD 3217

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             ++ ++   + L +      + H +G+ L  L ++++AIK     L IDP+  + +Y + 
Sbjct: 3218 PKETIDAYNRALALQPMHVPSLHRKGVALIRLERYEEAIKVFDRALEIDPACADAIYDKG 3277

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
                A+G YREA+K YD  L ++  + E         Y K IAL    + +     F+  
Sbjct: 3278 RALSALGMYREAVKTYDKLLGIDAGNAE-------VSYDKGIALAHLGRHDDAIVAFNKA 3330

Query: 687  GDIDP 691
             D+DP
Sbjct: 3331 LDLDP 3335



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 169/376 (44%), Gaps = 15/376 (3%)

Query: 318  LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
            LN     +E++ K+S  D  S  +   R +       L E   + +    F  TR  +  
Sbjct: 2331 LNYHAAATEAFEKTSALDATSVPAAFGRGQ------SLAELDRDEEAIAAF--TRTLELD 2382

Query: 378  SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
            S   +    RG A +    Y  AIS FD  ++  P + ++   RG A   Q + E AI  
Sbjct: 2383 STQAEAAYLRGCAYLRLALYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQGKYEKAIRS 2442

Query: 438  FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
            + +A+  + S  +A  + G   AAL ++ +A++   + LE  P  ADIL  +    F+  
Sbjct: 2443 YKQALTHDGSITDAVYQTGLCYAALNKNDQALKTFDRVLETLPERADILFHKSRALFRLM 2502

Query: 498  DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
             +  A+  + A + ++  + + +   G  L  +G ++++ EA+ +++ L+ + +  W   
Sbjct: 2503 RYEEALTAIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSLALNPDSITCWYLK 2562

Query: 558  TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             +   DLA  E+A+ C  +V+  D+  + A+  +G  L  LG+   AI+ L+  L + P 
Sbjct: 2563 GRSLSDLARYEEAIPCFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEALTRSLDLQPD 2622

Query: 618  NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN 677
            N    Y R      + +Y +A+  YD A+ +      K+     A+Y K +AL    +  
Sbjct: 2623 NANGWYDRGIALAELKQYEDAVASYDRAIAIN----RKY---ANAWYDKGVALVHLGRDT 2675

Query: 678  SEFCWFDIDGDIDPLF 693
                 F+    IDP F
Sbjct: 2676 DAIQAFENTTAIDPRF 2691



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 120/261 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIAQ   G+   AI  FD  L+ DP    A   +G A A       A++ +  A++ NP
Sbjct: 386 RGIAQARLGRNKEAIESFDAALQVDPSCASAAFQQGVAYASLGRFSEAVASYDRALRINP 445

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A   +G A + LG + +A+Q+  + + F+P +A   H++G+   K   F+ A+E  
Sbjct: 446 GLSDAIYHKGFALSKLGRTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAF 505

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + L      A    G AL  +G+++ A +A  +AI  +  ++ A+         L  
Sbjct: 506 DESLALKPGFAQAAFDKGAALIRLGKFEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLER 565

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              A+   +Q   ID   + + + RGL L  L +  +A+    + L I P N    Y + 
Sbjct: 566 FSDAITAFEQAAVIDPTHTLSLYHRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYEKG 625

Query: 627 SCYHAIGEYREAIKDYDAALD 647
                +  Y EA++++  AL+
Sbjct: 626 IALFHLLRYAEAVQEFHEALE 646



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 132/302 (43%), Gaps = 3/302 (0%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +T   ++  I     LS   RG+      ++  A+  FD +L   P    A   +G A 
Sbjct: 569 AITAFEQAAVIDPTHTLSLYHRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYEKGIAL 628

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                   A+ +F EA++ NP+    W   G + A +G   EA+   +KA+   P  A+ 
Sbjct: 629 FHLLRYAEAVQEFHEALEQNPALVNGWLYMGISLAHIGHLEEALPAFNKAIALNPKLAEA 688

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
              +GIV F  +    AV  L+  +  + ++   + Y GLALS++G + +A  +  KA++
Sbjct: 689 YVRKGIVLFTLERHEEAVSTLNRALDENAKDVYGWCYKGLALSALGRFDEAVRSFDKALE 748

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++R    A+         L    +A+    Q L +     K  + +G+ L    +  +AI
Sbjct: 749 INRRCARAFFERGNALLKLGKPLEAVVSYDQALELSPDDPKILYQKGMALTQRERFDEAI 808

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           +   S L ++P N    Y     Y     Y +AI+ +D A+ L+    + F  + +A  Q
Sbjct: 809 RAFESALALEPENASGAYYLGVAYAGRERYDDAIRAFDNAIALDPTQGQAFHFKGIALVQ 868

Query: 666 KE 667
           +E
Sbjct: 869 RE 870



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 142/302 (47%), Gaps = 13/302 (4%)

Query: 360 NEAKRNKKFCVTRISKSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQ 406
           ++A  +K F ++++ +++    +F  +             +G+  V  G++  AI  FD+
Sbjct: 448 SDAIYHKGFALSKLGRTEDAVQEFERTVAFDPKNAKAFHQKGLQLVKIGRFDEAIEAFDE 507

Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
            L   P + +A   +G A     + E A+  F +AI +N     A+ ++G     L    
Sbjct: 508 SLALKPGFAQAAFDKGAALIRLGKFEDALQAFDQAIVTNSKYVNAYYQKGLTLVQLERFS 567

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           +AI    +A   +P     L+ RG+   K K F  AV    A + +  EN +A    G+A
Sbjct: 568 DAITAFEQAAVIDPTHTLSLYHRGLTLGKLKRFMEAVVAFDAVLAISPENTNARYEKGIA 627

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
           L  +  Y +A +   +A++ +   +  W ++      + + E+AL    + + ++ + ++
Sbjct: 628 LFHLLRYAEAVQEFHEALEQNPALVNGWLYMGISLAHIGHLEEALPAFNKAIALNPKLAE 687

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY  +G++L  L +H++A+  L+  L  +  ++     +     A+G + EA++ +D AL
Sbjct: 688 AYVRKGIVLFTLERHEEAVSTLNRALDENAKDVYGWCYKGLALSALGRFDEAVRSFDKAL 747

Query: 647 DL 648
           ++
Sbjct: 748 EI 749



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 135/305 (44%), Gaps = 7/305 (2%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +GIA V   +Y  AI+ F   LK DP  P      G A    ++ + AI +F+ A + +P
Sbjct: 862  KGIALVQRERYTEAITAFLSALKRDPDNPVTHYYLGLAYLQDKQFKNAIPEFSRATELDP 921

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            S  +A+   G A AA+G   EA+    K+L   P   D +  R       + F+  VE  
Sbjct: 922  SLLDAYLYHGIALAAIGRHDEAVPLFDKSLAGNPTHIDAMTARARSLMVLERFSEVVETD 981

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               + L+      +   G AL+S    ++A  A+ KA++++  F EAW        DL  
Sbjct: 982  DRILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKGNALMDLNK 1041

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             + A+    + L I+      +  +G  L  LG+ + AI      L IDP N      + 
Sbjct: 1042 VQDAVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQG 1101

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
              +  +  Y++AI  +D A+ L   S+E       AF+ K +AL   ++       F+I 
Sbjct: 1102 KAFFDLTRYQDAIDAFDNAISLNQRSIE-------AFWYKGLALEKVNRHEGAIHVFEIL 1154

Query: 687  GDIDP 691
             +IDP
Sbjct: 1155 LEIDP 1159



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 126/262 (48%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G+A +   +Y  AI +FD+ L+ DP   +A+  +G A +       A+  + + +  + 
Sbjct: 3242 KGVALIRLERYEEAIKVFDRALEIDPACADAIYDKGRALSALGMYREAVKTYDKLLGIDA 3301

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               E    +G A A LG   +AI   +KAL+ +P +A   + +G+          A+E  
Sbjct: 3302 GNAEVSYDKGIALAHLGRHDDAIVAFNKALDLDPGNAQAAYHKGLSLATTGRHPDAIEAF 3361

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               ++ +  +   + + GL+L ++G+Y  A E++++AI +D +  EAW            
Sbjct: 3362 DRVIEREPGSVEGWVHRGLSLFALGKYNDAVESYVRAIAIDPSNAEAWYFKGSAIFASGG 3421

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             E A+E   + L     +  AY+ +G  L  +G  ++A+    + L +   N++ LY + 
Sbjct: 3422 YEDAIEAFNKALEFRPDYVSAYNDKGRSLFHMGMFREAVIAFDNALALQQKNVDALYHKG 3481

Query: 627  SCYHAIGEYREAIKDYDAALDL 648
            +    + +Y EAI+ +D AL +
Sbjct: 3482 TSLLRLEQYDEAIQAFDLALKI 3503



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 1/273 (0%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G+A    G++  A++ FD +L     +  AL  +G +    +  E A S    A+  N 
Sbjct: 2698 KGLALARLGEHQDAVTAFDGVLAISASFVPALTQKGLSLFQLQRYEEAASSLGAALDLNS 2757

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               EAW  +G A   LG   EAI    +A+  +P S  + +E+G+V    + ++AAV + 
Sbjct: 2758 GIFEAWYHQGLAYRHLGNVSEAIASFDQAISLDPRSFAVHYEKGLVLSGQEQWDAAVAEF 2817

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               ++ D   K AY  LGLAL ++ ++ +A +A  K   LD  + +A  +     + L  
Sbjct: 2818 RIAIECDGGKKEAYYALGLALHALEQFGEARDAFTKTAALDPGYADAHYYEGLSSEHLEQ 2877

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              +A+    + + +    + A++ +GL L  +G  + A          +P N   L    
Sbjct: 2878 YREAVSSFDRTIAVIADHAMAWYHKGLSLEHIGNDEDAADAFEHARRTEPDNPAILLSLG 2937

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
                 +G++  AI+ YD AL L L S  +F+L+
Sbjct: 2938 KARSRLGQFEMAIRIYDHALTL-LPSDGEFLLE 2969



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 114/270 (42%)

Query: 369  CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            C  R+ ++        L +G + ++ GK+A AI    + L   P        RG A A  
Sbjct: 2578 CFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEALTRSLDLQPDNANGWYDRGIALAEL 2637

Query: 429  RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            ++ E A++ +  AI  N     AW  +G A   LG   +AIQ        +P   +  ++
Sbjct: 2638 KQYEDAVASYDRAIAINRKYANAWYDKGVALVHLGRDTDAIQAFENTTAIDPRFMNAFYD 2697

Query: 489  RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            +G+   +  +   AV      + +      A T  GL+L  +  Y++A  +   A+ L+ 
Sbjct: 2698 KGLALARLGEHQDAVTAFDGVLAISASFVPALTQKGLSLFQLQRYEEAASSLGAALDLNS 2757

Query: 549  NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
               EAW H    Y+ L N  +A+    Q + +D R    ++ +GL+L G  Q   A+ + 
Sbjct: 2758 GIFEAWYHQGLAYRHLGNVSEAIASFDQAISLDPRSFAVHYEKGLVLSGQEQWDAAVAEF 2817

Query: 609  SSGLGIDPSNIECLYLRASCYHAIGEYREA 638
               +  D    E  Y      HA+ ++ EA
Sbjct: 2818 RIAIECDGGKKEAYYALGLALHALEQFGEA 2847



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 141/316 (44%), Gaps = 11/316 (3%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +GIA  + G++  AI  F++ L  DP   +A   +G + A       AI  F   I+  P
Sbjct: 3310 KGIALAHLGRHDDAIVAFNKALDLDPGNAQAAYHKGLSLATTGRHPDAIEAFDRVIEREP 3369

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
             + E W  RG +  ALG+  +A++   +A+  +P++A+  + +G   F    +  A+E  
Sbjct: 3370 GSVEGWVHRGLSLFALGKYNDAVESYVRAIAIDPSNAEAWYFKGSAIFASGGYEDAIEAF 3429

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            +  ++   +  SAY   G +L  +G +++A  A   A+ L +  ++A  H       L  
Sbjct: 3430 NKALEFRPDYVSAYNDKGRSLFHMGMFREAVIAFDNALALQQKNVDALYHKGTSLLRLEQ 3489

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             ++A++     L I    +  +  +G+ L  LG+ + A+   +  LGID  +    Y   
Sbjct: 3490 YDEAIQAFDLALKIRPNHAHLWTGKGIALSALGRDQDAVSFFTKALGIDSRDARAAYQLG 3549

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD-- 684
              Y  + +Y EAI+  + AL  +   +E       A YQK  AL      N     +D  
Sbjct: 3550 VSYLKLSKYHEAIRYLEGALAQQPACVE-------ANYQKGRALAMLGMHNDAITAYDKA 3602

Query: 685  IDGDIDPLFKEYWCKR 700
            I G  +  F E W  R
Sbjct: 3603 IAGKEN--FAEAWLYR 3616



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 135/295 (45%), Gaps = 5/295 (1%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G+A     ++  AI +F+ +L+ DP   +A   +G A A   +   AI  F + +Q  P
Sbjct: 1134 KGLALEKVNRHEGAIHVFEILLEIDPKNGDAQFHKGLALAVLGDHRDAIGSFDKTLQILP 1193

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
             +  AW  +G++   +G   +AI  L +A+E E +  +  +  G    K  D+  A+E  
Sbjct: 1194 DSAPAWYNKGKSLIEIGRYPDAIVALKRAIEIETSYTEAFYYLGYALLKTGDYTGAIEAF 1253

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               +  D  N   +   G+AL     +++A E+  K++  D     A+ H  + Y DL  
Sbjct: 1254 DRNLTRDGSNAPGHFNRGIALEKSRRFEEALESFDKSLIYDPGNALAFYHKGKVYADLGR 1313

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
               A     + L +  R++ A    G+  + LG+  ++I D    +  + ++ +  Y +A
Sbjct: 1314 HADAAFAFDKTLQLKPRYTDARLRMGIAEYNLGKFIESIHDFDKTIAENANSSQAHYYKA 1373

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSME-----KFVLQCLAFYQKEIALYTASKI 676
                 +  + EA+  YD AL L+ D+ +      F L  LA ++K I  +  +++
Sbjct: 1374 RALADLKRHEEAVGAYDLALRLDPDTADIHYYKGFSLMELAQFEKAIPEFERTEV 1428



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 135/300 (45%), Gaps = 7/300 (2%)

Query: 401  ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
            I  +++ L   PM+  +L  +G A       E AI  F  A++ +P+  +A   +G+A +
Sbjct: 3222 IDAYNRALALQPMHVPSLHRKGVALIRLERYEEAIKVFDRALEIDPACADAIYDKGRALS 3281

Query: 461  ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            ALG   EA++   K L  +  +A++ +++GI        + A+   +  + LD  N  A 
Sbjct: 3282 ALGMYREAVKTYDKLLGIDAGNAEVSYDKGIALAHLGRHDDAIVAFNKALDLDPGNAQAA 3341

Query: 521  TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
             + GL+L++ G +  A EA  + I+ +   +E W H       L     A+E   + + I
Sbjct: 3342 YHKGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLFALGKYNDAVESYVRAIAI 3401

Query: 581  DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
            D   ++A++ +G  +   G ++ AI+  +  L   P  +     +      +G +REA+ 
Sbjct: 3402 DPSNAEAWYFKGSAIFASGGYEDAIEAFNKALEFRPDYVSAYNDKGRSLFHMGMFREAVI 3461

Query: 641  DYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
             +D AL L+  +++       A Y K  +L    + +     FD+   I P     W  +
Sbjct: 3462 AFDNALALQQKNVD-------ALYHKGTSLLRLEQYDEAIQAFDLALKIRPNHAHLWTGK 3514



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 136/310 (43%), Gaps = 7/310 (2%)

Query: 382  DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
            +F L +GIA  +  ++  A  +  Q  +  P   E    RG +       + A+  F +A
Sbjct: 2965 EFLLEKGIALAHLERHEEAEVVLGQSTERLPDRFEPPFLRGLSLMLTGRYDDAVRSFDKA 3024

Query: 442  IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
            +  N +  + W  +  + A LG + EA+    K L   P+ A+    RG   +  K F+ 
Sbjct: 3025 LALNETDPDIWYHKAISLAHLGRAEEAVPAFDKVLGLRPDDAEAFLGRGRAYYTLKSFDR 3084

Query: 502  AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            A+E     +    ++ +A+   G+AL  +G Y++A  A  K ++ D    +A  +    Y
Sbjct: 3085 AIESFDRVIGYLPQHAAAWHEKGMALYDLGRYEEAIAAFDKTLEEDGGNHDALYYCALAY 3144

Query: 562  QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
              +    +A+E  + +L      + A++  GL L  L +HK AI      + + P   + 
Sbjct: 3145 AAIGKDAEAVESFELLLTRAPDNATAWYENGLALSRLKRHKDAIHAFDQAIRVRPDYFDA 3204

Query: 622  LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFC 681
              +RA  + ++G+ +E I  Y+ AL L+        +   + ++K +AL    +      
Sbjct: 3205 HEVRARSFDSLGDPKETIDAYNRALALQ-------PMHVPSLHRKGVALIRLERYEEAIK 3257

Query: 682  WFDIDGDIDP 691
             FD   +IDP
Sbjct: 3258 VFDRALEIDP 3267



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 34/311 (10%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G++    G++  AI  FD++++ +P   E  + RG +     +   A+  +  AI  +P
Sbjct: 3344 KGLSLATTGRHPDAIEAFDRVIEREPGSVEGWVHRGLSLFALGKYNDAVESYVRAIAIDP 3403

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            S  EAW  +G A  A G   +AI+  +KALEF P+     +++G   F    F  AV   
Sbjct: 3404 SNAEAWYFKGSAIFASGGYEDAIEAFNKALEFRPDYVSAYNDKGRSLFHMGMFREAVIAF 3463

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               + L ++N  A  + G +L  + +Y +A +A   A+++  N    W         L  
Sbjct: 3464 DNALALQQKNVDALYHKGTSLLRLEQYDEAIQAFDLALKIRPNHAHLWTGKGIALSALGR 3523

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             + A+    + L ID R ++A +  G+    L ++ +AI+ L   L   P+ +E  Y + 
Sbjct: 3524 DQDAVSFFTKALGIDSRDARAAYQLGVSYLKLSKYHEAIRYLEGALAQQPACVEANYQKG 3583

Query: 627  SCYHAIG----------------------------------EYREAIKDYDAALDLELDS 652
                 +G                                  +Y  AI DYD AL L  D 
Sbjct: 3584 RALAMLGMHNDAITAYDKAIAGKENFAEAWLYRGISQASLDQYDRAILDYDHALGLRPDY 3643

Query: 653  MEKFVLQCLAF 663
                + + +A 
Sbjct: 3644 APAHLFRGIAL 3654



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 157/366 (42%), Gaps = 15/366 (4%)

Query: 326  ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
            ES+ KS I D  ++ +   + K+   +  L   ++ A     F   +  + K    D RL
Sbjct: 1285 ESFDKSLIYDPGNALAFYHKGKV---YADLGRHADAA-----FAFDKTLQLKPRYTDARL 1336

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
              GIA+ N GK+  +I  FD+ + E+    +A   +  A A  +  E A+  +  A++ +
Sbjct: 1337 RMGIAEYNLGKFIESIHDFDKTIAENANSSQAHYYKARALADLKRHEEAVGAYDLALRLD 1396

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P   +    +G +   L +  +AI +  +     P +A   ++ G+   + +  N A++ 
Sbjct: 1397 PDTADIHYYKGFSLMELAQFEKAIPEFERTEVLTPANAMAFYQHGLALVRLERENDAIQV 1456

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            L   + L      A    GLAL+S+G Y+++ E+   A+  D    +A          L 
Sbjct: 1457 LDQSIALSPRYAPAQYQRGLALNSLGRYRESLESFDGALSADPQLADAALQKAIALASLG 1516

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
                AL      + I    ++A+H +G  L  L +  +A+      + IDP+N    + R
Sbjct: 1517 RHADALGAADVAIAIRPELAQAWHRKGTALAELDRVPEALAAFDRAIEIDPANARSHFER 1576

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                  +G + EAI+ +D +L L    +  +V    AFY K +AL            F+I
Sbjct: 1577 GLVLARLGRHIEAIQAFDQSLSL----IPNYV---PAFYNKGLALMAVGMHEEAVLSFNI 1629

Query: 686  DGDIDP 691
              +I P
Sbjct: 1630 ALEILP 1635



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 133/321 (41%), Gaps = 46/321 (14%)

Query: 376  SKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            +K++ +D R +R     G++ +   KY  AI   +  L + P   EA   +G A A    
Sbjct: 3532 TKALGIDSRDARAAYQLGVSYLKLSKYHEAIRYLEGALAQQPACVEANYQKGRALAMLGM 3591

Query: 431  LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
               AI+ + +AI    +  EAW  RG ++A+L +   AI D   AL   P+ A     RG
Sbjct: 3592 HNDAITAYDKAIAGKENFAEAWLYRGISQASLDQYDRAILDYDHALGLRPDYAPAHLFRG 3651

Query: 491  IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            I        + AVE  +  + ++ E   A  Y GLAL                       
Sbjct: 3652 IALIHLSRHDQAVEAFNHALTVEPEYPEALFYKGLAL----------------------- 3688

Query: 551  LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            LE         Q+L    +A+    Q L  + R+++A+H +G+ L   GQH++AI   ++
Sbjct: 3689 LE---------QELYT--EAIPVFDQALAANNRYAEAWHNKGVALARTGQHEEAIAAFNA 3737

Query: 611  GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
             LGI     E L+ R       G +REAI  +D  L L   +         A ++K  AL
Sbjct: 3738 ALGIRSDYAEALFERGRSLVHTGMFREAIASFDQVLILAPGNAN-------AHFEKGRAL 3790

Query: 671  YTASKINSEFCWFDIDGDIDP 691
                        FD   DI+P
Sbjct: 3791 IALGNHAGATAAFDRAIDINP 3811



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 119/288 (41%), Gaps = 35/288 (12%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
              +G A +  G +A A + FD+ +  +P   +AL G+G A  +Q   + AI+    A++ 
Sbjct: 3784 FEKGRALIALGNHAGATAAFDRAIDINPSCWQALAGKGRAETYQGNYDGAITALDRALEI 3843

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             P       ++G A AAL +  +A+Q   +ALE EP      H +GI   +   +  A+E
Sbjct: 3844 MPKKAILHDQKGLAYAALEQYRDAVQSYDRALEIEPLPRVFAH-KGIALAELGMYRDAIE 3902

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                 ++ D     A+   G     +G+Y  AE+A+ + + LD    EAW          
Sbjct: 3903 AFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDPENAEAWTRQGMVLSAQ 3962

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS-------------- 610
               E+ALE   + L ID  FS AY  RG  L  + ++++A++   +              
Sbjct: 3963 QKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRYQEAVEAFDAMLHIQPDFVDAYIH 4022

Query: 611  --------------------GLGIDPSNIECLYLRASCYHAIGEYREA 638
                                 L IDP+  EC          IG++ EA
Sbjct: 4023 KGRALQELELYQDALAVFKRALEIDPTRKECWNDIGDILDRIGKHEEA 4070



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 123/272 (45%)

Query: 381  VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            +D  L  GIA    G++  A+ +FD+ L  +P + +A+  R  +          +     
Sbjct: 924  LDAYLYHGIALAAIGRHDEAVPLFDKSLAGNPTHIDAMTARARSLMVLERFSEVVETDDR 983

Query: 441  AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
             +  NP+  + W ++G A A+     EAI   SKALE     A+    +G          
Sbjct: 984  ILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKGNALMDLNKVQ 1043

Query: 501  AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
             AV   S  ++++      +   G AL  +G+ + A  A+ K++++D +    W    + 
Sbjct: 1044 DAVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGKA 1103

Query: 561  YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            + DL   + A++     + +++R  +A+  +GL L  + +H+ AI      L IDP N +
Sbjct: 1104 FFDLTRYQDAIDAFDNAISLNQRSIEAFWYKGLALEKVNRHEGAIHVFEILLEIDPKNGD 1163

Query: 621  CLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
              + +      +G++R+AI  +D  L +  DS
Sbjct: 1164 AQFHKGLALAVLGDHRDAIGSFDKTLQILPDS 1195



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 115/260 (44%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G +  + G +  A+  FD  L       +AL  +GT+     + + AI  F  A++  P
Sbjct: 3446 KGRSLFHMGMFREAVIAFDNALALQQKNVDALYHKGTSLLRLEQYDEAIQAFDLALKIRP 3505

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            +    W  +G A +ALG   +A+   +KAL  +   A   ++ G+   K   ++ A+  L
Sbjct: 3506 NHAHLWTGKGIALSALGRDQDAVSFFTKALGIDSRDARAAYQLGVSYLKLSKYHEAIRYL 3565

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               +        A    G AL+ +G +  A  A+ KAI    NF EAW +       L  
Sbjct: 3566 EGALAQQPACVEANYQKGRALAMLGMHNDAITAYDKAIAGKENFAEAWLYRGISQASLDQ 3625

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             ++A+      L +   ++ A+  RG+ L  L +H +A++  +  L ++P   E L+ + 
Sbjct: 3626 YDRAILDYDHALGLRPDYAPAHLFRGIALIHLSRHDQAVEAFNHALTVEPEYPEALFYKG 3685

Query: 627  SCYHAIGEYREAIKDYDAAL 646
                    Y EAI  +D AL
Sbjct: 3686 LALLEQELYTEAIPVFDQAL 3705



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 121/262 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +GIA    G++  AIS +D  L  DP + +    +G A A     + AI  + +AI+  P
Sbjct: 114 KGIALYELGRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVP 173

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  +G +   LG   +A+   ++A E +P+   + + R  +  K      A +  
Sbjct: 174 GYARAYYNKGISLYELGNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFAAQSA 233

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +  + ++   +   G++L  +G Y +A +A  +A  ++ +  +AW +L     +   
Sbjct: 234 EKFLAQEPDHADIWAIRGMSLFKLGRYDEALDALRQATAINPDLSDAWYYLGLAGVETRQ 293

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + A+E   + L I    + A   RGL  + L Q+++A++D  S L  +P N E  Y R 
Sbjct: 294 FDDAVEAFTRNLEIHPGNAGALFHRGLAHYRLKQYREAVQDFDSTLEPEPGNKEAWYRRG 353

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
                +  Y EA++ ++  L L
Sbjct: 354 IACVNLSRYEEALESFNRRLGL 375



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 9/287 (3%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           +AQV  GK   A+   D++L       EA I +G A         AIS +  A+  +P  
Sbjct: 84  LAQV--GKNEEALEACDRLLAIRYDNAEAWILKGIALYELGRFTDAISAYDHALMIDPRH 141

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            + +  +G A A LG   EAI   +KA+E  P  A   + +GI  ++  + + A+   + 
Sbjct: 142 AKVYYNKGIALADLGRHQEAIYSYNKAIEIVPGYARAYYNKGISLYELGNLDDALSAFNR 201

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
             +LD ++   + Y    LS   + + A ++  K +  + +  + W         L   +
Sbjct: 202 AAELDPDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQEPDHADIWAIRGMSLFKLGRYD 261

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +AL+ L+Q   I+   S A++  GL      Q   A++  +  L I P N   L+ R   
Sbjct: 262 EALDALRQATAINPDLSDAWYYLGLAGVETRQFDDAVEAFTRNLEIHPGNAGALFHRGLA 321

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASK 675
           ++ + +YREA++D+D+ L+ E  + E       A+Y++ IA    S+
Sbjct: 322 HYRLKQYREAVQDFDSTLEPEPGNKE-------AWYRRGIACVNLSR 361



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 21/314 (6%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQ 443
             +RGIA     ++  A+  FD+ L  DP    A   +G   A   R  +AA + F + +Q
Sbjct: 1268 FNRGIALEKSRRFEEALESFDKSLIYDPGNALAFYHKGKVYADLGRHADAAFA-FDKTLQ 1326

Query: 444  SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
              P   +A  R G A   LG+ +E+I D  K +    NS+   + +       K    AV
Sbjct: 1327 LKPRYTDARLRMGIAEYNLGKFIESIHDFDKTIAENANSSQAHYYKARALADLKRHEEAV 1386

Query: 504  EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                  ++LD +    + Y G +L  + +++KA        + +R  +    +   FYQ 
Sbjct: 1387 GAYDLALRLDPDTADIHYYKGFSLMELAQFEKA------IPEFERTEVLTPANAMAFYQH 1440

Query: 564  ------LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                  L     A++ L Q + +  R++ A + RGL L+ LG+++++++     L  DP 
Sbjct: 1441 GLALVRLERENDAIQVLDQSIALSPRYAPAQYQRGLALNSLGRYRESLESFDGALSADPQ 1500

Query: 618  NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN 677
              +    +A    ++G + +A+   D A+ +  +  +       A+++K  AL    ++ 
Sbjct: 1501 LADAALQKAIALASLGRHADALGAADVAIAIRPELAQ-------AWHRKGTALAELDRVP 1553

Query: 678  SEFCWFDIDGDIDP 691
                 FD   +IDP
Sbjct: 1554 EALAAFDRAIEIDP 1567



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 129/308 (41%), Gaps = 9/308 (2%)

Query: 369  CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
             V R  K +++     L RG A +  G++ +A  +FD++   DP Y +    +G A   +
Sbjct: 2140 AVKRRPKDRTV----LLFRGKAFLRLGRWENAYGMFDKLTAIDPKYVKGWYYKGQALLAK 2195

Query: 429  RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
               E A+  F  AI    +   AW  +G+A  +L    EA+   ++ALE +P+  D  + 
Sbjct: 2196 DLYEDALLAFETAISLEETCAGAWYNKGRALGSLARHAEAVAAFNRALELQPDMRDAAYR 2255

Query: 489  RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            +G+        + AV    +   L  +    +   G +L  +  +++A E+  K I L  
Sbjct: 2256 KGLALAAQYLHSDAVAAFDSAASLGLDQGELWYCRGTSLMQLARWQEALESFNKTIALVP 2315

Query: 549  NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            +   AW +     Q L     A E  ++   +D     A   RG  L  L + ++AI   
Sbjct: 2316 DNAPAWLNKGLCLQKLNYHAAATEAFEKTSALDATSVPAAFGRGQSLAELDRDEEAIAAF 2375

Query: 609  SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK-----FVLQCLAF 663
            +  L +D +  E  YLR   Y  +  Y EAI  +D  +    D  +        LQ    
Sbjct: 2376 TRTLELDSTQAEAAYLRGCAYLRLALYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQGK 2435

Query: 664  YQKEIALY 671
            Y+K I  Y
Sbjct: 2436 YEKAIRSY 2443



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 148/677 (21%), Positives = 250/677 (36%), Gaps = 99/677 (14%)

Query: 52   WSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
            + KAIR     L     I D +     CY+ L  +   ++  D+ L+  P        K 
Sbjct: 2436 YEKAIRSYKQALTHDGSITDAVYQTGLCYAALNKNDQALKTFDRVLETLPERADILFHKS 2495

Query: 111  CAFSALGRKEEALS--------------VWE-KGYEHALHQSADLKQFLELEELLTAAKQ 155
             A   L R EEAL+              VWE KG    L++    ++ LE  +   A   
Sbjct: 2496 RALFRLMRYEEALTAIDASLAIENNDVAVWEQKG--STLYELGRFEESLEAYDRSLALNP 2553

Query: 156  DRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSEN-----HNKSDICDSSSQSRDVSET 210
            D S+TC Y    S+S L   E  +   D++ ET E        K     S  +     E 
Sbjct: 2554 D-SITCWYLKGRSLSDLARYEEAIPCFDRVIETDETCAGAWLRKGSSLLSLGKFAPAIEA 2612

Query: 211  CSKS-SHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSS----DGSKSTH 265
             ++S    PD  NG  D  +G +   + +    +    R ++ N   ++     G    H
Sbjct: 2613 LTRSLDLQPDNANGWYD--RGIALAELKQYEDAVASYDRAIAINRKYANAWYDKGVALVH 2670

Query: 266  ASRDASEIN---RQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSN 322
              RD   I      ++ D    N   DK     R G          D +++    L  S 
Sbjct: 2671 LGRDTDAIQAFENTTAIDPRFMNAFYDKGLALARLGEH-------QDAVTAFDGVLAISA 2723

Query: 323  TNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD 382
            +   + ++  +S  +     E+ S L    D+                       S   +
Sbjct: 2724 SFVPALTQKGLSLFQLQRYEEAASSLGAALDL----------------------NSGIFE 2761

Query: 383  FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
                +G+A  + G  + AI+ FDQ +  DP        +G   + Q + +AA+++F  AI
Sbjct: 2762 AWYHQGLAYRHLGNVSEAIASFDQAISLDPRSFAVHYEKGLVLSGQEQWDAAVAEFRIAI 2821

Query: 443  QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
            + +    EA+   G A  AL +  EA    +K    +P  AD  +  G+ +   + +  A
Sbjct: 2822 ECDGGKKEAYYALGLALHALEQFGEARDAFTKTAALDPGYADAHYYEGLSSEHLEQYREA 2881

Query: 503  VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA--HLKAIQLDRNFL-----EAWG 555
            V      + +  ++  A+ + GL+L  IG  + A +A  H +  + D   +     +A  
Sbjct: 2882 VSSFDRTIAVIADHAMAWYHKGLSLEHIGNDEDAADAFEHARRTEPDNPAILLSLGKARS 2941

Query: 556  HLTQFYQDLANSEKALECL----------------------------QQVLYIDKRFSKA 587
             L QF   +   + AL  L                            Q    +  RF   
Sbjct: 2942 RLGQFEMAIRIYDHALTLLPSDGEFLLEKGIALAHLERHEEAEVVLGQSTERLPDRFEPP 3001

Query: 588  YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            + LRGL L   G++  A++     L ++ ++ +  Y +A     +G   EA+  +D  L 
Sbjct: 3002 F-LRGLSLMLTGRYDDAVRSFDKALALNETDPDIWYHKAISLAHLGRAEEAVPAFDKVLG 3060

Query: 648  LELDSMEKFVLQCLAFY 664
            L  D  E F+ +  A+Y
Sbjct: 3061 LRPDDAEAFLGRGRAYY 3077



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 125/264 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GIA  + G++  AI  +++ ++  P Y  A   +G +      L+ A+S F  A + +
Sbjct: 147 NKGIALADLGRHQEAIYSYNKAIEIVPGYARAYYNKGISLYELGNLDDALSAFNRAAELD 206

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     W  R    +   ++  A Q   K L  EP+ ADI   RG+  FK   ++ A++ 
Sbjct: 207 PDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQEPDHADIWAIRGMSLFKLGRYDEALDA 266

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L     ++ +   A+ YLGLA     ++  A EA  + +++      A  H    +  L 
Sbjct: 267 LRQATAINPDLSDAWYYLGLAGVETRQFDDAVEAFTRNLEIHPGNAGALFHRGLAHYRLK 326

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +A++     L  +    +A++ RG+    L ++++A++  +  LG+  ++   LY R
Sbjct: 327 QYREAVQDFDSTLEPEPGNKEAWYRRGIACVNLSRYEEALESFNRRLGLGQNHAGSLYFR 386

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
                 +G  +EAI+ +DAAL ++
Sbjct: 387 GIAQARLGRNKEAIESFDAALQVD 410



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 137/291 (47%), Gaps = 3/291 (1%)

Query: 359  SNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYP 415
            S+E     +  V+   ++ ++  D  ++   +G++  + G    A   F+   + +P  P
Sbjct: 2871 SSEHLEQYREAVSSFDRTIAVIADHAMAWYHKGLSLEHIGNDEDAADAFEHARRTEPDNP 2930

Query: 416  EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
              L+  G AR+   + E AI  +  A+   PS GE    +G A A L    EA   L ++
Sbjct: 2931 AILLSLGKARSRLGQFEMAIRIYDHALTLLPSDGEFLLEKGIALAHLERHEEAEVVLGQS 2990

Query: 476  LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
             E  P+  +    RG+       ++ AV      + L++ +   + +  ++L+ +G  ++
Sbjct: 2991 TERLPDRFEPPFLRGLSLMLTGRYDDAVRSFDKALALNETDPDIWYHKAISLAHLGRAEE 3050

Query: 536  AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
            A  A  K + L  +  EA+    + Y  L + ++A+E   +V+    + + A+H +G+ L
Sbjct: 3051 AVPAFDKVLGLRPDDAEAFLGRGRAYYTLKSFDRAIESFDRVIGYLPQHAAAWHEKGMAL 3110

Query: 596  HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            + LG++++AI      L  D  N + LY  A  Y AIG+  EA++ ++  L
Sbjct: 3111 YDLGRYEEAIAAFDKTLEEDGGNHDALYYCALAYAAIGKDAEAVESFELLL 3161



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 118/285 (41%), Gaps = 34/285 (11%)

Query: 372  RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            RI       +D  + +G A  ++     AI  + + L+ +  + EA I +G A     ++
Sbjct: 983  RILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKGNALMDLNKV 1042

Query: 432  EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
            + A+  ++ A++ NP+  + W R+G A   LG++ +AI    K+L+ +P++      +G 
Sbjct: 1043 QDAVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGK 1102

Query: 492  VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
              F    +  A++     + L++ +  A+ Y GLAL  +  +                  
Sbjct: 1103 AFFDLTRYQDAIDAFDNAISLNQRSIEAFWYKGLALEKVNRH------------------ 1144

Query: 552  EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
                            E A+   + +L ID +   A   +GL L  LG H+ AI      
Sbjct: 1145 ----------------EGAIHVFEILLEIDPKNGDAQFHKGLALAVLGDHRDAIGSFDKT 1188

Query: 612  LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            L I P +    Y +      IG Y +AI     A+++E    E F
Sbjct: 1189 LQILPDSAPAWYNKGKSLIEIGRYPDAIVALKRAIEIETSYTEAF 1233



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 122/314 (38%), Gaps = 34/314 (10%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R  +GIA  +  +YA A+  F + L+++P      +  G + A    LE A+  F +AI 
Sbjct: 621 RYEKGIALFHLLRYAEAVQEFHEALEQNPALVNGWLYMGISLAHIGHLEEALPAFNKAIA 680

Query: 444 SNPSAGEAWKRRG----------------------------------QARAALGESVEAI 469
            NP   EA+ R+G                                   A +ALG   EA+
Sbjct: 681 LNPKLAEAYVRKGIVLFTLERHEEAVSTLNRALDENAKDVYGWCYKGLALSALGRFDEAV 740

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
           +   KALE     A    ERG    K      AV      ++L  ++       G+AL+ 
Sbjct: 741 RSFDKALEINRRCARAFFERGNALLKLGKPLEAVVSYDQALELSPDDPKILYQKGMALTQ 800

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
              + +A  A   A+ L+        +L   Y      + A+      + +D    +A+H
Sbjct: 801 RERFDEAIRAFESALALEPENASGAYYLGVAYAGRERYDDAIRAFDNAIALDPTQGQAFH 860

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            +G+ L    ++ +AI    S L  DP N    Y     Y    +++ AI ++  A +L+
Sbjct: 861 FKGIALVQRERYTEAITAFLSALKRDPDNPVTHYYLGLAYLQDKQFKNAIPEFSRATELD 920

Query: 650 LDSMEKFVLQCLAF 663
              ++ ++   +A 
Sbjct: 921 PSLLDAYLYHGIAL 934



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 123/265 (46%), Gaps = 38/265 (14%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSN 445
            +G A     +   A++ FD+ ++ DP    +   RG   A   R +EA I  F +++   
Sbjct: 1542 KGTALAELDRVPEALAAFDRAIEIDPANARSHFERGLVLARLGRHIEA-IQAFDQSLSLI 1600

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A+  +G A  A+G   EA+   + ALE  P+   +L+++G+   + + F  A+  
Sbjct: 1601 PNYVPAFYNKGLALMAVGMHEEAVLSFNIALEILPDDPAVLYQKGLALMRLESFEDAIGA 1660

Query: 506  LSACVKLDKENKSAYTYL-GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
              A + +D + K+ Y Y  GLAL+++G + +AE A   A+  D                 
Sbjct: 1661 FDAALAIDAQ-KTEYPYQKGLALAALGRHDEAEAAFSAALARD----------------- 1702

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             +++ AL                YH +GL L  LG+  +AI+DL+  +  +P       +
Sbjct: 1703 PDNQDAL----------------YH-KGLSLAELGRFSEAIEDLAKTVERNPKIANAWLI 1745

Query: 625  RASCYHAIGEYREAIKDYDAALDLE 649
            +  C  A+  Y +A+  YD AL+LE
Sbjct: 1746 QGFCLFAVERYSDALASYDKALELE 1770



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 116/255 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +GI   + G++  AI +FD+ L   P   +A   +G A     + E AI+ +  A+  
Sbjct: 10  LRQGIELYDLGRFQEAIVMFDRGLALYPRLAKAHYFKGIALYDLGKFEDAIAAYDMAVSI 69

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            PS   AW  +    A +G++ EA++   + L    ++A+    +GI  ++   F  A+ 
Sbjct: 70  EPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRYDNAEAWILKGIALYELGRFTDAIS 129

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                + +D  +   Y   G+AL+ +G +++A  ++ KAI++   +  A+ +      +L
Sbjct: 130 AYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVPGYARAYYNKGISLYEL 189

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N + AL    +   +D      ++ R  +L    Q++ A +     L  +P + +   +
Sbjct: 190 GNLDDALSAFNRAAELDPDDIWVWYYRSFILSKQDQNEFAAQSAEKFLAQEPDHADIWAI 249

Query: 625 RASCYHAIGEYREAI 639
           R      +G Y EA+
Sbjct: 250 RGMSLFKLGRYDEAL 264



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 120/264 (45%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            ++G+A +  G +  A+  F+  L+  P  P  L  +G A       E AI  F  A+  +
Sbjct: 1609 NKGLALMAVGMHEEAVLSFNIALEILPDDPAVLYQKGLALMRLESFEDAIGAFDAALAID 1668

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                E   ++G A AALG   EA    S AL  +P++ D L+ +G+   +   F+ A+ED
Sbjct: 1669 AQKTEYPYQKGLALAALGRHDEAEAAFSAALARDPDNQDALYHKGLSLAELGRFSEAIED 1728

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            L+  V+ + +  +A+   G  L ++  Y  A  ++ KA++L+      W +  +   +L 
Sbjct: 1729 LAKTVERNPKIANAWLIQGFCLFAVERYSDALASYDKALELETQNPHTWFYKGRTCLNLG 1788

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            N   A+   +Q + I   F +A++  G  L    +  +A         + P   E    +
Sbjct: 1789 NDSDAVLAFEQAIKIVPDFGEAFYYMGQALFRQKKLAEAAVAFEEANRLMPDFTEAFQEK 1848

Query: 626  ASCYHAIGEYREAIKDYDAALDLE 649
               + A+G YREA   ++  L ++
Sbjct: 1849 GRTFFALGRYREAAAAFEQVLAMQ 1872



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 120/266 (45%), Gaps = 2/266 (0%)

Query: 375  KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
            + + ++  + L+R + ++   K   AI  + ++ +  P    A + RG A    RE E A
Sbjct: 1872 QPRDLNATYGLARSLDRLGSAK--EAIPAYAKVNRIAPDCERAFLYRGFAHLQVREYEDA 1929

Query: 435  ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
            ++ FT  ++ NP+  +AW  +G+A   L +  +A++     L  +P+   IL ++G+   
Sbjct: 1930 VAAFTRVVEINPANTDAWHEKGKALVVLEKYAKALEAFDGYLGQKPDDPVILCQKGLSLV 1989

Query: 495  KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            K   F  A+   ++ +         +T   L    +G  ++   +  +A+ LD +   A 
Sbjct: 1990 KLDRFEDALAAFTSAIDKGMNTPGVHTEQALCFLKLGRDEEVIRSADRALALDSSETRAL 2049

Query: 555  GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                +    L   E+A+     V+  D    +A   RG+ L  LG+++ A+ +L   L  
Sbjct: 2050 LAKGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGRYEDAVIELDHALEN 2109

Query: 615  DPSNIECLYLRASCYHAIGEYREAIK 640
            D +N + L  +    + +  Y+E ++
Sbjct: 2110 DATNADLLTCKGYSLYRLARYKETVE 2135



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 117/262 (44%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            ++G A  +  ++A A++ F++ L+  P   +A   +G A A Q     A++ F  A    
Sbjct: 2221 NKGRALGSLARHAEAVAAFNRALELQPDMRDAAYRKGLALAAQYLHSDAVAAFDSAASLG 2280

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               GE W  RG +   L    EA++  +K +   P++A     +G+   K     AA E 
Sbjct: 2281 LDQGELWYCRGTSLMQLARWQEALESFNKTIALVPDNAPAWLNKGLCLQKLNYHAAATEA 2340

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                  LD  +  A    G +L+ +   ++A  A  + ++LD    EA       Y  LA
Sbjct: 2341 FEKTSALDATSVPAAFGRGQSLAELDRDEEAIAAFTRTLELDSTQAEAAYLRGCAYLRLA 2400

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
               +A+      +      +++++ RGL L   G+++KAI+     L  D S  + +Y  
Sbjct: 2401 LYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQGKYEKAIRSYKQALTHDGSITDAVYQT 2460

Query: 626  ASCYHAIGEYREAIKDYDAALD 647
              CY A+ +  +A+K +D  L+
Sbjct: 2461 GLCYAALNKNDQALKTFDRVLE 2482



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/316 (21%), Positives = 140/316 (44%), Gaps = 13/316 (4%)

Query: 400  AISIFDQILKEDPMYPEALI--GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
            A+  FD++L+  P   + L    R   R  + E      D + AI++N  A   W+++G 
Sbjct: 2473 ALKTFDRVLETLPERADILFHKSRALFRLMRYEEALTAIDASLAIENNDVA--VWEQKGS 2530

Query: 458  ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
                LG   E+++   ++L   P+S    + +G        +  A+      ++ D+   
Sbjct: 2531 TLYELGRFEESLEAYDRSLALNPDSITCWYLKGRSLSDLARYEEAIPCFDRVIETDETCA 2590

Query: 518  SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
             A+   G +L S+G++  A EA  +++ L  +    W        +L   E A+    + 
Sbjct: 2591 GAWLRKGSSLLSLGKFAPAIEALTRSLDLQPDNANGWYDRGIALAELKQYEDAVASYDRA 2650

Query: 578  LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
            + I+++++ A++ +G+ L  LG+   AI+   +   IDP  +   Y +      +GE+++
Sbjct: 2651 IAINRKYANAWYDKGVALVHLGRDTDAIQAFENTTAIDPRFMNAFYDKGLALARLGEHQD 2710

Query: 638  AIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYW 697
            A+  +D  L +    +     + L+ +Q +     AS + +     D++  I   F+ ++
Sbjct: 2711 AVTAFDGVLAISASFVPALTQKGLSLFQLQRYEEAASSLGAA---LDLNSGI---FEAWY 2764

Query: 698  CKRL---HPKNVCEKV 710
             + L   H  NV E +
Sbjct: 2765 HQGLAYRHLGNVSEAI 2780



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 127/312 (40%), Gaps = 34/312 (10%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G+A     ++  AI  F+  L  +P         G A A +   + AI  F  AI  +P
Sbjct: 794  KGMALTQRERFDEAIRAFESALALEPENASGAYYLGVAYAGRERYDDAIRAFDNAIALDP 853

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            + G+A+  +G A        EAI     AL+ +P++    +  G+   + K F  A+ + 
Sbjct: 854  TQGQAFHFKGIALVQRERYTEAITAFLSALKRDPDNPVTHYYLGLAYLQDKQFKNAIPEF 913

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKA----------EEAHLKA------------- 543
            S   +LD     AY Y G+AL++IG + +A             H+ A             
Sbjct: 914  SRATELDPSLLDAYLYHGIALAAIGRHDEAVPLFDKSLAGNPTHIDAMTARARSLMVLER 973

Query: 544  -----------IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
                       + L+   ++ W             ++A+    + L I+  F++A+  +G
Sbjct: 974  FSEVVETDDRILSLNPTLIDTWMQKGDALASQLLKQEAIGAYSKALEINSGFAEAWIRKG 1033

Query: 593  LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
              L  L + + A+   S  L I+P+  +    +      +G+  +AI  Y  +L ++ D+
Sbjct: 1034 NALMDLNKVQDAVGAYSRALEINPALCDIWMRKGDALQQLGKTEDAILAYGKSLKIDPDN 1093

Query: 653  MEKFVLQCLAFY 664
               ++ Q  AF+
Sbjct: 1094 EPGWIRQGKAFF 1105



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 83/190 (43%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +GIA    G Y  AI  FD+ ++ D    EA +G+G  +    +   A   +   +  +P
Sbjct: 3887 KGIALAELGMYRDAIEAFDKAIEHDGNLAEAWMGKGNVQYDLGKYADAEKAYERGLALDP 3946

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               EAW R+G   +A  +  EA++   +AL  +P  +     RG      K +  AVE  
Sbjct: 3947 ENAEAWTRQGMVLSAQQKFEEALEHYDRALMIDPTFSIAYFTRGSALIAMKRYQEAVEAF 4006

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
             A + +  +   AY + G AL  +  Y+ A     +A+++D    E W  +      +  
Sbjct: 4007 DAMLHIQPDFVDAYIHKGRALQELELYQDALAVFKRALEIDPTRKECWNDIGDILDRIGK 4066

Query: 567  SEKALECLQQ 576
             E+A  C ++
Sbjct: 4067 HEEARICYEK 4076



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 98/209 (46%), Gaps = 7/209 (3%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           A+ L  +GI  +    F  A+      + L      A+ + G+AL  +G+++ A  A+  
Sbjct: 6   AEALLRQGIELYDLGRFQEAIVMFDRGLALYPRLAKAHYFKGIALYDLGKFEDAIAAYDM 65

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           A+ ++ +   AW +       +  +E+ALE   ++L I    ++A+ L+G+ L+ LG+  
Sbjct: 66  AVSIEPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRYDNAEAWILKGIALYELGRFT 125

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            AI      L IDP + +  Y +      +G ++EAI  Y+ A+++             A
Sbjct: 126 DAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVPGYAR-------A 178

Query: 663 FYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +Y K I+LY    ++     F+   ++DP
Sbjct: 179 YYNKGISLYELGNLDDALSAFNRAAELDP 207



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 4/252 (1%)

Query: 405  DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
            D+ L  D     AL+ +G + A     E A++ F   I  +     A + RG +   LG 
Sbjct: 2036 DRALALDSSETRALLAKGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGR 2095

Query: 465  SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
              +A+ +L  ALE +  +AD+L  +G   ++   +   VE L   VK   ++++   + G
Sbjct: 2096 YEDAVIELDHALENDATNADLLTCKGYSLYRLARYKETVEYLGKAVKRRPKDRTVLLFRG 2155

Query: 525  LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDK 582
             A   +G ++ A     K   +D  +++ W +  Q    +DL   E AL   +  + +++
Sbjct: 2156 KAFLRLGRWENAYGMFDKLTAIDPKYVKGWYYKGQALLAKDL--YEDALLAFETAISLEE 2213

Query: 583  RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
              + A++ +G  L  L +H +A+   +  L + P   +  Y +     A   + +A+  +
Sbjct: 2214 TCAGAWYNKGRALGSLARHAEAVAAFNRALELQPDMRDAAYRKGLALAAQYLHSDAVAAF 2273

Query: 643  DAALDLELDSME 654
            D+A  L LD  E
Sbjct: 2274 DSAASLGLDQGE 2285



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 112/268 (41%)

Query: 382  DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
            D  + +G A    GK   AI  + + LK DP      I +G A       + AI  F  A
Sbjct: 1061 DIWMRKGDALQQLGKTEDAILAYGKSLKIDPDNEPGWIRQGKAFFDLTRYQDAIDAFDNA 1120

Query: 442  IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
            I  N  + EA+  +G A   +     AI      LE +P + D    +G+      D   
Sbjct: 1121 ISLNQRSIEAFWYKGLALEKVNRHEGAIHVFEILLEIDPKNGDAQFHKGLALAVLGDHRD 1180

Query: 502  AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            A+      +++  ++  A+   G +L  IG Y  A  A  +AI+++ ++ EA+ +L    
Sbjct: 1181 AIGSFDKTLQILPDSAPAWYNKGKSLIEIGRYPDAIVALKRAIEIETSYTEAFYYLGYAL 1240

Query: 562  QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
                +   A+E   + L  D   +  +  RG+ L    + ++A++     L  DP N   
Sbjct: 1241 LKTGDYTGAIEAFDRNLTRDGSNAPGHFNRGIALEKSRRFEEALESFDKSLIYDPGNALA 1300

Query: 622  LYLRASCYHAIGEYREAIKDYDAALDLE 649
             Y +   Y  +G + +A   +D  L L+
Sbjct: 1301 FYHKGKVYADLGRHADAAFAFDKTLQLK 1328



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 4/211 (1%)

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N S  EA  R+G     LG   EAI    + L   P  A   + +GI  +    F  A+ 
Sbjct: 2   NKSDAEALLRQGIELYDLGRFQEAIVMFDRGLALYPRLAKAHYFKGIALYDLGKFEDAIA 61

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA--HLKAIQLDRNFLEAWGHLTQFYQ 562
                V ++  + +A+      L+ +G+ ++A EA   L AI+ D    EAW        
Sbjct: 62  AYDMAVSIEPSDPNAWYNKAATLAQVGKNEEALEACDRLLAIRYDNA--EAWILKGIALY 119

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +L     A+      L ID R +K Y+ +G+ L  LG+H++AI   +  + I P      
Sbjct: 120 ELGRFTDAISAYDHALMIDPRHAKVYYNKGIALADLGRHQEAIYSYNKAIEIVPGYARAY 179

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSM 653
           Y +    + +G   +A+  ++ A +L+ D +
Sbjct: 180 YNKGISLYELGNLDDALSAFNRAAELDPDDI 210



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 137/301 (45%), Gaps = 7/301 (2%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG + +   ++  A+  F++ +   P    A + +G          AA   F +    + 
Sbjct: 2290 RGTSLMQLARWQEALESFNKTIALVPDNAPAWLNKGLCLQKLNYHAAATEAFEKTSALDA 2349

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            ++  A   RGQ+ A L    EAI   ++ LE +   A+  + RG    +   +  A+   
Sbjct: 2350 TSVPAAFGRGQSLAELDRDEEAIAAFTRTLELDSTQAEAAYLRGCAYLRLALYTEAISSF 2409

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               ++   ++  ++   GLAL + G+Y+KA  ++ +A+  D +  +A       Y  L  
Sbjct: 2410 DYTIQYAPDHAQSHYRRGLALQAQGKYEKAIRSYKQALTHDGSITDAVYQTGLCYAALNK 2469

Query: 567  SEKALECLQQVL-YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +++AL+   +VL  + +R    +H +   L  L ++++A+  + + L I+ +++     +
Sbjct: 2470 NDQALKTFDRVLETLPERADILFH-KSRALFRLMRYEEALTAIDASLAIENNDVAVWEQK 2528

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC-----LAFYQKEIALYTASKINSEF 680
             S  + +G + E+++ YD +L L  DS+  + L+      LA Y++ I  +       E 
Sbjct: 2529 GSTLYELGRFEESLEAYDRSLALNPDSITCWYLKGRSLSDLARYEEAIPCFDRVIETDET 2588

Query: 681  C 681
            C
Sbjct: 2589 C 2589



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 111/263 (42%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            L++G+       +A+A   F++    D     A  GRG + A     E AI+ FT  ++ 
Sbjct: 2322 LNKGLCLQKLNYHAAATEAFEKTSALDATSVPAAFGRGQSLAELDRDEEAIAAFTRTLEL 2381

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            + +  EA   RG A   L    EAI      +++ P+ A   + RG+       +  A+ 
Sbjct: 2382 DSTQAEAAYLRGCAYLRLALYTEAISSFDYTIQYAPDHAQSHYRRGLALQAQGKYEKAIR 2441

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                 +  D     A    GL  +++ +  +A +   + ++      +   H ++    L
Sbjct: 2442 SYKQALTHDGSITDAVYQTGLCYAALNKNDQALKTFDRVLETLPERADILFHKSRALFRL 2501

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               E+AL  +   L I+      +  +G  L+ LG+ +++++     L ++P +I C YL
Sbjct: 2502 MRYEEALTAIDASLAIENNDVAVWEQKGSTLYELGRFEESLEAYDRSLALNPDSITCWYL 2561

Query: 625  RASCYHAIGEYREAIKDYDAALD 647
            +      +  Y EAI  +D  ++
Sbjct: 2562 KGRSLSDLARYEEAIPCFDRVIE 2584



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 112/279 (40%), Gaps = 6/279 (2%)

Query: 395  GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA--AISDFTEAIQSNPSAGEAW 452
            G+Y  A + F+Q+L   P    A  G   AR+  R   A  AI  + +  +  P    A+
Sbjct: 1856 GRYREAAAAFEQVLAMQPRDLNATYG--LARSLDRLGSAKEAIPAYAKVNRIAPDCERAF 1913

Query: 453  KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
              RG A   + E  +A+   ++ +E  P + D  HE+G      + +  A+E     +  
Sbjct: 1914 LYRGFAHLQVREYEDAVAAFTRVVEINPANTDAWHEKGKALVVLEKYAKALEAFDGYLGQ 1973

Query: 513  DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
              ++       GL+L  +  ++ A  A   AI    N           +  L   E+ + 
Sbjct: 1974 KPDDPVILCQKGLSLVKLDRFEDALAAFTSAIDKGMNTPGVHTEQALCFLKLGRDEEVIR 2033

Query: 573  CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
               + L +D   ++A   +G  L  LG+H++A+      +  D  N      R      +
Sbjct: 2034 SADRALALDSSETRALLAKGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQL 2093

Query: 633  GEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
            G Y +A+ + D A  LE D+    +L C  +    +A Y
Sbjct: 2094 GRYEDAVIELDHA--LENDATNADLLTCKGYSLYRLARY 2130



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 4/270 (1%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            L++G +    G++  A++ FD ++  D     A  GRG +       E A+ +   A+++
Sbjct: 2050 LAKGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGRYEDAVIELDHALEN 2109

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            + +  +    +G +   L    E ++ L KA++  P    +L  RG    +   +  A  
Sbjct: 2110 DATNADLLTCKGYSLYRLARYKETVEYLGKAVKRRPKDRTVLLFRGKAFLRLGRWENAYG 2169

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                   +D +    + Y G AL +   Y+ A  A   AI L+     AW +  +    L
Sbjct: 2170 MFDKLTAIDPKYVKGWYYKGQALLAKDLYEDALLAFETAISLEETCAGAWYNKGRALGSL 2229

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGLGIDPSNIECL 622
            A   +A+    + L +      A + +GL L     H  A+   D ++ LG+D    E  
Sbjct: 2230 ARHAEAVAAFNRALELQPDMRDAAYRKGLALAAQYLHSDAVAAFDSAASLGLDQG--ELW 2287

Query: 623  YLRASCYHAIGEYREAIKDYDAALDLELDS 652
            Y R +    +  ++EA++ ++  + L  D+
Sbjct: 2288 YCRGTSLMQLARWQEALESFNKTIALVPDN 2317



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 107/262 (40%)

Query: 381  VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
             ++   +G+A    G++  A + F   L  DP   +AL  +G + A       AI D  +
Sbjct: 1672 TEYPYQKGLALAALGRHDEAEAAFSAALARDPDNQDALYHKGLSLAELGRFSEAIEDLAK 1731

Query: 441  AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
             ++ NP    AW  +G    A+    +A+    KALE E  +      +G       + +
Sbjct: 1732 TVERNPKIANAWLIQGFCLFAVERYSDALASYDKALELETQNPHTWFYKGRTCLNLGNDS 1791

Query: 501  AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
             AV      +K+  +   A+ Y+G AL    +  +A  A  +A +L  +F EA+    + 
Sbjct: 1792 DAVLAFEQAIKIVPDFGEAFYYMGQALFRQKKLAEAAVAFEEANRLMPDFTEAFQEKGRT 1851

Query: 561  YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            +  L    +A    +QVL +  R   A +     L  LG  K+AI   +    I P    
Sbjct: 1852 FFALGRYREAAAAFEQVLAMQPRDLNATYGLARSLDRLGSAKEAIPAYAKVNRIAPDCER 1911

Query: 621  CLYLRASCYHAIGEYREAIKDY 642
                R   +  + EY +A+  +
Sbjct: 1912 AFLYRGFAHLQVREYEDAVAAF 1933



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 67/290 (23%), Positives = 110/290 (37%), Gaps = 18/290 (6%)

Query: 369  CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
              TR+ +    + D    +G A V   KYA A+  FD  L + P  P  L  +G +    
Sbjct: 1932 AFTRVVEINPANTDAWHEKGKALVVLEKYAKALEAFDGYLGQKPDDPVILCQKGLSLVKL 1991

Query: 429  RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
               E A++ FT AI    +       +      LG   E I+   +AL  + +    L  
Sbjct: 1992 DRFEDALAAFTSAIDKGMNTPGVHTEQALCFLKLGRDEEVIRSADRALALDSSETRALLA 2051

Query: 489  RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            +G    +      AV      +  D EN  A    G++L  +G Y+ A       I+LD 
Sbjct: 2052 KGESLARLGRHEEAVAAFDGVIARDAENDRARRGRGVSLVQLGRYEDA------VIELDH 2105

Query: 549  ---------NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
                     + L   G+    Y+ LA  ++ +E L + +    +       RG     LG
Sbjct: 2106 ALENDATNADLLTCKGY--SLYR-LARYKETVEYLGKAVKRRPKDRTVLLFRGKAFLRLG 2162

Query: 600  QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            + + A         IDP  ++  Y +     A   Y +A+  ++ A+ LE
Sbjct: 2163 RWENAYGMFDKLTAIDPKYVKGWYYKGQALLAKDLYEDALLAFETAISLE 2212



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 45/260 (17%), Positives = 111/260 (42%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G++    G+++ AI    + ++ +P    A + +G           A++ + +A++   
Sbjct: 1712 KGLSLAELGRFSEAIEDLAKTVERNPKIANAWLIQGFCLFAVERYSDALASYDKALELET 1771

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                 W  +G+    LG   +A+    +A++  P+  +  +  G   F+ K    A    
Sbjct: 1772 QNPHTWFYKGRTCLNLGNDSDAVLAFEQAIKIVPDFGEAFYYMGQALFRQKKLAEAAVAF 1831

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
                +L  +   A+   G    ++G Y++A  A  + + +    L A   L +    L +
Sbjct: 1832 EEANRLMPDFTEAFQEKGRTFFALGRYREAAAAFEQVLAMQPRDLNATYGLARSLDRLGS 1891

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            +++A+    +V  I     +A+  RG     + +++ A+   +  + I+P+N +  + + 
Sbjct: 1892 AKEAIPAYAKVNRIAPDCERAFLYRGFAHLQVREYEDAVAAFTRVVEINPANTDAWHEKG 1951

Query: 627  SCYHAIGEYREAIKDYDAAL 646
                 + +Y +A++ +D  L
Sbjct: 1952 KALVVLEKYAKALEAFDGYL 1971



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 34/52 (65%)

Query: 77  FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
             Y Q +  K+ I +  +A +LDP+LL AY+  G A +A+GR +EA+ +++K
Sbjct: 898 LAYLQDKQFKNAIPEFSRATELDPSLLDAYLYHGIALAAIGRHDEAVPLFDK 949



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 7/120 (5%)

Query: 12   RLNKTHKTICEIDELVRV--DSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYE 68
            RL +    I   D+ +RV  D   A  + AR       SL +  + I   +  LA Q   
Sbjct: 3180 RLKRHKDAIHAFDQAIRVRPDYFDAHEVRAR----SFDSLGDPKETIDAYNRALALQPMH 3235

Query: 69   IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
            +  +  +     +LE ++  I+  D+AL++DP    A   KG A SALG   EA+  ++K
Sbjct: 3236 VPSLHRKGVALIRLERYEEAIKVFDRALEIDPACADAIYDKGRALSALGMYREAVKTYDK 3295



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 34/53 (64%)

Query: 75   RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
            +A C+ +L   + VIR  D+AL LD +  +A + KG + + LGR EEA++ ++
Sbjct: 2018 QALCFLKLGRDEEVIRSADRALALDSSETRALLAKGESLARLGRHEEAVAAFD 2070


>gi|434392514|ref|YP_007127461.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
           PCC 7428]
 gi|428264355|gb|AFZ30301.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
           PCC 7428]
          Length = 291

 Score =  113 bits (282), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 67/219 (30%), Positives = 117/219 (53%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +++ AI+ FTE I+ +P    A++ RG AR  LG+   AI D ++A+   PN+A   + R
Sbjct: 52  DIQGAIASFTEVIRLDPGNAAAYENRGNARDDLGDHQGAIADYNQAININPNNATTYYNR 111

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           GI   +  +  AA+ D +  +  + +  SAY   G+   ++G+   A     +AIQL+ N
Sbjct: 112 GIAYDRLGNNEAAIADYNRAIAFNPKFASAYNSRGILRFALGDELNAMADFNQAIQLEPN 171

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
               + +     +   ++  A+    QVL ++ + + AY  RG+  +  G+H+ AI D +
Sbjct: 172 RPGFYYNRGNARRRRGDNRGAILDYTQVLQLNPKDADAYFNRGIARYNEGEHQSAIADFN 231

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             L I+P+  E  Y RA CY AIG  ++A++D+  A +L
Sbjct: 232 QALQINPNYAEAYYNRALCYSAIGNNQQALQDFQQAANL 270



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 57/191 (29%), Positives = 101/191 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ + G +  AI+ ++Q +  +P        RG A       EAAI+D+  AI  N
Sbjct: 76  NRGNARDDLGDHQGAIADYNQAININPNNATTYYNRGIAYDRLGNNEAAIADYNRAIAFN 135

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG  R ALG+ + A+ D ++A++ EPN     + RG    +  D   A+ D
Sbjct: 136 PKFASAYNSRGILRFALGDELNAMADFNQAIQLEPNRPGFYYNRGNARRRRGDNRGAILD 195

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+ ++  AY   G+A  + GE++ A     +A+Q++ N+ EA+ +    Y  + 
Sbjct: 196 YTQVLQLNPKDADAYFNRGIARYNEGEHQSAIADFNQALQINPNYAEAYYNRALCYSAIG 255

Query: 566 NSEKALECLQQ 576
           N+++AL+  QQ
Sbjct: 256 NNQQALQDFQQ 266



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 59/223 (26%), Positives = 110/223 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+ Q ++G    AI+ F ++++ DP    A   RG AR    + + AI+D+ +AI  N
Sbjct: 42  NQGVKQYSDGDIQGAIASFTEVIRLDPGNAAAYENRGNARDDLGDHQGAIADYNQAININ 101

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    +  RG A   LG +  AI D ++A+ F P  A   + RGI+ F   D   A+ D
Sbjct: 102 PNNATTYYNRGIAYDRLGNNEAAIADYNRAIAFNPKFASAYNSRGILRFALGDELNAMAD 161

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+      Y   G A    G+ + A   + + +QL+    +A+ +      +  
Sbjct: 162 FNQAIQLEPNRPGFYYNRGNARRRRGDNRGAILDYTQVLQLNPKDADAYFNRGIARYNEG 221

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             + A+    Q L I+  +++AY+ R L    +G +++A++D 
Sbjct: 222 EHQSAIADFNQALQINPNYAEAYYNRALCYSAIGNNQQALQDF 264



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 7/214 (3%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + +G+  +   D   A+   +  ++LD  N +AY   G A   +G+++ A   + +AI +
Sbjct: 41  YNQGVKQYSDGDIQGAIASFTEVIRLDPGNAAAYENRGNARDDLGDHQGAIADYNQAINI 100

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           + N    + +    Y  L N+E A+    + +  + +F+ AY+ RG+L   LG    A+ 
Sbjct: 101 NPNNATTYYNRGIAYDRLGNNEAAIADYNRAIAFNPKFASAYNSRGILRFALGDELNAMA 160

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           D +  + ++P+     Y R +     G+ R AI DY   L L     +       A++ +
Sbjct: 161 DFNQAIQLEPNRPGFYYNRGNARRRRGDNRGAILDYTQVLQLNPKDAD-------AYFNR 213

Query: 667 EIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            IA Y   +  S    F+    I+P + E +  R
Sbjct: 214 GIARYNEGEHQSAIADFNQALQINPNYAEAYYNR 247



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/137 (29%), Positives = 68/137 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRGI +   G   +A++ F+Q ++ +P  P     RG AR  + +   AI D+T+ +Q N
Sbjct: 144 SRGILRFALGDELNAMADFNQAIQLEPNRPGFYYNRGNARRRRGDNRGAILDYTQVLQLN 203

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG AR   GE   AI D ++AL+  PN A+  + R +      +   A++D
Sbjct: 204 PKDADAYFNRGIARYNEGEHQSAIADFNQALQINPNYAEAYYNRALCYSAIGNNQQALQD 263

Query: 506 LSACVKLDKENKSAYTY 522
                 L ++ +    Y
Sbjct: 264 FQQAANLYEQQQKPEYY 280



 Score = 44.3 bits (103), Expect = 0.41,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 39/71 (54%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T++ +      D   +RGIA+ NEG++ SAI+ F+Q L+ +P Y EA   R    +    
Sbjct: 197 TQVLQLNPKDADAYFNRGIARYNEGEHQSAIADFNQALQINPNYAEAYYNRALCYSAIGN 256

Query: 431 LEAAISDFTEA 441
            + A+ DF +A
Sbjct: 257 NQQALQDFQQA 267


>gi|428310718|ref|YP_007121695.1| hypothetical protein Mic7113_2488 [Microcoleus sp. PCC 7113]
 gi|428252330|gb|AFZ18289.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
          Length = 548

 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 143/276 (51%), Gaps = 1/276 (0%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF L++GI ++   +Y  AI  F Q ++ +  Y +A + RG  R    + + AI+D+T+ 
Sbjct: 146 DF-LNQGIEKLQNEQYKEAIEDFTQAIEINSQYADAYLLRGCTRIEIDDYQGAIADYTQT 204

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ  P   + +  RG+   AL +   AI D +++++  P  A+  + RG ++    +   
Sbjct: 205 IQLLPDDSDIYFMRGKGYIALDDYKSAIADFTQSIKINPQYAEAYYLRGCIHSDIGNHQE 264

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  +++D     AY   G  L++  +YK+A   + ++I+LD +  + +    + Y
Sbjct: 265 AIADYTQTIQIDPSYVDAYRNRGHLLAAQEDYKEAISDYSESIRLDPSDADIYFRRGKAY 324

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             L N + A+    QV+ ID ++S AY +RG L   L  ++ AI D +  +  +P++ + 
Sbjct: 325 IALENYKSAIGDYTQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEVIKTNPNHADA 384

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
            + R     AI +Y+ AI+D+   + +  + +  ++
Sbjct: 385 YFQRGQARIAIKDYKGAIQDFTEVIKINPNEVAPYL 420



 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 12/311 (3%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D    RG   +    Y SAI+ F Q +K +P Y EA   RG   +     + AI+D+T+ 
Sbjct: 213 DIYFMRGKGYIALDDYKSAIADFTQSIKINPQYAEAYYLRGCIHSDIGNHQEAIADYTQT 272

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ +PS  +A++ RG   AA  +  EAI D S+++  +P+ ADI   RG      +++ +
Sbjct: 273 IQIDPSYVDAYRNRGHLLAAQEDYKEAISDYSESIRLDPSDADIYFRRGKAYIALENYKS 332

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  +K+D +   AY   G   + + +Y+ A     + I+ + N  +A+    Q  
Sbjct: 333 AIGDYTQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEVIKTNPNHADAYFQRGQAR 392

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             + + + A++   +V+ I+      Y  RG     +  +  A+ D S  + ++P+  + 
Sbjct: 393 IAIKDYKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKDYNGAVADYSQVIQMEPNCADT 452

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV------------LQCLAFYQKEIA 669
            + R       G+ + AI DYD A+ L+ D    +V             + +A +QK I+
Sbjct: 453 YFKRGCARSEKGDRQGAIADYDQAIKLDPDYAYAYVKRAYVRKEKGKKQEAIADFQKAIS 512

Query: 670 LYTASKINSEF 680
           L+    I  E 
Sbjct: 513 LFYQESILEEI 523



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 130/275 (47%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  L RG  ++    Y  AI+ + Q ++  P   +    RG       + ++AI+DFT++
Sbjct: 179 DAYLLRGCTRIEIDDYQGAIADYTQTIQLLPDDSDIYFMRGKGYIALDDYKSAIADFTQS 238

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP   EA+  RG   + +G   EAI D ++ ++ +P+  D    RG +    +D+  
Sbjct: 239 IKINPQYAEAYYLRGCIHSDIGNHQEAIADYTQTIQIDPSYVDAYRNRGHLLAAQEDYKE 298

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D S  ++LD  +   Y   G A  ++  YK A   + + I++D  + +A+       
Sbjct: 299 AISDYSESIRLDPSDADIYFRRGKAYIALENYKSAIGDYTQVIKIDSKYSDAYFIRGCLC 358

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L + + A+    +V+  +   + AY  RG     +  +K AI+D +  + I+P+ +  
Sbjct: 359 AELEDYQGAIADFTEVIKTNPNHADAYFQRGQARIAIKDYKGAIQDFTEVIKINPNEVAP 418

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
              R     AI +Y  A+ DY   + +E +  + +
Sbjct: 419 YLNRGDACTAIKDYNGAVADYSQVIQMEPNCADTY 453



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 83/176 (47%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T++ K  S   D    RG        Y  AI+ F +++K +P + +A   RG AR   ++
Sbjct: 338 TQVIKIDSKYSDAYFIRGCLCAELEDYQGAIADFTEVIKTNPNHADAYFQRGQARIAIKD 397

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI DFTE I+ NP+    +  RG A  A+ +   A+ D S+ ++ EPN AD   +RG
Sbjct: 398 YKGAIQDFTEVIKINPNEVAPYLNRGDACTAIKDYNGAVADYSQVIQMEPNCADTYFKRG 457

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
               +  D   A+ D    +KLD +   AY          G+ ++A     KAI L
Sbjct: 458 CARSEKGDRQGAIADYDQAIKLDPDYAYAYVKRAYVRKEKGKKQEAIADFQKAISL 513


>gi|411119879|ref|ZP_11392255.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410710035|gb|EKQ67546.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 467

 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 144/328 (43%), Gaps = 7/328 (2%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           +S+      +F L +GI   +   Y  AI  F++ L+  P + E    +G A    +  E
Sbjct: 1   MSRKPDSEAEFYLHQGIQLSHGCAYEDAIMSFERALQSSPTWHEPWYFKGMALCELQRYE 60

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            A+  F +AI       EA   RG A   LG    AI    KA++  P        RG  
Sbjct: 61  EAVQSFNQAIDLRADYPEALNSRGIALFNLGSYDSAIASYDKAIKLRPTFHQAWFNRGNA 120

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             K   + AA+E     ++++ +   ++   G+ LS +  Y  A  ++ KAI+   ++  
Sbjct: 121 LDKLGCYEAALESYDKSLEIEPDYSKSWYNRGITLSKLERYDDAIASYDKAIEFRPHYSN 180

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           AW +            +ALE  ++VL I   +  A++  G +LH LG+H++A+   +  L
Sbjct: 181 AWYNRANILHRQKRYSEALESYERVLSIKPDWHGAWYNLGNILHKLGRHEEAVASYNRAL 240

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYT 672
            I P      Y R +   A+G Y EAI+ Y  AL+++ +  E       A+Y     LY 
Sbjct: 241 KIVPKFYGAWYNRGNALDALGRYDEAIESYRRALEIKPNLRE-------AWYNWGSTLYK 293

Query: 673 ASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           AS+       +D    +DP F + W  R
Sbjct: 294 ASRYEEAIASYDQAIRLDPKFAKAWSSR 321



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 152/365 (41%), Gaps = 45/365 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRGIA  N G Y SAI+ +D+ +K  P + +A   RG A       EAA+  + ++++  
Sbjct: 82  SRGIALFNLGSYDSAIASYDKAIKLRPTFHQAWFNRGNALDKLGCYEAALESYDKSLEIE 141

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHER--------- 489
           P   ++W  RG   + L    +AI    KA+EF P       N A+ILH +         
Sbjct: 142 PDYSKSWYNRGITLSKLERYDDAIASYDKAIEFRPHYSNAWYNRANILHRQKRYSEALES 201

Query: 490 ------------------GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
                             G +  K      AV   +  +K+  +   A+   G AL ++G
Sbjct: 202 YERVLSIKPDWHGAWYNLGNILHKLGRHEEAVASYNRALKIVPKFYGAWYNRGNALDALG 261

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
            Y +A E++ +A+++  N  EAW +        +  E+A+    Q + +D +F+KA+  R
Sbjct: 262 RYDEAIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASYDQAIRLDPKFAKAWSSR 321

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G     LG + +AI      +   P   E  Y R      +G    A+  YD A+ +  D
Sbjct: 322 GTAFRKLGMYAEAIISYDKAVQHQPDLYEAWYGRGIALGHLGHNEAAVASYDHAVAINPD 381

Query: 652 SMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVY 711
                     A+Y + +AL      ++    +D    I+P F E   +R    N+     
Sbjct: 382 FYP-------AWYSRGVALGHLGDYDAAITSYDQALQINPNFPEAVSRR----NLALNYT 430

Query: 712 RQPPL 716
            QP L
Sbjct: 431 SQPEL 435



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 94/416 (22%), Positives = 162/416 (38%), Gaps = 59/416 (14%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           LC L+ + +A++  +  +    +  +  N R      L  +   I   DKA++L PT  Q
Sbjct: 53  LCELQRYEEAVQSFNQAIDLRADYPEALNSRGIALFNLGSYDSAIASYDKAIKLRPTFHQ 112

Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYD 164
           A+  +G A   LG  E AL  ++K               LE+E   + +  +R +T    
Sbjct: 113 AWFNRGNALDKLGCYEAALESYDKS--------------LEIEPDYSKSWYNRGIT---- 154

Query: 165 VSNSMSSLTVSESGLNANDKMSETSEN-----HNKSDICDSSSQSRDVSETCSKS-SHDP 218
               +S L   +  + + DK  E   +     +N+++I     +  +  E+  +  S  P
Sbjct: 155 ----LSKLERYDDAIASYDKAIEFRPHYSNAWYNRANILHRQKRYSEALESYERVLSIKP 210

Query: 219 D-------LCN-----GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDG----SK 262
           D       L N     GR +EA     V      L I  K      N   + D      +
Sbjct: 211 DWHGAWYNLGNILHKLGRHEEA-----VASYNRALKIVPKFYGAWYNRGNALDALGRYDE 265

Query: 263 STHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSN 322
           +  + R A EI     + +      + KAS  E      +    +  K +   +S   + 
Sbjct: 266 AIESYRRALEIKPNLREAWYNWGSTLYKASRYEEAIASYDQAIRLDPKFAKAWSSRGTAF 325

Query: 323 TNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD 382
                Y+++ IS +K   + + +  L   W            N+   V     + +I+ D
Sbjct: 326 RKLGMYAEAIISYDK---AVQHQPDLYEAWYGRGIALGHLGHNEA-AVASYDHAVAINPD 381

Query: 383 FR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--QRELEA 433
           F     SRG+A  + G Y +AI+ +DQ L+ +P +PEA+  R  A  +  Q EL A
Sbjct: 382 FYPAWYSRGVALGHLGDYDAAITSYDQALQINPNFPEAVSRRNLALNYTSQPELSA 437



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA  + G   +A++ +D  +  +P +  A   RG A     + +AAI+ + +A+Q NP
Sbjct: 355 RGIALGHLGHNEAAVASYDHAVAINPDFYPAWYSRGVALGHLGDYDAAITSYDQALQINP 414

Query: 447 SAGEAWKRRGQARAALGE---SVEAIQDLSKALEFEPNSADI 485
           +  EA  RR  A     +   S +   D    LE  P+S+DI
Sbjct: 415 NFPEAVSRRNLALNYTSQPELSADREDDPQNELELLPDSSDI 456


>gi|435850371|ref|YP_007311957.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
           DSM 15978]
 gi|433661001|gb|AGB48427.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
           DSM 15978]
          Length = 504

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 153/330 (46%), Gaps = 10/330 (3%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           FCV  I    S        +G     E KY+ +I  FD+ ++ +P   +A  G+G A + 
Sbjct: 18  FCVGCIGTDDSKEF---TKKGNELFEEEKYSESIEAFDKAIELNPQNADAWAGKGMALSE 74

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
             + E AI  + +AIQ  P+  + W  +G A   +G   EAIQ   KA+E +P      +
Sbjct: 75  TGKNEEAIQAYDKAIQLKPNNVKFWSEKGIALRKMGRYEEAIQAYDKAIELDPLDGFAWY 134

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +GI  F  K +  A++      +L+     A+   G  L     Y++A +A  KA  ++
Sbjct: 135 NKGIALFHIKKYEEAIQAYDEATELEPRFAMAWYNKGYVLYYTKRYEEAIQAFDKATGIN 194

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
           +   +AW +    Y +L  + +A+E L   + +D ++S A   +G LL+ + ++++AI+ 
Sbjct: 195 KKDAKAWNYKGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMRRYEEAIRV 254

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
               + I+P + +    +    + +G+  EAI+ +D A+ L+        L    +Y K 
Sbjct: 255 CDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLD-------PLDAEIWYYKG 307

Query: 668 IALYTASKINSEFCWFDIDGDIDPLFKEYW 697
            ALY   +        +   +I+P + E W
Sbjct: 308 TALYEMKEYEKALENLNKATEINPQYAEAW 337



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 146/289 (50%), Gaps = 7/289 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G++ +  G    A+   +  +  DP Y  AL  +G      R  E AI    +AI+  P
Sbjct: 204 KGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMRRYEEAIRVCDQAIEIEP 263

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  +G A   +G++ EAIQ   KA++ +P  A+I + +G   ++ K++  A+E+L
Sbjct: 264 QDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYKGTALYEMKEYEKALENL 323

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +   +++ +   A+   G A  +I EY+ A +A  K I+L+     AW       + +A 
Sbjct: 324 NKATEINPQYAEAWNDKGRAHYNINEYENAIQAFDKVIELEPQNDAAWDSKGNSLRRMAE 383

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++A++   + + ++ + S  +  +G  L+G+G+ ++A +     + ++P N +  Y + 
Sbjct: 384 YDEAIQAYDKAIELNPQNSWTWMHKGYTLYGMGKLEEAEQVFDKVIELNPENSDAWYSKG 443

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASK 675
           +    +G+  E+I+ YD A++L  D         +A+Y + IAL  A K
Sbjct: 444 NTLRRMGKIDESIQAYDKAIELNPDY-------AVAWYNRAIALDQAGK 485



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 136/263 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GIA  +  KY  AI  +D+  + +P +  A   +G    + +  E AI  F +A   N
Sbjct: 135 NKGIALFHIKKYEEAIQAYDEATELEPRFAMAWYNKGYVLYYTKRYEEAIQAFDKATGIN 194

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               +AW  +G +   LG + EA++ L+ A+  +P  +  L  +G +  + + +  A+  
Sbjct: 195 KKDAKAWNYKGVSYIELGMNYEAMEALNNAIGLDPQYSTALSNKGYLLNQMRRYEEAIRV 254

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++++ ++  A+ Y G AL+ +G+ ++A +A  KAIQLD    E W +      ++ 
Sbjct: 255 CDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYKGTALYEMK 314

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             EKALE L +   I+ ++++A++ +G   + + +++ AI+     + ++P N      +
Sbjct: 315 EYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAIQAFDKVIELEPQNDAAWDSK 374

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
            +    + EY EAI+ YD A++L
Sbjct: 375 GNSLRRMAEYDEAIQAYDKAIEL 397



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 125/253 (49%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI + DQ ++ +P   +A   +G A     + E AI  F +AIQ +P   E W  +
Sbjct: 247 RYEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYK 306

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   + E  +A+++L+KA E  P  A+  +++G  ++   ++  A++     ++L+ +
Sbjct: 307 GTALYEMKEYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAIQAFDKVIELEPQ 366

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           N +A+   G +L  + EY +A +A+ KAI+L+      W H       +   E+A +   
Sbjct: 367 NDAAWDSKGNSLRRMAEYDEAIQAYDKAIELNPQNSWTWMHKGYTLYGMGKLEEAEQVFD 426

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           +V+ ++   S A++ +G  L  +G+  ++I+     + ++P      Y RA      G+ 
Sbjct: 427 KVIELNPENSDAWYSKGNTLRRMGKIDESIQAYDKAIELNPDYAVAWYNRAIALDQAGKG 486

Query: 636 REAIKDYDAALDL 648
            EA   Y  A +L
Sbjct: 487 TEAAASYSRAKEL 499



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 107/218 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A    GK   AI  FD+ ++ DP+  E    +GTA    +E E A+ +  +A + NP
Sbjct: 272 KGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWYYKGTALYEMKEYEKALENLNKATEINP 331

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EAW  +G+A   + E   AIQ   K +E EP +      +G    +  +++ A++  
Sbjct: 332 QYAEAWNDKGRAHYNINEYENAIQAFDKVIELEPQNDAAWDSKGNSLRRMAEYDEAIQAY 391

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L+ +N   + + G  L  +G+ ++AE+   K I+L+    +AW       + +  
Sbjct: 392 DKAIELNPQNSWTWMHKGYTLYGMGKLEEAEQVFDKVIELNPENSDAWYSKGNTLRRMGK 451

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
            +++++   + + ++  ++ A++ R + L   G+  +A
Sbjct: 452 IDESIQAYDKAIELNPDYAVAWYNRAIALDQAGKGTEA 489



 Score = 46.2 bits (108), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 12/128 (9%)

Query: 72  ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY- 130
           + N+ +  +Q+  ++  IR CD+A++++P   +A+  KG A + +G+ EEA+  ++K   
Sbjct: 235 LSNKGYLLNQMRRYEEAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQ 294

Query: 131 ------EHALHQSADLKQFLELEELLTAAKQDRSVTCEY-----DVSNSMSSLTVSESGL 179
                 E   ++   L +  E E+ L    +   +  +Y     D   +  ++   E+ +
Sbjct: 295 LDPLDAEIWYYKGTALYEMKEYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAI 354

Query: 180 NANDKMSE 187
            A DK+ E
Sbjct: 355 QAFDKVIE 362



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 50/107 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+G +     +Y  AI  +D+ ++ +P      + +G       +LE A   F + I+ N
Sbjct: 373 SKGNSLRRMAEYDEAIQAYDKAIELNPQNSWTWMHKGYTLYGMGKLEEAEQVFDKVIELN 432

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           P   +AW  +G     +G+  E+IQ   KA+E  P+ A   + R I 
Sbjct: 433 PENSDAWYSKGNTLRRMGKIDESIQAYDKAIELNPDYAVAWYNRAIA 479



 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 43/94 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + +G      GK   A  +FD++++ +P   +A   +G       +++ +I  + +AI+ 
Sbjct: 406 MHKGYTLYGMGKLEEAEQVFDKVIELNPENSDAWYSKGNTLRRMGKIDESIQAYDKAIEL 465

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
           NP    AW  R  A    G+  EA    S+A E 
Sbjct: 466 NPDYAVAWYNRAIALDQAGKGTEAAASYSRAKEL 499


>gi|384210358|ref|YP_005596078.1| hypothetical protein Bint_2904 [Brachyspira intermedia PWS/A]
 gi|343388008|gb|AEM23498.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 596

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 119/219 (54%), Gaps = 7/219 (3%)

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+  RG A+  L +  EAI+D  KA+E  PNS+   + RG   +  + +  A++D    +
Sbjct: 330 AYNNRGNAKYNLEQYKEAIKDFDKAIELNPNSSKTYYNRGNTKYSLEQYKEAIKDFDKSI 389

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           +LD  N+  Y   G+  + +  YK+A E   K+I+LD N  EA+ +      DL  +EKA
Sbjct: 390 ELDPNNQDTYNNRGIVKADLNYYKEAIEDFNKSIELDPNCSEAYNNRGTTKLDLGFNEKA 449

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           ++   + + ++   S AY+ RG   + LG +KKA KD +  + ++P+N      R +  +
Sbjct: 450 IKDFNKAIELNPNNSSAYNNRGNAKNKLGLYKKATKDFNKAIKLNPNNGNAYNNRGNAKN 509

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
            + +Y+EAIKD++ A++L  +       Q +A+Y K I+
Sbjct: 510 YLKKYKEAIKDFNKAIELNYN-------QFIAYYNKGIS 541



 Score = 41.2 bits (95), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 3/125 (2%)

Query: 8   DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSY 67
           +++Y L +  + I + D+ + ++   +     R       SL  + +AI+  D  +    
Sbjct: 336 NAKYNLEQYKEAIKDFDKAIELNPNSSKTYYNRGNTK--YSLEQYKEAIKDFDKSIELDP 393

Query: 68  EIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
             QD  N R    + L  +K  I D +K+++LDP   +AY  +G     LG  E+A+  +
Sbjct: 394 NNQDTYNNRGIVKADLNYYKEAIEDFNKSIELDPNCSEAYNNRGTTKLDLGFNEKAIKDF 453

Query: 127 EKGYE 131
            K  E
Sbjct: 454 NKAIE 458


>gi|434402232|ref|YP_007145117.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
 gi|428256487|gb|AFZ22437.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
          Length = 537

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 145/296 (48%), Gaps = 8/296 (2%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI+ +++ L+ +P + EA   RG   +  ++ E AI+DF  A++ NP   +A+  RG
Sbjct: 161 YPGAIADYNRSLEINPNFGEAYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERG 220

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
              +ALG+  +AI D ++AL+  P  A +   R     +  D+  A+ D +  ++L+   
Sbjct: 221 LVYSALGDDQKAIADYNQALQENPTLALVYGFRANARHRLGDYQGAIADSNRLLQLNPNL 280

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
              Y     A  ++G+Y+ A + + +A+Q++ N   A+       + L + + A+E    
Sbjct: 281 AEGYCDRAAARRALGDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDFQGAIEDNTL 340

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            + I   F+ AY  RG     LG  + AI D S  L I+P  IE  Y R S  +A+ EY 
Sbjct: 341 AIEIAPEFAPAYCNRGNARRLLGDEQGAIADYSQALQINPDLIEAYYNRGSTRYALEEYE 400

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAFYQKE-----IALYTASKINSEFC---WFD 684
            AI D+  AL +  DS   +  +  A+Y  E     IA Y  + +  + C   WF+
Sbjct: 401 GAIADFTQALQINPDSAPFYSDRANAYYALEDYPAAIADYNQAIVLDQSCAEDWFN 456



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 143/284 (50%), Gaps = 3/284 (1%)

Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +   ++S  I+ +F     SRG+   +  KY  AI+ F+  LK +P   +A   RG   
Sbjct: 164 AIADYNRSLEINPNFGEAYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVY 223

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           +   + + AI+D+ +A+Q NP+    +  R  AR  LG+   AI D ++ L+  PN A+ 
Sbjct: 224 SALGDDQKAIADYNQALQENPTLALVYGFRANARHRLGDYQGAIADSNRLLQLNPNLAEG 283

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
             +R        D+  A++D +  ++++     AY   G+A  ++ +++ A E +  AI+
Sbjct: 284 YCDRAAARRALGDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDFQGAIEDNTLAIE 343

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +   F  A+ +     + L + + A+    Q L I+    +AY+ RG   + L +++ AI
Sbjct: 344 IAPEFAPAYCNRGNARRLLGDEQGAIADYSQALQINPDLIEAYYNRGSTRYALEEYEGAI 403

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            D +  L I+P +      RA+ Y+A+ +Y  AI DY+ A+ L+
Sbjct: 404 ADFTQALQINPDSAPFYSDRANAYYALEDYPAAIADYNQAIVLD 447



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 6/240 (2%)

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
           M  E LI +G  +  Q +   AI+ + EA++ NP    A+  RGQA  AL E  EAI + 
Sbjct: 1   MNAEDLINQGLNKDLQGDYLGAIALYNEALRLNPCLALAFYHRGQAYFALSEYSEAIANY 60

Query: 473 SKALEFEPNS------ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
            +A+E +         A   H RG+  F   D   A+ D  + ++      +AY+  G  
Sbjct: 61  RQAIEHKLTQNINFDIAKAYHSRGLGRFDRGDHQGAIADFDSSLEWYPNFVAAYSNRGNI 120

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
              +G+Y  A   + +AI+L+ NF  A+ +       L +   A+    + L I+  F +
Sbjct: 121 FYILGKYSDAIADYDQAIRLNPNFAPAYHNRGNTRYALEDYPGAIADYNRSLEINPNFGE 180

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RGL    L +++KAI D ++ L ++P +++  Y R   Y A+G+ ++AI DY+ AL
Sbjct: 181 AYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVYSALGDDQKAIADYNQAL 240



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 137/315 (43%), Gaps = 41/315 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+ + + G +  AI+ FD  L+  P +  A   RG       +   AI+D+ +AI+ N
Sbjct: 82  SRGLGRFDRGDHQGAIADFDSSLEWYPNFVAAYSNRGNIFYILGKYSDAIADYDQAIRLN 141

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG  R AL +   AI D +++LE  PN  +  + RG+     K +  A+ D
Sbjct: 142 PNFAPAYHNRGNTRYALEDYPGAIADYNRSLEINPNFGEAYYSRGLFFSHLKKYEKAIAD 201

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +A +KL+ ++  AY   GL  S++G+                                 
Sbjct: 202 FNAALKLNPDDVQAYYERGLVYSALGD--------------------------------- 228

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             +KA+    Q L  +   +  Y  R    H LG ++ AI D +  L ++P+  E    R
Sbjct: 229 -DQKAIADYNQALQENPTLALVYGFRANARHRLGDYQGAIADSNRLLQLNPNLAEGYCDR 287

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
           A+   A+G+Y+ AI+DY+ AL + ++          A+Y + IA               +
Sbjct: 288 AAARRALGDYQGAIQDYNRALQINVNL-------AFAYYGRGIAREALKDFQGAIEDNTL 340

Query: 686 DGDIDPLFKEYWCKR 700
             +I P F   +C R
Sbjct: 341 AIEIAPEFAPAYCNR 355



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 127/274 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+     G    AI+ ++Q L+E+P        R  AR    + + AI+D    +Q NP
Sbjct: 219 RGLVYSALGDDQKAIADYNQALQENPTLALVYGFRANARHRLGDYQGAIADSNRLLQLNP 278

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  E +  R  AR ALG+   AIQD ++AL+   N A   + RGI     KDF  A+ED 
Sbjct: 279 NLAEGYCDRAAARRALGDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDFQGAIEDN 338

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +++  E   AY   G A   +G+ + A   + +A+Q++ + +EA+ +       L  
Sbjct: 339 TLAIEIAPEFAPAYCNRGNARRLLGDEQGAIADYSQALQINPDLIEAYYNRGSTRYALEE 398

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A+    Q L I+   +  Y  R    + L  +  AI D +  + +D S  E  + R 
Sbjct: 399 YEGAIADFTQALQINPDSAPFYSDRANAYYALEDYPAAIADYNQAIVLDQSCAEDWFNRG 458

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
                +G    A+ D + AL L+ D    ++L+ 
Sbjct: 459 RSRSLLGNLEGALTDLNQALQLQPDWATAYILRA 492



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 110/222 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R  A+   G Y  AI  +++ L+ +     A  GRG AR   ++ + AI D T AI+  P
Sbjct: 287 RAAARRALGDYQGAIQDYNRALQINVNLAFAYYGRGIAREALKDFQGAIEDNTLAIEIAP 346

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG AR  LG+   AI D S+AL+  P+  +  + RG   +  +++  A+ D 
Sbjct: 347 EFAPAYCNRGNARRLLGDEQGAIADYSQALQINPDLIEAYYNRGSTRYALEEYEGAIADF 406

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++++ ++   Y+    A  ++ +Y  A   + +AI LD++  E W +  +    L N
Sbjct: 407 TQALQINPDSAPFYSDRANAYYALEDYPAAIADYNQAIVLDQSCAEDWFNRGRSRSLLGN 466

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            E AL  L Q L +   ++ AY LR  +   LGQ + AI D 
Sbjct: 467 LEGALTDLNQALQLQPDWATAYILRADVHRNLGQEENAIADF 508



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 118/261 (45%), Gaps = 14/261 (5%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI+  +++L+ +P   E    R  AR    + + AI D+  A+Q N +   A+  
Sbjct: 261 GDYQGAIADSNRLLQLNPNLAEGYCDRAAARRALGDYQGAIQDYNRALQINVNLAFAYYG 320

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG AR AL +   AI+D + A+E  P  A     RG       D   A+ D S  ++++ 
Sbjct: 321 RGIAREALKDFQGAIEDNTLAIEIAPEFAPAYCNRGNARRLLGDEQGAIADYSQALQINP 380

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE-- 572
           +   AY   G    ++ EY+ A     +A+Q++ +          FY D AN+  ALE  
Sbjct: 381 DLIEAYYNRGSTRYALEEYEGAIADFTQALQINPD-------SAPFYSDRANAYYALEDY 433

Query: 573 -----CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
                   Q + +D+  ++ +  RG     LG  + A+ DL+  L + P       LRA 
Sbjct: 434 PAAIADYNQAIVLDQSCAEDWFNRGRSRSLLGNLEGALTDLNQALQLQPDWATAYILRAD 493

Query: 628 CYHAIGEYREAIKDYDAALDL 648
            +  +G+   AI D+  A +L
Sbjct: 494 VHRNLGQEENAIADFQQAAEL 514



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 124/267 (46%), Gaps = 24/267 (8%)

Query: 297 HGRQTNGTHDVHDKLSS--DSASLNDSNTN-SESY-----SKSSISDNKSSDSTESRS-- 346
           +G + N  H + D   +  DS  L   N N +E Y     ++ ++ D + +    +R+  
Sbjct: 250 YGFRANARHRLGDYQGAIADSNRLLQLNPNLAEGYCDRAAARRALGDYQGAIQDYNRALQ 309

Query: 347 ---KLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASA 400
               L+F +   +  + EA ++ +  +   + +  I+ +F     +RG A+   G    A
Sbjct: 310 INVNLAFAY-YGRGIAREALKDFQGAIEDNTLAIEIAPEFAPAYCNRGNARRLLGDEQGA 368

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I+ + Q L+ +P   EA   RG+ R    E E AI+DFT+A+Q NP +   +  R  A  
Sbjct: 369 IADYSQALQINPDLIEAYYNRGSTRYALEEYEGAIADFTQALQINPDSAPFYSDRANAYY 428

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
           AL +   AI D ++A+  + + A+    RG       +   A+ DL+  ++L  +  +AY
Sbjct: 429 ALEDYPAAIADYNQAIVLDQSCAEDWFNRGRSRSLLGNLEGALTDLNQALQLQPDWATAY 488

Query: 521 TY-------LGLALSSIGEYKKAEEAH 540
                    LG   ++I ++++A E +
Sbjct: 489 ILRADVHRNLGQEENAIADFQQAAELY 515



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 88/455 (19%), Positives = 174/455 (38%), Gaps = 62/455 (13%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++ ++ +AIR L+   A +Y      NR      LE +   I D +++L+++P   +AY 
Sbjct: 130 AIADYDQAIR-LNPNFAPAYH-----NRGNTRYALEDYPGAIADYNRSLEINPNFGEAYY 183

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
            +G  FS L + E+A++ +    +       D++ + E   + +A   D+    +Y+ + 
Sbjct: 184 SRGLFFSHLKKYEKAIADFNAALKL---NPDDVQAYYERGLVYSALGDDQKAIADYNQAL 240

Query: 168 SMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDE 227
             +       G  AN +       H   D   + + S  + +       +P+L  G  D 
Sbjct: 241 QENPTLALVYGFRANAR-------HRLGDYQGAIADSNRLLQL------NPNLAEGYCDR 287

Query: 228 AKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGP 287
           A    ++   +  +    +  +++ N   +  G            I R++  DF      
Sbjct: 288 AAARRALGDYQGAIQDYNRALQINVNLAFAYYGRG----------IAREALKDF------ 331

Query: 288 IDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSK 347
                     G   + T  +        A  N  N      ++  + D + + +  S++ 
Sbjct: 332 ---------QGAIEDNTLAIEIAPEFAPAYCNRGN------ARRLLGDEQGAIADYSQA- 375

Query: 348 LSFKWDMLKETSNE-----AKRNKKFCVTRISKSKSISVD---FRLSRGIAQVNEGKYAS 399
           L    D+++   N      A    +  +   +++  I+ D   F   R  A      Y +
Sbjct: 376 LQINPDLIEAYYNRGSTRYALEEYEGAIADFTQALQINPDSAPFYSDRANAYYALEDYPA 435

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI+ ++Q +  D    E    RG +R+    LE A++D  +A+Q  P    A+  R    
Sbjct: 436 AIADYNQAIVLDQSCAEDWFNRGRSRSLLGNLEGALTDLNQALQLQPDWATAYILRADVH 495

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
             LG+   AI D  +A E      +  + R I+N 
Sbjct: 496 RNLGQEENAIADFQQAAELYHQQGNTQYYRQILNL 530



 Score = 43.1 bits (100), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 11/123 (8%)

Query: 11  YRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEI- 69
           Y L K    I + D+ +R++   A A   R       +L ++  AI   +    +S EI 
Sbjct: 122 YILGKYSDAIADYDQAIRLNPNFAPAYHNRGN--TRYALEDYPGAIADYN----RSLEIN 175

Query: 70  ----QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
               +   +R   +S L+ ++  I D + AL+L+P  +QAY  +G  +SALG  ++A++ 
Sbjct: 176 PNFGEAYYSRGLFFSHLKKYEKAIADFNAALKLNPDDVQAYYERGLVYSALGDDQKAIAD 235

Query: 126 WEK 128
           + +
Sbjct: 236 YNQ 238


>gi|445062671|ref|ZP_21375019.1| hypothetical protein H263_04638, partial [Brachyspira hampsonii
           30599]
 gi|444505943|gb|ELV06357.1| hypothetical protein H263_04638, partial [Brachyspira hampsonii
           30599]
          Length = 324

 Score =  112 bits (280), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 75/307 (24%), Positives = 149/307 (48%), Gaps = 10/307 (3%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAF---QRELEAAISDFTEAIQSNPSAGEAWK 453
           Y  AI  F +++K D    EA   R  A+A    +   ++A+ D+T A++ N     A+ 
Sbjct: 22  YNLAIEYFSEVIKLDSTIYEAYYNRANAKANIDNENSYKSAVEDYTWALKLNDKFAAAYY 81

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG    +LG +  A++D  KA+E   N  +  + R       KD+  ++ED +  +++ 
Sbjct: 82  NRGIINRSLGNTENALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVY 141

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
                AY    L+ +++GEYK+A + + KAI+ + +F++A+ +     + L N  +A++ 
Sbjct: 142 PHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNYNEAIDD 201

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
               ++I++ F+  Y  R      +  +K A++D    + I P+ ++    R      + 
Sbjct: 202 YTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIAPNYLKAYLNRGIIAMTME 261

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLF 693
            Y+EAIKD+D  ++L+ +  +       A+Y K +AL      +    ++D    ++P +
Sbjct: 262 AYQEAIKDFDKVIELDPNIAD-------AYYNKAVALNHLGIYDEAILYYDQAIKLNPDY 314

Query: 694 KEYWCKR 700
            E +  R
Sbjct: 315 SESYFNR 321



 Score =  106 bits (264), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 128/264 (48%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           NE  Y SA+  +   LK +  +  A   RG         E A+ DF +AI+ N +  EA+
Sbjct: 55  NENSYKSAVEDYTWALKLNDKFAAAYYNRGIINRSLGNTENALKDFDKAIELNYNLEEAY 114

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             R   +A+L +   +I+D +KA+E  P+ AD  + R +      ++  A++D    ++ 
Sbjct: 115 YVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEY 174

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           +     AY   G     +G Y +A + +  AI ++R F + + +       + + + A+E
Sbjct: 175 NSHFIDAYNNRGNVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVE 234

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              +++ I   + KAY  RG++   +  +++AIKD    + +DP+  +  Y +A   + +
Sbjct: 235 DFDELIKIAPNYLKAYLNRGIIAMTMEAYQEAIKDFDKVIELDPNIADAYYNKAVALNHL 294

Query: 633 GEYREAIKDYDAALDLELDSMEKF 656
           G Y EAI  YD A+ L  D  E +
Sbjct: 295 GIYDEAILYYDQAIKLNPDYSESY 318



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 9/196 (4%)

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI---GEYKKAEEAHLKAIQLDRNF 550
           FK K++N A+E  S  +KLD     AY     A ++I     YK A E +  A++L+  F
Sbjct: 17  FKNKNYNLAIEYFSEVIKLDSTIYEAYYNRANAKANIDNENSYKSAVEDYTWALKLNDKF 76

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +     + L N+E AL+   + + ++    +AY++R      L  +K +I+D + 
Sbjct: 77  AAAYYNRGIINRSLGNTENALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNK 136

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQ 665
            + + P   +  Y RA   +A+GEY+EAIKDYD A++     ++ +     V + L  Y 
Sbjct: 137 AIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNYN 196

Query: 666 KEIALYT-ASKINSEF 680
           + I  YT A  IN EF
Sbjct: 197 EAIDDYTNAIHINREF 212



 Score = 39.7 bits (91), Expect = 10.0,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 49  LRNWSKAIRILDSLL--AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
           ++++  A+   D L+  A +Y ++   NR      +E ++  I+D DK ++LDP +  AY
Sbjct: 226 IKDYKGAVEDFDELIKIAPNY-LKAYLNRGIIAMTMEAYQEAIKDFDKVIELDPNIADAY 284

Query: 107 ILKGCAFSALGRKEEALSVWEKG 129
             K  A + LG  +EA+  +++ 
Sbjct: 285 YNKAVALNHLGIYDEAILYYDQA 307


>gi|374299783|ref|YP_005051422.1| hypothetical protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332552719|gb|EGJ49763.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 395

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 120/229 (52%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG A A+ RE   +I DF  +I  NP +   +  RG +   +GES +AI D +KA+  +P
Sbjct: 65  RGLAYAYAREYYKSIVDFDMSIIINPYSSLVYSDRGNSYFEIGESEQAIADWNKAILLDP 124

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            +       G  ++  K++  A+E  +  +K + +   AY   GLA  ++GEY KA   +
Sbjct: 125 GNPHPYVSMGYDHYLKKEYVQAIEFFNTAIKYNPKYALAYNNRGLAYHALGEYIKAIADY 184

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI +D     A+ +    Y  +   ++AL    + + I+ R  + Y+ RGL    +GQ
Sbjct: 185 NEAILIDPMLAWAYNNRGGTYSKIEKYQQALSDYNKAIKINPRLGRTYNNRGLTHARMGQ 244

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           H++A+ D S  + ++  N E  Y R   Y+ +G +++AI+DY  A+ ++
Sbjct: 245 HQQALTDFSKAVELESDNSEVYYNRGLTYNILGNHQKAIQDYIMAIRID 293



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 101/203 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG +    G+   AI+ +++ +  DP  P   +  G     ++E   AI  F  AI+ NP
Sbjct: 99  RGNSYFEIGESEQAIADWNKAILLDPGNPHPYVSMGYDHYLKKEYVQAIEFFNTAIKYNP 158

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG A  ALGE ++AI D ++A+  +P  A   + RG    K + +  A+ D 
Sbjct: 159 KYALAYNNRGLAYHALGEYIKAIADYNEAILIDPMLAWAYNNRGGTYSKIEKYQQALSDY 218

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +K++      Y   GL  + +G++++A     KA++L+ +  E + +    Y  L N
Sbjct: 219 NKAIKINPRLGRTYNNRGLTHARMGQHQQALTDFSKAVELESDNSEVYYNRGLTYNILGN 278

Query: 567 SEKALECLQQVLYIDKRFSKAYH 589
            +KA++     + ID + SKA++
Sbjct: 279 HQKAIQDYIMAIRIDPKLSKAHN 301



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 5/192 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +S G     + +Y  AI  F+  +K +P Y  A   RG A     E   AI+D+ EAI  
Sbjct: 131 VSMGYDHYLKKEYVQAIEFFNTAIKYNPKYALAYNNRGLAYHALGEYIKAIADYNEAILI 190

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+  RG   + + +  +A+ D +KA++  P      + RG+ + +      A+ 
Sbjct: 191 DPMLAWAYNNRGGTYSKIEKYQQALSDYNKAIKINPRLGRTYNNRGLTHARMGQHQQALT 250

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY--- 561
           D S  V+L+ +N   Y   GL  + +G ++KA + ++ AI++D    +A  +L   Y   
Sbjct: 251 DFSKAVELESDNSEVYYNRGLTYNILGNHQKAIQDYIMAIRIDPKLSKAHNNLAFTYATA 310

Query: 562 --QDLANSEKAL 571
               L N E+AL
Sbjct: 311 NPPQLRNMEEAL 322



 Score = 43.5 bits (101), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 52/84 (61%), Gaps = 6/84 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++ ++++AI ++D +LA +Y      NR   YS++E ++  + D +KA++++P L + Y 
Sbjct: 180 AIADYNEAI-LIDPMLAWAYN-----NRGGTYSKIEKYQQALSDYNKAIKINPRLGRTYN 233

Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
            +G   + +G+ ++AL+ + K  E
Sbjct: 234 NRGLTHARMGQHQQALTDFSKAVE 257


>gi|428312973|ref|YP_007123950.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
 gi|428254585|gb|AFZ20544.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
          Length = 738

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 151/343 (44%), Gaps = 18/343 (5%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A++ +++ ++  P Y  A  G+G      +  E A + + +AIQ  P   EAW  R
Sbjct: 382 RYDDALASYNRAVELKPEYAAAWNGKGNTLLALKRYEEARNAYDKAIQIQPDYAEAWIGR 441

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A  +L +  EAI    +ALEF+ +S +  + +G V  K + ++ A+      ++L   
Sbjct: 442 GNALDSLQQYKEAINSFDRALEFKSDSLEAWNNKGNVQIKLQKYSDAIASFDKAIELQPN 501

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
               + + G AL ++ +Y++A +++ KA++   +F  AW        +L   ++A+E   
Sbjct: 502 YAPTWNHRGWALHNLRQYEEAVKSYNKAVEYQPDFPNAWYQRGNALINLQKYQEAVESYD 561

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + +     F KA++ RG  L  L Q+++A       +  +P + E  Y R    H +  Y
Sbjct: 562 KAVQFQPNFYKAWYSRGSALLNLRQYEQAFASFDQAVKFNPDDSEAWYNRGWSLHQLQRY 621

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL----YTASKINSEFCWFDIDGDIDP 691
           +EA+  Y+ A+ L              FYQ +  L    Y   +    F  ++   +I P
Sbjct: 622 QEAVASYNKAIQLRKK-----------FYQAQYNLGNVFYKLKRYQDAFVSYNKVLEIQP 670

Query: 692 LFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTK 734
              E W  R    N    + R     DS  K    + D+   K
Sbjct: 671 NHYEAWYSR---GNALVNLKRYQDAIDSYNKALQYKPDYQAAK 710



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 117/245 (47%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R  + KS S++   ++G  Q+   KY+ AI+ FD+ ++  P Y      RG A    R+ 
Sbjct: 460 RALEFKSDSLEAWNNKGNVQIKLQKYSDAIASFDKAIELQPNYAPTWNHRGWALHNLRQY 519

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E A+  + +A++  P    AW +RG A   L +  EA++   KA++F+PN     + RG 
Sbjct: 520 EEAVKSYNKAVEYQPDFPNAWYQRGNALINLQKYQEAVESYDKAVQFQPNFYKAWYSRGS 579

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                + +  A       VK + ++  A+   G +L  +  Y++A  ++ KAIQL + F 
Sbjct: 580 ALLNLRQYEQAFASFDQAVKFNPDDSEAWYNRGWSLHQLQRYQEAVASYNKAIQLRKKFY 639

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +A  +L   +  L   + A     +VL I     +A++ RG  L  L +++ AI   +  
Sbjct: 640 QAQYNLGNVFYKLKRYQDAFVSYNKVLEIQPNHYEAWYSRGNALVNLKRYQDAIDSYNKA 699

Query: 612 LGIDP 616
           L   P
Sbjct: 700 LQYKP 704



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 34/167 (20%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A +N  KY  A+  +D+ ++  P + +A   RG+A    R+ E A + F +A++ NP
Sbjct: 543 RGNALINLQKYQEAVESYDKAVQFQPNFYKAWYSRGSALLNLRQYEQAFASFDQAVKFNP 602

Query: 447 SAGEAWKRRG---------------------------QARAALGESV-------EAIQDL 472
              EAW  RG                           QA+  LG          +A    
Sbjct: 603 DDSEAWYNRGWSLHQLQRYQEAVASYNKAIQLRKKFYQAQYNLGNVFYKLKRYQDAFVSY 662

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
           +K LE +PN  +  + RG      K +  A++  +  ++   + ++A
Sbjct: 663 NKVLEIQPNHYEAWYSRGNALVNLKRYQDAIDSYNKALQYKPDYQAA 709


>gi|428317099|ref|YP_007114981.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
           7112]
 gi|428240779|gb|AFZ06565.1| serine/threonine protein kinase [Oscillatoria nigro-viridis PCC
           7112]
          Length = 804

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 160/341 (46%), Gaps = 12/341 (3%)

Query: 327 SYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS 386
           ++ KS      SSDS  SR  L  ++ +L      A     F  +  S+   I       
Sbjct: 362 AHKKSIAPSLMSSDSFYSR--LGSRFWLLILAGVGAAIVLIFLFSYWSRPNPIKAKEYYE 419

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+ +      A+A+  F++ ++ +P   E+   RG A    ++ + AI+D+++AI  NP
Sbjct: 420 KGVEKSRNQDAAAALQAFNKSIQLNPKNAESFYWRGNANYDLKKYQEAIADYSQAIALNP 479

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG AR    +   AI+D ++AL  +PN AD  +ERG+   + +D+  A++D 
Sbjct: 480 KYVQAYFNRGLARHDFNDKRGAIEDYTQALNLQPNDADTYYERGVTYLELQDYKTAIQDF 539

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +A ++L      AY   GLA +  G+ +     + +AI+LD   ++A+    +    L +
Sbjct: 540 NAVIRLQPNLVKAYHSRGLARAGSGDLQGGIGDYTEAIKLDAKNVDAFYSRGRARFHLGD 599

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID-----PSNIEC 621
            + AL    QV+ ID + + AY  R      LG H+ AI D +  + +      P N  C
Sbjct: 600 YQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDDCTQAISLSDEDGVPYNNRC 659

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           +      Y  + +Y +AI D   AL +  +    +  + LA
Sbjct: 660 I-----AYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALA 695



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 149/336 (44%), Gaps = 11/336 (3%)

Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKED 411
           E   E  RN+       + +KSI ++ + +     RG A  +  KY  AI+ + Q +  +
Sbjct: 419 EKGVEKSRNQDAAAALQAFNKSIQLNPKNAESFYWRGNANYDLKKYQEAIADYSQAIALN 478

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P Y +A   RG AR    +   AI D+T+A+   P+  + +  RG     L +   AIQD
Sbjct: 479 PKYVQAYFNRGLARHDFNDKRGAIEDYTQALNLQPNDADTYYERGVTYLELQDYKTAIQD 538

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            +  +  +PN     H RG+      D    + D +  +KLD +N  A+   G A   +G
Sbjct: 539 FNAVIRLQPNLVKAYHSRGLARAGSGDLQGGIGDYTEAIKLDAKNVDAFYSRGRARFHLG 598

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           +Y+ A   + + I +D    +A+ +      +L   + A++   Q + +       Y+ R
Sbjct: 599 DYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDDCTQAISLSDEDGVPYNNR 658

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            +    L  + KAI D +  L ++P++      RA    A G+ + AI D+ AA+    +
Sbjct: 659 CIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALARSAGGDAQGAIADFTAAIGFNPN 718

Query: 652 SMEKF-----VLQCLAFYQKEIALYT-ASKINSEFC 681
           + E +     + Q L  Y   IA Y  A +I+  + 
Sbjct: 719 NAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYA 754



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 116/261 (44%), Gaps = 34/261 (13%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D    RG+  +    Y +AI  F+ +++  P   +A   RG ARA   +L+  I D+TEA
Sbjct: 517 DTYYERGVTYLELQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSGDLQGGIGDYTEA 576

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL--------------- 486
           I+ +    +A+  RG+AR  LG+   A+ D S+ +  +P SAD                 
Sbjct: 577 IKLDAKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQA 636

Query: 487 -------------------HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
                              + R I     KD+  A+ D +  +K++  + +AY    LA 
Sbjct: 637 AIDDCTQAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALAR 696

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
           S+ G+ + A      AI  + N  EA+ +  + YQ+L N   A+    Q + I   ++ A
Sbjct: 697 SAGGDAQGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAA 756

Query: 588 YHLRGLLLHGLGQHKKAIKDL 608
           Y+ RGL+   LG    AI DL
Sbjct: 757 YYGRGLVRRSLGDKAGAISDL 777



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 2/211 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +VD   SRG A+ + G Y  A++ + Q++  DP   +A   R + +      +AAI D T
Sbjct: 583 NVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDDCT 642

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI  +   G  +  R  A   L +  +AI D ++AL+  PN  +  + R +      D 
Sbjct: 643 QAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALARSAGGDA 702

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ D +A +  +  N  AY         +  Y  A   +++AI++  N+  A+     
Sbjct: 703 QGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAAYYGRGL 762

Query: 560 FYQDLANSEKALECLQQV--LYIDKRFSKAY 588
             + L +   A+  L++   +Y+D+  +  Y
Sbjct: 763 VRRSLGDKAGAISDLEKAGKMYLDQGLTGGY 793


>gi|126178012|ref|YP_001045977.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
 gi|125860806|gb|ABN55995.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
          Length = 562

 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 7/311 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G    AI  +D+++  +P   +A + RGTA A +R  EAAI  +   +   P
Sbjct: 116 RGHALRKIGLSPEAIECYDRVVALEPNRIDAWLARGTALAAERRYEAAIECYDRVVALEP 175

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  RG     L    +AI    +A+  +PN A+  + RG      K ++ A+   
Sbjct: 176 KNANAWYARGTIETLLSRYEDAIASYGQAVAIDPNHAETWYNRGCALSALKRYDEAIGCF 235

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + L  ++   +   G AL ++  Y++A + + +A +++ ++   W H     + L  
Sbjct: 236 DRAIALRPDDAETWYNRGRALQNLERYEEALDCYERAFRINPDYPGIWNHKATVLKKLKR 295

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + +L C  + L ++   ++ +H +GLL   L ++  AI+ LS  L + P + +  Y R 
Sbjct: 296 YDLSLACFDRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYYRG 355

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
             Y+A+G    AI  Y A + L  ++        +A+     ALY           ++  
Sbjct: 356 ESYYALGNCEAAIDCYRAVVRLNPENA-------VAWNNCGNALYHLKHYEEALVCYERA 408

Query: 687 GDIDPLFKEYW 697
            +IDP  +  W
Sbjct: 409 LEIDPENRRVW 419



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 135/308 (43%), Gaps = 5/308 (1%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R+   +   +D  L+RG A   E +Y +AI  +D+++  +P    A   RGT     
Sbjct: 132 CYDRVVALEPNRIDAWLARGTALAAERRYEAAIECYDRVVALEPKNANAWYARGTIETLL 191

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              E AI+ + +A+  +P+  E W  RG A +AL    EAI    +A+   P+ A+  + 
Sbjct: 192 SRYEDAIASYGQAVAIDPNHAETWYNRGCALSALKRYDEAIGCFDRAIALRPDDAETWYN 251

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG      + +  A++      +++ +    + +    L  +  Y  +     +A++++ 
Sbjct: 252 RGRALQNLERYEEALDCYERAFRINPDYPGIWNHKATVLKKLKRYDLSLACFDRALRVNA 311

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              E W      Y  L     A+ECL Q L +    + A + RG   + LG  + AI   
Sbjct: 312 VDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYYRGESYYALGNCEAAIDCY 371

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAF 663
            + + ++P N        +  + +  Y EA+  Y+ AL+++ ++   +     VL  L+ 
Sbjct: 372 RAVVRLNPENAVAWNNCGNALYHLKHYEEALVCYERALEIDPENRRVWNNKASVLSVLSH 431

Query: 664 YQKEIALY 671
           Y K +  Y
Sbjct: 432 YDKALVCY 439



 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 40/307 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           SV+    +G A   +G+Y  A+  +DQ ++++    +A   +G A A  R    A+  F 
Sbjct: 7   SVEAWCKKGRAYAEQGQYDRAVECYDQAIRQNTGAGDAWYHKGLALAAARRHREALECFD 66

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           + ++ +P+ G  W  RGQ    LGE  EAI    +A++  P+SA+               
Sbjct: 67  QVVRIDPTCGRFWLARGQTLYDLGECREAIGSCGQAVKLAPDSAN--------------- 111

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
                              A+   G AL  IG   +A E + + + L+ N ++AW     
Sbjct: 112 -------------------AWFIRGHALRKIGLSPEAIECYDRVVALEPNRIDAWLARGT 152

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
                   E A+EC  +V+ ++ + + A++ RG +   L +++ AI      + IDP++ 
Sbjct: 153 ALAAERRYEAAIECYDRVVALEPKNANAWYARGTIETLLSRYEDAIASYGQAVAIDPNHA 212

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-A 673
           E  Y R     A+  Y EAI  +D A+ L  D  E +      LQ L  Y++ +  Y  A
Sbjct: 213 ETWYNRGCALSALKRYDEAIGCFDRAIALRPDDAETWYNRGRALQNLERYEEALDCYERA 272

Query: 674 SKINSEF 680
            +IN ++
Sbjct: 273 FRINPDY 279



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 132/288 (45%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R    +    +   +RG A  N  +Y  A+  +++  + +P YP     + T     
Sbjct: 234 CFDRAIALRPDDAETWYNRGRALQNLERYEEALDCYERAFRINPDYPGIWNHKATVLKKL 293

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +  + +++ F  A++ N    E W ++G     L    +AI+ LS+AL+ +P   D  + 
Sbjct: 294 KRYDLSLACFDRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQPGHTDAEYY 353

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG   +   +  AA++   A V+L+ EN  A+   G AL  +  Y++A   + +A+++D 
Sbjct: 354 RGESYYALGNCEAAIDCYRAVVRLNPENAVAWNNCGNALYHLKHYEEALVCYERALEIDP 413

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
                W +       L++ +KAL C  Q L      + A++ +G+ L  LG++ +A+   
Sbjct: 414 ENRRVWNNKASVLSVLSHYDKALVCYDQELLAHPENADAWYNKGVALFVLGRYSEAVTCY 473

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           +  L IDP+  E      +    +    EA++ YD AL    D +E  
Sbjct: 474 AHVLEIDPARAEVWNTMGNALVILERSEEALECYDLALAASPDDIEAL 521



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 142/329 (43%), Gaps = 7/329 (2%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R+   +  + +   +RG  +    +Y  AI+ + Q +  DP + E    RG A +  
Sbjct: 166 CYDRVVALEPKNANAWYARGTIETLLSRYEDAIASYGQAVAIDPNHAETWYNRGCALSAL 225

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +  + AI  F  AI   P   E W  RG+A   L    EA+    +A    P+   I + 
Sbjct: 226 KRYDEAIGCFDRAIALRPDDAETWYNRGRALQNLERYEEALDCYERAFRINPDYPGIWNH 285

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +  V  K K ++ ++      ++++  +   +   GL   ++  Y  A E   +A++L  
Sbjct: 286 KATVLKKLKRYDLSLACFDRALRVNAVDAEIWHQKGLLYFTLKRYGDAIECLSQALKLQP 345

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              +A  +  + Y  L N E A++C + V+ ++   + A++  G  L+ L  +++A+   
Sbjct: 346 GHTDAEYYRGESYYALGNCEAAIDCYRAVVRLNPENAVAWNNCGNALYHLKHYEEALVCY 405

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
              L IDP N      +AS    +  Y +A+  YD  L    ++ +       A+Y K +
Sbjct: 406 ERALEIDPENRRVWNNKASVLSVLSHYDKALVCYDQELLAHPENAD-------AWYNKGV 458

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYW 697
           AL+   + +     +    +IDP   E W
Sbjct: 459 ALFVLGRYSEAVTCYAHVLEIDPARAEVW 487



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 9/195 (4%)

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           ++L  ++  A+   G A +  G+Y +A E + +AI+ +    +AW H            +
Sbjct: 1   MELPWKSVEAWCKKGRAYAEQGQYDRAVECYDQAIRQNTGAGDAWYHKGLALAAARRHRE 60

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           ALEC  QV+ ID    + +  RG  L+ LG+ ++AI      + + P +    ++R    
Sbjct: 61  ALECFDQVVRIDPTCGRFWLARGQTLYDLGECREAIGSCGQAVKLAPDSANAWFIRGHAL 120

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY---TASKINSEFC 681
             IG   EAI+ YD  + LE + ++ ++ +  A      Y+  I  Y    A +  +   
Sbjct: 121 RKIGLSPEAIECYDRVVALEPNRIDAWLARGTALAAERRYEAAIECYDRVVALEPKNANA 180

Query: 682 WFDIDGDIDPLFKEY 696
           W+   G I+ L   Y
Sbjct: 181 WY-ARGTIETLLSRY 194


>gi|429123131|ref|ZP_19183664.1| hypothetical protein A966_02421 [Brachyspira hampsonii 30446]
 gi|426280944|gb|EKV57947.1| hypothetical protein A966_02421 [Brachyspira hampsonii 30446]
          Length = 392

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 149/307 (48%), Gaps = 10/307 (3%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAF---QRELEAAISDFTEAIQSNPSAGEAWK 453
           Y  AI  F +++K D    EA   R  A+A    +   ++AI D+T A++ N     A+ 
Sbjct: 22  YNLAIEYFSEVIKLDSTIYEAYYNRANAKANIDNENSYKSAIEDYTWALKLNDKFAAAYY 81

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG    +LG + +A++D  KA+E   N  +  + R       KD+  ++ED +  +++ 
Sbjct: 82  NRGIMNRSLGNTEDALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVY 141

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
                AY    L+ +++GEYK+A + + KAI+ + +F +A+ +     + L N  +A++ 
Sbjct: 142 PHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFTDAYNNRGNVKEKLGNYNEAIDD 201

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
               ++I++ F+  Y  R      +  +K A++D    + IDP+  +    R      + 
Sbjct: 202 YTNAIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKIDPNYSKAYLNRGIIAITME 261

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLF 693
            Y+EAIKD+D  ++L+ +  +       A+Y K +AL      +    ++D    ++P +
Sbjct: 262 AYQEAIKDFDKVIELDPNIAD-------AYYNKAVALNHLGIYDESILYYDQAIKLNPDY 314

Query: 694 KEYWCKR 700
            E +  R
Sbjct: 315 SESYFNR 321



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 130/265 (49%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           NE  Y SAI  +   LK +  +  A   RG         E A+ DF +AI+ N +  EA+
Sbjct: 55  NENSYKSAIEDYTWALKLNDKFAAAYYNRGIMNRSLGNTEDALKDFDKAIELNYNLEEAY 114

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             R   +A+L +   +I+D +KA+E  P+ AD  + R +      ++  A++D    ++ 
Sbjct: 115 YVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEY 174

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           +     AY   G     +G Y +A + +  AI ++R F + + +       + + + A+E
Sbjct: 175 NSHFTDAYNNRGNVKEKLGNYNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVE 234

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              +++ ID  +SKAY  RG++   +  +++AIKD    + +DP+  +  Y +A   + +
Sbjct: 235 DFDELIKIDPNYSKAYLNRGIIAITMEAYQEAIKDFDKVIELDPNIADAYYNKAVALNHL 294

Query: 633 GEYREAIKDYDAALDLELDSMEKFV 657
           G Y E+I  YD A+ L  D  E + 
Sbjct: 295 GIYDESILYYDQAIKLNPDYSESYF 319



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 5/222 (2%)

Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K+I +++ L      R   + +   Y  +I  +++ ++  P + +A   R  ++    E 
Sbjct: 102 KAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALGEY 161

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AI D+ +AI+ N    +A+  RG  +  LG   EAI D + A+      AD    R  
Sbjct: 162 KEAIKDYDKAIEYNSHFTDAYNNRGNVKEKLGNYNEAIDDYTNAIHINREFADGYFNRAN 221

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             F  KD+  AVED    +K+D     AY   G+   ++  Y++A +   K I+LD N  
Sbjct: 222 AKFHIKDYKGAVEDFDELIKIDPNYSKAYLNRGIIAITMEAYQEAIKDFDKVIELDPNIA 281

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           +A+ +       L   ++++    Q + ++  +S++Y  RG+
Sbjct: 282 DAYYNKAVALNHLGIYDESILYYDQAIKLNPDYSESYFNRGI 323



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 9/197 (4%)

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI---GEYKKAEEAHLKAIQLDRNF 550
           FK K++N A+E  S  +KLD     AY     A ++I     YK A E +  A++L+  F
Sbjct: 17  FKNKNYNLAIEYFSEVIKLDSTIYEAYYNRANAKANIDNENSYKSAIEDYTWALKLNDKF 76

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +     + L N+E AL+   + + ++    +AY++R      L  +K +I+D + 
Sbjct: 77  AAAYYNRGIMNRSLGNTEDALKDFDKAIELNYNLEEAYYVRANTKASLKDYKGSIEDYNK 136

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQ 665
            + + P   +  Y RA   +A+GEY+EAIKDYD A++      + +     V + L  Y 
Sbjct: 137 AIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFTDAYNNRGNVKEKLGNYN 196

Query: 666 KEIALYT-ASKINSEFC 681
           + I  YT A  IN EF 
Sbjct: 197 EAIDDYTNAIHINREFA 213



 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +L+++ KAI  L+  L ++Y +     RA   + L+ +K  I D +KA+++ P    AY 
Sbjct: 96  ALKDFDKAIE-LNYNLEEAYYV-----RANTKASLKDYKGSIEDYNKAIEVYPHFADAYY 149

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALH 135
            +  + +ALG  +EA+  ++K  E+  H
Sbjct: 150 NRALSKNALGEYKEAIKDYDKAIEYNSH 177


>gi|302838049|ref|XP_002950583.1| hypothetical protein VOLCADRAFT_91119 [Volvox carteri f. nagariensis]
 gi|300264132|gb|EFJ48329.1| hypothetical protein VOLCADRAFT_91119 [Volvox carteri f. nagariensis]
          Length = 1402

 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 148/324 (45%), Gaps = 41/324 (12%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR------------ELEAA 434
            R  A   +GK   A+  + + L+ D  + + L  RG    + R            ELEAA
Sbjct: 856  RAFALRQQGKLVEAVREYTRALELDSNHFKTLFNRGFT--YDRGHGWLSRLPPLGELEAA 913

Query: 435  ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
            + D+T A+Q +P +  A   RG  R  L +   A+ D + A+  EPNSAD  H RG    
Sbjct: 914  VEDYTAALQVDPQSSYAHYNRGITRDRLQDFAGAVADFTAAICLEPNSADFYHNRGFALR 973

Query: 495  KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            K   F AAV+D +  +KL+  +  AY         +   ++A + + KA++++ N   A 
Sbjct: 974  KQGMFEAAVQDYTMAIKLNPNHCRAYYNRAFCHDRLNHVQQAIDDYTKALEMEPNNATAL 1033

Query: 555  GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA---------- 604
             +    ++    S+ AL+   + +  D   +++Y+ RG+LL  LG+ ++A          
Sbjct: 1034 LNRGSLHERNGRSDMALQDFDRAIMGDPNCAQSYNARGVLLQHLGRLEEAQSDLDMAVVL 1093

Query: 605  ------------IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL---- 648
                         +DL+  + +DP ++     RA C+  +GEY  AI+DY  A+ L    
Sbjct: 1094 MQPPSALLFRNRAQDLTRAISLDPGDLLSYSRRAHCFRRMGEYESAIRDYTRAITLSPNN 1153

Query: 649  -ELDSMEKFVLQCLAFYQKEIALY 671
             +L ++  +    + +Y + +  Y
Sbjct: 1154 PKLHTIRAYCYAMIEWYNEAVMDY 1177



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 19/285 (6%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RGI +     +A A++ F   +  +P   +    RG A   Q   EAA+ D+T AI+ N
Sbjct: 933  NRGITRDRLQDFAGAVADFTAAICLEPNSADFYHNRGFALRKQGMFEAAVQDYTMAIKLN 992

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+   A+  R      L    +AI D +KALE EPN+A  L  RG ++ +    + A++D
Sbjct: 993  PNHCRAYYNRAFCHDRLNHVQQAIDDYTKALEMEPNNATALLNRGSLHERNGRSDMALQD 1052

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                +  D     +Y   G+ L  +G  ++A+        LD   +     L Q    L 
Sbjct: 1053 FDRAIMGDPNCAQSYNARGVLLQHLGRLEEAQS------DLDMAVV-----LMQPPSALL 1101

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
               +A + L + + +D     +Y  R      +G+++ AI+D +  + + P+N +   +R
Sbjct: 1102 FRNRAQD-LTRAISLDPGDLLSYSRRAHCFRRMGEYESAIRDYTRAITLSPNNPKLHTIR 1160

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
            A CY  I  Y EA+ DYD  + LE  +         A Y + IAL
Sbjct: 1161 AYCYAMIEWYNEAVMDYDIVISLEPGNAH-------ASYNRSIAL 1198



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 63/131 (48%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L G    R   R+    I++ TE + SNP    A + R Q+   LGE   A+ D +  L 
Sbjct: 53  LPGGNGRRTITRDYHRLINECTEKLLSNPKHTLAMRLRAQSYRMLGEDDAALADYNSLLA 112

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
            EP + D L  RG +  + +  + A++  +A ++ + ++  A     +  S+ G + +A 
Sbjct: 113 LEPTNVDALFYRGTILERQQHIDEAIQCYTAVLQQEPQHHKALYNRAVCFSAKGSFSQAI 172

Query: 538 EAHLKAIQLDR 548
           E    AI+LD+
Sbjct: 173 EDFSAAIELDQ 183



 Score = 43.1 bits (100), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 48/91 (52%)

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           Q Y+ L   + AL     +L ++     A   RG +L       +AI+  ++ L  +P +
Sbjct: 92  QSYRMLGEDDAALADYNSLLALEPTNVDALFYRGTILERQQHIDEAIQCYTAVLQQEPQH 151

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            + LY RA C+ A G + +AI+D+ AA++L+
Sbjct: 152 HKALYNRAVCFSAKGSFSQAIEDFSAAIELD 182


>gi|334116936|ref|ZP_08491028.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
 gi|333461756|gb|EGK90361.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
          Length = 732

 Score =  112 bits (279), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 118/245 (48%)

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
             RG A+A Q +   AI+D+T+AI  N    E + +R  AR  +G + +AIQD ++A++ 
Sbjct: 346 FARGVAKAQQGDTTGAIADYTQAIALNAGDAETYYKRANARYDMGATEQAIQDYTQAIKV 405

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
            P+    L+ RG+      D   AVED +  V+L+  +  AY+  GLA   +G+Y+ A E
Sbjct: 406 HPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIE 465

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
            + +AI+L  N   A+ +         +   A+    Q L I  + +  Y+ RG     L
Sbjct: 466 DYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNL 525

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
             ++ A++D +  + + P   +    R S Y  +  Y +AI D    + L       +  
Sbjct: 526 ADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLAPKDEAAYNN 585

Query: 659 QCLAF 663
           +C+A+
Sbjct: 586 RCIAY 590



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 132/262 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R  A+ + G    AI  + Q +K  P + +AL  RG AR    +   A+ DFT+ ++ NP
Sbjct: 382 RANARYDMGATEQAIQDYTQAIKVHPSHTKALYNRGMARLDIGDKRGAVEDFTQVVRLNP 441

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S GEA+ +RG A   LG+   AI+D ++A+   PN A     RG+      D   A+ D 
Sbjct: 442 SDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADF 501

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +++  +    Y   G A  ++ +Y+ A E + KAI+L  +  +A+ +    Y +LA 
Sbjct: 502 TQALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLAT 561

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            +KA+    + + +  +   AY+ R +    L Q +KA +D S  +G++ +N +    R 
Sbjct: 562 YDKAIADCTEGIRLAPKDEAAYNNRCIAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRG 621

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
               A G+ + A++D+  A+ L
Sbjct: 622 LARLASGDKQGAVEDFTQAIRL 643



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 132/271 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+++ G    A+  F Q+++ +P   EA   RG A     +   AI D+T+AI+ +
Sbjct: 415 NRGMARLDIGDKRGAVEDFTQVVRLNPSDGEAYSQRGLAYYDLGDYRTAIEDYTQAIRLS 474

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG AR+A G+   A+ D ++AL+  P  A + + RG   F   D+  A+ED
Sbjct: 475 PNDATAYSNRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADYQGAMED 534

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L  +   AYT    A  ++  Y KA     + I+L      A+ +    Y +L 
Sbjct: 535 YTKAIELQPDLADAYTNRCSAYLNLATYDKAIADCTEGIRLAPKDEAAYNNRCIAYLNLK 594

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             +KA E     + ++    KAY  RGL     G  + A++D +  + ++PS+      R
Sbjct: 595 QFQKASEDCSLTIGLNGNNPKAYSNRGLARLASGDKQGAVEDFTQAIRLNPSDAVAYSNR 654

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            + Y  +  Y  A++D+  +L L   +   F
Sbjct: 655 GTIYSELKNYPLAVEDFAHSLRLNPKNASAF 685



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 130/265 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  + G Y +AI  + Q ++  P    A   RG AR+   +   A++DFT+A+Q +P
Sbjct: 450 RGLAYYDLGDYRTAIEDYTQAIRLSPNDATAYSNRGLARSAAGDKTGAMADFTQALQISP 509

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG+AR  L +   A++D +KA+E +P+ AD    R         ++ A+ D 
Sbjct: 510 KQAGVYYSRGRARFNLADYQGAMEDYTKAIELQPDLADAYTNRCSAYLNLATYDKAIADC 569

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++L  ++++AY    +A  ++ +++KA E     I L+ N  +A+ +         +
Sbjct: 570 TEGIRLAPKDEAAYNNRCIAYLNLKQFQKASEDCSLTIGLNGNNPKAYSNRGLARLASGD 629

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + A+E   Q + ++   + AY  RG +   L  +  A++D +  L ++P N    Y R 
Sbjct: 630 KQGAVEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPLAVEDFAHSLRLNPKNASAFYSRG 689

Query: 627 SCYHAIGEYREAIKDYDAALDLELD 651
                + +   AI+D+  A  L L+
Sbjct: 690 LVRRQLKDRAGAIEDFQKAATLFLE 714



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 104/223 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+   G    A++ F Q L+  P        RG AR    + + A+ D+T+AI+  
Sbjct: 483 NRGLARSAAGDKTGAMADFTQALQISPKQAGVYYSRGRARFNLADYQGAMEDYTKAIELQ 542

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  R  A   L    +AI D ++ +   P      + R I     K F  A ED
Sbjct: 543 PDLADAYTNRCSAYLNLATYDKAIADCTEGIRLAPKDEAAYNNRCIAYLNLKQFQKASED 602

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  + L+  N  AY+  GLA  + G+ + A E   +AI+L+ +   A+ +    Y +L 
Sbjct: 603 CSLTIGLNGNNPKAYSNRGLARLASGDKQGAVEDFTQAIRLNPSDAVAYSNRGTIYSELK 662

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N   A+E     L ++ + + A++ RGL+   L     AI+D 
Sbjct: 663 NYPLAVEDFAHSLRLNPKNASAFYSRGLVRRQLKDRAGAIEDF 705



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 3/171 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +R  A +N   Y  AI+   + ++  P    A   R  A    ++ + A  D +  
Sbjct: 547 DAYTNRCSAYLNLATYDKAIADCTEGIRLAPKDEAAYNNRCIAYLNLKQFQKASEDCSLT 606

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I  N +  +A+  RG AR A G+   A++D ++A+   P+ A     RG +  + K++  
Sbjct: 607 IGLNGNNPKAYSNRGLARLASGDKQGAVEDFTQAIRLNPSDAVAYSNRGTIYSELKNYPL 666

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
           AVED +  ++L+ +N SA+   GL    + +   A E   KA  L   FLE
Sbjct: 667 AVEDFAHSLRLNPKNASAFYSRGLVRRQLKDRAGAIEDFQKAATL---FLE 714



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 46/89 (51%)

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           Q + ++   ++ Y+ R    + +G  ++AI+D +  + + PS+ + LY R      IG+ 
Sbjct: 367 QAIALNAGDAETYYKRANARYDMGATEQAIQDYTQAIKVHPSHTKALYNRGMARLDIGDK 426

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFY 664
           R A++D+   + L     E +  + LA+Y
Sbjct: 427 RGAVEDFTQVVRLNPSDGEAYSQRGLAYY 455


>gi|170744697|ref|YP_001773352.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
 gi|168198971|gb|ACA20918.1| peptidase C14 caspase catalytic subunit p20 [Methylobacterium sp.
           4-46]
          Length = 839

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 134/296 (45%), Gaps = 1/296 (0%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           TR    K   +D   +RGIA    G Y  A++   Q L+ DP     L  RG A   + E
Sbjct: 75  TRALDRKPGFLDALRNRGIAWQMLGDYDRAVADLTQALRLDPRSAATLNARGAALLSKEE 134

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+DFT AI   P    A+  RG A  A  +   A+ D +  +  +PN       R 
Sbjct: 135 YDRAITDFTAAIAREPGFFRAFANRGLAHLAKRQLDRALDDFNALIRLQPNEPIGYENRA 194

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            +     +F+ A+ D +  ++L   N  AY+  G A    GE ++A   H +A++L R  
Sbjct: 195 ALLIDRGEFDGAIADYNTAIRLRPRNWQAYSQRGEAWRLKGEVQRALADHDRAVELGRT- 253

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            EA+ +     +     ++AL    + L  + RF+ A   RG +L   G+  +AI DL+ 
Sbjct: 254 PEAYTNRALVLKQTGQLDRALADCDEALLHNPRFALALANRGEILRLRGEVGRAIDDLTR 313

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            + ++P +   L  R   Y   G+   AI DYD AL    D +  F  + LA  Q+
Sbjct: 314 AIALNPKSPVALTFRGDAYRQAGQPDRAIADYDEALRAVPDFVAAFAGRGLAREQR 369



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 91/197 (46%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +  RG A+   G+   A++D ++AL+ +P   D L  RGI      D++ AV DL+  ++
Sbjct: 54  YNNRGVAKVQAGDQRGAVEDFTRALDRKPGFLDALRNRGIAWQMLGDYDRAVADLTQALR 113

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           LD  + +     G AL S  EY +A      AI  +  F  A+ +    +      ++AL
Sbjct: 114 LDPRSAATLNARGAALLSKEEYDRAITDFTAAIAREPGFFRAFANRGLAHLAKRQLDRAL 173

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           +    ++ +       Y  R  LL   G+   AI D ++ + + P N +    R   +  
Sbjct: 174 DDFNALIRLQPNEPIGYENRAALLIDRGEFDGAIADYNTAIRLRPRNWQAYSQRGEAWRL 233

Query: 632 IGEYREAIKDYDAALDL 648
            GE + A+ D+D A++L
Sbjct: 234 KGEVQRALADHDRAVEL 250



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 9/163 (5%)

Query: 493 NFKFKDFNAAVEDLSACVKL-DKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           N    D NA +    AC +L D+E         Y   G+A    G+ + A E   +A+  
Sbjct: 24  NRSMADPNAGI---PACTRLLDQERNPEVVPGLYNNRGVAKVQAGDQRGAVEDFTRALDR 80

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
              FL+A  +    +Q L + ++A+  L Q L +D R +   + RG  L    ++ +AI 
Sbjct: 81  KPGFLDALRNRGIAWQMLGDYDRAVADLTQALRLDPRSAATLNARGAALLSKEEYDRAIT 140

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           D ++ +  +P        R   + A  +   A+ D++A + L+
Sbjct: 141 DFTAAIAREPGFFRAFANRGLAHLAKRQLDRALDDFNALIRLQ 183



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 60/143 (41%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G+   A++  D+ L  +P +  AL  RG     + E+  AI D T AI  N
Sbjct: 259 NRALVLKQTGQLDRALADCDEALLHNPRFALALANRGEILRLRGEVGRAIDDLTRAIALN 318

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +  A   RG A    G+   AI D  +AL   P+       RG+   +  + + A  D
Sbjct: 319 PKSPVALTFRGDAYRQAGQPDRAIADYDEALRAVPDFVAAFAGRGLAREQRGEASLARAD 378

Query: 506 LSACVKLDKENKSAYTYLGLALS 528
               + L  +  +A      AL+
Sbjct: 379 FERAMGLSPDRDAALARPAQALA 401



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 56/132 (42%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           PEA   R        +L+ A++D  EA+  NP    A   RG+     GE   AI DL++
Sbjct: 254 PEAYTNRALVLKQTGQLDRALADCDEALLHNPRFALALANRGEILRLRGEVGRAIDDLTR 313

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A+   P S   L  RG    +    + A+ D    ++   +  +A+   GLA    GE  
Sbjct: 314 AIALNPKSPVALTFRGDAYRQAGQPDRAIADYDEALRAVPDFVAAFAGRGLAREQRGEAS 373

Query: 535 KAEEAHLKAIQL 546
            A     +A+ L
Sbjct: 374 LARADFERAMGL 385


>gi|124024559|ref|YP_001018866.1| hypothetical protein P9303_28711 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964845|gb|ABM79601.1| Hypothetical protein P9303_28711 [Prochlorococcus marinus str. MIT
           9303]
          Length = 334

 Score =  111 bits (278), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 130/261 (49%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI +   G +  AI+ F + ++ DP Y  A   RG A++  ++ + AI+D+ +AI+ +P 
Sbjct: 53  GIEKGKRGDFKGAIADFTRAIEIDPQYARAYGNRGFAKSNLKDYQGAITDYKKAIEIDPQ 112

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+  RG A++ L +   AI D ++A+E  P  AD    RG+     KD+  A+ D +
Sbjct: 113 YARAYFNRGFAKSNLKDYQGAIADFTRAIEINPQLADAYFNRGLAKDDLKDYQGAIADYT 172

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++++ +  +AY   GLA    G+ + A     KAI+++  +  A+ +  +   DL + 
Sbjct: 173 KAIEINPQYAAAYNNRGLAKVKSGDTQGAIADWGKAIEINPQYAAAYYNRGRAKYDLKSY 232

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           + A+    + + I+ + + AY+ RGL    L  ++ AI D +  + I+P        R  
Sbjct: 233 QAAIADYNKAIEINPQLAIAYYNRGLAKSDLQDYQAAIADYTKAIEINPQLSRVYRNRGI 292

Query: 628 CYHAIGEYREAIKDYDAALDL 648
                G+ + A  DY  A+ L
Sbjct: 293 TKENNGDLKGACSDYKKAVSL 313



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/173 (27%), Positives = 86/173 (49%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG+A+ +   Y  AI+ + + ++ +P Y  A   RG A+    + + AI+D+ +A
Sbjct: 149 DAYFNRGLAKDDLKDYQGAIADYTKAIEINPQYAAAYNNRGLAKVKSGDTQGAIADWGKA 208

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP    A+  RG+A+  L     AI D +KA+E  P  A   + RG+     +D+ A
Sbjct: 209 IEINPQYAAAYYNRGRAKYDLKSYQAAIADYNKAIEINPQLAIAYYNRGLAKSDLQDYQA 268

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           A+ D +  ++++ +    Y   G+   + G+ K A   + KA+ L       W
Sbjct: 269 AIADYTKAIEINPQLSRVYRNRGITKENNGDLKGACSDYKKAVSLGNQGTTQW 321



 Score = 52.8 bits (125), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 64/129 (49%)

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G+     G++K A     +AI++D  +  A+G+      +L + + A+   ++ + 
Sbjct: 49  YVNAGIEKGKRGDFKGAIADFTRAIEIDPQYARAYGNRGFAKSNLKDYQGAITDYKKAIE 108

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           ID ++++AY  RG     L  ++ AI D +  + I+P   +  + R      + +Y+ AI
Sbjct: 109 IDPQYARAYFNRGFAKSNLKDYQGAIADFTRAIEINPQLADAYFNRGLAKDDLKDYQGAI 168

Query: 640 KDYDAALDL 648
            DY  A+++
Sbjct: 169 ADYTKAIEI 177


>gi|13472042|ref|NP_103609.1| hypothetical protein mll2209 [Mesorhizobium loti MAFF303099]
 gi|14022787|dbj|BAB49395.1| mll2209 [Mesorhizobium loti MAFF303099]
          Length = 658

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 133/271 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A + +G Y  AI+ + Q +  D   P      G A   +  LE AI+D+++AI  + 
Sbjct: 176 RGNAYLRKGDYDQAITSYSQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDA 235

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA++ R  A    G++ +A+ D ++A+  +P  A+    R  +  + +D++ A+ D 
Sbjct: 236 NHAEAYRWRADAWVKRGDTDQALSDYTEAIRLDPGDAETFRNRARIWERKRDYDRAIADY 295

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +     +  AY   G   S   E  +A   ++KA   D N++ A+ +L   + D  +
Sbjct: 296 DQAIAFAPNDAVAYNGRGWMWSLKHETDRAIVDYVKATAFDPNYVLAYDNLGLAWWDKGD 355

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++A+    Q + +D +++ AY+ RGL      Q+  AI D +  + ID   +     R 
Sbjct: 356 LDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQYDLAIADYNMAILIDAGFVSAYRNRG 415

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           + ++  G++  AI D+D A+D + D  + +V
Sbjct: 416 NAWNRKGQFDYAIADFDQAIDHDPDDADAYV 446



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 1/231 (0%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           A   R  A     E + AI+D+ +AI  NP   EA+  RG       +   A+ D  KA+
Sbjct: 69  AYFNRANALDRNGEFDRAIADYDKAIAFNPKDAEAFNNRGLIWGHKKDFDRALADYDKAI 128

Query: 477 EFEPNSADILHERGIVNFKFK-DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           E  P  A     RG++    K D+  A+ D    ++LD EN   Y   G A    G+Y +
Sbjct: 129 ELNPQIAIAYANRGLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNLRGNAYLRKGDYDQ 188

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A  ++ +AI LD      + +L   +    N E+A+    Q + +D   ++AY  R    
Sbjct: 189 AITSYSQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAW 248

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
              G   +A+ D +  + +DP + E    RA  +    +Y  AI DYD A+
Sbjct: 249 VKRGDTDQALSDYTEAIRLDPGDAETFRNRARIWERKRDYDRAIADYDQAI 299



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 121/259 (46%), Gaps = 1/259 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +R  A    G++  AI+ +D+ +  +P   EA   RG     +++ + A++D+ +AI+ 
Sbjct: 71  FNRANALDRNGEFDRAIADYDKAIAFNPKDAEAFNNRGLIWGHKKDFDRALADYDKAIEL 130

Query: 445 NPSAGEAWKRRGQARAALG-ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
           NP    A+  RG     +  + V+AI D  KA+  +P +  + + RG    +  D++ A+
Sbjct: 131 NPQIAIAYANRGLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNLRGNAYLRKGDYDQAI 190

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
              S  + LD ++ + Y  LGLA ++ G  ++A   + +AI LD N  EA+      +  
Sbjct: 191 TSYSQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVK 250

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
             ++++AL    + + +D   ++ +  R  +      + +AI D    +   P++     
Sbjct: 251 RGDTDQALSDYTEAIRLDPGDAETFRNRARIWERKRDYDRAIADYDQAIAFAPNDAVAYN 310

Query: 624 LRASCYHAIGEYREAIKDY 642
            R   +    E   AI DY
Sbjct: 311 GRGWMWSLKHETDRAIVDY 329



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 116/279 (41%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A   +G    AI+ + Q +  D  + EA   R  A   + + + A+SD+TEAI+ +P 
Sbjct: 211 GLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVKRGDTDQALSDYTEAIRLDPG 270

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             E ++ R +      +   AI D  +A+ F PN A   + RG +     + + A+ D  
Sbjct: 271 DAETFRNRARIWERKRDYDRAIADYDQAIAFAPNDAVAYNGRGWMWSLKHETDRAIVDYV 330

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
                D     AY  LGLA    G+  +A  A  +A+ +D  +  A+        D    
Sbjct: 331 KATAFDPNYVLAYDNLGLAWWDKGDLDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQY 390

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           + A+      + ID  F  AY  RG   +  GQ   AI D    +  DP + +    R  
Sbjct: 391 DLAIADYNMAILIDAGFVSAYRNRGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGR 450

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
                 +Y +AI D D A+ +   S      + LA   K
Sbjct: 451 SRIYKADYTKAIADLDQAIRIGPKSARAHDTRGLAMVYK 489



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 78/151 (51%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++++ +Y  AI+ ++  +  D  +  A   RG A   + + + AI+DF +AI  +P
Sbjct: 380 RGLARMDKNQYDLAIADYNMAILIDAGFVSAYRNRGNAWNRKGQFDYAIADFDQAIDHDP 439

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG++R    +  +AI DL +A+   P SA     RG+      D+  A+ D 
Sbjct: 440 DDADAYVGRGRSRIYKADYTKAIADLDQAIRIGPKSARAHDTRGLAMVYKADYAGALADY 499

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
              ++L  +N SAY   G+A    G   KA+
Sbjct: 500 DEAIRLSPKNASAYRNRGIASFYFGPPAKAQ 530



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 115/278 (41%), Gaps = 5/278 (1%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           S++IS+D   +     R  A V  G    A+S + + ++ DP   E    R      +R+
Sbjct: 228 SQAISLDANHAEAYRWRADAWVKRGDTDQALSDYTEAIRLDPGDAETFRNRARIWERKRD 287

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+D+ +AI   P+   A+  RG   +   E+  AI D  KA  F+PN        G
Sbjct: 288 YDRAIADYDQAIAFAPNDAVAYNGRGWMWSLKHETDRAIVDYVKATAFDPNYVLAYDNLG 347

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +  +   D + A+      V +D +   AY   GLA     +Y  A   +  AI +D  F
Sbjct: 348 LAWWDKGDLDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQYDLAIADYNMAILIDAGF 407

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
           + A+ +    +      + A+    Q +  D   + AY  RG        + KAI DL  
Sbjct: 408 VSAYRNRGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLDQ 467

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            + I P +      R        +Y  A+ DYD A+ L
Sbjct: 468 AIRIGPKSARAHDTRGLAMVYKADYAGALADYDEAIRL 505



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 98/245 (40%), Gaps = 43/245 (17%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A  ++G    AIS FDQ +  DP Y  A   RG AR  + + + AI+D+  AI  +  
Sbjct: 347 GLAWWDKGDLDRAISAFDQAVIVDPKYAPAYNDRGLARMDKNQYDLAIADYNMAILIDAG 406

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A++ RG A    G+   AI D  +A++ +P+ AD    RG       D+  A+ DL 
Sbjct: 407 FVSAYRNRGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLD 466

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +++  ++  A+   GLA+    +Y  A   + +AI+L                     
Sbjct: 467 QAIRIGPKSARAHDTRGLAMVYKADYAGALADYDEAIRLS-------------------- 506

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
                          + + AY  RG+     G   KA  D      I P +         
Sbjct: 507 --------------PKNASAYRNRGIASFYFGPPAKAQADFEQAAAIKPGD--------- 543

Query: 628 CYHAI 632
            YHAI
Sbjct: 544 SYHAI 548



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 68/147 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A   +G++  AI+ FDQ +  DP   +A +GRG +R ++ +   AI+D  +AI+  
Sbjct: 413 NRGNAWNRKGQFDYAIADFDQAIDHDPDDADAYVGRGRSRIYKADYTKAIADLDQAIRIG 472

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +  A   RG A     +   A+ D  +A+   P +A     RGI +F F     A  D
Sbjct: 473 PKSARAHDTRGLAMVYKADYAGALADYDEAIRLSPKNASAYRNRGIASFYFGPPAKAQAD 532

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGE 532
                 +   +     +L LA    G+
Sbjct: 533 FEQAAAIKPGDSYHAIWLDLARRRNGQ 559



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 115/267 (43%), Gaps = 6/267 (2%)

Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPM 413
           +N   RN +F        K+I+ + + +     RG+   ++  +  A++ +D+ ++ +P 
Sbjct: 74  ANALDRNGEFDRAIADYDKAIAFNPKDAEAFNNRGLIWGHKKDFDRALADYDKAIELNPQ 133

Query: 414 YPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
              A   RG      + +   AI+DF +AI+ +P     +  RG A    G+  +AI   
Sbjct: 134 IAIAYANRGLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNLRGNAYLRKGDYDQAITSY 193

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           S+A+  +    +     G+      +   A+ D S  + LD  +  AY +   A    G+
Sbjct: 194 SQAIFLDSQDPNQYFNLGLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVKRGD 253

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
             +A   + +AI+LD    E + +  + ++   + ++A+    Q +      + AY+ RG
Sbjct: 254 TDQALSDYTEAIRLDPGDAETFRNRARIWERKRDYDRAIADYDQAIAFAPNDAVAYNGRG 313

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            +     +  +AI D       DP+ +
Sbjct: 314 WMWSLKHETDRAIVDYVKATAFDPNYV 340



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 15/156 (9%)

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA-------WGHLTQFYQDLANSEKAL 571
           AY     AL   GE+ +A   + KAI  +    EA       WGH   F + LA+ +KA+
Sbjct: 69  AYFNRANALDRNGEFDRAIADYDKAIAFNPKDAEAFNNRGLIWGHKKDFDRALADYDKAI 128

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           E   Q+       + AY  RGL+ + +   + KAI D    + +DP N     LR + Y 
Sbjct: 129 ELNPQI-------AIAYANRGLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNLRGNAYL 181

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
             G+Y +AI  Y  A+ L+     ++    LA+  K
Sbjct: 182 RKGDYDQAITSYSQAIFLDSQDPNQYFNLGLAWTTK 217



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D  + RG +++ +  Y  AI+  DQ ++  P    A   RG A  ++ +   A++D+ E
Sbjct: 442 ADAYVGRGRSRIYKADYTKAIADLDQAIRIGPKSARAHDTRGLAMVYKADYAGALADYDE 501

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           AI+ +P    A++ RG A    G   +A  D  +A   +P
Sbjct: 502 AIRLSPKNASAYRNRGIASFYFGPPAKAQADFEQAAAIKP 541



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/170 (20%), Positives = 74/170 (43%), Gaps = 1/170 (0%)

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           +F+ A+ D    +  + ++  A+   GL      ++ +A   + KAI+L+     A+ + 
Sbjct: 82  EFDRAIADYDKAIAFNPKDAEAFNNRGLIWGHKKDFDRALADYDKAIELNPQIAIAYANR 141

Query: 558 TQFYQDLANSE-KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
              + D+ +   KA+    + + +D   +  Y+LRG      G + +AI   S  + +D 
Sbjct: 142 GLIWNDIKHDYVKAIADFDKAIRLDPENNGLYNLRGNAYLRKGDYDQAITSYSQAIFLDS 201

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            +    +     +   G    AI DY  A+ L+ +  E +  +  A+ ++
Sbjct: 202 QDPNQYFNLGLAWTTKGNLERAIADYSQAISLDANHAEAYRWRADAWVKR 251


>gi|428304133|ref|YP_007140958.1| hypothetical protein Cri9333_0484 [Crinalium epipsammum PCC 9333]
 gi|428245668|gb|AFZ11448.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 1192

 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 142/282 (50%), Gaps = 1/282 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG   VN+ ++  AI+ ++  +K +P Y  A + RG   + Q++ + AI D+  AI+ NP
Sbjct: 688 RGNVYVNQKQWDKAINDYNTAIKINPQYANAYLMRGGVYSDQKQWDKAIDDYNTAIKINP 747

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG   +   +  +AI D + A++   N+A     RG+V +K K +N A++D 
Sbjct: 748 QYANAYLMRGDVYSDQKQWDKAIDDYNTAIKINSNNAWAYSARGLVYYKQKQWNKAIDDY 807

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +K++  +  AY+  GL      ++ KA + +  AI+++  + +A+    + +     
Sbjct: 808 NTAIKINPGDAFAYSARGLVYKEQKQWDKAIDDYTTAIKINPQYADAYSLRGRVHDQQKQ 867

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            +KA++     + I+   +  Y LRGL+     Q  KAI D ++ + I+P +     +R 
Sbjct: 868 WDKAIDDFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRG 927

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-YQKE 667
             Y    ++ +AI D+ +A+ +       ++ +   + YQK+
Sbjct: 928 LVYQEQKQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQKQ 969



 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 135/282 (47%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG+    + ++  AI  ++  +K +P    A   RG     Q++ + AI D+T AI+ N
Sbjct: 789  ARGLVYYKQKQWNKAIDDYNTAIKINPGDAFAYSARGLVYKEQKQWDKAIDDYTTAIKIN 848

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P   +A+  RG+      +  +AI D + A++  PN+A+    RG+V    K ++ A++D
Sbjct: 849  PQYADAYSLRGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDD 908

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  +K++  +  AY+  GL      ++ KA +    AI+++     A+    + Y    
Sbjct: 909  FTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQK 968

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +KA++  +  + I+   + AY+ RG +     Q   AI D +S + I+P   E  Y R
Sbjct: 969  QWDKAIDDFKSAIKINPNDALAYYNRGNVYVNQKQWDLAINDYNSAIKINPQYAEAYYNR 1028

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
               Y    ++  A+ D++ A+ +     E +  +   ++ +E
Sbjct: 1029 GIVYSNQKKWELALADWNQAIKINPKFAEAYFNRGFVYHTQE 1070



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 128/263 (48%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG+    + ++  AI  +   +K +P Y +A   RG     Q++ + AI DFT AI+ N
Sbjct: 823  ARGLVYKEQKQWDKAIDDYTTAIKINPQYADAYSLRGRVHDQQKQWDKAIDDFTTAIKIN 882

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P+    +  RG       +  +AI D + A++  P+ A     RG+V  + K ++ A++D
Sbjct: 883  PNNANDYSLRGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDD 942

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
              + +K++  + SAY   G   S   ++ KA +    AI+++ N   A+ +    Y +  
Sbjct: 943  FKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIKINPNDALAYYNRGNVYVNQK 1002

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              + A+      + I+ ++++AY+ RG++     + + A+ D +  + I+P   E  + R
Sbjct: 1003 QWDLAINDYNSAIKINPQYAEAYYNRGIVYSNQKKWELALADWNQAIKINPKFAEAYFNR 1062

Query: 626  ASCYHAIGEYREAIKDYDAALDL 648
               YH    Y  A+ DY  AL +
Sbjct: 1063 GFVYHTQENYSAALSDYKQALSI 1085



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 143/303 (47%), Gaps = 6/303 (1%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            L RG    ++ ++  AI  ++  +K +     A   RG     Q++   AI D+  AI+ 
Sbjct: 754  LMRGDVYSDQKQWDKAIDDYNTAIKINSNNAWAYSARGLVYYKQKQWNKAIDDYNTAIKI 813

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            NP    A+  RG       +  +AI D + A++  P  AD    RG V+ + K ++ A++
Sbjct: 814  NPGDAFAYSARGLVYKEQKQWDKAIDDYTTAIKINPQYADAYSLRGRVHDQQKQWDKAID 873

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            D +  +K++  N + Y+  GL   +  ++ KA +    AI+++ +   A+      YQ+ 
Sbjct: 874  DFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQ 933

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               +KA++  +  + I+   + AY  RG +     Q  KAI D  S + I+P++    Y 
Sbjct: 934  KQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIKINPNDALAYYN 993

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK---EIALY---TASKINS 678
            R + Y    ++  AI DY++A+ +     E +  + + +  +   E+AL     A KIN 
Sbjct: 994  RGNVYVNQKQWDLAINDYNSAIKINPQYAEAYYNRGIVYSNQKKWELALADWNQAIKINP 1053

Query: 679  EFC 681
            +F 
Sbjct: 1054 KFA 1056



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 131/282 (46%), Gaps = 7/282 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG    ++ ++  AI  ++  +K +P Y  A + RG   + Q++ + AI D+  AI+ 
Sbjct: 720 LMRGGVYSDQKQWDKAIDDYNTAIKINPQYANAYLMRGDVYSDQKQWDKAIDDYNTAIKI 779

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N +   A+  RG       +  +AI D + A++  P  A     RG+V  + K ++ A++
Sbjct: 780 NSNNAWAYSARGLVYYKQKQWNKAIDDYNTAIKINPGDAFAYSARGLVYKEQKQWDKAID 839

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  +K++ +   AY+  G       ++ KA +    AI+++ N    +      Y + 
Sbjct: 840 DYTTAIKINPQYADAYSLRGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRGLVYVNQ 899

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              +KA++     + I+   + AY +RGL+     Q  KAI D  S + I+P +      
Sbjct: 900 KQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDDFKSAIKINPGDASAYLS 959

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           R   Y    ++ +AI D+ +A+ +  +         LA+Y +
Sbjct: 960 RGEVYSYQKQWDKAIDDFKSAIKINPND-------ALAYYNR 994



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 1/268 (0%)

Query: 382  DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
            D+ L RG+  VN+ ++  AI  F   +K +P    A   RG     Q++ + AI DF  A
Sbjct: 888  DYSL-RGLVYVNQKQWDKAIDDFTTAIKINPHDAGAYSVRGLVYQEQKQWDKAIDDFKSA 946

Query: 442  IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
            I+ NP    A+  RG+  +   +  +AI D   A++  PN A   + RG V    K ++ 
Sbjct: 947  IKINPGDASAYLSRGEVYSYQKQWDKAIDDFKSAIKINPNDALAYYNRGNVYVNQKQWDL 1006

Query: 502  AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            A+ D ++ +K++ +   AY   G+  S+  +++ A     +AI+++  F EA+ +    Y
Sbjct: 1007 AINDYNSAIKINPQYAEAYYNRGIVYSNQKKWELALADWNQAIKINPKFAEAYFNRGFVY 1066

Query: 562  QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
                N   AL   +Q L I++    A    G + + +G+ + AI+     + +D    E 
Sbjct: 1067 HTQENYSAALSDYKQALSINENLIAAISNIGFINYEMGETEAAIQQWQKVVKVDSQQAEP 1126

Query: 622  LYLRASCYHAIGEYREAIKDYDAALDLE 649
                A   +  GE  + ++    AL L+
Sbjct: 1127 QLALAVAMYTKGESDKGVQLAAQALKLD 1154



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 139/322 (43%), Gaps = 14/322 (4%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG     + ++  AI  F   +K +P        RG     Q++ + AI DFT AI+ NP
Sbjct: 858  RGRVHDQQKQWDKAIDDFTTAIKINPNNANDYSLRGLVYVNQKQWDKAIDDFTTAIKINP 917

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                A+  RG       +  +AI D   A++  P  A     RG V    K ++ A++D 
Sbjct: 918  HDAGAYSVRGLVYQEQKQWDKAIDDFKSAIKINPGDASAYLSRGEVYSYQKQWDKAIDDF 977

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
             + +K++  +  AY   G    +  ++  A   +  AI+++  + EA+ +    Y +   
Sbjct: 978  KSAIKINPNDALAYYNRGNVYVNQKQWDLAINDYNSAIKINPQYAEAYYNRGIVYSNQKK 1037

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             E AL    Q + I+ +F++AY  RG + H    +  A+ D    L I+ + I  +    
Sbjct: 1038 WELALADWNQAIKINPKFAEAYFNRGFVYHTQENYSAALSDYKQALSINENLIAAISNIG 1097

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK-------EIALYTASKINSE 679
               + +GE   AI+ +   + ++    E  +   +A Y K       ++A   A K++ +
Sbjct: 1098 FINYEMGETEAAIQQWQKVVKVDSQQAEPQLALAVAMYTKGESDKGVQLAA-QALKLDKQ 1156

Query: 680  FCWFDIDGDIDPLFKEYWCKRL 701
            F       D+  L +  W KR+
Sbjct: 1157 FA------DVAYLKQNLWGKRI 1172



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 120/274 (43%), Gaps = 1/274 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RG+    + KY+ A       + + P Y  AL  +       ++L+ A+    +AI   
Sbjct: 586 GRGLVLYAQKKYSEASVAISTAISKKPDYYPALKLQSQVLTQLKQLDEALVAIEKAIVIQ 645

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  +    + L    EAI  + K ++  P +A +   RG V    K ++ A+ D
Sbjct: 646 PQDPNLYFIKTSILSDLKRYPEAIATIQKGIDISPRAA-LYWIRGNVYVNQKQWDKAIND 704

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K++ +  +AY   G   S   ++ KA + +  AI+++  +  A+      Y D  
Sbjct: 705 YNTAIKINPQYANAYLMRGGVYSDQKQWDKAIDDYNTAIKINPQYANAYLMRGDVYSDQK 764

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             +KA++     + I+   + AY  RGL+ +   Q  KAI D ++ + I+P +      R
Sbjct: 765 QWDKAIDDYNTAIKINSNNAWAYSARGLVYYKQKQWNKAIDDYNTAIKINPGDAFAYSAR 824

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
              Y    ++ +AI DY  A+ +     + + L+
Sbjct: 825 GLVYKEQKQWDKAIDDYTTAIKINPQYADAYSLR 858



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 8/252 (3%)

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL-HERGIVNFKF 496
            T  +    +    W +RG     L    EAI     A++ +P    +  + RG+V +  
Sbjct: 535 LTVGVPQGNAKASVWLQRGNQLWRLRRYDEAIAAFDAAIKLQPAFVHLAWYGRGLVLYAQ 594

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           K ++ A   +S  +    +   A       L+ + +  +A  A  KAI +       +  
Sbjct: 595 KKYSEASVAISTAISKKPDYYPALKLQSQVLTQLKQLDEALVAIEKAIVIQPQDPNLYFI 654

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
            T    DL    +A+  +Q+ + I  R +  Y +RG +     Q  KAI D ++ + I+P
Sbjct: 655 KTSILSDLKRYPEAIATIQKGIDISPR-AALYWIRGNVYVNQKQWDKAINDYNTAIKINP 713

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
                  +R   Y    ++ +AI DY+ A+ +       ++++   +     + K I  Y
Sbjct: 714 QYANAYLMRGGVYSDQKQWDKAIDDYNTAIKINPQYANAYLMRGDVYSDQKQWDKAIDDY 773

Query: 672 -TASKINSEFCW 682
            TA KINS   W
Sbjct: 774 NTAIKINSNNAW 785



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 63/130 (48%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RGI   N+ K+  A++ ++Q +K +P + EA   RG     Q    AA+SD+ +A+  N
Sbjct: 1027 NRGIVYSNQKKWELALADWNQAIKINPKFAEAYFNRGFVYHTQENYSAALSDYKQALSIN 1086

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
             +   A    G     +GE+  AIQ   K ++ +   A+      +  +   + +  V+ 
Sbjct: 1087 ENLIAAISNIGFINYEMGETEAAIQQWQKVVKVDSQQAEPQLALAVAMYTKGESDKGVQL 1146

Query: 506  LSACVKLDKE 515
             +  +KLDK+
Sbjct: 1147 AAQALKLDKQ 1156


>gi|257062263|ref|YP_003142321.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
 gi|256592523|gb|ACV03373.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
          Length = 279

 Score =  111 bits (278), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 68/211 (32%), Positives = 114/211 (54%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y   I  + +I+++ P   EA   RG A A   +   AI DF ++I+ NP+  EA++ RG
Sbjct: 41  YDQVIIDYTEIIQDFPDCAEAYSDRGCAYAAIGDYTHAIQDFNKSIKLNPNYYEAYRGRG 100

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                  +  EAI+D  KA++ +P  A   H +GI   K  ++  A+E+    ++ + + 
Sbjct: 101 FVYGKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNPQY 160

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A+   G+A   + +Y++A     KAI+ + N++EA  +    Y+   NSEKA+E   Q
Sbjct: 161 AEAFNGRGIAYIQMEKYRQALNDFDKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEAFTQ 220

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
           V+ ID  + +AY  RG +   LG++KKAI+D
Sbjct: 221 VIQIDSDYLEAYIERGYVYGELGKYKKAIED 251



 Score =  110 bits (275), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 68/240 (28%), Positives = 121/240 (50%), Gaps = 2/240 (0%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           +  I D+TE IQ  P   EA+  RG A AA+G+   AIQD +K+++  PN  +    RG 
Sbjct: 42  DQVIIDYTEIIQDFPDCAEAYSDRGCAYAAIGDYTHAIQDFNKSIKLNPNYYEAYRGRGF 101

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V  K + +  A++D    +K+  +   A+   G+A + +G Y+KA E   KAIQ +  + 
Sbjct: 102 VYGKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNPQYA 161

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           EA+      Y  +    +AL    + +  +  + +A + +G+     G  +KAI+  +  
Sbjct: 162 EAFNGRGIAYIQMEKYRQALNDFDKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEAFTQV 221

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           + ID   +E    R   Y  +G+Y++AI+D + A +    S E ++  C+A ++    +Y
Sbjct: 222 IQIDSDYLEAYIERGYVYGELGKYKKAIEDCEKARNKNSKSQEAYL--CIAKFKNIKGIY 279



 Score =  101 bits (251), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 62/202 (30%), Positives = 101/202 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G Y  AI  F++ +K +P Y EA  GRG     Q + E AI DF +AI+  P
Sbjct: 65  RGCAYAAIGDYTHAIQDFNKSIKLNPNYYEAYRGRGFVYGKQEKYEEAIKDFEKAIKIKP 124

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  +G A   LG   +A+++  KA++  P  A+  + RGI   + + +  A+ D 
Sbjct: 125 KYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNPQYAEAFNGRGIAYIQMEKYRQALNDF 184

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +K +     A    G+A    G  +KA EA  + IQ+D ++LEA+      Y +L  
Sbjct: 185 DKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEAFTQVIQIDSDYLEAYIERGYVYGELGK 244

Query: 567 SEKALECLQQVLYIDKRFSKAY 588
            +KA+E  ++    + +  +AY
Sbjct: 245 YKKAIEDCEKARNKNSKSQEAY 266



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/174 (29%), Positives = 87/174 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG     + KY  AI  F++ +K  P Y +A  G+G A       E A+ +F +AIQ+NP
Sbjct: 99  RGFVYGKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQNNP 158

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EA+  RG A   + +  +A+ D  KA++F  N  + ++ +GI   +  +   A+E  
Sbjct: 159 QYAEAFNGRGIAYIQMEKYRQALNDFDKAIKFNSNYIEAIYNKGIAYKQQGNSEKAIEAF 218

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           +  +++D +   AY   G     +G+YKKA E   KA   +    EA+  + +F
Sbjct: 219 TQVIQIDSDYLEAYIERGYVYGELGKYKKAIEDCEKARNKNSKSQEAYLCIAKF 272



 Score = 41.6 bits (96), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 35/58 (60%)

Query: 75  RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
           R F Y + E ++  I+D +KA+++ P   QA+  +G A++ LG  E+AL  + K  ++
Sbjct: 99  RGFVYGKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAYTKLGNYEKALENFRKAIQN 156


>gi|209523829|ref|ZP_03272382.1| serine/threonine protein kinase with TPR repeats [Arthrospira
           maxima CS-328]
 gi|209495861|gb|EDZ96163.1| serine/threonine protein kinase with TPR repeats [Arthrospira
           maxima CS-328]
          Length = 754

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 13/284 (4%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T+  K    + D   +R +A      + +AI+  +Q+++ +P   +A   RG A   Q  
Sbjct: 423 TQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQEN 482

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            EAAI D+TE I+  P+  EA++ RG A    G     + D ++A+   P SA   + RG
Sbjct: 483 YEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAAAYYNRG 542

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
              F   D+  A+ D +  +  + +N  AY     TY+ L     G Y+ A E+  ++IQ
Sbjct: 543 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 597

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
           L+   ++ + +    + ++ N + A+    + + ++   SKA+  RG L+H L + ++ A
Sbjct: 598 LNPTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAEDYEAA 655

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           I D S  + ++P++ E    RA  +  +G Y EAI DY  A+ +
Sbjct: 656 IADYSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAIRI 699



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 131/275 (47%), Gaps = 1/275 (0%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA            +F  + + DP+  EA + RG  R    + EAAI  FT +IQ  P 
Sbjct: 338 GIAATGLVGLIVIFGLFQVLSRPDPVKSEAALKRGVERLEAGDPEAAIKAFTRSIQLFPD 397

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA+++R  A   L +  +AI D ++A++ +P + DI   R +   + +DF  A+ DL+
Sbjct: 398 NSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLN 457

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+ E+  A+   GLA  S   Y+ A   + + I+   N  EA+      +    N 
Sbjct: 458 QVIRLNPEDTDAFYQRGLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNL 517

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +  +    + + ++   + AY+ RG     LG ++ A+ D +  +  +P N E    R S
Sbjct: 518 QAGMADYTEAIRLNPESAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCS 577

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            Y  +G Y  AI+    ++ L   +M+ +  +C+A
Sbjct: 578 TYINLGNYEAAIESCSRSIQLNPTAMD-YNNRCIA 611



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  AI+ + Q +K DP  P+    R  A    R+   AI+D  + I+ NP   +A+ +R
Sbjct: 414 KYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQR 473

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A  +      AI D ++ +  +PN+++    RG  + K  +  A + D +  ++L+ E
Sbjct: 474 GLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPE 533

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           + +AY   G A   +G+Y+ A   + + I  + +  EA+G+    Y +L N E A+E   
Sbjct: 534 SAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCS 593

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + ++   +  Y+ R +    +  +  AI D +  + ++P+N +    R   +    +Y
Sbjct: 594 RSIQLNPT-AMDYNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDY 652

Query: 636 REAIKDYDAALDLELDSMEKF 656
             AI DY  A+ L  +  E +
Sbjct: 653 EAAIADYSQAISLNPNDAESY 673



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 66/127 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R IA +N   Y +AI    + ++ +P   +A   RG   +   + EAAI+D+++AI  N
Sbjct: 607 NRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIADYSQAISLN 666

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  E++  R QA A LG   EAI D ++A+   PN A   + RG+V     D   A+ D
Sbjct: 667 PNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 726

Query: 506 LSACVKL 512
                KL
Sbjct: 727 FEQAGKL 733



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ + G Y  A++ ++Q++  +P   EA   R +        EAAI   + +IQ N
Sbjct: 540 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 599

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+A + +  R  A   +     AI D +KA+E EPN++     RG+V+   +D+ AA+ D
Sbjct: 600 PTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAEDYEAAIAD 658

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            S  + L+  +  +Y+    A + +G Y +A   + +AI++  N   A+
Sbjct: 659 YSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAF 707



 Score = 47.8 bits (112), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 1/145 (0%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           +N G Y +AI    + ++ +P   +    R  A    +  +AAI D T+AI+  P+  +A
Sbjct: 580 INLGNYEAAIESCSRSIQLNPTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKA 638

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
              RG   +   +   AI D S+A+   PN A+    R   + +  +++ A+ D +  ++
Sbjct: 639 HSNRGLVHSLAEDYEAAIADYSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAIR 698

Query: 512 LDKENKSAYTYLGLALSSIGEYKKA 536
           +      A+   G+  +S+G+ + A
Sbjct: 699 IRPNLAGAFYGRGMVRASLGDRRGA 723



 Score = 46.2 bits (108), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 53/103 (51%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + E A++   + + +    S+A+  R    + L ++++AI D +  + +DP+N +  + 
Sbjct: 379 GDPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 438

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           R+  YH + ++  AI D +  + L  +  + F  + LA Y +E
Sbjct: 439 RSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQE 481



 Score = 40.0 bits (92), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 40/75 (53%)

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RG+     G  + AIK  +  + + P N E    RA+ Y+ + +Y +AI DY  A+ L+ 
Sbjct: 371 RGVERLEAGDPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDP 430

Query: 651 DSMEKFVLQCLAFYQ 665
            + + +  + LA++Q
Sbjct: 431 TNPDIYFNRSLAYHQ 445


>gi|376005368|ref|ZP_09782882.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
 gi|423065278|ref|ZP_17054068.1| serine/threonine protein kinase with TPR repeat protein
           [Arthrospira platensis C1]
 gi|375326295|emb|CCE18635.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
 gi|406713188|gb|EKD08360.1| serine/threonine protein kinase with TPR repeat protein
           [Arthrospira platensis C1]
          Length = 754

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 141/284 (49%), Gaps = 13/284 (4%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T+  K    + D   +R +A      + +AI+  +Q+++ +P   +A   RG A   Q  
Sbjct: 423 TQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQEN 482

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            EAAI D+TE I+  P+  EA++ RG A    G     + D ++A+   P SA   + RG
Sbjct: 483 YEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPESAAAYYNRG 542

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY-----TYLGLALSSIGEYKKAEEAHLKAIQ 545
              F   D+  A+ D +  +  + +N  AY     TY+ L     G Y+ A E+  ++IQ
Sbjct: 543 RARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINL-----GNYEAAIESCSRSIQ 597

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKA 604
           L+   ++ + +    + ++ N + A+    + + ++   SKA+  RG L+H L + ++ A
Sbjct: 598 LNPTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRG-LVHSLAENYEAA 655

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           I D S  + ++P++ E    RA  +  +G Y EAI DY  A+ +
Sbjct: 656 IADYSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAIRI 699



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 131/275 (47%), Gaps = 1/275 (0%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA            +F  + + DP+  EA + RG  R    + EAAI  FT +IQ  P 
Sbjct: 338 GIAATGLVGLIVIFGLFQVLSRPDPVKSEAALKRGVERLEAGDPEAAIKAFTRSIQLFPD 397

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA+++R  A   L +  +AI D ++A++ +P + DI   R +   + +DF  A+ DL+
Sbjct: 398 NSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLN 457

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+ E+  A+   GLA  S   Y+ A   + + I+   N  EA+      +    N 
Sbjct: 458 QVIRLNPEDTDAFYQRGLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNL 517

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +  +    + + ++   + AY+ RG     LG ++ A+ D +  +  +P N E    R S
Sbjct: 518 QAGMADYTEAIRLNPESAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCS 577

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            Y  +G Y  AI+    ++ L   +M+ +  +C+A
Sbjct: 578 TYINLGNYEAAIESCSRSIQLNPTAMD-YNNRCIA 611



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 125/261 (47%), Gaps = 1/261 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  AI+ + Q +K DP  P+    R  A    R+   AI+D  + I+ NP   +A+ +R
Sbjct: 414 KYEQAIADYTQAIKLDPTNPDIYFNRSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQR 473

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A  +      AI D ++ +  +PN+++    RG  + K  +  A + D +  ++L+ E
Sbjct: 474 GLAHYSQENYEAAILDYTEVIRRQPNNSEAYRARGSAHVKSGNLQAGMADYTEAIRLNPE 533

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           + +AY   G A   +G+Y+ A   + + I  + +  EA+G+    Y +L N E A+E   
Sbjct: 534 SAAAYYNRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCS 593

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + ++   +  Y+ R +    +  +  AI D +  + ++P+N +    R   +     Y
Sbjct: 594 RSIQLNPT-AMDYNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAENY 652

Query: 636 REAIKDYDAALDLELDSMEKF 656
             AI DY  A+ L  +  E +
Sbjct: 653 EAAIADYSQAISLNPNDAESY 673



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 65/127 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R IA +N   Y +AI    + ++ +P   +A   RG   +     EAAI+D+++AI  N
Sbjct: 607 NRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAENYEAAIADYSQAISLN 666

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  E++  R QA A LG   EAI D ++A+   PN A   + RG+V     D   A+ D
Sbjct: 667 PNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAFYGRGMVRASLGDRRGAISD 726

Query: 506 LSACVKL 512
                KL
Sbjct: 727 FEQAGKL 733



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 1/169 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ + G Y  A++ ++Q++  +P   EA   R +        EAAI   + +IQ N
Sbjct: 540 NRGRARFHLGDYQGALADYNQVISWEPDNAEAYGNRCSTYINLGNYEAAIESCSRSIQLN 599

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+A + +  R  A   +     AI D +KA+E EPN++     RG+V+   +++ AA+ D
Sbjct: 600 PTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKAHSNRGLVHSLAENYEAAIAD 658

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            S  + L+  +  +Y+    A + +G Y +A   + +AI++  N   A+
Sbjct: 659 YSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAIRIRPNLAGAF 707



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 3/146 (2%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           +N G Y +AI    + ++ +P   +    R  A    +  +AAI D T+AI+  P+  +A
Sbjct: 580 INLGNYEAAIESCSRSIQLNPTAMD-YNNRCIAHLNVQNYDAAIGDCTKAIELEPNNSKA 638

Query: 452 WKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
              RG    +L E+ E AI D S+A+   PN A+    R   + +  +++ A+ D +  +
Sbjct: 639 HSNRGLVH-SLAENYEAAIADYSQAISLNPNDAESYSNRAQAHAELGNYSEAIADYAQAI 697

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKA 536
           ++      A+   G+  +S+G+ + A
Sbjct: 698 RIRPNLAGAFYGRGMVRASLGDRRGA 723



 Score = 46.2 bits (108), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 53/103 (51%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + E A++   + + +    S+A+  R    + L ++++AI D +  + +DP+N +  + 
Sbjct: 379 GDPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDPTNPDIYFN 438

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           R+  YH + ++  AI D +  + L  +  + F  + LA Y +E
Sbjct: 439 RSLAYHQMRDFGNAINDLNQVIRLNPEDTDAFYQRGLAHYSQE 481



 Score = 40.0 bits (92), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 40/75 (53%)

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RG+     G  + AIK  +  + + P N E    RA+ Y+ + +Y +AI DY  A+ L+ 
Sbjct: 371 RGVERLEAGDPEAAIKAFTRSIQLFPDNSEAFRKRANAYYDLQKYEQAIADYTQAIKLDP 430

Query: 651 DSMEKFVLQCLAFYQ 665
            + + +  + LA++Q
Sbjct: 431 TNPDIYFNRSLAYHQ 445


>gi|154150715|ref|YP_001404333.1| hypothetical protein Mboo_1172 [Methanoregula boonei 6A8]
 gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
          Length = 4079

 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 137/300 (45%), Gaps = 11/300 (3%)

Query: 400  AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA--WKRRGQ 457
            A++ +DQ L  +P Y EA+  +G      +  + AI  F  A++ NPS  +A  WK R  
Sbjct: 3765 ALAAYDQALSANPGYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWKARTL 3824

Query: 458  ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
                 G    AI +  +A+  +P+  ++  +RG+       +  A++     ++LD    
Sbjct: 3825 YDE--GSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKALELDTHGA 3882

Query: 518  SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
             A+++ G +L+ +G Y+ A EA  KAI+ D     +W        DL    +A     + 
Sbjct: 3883 DAFSHKGSSLAELGMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEG 3942

Query: 578  LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
            L  D   +  +  RG+ L GL  HK AI+     L IDPS     + R S + A+G++ E
Sbjct: 3943 LRRDPENAVGWTRRGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEE 4002

Query: 638  AIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYW 697
            A   + A + L+ D ++ ++ Q  A  ++E       K       F    +IDP  KE W
Sbjct: 4003 AEASFRAMISLQPDFVDAWIHQGRALQEQE-------KYQEALTSFKRALEIDPSRKEIW 4055



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 131/270 (48%)

Query: 384  RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
            R+ +GI+  N G+YA AI  FD+ + E+P    A   +G A         AI  +  A++
Sbjct: 1335 RMRKGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAYDRALE 1394

Query: 444  SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
               S  EA   +G A   LG   EA+    +ALE  P+    L  RG    K + +  AV
Sbjct: 1395 VESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRGAALMKLERYREAV 1454

Query: 504  EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +   A + L  +   A+   G++L++ G Y+ +  A+ +A++ D    E+  +      +
Sbjct: 1455 QAFDAALLLLPKYAPAHHLKGVSLAAQGLYQDSIYAYDRALECDPGSGESALNKAMSLHN 1514

Query: 564  LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            L   E AL    + + I   F++A+  RGL+L  LG+++++++ L   L  DP N    Y
Sbjct: 1515 LGQDEDALAAAVKAIEIQPDFAEAWRYRGLILSNLGRYQESVEALDHALAGDPKNARVNY 1574

Query: 624  LRASCYHAIGEYREAIKDYDAALDLELDSM 653
             +   +  +G+Y  AI  YDAAL  + D +
Sbjct: 1575 QKGRAFDGLGQYENAISAYDAALQAQPDCI 1604



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 154/327 (47%), Gaps = 39/327 (11%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            + +GIA V  GK+  AI+  ++ L++ P    A   +G + A  +  E A+  F   ++ 
Sbjct: 690  IHKGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMSLAALQRFEEAVRSFERVLEI 749

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            N     A+ ++G A A LG+ +EAI    +ALE +P++   L+++GI   + + ++ A++
Sbjct: 750  NRRCSPAFFQKGNALAHLGKQLEAIISYDQALEIDPDNPVTLYQKGIALAQRERYDDAIK 809

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD----------------- 547
                 + L+ EN  A  YLG+A +    + +A  A  +++++D                 
Sbjct: 810  TFERLLTLEPENAQALYYLGIAYAGRQRFDEAIVAFERSLEIDPKNPLAHHYMGVSLVEC 869

Query: 548  -------RNF-----LEAWGHLTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHL 590
                   R+F     L+A    T +YQ +A       E+A+  L   + +D   S A+  
Sbjct: 870  DRYDDALRSFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAALNTAIRMDTSLSDAFTY 929

Query: 591  RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
             G+ L  LG+H +A+  L+  L  +PS +E L  R      +  Y +A++ +D  L L  
Sbjct: 930  LGISLARLGRHDEAVAALNRSLAANPSQMEALVCRGESLMVLQRYADAVETFDRILSLNP 989

Query: 651  DSMEKFV-----LQCLAFYQKEIALYT 672
            + +  ++     L+ L   Q  +A+YT
Sbjct: 990  NVISAWMQKGAALERLVKKQDALAVYT 1016



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 156/366 (42%), Gaps = 15/366 (4%)

Query: 335  DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNE 394
            D   SD+  ++ K      M +E        K F  T + +     V F   +G+A    
Sbjct: 3266 DPVFSDALFAKGKALLTLGMFREAV------KTFDKTLLIEKNYAGVYFH--KGLALAEL 3317

Query: 395  GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
            G++  AI+ FD+ +  D    +A   +G + A   +L  A+  F   IQ++P + + W  
Sbjct: 3318 GRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLH 3377

Query: 455  RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            RG A   LG   +AI    KALE  P +AD  +  G   +    ++ A+      + L  
Sbjct: 3378 RGMALFDLGRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNTYDEAIAAFDRALDLQG 3437

Query: 515  ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            E   A+ Y G  L ++G+Y +A  A+   + L     EA+ H       L  +  A+   
Sbjct: 3438 EFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEAFYHKGMALLKLQRAGDAVSAF 3497

Query: 575  QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
             Q L +   FS  +  +G+ L  L +HK AI   +  + +D  +    Y     Y ++G 
Sbjct: 3498 DQALRLRPNFSYIWTGKGMALAALDRHKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGR 3557

Query: 635  YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFK 694
            Y++AI++++A L ++  S  +      AFY K  AL   S  +     FD        + 
Sbjct: 3558 YQDAIRNFEATL-VQHPSCAR------AFYAKGRALCGVSMFHEAITSFDKALSEQSDYP 3610

Query: 695  EYWCKR 700
            E W  R
Sbjct: 3611 EAWLYR 3616



 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 135/278 (48%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            ++G A      +  AI+ FD+ L E   YPEA + RG A A   E E A+  +  A+  N
Sbjct: 3581 AKGRALCGVSMFHEAITSFDKALSEQSDYPEAWLYRGIAEANLEEFEEALDCYNHALAQN 3640

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
             S   A   +G+A   L  + EA+  + K L  +P SAD  + +G  +   +  + A++ 
Sbjct: 3641 ESYATALLNKGRALIHLERTGEALAAIEKVLTIQPESADAFYYKGRAHLNRRQDDDAIDA 3700

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  + ++++   A+ Y G AL+  G+Y++A  A   A+++  ++ EA+    +    L 
Sbjct: 3701 FNRALAINRQFAEAHYYKGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLE 3760

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             S++AL    Q L  +  +++A   +G     L     AI+     L ++PS  +  Y +
Sbjct: 3761 RSKEALAAYDQALSANPGYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWK 3820

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            A   +  G Y  AI +YD A+ ++ D  E +  + LA+
Sbjct: 3821 ARTLYDEGSYDAAITEYDRAIAIKPDRPELYRDRGLAY 3858



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 7/288 (2%)

Query: 397  YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
            Y  AI+ FD +L   P + +AL  +  A     +   A++ ++ A+   PS  +    RG
Sbjct: 3184 YDEAIAAFDHVLNLVPEHFDALFQKARALDDLGKYSEAVTSYSAALALKPSDAKTHYYRG 3243

Query: 457  QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
             + A  G+  EA++    ALE +P  +D L  +G        F  AV+     + ++K  
Sbjct: 3244 VSLAENGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTFDKTLLIEKNY 3303

Query: 517  KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
               Y + GLAL+ +G + +A  A  K I LD    +A+ H             A+E    
Sbjct: 3304 AGVYFHKGLALAELGRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAFDH 3363

Query: 577  VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            V+  D    + +  RG+ L  LG+   AI      L I P+N +  YL    Y+A+  Y 
Sbjct: 3364 VIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNTYD 3423

Query: 637  EAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
            EAI  +D ALDL+ +  E       A+Y K   L+   K       +D
Sbjct: 3424 EAIAAFDRALDLQGEFAE-------AWYYKGRTLFAMGKYGEAVSAYD 3464



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 137/303 (45%), Gaps = 14/303 (4%)

Query: 375  KSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR-- 429
            K+  I  DF  +   RG+   N G+Y  ++   D  L  DP    A +     RAF    
Sbjct: 1527 KAIEIQPDFAEAWRYRGLILSNLGRYQESVEALDHALAGDP--KNARVNYQKGRAFDGLG 1584

Query: 430  ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
            + E AIS +  A+Q+ P    A   +G+A   +    +A ++  K L   P++A+   + 
Sbjct: 1585 QYENAISAYDAALQAQPDCIPARMHKGEALLFISRFRDATKEFGKILTEHPDNAEAWIKM 1644

Query: 490  GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
                F   D+   +E     ++ + ++  A  Y GLA   +G Y++A E+  +A Q+D +
Sbjct: 1645 ARARFSLGDYTEVIEACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAEQIDSH 1704

Query: 550  FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
              +A  HL      L     A+    +VL +    + A+HLRG+ L   G + +AI    
Sbjct: 1705 LEQAVYHLGAALLKLERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFE 1764

Query: 610  SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
            + L  DP + E    +A   H++G   E+I   D AL ++ D  E       A+Y K +A
Sbjct: 1765 NALRYDPRSAESALNKAIALHSLGRDEESILASDIALGIQPDFAE-------AWYYKGVA 1817

Query: 670  LYT 672
            L T
Sbjct: 1818 LET 1820



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 134/289 (46%), Gaps = 7/289 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A  + G+Y+ A++ +D+ LK  P YP+A+  +G A A     E A+ +F  A+  NP 
Sbjct: 421 GLASASLGRYSDAVAAYDRALKIRPDYPDAVYHKGFALAKLGNSEDALLEFDRALTENPG 480

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+ ++GQ     G   EA++ L+K++  +P++A + +++G    K + F  A+E   
Sbjct: 481 NAPAYHQKGQLLVRTGRLEEALEALNKSIALKPDNAQVYYDKGSALLKAERFGPALEAFD 540

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + +     +AY   G+A S  G  K+A EA   AI +D     A  H       L   
Sbjct: 541 QAIGIYPNYVNAYYNKGIAFSRTGMRKEALEAFDHAIAIDPTHTLALYHRGTMLSGLGRY 600

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
             A      VL +  + + A + +G+ L  L + K A +     +  DP  I+      +
Sbjct: 601 ADAAAAYDAVLALSPQNTSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAWLAFGT 660

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKI 676
           C   +G++ +AI  +D  + L   + + F+        K IAL T  K 
Sbjct: 661 CNANLGKFPDAIAAFDRVIALSPKNTQAFI-------HKGIALVTTGKF 702



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 129/276 (46%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G++    GK  +A+  FD +++ DP   +  + RG A         AIS + +A++  P
Sbjct: 3344 KGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKALEIGP 3403

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            +  +AW   G++  AL    EAI    +AL+ +   A+  + +G   F    +  AV   
Sbjct: 3404 TNADAWYLVGRSYYALNTYDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAY 3463

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
             + + L  ++  A+ + G+AL  +     A  A  +A++L  NF   W         L  
Sbjct: 3464 DSTLVLRPKHDEAFYHKGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTGKGMALAALDR 3523

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             + A+ C  + + +D++ S+AY+  GL    LG+++ AI++  + L   PS     Y + 
Sbjct: 3524 HKDAISCYTKAIALDRKDSRAYYQAGLSYLSLGRYQDAIRNFEATLVQHPSCARAFYAKG 3583

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
                 +  + EAI  +D AL  + D  E ++ + +A
Sbjct: 3584 RALCGVSMFHEAITSFDKALSEQSDYPEAWLYRGIA 3619



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 129/306 (42%), Gaps = 7/306 (2%)

Query: 395  GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
            GKY+ A++ +   L   P   +    RG + A   + E A+  F  A++ +P   +A   
Sbjct: 3216 GKYSEAVTSYSAALALKPSDAKTHYYRGVSLAENGQPEEAVKAFDAALEIDPVFSDALFA 3275

Query: 455  RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            +G+A   LG   EA++   K L  E N A +   +G+   +    + A+      + LD 
Sbjct: 3276 KGKALLTLGMFREAVKTFDKTLLIEKNYAGVYFHKGLALAELGRHDEAITAFDKDIDLDA 3335

Query: 515  ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
             N  A+ + G++L++ G+   A EA    IQ D   ++ W H      DL     A+   
Sbjct: 3336 GNNDAFYHKGVSLAATGKLTNAMEAFDHVIQADPGSVQGWLHRGMALFDLGRFNDAISSY 3395

Query: 575  QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            ++ L I    + A++L G   + L  + +AI      L +     E  Y +     A+G+
Sbjct: 3396 KKALEIGPTNADAWYLVGRSYYALNTYDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGK 3455

Query: 635  YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFK 694
            Y EA+  YD+ L L     E       AFY K +AL    +       FD    + P F 
Sbjct: 3456 YGEAVSAYDSTLVLRPKHDE-------AFYHKGMALLKLQRAGDAVSAFDQALRLRPNFS 3508

Query: 695  EYWCKR 700
              W  +
Sbjct: 3509 YIWTGK 3514



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 137/309 (44%), Gaps = 34/309 (11%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEAL---------IGR----------------- 421
            G+A     +Y+ A+S FD++L+  P   EAL         +GR                 
Sbjct: 2461 GLAYAALSRYSPALSAFDKLLESGPQNAEALFQKGRMLAKLGRPDEALAVLETSLGLENN 2520

Query: 422  --------GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
                    G+    Q  LE A+  F  A+   P    AW R+G+A + L    EAIQ   
Sbjct: 2521 IADVWLLKGSVLLEQERLEDALEVFDRALALTPENNAAWYRKGKAFSGLHRYPEAIQCFD 2580

Query: 474  KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
            + +  +   A     +G       D  AA+E L+  ++L  +N + +    +AL+ +G Y
Sbjct: 2581 RVVTSDTGCAQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVALAGLGRY 2640

Query: 534  KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
            +++  ++ +A+ L+  +  A+         L    +A+E  +    ID  F+ AY  +GL
Sbjct: 2641 EESIPSYDRALSLNPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAIDPEFAVAYLEKGL 2700

Query: 594  LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
             L  L ++K+A+    + L +DP+N+  L+ +      + ++ +AI  +DAAL ++    
Sbjct: 2701 ALARLSKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFADAITVFDAALRIDAKHY 2760

Query: 654  EKFVLQCLA 662
            E +  +  A
Sbjct: 2761 EAWFAKGYA 2769



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 123/263 (46%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            ++G   ++ GKY  A++ FDQ L+ +P Y E    RG A +       AI  F   ++ +
Sbjct: 1201 NKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVALSKLGRFPEAIEAFERNLEKD 1260

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
             S    +  +G A + LG   EA+    +AL ++P +A +  ++G        F  AV  
Sbjct: 1261 TSNAPGYYFKGIALSKLGRYQEALDAFDRALVYDPENALVYFQKGRALDGLNRFQEAVAA 1320

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                + L      A    G++L ++G Y  A     + I  + +   AW    +   D  
Sbjct: 1321 FEKTLALKPRYSEARMRKGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSG 1380

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +  +A++   + L ++  + +A++ +GL L+ LG++++A+      L  +P     L+ R
Sbjct: 1381 SYTEAIDAYDRALEVESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHR 1440

Query: 626  ASCYHAIGEYREAIKDYDAALDL 648
             +    +  YREA++ +DAAL L
Sbjct: 1441 GAALMKLERYREAVQAFDAALLL 1463



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 123/298 (41%), Gaps = 43/298 (14%)

Query: 388  GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            G+A    G+   A++ F+  LK  D   P                               
Sbjct: 1169 GLALAGSGRPKDALAAFESALKIRDTFAP------------------------------- 1197

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                AW  +G+    LG+  EA+    +ALE EP   ++ + RG+   K   F  A+E  
Sbjct: 1198 ----AWYNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSRGVALSKLGRFPEAIEAF 1253

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               ++ D  N   Y + G+ALS +G Y++A +A  +A+  D      +    +    L  
Sbjct: 1254 ERNLEKDTSNAPGYYFKGIALSKLGRYQEALDAFDRALVYDPENALVYFQKGRALDGLNR 1313

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             ++A+   ++ L +  R+S+A   +G+ L+ LG++  AI+D    +  +P N    Y + 
Sbjct: 1314 FQEAVAAFEKTLALKPRYSEARMRKGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKG 1373

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
                  G Y EAI  YD AL++E    E       A Y K +ALY   +       +D
Sbjct: 1374 RALFDSGSYTEAIDAYDRALEVESSYPE-------AHYHKGLALYELGRYEEALLSYD 1424



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 7/284 (2%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG + +   +YA A+  FD+IL  +P    A + +G A     + + A++ +T  ++ NP
Sbjct: 964  RGESLMVLQRYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTRVLEINP 1023

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               +AW R+G     LG + EA+   SKAL+       I   +G         + A E  
Sbjct: 1024 GNADAWARKGVLLQDLGRTAEAVTAFSKALDINAGIGGIWMHKGDALSTLGKTSEAAEAY 1083

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            +  +KLD + +  +   G AL  +G Y+ A +A   AI L++    A+ +     + +  
Sbjct: 1084 AEALKLDPDQEEGWIKGGRALFDLGRYQDAIDAFDNAIALNQRSTVAFLYKGFSLEKINR 1143

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + +AL+  + +L ID   S+A++  GL L G G+ K A+    S L I  +     Y + 
Sbjct: 1144 AGEALQVFEVLLEIDPHNSEAHYHMGLALAGSGRPKDALAAFESALKIRDTFAPAWYNKG 1203

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
                 +G+Y+EA+  +D AL+ E    E        FY + +AL
Sbjct: 1204 KMLLDLGKYQEALAAFDQALEREPAYTE-------VFYSRGVAL 1240



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 17/321 (5%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            L RG A     +   A++ FDQ+L  +P  P A   RG A  +  + E A+      + S
Sbjct: 3070 LERGRALAALNRNDEAVASFDQVLALEPADPVASFERGRALYYAAKYEHAVEALDTTLSS 3129

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            +P    A   R  + AAL    EA +   + L + P +AD  +E+G V  + + ++ A+ 
Sbjct: 3130 DPRHPGALYFRAASLAALERYAEAAESFERLLVYTPENADAWYEQGCVLARLRHYDEAIA 3189

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                 + L  E+  A      AL  +G+Y +A  ++  A+ L  +  +     T +Y+ +
Sbjct: 3190 AFDHVLNLVPEHFDALFQKARALDDLGKYSEAVTSYSAALALKPSDAK-----THYYRGV 3244

Query: 565  -----ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
                    E+A++     L ID  FS A   +G  L  LG  ++A+K     L I+ +  
Sbjct: 3245 SLAENGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTFDKTLLIEKNYA 3304

Query: 620  ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSE 679
               + +      +G + EAI  +D  +DL+  + +       AFY K ++L    K+ + 
Sbjct: 3305 GVYFHKGLALAELGRHDEAITAFDKDIDLDAGNND-------AFYHKGVSLAATGKLTNA 3357

Query: 680  FCWFDIDGDIDPLFKEYWCKR 700
               FD     DP   + W  R
Sbjct: 3358 MEAFDHVIQADPGSVQGWLHR 3378



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 152/345 (44%), Gaps = 41/345 (11%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            + +G A     K   A++++ ++L+ +P   +A   +G           A++ F++A+  
Sbjct: 996  MQKGAALERLVKKQDALAVYTRVLEINPGNADAWARKGVLLQDLGRTAEAVTAFSKALDI 1055

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP------------------------ 480
            N   G  W  +G A + LG++ EA +  ++AL+ +P                        
Sbjct: 1056 NAGIGGIWMHKGDALSTLGKTSEAAEAYAEALKLDPDQEEGWIKGGRALFDLGRYQDAID 1115

Query: 481  --NSADILHERGIVNFKFKDFNA--------AVEDLSACVKLDKENKSAYTYLGLALSSI 530
              ++A  L++R  V F +K F+         A++     +++D  N  A+ ++GLAL+  
Sbjct: 1116 AFDNAIALNQRSTVAFLYKGFSLEKINRAGEALQVFEVLLEIDPHNSEAHYHMGLALAGS 1175

Query: 531  GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
            G  K A  A   A+++   F  AW +  +   DL   ++AL    Q L  +  +++ ++ 
Sbjct: 1176 GRPKDALAAFESALKIRDTFAPAWYNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYS 1235

Query: 591  RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            RG+ L  LG+  +AI+     L  D SN    Y +      +G Y+EA+  +D AL  + 
Sbjct: 1236 RGVALSKLGRFPEAIEAFERNLEKDTSNAPGYYFKGIALSKLGRYQEALDAFDRALVYDP 1295

Query: 651  DSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
            ++        L ++QK  AL   ++       F+    + P + E
Sbjct: 1296 EN-------ALVYFQKGRALDGLNRFQEAVAAFEKTLALKPRYSE 1333



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 119/262 (45%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG++    G+   A+  FD  L+ DP++ +AL  +G A         A+  F + +    
Sbjct: 3242 RGVSLAENGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTFDKTLLIEK 3301

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            +    +  +G A A LG   EAI    K ++ +  + D  + +G+          A+E  
Sbjct: 3302 NYAGVYFHKGLALAELGRHDEAITAFDKDIDLDAGNNDAFYHKGVSLAATGKLTNAMEAF 3361

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               ++ D  +   + + G+AL  +G +  A  ++ KA+++     +AW  + + Y  L  
Sbjct: 3362 DHVIQADPGSVQGWLHRGMALFDLGRFNDAISSYKKALEIGPTNADAWYLVGRSYYALNT 3421

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             ++A+    + L +   F++A++ +G  L  +G++ +A+    S L + P + E  Y + 
Sbjct: 3422 YDEAIAAFDRALDLQGEFAEAWYYKGRTLFAMGKYGEAVSAYDSTLVLRPKHDEAFYHKG 3481

Query: 627  SCYHAIGEYREAIKDYDAALDL 648
                 +    +A+  +D AL L
Sbjct: 3482 MALLKLQRAGDAVSAFDQALRL 3503



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 122/265 (46%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            L +G+A     K   A++ FD  L  DP    AL  +G A A  ++   AI+ F  A++ 
Sbjct: 2696 LEKGLALARLSKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFADAITVFDAALRI 2755

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            +    EAW  +G A++ L    +A+     AL  +P    + +E+G+   +    + AV 
Sbjct: 2756 DAKHYEAWFAKGYAQSRLRHYDDAVGAFDHALAIDPGRYAVWYEKGVALARAGKNDEAVA 2815

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
              S  +  D +   A    G AL  +GE ++A  +  +A+ LD +F +A  +L    + +
Sbjct: 2816 AFSEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRALDLDTSFGDAAYYLGLALERV 2875

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
                 A+    +++      S A++ RG+    LG+   A++       I+P N+  L+ 
Sbjct: 2876 GKFTDAITAYDRMVAARPDHSDAWYHRGIASERLGRDNDAVQAYEKARQIEPHNLPLLFA 2935

Query: 625  RASCYHAIGEYREAIKDYDAALDLE 649
                +  +G++ +AI  +D AL  E
Sbjct: 2936 DGRAWARLGQFEDAIHLFDIALGKE 2960



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 148/345 (42%), Gaps = 41/345 (11%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D  + +GI+     +   A   FD+ +++DP+ P+A + +G +       E A     +
Sbjct: 244 ADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDMERYEDATYALDK 303

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A + +P   + +  RG+A   LG+  EA+ D  +AL  EP +AD L+ RG+       ++
Sbjct: 304 AAELSPQTTKIYYTRGKANQRLGKYREAVADFDRALAAEPENADALYSRGVSCIHLSRYD 363

Query: 501 AAV-------------------------------EDLSA---CVKLDKENKSAYTYLGLA 526
            ++                               E +SA    + +D    SA   +GLA
Sbjct: 364 ESLSVFDRILASQGDHAGASYFRGVVLSRLGRQDEAISAFEHTLAIDPGCASAAYQIGLA 423

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
            +S+G Y  A  A+ +A+++  ++ +A  H       L NSE AL    + L  +   + 
Sbjct: 424 SASLGRYSDAVAAYDRALKIRPDYPDAVYHKGFALAKLGNSEDALLEFDRALTENPGNAP 483

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AYH +G LL   G+ ++A++ L+  + + P N +  Y + S       +  A++ +D A+
Sbjct: 484 AYHQKGQLLVRTGRLEEALEALNKSIALKPDNAQVYYDKGSALLKAERFGPALEAFDQAI 543

Query: 647 DLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
            +  + +        A+Y K IA             FD    IDP
Sbjct: 544 GIYPNYVN-------AYYNKGIAFSRTGMRKEALEAFDHAIAIDP 581



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 133/338 (39%), Gaps = 41/338 (12%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG++ +   +Y  A   FD  L   P  PE    +G A       E A++ F  AI   P
Sbjct: 3004 RGLSLLALERYEDADMAFDAALSLSPDLPEIWEKKGGALMHAGNYEGAVAAFDHAISLLP 3063

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                A+  RG+A AAL  + EA+    + L  EP       ERG   +    +  AVE L
Sbjct: 3064 DDPGAYLERGRALAALNRNDEAVASFDQVLALEPADPVASFERGRALYYAAKYEHAVEAL 3123

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------------ 554
               +  D  +  A  +   +L+++  Y +A E+  + +       +AW            
Sbjct: 3124 DTTLSSDPRHPGALYFRAASLAALERYAEAAESFERLLVYTPENADAWYEQGCVLARLRH 3183

Query: 555  ----------------GHLTQFYQ------DLANSEKALECLQQVLYIDKRFSKAYHLRG 592
                             H    +Q      DL    +A+      L +    +K ++ RG
Sbjct: 3184 YDEAIAAFDHVLNLVPEHFDALFQKARALDDLGKYSEAVTSYSAALALKPSDAKTHYYRG 3243

Query: 593  LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
            + L   GQ ++A+K   + L IDP   + L+ +      +G +REA+K +D  L +E + 
Sbjct: 3244 VSLAENGQPEEAVKAFDAALEIDPVFSDALFAKGKALLTLGMFREAVKTFDKTLLIEKN- 3302

Query: 653  MEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDID 690
                      ++ K +AL    + +     FD D D+D
Sbjct: 3303 ------YAGVYFHKGLALAELGRHDEAITAFDKDIDLD 3334



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 125/307 (40%), Gaps = 41/307 (13%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G+A    GK   AI  F   L+ DP   +AL   G A A       A+S F + ++S P
Sbjct: 2426 KGLALFALGKNEKAIRSFTHALEHDPSLSDALFHTGLAYAALSRYSPALSAFDKLLESGP 2485

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               EA  ++G+  A LG   EA+  L  +L  E N AD+   +G V  + +    A+E  
Sbjct: 2486 QNAEALFQKGRMLAKLGRPDEALAVLETSLGLENNIADVWLLKGSVLLEQERLEDALEVF 2545

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               + L  EN +A+   G A S +  Y +A                              
Sbjct: 2546 DRALALTPENNAAWYRKGKAFSGLHRYPEA------------------------------ 2575

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
                ++C  +V+  D   ++A+  +G  L   G  + AI+ L+  L + P N    Y RA
Sbjct: 2576 ----IQCFDRVVTSDTGCAQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRA 2631

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
                 +G Y E+I  YD AL L      K+     A++ K  AL    +       F++ 
Sbjct: 2632 VALAGLGRYEESIPSYDRALSLN----PKY---TSAYFDKGSALSRLGRDRQAIEAFEMA 2684

Query: 687  GDIDPLF 693
              IDP F
Sbjct: 2685 SAIDPEF 2691



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 131/287 (45%), Gaps = 5/287 (1%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +GIA    G+Y  A+  FD+ L  DP        +G A       + A++ F + +   P
Sbjct: 1270 KGIALSKLGRYQEALDAFDRALVYDPENALVYFQKGRALDGLNRFQEAVAAFEKTLALKP 1329

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               EA  R+G +   LG   +AI+D  + +   P++    +++G   F    +  A++  
Sbjct: 1330 RYSEARMRKGISLYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAY 1389

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               ++++     A+ + GLAL  +G Y++A  ++ +A++ + +   A  H       L  
Sbjct: 1390 DRALEVESSYPEAHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRGAALMKLER 1449

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              +A++     L +  +++ A+HL+G+ L   G ++ +I      L  DP + E    +A
Sbjct: 1450 YREAVQAFDAALLLLPKYAPAHHLKGVSLAAQGLYQDSIYAYDRALECDPGSGESALNKA 1509

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEK-----FVLQCLAFYQKEI 668
               H +G+  +A+     A++++ D  E       +L  L  YQ+ +
Sbjct: 1510 MSLHNLGQDEDALAAAVKAIEIQPDFAEAWRYRGLILSNLGRYQESV 1556



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 131/618 (21%), Positives = 241/618 (38%), Gaps = 59/618 (9%)

Query: 46   LCSLRNWSKAIRILDSLLAQS-YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
            L +L  ++ AIR  D  +A++ +       +         +   I   D+AL+++ +  +
Sbjct: 1342 LYNLGRYADAIRDFDRTIAENPHNFHAWYQKGRALFDSGSYTEAIDAYDRALEVESSYPE 1401

Query: 105  AYILKGCAFSALGRKEEALSVWEKGYE------HAL-HQSADLKQFLELEELLTAAKQDR 157
            A+  KG A   LGR EEAL  +++  E      +AL H+ A L +     E + A     
Sbjct: 1402 AHYHKGLALYELGRYEEALLSYDQALESNPHLDYALFHRGAALMKLERYREAVQAFDAAL 1461

Query: 158  SVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHD 217
             +  +Y  ++ +  ++++  GL       ++   ++++  CD  S    +++  S     
Sbjct: 1462 LLLPKYAPAHHLKGVSLAAQGL-----YQDSIYAYDRALECDPGSGESALNKAMS----- 1511

Query: 218  PDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQS 277
              L N   DE     ++  +   + I     E          G   ++  R      ++S
Sbjct: 1512 --LHNLGQDE----DALAAAVKAIEIQPDFAEAWRYR-----GLILSNLGR-----YQES 1555

Query: 278  SDDFD-ICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLN---DSNTNSESYSKSSI 333
             +  D    G    A VN + GR  +G     + +S+  A+L    D         ++ +
Sbjct: 1556 VEALDHALAGDPKNARVNYQKGRAFDGLGQYENAISAYDAALQAQPDCIPARMHKGEALL 1615

Query: 334  SDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRIS---------------KSKS 378
              ++  D+T+   K+      L E  + A+   K    R S               +  +
Sbjct: 1616 FISRFRDATKEFGKI------LTEHPDNAEAWIKMARARFSLGDYTEVIEACDHALRFNA 1669

Query: 379  ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
             S +  L RG+AQ   G+Y  A+    +  + D    +A+   G A         AI  F
Sbjct: 1670 DSAEALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAVYHLGAALLKLERYGDAIPAF 1729

Query: 439  TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
               +   P    A   RG A AA G   EAI     AL ++P SA+    + I       
Sbjct: 1730 DRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFENALRYDPRSAESALNKAIALHSLGR 1789

Query: 499  FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
               ++      + +  +   A+ Y G+AL ++  Y  A  A  ++++LD     AW  + 
Sbjct: 1790 DEESILASDIALGIQPDFAEAWYYKGVALETLKRYADAVPAFSRSLELDSTTTHAWFEMG 1849

Query: 559  QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                +L   E+A      VL +   +  AY  +G  L  LG++++A+    S L I P +
Sbjct: 1850 LCLVELQRYEEAAGAFDHVLGLVSDYPPAYFHKGRALALLGKYEEAVVAFDSALAITPGD 1909

Query: 619  IECLYLRASCYHAIGEYR 636
               L  +     ++ +YR
Sbjct: 1910 AIVLSAKGHALESLKKYR 1927



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 2/261 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +GI+    G++  AIS +D  L  DP Y +    +G A A     + AI+ + +A+   P
Sbjct: 114 KGISLYELGRFRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVGIVP 173

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+   G +   +G   EA+    KA + +P+   + + R  +  K + +  A E  
Sbjct: 174 EYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSDPWVWYYRAFILAKQERYAQAAEAA 233

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +  + E+   +   G++L  +    +A +A  +AI+ D    +AW +      D+  
Sbjct: 234 GVFLSFEPEHADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKGFSLFDMER 293

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A   L +   +  + +K Y+ RG     LG++++A+ D    L  +P N + LY R 
Sbjct: 294 YEDATYALDKAAELSPQTTKIYYTRGKANQRLGKYREAVADFDRALAAEPENADALYSRG 353

Query: 627 -SCYHAIGEYREAIKDYDAAL 646
            SC H +  Y E++  +D  L
Sbjct: 354 VSCIH-LSRYDESLSVFDRIL 373



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 132/311 (42%), Gaps = 7/311 (2%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           V+   ++GIA    G    A+  FD  +  DP +  AL  RGT  +       A + +  
Sbjct: 550 VNAYYNKGIAFSRTGMRKEALEAFDHAIAIDPTHTLALYHRGTMLSGLGRYADAAAAYDA 609

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            +  +P    A   +G A   L    +A +   +A+E +P   D     G  N     F 
Sbjct: 610 VLALSPQNTSALYEKGVALMQLSRWKDAAEAFGQAVEQDPGLIDAWLAFGTCNANLGKFP 669

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+      + L  +N  A+ + G+AL + G++++A  A  +A++       AW +    
Sbjct: 670 DAIAAFDRVIALSPKNTQAFIHKGIALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMS 729

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
              L   E+A+   ++VL I++R S A+  +G  L  LG+  +AI      L IDP N  
Sbjct: 730 LAALQRFEEAVRSFERVLEINRRCSPAFFQKGNALAHLGKQLEAIISYDQALEIDPDNPV 789

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEF 680
            LY +         Y +AIK ++  L LE ++ +       A Y   IA     + +   
Sbjct: 790 TLYQKGIALAQRERYDDAIKTFERLLTLEPENAQ-------ALYYLGIAYAGRQRFDEAI 842

Query: 681 CWFDIDGDIDP 691
             F+   +IDP
Sbjct: 843 VAFERSLEIDP 853



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 122/254 (48%)

Query: 393  NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
            +EG Y +AI+ +D+ +   P  PE    RG A A   +   AI  + +A++ +    +A+
Sbjct: 3826 DEGSYDAAITEYDRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKALELDTHGADAF 3885

Query: 453  KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
              +G + A LG   +A++   KA+E +P  A     +G V +    F  A       ++ 
Sbjct: 3886 SHKGSSLAELGMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEGLRR 3945

Query: 513  DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
            D EN   +T  G++L+ + ++K A E++ +A+ +D +F  A+      ++ L   E+A  
Sbjct: 3946 DPENAVGWTRRGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEEAEA 4005

Query: 573  CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + ++ +   F  A+  +G  L    ++++A+      L IDPS  E      S    +
Sbjct: 4006 SFRAMISLQPDFVDAWIHQGRALQEQEKYQEALTSFKRALEIDPSRKEIWNDVGSTLDKL 4065

Query: 633  GEYREAIKDYDAAL 646
            G++ EA   Y+ AL
Sbjct: 4066 GKHEEAQICYEKAL 4079



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 124/262 (47%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG A     KY+ AI+ FD+ L  D  +  AL+ +G +RA   + E A++ F   I  +P
Sbjct: 2018 RGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFDRVITLDP 2077

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                A    G A A L    +A+  L +ALE++ N+A I   +G   ++   F  + E  
Sbjct: 2078 ENVIAHFVMGTALARLARYEDAVVALDRALEYDGNNARIYACKGYSLYRLGRFKESAESF 2137

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            +   K + ++  +  + G +L   G++++      K + ++    +AW +    Y  L+ 
Sbjct: 2138 AKAQKREPKDPFSLRFRGKSLLHNGKWEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSL 2197

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             ++A E  +Q L ID   + A++ +GL+L    + ++++        + PS  +  +  A
Sbjct: 2198 HDEAQESFEQALTIDGECATAWYQKGLVLFERERFEESLPAFERAAELAPSVQDYAFRNA 2257

Query: 627  SCYHAIGEYREAIKDYDAALDL 648
             C   +  Y EAI  +D AL L
Sbjct: 2258 LCLFMLERYPEAISAFDRALTL 2279



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/309 (23%), Positives = 139/309 (44%), Gaps = 7/309 (2%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G+A +   +   A+S FDQ L+  P +     G+G A A     + AIS +T+AI  + 
Sbjct: 3480 KGMALLKLQRAGDAVSAFDQALRLRPNFSYIWTGKGMALAALDRHKDAISCYTKAIALDR 3539

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                A+ + G +  +LG   +AI++    L   P+ A   + +G        F+ A+   
Sbjct: 3540 KDSRAYYQAGLSYLSLGRYQDAIRNFEATLVQHPSCARAFYAKGRALCGVSMFHEAITSF 3599

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               +    +   A+ Y G+A +++ E+++A + +  A+  + ++  A  +  +    L  
Sbjct: 3600 DKALSEQSDYPEAWLYRGIAEANLEEFEEALDCYNHALAQNESYATALLNKGRALIHLER 3659

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + +AL  +++VL I    + A++ +G       Q   AI   +  L I+    E  Y + 
Sbjct: 3660 TGEALAAIEKVLTIQPESADAFYYKGRAHLNRRQDDDAIDAFNRALAINRQFAEAHYYKG 3719

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
            +     G+Y EA+  +DAAL ++ D  E       AFY+K  AL+   +       +D  
Sbjct: 3720 TALARKGQYEEAVAAFDAALRIKSDYPE-------AFYEKGRALFHLERSKEALAAYDQA 3772

Query: 687  GDIDPLFKE 695
               +P + E
Sbjct: 3773 LSANPGYAE 3781



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 126/262 (48%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG A      Y  A+   ++ +  DP      + +G+    Q++  AA++ F +A+  +P
Sbjct: 2290 RGRALAEMRDYGVALDALNRAIGLDPENSFTWLAKGSVLLAQKDGAAAVAAFDQALVLDP 2349

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
             A +A   +G+A + LG   EAI     AL  E    +   ++G+   + K++N A+E  
Sbjct: 2350 KAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAYPEGSFKKGLALLRLKNYNGAIEAF 2409

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
             A ++    +  A+ + GLAL ++G+ +KA  +   A++ D +  +A  H    Y  L+ 
Sbjct: 2410 DAAIQFVPGHAQAHYHKGLALFALGKNEKAIRSFTHALEHDPSLSDALFHTGLAYAALSR 2469

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
               AL    ++L    + ++A   +G +L  LG+  +A+  L + LG++ +  +   L+ 
Sbjct: 2470 YSPALSAFDKLLESGPQNAEALFQKGRMLAKLGRPDEALAVLETSLGLENNIADVWLLKG 2529

Query: 627  SCYHAIGEYREAIKDYDAALDL 648
            S         +A++ +D AL L
Sbjct: 2530 SVLLEQERLEDALEVFDRALAL 2551



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 103/218 (47%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG+A     +Y  AI  +D+ L+ D    +A   +G++ A       A+  F +AI+ +P
Sbjct: 3854 RGLAYAAIDQYREAIKSYDKALELDTHGADAFSHKGSSLAELGMYRDALEAFEKAIEKDP 3913

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +W  +G     LG+  EA     + L  +P +A     RG+      D  AA+E  
Sbjct: 3914 ELATSWFGKGNVLYDLGKFTEACAAYDEGLRRDPENAVGWTRRGMSLAGLNDHKAAIESY 3973

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               + +D     AY   G A  ++G++++AE +    I L  +F++AW H  +  Q+   
Sbjct: 3974 DRALAIDPSFSIAYFTRGSAFEALGQFEEAEASFRAMISLQPDFVDAWIHQGRALQEQEK 4033

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
             ++AL   ++ L ID    + ++  G  L  LG+H++A
Sbjct: 4034 YQEALTSFKRALEIDPSRKEIWNDVGSTLDKLGKHEEA 4071



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 147/351 (41%), Gaps = 53/351 (15%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G++   +G Y  +I  +D+ L+ DP   E+ + +  +     + E A++   +AI+  P
Sbjct: 1474 KGVSLAAQGLYQDSIYAYDRALECDPGSGESALNKAMSLHNLGQDEDALAAAVKAIEIQP 1533

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG---------------- 490
               EAW+ RG   + LG   E+++ L  AL  +P +A + +++G                
Sbjct: 1534 DFAEAWRYRGLILSNLGRYQESVEALDHALAGDPKNARVNYQKGRAFDGLGQYENAISAY 1593

Query: 491  ---------------------IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
                                 +   +F+D   A ++    +    +N  A+  +  A  S
Sbjct: 1594 DAALQAQPDCIPARMHKGEALLFISRFRD---ATKEFGKILTEHPDNAEAWIKMARARFS 1650

Query: 530  IGEYKKAEEAHLKAIQLDRNFLEA--WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
            +G+Y +  EA   A++ + +  EA  +  L Q+  +L   E+A+E L +   ID    +A
Sbjct: 1651 LGDYTEVIEACDHALRFNADSAEALLYRGLAQY--ELGRYEEAVESLARAEQIDSHLEQA 1708

Query: 588  -YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
             YHL   LL  L ++  AI      L + P      +LR     A G Y EAI  ++ AL
Sbjct: 1709 VYHLGAALLK-LERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFENAL 1767

Query: 647  DLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYW 697
              +  S E  +        K IAL++  +        DI   I P F E W
Sbjct: 1768 RYDPRSAESAL-------NKAIALHSLGRDEESILASDIALGIQPDFAEAW 1811



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 147/373 (39%), Gaps = 75/373 (20%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +GIA     +Y  AI  F+++L  +P   +AL   G A A ++  + AI  F  +++ +P
Sbjct: 794  KGIALAQRERYDDAIKTFERLLTLEPENAQALYYLGIAYAGRQRFDEAIVAFERSLEIDP 853

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                A    G +        +A++  S+AL  + ++A   + +GI   +   +  A+  L
Sbjct: 854  KNPLAHHYMGVSLVECDRYDDALRSFSEALLLDASNASTYYYQGIAFLQSHQYEEAIAAL 913

Query: 507  SACVKLDKENKSAYTYLGLALSSIGE---------------------------------- 532
            +  +++D     A+TYLG++L+ +G                                   
Sbjct: 914  NTAIRMDTSLSDAFTYLGISLARLGRHDEAVAALNRSLAANPSQMEALVCRGESLMVLQR 973

Query: 533  YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
            Y  A E   + + L+ N + AW       + L   + AL    +VL I+   + A+  +G
Sbjct: 974  YADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTRVLEINPGNADAWARKG 1033

Query: 593  LLLHGLGQHKKAIK------DLSSGLG----------------------------IDPSN 618
            +LL  LG+  +A+       D+++G+G                            +DP  
Sbjct: 1034 VLLQDLGRTAEAVTAFSKALDINAGIGGIWMHKGDALSTLGKTSEAAEAYAEALKLDPDQ 1093

Query: 619  IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
             E           +G Y++AI  +D A+ L   S        +AF  K  +L   ++   
Sbjct: 1094 EEGWIKGGRALFDLGRYQDAIDAFDNAIALNQRS-------TVAFLYKGFSLEKINRAGE 1146

Query: 679  EFCWFDIDGDIDP 691
                F++  +IDP
Sbjct: 1147 ALQVFEVLLEIDP 1159



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 114/281 (40%)

Query: 369  CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            C  R+  S +        +G A ++ G   +AI    + L+  P        R  A A  
Sbjct: 2578 CFDRVVTSDTGCAQAWFRKGSALLSNGDLRAAIEALTKALELKPDNANGWYDRAVALAGL 2637

Query: 429  RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
               E +I  +  A+  NP    A+  +G A + LG   +AI+    A   +P  A    E
Sbjct: 2638 GRYEESIPSYDRALSLNPKYTSAYFDKGSALSRLGRDRQAIEAFEMASAIDPEFAVAYLE 2697

Query: 489  RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            +G+   +      AV    A + LD  N  A    GLAL+++ ++  A      A+++D 
Sbjct: 2698 KGLALARLSKNKEAVAAFDATLALDPANVPALFNKGLALANLKKFADAITVFDAALRIDA 2757

Query: 549  NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
               EAW         L + + A+      L ID      ++ +G+ L   G++ +A+   
Sbjct: 2758 KHYEAWFAKGYAQSRLRHYDDAVGAFDHALAIDPGRYAVWYEKGVALARAGKNDEAVAAF 2817

Query: 609  SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            S  +  D    E  Y +      +GE  +A+  +  ALDL+
Sbjct: 2818 SEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRALDLD 2858



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 131/315 (41%), Gaps = 21/315 (6%)

Query: 384  RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
            R+ +G A +   ++  A   F +IL E P   EA I    AR        ++ D+TE I+
Sbjct: 1607 RMHKGEALLFISRFRDATKEFGKILTEHPDNAEAWIKMARARF-------SLGDYTEVIE 1659

Query: 444  S-------NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
            +       N  + EA   RG A+  LG   EA++ L++A + + +    ++  G    K 
Sbjct: 1660 ACDHALRFNADSAEALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAVYHLGAALLKL 1719

Query: 497  KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
            + +  A+      + L  +  +A+   G+AL++ G Y +A  +   A++ D    E+  +
Sbjct: 1720 ERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFENALRYDPRSAESALN 1779

Query: 557  LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                   L   E+++      L I   F++A++ +G+ L  L ++  A+   S  L +D 
Sbjct: 1780 KAIALHSLGRDEESILASDIALGIQPDFAEAWYYKGVALETLKRYADAVPAFSRSLELDS 1839

Query: 617  SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKI 676
            +     +    C   +  Y EA   +D  L L  D          A++ K  AL    K 
Sbjct: 1840 TTTHAWFEMGLCLVELQRYEEAAGAFDHVLGLVSDYPP-------AYFHKGRALALLGKY 1892

Query: 677  NSEFCWFDIDGDIDP 691
                  FD    I P
Sbjct: 1893 EEAVVAFDSALAITP 1907



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 112/260 (43%), Gaps = 34/260 (13%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G A   +G+Y  A++ FD  L+    YPEA   +G A       + A++ + +A+ +NP
Sbjct: 3718 KGTALARKGQYEEAVAAFDAALRIKSDYPEAFYEKGRALFHLERSKEALAAYDQALSANP 3777

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               EA  ++G+    L     AI+   +ALE  P+     + +    +    ++AA+ + 
Sbjct: 3778 GYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWKARTLYDEGSYDAAITEY 3837

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               + +  +    Y   GLA ++I +Y++A +++ KA++LD +  +A+ H          
Sbjct: 3838 DRAIAIKPDRPELYRDRGLAYAAIDQYREAIKSYDKALELDTHGADAFSH---------- 3887

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
                                    +G  L  LG ++ A++     +  DP      + + 
Sbjct: 3888 ------------------------KGSSLAELGMYRDALEAFEKAIEKDPELATSWFGKG 3923

Query: 627  SCYHAIGEYREAIKDYDAAL 646
            +  + +G++ EA   YD  L
Sbjct: 3924 NVLYDLGKFTEACAAYDEGL 3943



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/318 (22%), Positives = 132/318 (41%), Gaps = 35/318 (11%)

Query: 381  VDFRL-SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
            +D+ L  RG A +   +Y  A+  FD  L   P Y  A   +G + A Q   + +I  + 
Sbjct: 1433 LDYALFHRGAALMKLERYREAVQAFDAALLLLPKYAPAHHLKGVSLAAQGLYQDSIYAYD 1492

Query: 440  EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
             A++ +P +GE+   +  +   LG+  +A+    KA+E +P+ A+    RG++      +
Sbjct: 1493 RALECDPGSGESALNKAMSLHNLGQDEDALAAAVKAIEIQPDFAEAWRYRGLILSNLGRY 1552

Query: 500  NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL-------- 551
              +VE L   +  D +N       G A   +G+Y+ A  A+  A+Q   + +        
Sbjct: 1553 QESVEALDHALAGDPKNARVNYQKGRAFDGLGQYENAISAYDAALQAQPDCIPARMHKGE 1612

Query: 552  --------------------------EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
                                      EAW  + +    L +  + +E     L  +   +
Sbjct: 1613 ALLFISRFRDATKEFGKILTEHPDNAEAWIKMARARFSLGDYTEVIEACDHALRFNADSA 1672

Query: 586  KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            +A   RGL  + LG++++A++ L+    ID    + +Y   +    +  Y +AI  +D  
Sbjct: 1673 EALLYRGLAQYELGRYEEAVESLARAEQIDSHLEQAVYHLGAALLKLERYGDAIPAFDRV 1732

Query: 646  LDLELDSMEKFVLQCLAF 663
            L L+ D      L+ +A 
Sbjct: 1733 LSLKPDQATAHHLRGVAL 1750



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 109/242 (45%)

Query: 422  GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
            G A   Q   E AI+ F + ++ +P   +A  + G   A L +  EAI    + LE    
Sbjct: 1951 GLAYIEQHRDEKAIAAFAKTLRIDPENPDALFQAGIVLARLEKYDEAIGLFDRYLELGKE 2010

Query: 482  SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            +A IL+ERG   F  + ++ A+      + LD  +  A    G + +++G+Y++A     
Sbjct: 2011 NAGILYERGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFD 2070

Query: 542  KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
            + I LD   + A   +      LA  E A+  L + L  D   ++ Y  +G  L+ LG+ 
Sbjct: 2071 RVITLDPENVIAHFVMGTALARLARYEDAVVALDRALEYDGNNARIYACKGYSLYRLGRF 2130

Query: 602  KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
            K++ +  +     +P +   L  R       G++ E I  +D  L +E  S + +  + +
Sbjct: 2131 KESAESFAKAQKREPKDPFSLRFRGKSLLHNGKWEEGIAIFDKLLGIEPKSADAWYYKGI 2190

Query: 662  AF 663
            A+
Sbjct: 2191 AY 2192



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 89/203 (43%)

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S  EA  R+G     LG   EA+    +AL   P      + +GI  +    +  A++  
Sbjct: 4   SDAEALMRQGTELYDLGRHQEAVVMFDRALTLFPKLPKAHYFKGIALYDLGRYEDALDSY 63

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + LD  + +++      L+ IG  K+A +A  + I L  +  EAW        +L  
Sbjct: 64  DHALALDPSDINSWYNKAATLAQIGRNKEALDACDRLIALRFDNAEAWILKGISLYELGR 123

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              A+      L ID  ++K Y+ +G+ L  LG+H +AI      +GI P   +  Y   
Sbjct: 124 FRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVGIVPEYAKAYYNMG 183

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
              + IG Y EA+  ++ A DL+
Sbjct: 184 ISLYEIGRYDEALGAFEKAHDLD 206



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 122/298 (40%), Gaps = 40/298 (13%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            G A +   +Y  AI  FD++L   P    A   RG A A Q     AIS F  A++ +P 
Sbjct: 1713 GAALLKLERYGDAIPAFDRVLSLKPDQATAHHLRGVALAAQGMYPEAISSFENALRYDPR 1772

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
            + E+   +  A  +LG   E+I     AL  +P+ A+  + +G+     K +  AV   S
Sbjct: 1773 SAESALNKAIALHSLGRDEESILASDIALGIQPDFAEAWYYKGVALETLKRYADAVPAFS 1832

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
              ++LD     A+  +GL L  +  Y++A  A    + L  ++  A+ H  +    L   
Sbjct: 1833 RSLELDSTTTHAWFEMGLCLVELQRYEEAAGAFDHVLGLVSDYPPAYFHKGRALALLGKY 1892

Query: 568  EKALECLQQVLYID-----------------KRFSKA------------------YHLRG 592
            E+A+      L I                  K++ +A                  YHL  
Sbjct: 1893 EEAVVAFDSALAITPGDAIVLSAKGHALESLKKYREAAAAFEEATSVNPAAADDYYHLG- 1951

Query: 593  LLLHGLGQHK--KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              L  + QH+  KAI   +  L IDP N + L+        + +Y EAI  +D  L+L
Sbjct: 1952 --LAYIEQHRDEKAIAAFAKTLRIDPENPDALFQAGIVLARLEKYDEAIGLFDRYLEL 2007



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 2/260 (0%)

Query: 383  FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
            F   R +A +  GKY  A+  FD  L   P     L  +G A    ++   A + F EA 
Sbjct: 1880 FHKGRALALL--GKYEEAVVAFDSALAITPGDAIVLSAKGHALESLKKYREAAAAFEEAT 1937

Query: 443  QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
              NP+A + +   G A        +AI   +K L  +P + D L + GIV  + + ++ A
Sbjct: 1938 SVNPAAADDYYHLGLAYIEQHRDEKAIAAFAKTLRIDPENPDALFQAGIVLARLEKYDEA 1997

Query: 503  VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
            +      ++L KEN       G A  ++ +Y +A  +  +A+ LD N + A     Q   
Sbjct: 1998 IGLFDRYLELGKENAGILYERGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRA 2057

Query: 563  DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            +L   E+A+    +V+ +D     A+ + G  L  L +++ A+  L   L  D +N    
Sbjct: 2058 NLGQYEEAVTLFDRVITLDPENVIAHFVMGTALARLARYEDAVVALDRALEYDGNNARIY 2117

Query: 623  YLRASCYHAIGEYREAIKDY 642
              +    + +G ++E+ + +
Sbjct: 2118 ACKGYSLYRLGRFKESAESF 2137



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 132/331 (39%), Gaps = 72/331 (21%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG + ++ GK+   I+IFD++L  +P   +A   +G A +     + A   F +A+  + 
Sbjct: 2154 RGKSLLHNGKWEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSLHDEAQESFEQALTIDG 2213

Query: 447  SAGEAWKRRGQA---------------RAA-LGESV------------------EAIQDL 472
                AW ++G                 RAA L  SV                  EAI   
Sbjct: 2214 ECATAWYQKGLVLFERERFEESLPAFERAAELAPSVQDYAFRNALCLFMLERYPEAISAF 2273

Query: 473  SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL--------- 523
             +AL   P +A I + RG    + +D+  A++ L+  + LD EN  ++T+L         
Sbjct: 2274 DRALTLGPETAVIQYYRGRALAEMRDYGVALDALNRAIGLDPEN--SFTWLAKGSVLLAQ 2331

Query: 524  ---------------------------GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
                                       G A S +G  ++A  A+  A+ L+  + E    
Sbjct: 2332 KDGAAAVAAFDQALVLDPKAADAAFFKGEAFSLLGNDEEAIHAYDLALSLESAYPEGSFK 2391

Query: 557  LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                   L N   A+E     +      ++A++ +GL L  LG+++KAI+  +  L  DP
Sbjct: 2392 KGLALLRLKNYNGAIEAFDAAIQFVPGHAQAHYHKGLALFALGKNEKAIRSFTHALEHDP 2451

Query: 617  SNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            S  + L+     Y A+  Y  A+  +D  L+
Sbjct: 2452 SLSDALFHTGLAYAALSRYSPALSAFDKLLE 2482



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 71/318 (22%), Positives = 129/318 (40%), Gaps = 45/318 (14%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + +G    + G++  A+ +FD+ L   P  P+A   +G A       E A+  +  A+  
Sbjct: 10  MRQGTELYDLGRHQEAVVMFDRALTLFPKLPKAHYFKGIALYDLGRYEDALDSYDHALAL 69

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQ--DLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +PS   +W  +    A +G + EA+   D   AL F+   A IL  +GI  ++   F  A
Sbjct: 70  DPSDINSWYNKAATLAQIGRNKEALDACDRLIALRFDNAEAWIL--KGISLYELGRFRDA 127

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +      + +D      Y   G+AL+ +G + +A  A+ KA+                  
Sbjct: 128 ISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVG----------------- 170

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                            I   ++KAY+  G+ L+ +G++ +A+        +DPS+    
Sbjct: 171 -----------------IVPEYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSDPWVW 213

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCW 682
           Y RA        Y +A +     L  E +  + +V+Q        I+LY   +++     
Sbjct: 214 YYRAFILAKQERYAQAAEAAGVFLSFEPEHADIWVIQG-------ISLYRLRRLDEAADA 266

Query: 683 FDIDGDIDPLFKEYWCKR 700
           FD   + DPL  + W  +
Sbjct: 267 FDRAIEQDPLAPDAWLYK 284



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 126/332 (37%), Gaps = 41/332 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +GIA  + G+Y  A+  +D  L  DP    +   +    A     + A+      I    
Sbjct: 46  KGIALYDLGRYEDALDSYDHALALDPSDINSWYNKAATLAQIGRNKEALDACDRLIALRF 105

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EAW  +G +   LG   +AI     AL  +P  A + + +GI        + A+   
Sbjct: 106 DNAEAWILKGISLYELGRFRDAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAY 165

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------RNFL------ 551
              V +  E   AY  +G++L  IG Y +A  A  KA  LD         R F+      
Sbjct: 166 GKAVGIVPEYAKAYYNMGISLYEIGRYDEALGAFEKAHDLDPSDPWVWYYRAFILAKQER 225

Query: 552 -----EAWGHLTQFYQDLANS--------------EKALECLQQVLYIDKRFSKAYHLRG 592
                EA G    F  + A+               ++A +   + +  D     A+  +G
Sbjct: 226 YAQAAEAAGVFLSFEPEHADIWVIQGISLYRLRRLDEAADAFDRAIEQDPLAPDAWLYKG 285

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
             L  + +++ A   L     + P   +  Y R      +G+YREA+ D+D AL  E ++
Sbjct: 286 FSLFDMERYEDATYALDKAAELSPQTTKIYYTRGKANQRLGKYREAVADFDRALAAEPEN 345

Query: 653 MEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
            +       A Y + ++    S+ +     FD
Sbjct: 346 AD-------ALYSRGVSCIHLSRYDESLSVFD 370



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 84/192 (43%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G +    G Y  A+  F++ +++DP    +  G+G       +   A + + E ++ +P
Sbjct: 3888 KGSSLAELGMYRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACAAYDEGLRRDP 3947

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                 W RRG + A L +   AI+   +AL  +P+ +     RG        F  A    
Sbjct: 3948 ENAVGWTRRGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEEAEASF 4007

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
             A + L  +   A+ + G AL    +Y++A  +  +A+++D +  E W  +      L  
Sbjct: 4008 RAMISLQPDFVDAWIHQGRALQEQEKYQEALTSFKRALEIDPSRKEIWNDVGSTLDKLGK 4067

Query: 567  SEKALECLQQVL 578
             E+A  C ++ L
Sbjct: 4068 HEEAQICYEKAL 4079



 Score = 59.7 bits (143), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 7/218 (3%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           A+ L  +G   +       AV      + L  +   A+ + G+AL  +G Y+ A +++  
Sbjct: 6   AEALMRQGTELYDLGRHQEAVVMFDRALTLFPKLPKAHYFKGIALYDLGRYEDALDSYDH 65

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           A+ LD + + +W +       +  +++AL+   +++ +    ++A+ L+G+ L+ LG+ +
Sbjct: 66  ALALDPSDINSWYNKAATLAQIGRNKEALDACDRLIALRFDNAEAWILKGISLYELGRFR 125

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            AI      L IDP+  +  Y +      +G + EAI  Y  A+ +  +  +       A
Sbjct: 126 DAISAYDHALAIDPTYAKVYYNKGIALADLGRHDEAIAAYGKAVGIVPEYAK-------A 178

Query: 663 FYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           +Y   I+LY   + +     F+   D+DP     W  R
Sbjct: 179 YYNMGISLYEIGRYDEALGAFEKAHDLDPSDPWVWYYR 216



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/348 (20%), Positives = 142/348 (40%), Gaps = 41/348 (11%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +GIA +   +Y  AI+  +  ++ D    +A    G + A     + A++    ++ +NP
Sbjct: 896  QGIAFLQSHQYEEAIAALNTAIRMDTSLSDAFTYLGISLARLGRHDEAVAALNRSLAANP 955

Query: 447  SAGE----------------------------------AWKRRGQARAALGESVEAIQDL 472
            S  E                                  AW ++G A   L +  +A+   
Sbjct: 956  SQMEALVCRGESLMVLQRYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVY 1015

Query: 473  SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            ++ LE  P +AD    +G++         AV   S  + ++      + + G ALS++G+
Sbjct: 1016 TRVLEINPGNADAWARKGVLLQDLGRTAEAVTAFSKALDINAGIGGIWMHKGDALSTLGK 1075

Query: 533  YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
              +A EA+ +A++LD +  E W    +   DL   + A++     + +++R + A+  +G
Sbjct: 1076 TSEAAEAYAEALKLDPDQEEGWIKGGRALFDLGRYQDAIDAFDNAIALNQRSTVAFLYKG 1135

Query: 593  LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
              L  + +  +A++     L IDP N E  Y         G  ++A+  +++AL +  D+
Sbjct: 1136 FSLEKINRAGEALQVFEVLLEIDPHNSEAHYHMGLALAGSGRPKDALAAFESALKIR-DT 1194

Query: 653  MEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                     A+Y K   L    K       FD   + +P + E +  R
Sbjct: 1195 FAP------AWYNKGKMLLDLGKYQEALAAFDQALEREPAYTEVFYSR 1236



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 6/281 (2%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            G+  V   +Y  A   FD +L     YP A   +G A A   + E A+  F  A+   P 
Sbjct: 1849 GLCLVELQRYEEAAGAFDHVLGLVSDYPPAYFHKGRALALLGKYEEAVVAFDSALAITPG 1908

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
                   +G A  +L +  EA     +A    P +AD  +  G+   +      A+   +
Sbjct: 1909 DAIVLSAKGHALESLKKYREAAAAFEEATSVNPAAADDYYHLGLAYIEQHRDEKAIAAFA 1968

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ---FYQDL 564
              +++D EN  A    G+ L+ + +Y +A     + ++L +   E  G L +    Y  L
Sbjct: 1969 KTLRIDPENPDALFQAGIVLARLEKYDEAIGLFDRYLELGK---ENAGILYERGCAYFAL 2025

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
                +A+    + L +D     A   +G     LGQ+++A+      + +DP N+   ++
Sbjct: 2026 QKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFDRVITLDPENVIAHFV 2085

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
              +    +  Y +A+   D AL+ + ++   +  +  + Y+
Sbjct: 2086 MGTALARLARYEDAVVALDRALEYDGNNARIYACKGYSLYR 2126



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 1/273 (0%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G+A     +YA A+  F + L+ D     A    G      +  E A   F   +    
Sbjct: 1814 KGVALETLKRYADAVPAFSRSLELDSTTTHAWFEMGLCLVELQRYEEAAGAFDHVLGLVS 1873

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                A+  +G+A A LG+  EA+     AL   P  A +L  +G      K +  A    
Sbjct: 1874 DYPPAYFHKGRALALLGKYEEAVVAFDSALAITPGDAIVLSAKGHALESLKKYREAAAAF 1933

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
                 ++      Y +LGLA       +KA  A  K +++D    +A          L  
Sbjct: 1934 EEATSVNPAAADDYYHLGLAYIEQHRDEKAIAAFAKTLRIDPENPDALFQAGIVLARLEK 1993

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             ++A+    + L + K  +   + RG     L ++ +AI      L +D ++I  L  + 
Sbjct: 1994 YDEAIGLFDRYLELGKENAGILYERGCAYFALQKYSEAIASFDRALALDANHIGALVKKG 2053

Query: 627  SCYHAIGEYREAIKDYDAALDLELDS-MEKFVL 658
                 +G+Y EA+  +D  + L+ ++ +  FV+
Sbjct: 2054 QSRANLGQYEEAVTLFDRVITLDPENVIAHFVM 2086



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 69/328 (21%), Positives = 117/328 (35%), Gaps = 68/328 (20%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA----- 441
            +G+A    GK   A++ F + +  D   PEA   +G A     E E A++ FT A     
Sbjct: 2800 KGVALARAGKNDEAVAAFSEAIARDDKKPEAQYEKGRALLELGEDEQAVTSFTRALDLDT 2859

Query: 442  -----------------------------IQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
                                         + + P   +AW  RG A   LG   +A+Q  
Sbjct: 2860 SFGDAAYYLGLALERVGKFTDAITAYDRMVAARPDHSDAWYHRGIASERLGRDNDAVQAY 2919

Query: 473  SKALEFEPNSADILHERGIVNFKFKDFNAAV------------------EDLSACVKLDK 514
             KA + EP++  +L   G    +   F  A+                  E   A   L +
Sbjct: 2920 EKARQIEPHNLPLLFADGRAWARLGQFEDAIHLFDIALGKEPGNGEILFEKAKALAALGR 2979

Query: 515  ENKS------AYTYL----------GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
             +++      A+T L          GL+L ++  Y+ A+ A   A+ L  +  E W    
Sbjct: 2980 HDEAQEIFRLAFTQLTDNYEPAYLRGLSLLALERYEDADMAFDAALSLSPDLPEIWEKKG 3039

Query: 559  QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                   N E A+      + +      AY  RG  L  L ++ +A+      L ++P++
Sbjct: 3040 GALMHAGNYEGAVAAFDHAISLLPDDPGAYLERGRALAALNRNDEAVASFDQVLALEPAD 3099

Query: 619  IECLYLRASCYHAIGEYREAIKDYDAAL 646
                + R    +   +Y  A++  D  L
Sbjct: 3100 PVASFERGRALYYAAKYEHAVEALDTTL 3127



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)

Query: 75   RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA-------LSVWE 127
            R    + L  HK  I   D+AL +DP+   AY  +G AF ALG+ EEA       +S+  
Sbjct: 3956 RGMSLAGLNDHKAAIESYDRALAIDPSFSIAYFTRGSAFEALGQFEEAEASFRAMISLQP 4015

Query: 128  KGYEHALHQSADLKQFLELEELLTAAKQ 155
               +  +HQ   L++  + +E LT+ K+
Sbjct: 4016 DFVDAWIHQGRALQEQEKYQEALTSFKR 4043



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 62/117 (52%), Gaps = 5/117 (4%)

Query: 14   NKTHKTICEIDELVRVDSVMASAIT-ARIELAKLCSLRNWSKAIRILD-SLLAQSYEIQD 71
            ++  + I  ++  +R+D+ ++ A T   I LA+L       +A+  L+ SL A   +++ 
Sbjct: 904  HQYEEAIAALNTAIRMDTSLSDAFTYLGISLARLG---RHDEAVAALNRSLAANPSQMEA 960

Query: 72   ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
            +  R      L+ +   +   D+ L L+P ++ A++ KG A   L +K++AL+V+ +
Sbjct: 961  LVCRGESLMVLQRYADAVETFDRILSLNPNVISAWMQKGAALERLVKKQDALAVYTR 1017



 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 14   NKTHKTICEIDELVRVDSVMASAI-TARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
            ++  K I    + +R+D     A+  A I LA+L     + +AI + D  L    E   I
Sbjct: 1958 HRDEKAIAAFAKTLRIDPENPDALFQAGIVLARL---EKYDEAIGLFDRYLELGKENAGI 2014

Query: 73   C-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
               R   Y  L+ +   I   D+AL LD   + A + KG + + LG+ EEA++++++
Sbjct: 2015 LYERGCAYFALQKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFDR 2071


>gi|298492639|ref|YP_003722816.1| hypothetical protein Aazo_4355 ['Nostoc azollae' 0708]
 gi|298234557|gb|ADI65693.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
          Length = 1192

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 127/271 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+ Q   G    A++ ++Q  K +P   E    +       +  E AI+ + +AI   P
Sbjct: 309 QGLQQAKSGDLLGALAFYNQATKLEPESAEYWFNQALTLFHLKRFEEAIAAYDQAIALKP 368

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG      G+   AI    KA+E +PN  +    RG+   K      A+   
Sbjct: 369 DFFKAWYNRGGIMVEFGDFDGAITSFDKAIELQPNYQEAWSSRGLALLKLGLIWEAISSY 428

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L ++++  + Y G+AL+   +Y+ A  ++ +AI++  ++ E W        +L  
Sbjct: 429 DQALELQRQDQETWYYRGVALAVGEQYEDAIASYNQAIEIQPDYHEVWIDRGVVLFNLKR 488

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+E   Q L I   F  A++ RG+ L  L + ++AI      + I P      Y +A
Sbjct: 489 WSEAIESWDQALSIQPDFYLAWYNRGIALENLARREEAITSYQKAITIKPDFHPAWYNQA 548

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
             ++ +  + EAI  YD+AL+++LD  E ++
Sbjct: 549 VAFYYLNRFAEAISCYDSALEIKLDYWEAWL 579



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 115/238 (48%), Gaps = 3/238 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG   V  G +  AI+ FD+ ++  P Y EA   RG A      +  AIS + +A++  
Sbjct: 376 NRGGIMVEFGDFDGAITSFDKAIELQPNYQEAWSSRGLALLKLGLIWEAISSYDQALELQ 435

Query: 446 PSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
               E W  RG A  A+GE  E AI   ++A+E +P+  ++  +RG+V F  K ++ A+E
Sbjct: 436 RQDQETWYYRGVA-LAVGEQYEDAIASYNQAIEIQPDYHEVWIDRGVVLFNLKRWSEAIE 494

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                + +  +   A+   G+AL ++   ++A  ++ KAI +  +F  AW +    +  L
Sbjct: 495 SWDQALSIQPDFYLAWYNRGIALENLARREEAITSYQKAITIKPDFHPAWYNQAVAFYYL 554

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
               +A+ C    L I   + +A+  RG  +  L   K ++  LSS +     N+  L
Sbjct: 555 NRFAEAISCYDSALEIKLDYWEAWLGRGGAVGNLVNDKFSLS-LSSTIAASNPNLNQL 611



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 9/198 (4%)

Query: 468 AIQDLSKALEFEP-------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
           AI+D  +AL   P       N A     +G+   K  D   A+   +   KL+ E+   +
Sbjct: 281 AIRDERQALIQRPSFQITVTNQAQAWFYQGLQQAKSGDLLGALAFYNQATKLEPESAEYW 340

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
               L L  +  +++A  A+ +AI L  +F +AW +      +  + + A+    + + +
Sbjct: 341 FNQALTLFHLKRFEEAIAAYDQAIALKPDFFKAWYNRGGIMVEFGDFDGAITSFDKAIEL 400

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE-YREAI 639
              + +A+  RGL L  LG   +AI      L +   + E  Y R     A+GE Y +AI
Sbjct: 401 QPNYQEAWSSRGLALLKLGLIWEAISSYDQALELQRQDQETWYYRGVAL-AVGEQYEDAI 459

Query: 640 KDYDAALDLELDSMEKFV 657
             Y+ A++++ D  E ++
Sbjct: 460 ASYNQAIEIQPDYHEVWI 477



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 5/117 (4%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG+   N  +++ AI  +DQ L   P +  A   RG A       E AI+ + +AI  
Sbjct: 477 IDRGVVLFNLKRWSEAIESWDQALSIQPDFYLAWYNRGIALENLARREEAITSYQKAITI 536

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-----IVNFKF 496
            P    AW  +  A   L    EAI     ALE + +  +    RG     +VN KF
Sbjct: 537 KPDFHPAWYNQAVAFYYLNRFAEAISCYDSALEIKLDYWEAWLGRGGAVGNLVNDKF 593


>gi|116753411|ref|YP_842529.1| TPR repeat-containing protein [Methanosaeta thermophila PT]
 gi|116664862|gb|ABK13889.1| Tetratricopeptide TPR_2 repeat protein [Methanosaeta thermophila
           PT]
          Length = 366

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 15/286 (5%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           +S+   L +   +  +G Y  AI  +D++L  DPM   A  GRG A       E A+  +
Sbjct: 2   VSIAALLQKAEEKYLDGSYDEAIEYYDRVLDIDPMNTAAWCGRGMACFCFSRYEDALECY 61

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP---------------NSA 483
           + AI+++P    AW+ R +    LG   EAI    +A++ +P               + A
Sbjct: 62  SRAIEADPECVPAWECRAEVLFILGRCDEAISSYQEAIDRDPAYALAWIERCIDSRPDDA 121

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
           +   ++G+       +  A+E     + +D      +  LG +L +IG + +A E   +A
Sbjct: 122 ESWRQKGLALLSMGRYEEAIEAYRMALDIDPSQARDWCILGESLQTIGRHSEALECFERA 181

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
           ++L  +    W  + +        ++ALEC ++ L +D    +A+H +G+    +G   K
Sbjct: 182 LELSPSDSACWIRMGESMHSTGRYDEALECYEEALRLDPGSVQAWHGKGITYRAMGIPSK 241

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           AI  + S L +DP + +  Y +   + A+G Y +A++ +D  L ++
Sbjct: 242 AIDAIDSALTLDPEHAQSWYAKGITFRAMGLYEDALECFDRVLRID 287



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 15/259 (5%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGR---------------GTARAFQRELEAAISDFT 439
           G+   AIS + + +  DP Y  A I R               G A       E AI  + 
Sbjct: 86  GRCDEAISSYQEAIDRDPAYALAWIERCIDSRPDDAESWRQKGLALLSMGRYEEAIEAYR 145

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            A+  +PS    W   G++   +G   EA++   +ALE  P+ +      G        +
Sbjct: 146 MALDIDPSQARDWCILGESLQTIGRHSEALECFERALELSPSDSACWIRMGESMHSTGRY 205

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           + A+E     ++LD  +  A+   G+   ++G   KA +A   A+ LD    ++W     
Sbjct: 206 DEALECYEEALRLDPGSVQAWHGKGITYRAMGIPSKAIDAIDSALTLDPEHAQSWYAKGI 265

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            ++ +   E ALEC  +VL ID   + A   R   L+ LG++ +A+      + ++P + 
Sbjct: 266 TFRAMGLYEDALECFDRVLRIDPGNASALKSRAWSLYNLGRYAEALSACEGAISVNPLDE 325

Query: 620 ECLYLRASCYHAIGEYREA 638
           +  Y       A+G Y E+
Sbjct: 326 DAWYNMGIVLKALGRYTES 344



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/152 (21%), Positives = 71/152 (46%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A+  +++ L+ DP   +A  G+G           AI     A+  +P   ++W  
Sbjct: 203 GRYDEALECYEEALRLDPGSVQAWHGKGITYRAMGIPSKAIDAIDSALTLDPEHAQSWYA 262

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G    A+G   +A++   + L  +P +A  L  R    +    +  A+      + ++ 
Sbjct: 263 KGITFRAMGLYEDALECFDRVLRIDPGNASALKSRAWSLYNLGRYAEALSACEGAISVNP 322

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            ++ A+  +G+ L ++G Y +++ A +KA ++
Sbjct: 323 LDEDAWYNMGIVLKALGRYTESDMAFIKAREI 354


>gi|384207605|ref|YP_005593325.1| hypothetical protein Bint_0109 [Brachyspira intermedia PWS/A]
 gi|343385255|gb|AEM20745.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 714

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 124/224 (55%), Gaps = 14/224 (6%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI DF  AI+ +P+  +A+  RG +++ LG   EAI+D ++A+E EP+++D    RGI
Sbjct: 14  EEAIEDFNRAIKLDPNNSDAYLNRGISKSDLGNDKEAIEDFNRAIELEPDNSDAYLNRGI 73

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                 +   A+ED +  ++L+  N+  Y Y GL+ S++  Y++A + + KAI+L  N  
Sbjct: 74  SKSDLGNDKEAIEDYNKSIELNPYNEEGYIYRGLSKSNLKRYREAIKDYNKAIELVPNDS 133

Query: 552 EAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           E +       G+L ++   + +  KA+E      +I       Y  RG+    L ++++A
Sbjct: 134 EVYLNRGASKGYLKEYESSINDFNKAIELNPNDEHI-------YFNRGISKFDLKRYREA 186

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           I+D +  + ++P+ I+    R +    +  YREAI+D++ A++L
Sbjct: 187 IEDYNKAIKLNPNYIDAYINRGASKFDLKRYREAIEDFNKAIEL 230



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 149/285 (52%), Gaps = 2/285 (0%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  L+RGI++ + G    AI  F++ ++ +P   +A + RG +++     + AI D+ ++
Sbjct: 32  DAYLNRGISKSDLGNDKEAIEDFNRAIELEPDNSDAYLNRGISKSDLGNDKEAIEDYNKS 91

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP   E +  RG +++ L    EAI+D +KA+E  PN +++   RG      K++ +
Sbjct: 92  IELNPYNEEGYIYRGLSKSNLKRYREAIKDYNKAIELVPNDSEVYLNRGASKGYLKEYES 151

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           ++ D +  ++L+  ++  Y   G++   +  Y++A E + KAI+L+ N+++A+ +     
Sbjct: 152 SINDFNKAIELNPNDEHIYFNRGISKFDLKRYREAIEDYNKAIKLNPNYIDAYINRGASK 211

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            DL    +A+E   + + ++   +  Y   GL    L ++   I++ +  + ++P+  + 
Sbjct: 212 FDLKRYREAIEDFNKAIELNPNANDVYFNLGLSNFNLKKYADVIENFNKVIELNPNYKDA 271

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            +LR  C   +     AI+D+ +   +  D+   +++  L  +++
Sbjct: 272 YFLRGICKIYLNN-ENAIEDFRSFFKINEDN-NIYIITILQLFEE 314



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 152/310 (49%), Gaps = 15/310 (4%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI  F++ +K DP   +A + RG +++     + AI DF  AI+  P   +A+  R
Sbjct: 12  RYEEAIEDFNRAIKLDPNNSDAYLNRGISKSDLGNDKEAIEDFNRAIELEPDNSDAYLNR 71

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G +++ LG   EAI+D +K++E  P + +    RG+     K +  A++D +  ++L   
Sbjct: 72  GISKSDLGNDKEAIEDYNKSIELNPYNEEGYIYRGLSKSNLKRYREAIKDYNKAIELVPN 131

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALEC 573
           +   Y   G +   + EY+ +     KAI+L+ N    + +  +++F  DL    +A+E 
Sbjct: 132 DSEVYLNRGASKGYLKEYESSINDFNKAIELNPNDEHIYFNRGISKF--DLKRYREAIED 189

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             + + ++  +  AY  RG     L ++++AI+D +  + ++P+  +  +        + 
Sbjct: 190 YNKAIKLNPNYIDAYINRGASKFDLKRYREAIEDFNKAIELNPNANDVYFNLGLSNFNLK 249

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGD----- 688
           +Y + I++++  ++L  +  + + L+ +     +I L   + I     +F I+ D     
Sbjct: 250 KYADVIENFNKVIELNPNYKDAYFLRGIC----KIYLNNENAIEDFRSFFKINEDNNIYI 305

Query: 689 --IDPLFKEY 696
             I  LF+EY
Sbjct: 306 ITILQLFEEY 315



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 55/103 (53%)

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           F+  +   E+A+E   + + +D   S AY  RG+    LG  K+AI+D +  + ++P N 
Sbjct: 6   FFVGVIRYEEAIEDFNRAIKLDPNNSDAYLNRGISKSDLGNDKEAIEDFNRAIELEPDNS 65

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           +    R      +G  +EAI+DY+ +++L   + E ++ + L+
Sbjct: 66  DAYLNRGISKSDLGNDKEAIEDYNKSIELNPYNEEGYIYRGLS 108



 Score = 39.7 bits (91), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 18/66 (27%), Positives = 40/66 (60%)

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G    G+ ++++AI+D +  + +DP+N +    R      +G  +EAI+D++ A++LE D
Sbjct: 4   GSFFVGVIRYEEAIEDFNRAIKLDPNNSDAYLNRGISKSDLGNDKEAIEDFNRAIELEPD 63

Query: 652 SMEKFV 657
           + + ++
Sbjct: 64  NSDAYL 69


>gi|386828172|ref|ZP_10115279.1| tetratricopeptide repeat protein [Beggiatoa alba B18LD]
 gi|386429056|gb|EIJ42884.1| tetratricopeptide repeat protein [Beggiatoa alba B18LD]
          Length = 613

 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 2/262 (0%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPS 447
           IA      Y   +  FD++++  P   EA +GRG A RA  R+ E AI  F + IQ  P 
Sbjct: 198 IALATLTHYKEELETFDKVIQLQPDNAEAWLGRGVALRALTRD-EDAIEAFDKVIQLQPD 256

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EAW  RG A + L    EAI+   K ++ +P++A+  + +G        +  A++  +
Sbjct: 257 NAEAWHNRGNALSILTRYEEAIETFDKVIQLQPDNAETWNNQGYALNALTRYEEAIKAFN 316

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             V+L  +N   +   G+ALS++  Y++A E++ KAIQ   +   AW          A  
Sbjct: 317 KAVQLQPDNAEIWFNRGIALSNLARYQEAIESYDKAIQFKPDLATAWSSRGVALFHSARY 376

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+A+E   + +  +   + A++ RGL L  L ++++AI+     +   P   +    R  
Sbjct: 377 EEAIESCDKAIQFNPDLANAWYNRGLALRHLVRYEEAIESYDKAIECKPDFADAWNNRGI 436

Query: 628 CYHAIGEYREAIKDYDAALDLE 649
             + +  Y+E+++ +D  + L+
Sbjct: 437 VLNYLARYKESVESFDKVIQLK 458



 Score =  110 bits (276), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 16/296 (5%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A +   +Y  AI  FD++++  P  P+A + RG A       +AA  +F + ++ 
Sbjct: 27  LQRGSALIALSRYEEAIECFDKVIQLQPNNPDAWLQRGFALGVLTHYQAATENFDKTVKL 86

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
                +AW   G  R  L     A++D  K ++ +PN+A    +RG        +  A+E
Sbjct: 87  QADNTKAWDYNGVTRIVLSHYERALEDSDKIIQLQPNNATAWLDRGFALGALNRYEEAIE 146

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----GHLTQF 560
             +  +KL  +N  A+    +AL+++  Y++A E   KA QL  +  E W      LT +
Sbjct: 147 SFNKVIKLQIDNADAWEESRVALATLTHYEEALENFNKAYQLQSDNTERWDIALATLTHY 206

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            ++       LE   +V+ +    ++A+  RG+ L  L + + AI+     + + P N E
Sbjct: 207 KEE-------LETFDKVIQLQPDNAEAWLGRGVALRALTRDEDAIEAFDKVIQLQPDNAE 259

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK-----FVLQCLAFYQKEIALY 671
             + R +    +  Y EAI+ +D  + L+ D+ E      + L  L  Y++ I  +
Sbjct: 260 AWHNRGNALSILTRYEEAIETFDKVIQLQPDNAETWNNQGYALNALTRYEEAIKAF 315



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 139/287 (48%), Gaps = 22/287 (7%)

Query: 339 SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYA 398
           SD+TE       +WD+   T    K   +    ++ + +  + +  L RG+A     +  
Sbjct: 190 SDNTE-------RWDIALATLTHYKEELE-TFDKVIQLQPDNAEAWLGRGVALRALTRDE 241

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
            AI  FD++++  P   EA   RG A +     E AI  F + IQ  P   E W  +G A
Sbjct: 242 DAIEAFDKVIQLQPDNAEAWHNRGNALSILTRYEEAIETFDKVIQLQPDNAETWNNQGYA 301

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
             AL    EAI+  +KA++ +P++A+I   RGI       +  A+E     ++   +  +
Sbjct: 302 LNALTRYEEAIKAFNKAVQLQPDNAEIWFNRGIALSNLARYQEAIESYDKAIQFKPDLAT 361

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKAL 571
           A++  G+AL     Y++A E+  KAIQ + +   AW        HL ++ + + + +KA+
Sbjct: 362 AWSSRGVALFHSARYEEAIESCDKAIQFNPDLANAWYNRGLALRHLVRYEEAIESYDKAI 421

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           EC          F+ A++ RG++L+ L ++K++++     + + P++
Sbjct: 422 EC-------KPDFADAWNNRGIVLNYLARYKESVESFDKVIQLKPND 461



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 4/240 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A     +Y  AI  FD++++  P   E    +G A       E AI  F +A+Q  
Sbjct: 263 NRGNALSILTRYEEAIETFDKVIQLQPDNAETWNNQGYALNALTRYEEAIKAFNKAVQLQ 322

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E W  RG A + L    EAI+   KA++F+P+ A     RG+  F    +  A+E 
Sbjct: 323 PDNAEIWFNRGIALSNLARYQEAIESYDKAIQFKPDLATAWSSRGVALFHSARYEEAIES 382

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++ + +  +A+   GLAL  +  Y++A E++ KAI+   +F +AW +       LA
Sbjct: 383 CDKAIQFNPDLANAWYNRGLALRHLVRYEEAIESYDKAIECKPDFADAWNNRGIVLNYLA 442

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGL---LLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
             ++++E   +V+ +    + A+   G+    L GL   K A +  +  L I P+++  L
Sbjct: 443 RYKESVESFDKVIQLKPNDALAWSNYGVSLWRLSGLPTTKIA-EVFARALAIQPNHLLAL 501



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 112/274 (40%), Gaps = 36/274 (13%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
            I    + IQ  P   EAW +RG A  AL    EAI+   K ++ +PN+ D   +RG   
Sbjct: 8   VIDTLDKVIQLQPDNAEAWLQRGSALIALSRYEEAIECFDKVIQLQPNNPDAWLQRGFAL 67

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
                + AA E+    VKL  +N  A+ Y G+    +  Y++A E   K IQL  N   A
Sbjct: 68  GVLTHYQAATENFDKTVKLQADNTKAWDYNGVTRIVLSHYERALEDSDKIIQLQPNNATA 127

Query: 554 WGHLTQFYQDLANSEKALECLQQV--LYID----------------------KRFSKAYH 589
           W         L   E+A+E   +V  L ID                      + F+KAY 
Sbjct: 128 WLDRGFALGALNRYEEAIESFNKVIKLQIDNADAWEESRVALATLTHYEEALENFNKAYQ 187

Query: 590 LRG-------LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
           L+        + L  L  +K+ ++     + + P N E    R     A+    +AI+ +
Sbjct: 188 LQSDNTERWDIALATLTHYKEELETFDKVIQLQPDNAEAWLGRGVALRALTRDEDAIEAF 247

Query: 643 DAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
           D  + L+ D+ E +      L  L  Y++ I  +
Sbjct: 248 DKVIQLQPDNAEAWHNRGNALSILTRYEEAIETF 281


>gi|113476015|ref|YP_722076.1| hypothetical protein Tery_2383 [Trichodesmium erythraeum IMS101]
 gi|110167063|gb|ABG51603.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 1421

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 126/254 (49%)

Query: 395  GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
            G   SAI+ F+  ++ +P Y +A    G  R  + ++  A+ +F  AIQ NP+  E    
Sbjct: 1146 GDILSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNN 1205

Query: 455  RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            RG  +   G+   A++D   A++  PN A+  +  G   F+  DF  A+ D    +++  
Sbjct: 1206 RGFTKFRRGDIPGAMKDFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIHP 1265

Query: 515  ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +   AY    LAL  +G++  A     +A++++  +  A+ +L   + ++ + E+A+   
Sbjct: 1266 KYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEMGDLEQAILDY 1325

Query: 575  QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
             +VL I  R   AY  RGL+   L  + +AIKD +S L I+P+       R+  Y  +GE
Sbjct: 1326 NEVLRIYPRKIDAYVNRGLIYLKLKNYTQAIKDQTSALNINPNLPHVYSFRSEGYIQLGE 1385

Query: 635  YREAIKDYDAALDL 648
            ++  I D   A ++
Sbjct: 1386 FKAGIDDLHKAAEI 1399



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 126/268 (47%)

Query: 381  VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            +D  + R I + + G +  A+   D  ++  P   EA   R   +    ++ +AI+DF  
Sbjct: 1098 IDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRANTKRSMGDILSAIADFEN 1157

Query: 441  AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            AI+ NP   +A+   G  R   G+   A+++   A++  PN A+  + RG   F+  D  
Sbjct: 1158 AIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNNRGFTKFRRGDIP 1217

Query: 501  AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
             A++D  A ++++     AY  LG +    G+++ A     + +++   ++ A+ +    
Sbjct: 1218 GAMKDFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIHPKYVPAYNNRALA 1277

Query: 561  YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
               L +   A     Q L I+ ++  AY+  GL+   +G  ++AI D +  L I P  I+
Sbjct: 1278 LLKLGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEMGDLEQAILDYNEVLRIYPRKID 1337

Query: 621  CLYLRASCYHAIGEYREAIKDYDAALDL 648
                R   Y  +  Y +AIKD  +AL++
Sbjct: 1338 AYVNRGLIYLKLKNYTQAIKDQTSALNI 1365



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 139/327 (42%), Gaps = 34/327 (10%)

Query: 371  TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            T++ +     VD    RGI +        AI+ F+  +K +P +PEA+  R   R   ++
Sbjct: 1020 TKVLQLHPRVVDAYTQRGIVRFEVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKD 1079

Query: 431  LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER- 489
             + ++ D  + IQ +P   +A+ +R   R  LG+   A++DL  A++ +PN+A+  ++R 
Sbjct: 1080 NQGSLDDLNKVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRA 1139

Query: 490  ---------------------------------GIVNFKFKDFNAAVEDLSACVKLDKEN 516
                                             GIV  +  D + A+E+  A ++++   
Sbjct: 1140 NTKRSMGDILSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPNY 1199

Query: 517  KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
               +   G      G+   A +    AIQ++ N+ EA+ +L        + + A+    +
Sbjct: 1200 AEGHNNRGFTKFRRGDIPGAMKDFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGE 1259

Query: 577  VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
             L I  ++  AY+ R L L  LG    A  D    L I+P      Y     +  +G+  
Sbjct: 1260 TLRIHPKYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEMGDLE 1319

Query: 637  EAIKDYDAALDLELDSMEKFVLQCLAF 663
            +AI DY+  L +    ++ +V + L +
Sbjct: 1320 QAILDYNEVLRIYPRKIDAYVNRGLIY 1346



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 132/269 (49%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            G+ +   G    AI+ ++Q +K +P  PEA   RG A  F    + A++DFT+ +Q +P 
Sbjct: 969  GVVRFKAGDKQGAIADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPR 1028

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              +A+ +RG  R  + +   AI D + A++  P   + ++ R I+    KD   +++DL+
Sbjct: 1029 VVDAYTQRGIVRFEVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLN 1088

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
              ++L  +   AY    +    +G+++ A +    A+QL  N  EA+       + + + 
Sbjct: 1089 KVIQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRANTKRSMGDI 1148

Query: 568  EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
              A+   +  + ++ ++ +AY+  G++    G    A+++  + + I+P+  E    R  
Sbjct: 1149 LSAIADFENAIRLNPKYHQAYNDMGIVRLRRGDISGAMENFEAAIQINPNYAEGHNNRGF 1208

Query: 628  CYHAIGEYREAIKDYDAALDLELDSMEKF 656
                 G+   A+KD++AA+ +  +  E +
Sbjct: 1209 TKFRRGDIPGAMKDFEAAIQINPNYAEAY 1237



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 138/295 (46%), Gaps = 7/295 (2%)

Query: 372  RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            ++ K +  +V+   ++G+ ++ +  +  AI  ++Q +  +         R  A A    L
Sbjct: 851  KVEKCRQEAVNVLHNQGLIKLQKRDHTGAIEDYNQAIFLEKNNYLLYHNRAIAIAQMGNL 910

Query: 432  EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
            + AI +F +A++  P   + +   G A   LGE  EAI+  S+AL+ +   + I    G+
Sbjct: 911  KGAIENFKKALELEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVDSQDSQIYQNLGV 970

Query: 492  VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
            V FK  D   A+ D +  +KL+     AY   G+A   +G  + A     K +QL    +
Sbjct: 971  VRFKAGDKQGAIADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPRVV 1030

Query: 552  EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            +A+        ++ + E A+      + ++ +  +A + R ++      ++ ++ DL+  
Sbjct: 1031 DAYTQRGIVRFEVKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLNKV 1090

Query: 612  LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            + + P  I+    R+     +G++  A+KD D+A+ L+ ++ E       A+YQ+
Sbjct: 1091 IQLHPKYIDAYIKRSIVRFDLGDHEGALKDLDSAVQLQPNNAE-------AYYQR 1138



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/419 (21%), Positives = 162/419 (38%), Gaps = 93/419 (22%)

Query: 323  TNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSN--------------------EA 362
             N   Y K  I +    ++    S+ + KW+ + + SN                    E 
Sbjct: 743  ANIGEYKKQKICEASQLEANFKWSEAAQKWEEIPDFSNAKRCWMKVPQKKAEYRAMELEK 802

Query: 363  KRN----------------KKFCVTR-----------------------ISKSKSISVDF 383
            KR                   FC  R                       + K +  +V+ 
Sbjct: 803  KRQWLKAAIEYDRAKIPQKAAFCRAREFEKKKQWKEAMTQYQIAAMSEKVEKCRQEAVNV 862

Query: 384  RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
              ++G+ ++ +  +  AI  ++Q +  +         R  A A    L+ AI +F +A++
Sbjct: 863  LHNQGLIKLQKRDHTGAIEDYNQAIFLEKNNYLLYHNRAIAIAQMGNLKGAIENFKKALE 922

Query: 444  SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
              P   + +   G A   LGE  EAI+  S+AL+ +   + I    G+V FK  D   A+
Sbjct: 923  LEPKDLQTYNNLGAAYVELGEFNEAIELFSQALKVDSQDSQIYQNLGVVRFKAGDKQGAI 982

Query: 504  EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--------- 554
             D +  +KL+     AY   G+A   +G  + A     K +QL    ++A+         
Sbjct: 983  ADYNQAIKLNPNKPEAYYNRGIAYRFLGHNQDAMNDFTKVLQLHPRVVDAYTQRGIVRFE 1042

Query: 555  -----GHLTQFYQDL--------------------ANSEKALECLQQVLYIDKRFSKAYH 589
                 G +  F   +                     +++ +L+ L +V+ +  ++  AY 
Sbjct: 1043 VKDIEGAIADFNDAIKLNPKHPEAIYNRAIIRRLTKDNQGSLDDLNKVIQLHPKYIDAYI 1102

Query: 590  LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             R ++   LG H+ A+KDL S + + P+N E  Y RA+   ++G+   AI D++ A+ L
Sbjct: 1103 KRSIVRFDLGDHEGALKDLDSAVQLQPNNAEAYYQRANTKRSMGDILSAIADFENAIRL 1161



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 7/205 (3%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG  +   G    A+  F+  ++ +P Y EA    G +R    + + A+ DF E ++ +
Sbjct: 1205 NRGFTKFRRGDIPGAMKDFEAAIQINPNYAEAYNNLGNSRFQTGDFQGAMRDFGETLRIH 1264

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    A+  R  A   LG+   A  D  +AL+  P      +  G+++ +  D   A+ D
Sbjct: 1265 PKYVPAYNNRALALLKLGDFSGATTDCYQALKINPKYGLAYYNLGLIHTEMGDLEQAILD 1324

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL-------EAWGHLT 558
             +  +++      AY   GL    +  Y +A +    A+ ++ N         E +  L 
Sbjct: 1325 YNEVLRIYPRKIDAYVNRGLIYLKLKNYTQAIKDQTSALNINPNLPHVYSFRSEGYIQLG 1384

Query: 559  QFYQDLANSEKALECLQQVLYIDKR 583
            +F   + +  KA E  QQ   +++R
Sbjct: 1385 EFKAGIDDLHKAAEIYQQQGKLEER 1409


>gi|239946448|ref|ZP_04698204.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239920724|gb|EER20751.1| tetratricopeptide TPR_2 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 375

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 151/285 (52%), Gaps = 5/285 (1%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  AI  +D+ +  +P Y +A   +G +     + E A+ ++ +AI+  P+   ++  
Sbjct: 61  GRYEEAIECYDKSISLNPEYADAYNNKGNSFFDLEKYEEALVEYDKAIELKPNDACSYYN 120

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G +   LG+  EAI++ +KA++ +P+  +  + +GI  +   ++  ++      ++L  
Sbjct: 121 KGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKP 180

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           ++   Y   G +L ++G+Y++A +A+ KAI+L+ N      +      DL   E+A++C 
Sbjct: 181 DDADIYNNKGTSLFNLGQYEEAIKAYNKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCY 240

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + ++   + +Y+ +G   + LG++++AIK+ +  + + P  +E  Y +    + IGE
Sbjct: 241 NQAIELNPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGE 300

Query: 635 YREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTAS 674
           Y E+I  Y+ A++L+ D  + +      L  L  Y++ I  Y  S
Sbjct: 301 YEESIIAYEKAIELKPDDADIYNNKGTSLFNLGEYEEAIKAYNKS 345



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 147/278 (52%), Gaps = 7/278 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  AI  +++ +K  P        +G + AF    E AI  + ++I  NP   +A+  
Sbjct: 27  GRYEEAIKEYNKAIKLKPDEDVLYYKKGNSLAFLGRYEEAIECYDKSISLNPEYADAYNN 86

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G +   L +  EA+ +  KA+E +PN A   + +G   +K   +  A+++ +  +KL  
Sbjct: 87  KGNSFFDLEKYEEALVEYDKAIELKPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKP 146

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   +Y   G++L +IGEY+++  A+ KAI+L  +  + + +      +L   E+A++  
Sbjct: 147 DYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGQYEEAIKAY 206

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + + ++   +   + +G  L  L ++++AIK  +  + ++P++    Y + + ++ +G+
Sbjct: 207 NKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCYNQAIELNPNDACSYYNKGNSFYKLGK 266

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYT 672
           Y EAIK+Y+ A+ L+ D +E       ++Y K I+LY 
Sbjct: 267 YEEAIKEYNKAIKLKPDYVE-------SYYNKGISLYN 297



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 124/257 (48%), Gaps = 34/257 (13%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  AI  +++ +K  P Y E+   +G +     E E +I  + +AI+  P   + +  
Sbjct: 129 GKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNN 188

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G +   LG+  EAI+  +KA+E  PN A +++ +G      + +  A++  +  ++L+ 
Sbjct: 189 KGTSLFNLGQYEEAIKAYNKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCYNQAIELNP 248

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +  +Y   G +   +G+Y++A + + KAI+L  +++E                      
Sbjct: 249 NDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVE---------------------- 286

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
                       +Y+ +G+ L+ +G+++++I      + + P + +    + +    +GE
Sbjct: 287 ------------SYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGE 334

Query: 635 YREAIKDYDAALDLELD 651
           Y EAIK Y+ +++L+ D
Sbjct: 335 YEEAIKAYNKSIELKPD 351



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 119/233 (51%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K K   V+   ++GI+  N G+Y  +I  +++ ++  P   +    +GT+     + E A
Sbjct: 143 KLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIYNNKGTSLFNLGQYEEA 202

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I  + +AI+ NP+       +G + + L +  EAI+  ++A+E  PN A   + +G   +
Sbjct: 203 IKAYNKAIELNPNDAVVINNKGTSLSDLEKYEEAIKCYNQAIELNPNDACSYYNKGNSFY 262

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           K   +  A+++ +  +KL  +   +Y   G++L +IGEY+++  A+ KAI+L  +  + +
Sbjct: 263 KLGKYEEAIKEYNKAIKLKPDYVESYYNKGISLYNIGEYEESIIAYEKAIELKPDDADIY 322

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +      +L   E+A++   + + +   F+ A + R +++  LG    A +D
Sbjct: 323 NNKGTSLFNLGEYEEAIKAYNKSIELKPDFAVAINNRTIVIEKLGSAGDATRD 375



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 99/204 (48%), Gaps = 34/204 (16%)

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           A + +   GQA A  G   EAI++ +KA++ +P+  D+L+ +                  
Sbjct: 12  AAKKYYDAGQALALRGRYEEAIKEYNKAIKLKPDE-DVLYYKK----------------- 53

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
                           G +L+ +G Y++A E + K+I L+  + +A+ +    + DL   
Sbjct: 54  ----------------GNSLAFLGRYEEAIECYDKSISLNPEYADAYNNKGNSFFDLEKY 97

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+AL    + + +    + +Y+ +G   + LG++++AIK+ +  + + P  +E  Y +  
Sbjct: 98  EEALVEYDKAIELKPNDACSYYNKGNSFYKLGKYEEAIKEYNKAIKLKPDYVESYYNKGI 157

Query: 628 CYHAIGEYREAIKDYDAALDLELD 651
             + IGEY E+I  Y+ A++L+ D
Sbjct: 158 SLYNIGEYEESIIAYEKAIELKPD 181



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L  L  + +AI   D  ++ + E  D  N +   +  LE ++  + + DKA++L P    
Sbjct: 57  LAFLGRYEEAIECYDKSISLNPEYADAYNNKGNSFFDLEKYEEALVEYDKAIELKPNDAC 116

Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
           +Y  KG +F  LG+ EEA+  + K 
Sbjct: 117 SYYNKGNSFYKLGKYEEAIKEYNKA 141


>gi|392411117|ref|YP_006447724.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
 gi|390624253|gb|AFM25460.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
          Length = 487

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 141/299 (47%), Gaps = 8/299 (2%)

Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           SK+I +D R+     +RG A    G+Y  AI  + + ++ +P Y  A   RG A   + +
Sbjct: 84  SKAIEIDPRMETALNNRGSAYYRLGEYDRAIKDYGRAIELNPGYGLAYYNRGNAYHGKGQ 143

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            E +I DF+ AIQ +P   + +  RG A   + E  ++I+D  +A++ +PN       RG
Sbjct: 144 FEKSIEDFSRAIQIDPRDKDVYNNRGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRG 203

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
               K  +   A++DLS  ++L+ E  +AY   G A    G   +A   + KA+++    
Sbjct: 204 NARLKSGNVEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPIL 263

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            + + +    +    N  +AL  + + + ++   SKAY  RG +   +G+  KA+ D   
Sbjct: 264 ADPYNNRGWVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKALPDFDR 323

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
            L +DPS       RA C  ++ +   A  D D A    LD     +L+ L    KEIA
Sbjct: 324 ALELDPSAAAIYVFRAECLLSMHQTDRARSDLDKA--YALDPTNPEILETLGSL-KEIA 379



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 142/295 (48%), Gaps = 2/295 (0%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            +++  ++  ++ D    RG++    GK   A+  + + ++ DP    AL  RG+A    
Sbjct: 48  LLSKAIRNGVLNSDVFFRRGVSHERLGKLNEAVQDYSKAIEIDPRMETALNNRGSAYYRL 107

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            E + AI D+  AI+ NP  G A+  RG A    G+  ++I+D S+A++ +P   D+ + 
Sbjct: 108 GEYDRAIKDYGRAIELNPGYGLAYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYNN 167

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG    +  + + ++ED    ++LD     AY   G A    G  + A +   +AI+L+ 
Sbjct: 168 RGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGNVEGAIQDLSRAIELNP 227

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            F  A+      Y      ++AL    + + I    +  Y+ RG +    G   +A++D+
Sbjct: 228 EFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPILADPYNNRGWVFFKKGNIAQALRDV 287

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL--QCL 661
           S  + ++P   +    R   + +IGE  +A+ D+D AL+L+  +   +V   +CL
Sbjct: 288 SKAVSLNPELSKAYTNRGWIHKSIGECPKALPDFDRALELDPSAAAIYVFRAECL 342



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 120/278 (43%), Gaps = 46/278 (16%)

Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           S++I +D R      +RG A +   +   +I  FD+ ++ DP Y  A   RG AR     
Sbjct: 152 SRAIQIDPRDKDVYNNRGWAYLQVNEIDKSIEDFDRAIQLDPNYVLAYANRGNARLKSGN 211

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           +E AI D + AI+ NP    A+ +RG A    G   EA+ D +KA+   P  AD  + RG
Sbjct: 212 VEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRISPILADPYNNRG 271

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            V FK  +   A+ D+S  V L+ E   AYT  G    SIGE  KA              
Sbjct: 272 WVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKA-------------- 317

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
                        L + ++ALE       +D   +  Y  R   L  + Q  +A  DL  
Sbjct: 318 -------------LPDFDRALE-------LDPSAAAIYVFRAECLLSMHQTDRARSDLDK 357

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              +DP+N E L         +G  +E   DY AAL++
Sbjct: 358 AYALDPTNPEIL-------ETLGSLKEIAGDYSAALEM 388



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 120/267 (44%), Gaps = 6/267 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A++  G    AI    + ++ +P +  A + RG A   +  L+ A++D+ +A++ +
Sbjct: 201 NRGNARLKSGNVEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGLLDEALNDYNKAVRIS 260

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   + +  RG      G   +A++D+SKA+   P  +     RG ++    +   A+ D
Sbjct: 261 PILADPYNNRGWVFFKKGNIAQALRDVSKAVSLNPELSKAYTNRGWIHKSIGECPKALPD 320

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLEAWGHLTQFYQ 562
               ++LD    + Y +    L S+ +  +A     KA  LD      LE  G L +   
Sbjct: 321 FDRALELDPSAAAIYVFRAECLLSMHQTDRARSDLDKAYALDPTNPEILETLGSLKEIAG 380

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           D +    ALE   +++ +    S A+   G+ L   G   +A+++ +  + +DP N E  
Sbjct: 381 DYS---AALEMFTKLVDLRPNDSAAHVDLGMALGKSGSLARAVEEFTRAIQLDPQNREAY 437

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLE 649
             R      +G+ + +  D+   L ++
Sbjct: 438 LRRGVARDLLGDKKGSRNDFTTGLQMK 464



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 110/236 (46%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           A I   + +I S   +GE      +    L E  +A+  LSKA+     ++D+   RG+ 
Sbjct: 10  AVIFLLSISIASAQESGEELFESAKMAQKLNEHAKAVDLLSKAIRNGVLNSDVFFRRGVS 69

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
           + +    N AV+D S  +++D   ++A    G A   +GEY +A + + +AI+L+  +  
Sbjct: 70  HERLGKLNEAVQDYSKAIEIDPRMETALNNRGSAYYRLGEYDRAIKDYGRAIELNPGYGL 129

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A+ +    Y      EK++E   + + ID R    Y+ RG     + +  K+I+D    +
Sbjct: 130 AYYNRGNAYHGKGQFEKSIEDFSRAIQIDPRDKDVYNNRGWAYLQVNEIDKSIEDFDRAI 189

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
            +DP+ +     R +     G    AI+D   A++L  +    ++ +  A+ +K +
Sbjct: 190 QLDPNYVLAYANRGNARLKSGNVEGAIQDLSRAIELNPEFATAYLQRGNAYVRKGL 245



 Score = 47.4 bits (111), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 48/94 (51%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y++A+ +F +++   P    A +  G A      L  A+ +FT AIQ +P   EA+ R
Sbjct: 380 GDYSAALEMFTKLVDLRPNDSAAHVDLGMALGKSGSLARAVEEFTRAIQLDPQNREAYLR 439

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           RG AR  LG+   +  D +  L+ +  ++  L +
Sbjct: 440 RGVARDLLGDKKGSRNDFTTGLQMKEETSPRLRQ 473



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 51/116 (43%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A S  D+    DP  PE L   G+ +    +  AA+  FT+ +   P+   A    G A 
Sbjct: 351 ARSDLDKAYALDPTNPEILETLGSLKEIAGDYSAALEMFTKLVDLRPNDSAAHVDLGMAL 410

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
              G    A+++ ++A++ +P + +    RG+      D   +  D +  +++ +E
Sbjct: 411 GKSGSLARAVEEFTRAIQLDPQNREAYLRRGVARDLLGDKKGSRNDFTTGLQMKEE 466



 Score = 39.7 bits (91), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 8/111 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +L +++KA+RI   +LA  Y      NR + + +       +RD  KA+ L+P L +AY 
Sbjct: 249 ALNDYNKAVRI-SPILADPYN-----NRGWVFFKKGNIAQALRDVSKAVSLNPELSKAYT 302

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRS 158
            +G    ++G   +AL  +++  E  L  SA        E LL+  + DR+
Sbjct: 303 NRGWIHKSIGECPKALPDFDRALE--LDPSAAAIYVFRAECLLSMHQTDRA 351


>gi|186682238|ref|YP_001865434.1| hypothetical protein Npun_R1829 [Nostoc punctiforme PCC 73102]
 gi|186464690|gb|ACC80491.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 539

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 128/234 (54%), Gaps = 4/234 (1%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K  S  ++    RG+     G Y +AI+ + Q ++ +    ++   RG A +    LE A
Sbjct: 273 KVTSSDINLYYKRGLTHYQIGDYEAAIADYSQAIQMNIQDAKSYNKRGLALSQLGRLEEA 332

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I+D+T+AI+ NP+   A+K R +AR+ +G++  AI+D ++A++  P+ AD    RGI  +
Sbjct: 333 INDYTQAIRINPNVAVAYKNRAEARSHIGDNQGAIEDYTQAIKINPHYADAYKNRGIARY 392

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
                 ++       +K++ ++  AY   G A S +G+++ A E + +AIQ++ N+ +A+
Sbjct: 393 LL----SSQPGFPQAIKINPKDAIAYKKRGNARSDLGDFEGAIEDYTQAIQINPNYADAY 448

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            +    + DL + E+A+E   Q + I+  ++ AY+ RG +   +   + AI+D 
Sbjct: 449 YNRDNAHSDLGDFERAIEDYTQAIQINYNYADAYYNRGNIRLEIADKQGAIEDF 502



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/252 (20%), Positives = 118/252 (46%), Gaps = 30/252 (11%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           +  F +   +N  +   + + G      GE   AI +  KAL+   +  ++ ++RG+ ++
Sbjct: 231 LKSFFQPEYNNEDSNTLYAKLGDEYFEKGEYTNAIVNYGKALKVTSSDINLYYKRGLTHY 290

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           +  D+ AA+ D S  ++++ ++  +Y   GLALS +G  ++A   + +AI+++ N   A+
Sbjct: 291 QIGDYEAAIADYSQAIQMNIQDAKSYNKRGLALSQLGRLEEAINDYTQAIRINPNVAVAY 350

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH------------------ 596
            +  +    + +++ A+E   Q + I+  ++ AY  RG+  +                  
Sbjct: 351 KNRAEARSHIGDNQGAIEDYTQAIKINPHYADAYKNRGIARYLLSSQPGFPQAIKINPKD 410

Query: 597 ------------GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
                        LG  + AI+D +  + I+P+  +  Y R + +  +G++  AI+DY  
Sbjct: 411 AIAYKKRGNARSDLGDFEGAIEDYTQAIQINPNYADAYYNRDNAHSDLGDFERAIEDYTQ 470

Query: 645 ALDLELDSMEKF 656
           A+ +  +  + +
Sbjct: 471 AIQINYNYADAY 482


>gi|34540729|ref|NP_905208.1| hypothetical protein PG0982 [Porphyromonas gingivalis W83]
 gi|34397043|gb|AAQ66107.1| TPR domain protein [Porphyromonas gingivalis W83]
          Length = 750

 Score =  110 bits (275), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 133/265 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+     G Y  AI  + + ++ D  +  A   RG A   +   E AI DF++AI+ +
Sbjct: 30  NRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAIELD 89

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                A+  RG A +  G   +AI+D S+A+E +       + RG+   +   +  A++D
Sbjct: 90  DKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEAIKD 149

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  ++LD +   AY   G A S  G YKKA + + +AI+LD  F  A+      Y +  
Sbjct: 150 YSKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYCEKG 209

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + E+A++   Q + +D +++ AYH RG      G +KKAIKD S  + +D   I     R
Sbjct: 210 SYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGR 269

Query: 626 ASCYHAIGEYREAIKDYDAALDLEL 650
              Y+ IG++ ++  D++  L L L
Sbjct: 270 GVAYYEIGDFEKSQADFNTVLYLIL 294



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 106/207 (51%)

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + N     A+  RG     +G   EAI+D SKA+E +       + RG+  FK   +  A
Sbjct: 19  EPNRQEAIAYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEA 78

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           ++D S  ++LD +   AY   G A S  G YKKA + + +AI+LD  ++  +      Y 
Sbjct: 79  IKDFSKAIELDDKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYC 138

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +  + E+A++   + + +D +++ AYH RG      G +KKAIKD S  + +D       
Sbjct: 139 EKGSYEEAIKDYSKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDGKFAHAY 198

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLE 649
           Y R + Y   G Y EAIKDY  A++L+
Sbjct: 199 YGRGNAYCEKGSYEEAIKDYSQAIELD 225



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 122/249 (48%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           A   RG         E AI D+++AI+ +     A+  RG A    G   EAI+D SKA+
Sbjct: 27  AYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKGSYEEAIKDFSKAI 86

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           E +       H RG    K   +  A++D S  ++LD +    Y   G+A    G Y++A
Sbjct: 87  ELDDKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRGVAYCEKGSYEEA 146

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
            + + KAI+LD  +  A+      Y      +KA++   Q + +D +F+ AY+ RG    
Sbjct: 147 IKDYSKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYC 206

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             G +++AIKD S  + +D       + R + Y   G Y++AIKDY  A++L+   +  +
Sbjct: 207 EKGSYEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGY 266

Query: 657 VLQCLAFYQ 665
             + +A+Y+
Sbjct: 267 NGRGVAYYE 275



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 75/144 (52%)

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           LS   + +++   AY   G+    +G Y++A + + KAI+LD  F+ A+ +    Y    
Sbjct: 14  LSNVPEPNRQEAIAYYNRGVGCYIVGSYEEAIKDYSKAIELDGKFIPAYYNRGVAYFKKG 73

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + E+A++   + + +D +F  AYH RG      G +KKAIKD S  + +D   I     R
Sbjct: 74  SYEEAIKDFSKAIELDDKFVHAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGR 133

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
              Y   G Y EAIKDY  A++L+
Sbjct: 134 GVAYCEKGSYEEAIKDYSKAIELD 157



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 5/142 (3%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           SK+I +D + +     RG A   +G Y  AI  + Q ++ D  +  A  GRG A   +  
Sbjct: 151 SKAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDGKFAHAYYGRGNAYCEKGS 210

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            E AI D+++AI+ +     A+  RG A +  G   +AI+D S+A+E +       + RG
Sbjct: 211 YEEAIKDYSQAIELDDKYAPAYHGRGNAYSKKGWYKKAIKDYSQAIELDDKYILGYNGRG 270

Query: 491 IVNFKFKDFNAAVEDLSACVKL 512
           +  ++  DF  +  D +  + L
Sbjct: 271 VAYYEIGDFEKSQADFNTVLYL 292


>gi|443313574|ref|ZP_21043185.1| TPR repeat-containing protein [Synechocystis sp. PCC 7509]
 gi|442776517|gb|ELR86799.1| TPR repeat-containing protein [Synechocystis sp. PCC 7509]
          Length = 289

 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 121/272 (44%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S+  +F   +G+ QV   KY +AI+ F + L+  P Y EAL  RG A       E AI+ 
Sbjct: 10  SLEAEFLFHQGVHQVKAEKYEAAIACFTRALRYKPDYSEALSQRGFALGSLGRHEDAIAS 69

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           F +A+   P A   W  RG A   LG  +EAI    +ALEF P+S+ + H RGI    + 
Sbjct: 70  FDKALMIRPDACWLWHNRGIALGKLGRYIEAINSFDRALEFNPDSSTVWHNRGITWSDYG 129

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
            F  A+      +KL      A+   G AL  +   ++A  +  ++I+   +    W H 
Sbjct: 130 VFEKAIASFDRALKLQPNAYWAWYNRGTALRQLQRGEEALNSFDRSIEFKPDGFLPWYHR 189

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                D    E A+    + L I    ++ ++  GL L  + +++ AI      L + P 
Sbjct: 190 GLILSDWGKHENAVASFHRALEIQPDCNRTWYNLGLNLGKIKRYEDAIAAFDRVLELKPD 249

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +    Y R      +G   EA   ++ A+ ++
Sbjct: 250 DYWGWYHRGVALEQVGRQEEADISHNKAIAIQ 281



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 7/188 (3%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           A+ L  +G+   K + + AA+   +  ++   +   A +  G AL S+G ++ A  +  K
Sbjct: 13  AEFLFHQGVHQVKAEKYEAAIACFTRALRYKPDYSEALSQRGFALGSLGRHEDAIASFDK 72

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           A+ +  +    W +       L    +A+    + L  +   S  +H RG+     G  +
Sbjct: 73  ALMIRPDACWLWHNRGIALGKLGRYIEAINSFDRALEFNPDSSTVWHNRGITWSDYGVFE 132

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           KAI      L + P+     Y R +    +    EA+  +D +++ + D         L 
Sbjct: 133 KAIASFDRALKLQPNAYWAWYNRGTALRQLQRGEEALNSFDRSIEFKPDGF-------LP 185

Query: 663 FYQKEIAL 670
           +Y + + L
Sbjct: 186 WYHRGLIL 193


>gi|434388288|ref|YP_007098899.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
 gi|428019278|gb|AFY95372.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
          Length = 1675

 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 172/412 (41%), Gaps = 21/412 (5%)

Query: 286 GPIDKASVNER-----HGRQTNGTHDVHDKLSSDSASLNDS--NTNSESYSKSSISDNKS 338
            P D ++ N+R     H  +     D + K +    SL+D+  N     +         S
Sbjct: 426 APKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQFKLGKFETAIS 485

Query: 339 SDSTESRSKLSF--KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVN 393
           S    +R    F   W+ L       +R +   +    ++  I   F     ++G+AQ +
Sbjct: 486 SYEQATRLYPEFYTAWNNLGVAQFHLQRYEA-AIASYERTLQIQPQFHQAWYNKGMAQFH 544

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
             +Y  A++ +D+ LK  P Y +A    G         E AIS +   ++ NP    AW 
Sbjct: 545 LSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTLKLNPEFYPAWY 604

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
             G   A  G   EAI+   KAL F+PN   + H RG    K +    A+      + + 
Sbjct: 605 NHGMTLAHQGRDAEAIESYDKALGFQPNDPYLWHSRGRALAKLERHAEALTCFDRSIDIL 664

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS-EKALE 572
            EN   +   G +L+++G Y  A E++ + +QL     E W H     Q L      ALE
Sbjct: 665 PENYEPWYDRGQSLAALGRYTTALESYDRTLQLRPKDPEIW-HSYGIVQGLRQEYTAALE 723

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + L I+  F ++++ RG  L  LG+H+ AI +    + I PS       +      +
Sbjct: 724 SYDRALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAILPSFAPASQGKGQSLFKL 783

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI---ALYT---ASKINS 678
             Y EAI  YD AL    DS + +  +  AF+  E    ALY+   A K+N+
Sbjct: 784 QRYAEAIASYDLALTTAPDSFDCWCQRGYAFWHLESWDEALYSYQQALKLNA 835



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 130/276 (47%), Gaps = 1/276 (0%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            G A+ + G++ +A++ + Q L+ +P   E    RG         E A+  +  A +S+P+
Sbjct: 1151 GKAEYHRGEFVAALAAYRQALELEPHRAETWYDRGYLLGQLERWEDALISYDRATESDPN 1210

Query: 448  AGEAWKRRGQARAALGE-SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW +RGQA+  L E   E +Q   +AL  +PN     +++G + F+     AAVE  
Sbjct: 1211 YALAWYQRGQAQFQLHEDPAENLQSYQRALTLDPNHPAAWYQQGNLLFQLGRLEAAVESY 1270

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               ++L  E+   +   G  L S+  Y  A E++ KA+ L   F ++W +  +    L  
Sbjct: 1271 ERALQLKPEDYYIWNNHGNVLGSLKRYDCAIESYDKALALKPEFYQSWHNRGKALFHLKR 1330

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             E+A    ++ L I    ++ ++ RG+ L  +G  ++A+      + ID  + +    R 
Sbjct: 1331 YEEAAAAHERSLEIHPHNAQIWNGRGMALQHIGCWQEALACYERSIEIDKLDPQVWLNRG 1390

Query: 627  SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            +    + +Y +AI  YD    L  D ++ +  + +A
Sbjct: 1391 TALFHLHKYEDAIACYDNCAILNPDELQAYHYRGIA 1426



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 4/257 (1%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+   A+  ++ + K  P   E    RG         + A++ +T+A    P    AW  
Sbjct: 376 GELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYTQATTLAPKDASAWND 435

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG+A   LG    A+    KA + EP+ +D  +  G   FK   F  A+       +L  
Sbjct: 436 RGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQFKLGKFETAISSYEQATRLYP 495

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
           E  +A+  LG+A   +  Y+ A  ++ + +Q+   F +AW +  + QF+  L+  ++AL 
Sbjct: 496 EFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQAWYNKGMAQFH--LSQYDRALA 553

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + L +   + +A++  G +L  LG++++AI   +  L ++P      Y         
Sbjct: 554 SYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTLKLNPEFYPAWYNHGMTLAHQ 613

Query: 633 GEYREAIKDYDAALDLE 649
           G   EAI+ YD AL  +
Sbjct: 614 GRDAEAIESYDKALGFQ 630



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 12/307 (3%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A   +  +  A+  +   ++  P +  A   +G    F  + EAA++ +T+  Q  P 
Sbjct: 301 GVAHFEQKSFQDALRCYRAAIELAPEFQAAWCNQGKVLFFLGDFEAALAAYTKVTQLQPD 360

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              AW   G     LGE   A++      + +P  A+    RG V         A+   +
Sbjct: 361 FDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYT 420

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL--TQFYQDLA 565
               L  ++ SA+   G A+  +G Y+ A + + KA QL+ +  +AW +L  TQF   L 
Sbjct: 421 QATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQF--KLG 478

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E A+   +Q   +   F  A++  G+    L +++ AI      L I P   +  Y +
Sbjct: 479 KFETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQAWYNK 538

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEK-----FVLQCLAFYQKEIALYTAS-KINSE 679
                 + +Y  A+  YD  L L+ D  +      FVL  L  Y++ I+ Y  + K+N E
Sbjct: 539 GMAQFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTLKLNPE 598

Query: 680 F--CWFD 684
           F   W++
Sbjct: 599 FYPAWYN 605



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 5/291 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S GI Q    +Y +A+  +D+ L  +P + ++   RG A A     E AI+++  AI   
Sbjct: 707 SYGIVQGLRQEYTAALESYDRALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAIL 766

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           PS   A + +GQ+   L    EAI     AL   P+S D   +RG   +  + ++ A+  
Sbjct: 767 PSFAPASQGKGQSLFKLQRYAEAIASYDLALTTAPDSFDCWCQRGYAFWHLESWDEALYS 826

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +KL+      + + G  L  +  Y +A   + +AI+L+     +W  L   +  L 
Sbjct: 827 YQQALKLNASAAIVWHFQGKTLLKLQRYAEALTVYERAIELNSEDYHSWNDLGLTFAHLG 886

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            SE A++  +Q + +   +  A+H  G  L  LG    A       +   P + +  Y  
Sbjct: 887 RSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGDTDGASAAYERAIAYHPQDADTWYGM 946

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
            +    +GE  EA+  Y+   +L+ D  E +      LQ L  +++ +  Y
Sbjct: 947 GNLLWQLGELSEAMFAYEQVTNLKPDRAEAWYRQGKALQALQQWERAVTCY 997



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 133/297 (44%), Gaps = 16/297 (5%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           PEA   +G      R+L+ A++ + + I+  P   EAW   G     LG   EA+    +
Sbjct: 90  PEAWYRQGNLYRDARKLDVALACYNKTIELQPHKQEAWANLGWVLVGLGRWEEALASYDR 149

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           ALE  P   +    RG V F+   +  A+E+    ++L+ E++ A+   G AL  +G Y 
Sbjct: 150 ALELRPEDGEAWANRGWVLFQLGYYQQAIENCECSIELNPEDRFAWYQKGRALFELGSYD 209

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           +A  A+ +A+++  +      +       +   + A  C +Q L+ID     A++  G +
Sbjct: 210 RALAAYDRALEISPDDSLTLSNKGWLLFHIGQVQAACGCYEQSLHIDPSDRFAWNNHGQV 269

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           L  LGQ + AI      L +D    +        +     +++A++ Y AA++L  +   
Sbjct: 270 LFQLGQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKSFQDALRCYRAAIELAPEFQA 329

Query: 655 KF-----VLQCLAFYQKEIALYT-ASKINSEF--CW-------FDIDGDIDPLFKEY 696
            +     VL  L  ++  +A YT  +++  +F   W       F + G+++P  + Y
Sbjct: 330 AWCNQGKVLFFLGDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHL-GELEPALRRY 385



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 5/290 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G   V  G++  A++ +D+ L+  P   EA   RG         + AI +   +I+ NP 
Sbjct: 131 GWVLVGLGRWEEALASYDRALELRPEDGEAWANRGWVLFQLGYYQQAIENCECSIELNPE 190

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              AW ++G+A   LG    A+    +ALE  P+ +  L  +G + F      AA     
Sbjct: 191 DRFAWYQKGRALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLLFHIGQVQAACGCYE 250

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + +D  ++ A+   G  L  +G+ + A +A+ KA++LD  F +AW +L   + +  + 
Sbjct: 251 QSLHIDPSDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKSF 310

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           + AL C +  + +   F  A+  +G +L  LG  + A+   +    + P          +
Sbjct: 311 QDALRCYRAAIELAPEFQAAWCNQGKVLFFLGDFEAALAAYTKVTQLQPDFDRAWNYCGN 370

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT 672
               +GE   A++ Y+    L+    E +     VL  L   Q+ +  YT
Sbjct: 371 ILFHLGELEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYT 420



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 115/263 (43%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A    G Y  A++ +D+ L+  P     L  +G       +++AA   + +++  +P
Sbjct: 198 KGRALFELGSYDRALAAYDRALEISPDDSLTLSNKGWLLFHIGQVQAACGCYEQSLHIDP 257

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S   AW   GQ    LG+   AI    KALE +       +  G+ +F+ K F  A+   
Sbjct: 258 SDRFAWNNHGQVLFQLGQIRAAIDAYQKALELDSQFYQAWNNLGVAHFEQKSFQDALRCY 317

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            A ++L  E ++A+   G  L  +G+++ A  A+ K  QL  +F  AW +       L  
Sbjct: 318 RAAIELAPEFQAAWCNQGKVLFFLGDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGE 377

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E AL   + V  +  + ++ +  RG +L  L + ++A+   +    + P +      R 
Sbjct: 378 LEPALRRYEMVTKLQPQLAEGWSNRGNVLLLLDRPQEALTCYTQATTLAPKDASAWNDRG 437

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
                +G Y  A+  Y  A  LE
Sbjct: 438 KAMFHLGRYEHALDCYRKATQLE 460



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 112/257 (43%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A++ + Q     P    A   RG A       E A+  + +A Q  PS  +AW   G+ +
Sbjct: 415 ALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKATQLEPSLSDAWNNLGKTQ 474

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             LG+   AI    +A    P      +  G+  F  + + AA+      +++  +   A
Sbjct: 475 FKLGKFETAISSYEQATRLYPEFYTAWNNLGVAQFHLQRYEAAIASYERTLQIQPQFHQA 534

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +   G+A   + +Y +A  ++ + ++L  ++ +AW +L      L   E+A+      L 
Sbjct: 535 WYNKGMAQFHLSQYDRALASYDRTLKLKPDYYQAWNNLGFVLFHLGRYEEAISSYNHTLK 594

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           ++  F  A++  G+ L   G+  +AI+     LG  P++    + R      +  + EA+
Sbjct: 595 LNPEFYPAWYNHGMTLAHQGRDAEAIESYDKALGFQPNDPYLWHSRGRALAKLERHAEAL 654

Query: 640 KDYDAALDLELDSMEKF 656
             +D ++D+  ++ E +
Sbjct: 655 TCFDRSIDILPENYEPW 671



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 129/272 (47%), Gaps = 3/272 (1%)

Query: 375 KSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           ++ +I+ +F  S   RG A    G++  AI+ +D+ +   P +  A  G+G +    +  
Sbjct: 727 RALAINPNFYQSWYERGNALAELGRHEYAITNYDRAIAILPSFAPASQGKGQSLFKLQRY 786

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             AI+ +  A+ + P + + W +RG A   L    EA+    +AL+   ++A + H +G 
Sbjct: 787 AEAIASYDLALTTAPDSFDCWCQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHFQGK 846

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
              K + +  A+      ++L+ E+  ++  LGL  + +G  + A +++ +AI+L  ++ 
Sbjct: 847 TLLKLQRYAEALTVYERAIELNSEDYHSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYH 906

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            AW +L +    L +++ A    ++ +    + +  ++  G LL  LG+  +A+      
Sbjct: 907 PAWHNLGKELTQLGDTDGASAAYERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQV 966

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
             + P   E  Y +     A+ ++  A+  Y+
Sbjct: 967 TNLKPDRAEAWYRQGKALQALQQWERAVTCYE 998



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 124/284 (43%), Gaps = 5/284 (1%)

Query: 369  CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            C  R++   + S D   S G       ++  A++ ++  L  +    +A   +G   A  
Sbjct: 996  CYERVTTLTNPSYDLCYSHGQVLTKLNRHQEALACYELALTLNKNAADAWYAKGQTLAAL 1055

Query: 429  RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
               E A S +  A+  +P        + + +AA G+   A+    +A+E +P++ +I  +
Sbjct: 1056 NRWEDANSCYERALSLDPQNQSILYNQSRVQAAQGDWETALVACCQAIELDPDNPEIWTQ 1115

Query: 489  RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
             G ++ +  ++N AV  L     +  E+  ++  LG A    GE+  A  A+ +A++L+ 
Sbjct: 1116 HGQISIELGNYNTAVASLQTATGIAPESARSWALLGKAEYHRGEFVAALAAYRQALELEP 1175

Query: 549  NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            +  E W         L   E AL    +    D  ++ A++ RG     L  H+   ++L
Sbjct: 1176 HRAETWYDRGYLLGQLERWEDALISYDRATESDPNYALAWYQRGQAQFQL--HEDPAENL 1233

Query: 609  SS---GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             S    L +DP++    Y + +    +G    A++ Y+ AL L+
Sbjct: 1234 QSYQRALTLDPNHPAAWYQQGNLLFQLGRLEAAVESYERALQLK 1277



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 14/266 (5%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
             RG+A  + G +  A++ +++ ++ D + P+  + RGTA     + E AI+ +      N
Sbjct: 1354 GRGMALQHIGCWQEALACYERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNCAILN 1413

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P   +A+  RG A   LG    A+    +AL   P + D   +R             V  
Sbjct: 1414 PDELQAYHYRGIASLELGRWDAAVASFDRALTLSP-ALDEPEDR-------------VRS 1459

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             S  V       S +   G AL  +G  + A  ++ +A ++       W +    + +L 
Sbjct: 1460 QSVPVGKSPLTASTWNSRGTALFQLGNLEGALHSYRQATKVAPEDPLGWTNQGATHLNLQ 1519

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
               +AL+C Q  L ID   +  ++ + +    LG+   AI  L+  + IDP  I   Y R
Sbjct: 1520 QYAEALQCYQTSLKIDANDAATWYKQAISQQALGRLDAAIISLTKAVEIDPQFILARYRR 1579

Query: 626  ASCYHAIGEYREAIKDYDAALDLELD 651
             + Y    E+  A+ DY+  L+L+ D
Sbjct: 1580 GNIYLLQREFEAALTDYEVTLNLDPD 1605



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 90/220 (40%)

Query: 398  ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
            A  +  + + L  DP +P A   +G        LEAA+  +  A+Q  P     W   G 
Sbjct: 1230 AENLQSYQRALTLDPNHPAAWYQQGNLLFQLGRLEAAVESYERALQLKPEDYYIWNNHGN 1289

Query: 458  ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
               +L     AI+   KAL  +P      H RG   F  K +  A       +++   N 
Sbjct: 1290 VLGSLKRYDCAIESYDKALALKPEFYQSWHNRGKALFHLKRYEEAAAAHERSLEIHPHNA 1349

Query: 518  SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
              +   G+AL  IG +++A   + ++I++D+   + W +       L   E A+ C    
Sbjct: 1350 QIWNGRGMALQHIGCWQEALACYERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNC 1409

Query: 578  LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              ++    +AYH RG+    LG+   A+      L + P+
Sbjct: 1410 AILNPDELQAYHYRGIASLELGRWDAAVASFDRALTLSPA 1449



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 113/276 (40%), Gaps = 3/276 (1%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           IS   S+++    ++G    + G+  +A   ++Q L  DP    A    G       ++ 
Sbjct: 221 ISPDDSLTLS---NKGWLLFHIGQVQAACGCYEQSLHIDPSDRFAWNNHGQVLFQLGQIR 277

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           AAI  + +A++ +    +AW   G A        +A++    A+E  P        +G V
Sbjct: 278 AAIDAYQKALELDSQFYQAWNNLGVAHFEQKSFQDALRCYRAAIELAPEFQAAWCNQGKV 337

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
            F   DF AA+   +   +L  +   A+ Y G  L  +GE + A   +    +L     E
Sbjct: 338 LFFLGDFEAALAAYTKVTQLQPDFDRAWNYCGNILFHLGELEPALRRYEMVTKLQPQLAE 397

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            W +       L   ++AL C  Q   +  + + A++ RG  +  LG+++ A+       
Sbjct: 398 GWSNRGNVLLLLDRPQEALTCYTQATTLAPKDASAWNDRGKAMFHLGRYEHALDCYRKAT 457

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            ++PS  +           +G++  AI  Y+ A  L
Sbjct: 458 QLEPSLSDAWNNLGKTQFKLGKFETAISSYEQATRL 493



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/285 (19%), Positives = 116/285 (40%), Gaps = 3/285 (1%)

Query: 367  KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
            ++ +T   ++ +I   F  +   +G +     +YA AI+ +D  L   P   +    RG 
Sbjct: 753  EYAITNYDRAIAILPSFAPASQGKGQSLFKLQRYAEAIASYDLALTTAPDSFDCWCQRGY 812

Query: 424  ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
            A       + A+  + +A++ N SA   W  +G+    L    EA+    +A+E      
Sbjct: 813  AFWHLESWDEALYSYQQALKLNASAAIVWHFQGKTLLKLQRYAEALTVYERAIELNSEDY 872

Query: 484  DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
               ++ G+          A++     ++L  +   A+  LG  L+ +G+   A  A+ +A
Sbjct: 873  HSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGDTDGASAAYERA 932

Query: 544  IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
            I       + W  +      L    +A+   +QV  +    ++A++ +G  L  L Q ++
Sbjct: 933  IAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRAEAWYRQGKALQALQQWER 992

Query: 604  AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            A+        +   + +  Y        +  ++EA+  Y+ AL L
Sbjct: 993  AVTCYERVTTLTNPSYDLCYSHGQVLTKLNRHQEALACYELALTL 1037



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/271 (22%), Positives = 112/271 (41%), Gaps = 2/271 (0%)

Query: 380  SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDF 438
            S D    RG A  +   +  A+  + Q LK +         +G T    QR  EA ++ +
Sbjct: 803  SFDCWCQRGYAFWHLESWDEALYSYQQALKLNASAAIVWHFQGKTLLKLQRYAEA-LTVY 861

Query: 439  TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
              AI+ N     +W   G   A LG S +AI    +A+E +P+     H  G    +  D
Sbjct: 862  ERAIELNSEDYHSWNDLGLTFAHLGRSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGD 921

Query: 499  FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
             + A       +    ++   +  +G  L  +GE  +A  A+ +   L  +  EAW    
Sbjct: 922  TDGASAAYERAIAYHPQDADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRAEAWYRQG 981

Query: 559  QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            +  Q L   E+A+ C ++V  +        +  G +L  L +H++A+      L ++ + 
Sbjct: 982  KALQALQQWERAVTCYERVTTLTNPSYDLCYSHGQVLTKLNRHQEALACYELALTLNKNA 1041

Query: 619  IECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             +  Y +     A+  + +A   Y+ AL L+
Sbjct: 1042 ADAWYAKGQTLAALNRWEDANSCYERALSLD 1072



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/300 (21%), Positives = 115/300 (38%), Gaps = 20/300 (6%)

Query: 369  CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            C  R  +   +     L+RG A  +  KY  AI+ +D     +P   +A   RG A    
Sbjct: 1371 CYERSIEIDKLDPQVWLNRGTALFHLHKYEDAIACYDNCAILNPDELQAYHYRGIASLEL 1430

Query: 429  RELEAAISDFTEAIQSNPSAGE--------------------AWKRRGQARAALGESVEA 468
               +AA++ F  A+  +P+  E                     W  RG A   LG    A
Sbjct: 1431 GRWDAAVASFDRALTLSPALDEPEDRVRSQSVPVGKSPLTASTWNSRGTALFQLGNLEGA 1490

Query: 469  IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
            +    +A +  P        +G  +   + +  A++     +K+D  + + +    ++  
Sbjct: 1491 LHSYRQATKVAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLKIDANDAATWYKQAISQQ 1550

Query: 529  SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            ++G    A  +  KA+++D  F+ A       Y      E AL   +  L +D   + A+
Sbjct: 1551 ALGRLDAAIISLTKAVEIDPQFILARYRRGNIYLLQREFEAALTDYEVTLNLDPDRAAAW 1610

Query: 589  HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            + RG  L  L     A+       G++P N E  + +   + ++ ++ EA   Y  A  L
Sbjct: 1611 NSRGNCLLELKILDNALFSFQQATGLEPENSEYWFNQGRAHSSLQQWEEAENCYQQARSL 1670



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 84/198 (42%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            SRG A    G    A+  + Q  K  P  P     +G      ++   A+  +  +++ +
Sbjct: 1476 SRGTALFQLGNLEGALHSYRQATKVAPEDPLGWTNQGATHLNLQQYAEALQCYQTSLKID 1535

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
             +    W ++  ++ ALG    AI  L+KA+E +P      + RG +    ++F AA+ D
Sbjct: 1536 ANDAATWYKQAISQQALGRLDAAIISLTKAVEIDPQFILARYRRGNIYLLQREFEAALTD 1595

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                + LD +  +A+   G  L  +     A  +  +A  L+    E W +  + +  L 
Sbjct: 1596 YEVTLNLDPDRAAAWNSRGNCLLELKILDNALFSFQQATGLEPENSEYWFNQGRAHSSLQ 1655

Query: 566  NSEKALECLQQVLYIDKR 583
              E+A  C QQ   + +R
Sbjct: 1656 QWEEAENCYQQARSLTQR 1673



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 55/279 (19%), Positives = 104/279 (37%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            G+   + G+   AI  + Q ++  P Y  A    G       + + A + +  AI  +P 
Sbjct: 879  GLTFAHLGRSEDAIDSYRQAIELQPDYHPAWHNLGKELTQLGDTDGASAAYERAIAYHPQ 938

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              + W   G     LGE  EA+    +    +P+ A+  + +G      + +  AV    
Sbjct: 939  DADTWYGMGNLLWQLGELSEAMFAYEQVTNLKPDRAEAWYRQGKALQALQQWERAVTCYE 998

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
                L   +       G  L+ +  +++A   +  A+ L++N  +AW    Q    L   
Sbjct: 999  RVTTLTNPSYDLCYSHGQVLTKLNRHQEALACYELALTLNKNAADAWYAKGQTLAALNRW 1058

Query: 568  EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
            E A  C ++ L +D +     + +  +    G  + A+      + +DP N E       
Sbjct: 1059 EDANSCYERALSLDPQNQSILYNQSRVQAAQGDWETALVACCQAIELDPDNPEIWTQHGQ 1118

Query: 628  CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
                +G Y  A+     A  +  +S   + L   A Y +
Sbjct: 1119 ISIELGNYNTAVASLQTATGIAPESARSWALLGKAEYHR 1157


>gi|334121332|ref|ZP_08495403.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333455148|gb|EGK83806.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1075

 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 124/264 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+ +   G    AI+ F++ L+ DP +  A  G G           AI+ F +A++ +
Sbjct: 187 NQGVERYYAGNLKGAIAAFEKALEIDPKFHHAWNGLGAPLNDLGRNSEAIAAFEKALEID 246

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW   G    ALG + EAI    KALE +P      H  GI        + A+  
Sbjct: 247 PKEHIAWHGLGITLNALGRNSEAIAAFEKALEIDPKEHIAWHGLGITLNALGRNSEAIAA 306

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++D +   A+  LG AL+++G   +A  A  KA+++D  F  AW  L     DL 
Sbjct: 307 FEKALEIDPKAHIAWKGLGNALNALGRNSEAIAAFKKALEIDPKFHHAWNGLGAPLNDLG 366

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +A+   ++ L ID +F  A+H  G +L+ LG++ +AI      L IDP         
Sbjct: 367 RYSEAIAAFEKALEIDPKFHFAWHGLGNVLNALGRYSEAIAVYEKALEIDPKFHFAWNGL 426

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
            +    +G Y EAI  Y+ AL+++
Sbjct: 427 GNALGELGRYSEAIAAYEKALEID 450



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 150/332 (45%), Gaps = 7/332 (2%)

Query: 341 STESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKY 397
           + E   K    W+ L    N+  RN +  +    K+  I     ++    GI     G+ 
Sbjct: 208 ALEIDPKFHHAWNGLGAPLNDLGRNSE-AIAAFEKALEIDPKEHIAWHGLGITLNALGRN 266

Query: 398 ASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           + AI+ F++ L+ DP    A  G G T  A  R  EA I+ F +A++ +P A  AWK  G
Sbjct: 267 SEAIAAFEKALEIDPKEHIAWHGLGITLNALGRNSEA-IAAFEKALEIDPKAHIAWKGLG 325

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            A  ALG + EAI    KALE +P      +  G        ++ A+      +++D + 
Sbjct: 326 NALNALGRNSEAIAAFKKALEIDPKFHHAWNGLGAPLNDLGRYSEAIAAFEKALEIDPKF 385

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A+  LG  L+++G Y +A   + KA+++D  F  AW  L     +L    +A+   ++
Sbjct: 386 HFAWHGLGNVLNALGRYSEAIAVYEKALEIDPKFHFAWNGLGNALGELGRYSEAIAAYEK 445

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI-ECLYLRASCYHAIGEY 635
            L ID +F  A++  G    GLG++ +AI      L I  +   +    R S    +G Y
Sbjct: 446 ALEIDPKFHIAWNGLGSARRGLGRNSEAIAAFDKALEITGNQFWQAWANRGSALFYLGRY 505

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
            EAI+++D  L     S   +   C   +Q++
Sbjct: 506 SEAIQNWDEGLQKYQPSNRDYRFACGTLHQRK 537



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 139/317 (43%), Gaps = 15/317 (4%)

Query: 308 HDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKK 367
           H   +   A LND   NSE+ +           + E   K    W  L  T N   RN +
Sbjct: 216 HHAWNGLGAPLNDLGRNSEAIAAFE-------KALEIDPKEHIAWHGLGITLNALGRNSE 268

Query: 368 FCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
             +    K+  I     ++    GI     G+ + AI+ F++ L+ DP    A  G G A
Sbjct: 269 -AIAAFEKALEIDPKEHIAWHGLGITLNALGRNSEAIAAFEKALEIDPKAHIAWKGLGNA 327

Query: 425 -RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
             A  R  EA I+ F +A++ +P    AW   G     LG   EAI    KALE +P   
Sbjct: 328 LNALGRNSEA-IAAFKKALEIDPKFHHAWNGLGAPLNDLGRYSEAIAAFEKALEIDPKFH 386

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
              H  G V      ++ A+      +++D +   A+  LG AL  +G Y +A  A+ KA
Sbjct: 387 FAWHGLGNVLNALGRYSEAIAVYEKALEIDPKFHFAWNGLGNALGELGRYSEAIAAYEKA 446

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI-DKRFSKAYHLRGLLLHGLGQHK 602
           +++D  F  AW  L    + L  + +A+    + L I   +F +A+  RG  L  LG++ 
Sbjct: 447 LEIDPKFHIAWNGLGSARRGLGRNSEAIAAFDKALEITGNQFWQAWANRGSALFYLGRYS 506

Query: 603 KAIKDLSSGL-GIDPSN 618
           +AI++   GL    PSN
Sbjct: 507 EAIQNWDEGLQKYQPSN 523


>gi|298492898|ref|YP_003723075.1| hypothetical protein Aazo_4774 ['Nostoc azollae' 0708]
 gi|298234816|gb|ADI65952.1| TPR repeat-containing protein ['Nostoc azollae' 0708]
          Length = 371

 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 140/286 (48%), Gaps = 15/286 (5%)

Query: 370 VTRISKSKSI---SVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           VT+I K+ +    +++F L+     RG+A    G   SA++  ++ LK  P +  A   R
Sbjct: 63  VTKILKNSAKLAGNINFYLAKAFHNRGLAAFQCGDDQSAVTDINEALKFYPEFIAAYSNR 122

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G       +   AISD+ +AIQ NP    A+  RG +R AL +   AI D ++ALE  PN
Sbjct: 123 GNILHILGKYTEAISDYNQAIQLNPHLAAAYHNRGNSRYALQDYQGAIADYNQALEINPN 182

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
             +  + RG+V    +D+  A+ D +  ++ D E+  AY   GL   ++ +Y+ A + + 
Sbjct: 183 FGEAYYNRGLVMSHLQDYQGAIADFNQAIQQDPEDIQAYLERGLIYRTLQDYENAIQDYN 242

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           + +Q++      +G      +   N + A+  + ++L ++    + Y  R +    LG +
Sbjct: 243 QVLQINPTLPTVYGLRANARRHQKNHQGAIADINKLLQLNPHLVEGYCDRAVSRRFLGDY 302

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
             A+ D +  L I+P+        A+ Y+A GE  +  +D  AA+D
Sbjct: 303 NGALADYNRALQINPN-------LAAAYYARGEIYQHFRDIPAAID 341



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 122/254 (48%), Gaps = 25/254 (9%)

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
           M  E LI +G  +    + E AI+ F EAIQ N +  EA+  RG +   L E  +AI D 
Sbjct: 1   MNGEQLIKQGVQKNLYGDYEGAITVFNEAIQLNCNLAEAYYHRGYSCLELAEFNQAIADY 60

Query: 473 SKALEFEPNSADI-----------LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
            +  +   NSA +            H RG+  F+  D  +AV D++  +K   E  +AY+
Sbjct: 61  QQVTKILKNSAKLAGNINFYLAKAFHNRGLAAFQCGDDQSAVTDINEALKFYPEFIAAYS 120

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ------ 575
             G  L  +G+Y +A   + +AIQL+        HL   Y +  NS  AL+  Q      
Sbjct: 121 NRGNILHILGKYTEAISDYNQAIQLNP-------HLAAAYHNRGNSRYALQDYQGAIADY 173

Query: 576 -QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q L I+  F +AY+ RGL++  L  ++ AI D +  +  DP +I+    R   Y  + +
Sbjct: 174 NQALEINPNFGEAYYNRGLVMSHLQDYQGAIADFNQAIQQDPEDIQAYLERGLIYRTLQD 233

Query: 635 YREAIKDYDAALDL 648
           Y  AI+DY+  L +
Sbjct: 234 YENAIQDYNQVLQI 247



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 2/234 (0%)

Query: 416 EALIGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           +A   RG A AFQ  + ++A++D  EA++  P    A+  RG     LG+  EAI D ++
Sbjct: 83  KAFHNRGLA-AFQCGDDQSAVTDINEALKFYPEFIAAYSNRGNILHILGKYTEAISDYNQ 141

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A++  P+ A   H RG   +  +D+  A+ D +  ++++     AY   GL +S + +Y+
Sbjct: 142 AIQLNPHLAAAYHNRGNSRYALQDYQGAIADYNQALEINPNFGEAYYNRGLVMSHLQDYQ 201

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
            A     +AIQ D   ++A+      Y+ L + E A++   QVL I+      Y LR   
Sbjct: 202 GAIADFNQAIQQDPEDIQAYLERGLIYRTLQDYENAIQDYNQVLQINPTLPTVYGLRANA 261

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
                 H+ AI D++  L ++P  +E    RA     +G+Y  A+ DY+ AL +
Sbjct: 262 RRHQKNHQGAIADINKLLQLNPHLVEGYCDRAVSRRFLGDYNGALADYNRALQI 315



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 14/174 (8%)

Query: 361 EAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQI 407
           EA  N+   ++ +   +    DF              L RG+       Y +AI  ++Q+
Sbjct: 185 EAYYNRGLVMSHLQDYQGAIADFNQAIQQDPEDIQAYLERGLIYRTLQDYENAIQDYNQV 244

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           L+ +P  P     R  AR  Q+  + AI+D  + +Q NP   E +  R  +R  LG+   
Sbjct: 245 LQINPTLPTVYGLRANARRHQKNHQGAIADINKLLQLNPHLVEGYCDRAVSRRFLGDYNG 304

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSAY 520
           A+ D ++AL+  PN A   + RG +   F+D  AA++D      L D+E    Y
Sbjct: 305 ALADYNRALQINPNLAAAYYARGEIYQHFRDIPAAIDDFQKSANLFDQEGNKLY 358



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/108 (24%), Positives = 51/108 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R  A+ ++  +  AI+  +++L+ +P   E    R  +R F  +   A++D+  A+Q NP
Sbjct: 258 RANARRHQKNHQGAIADINKLLQLNPHLVEGYCDRAVSRRFLGDYNGALADYNRALQINP 317

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           +   A+  RG+      +   AI D  K+        + L+ + I+N 
Sbjct: 318 NLAAAYYARGEIYQHFRDIPAAIDDFQKSANLFDQEGNKLYYQEIINL 365


>gi|254413697|ref|ZP_05027466.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196179294|gb|EDX74289.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 320

 Score =  109 bits (273), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 65/228 (28%), Positives = 123/228 (53%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           R+ E AI  + +AIQ+ P+   ++  RG    AL +  E +Q+ + AL+  P+     + 
Sbjct: 33  RQYEQAIEIYNKAIQAYPNLALSYYNRGNCFFALNDYQEVLQNYNDALKLNPSYPQAYNN 92

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG   +   D++ A+ D +  VK + + + AY   G A  ++ EYK+A      AIQL+ 
Sbjct: 93  RGNTYYLLGDYHQAIADYTQAVKCNPKYERAYYNRGNAYYNLSEYKQALLDFSYAIQLNP 152

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           ++ E++ +L   Y  L   ++A++   + + I+  +++AY+ RG   + L    +AI + 
Sbjct: 153 DYAESYNNLGNTYIALNQYQQAIDSYDKAIAINPNYAQAYNNRGNSYYYLNNVVQAISNY 212

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           +  + +D  N E    R + Y+A+ +Y+EA+K+YD AL L  + +E +
Sbjct: 213 AKAITLDSQNHEAYNNRGNAYYALQKYKEALKNYDQALTLCPNHIESY 260



 Score =  104 bits (259), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 61/253 (24%), Positives = 130/253 (51%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI I+++ ++  P    +   RG       + +  + ++ +A++ NPS  +A+  R
Sbjct: 34  QYEQAIEIYNKAIQAYPNLALSYYNRGNCFFALNDYQEVLQNYNDALKLNPSYPQAYNNR 93

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     LG+  +AI D ++A++  P      + RG   +   ++  A+ D S  ++L+ +
Sbjct: 94  GNTYYLLGDYHQAIADYTQAVKCNPKYERAYYNRGNAYYNLSEYKQALLDFSYAIQLNPD 153

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              +Y  LG    ++ +Y++A +++ KAI ++ N+ +A+ +    Y  L N  +A+    
Sbjct: 154 YAESYNNLGNTYIALNQYQQAIDSYDKAIAINPNYAQAYNNRGNSYYYLNNVVQAISNYA 213

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + +D +  +AY+ RG   + L ++K+A+K+    L + P++IE  Y R      + + 
Sbjct: 214 KAITLDSQNHEAYNNRGNAYYALQKYKEALKNYDQALTLCPNHIESYYNRGLVQIKLKQK 273

Query: 636 REAIKDYDAALDL 648
           ++AI D   A+ L
Sbjct: 274 QKAIADLQQAVKL 286



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 93/189 (49%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI+ + Q +K +P Y  A   RG A     E + A+ DF+ AIQ NP   E++  
Sbjct: 101 GDYHQAIADYTQAVKCNPKYERAYYNRGNAYYNLSEYKQALLDFSYAIQLNPDYAESYNN 160

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            G    AL +  +AI    KA+   PN A   + RG   +   +   A+ + +  + LD 
Sbjct: 161 LGNTYIALNQYQQAIDSYDKAIAINPNYAQAYNNRGNSYYYLNNVVQAISNYAKAITLDS 220

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +N  AY   G A  ++ +YK+A + + +A+ L  N +E++ +       L   +KA+  L
Sbjct: 221 QNHEAYNNRGNAYYALQKYKEALKNYDQALTLCPNHIESYYNRGLVQIKLKQKQKAIADL 280

Query: 575 QQVLYIDKR 583
           QQ + + ++
Sbjct: 281 QQAVKLAQQ 289



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 100/211 (47%), Gaps = 12/211 (5%)

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
           L   LE++ N A   + +    ++ + +  A+E  +  ++       +Y   G    ++ 
Sbjct: 8   LPAVLEYKRNLAINYNRQAETLYQARQYEQAIEIYNKAIQAYPNLALSYYNRGNCFFALN 67

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           +Y++  + +  A++L+ ++ +A+ +    Y  L +  +A+    Q +  + ++ +AY+ R
Sbjct: 68  DYQEVLQNYNDALKLNPSYPQAYNNRGNTYYLLGDYHQAIADYTQAVKCNPKYERAYYNR 127

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G   + L ++K+A+ D S  + ++P   E      + Y A+ +Y++AI  YD A+ +  +
Sbjct: 128 GNAYYNLSEYKQALLDFSYAIQLNPDYAESYNNLGNTYIALNQYQQAIDSYDKAIAINPN 187

Query: 652 SMEKF------------VLQCLAFYQKEIAL 670
             + +            V+Q ++ Y K I L
Sbjct: 188 YAQAYNNRGNSYYYLNNVVQAISNYAKAITL 218



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 75/161 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N  +Y  A+  F   ++ +P Y E+    G       + + AI  + +AI  N
Sbjct: 126 NRGNAYYNLSEYKQALLDFSYAIQLNPDYAESYNNLGNTYIALNQYQQAIDSYDKAIAIN 185

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +A+  RG +   L   V+AI + +KA+  +  + +  + RG   +  + +  A+++
Sbjct: 186 PNYAQAYNNRGNSYYYLNNVVQAISNYAKAITLDSQNHEAYNNRGNAYYALQKYKEALKN 245

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
               + L   +  +Y   GL    + + +KA     +A++L
Sbjct: 246 YDQALTLCPNHIESYYNRGLVQIKLKQKQKAIADLQQAVKL 286


>gi|333986950|ref|YP_004519557.1| hypothetical protein MSWAN_0723 [Methanobacterium sp. SWAN-1]
 gi|333825094|gb|AEG17756.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 401

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 3/282 (1%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           F VT     K  S+   + +      +GKY  A+  +++IL+ D  Y  A  G+G     
Sbjct: 2   FIVTVFDSFKKNSL---IKKAYNLTEQGKYQEALGCYNKILQTDLYYTNAWYGKGVVLGK 58

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
                 ++  + +A++ +P+    W  +G     L +  EA++   KALE +PN   +  
Sbjct: 59  LENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYDKALELDPNYFGVWF 118

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G    +  ++  A+E     ++LD      +   G AL+ +GEY +A +++  A+ +D
Sbjct: 119 NKGYALTELGEYLEALECYDEALELDPNYFGVWFNKGYALTELGEYSEAVKSYDTALGID 178

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +    W +       L    +A+E   + L I+ +F+ A+  RG  L  L +H +A++ 
Sbjct: 179 PSDATTWYNRGNILTKLKKYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEAVES 238

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
               L IDP ++   + R     A+G+Y EA+K YD AL+++
Sbjct: 239 YDKALEIDPKHVLAWFNRGYSLAALGKYLEAVKSYDRALEID 280



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 134/268 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G   V   KY  A+  +D+ L+ DP Y      +G A     E   A+  + EA++ +
Sbjct: 85  NKGYTFVKLEKYREALECYDKALELDPNYFGVWFNKGYALTELGEYLEALECYDEALELD 144

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    W  +G A   LGE  EA++    AL  +P+ A   + RG +  K K +  A+E 
Sbjct: 145 PNYFGVWFNKGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIES 204

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++++ +   A+T  G AL+ + ++ +A E++ KA+++D   + AW +       L 
Sbjct: 205 YDKALEINPKFTYAWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNRGYSLAALG 264

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +A++   + L ID      +  +G  L  LG++  A++     L IDP +   LY +
Sbjct: 265 KYLEAVKSYDRALEIDPGDPITWFSKGYALAELGKYSDALESYDKALAIDPIDSIALYNK 324

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSM 653
           A+    IG+Y EA++ +D AL+++ D +
Sbjct: 325 ANIMLEIGKYPEALESFDKALEIDPDYV 352



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 123/265 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            ++G A    G+Y  A+  +D+ L+ DP Y      +G A     E   A+  +  A+  
Sbjct: 118 FNKGYALTELGEYLEALECYDEALELDPNYFGVWFNKGYALTELGEYSEAVKSYDTALGI 177

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +PS    W  RG     L + VEAI+   KALE  P        RG    + K    AVE
Sbjct: 178 DPSDATTWYNRGNILTKLKKYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEAVE 237

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +++D ++  A+   G +L+++G+Y +A +++ +A+++D      W        +L
Sbjct: 238 SYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVKSYDRALEIDPGDPITWFSKGYALAEL 297

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
                ALE   + L ID   S A + +  ++  +G++ +A++     L IDP  +     
Sbjct: 298 GKYSDALESYDKALAIDPIDSIALYNKANIMLEIGKYPEALESFDKALEIDPDYVNAWND 357

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           +   +  +  Y+EA+K Y+ AL L+
Sbjct: 358 KGETFTKLENYQEALKCYEKALKLD 382



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 104/206 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG       KY  AI  +D+ L+ +P +  A  GRG+A    ++   A+  + +A++ +
Sbjct: 187 NRGNILTKLKKYVEAIESYDKALEINPKFTYAWTGRGSALTELKKHLEAVESYDKALEID 246

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG + AALG+ +EA++   +ALE +P        +G    +   ++ A+E 
Sbjct: 247 PKHVLAWFNRGYSLAALGKYLEAVKSYDRALEIDPGDPITWFSKGYALAELGKYSDALES 306

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + +D  +  A       +  IG+Y +A E+  KA+++D +++ AW    + +  L 
Sbjct: 307 YDKALAIDPIDSIALYNKANIMLEIGKYPEALESFDKALEIDPDYVNAWNDKGETFTKLE 366

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLR 591
           N ++AL+C ++ L +D  F  A   R
Sbjct: 367 NYQEALKCYEKALKLDPNFEDALKAR 392



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 105/233 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            ++G A    G+Y+ A+  +D  L  DP        RG      ++   AI  + +A++ 
Sbjct: 152 FNKGYALTELGEYSEAVKSYDTALGIDPSDATTWYNRGNILTKLKKYVEAIESYDKALEI 211

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    AW  RG A   L + +EA++   KALE +P        RG        +  AV+
Sbjct: 212 NPKFTYAWTGRGSALTELKKHLEAVESYDKALEIDPKHVLAWFNRGYSLAALGKYLEAVK 271

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +++D  +   +   G AL+ +G+Y  A E++ KA+ +D     A  +      ++
Sbjct: 272 SYDRALEIDPGDPITWFSKGYALAELGKYSDALESYDKALAIDPIDSIALYNKANIMLEI 331

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
               +ALE   + L ID  +  A++ +G     L  +++A+K     L +DP+
Sbjct: 332 GKYPEALESFDKALEIDPDYVNAWNDKGETFTKLENYQEALKCYEKALKLDPN 384



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L  L N+ +++   D  L       ++  N+ + + +LE ++  +   DKAL+LDP    
Sbjct: 56  LGKLENYPESLECYDKALELDPNYFNVWYNKGYTFVKLEKYREALECYDKALELDPNYFG 115

Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
            +  KG A + LG   EAL  +++  E
Sbjct: 116 VWFNKGYALTELGEYLEALECYDEALE 142


>gi|119484720|ref|ZP_01619202.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119457538|gb|EAW38662.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 335

 Score =  109 bits (273), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 68/253 (26%), Positives = 125/253 (49%)

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
           M    L  +G  +A Q     A+ D  + +  NP+   A+  R      L +   AI+DL
Sbjct: 1   MQNNKLYQQGLIKARQGNYRGALDDLNQVLSCNPNHAIAYTNRALLYYHLKDYKNAIKDL 60

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
             AL+  P  +D    RG        +  A++DL   +K +  + + Y  LGLA++  GE
Sbjct: 61  DYALQINPKLSDAYLNRGNAWRHLGKYEKAIKDLKIALKFNPTSDAIYNNLGLAIAQSGE 120

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           Y+ A + + KA+  +    + + +  + +      + A++   + + +   ++KAY  RG
Sbjct: 121 YEDALKYYNKALLFNPKNHKTYHNRGRSFYMGGRKQDAIQDFNKTIELSPNYTKAYINRG 180

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           L  H LG+H+ AI+D ++ L ID  N+   Y R   Y+++ E R AI D++ A+ L+   
Sbjct: 181 LCHHQLGEHQAAIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTY 240

Query: 653 MEKFVLQCLAFYQ 665
           ++ ++ + LA Y+
Sbjct: 241 IKAYLNRGLARYK 253



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 54/173 (31%), Positives = 84/173 (48%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  L+RG A  + GKY  AI      LK +P         G A A   E E A+  + +A
Sbjct: 72  DAYLNRGNAWRHLGKYEKAIKDLKIALKFNPTSDAIYNNLGLAIAQSGEYEDALKYYNKA 131

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +  NP   + +  RG++    G   +AIQD +K +E  PN       RG+ + +  +  A
Sbjct: 132 LLFNPKNHKTYHNRGRSFYMGGRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQLGEHQA 191

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           A+ED +  +K+D  N  AY   G    S+ E + A +   +AIQLD  +++A+
Sbjct: 192 AIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAY 244



 Score = 51.2 bits (121), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG +    G+   AI  F++ ++  P Y +A I RG       E +AAI D+  A++ +
Sbjct: 144 NRGRSFYMGGRKQDAIQDFNKTIELSPNYTKAYINRGLCHHQLGEHQAAIEDYNTALKID 203

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                A+  RG    +L E   AI D ++A++ +P        RG+  +K  +   A +D
Sbjct: 204 AYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAYLNRGLARYKSGNQTEANKD 263

Query: 506 L--SACVKLDKENKSAYTY 522
                CV     N  AY Y
Sbjct: 264 FYHVMCV-----NADAYVY 277



 Score = 49.7 bits (117), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 46/88 (52%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG+     G++ +AI  ++  LK D     A   RG      +E+ +AI DF +AIQ 
Sbjct: 177 INRGLCHHQLGEHQAAIEDYNTALKIDAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQL 236

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDL 472
           +P+  +A+  RG AR   G   EA +D 
Sbjct: 237 DPTYIKAYLNRGLARYKSGNQTEANKDF 264



 Score = 45.8 bits (107), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/50 (44%), Positives = 34/50 (68%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           NRA  Y  L+ +K+ I+D D ALQ++P L  AY+ +G A+  LG+ E+A+
Sbjct: 42  NRALLYYHLKDYKNAIKDLDYALQINPKLSDAYLNRGNAWRHLGKYEKAI 91



 Score = 40.8 bits (94), Expect = 3.8,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 10/92 (10%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++ +++ A++I       +Y +    NR   Y  L+  +  I D ++A+QLDPT ++AY+
Sbjct: 192 AIEDYNTALKI------DAYNVYAYYNRGCVYYSLKEMRSAIDDFNQAIQLDPTYIKAYL 245

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
            +G A    G + EA     K + H +  +AD
Sbjct: 246 NRGLARYKSGNQTEA----NKDFYHVMCVNAD 273


>gi|220915045|ref|YP_002490353.1| hypothetical protein [Methylobacterium nodulans ORS 2060]
 gi|219952796|gb|ACL63186.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
          Length = 392

 Score =  109 bits (273), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 142/316 (44%), Gaps = 34/316 (10%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RGI      +Y  AI+ +++ ++ +P    A +GRG+    +RE + A++D+ +AI+ 
Sbjct: 30  LNRGITYYGNREYEQAIADYNEAIRIEPGLALAYLGRGSVYESRREYDQAMADYNKAIRI 89

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL----------HE------ 488
           +P    A+  RG    + GE   AI D S A+  +P   D            HE      
Sbjct: 90  DPKYAIAYNYRGNVYVSKGEYDRAIADYSMAIRIDPEYTDAYDNRGYIYQNKHEYDRAIA 149

Query: 489 ------------------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
                             RG++ +   +++ A+ D    ++++  +KSAY   GLA    
Sbjct: 150 DYNEAIRINPELVSAYFNRGLIYYNMGNYDLAIADYGNAIRIEPNHKSAYNNRGLAYFGK 209

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           GEY +A   + +AI++D ++  A+ +       + + +KAL   + V+ +D     AY  
Sbjct: 210 GEYDRAISDYDEAIRIDPSYTSAYINRANLNDIIGDIDKALIDYKNVILLDLNHEIAYIN 269

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           R L+      +  AI D ++ + I P +    ++R   Y+   EY  A  DY  A+ ++ 
Sbjct: 270 RALIYQNKNNYDLAITDCNNAIRIKPKHANSYFIRGGIYYDKTEYDRAAVDYSEAIRIDP 329

Query: 651 DSMEKFVLQCLAFYQK 666
                +  + LA+  K
Sbjct: 330 KYALAYFNRGLAYLNK 345



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 5/289 (1%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            RI    +I+ ++R   G   V++G+Y  AI+ +   ++ DP Y +A   RG     + E
Sbjct: 87  IRIDPKYAIAYNYR---GNVYVSKGEYDRAIADYSMAIRIDPEYTDAYDNRGYIYQNKHE 143

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+D+ EAI+ NP    A+  RG     +G    AI D   A+  EPN     + RG
Sbjct: 144 YDRAIADYNEAIRINPELVSAYFNRGLIYYNMGNYDLAIADYGNAIRIEPNHKSAYNNRG 203

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +  F   +++ A+ D    +++D    SAY         IG+  KA   +   I LD N 
Sbjct: 204 LAYFGKGEYDRAISDYDEAIRIDPSYTSAYINRANLNDIIGDIDKALIDYKNVILLDLNH 263

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +    YQ+  N + A+      + I  + + +Y +RG + +   ++ +A  D S 
Sbjct: 264 EIAYINRALIYQNKNNYDLAITDCNNAIRIKPKHANSYFIRGGIYYDKTEYDRAAVDYSE 323

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL--ELDSMEKFV 657
            + IDP      + R   Y    E R ++ D+  A+ L  EL+  + F+
Sbjct: 324 AIRIDPKYALAYFNRGLAYLNKNEPRRSLTDFAEAVRLKPELEKNDNFL 372



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 2/146 (1%)

Query: 522 YLGLALSSIG--EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           YL   ++  G  EY++A   + +AI+++     A+      Y+     ++A+    + + 
Sbjct: 29  YLNRGITYYGNREYEQAIADYNEAIRIEPGLALAYLGRGSVYESRREYDQAMADYNKAIR 88

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           ID +++ AY+ RG +    G++ +AI D S  + IDP   +    R   Y    EY  AI
Sbjct: 89  IDPKYAIAYNYRGNVYVSKGEYDRAIADYSMAIRIDPEYTDAYDNRGYIYQNKHEYDRAI 148

Query: 640 KDYDAALDLELDSMEKFVLQCLAFYQ 665
            DY+ A+ +  + +  +  + L +Y 
Sbjct: 149 ADYNEAIRINPELVSAYFNRGLIYYN 174


>gi|434404268|ref|YP_007147153.1| tetratricopeptide repeat protein,tetratricopeptide repeat
           protein,protein kinase family protein [Cylindrospermum
           stagnale PCC 7417]
 gi|428258523|gb|AFZ24473.1| tetratricopeptide repeat protein,tetratricopeptide repeat
           protein,protein kinase family protein [Cylindrospermum
           stagnale PCC 7417]
          Length = 704

 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 140/281 (49%), Gaps = 5/281 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  A++ +D+ ++  P Y EA  GRG + A  +    AI+ F  AIQ      E W  +
Sbjct: 380 KYPEALAAYDKAIQIQPDYLEAWSGRGFSLANLQRYSEAIASFDRAIQLKNDYPEVWNAK 439

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   L +   AI+   KA+EF+P   +  +++G+     K ++ AV   +  V+L  +
Sbjct: 440 GDAFRNLNQYDNAIKSYEKAIEFQPEYYEAWYKKGLALHNLKQYDEAVIAFNKVVELKPD 499

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
             SA+  LG AL ++  Y+ A  A+ KA+Q   ++  AW        +L    +A+E   
Sbjct: 500 YNSAWYSLGNALVNLNRYQDAFIAYDKAVQYKPSYNIAWFSRGNMLINLRRYPEAIESFN 559

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           QV+  +    +A++ RG  LH + ++++AI+  +  L +  ++    Y   +  +++ +Y
Sbjct: 560 QVIKYNPSNYQAWYSRGWSLHQIQRYQEAIESYNKALALKRNDYLVWYALGNSQYSLQKY 619

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
            +AI  Y+ A+  + D  E +  +  AF     YQ+ IA Y
Sbjct: 620 EDAIASYNKAVRYKADHYESWYSRGNAFLNLRRYQEAIASY 660



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 103/232 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A  N  +Y +AI  +++ ++  P Y EA   +G A    ++ + A+  F + ++  
Sbjct: 438 AKGDAFRNLNQYDNAIKSYEKAIEFQPEYYEAWYKKGLALHNLKQYDEAVIAFNKVVELK 497

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW   G A   L    +A     KA++++P+       RG +    + +  A+E 
Sbjct: 498 PDYNSAWYSLGNALVNLNRYQDAFIAYDKAVQYKPSYNIAWFSRGNMLINLRRYPEAIES 557

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K +  N  A+   G +L  I  Y++A E++ KA+ L RN    W  L      L 
Sbjct: 558 FNQVIKYNPSNYQAWYSRGWSLHQIQRYQEAIESYNKALALKRNDYLVWYALGNSQYSLQ 617

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             E A+    + +       ++++ RG     L ++++AI      +   P+
Sbjct: 618 KYEDAIASYNKAVRYKADHYESWYSRGNAFLNLRRYQEAIASYEQAIKYKPN 669



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/282 (19%), Positives = 122/282 (43%), Gaps = 1/282 (0%)

Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
           +K  C     +  S  +  +  + +A +  G  A A +     +K  P+  + +  +   
Sbjct: 248 DKMVCYDFRQRYPSAKLALQALQELAPLTSGTIALAPAALPNNIKTRPLNKKGIFLKFLL 307

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
             F   +    S F     +N +A E +K+ G     L    +A+    KA+  +PN   
Sbjct: 308 AMFLVGVSGTASVFIVKEINNNNATELYKQ-GNTFLELQRYQDALAVYEKAVNLKPNYVQ 366

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
             + +G   F+ K +  A+      +++  +   A++  G +L+++  Y +A  +  +AI
Sbjct: 367 GWNGQGKALFELKKYPEALAAYDKAIQIQPDYLEAWSGRGFSLANLQRYSEAIASFDRAI 426

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           QL  ++ E W      +++L   + A++  ++ +     + +A++ +GL LH L Q+ +A
Sbjct: 427 QLKNDYPEVWNAKGDAFRNLNQYDNAIKSYEKAIEFQPEYYEAWYKKGLALHNLKQYDEA 486

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           +   +  + + P      Y   +    +  Y++A   YD A+
Sbjct: 487 VIAFNKVVELKPDYNSAWYSLGNALVNLNRYQDAFIAYDKAV 528



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 78/168 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S G A VN  +Y  A   +D+ ++  P Y  A   RG      R    AI  F + I+ N
Sbjct: 506 SLGNALVNLNRYQDAFIAYDKAVQYKPSYNIAWFSRGNMLINLRRYPEAIESFNQVIKYN 565

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           PS  +AW  RG +   +    EAI+  +KAL  + N   + +  G   +  + +  A+  
Sbjct: 566 PSNYQAWYSRGWSLHQIQRYQEAIESYNKALALKRNDYLVWYALGNSQYSLQKYEDAIAS 625

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  V+   ++  ++   G A  ++  Y++A  ++ +AI+   N+ +A
Sbjct: 626 YNKAVRYKADHYESWYSRGNAFLNLRRYQEAIASYEQAIKYKPNYQQA 673



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 94/205 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+A  N  +Y  A+  F+++++  P Y  A    G A       + A   + +A+Q  P
Sbjct: 473 KGLALHNLKQYDEAVIAFNKVVELKPDYNSAWYSLGNALVNLNRYQDAFIAYDKAVQYKP 532

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S   AW  RG     L    EAI+  ++ +++ P++    + RG    + + +  A+E  
Sbjct: 533 SYNIAWFSRGNMLINLRRYPEAIESFNQVIKYNPSNYQAWYSRGWSLHQIQRYQEAIESY 592

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + L + +   +  LG +  S+ +Y+ A  ++ KA++   +  E+W      + +L  
Sbjct: 593 NKALALKRNDYLVWYALGNSQYSLQKYEDAIASYNKAVRYKADHYESWYSRGNAFLNLRR 652

Query: 567 SEKALECLQQVLYIDKRFSKAYHLR 591
            ++A+   +Q +     + +A   R
Sbjct: 653 YQEAIASYEQAIKYKPNYQQAIDAR 677



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/224 (21%), Positives = 91/224 (40%), Gaps = 7/224 (3%)

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           E   N+A  L+++G    + + +  A+      V L       +   G AL  + +Y +A
Sbjct: 325 EINNNNATELYKQGNTFLELQRYQDALAVYEKAVNLKPNYVQGWNGQGKALFELKKYPEA 384

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
             A+ KAIQ+  ++LEAW        +L    +A+    + + +   + + ++ +G    
Sbjct: 385 LAAYDKAIQIQPDYLEAWSGRGFSLANLQRYSEAIASFDRAIQLKNDYPEVWNAKGDAFR 444

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            L Q+  AIK     +   P   E  Y +    H + +Y EA+  ++  ++L+ D     
Sbjct: 445 NLNQYDNAIKSYEKAIEFQPEYYEAWYKKGLALHNLKQYDEAVIAFNKVVELKPDYNS-- 502

Query: 657 VLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                A+Y    AL   ++    F  +D      P +   W  R
Sbjct: 503 -----AWYSLGNALVNLNRYQDAFIAYDKAVQYKPSYNIAWFSR 541


>gi|429123527|ref|ZP_19184060.1| hypothetical protein A966_04466 [Brachyspira hampsonii 30446]
 gi|426280600|gb|EKV57611.1| hypothetical protein A966_04466 [Brachyspira hampsonii 30446]
          Length = 352

 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 153/299 (51%), Gaps = 3/299 (1%)

Query: 321 SNTNSESYSKSSISDNKSSDSTESRSKL-SFKWDMLKETSNEAKRNKKFCVTRISKSKSI 379
           +N + E+YS     + ++    E  +K+ S K   +   +N A  NKK  +  ++     
Sbjct: 39  NNIDPENYSDFDDFNERAKTFNEELNKIISDKTYFIGSFTNIADNNKKVDIDSLNNLTDY 98

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
             D+  S+GI +   G+YA AI  +D+ +K +P   +A   +G ++A    L+ AI ++ 
Sbjct: 99  H-DYN-SKGIHKSANGEYAEAIKYYDEAIKLNPNMADAYYNKGISKAKLGLLKEAIEEYD 156

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI+  P   +A+  RG  ++ LG   EAI+D  KAL  +PN  D  + +G++  +   F
Sbjct: 157 KAIKLKPDYADAYYNRGLIKSDLGFLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLF 216

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A++D +  +K+  ++   Y   G +  ++  Y+++ + + KAI+L+  +  A+ +   
Sbjct: 217 KEAIKDFNKAIKIADDDAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPYYASAYNNRGN 276

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
               L   E+A++   + + +   ++ AY+ RG     LG +K A+KD    L +DP+N
Sbjct: 277 AKDSLGLYEEAIKDFDKAIELKPDYADAYNNRGYSKENLGLYKDALKDYKKALKLDPNN 335



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 17/250 (6%)

Query: 424 ARAFQRELEAAISDFTEAIQS-----------------NPSAGEAWKRRGQARAALGESV 466
           A+ F  EL   ISD T  I S                 N +    +  +G  ++A GE  
Sbjct: 56  AKTFNEELNKIISDKTYFIGSFTNIADNNKKVDIDSLNNLTDYHDYNSKGIHKSANGEYA 115

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           EAI+   +A++  PN AD  + +GI   K      A+E+    +KL  +   AY   GL 
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKGISKAKLGLLKEAIEEYDKAIKLKPDYADAYYNRGLI 175

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
            S +G  ++A +   KA+ +D N  +A+ +      +L   ++A++   + + I    + 
Sbjct: 176 KSDLGFLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKIADDDAV 235

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            Y+ RG   + L  ++++IKD    + ++P        R +   ++G Y EAIKD+D A+
Sbjct: 236 IYNNRGNSKYNLELYEESIKDYDKAIKLNPYYASAYNNRGNAKDSLGLYEEAIKDFDKAI 295

Query: 647 DLELDSMEKF 656
           +L+ D  + +
Sbjct: 296 ELKPDYADAY 305



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 13/152 (8%)

Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILK--EDPMYPEALI--GRGTARAF 427
           K++S+D  L     ++G+ +   G +  AI  F++ +K  +D    +A+I   RG ++  
Sbjct: 191 KALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKIADD----DAVIYNNRGNSKYN 246

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
               E +I D+ +AI+ NP    A+  RG A+ +LG   EAI+D  KA+E +P+ AD  +
Sbjct: 247 LELYEESIKDYDKAIKLNPYYASAYNNRGNAKDSLGLYEEAIKDFDKAIELKPDYADAYN 306

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
            RG        +  A++D    +KLD  N+ A
Sbjct: 307 NRGYSKENLGLYKDALKDYKKALKLDPNNEYA 338



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 11/111 (9%)

Query: 24  DELVRVDSVMASAITAR-IELAKLCSLRN----WSKAIRILDSLLAQSYEIQDICNRAFC 78
           DE ++++  MA A   + I  AKL  L+     + KAI+ L    A +Y      NR   
Sbjct: 122 DEAIKLNPNMADAYYNKGISKAKLGLLKEAIEEYDKAIK-LKPDYADAY-----YNRGLI 175

Query: 79  YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
            S L   +  I+D DKAL +DP L  AY  KG   + LG  +EA+  + K 
Sbjct: 176 KSDLGFLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKA 226



 Score = 46.6 bits (109), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++++++KAI+I D       +     NR      LEL++  I+D DKA++L+P    AY 
Sbjct: 219 AIKDFNKAIKIADD------DAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPYYASAYN 272

Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
            +G A  +LG  EEA+  ++K  E
Sbjct: 273 NRGNAKDSLGLYEEAIKDFDKAIE 296



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           S++++ KAI+ L+   A +Y      NR      L L++  I+D DKA++L P    AY 
Sbjct: 253 SIKDYDKAIK-LNPYYASAYN-----NRGNAKDSLGLYEEAIKDFDKAIELKPDYADAYN 306

Query: 108 LKGCAFSALGRKEEALSVWEKG 129
            +G +   LG  ++AL  ++K 
Sbjct: 307 NRGYSKENLGLYKDALKDYKKA 328


>gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 440

 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 139/272 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G +  ++GKY  AI  +D+ ++ DP    A   +G +   Q++ + +I  + EAI  N
Sbjct: 97  NKGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLN 156

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E W  +G++ A  G+  EAI+   +A+  +P +      +G+       ++ A+E 
Sbjct: 157 PVLAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEA 216

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD  + + +   G++L+  G++ +A EA+ +AI+LD      WG+      D  
Sbjct: 217 YDEAIRLDPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQG 276

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+E   + + +D   + A+  +G+ L   G++ +AI+     + +DP++    + +
Sbjct: 277 KYDEAIEAYDEAIRLDPANAAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDATAWFNK 336

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
            +  +   +Y E+IK YD A+ L  D  E ++
Sbjct: 337 GNSLNKQKKYDESIKAYDEAIRLNPDLAEPWI 368



 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 133/263 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+A  ++GKY  AI  +D+ ++ DP    A   +G A A Q + + AI  + EAI+ +P
Sbjct: 30  QGVALADQGKYDEAIKAYDEAIRLDPTIAAAWSNKGVAFADQGKHDEAIEAYDEAIRLDP 89

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   AW  +G + A  G+  EAI+   +A+  +P  A     +G    K K ++ +++  
Sbjct: 90  TDAAAWGNKGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAY 149

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + L+      +   G +L+  G+Y +A EA+ +AI+LD   + AWG+      D   
Sbjct: 150 DEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGK 209

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++A+E   + + +D   +  +  +G+ L   G+H +AI+     + +DP++      + 
Sbjct: 210 YDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTDAAVWGNKG 269

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
                 G+Y EAI+ YD A+ L+
Sbjct: 270 VSLVDQGKYDEAIEAYDEAIRLD 292



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 146/297 (49%), Gaps = 14/297 (4%)

Query: 389 IAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           IA  N+G       KY  +I  +D+ +  +P+  E  IG+G + A Q + + AI  + EA
Sbjct: 127 IAWFNKGNSLNKQKKYDESIKAYDEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEA 186

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ +P+   AW  +G + A  G+  EAI+   +A+  +P  A +   +G+        + 
Sbjct: 187 IRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQGKHDE 246

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+E     ++LD  + + +   G++L   G+Y +A EA+ +AI+LD     AWG+     
Sbjct: 247 AIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPANAAAWGNKGVSL 306

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            D    ++A+E   + + +D   + A+  +G  L+   ++ ++IK     + ++P   E 
Sbjct: 307 ADQGKYDEAIEAYDEAIRLDPTDATAWFNKGNSLNKQKKYDESIKAYDEAIRLNPDLAEP 366

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
              + +     G++ EAI+ YD A  + LDS +       A+Y K + L+  ++  S
Sbjct: 367 WIGKGNSLDDQGKHDEAIQAYDEA--IRLDSTD-----ANAWYNKGVVLHNQNRPGS 416



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 149/315 (47%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A  ++GK+  AI  +D+ ++ DP    A   +G + A Q + + AI  + EAI+ +
Sbjct: 63  NKGVAFADQGKHDEAIEAYDEAIRLDPTDAAAWGNKGASLADQGKYDEAIEAYDEAIRLD 122

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   AW  +G +     +  E+I+   +A+   P  A+    +G        ++ A+E 
Sbjct: 123 PTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEA 182

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD  N +A+   G++L+  G+Y +A EA+ +AI+LD      WG+      D  
Sbjct: 183 YDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDAAVWGNKGVSLADQG 242

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+E   + + +D   +  +  +G+ L   G++ +AI+     + +DP+N      +
Sbjct: 243 KHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIEAYDEAIRLDPANAAAWGNK 302

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                  G+Y EAI+ YD A+ L+            A++ K  +L    K +     +D 
Sbjct: 303 GVSLADQGKYDEAIEAYDEAIRLD-------PTDATAWFNKGNSLNKQKKYDESIKAYDE 355

Query: 686 DGDIDPLFKEYWCKR 700
              ++P   E W  +
Sbjct: 356 AIRLNPDLAEPWIGK 370



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 122/246 (49%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + +G +  ++GKY  AI  +D+ ++ DP    A   +G + A Q + + AI  + EAI+ 
Sbjct: 164 IGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQGKYDEAIEAYDEAIRL 223

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+    W  +G + A  G+  EAI+   +A+  +P  A +   +G+       ++ A+E
Sbjct: 224 DPTDAAVWGNKGVSLADQGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKYDEAIE 283

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++LD  N +A+   G++L+  G+Y +A EA+ +AI+LD     AW +        
Sbjct: 284 AYDEAIRLDPANAAAWGNKGVSLADQGKYDEAIEAYDEAIRLDPTDATAWFNKGNSLNKQ 343

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              +++++   + + ++   ++ +  +G  L   G+H +AI+     + +D ++    Y 
Sbjct: 344 KKYDESIKAYDEAIRLNPDLAEPWIGKGNSLDDQGKHDEAIQAYDEAIRLDSTDANAWYN 403

Query: 625 RASCYH 630
           +    H
Sbjct: 404 KGVVLH 409



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 97/200 (48%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
           E W  +G A A  G+  EAI+   +A+  +P  A     +G+        + A+E     
Sbjct: 25  EDWFYQGVALADQGKYDEAIKAYDEAIRLDPTIAAAWSNKGVAFADQGKHDEAIEAYDEA 84

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           ++LD  + +A+   G +L+  G+Y +A EA+ +AI+LD     AW +           ++
Sbjct: 85  IRLDPTDAAAWGNKGASLADQGKYDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDE 144

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           +++   + + ++   ++ +  +G  L   G++ +AI+     + +DP+N+     +    
Sbjct: 145 SIKAYDEAIGLNPVLAEPWIGKGKSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSL 204

Query: 630 HAIGEYREAIKDYDAALDLE 649
              G+Y EAI+ YD A+ L+
Sbjct: 205 ADQGKYDEAIEAYDEAIRLD 224


>gi|404403850|ref|ZP_10995434.1| hypothetical protein AJC13_00370 [Alistipes sp. JC136]
          Length = 662

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 123/271 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA+ N      A + F   ++ +P+Y +A   R   R+     + A+ DF EAI+  P
Sbjct: 66  RGIAKYNLDDLLGAEADFSTAIRLNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 125

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG  R    +  EAI+D  K +  E   AD    RG+     KD   A E+ 
Sbjct: 126 DLPGPYYSRGVTRLLNQQFKEAIEDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENF 185

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++ ++EN + Y   G       +YK+AE    KAI  D  ++ ++ +    Y     
Sbjct: 186 NTAIRTNRENPNGYNRRGGLHLQQEQYKEAEADFNKAISCDSTYVLSYFNRALVYNATNR 245

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +AL    +V+ +D   S  Y  R +L   +G + +A++D        P+N+   Y RA
Sbjct: 246 PMQALADFDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRA 305

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
             Y  +GE  +A+ DY AA+ L  D    ++
Sbjct: 306 GVYAQLGEIEQAVADYSAAIKLYPDFANAYI 336



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 19/271 (7%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+ ++   ++  AI  FD+ ++++    +A I RG +    ++   A  +F  AI++N
Sbjct: 133 SRGVTRLLNQQFKEAIEDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENFNTAIRTN 192

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                 + RRG       +  EA  D +KA+  +         R +V         A+ D
Sbjct: 193 RENPNGYNRRGGLHLQQEQYKEAEADFNKAISCDSTYVLSYFNRALVYNATNRPMQALAD 252

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD  N   Y    +  + IG+Y +A E + K      N +  + +    Y  L 
Sbjct: 253 FDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRAGVYAQLG 312

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+      + +   F+ AY  RG L   L   + A  D                 R
Sbjct: 313 EIEQAVADYSAAIKLYPDFANAYIYRGRLREYLNDPQGAKSD-----------------R 355

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           A     I EYR  +   D+   +  D+ ++F
Sbjct: 356 AIAQKKIAEYRSRLS--DSTYSIYADTTQRF 384



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 31/159 (19%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
             RGI Q    +Y ++++ +   ++ +P  P   + R T RA            +QR   
Sbjct: 487 FERGITQSLIKQYTNSVNTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 546

Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
                             + A++D  +A++  P    A+  R    A  G   EA +D S
Sbjct: 547 DSDPANRLNNNSKRTYSYDEAVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEAYEDYS 606

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
           KA+E  P  A+  + RGI+    KD      D+S   +L
Sbjct: 607 KAIELNPAFAEAYYNRGIIQIFMKDTRKGCLDISKAGEL 645



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 3/138 (2%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
            L  RG  ++  ++   +++ ++ AI+ NPS    +  R   RA + + + +I +  + +
Sbjct: 485 VLFERGITQSLIKQYTNSVNTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 544

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             + + A+ L+      + + +   AV DL+  VKL  +   AY      L+  G   +A
Sbjct: 545 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEA 601

Query: 537 EEAHLKAIQLDRNFLEAW 554
            E + KAI+L+  F EA+
Sbjct: 602 YEDYSKAIELNPAFAEAY 619


>gi|421597100|ref|ZP_16040780.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
           CCGE-LA001]
 gi|404270790|gb|EJZ34790.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
           CCGE-LA001]
          Length = 452

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 132/290 (45%), Gaps = 30/290 (10%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQIL 408
           ++ +T+N A       V R   +  IS         L R IA   +G+ A A  +   +L
Sbjct: 50  IIDQTANSASERSLALVARAEANARISGGLSQALRDLDRAIAL--DGRNAKAWRVRGDLL 107

Query: 409 KE------------------DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           +E                  DP   EA   RG     QR L+ A++D+ +AI+  P   +
Sbjct: 108 REAGGDLNRAAADLTKAIELDPKDAEAYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQ 167

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           AW  RG A    G++ +A+++  +AL  +PN A     RG    K    N AV D    +
Sbjct: 168 AWSDRGVAYYLGGDNEKAVKNFDEALRLDPNRARTYTNRGAAYKKLGQLNKAVADDGEAI 227

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR--NFLEAWGHLTQFYQDLANSE 568
           +LD      Y   GL  +++GEY KA   + +AI+ ++  NFL   G   QF  +L    
Sbjct: 228 RLDPRVPEYYDNRGLTYAAMGEYDKAIADYDQAIRREQRANFLTNRGDSYQFKGELG--- 284

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            AL   +  L +D  F+K Y+ R +L   +G+ KKA+ D  + L +DP N
Sbjct: 285 AALSDYEAALKLDPNFAKTYNNRAVLYKKMGERKKALADYETALKLDPGN 334



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 2/197 (1%)

Query: 455 RGQARAAL-GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKL 512
           R +A A + G   +A++DL +A+  +  +A     RG ++     D N A  DL+  ++L
Sbjct: 68  RAEANARISGGLSQALRDLDRAIALDGRNAKAWRVRGDLLREAGGDLNRAAADLTKAIEL 127

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           D ++  AY   G+  ++     +A   + +AI+L  +  +AW      Y    ++EKA++
Sbjct: 128 DPKDAEAYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVAYYLGGDNEKAVK 187

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + L +D   ++ Y  RG     LGQ  KA+ D    + +DP   E    R   Y A+
Sbjct: 188 NFDEALRLDPNRARTYTNRGAAYKKLGQLNKAVADDGEAIRLDPRVPEYYDNRGLTYAAM 247

Query: 633 GEYREAIKDYDAALDLE 649
           GEY +AI DYD A+  E
Sbjct: 248 GEYDKAIADYDQAIRRE 264



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 33/180 (18%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A    G    A+  FD+ L+ DP        RG A     +L  A++D  EAI+ +P
Sbjct: 172 RGVAYYLGGDNEKAVKNFDEALRLDPNRARTYTNRGAAYKKLGQLNKAVADDGEAIRLDP 231

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKA------------------------------- 475
              E +  RG   AA+GE  +AI D  +A                               
Sbjct: 232 RVPEYYDNRGLTYAAMGEYDKAIADYDQAIRREQRANFLTNRGDSYQFKGELGAALSDYE 291

Query: 476 --LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
             L+ +PN A   + R ++  K  +   A+ D    +KLD  N++A     + ++ I ++
Sbjct: 292 AALKLDPNFAKTYNNRAVLYKKMGERKKALADYETALKLDPGNENATNGRRVMIAEIAKF 351



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 6/131 (4%)

Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            ++I +D R+     +RG+     G+Y  AI+ +DQ ++ +      L  RG +  F+ E
Sbjct: 224 GEAIRLDPRVPEYYDNRGLTYAAMGEYDKAIADYDQAIRRE-QRANFLTNRGDSYQFKGE 282

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           L AA+SD+  A++ +P+  + +  R      +GE  +A+ D   AL+ +P + +  + R 
Sbjct: 283 LGAALSDYEAALKLDPNFAKTYNNRAVLYKKMGERKKALADYETALKLDPGNENATNGRR 342

Query: 491 IVNFKFKDFNA 501
           ++  +   F A
Sbjct: 343 VMIAEIAKFGA 353



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 569 KALECLQQVLYIDKRFSKAYHLRG-LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +AL  L + + +D R +KA+ +RG LL    G   +A  DL+  + +DP + E   LR  
Sbjct: 81  QALRDLDRAIALDGRNAKAWRVRGDLLREAGGDLNRAAADLTKAIELDPKDAEAYELRGV 140

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            Y        A+ DYD A+ L+ D  + +  + +A+Y
Sbjct: 141 VYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVAYY 177


>gi|218246150|ref|YP_002371521.1| hypothetical protein PCC8801_1300 [Cyanothece sp. PCC 8801]
 gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
          Length = 878

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 148/307 (48%), Gaps = 14/307 (4%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           S+SI   F+  R   ++  GKY  A +IF ++++ DP   +A    G A  +Q +L+ AI
Sbjct: 26  SQSIDQLFQQGRTAGKM--GKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAI 83

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           + + +AIQ NP+  +A+   G A +  G+  EAI    KA++  PN AD  +  GI    
Sbjct: 84  AAYQKAIQLNPNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSD 143

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
                 A+      ++L+     AY  LG+ALS  G+ ++A  A+ KAIQL+ N+ +A+ 
Sbjct: 144 QGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYY 203

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           +L     D    ++A+   Q+ + +D   + AY+  G  L+  G+ ++AI      + ++
Sbjct: 204 NLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLN 263

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VL-------QCLAF 663
           P+  E            G+  EAI  Y  A+ L  +  E +      L       + +A 
Sbjct: 264 PNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAA 323

Query: 664 YQKEIAL 670
           YQK I L
Sbjct: 324 YQKAIQL 330



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 129/261 (49%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA  ++GK   AI+ + + ++ +P + +A    G A + Q +LE AI+ + +AIQ NP+
Sbjct: 138 GIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPN 197

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +A+   G A    G+  EAI    KA++ +PN A+  +  G   +K      A+    
Sbjct: 198 YADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQ 257

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+     AY  LG+ALS  G+  +A  A+ KAIQL+ N  EA+ +L     D    
Sbjct: 258 KAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKR 317

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+   Q+ + ++  F+ AY+  G+ L   G+  +AI      + ++P+          
Sbjct: 318 DEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGV 377

Query: 628 CYHAIGEYREAIKDYDAALDL 648
                G+  EAI  Y  A+ L
Sbjct: 378 ALSDQGKRDEAIAAYQKAIQL 398



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 129/261 (49%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A  ++GK   AI+ + + ++ +P Y +A    G A + Q +LE AI+ + +AIQ NP+
Sbjct: 104 GNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSDQGKLEEAIAAYQKAIQLNPN 163

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +A+   G A +  G+  EAI    KA++  PN AD  +  G   F     + A+    
Sbjct: 164 FTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQ 223

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++LD  + +AY  LG AL   G+ ++A  A+ KAIQL+ N  EA+ +L     D    
Sbjct: 224 KAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKR 283

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+   Q+ + ++   ++AY+  G+ L   G+  +AI      + ++P+          
Sbjct: 284 DEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGV 343

Query: 628 CYHAIGEYREAIKDYDAALDL 648
                G+  EAI  Y  A+ L
Sbjct: 344 ALSDQGKRDEAIAAYQKAIQL 364



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 140/306 (45%), Gaps = 7/306 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A  ++GK   AI+ + + ++ DP    A    G A   Q +LE AI+ + +AIQ NP+
Sbjct: 206 GNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPN 265

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA+   G A +  G+  EAI    KA++  PN A+  +  G+        + A+    
Sbjct: 266 LAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQ 325

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+     AY  LG+ALS  G+  +A  A+ KAIQL+ NF  A+ +L     D    
Sbjct: 326 KAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKR 385

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+   Q+ + ++  F+ AY+  G+ L   G+  +AI      + +DP++         
Sbjct: 386 DEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGL 445

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG 687
                G+  EAI  Y  A+ L  +         LA+     ALY+  K       +    
Sbjct: 446 ALRNQGKRDEAITAYQKAIQLNPNF-------ALAYNNLGNALYSQGKREEAIAAYQKAI 498

Query: 688 DIDPLF 693
            ++P F
Sbjct: 499 QLNPNF 504



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 127/262 (48%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA  ++GK   AI+ + + ++ +P Y +A    G A   Q +L+ AI+ + +AIQ +P+
Sbjct: 172 GIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIAAYQKAIQLDPN 231

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+   G A    G+  EAI    KA++  PN A+  +  G+        + A+    
Sbjct: 232 DANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQ 291

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+     AY  LG+ALS  G+  +A  A+ KAIQL+ NF  A+ +L     D    
Sbjct: 292 KAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKR 351

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+   Q+ + ++  F+ AY+  G+ L   G+  +AI      + ++P+          
Sbjct: 352 DEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGV 411

Query: 628 CYHAIGEYREAIKDYDAALDLE 649
                G+  EAI  Y  A+ L+
Sbjct: 412 ALRNQGKRDEAIAAYQKAIQLD 433



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 165/360 (45%), Gaps = 10/360 (2%)

Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYP 415
           S++ KR++   +    K+  ++ +F L+    G+A  ++GK   AI+ + + ++ +P + 
Sbjct: 312 SDQGKRDE--AIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFA 369

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
            A    G A + Q + + AI+ + +AIQ NP+   A+   G A    G+  EAI    KA
Sbjct: 370 LAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKA 429

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           ++ +PN A+  +  G+        + A+      ++L+     AY  LG AL S G+ ++
Sbjct: 430 IQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREE 489

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A  A+ KAIQL+ NF  A+ +L     D    ++A+   Q+ + ++  F+ AY+  G  L
Sbjct: 490 AIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNAL 549

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD-SME 654
              G+  +AI      + ++P+         +     G+  EAI  Y  AL L  D S+ 
Sbjct: 550 SDQGKLNEAIATYQKAIQLNPNFALAYNNLGNALKDQGKLNEAIAAYQKALSLPEDTSVT 609

Query: 655 KFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQP 714
                 LA     +      K+      ++    IDP F EY  K    ++    + +QP
Sbjct: 610 PTTAHTLAHNNLGLVYQPQGKLEEALREYEAALKIDPKF-EYAIKN---RDAVLALLKQP 665



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 9/295 (3%)

Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPM 413
           S++ KR++     +    K+I ++  L+      G+A  ++GK   AI+ + + ++ +P 
Sbjct: 278 SDQGKRDEAIAAYQ----KAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 333

Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
           +  A    G A + Q + + AI+ + +AIQ NP+   A+   G A +  G+  EAI    
Sbjct: 334 FALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQ 393

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           KA++  PN A   +  G+        + A+      ++LD  + +AY  LGLAL + G+ 
Sbjct: 394 KAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKR 453

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
            +A  A+ KAIQL+ NF  A+ +L          E+A+   Q+ + ++  F+ AY+  G 
Sbjct: 454 DEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGN 513

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            L   G+  +AI      + ++P+         +     G+  EAI  Y  A+ L
Sbjct: 514 ALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQL 568



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 7/306 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A  ++GK   AI+ + + ++ +P   EA    G A + Q + + AI+ + +AIQ NP+
Sbjct: 274 GVALSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPN 333

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+   G A +  G+  EAI    KA++  PN A   +  G+        + A+    
Sbjct: 334 FALAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQ 393

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+     AY  LG+AL + G+  +A  A+ KAIQLD N   A+ +L    ++    
Sbjct: 394 KAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKR 453

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+   Q+ + ++  F+ AY+  G  L+  G+ ++AI      + ++P+         +
Sbjct: 454 DEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGN 513

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG 687
                G+  EAI  Y  A+ L  +         LA+     AL    K+N     +    
Sbjct: 514 ALSDQGKRDEAIAAYQKAIQLNPNF-------ALAYNNLGNALSDQGKLNEAIATYQKAI 566

Query: 688 DIDPLF 693
            ++P F
Sbjct: 567 QLNPNF 572


>gi|449130250|ref|ZP_21766471.1| hypothetical protein HMPREF9724_01136 [Treponema denticola SP37]
 gi|448943089|gb|EMB23982.1| hypothetical protein HMPREF9724_01136 [Treponema denticola SP37]
          Length = 329

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  + + ++ DP Y EA + RG    +  E E A++DF + I+ +P   +A+  +G   
Sbjct: 54  AIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALADFDKVIELSPQEDKAYYFKGLLF 113

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G   +AI++L+ A+       +    R  +    K ++ A+++++A +KL+  + S 
Sbjct: 114 NDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYLKTYDKALDNINAAIKLNSNSASL 173

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   GL   S+ +Y +A + + K+IQ+D N+++++  L   Y  L    +AL+ L + + 
Sbjct: 174 YMQKGLLYYSVNKYTEAIKEYEKSIQIDPNYVQSYKGLISIYGILEQDIEALDLLNRAIA 233

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I+  +   Y  RG +L  L ++++AIKD +  + ++  N    Y+R   Y  +  Y++AI
Sbjct: 234 INPDYI-LYRNRGWILCKLNRYEEAIKDCTKSIKLNHINSISYYIRGLIYLELKLYKKAI 292

Query: 640 KDYDAAL 646
           +D+D A+
Sbjct: 293 EDFDNAI 299



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 81/153 (52%), Gaps = 3/153 (1%)

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           +N S   Y  +A S+  E K    A   + KAI+ D  ++EA+ +  + Y  +   EKAL
Sbjct: 30  QNYSQAEYFNIAGSTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKAL 89

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               +V+ +  +  KAY+ +GLL +  G + KAI++L++ + ++  + E    R+  Y  
Sbjct: 90  ADFDKVIELSPQEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGY 149

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
           +  Y +A+ + +AA+ L  +S   ++ + L +Y
Sbjct: 150 LKTYDKALDNINAAIKLNSNSASLYMQKGLLYY 182



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 80/176 (45%)

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N S  E +   G       +   AI   +KA+E +P   +    RG + +   +   A+ 
Sbjct: 31  NYSQAEYFNIAGSTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALA 90

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++L  +   AY + GL  +  G Y KA E    AI L+    E +   ++ Y  L
Sbjct: 91  DFDKVIELSPQEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYL 150

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
              +KAL+ +   + ++   +  Y  +GLL + + ++ +AIK+    + IDP+ ++
Sbjct: 151 KTYDKALDNINAAIKLNSNSASLYMQKGLLYYSVNKYTEAIKEYEKSIQIDPNYVQ 206



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI ++ ++IQ +P+  +++K        L + +EA+  L++A+   P+   +   RG + 
Sbjct: 190 AIKEYEKSIQIDPNYVQSYKGLISIYGILEQDIEALDLLNRAIAINPDYI-LYRNRGWIL 248

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            K   +  A++D +  +KL+  N  +Y   GL    +  YKKA E    AI+   N
Sbjct: 249 CKLNRYEEAIKDCTKSIKLNHINSISYYIRGLIYLELKLYKKAIEDFDNAIKFITN 304


>gi|384208546|ref|YP_005594266.1| hypothetical protein Bint_1063 [Brachyspira intermedia PWS/A]
 gi|343386196|gb|AEM21686.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 424

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 146/316 (46%), Gaps = 41/316 (12%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA+   G +  AI+ +++ ++ D  Y E    R    +     EAA+ D+ + I+  P+
Sbjct: 41  GIAKQALGLFEEAINYYNKGIEVDENYAELYYNRANCESNLGLYEAAVKDYDKVIELVPT 100

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +A+  RG A+  LG   EAI+D+ KA+  + N+ D   +R  +    K +  A+ED  
Sbjct: 101 HSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYK 160

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--------------------- 546
             ++LD     AY  +G A  SIG Y++A   + K I+L                     
Sbjct: 161 KVLELDDTEVYAYNGIGDAKRSIGLYEEAITYYNKVIELSNGNSSYAYNNRGACKIGLGL 220

Query: 547 ------DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK----------AYH 589
                 D N  LE +   T  Y +   +E  LE  ++ +   K F K          AY+
Sbjct: 221 YNEAIIDINKALEIYDEYTDAYNNRGTAEYNLELYKEAI---KDFDKAIELSPQYFYAYN 277

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            RG     LG ++ AI+D +  + I+P  I+  Y RA   + +G + EA+KDYD  ++L+
Sbjct: 278 NRGNAKSALGLYEDAIEDFNKAISIEPQYIDAYYNRAIAKNNMGLHNEAVKDYDMVIELD 337

Query: 650 LDSMEKFVLQCLAFYQ 665
            + +  +  + L++Y 
Sbjct: 338 NNHINAYYNRGLSYYN 353



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 137/273 (50%), Gaps = 1/273 (0%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S ++D  + R   ++   KY  AI  + ++L+ D     A  G G A+      E AI+ 
Sbjct: 133 SNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAITY 192

Query: 438 FTEAIQ-SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           + + I+ SN ++  A+  RG  +  LG   EAI D++KALE      D  + RG   +  
Sbjct: 193 YNKVIELSNGNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAEYNL 252

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           + +  A++D    ++L  +   AY   G A S++G Y+ A E   KAI ++  +++A+ +
Sbjct: 253 ELYKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFNKAISIEPQYIDAYYN 312

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                 ++    +A++    V+ +D     AY+ RGL  + L  +++AIK+    + ++ 
Sbjct: 313 RAIAKNNMGLHNEAVKDYDMVIELDNNHINAYYNRGLSYYNLADYEEAIKNYDRVIELNS 372

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
              +    R    +++G Y EA++DYD A++++
Sbjct: 373 KLADAYNNRGFAKYSMGLYEEAVRDYDKAIEID 405



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 108/232 (46%), Gaps = 34/232 (14%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  ++  G Y  AI   ++ L+    Y +A   RGTA       + AI DF +AI+ +
Sbjct: 210 NRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAEYNLELYKEAIKDFDKAIELS 269

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A++ALG   +AI+D +KA+  EP   D  + R I        N AV+D
Sbjct: 270 PQYFYAYNNRGNAKSALGLYEDAIEDFNKAISIEPQYIDAYYNRAIAKNNMGLHNEAVKD 329

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD  + +AY   GL+  ++ +Y                                
Sbjct: 330 YDMVIELDNNHINAYYNRGLSYYNLADY-------------------------------- 357

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             E+A++   +V+ ++ + + AY+ RG   + +G +++A++D    + IDP+
Sbjct: 358 --EEAIKNYDRVIELNSKLADAYNNRGFAKYSMGLYEEAVRDYDKAIEIDPN 407



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 87/168 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ N   Y  AI  FD+ ++  P Y  A   RG A++     E AI DF +AI   
Sbjct: 244 NRGTAEYNLELYKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFNKAISIE 303

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  R  A+  +G   EA++D    +E + N  +  + RG+  +   D+  A+++
Sbjct: 304 PQYIDAYYNRAIAKNNMGLHNEAVKDYDMVIELDNNHINAYYNRGLSYYNLADYEEAIKN 363

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
               ++L+ +   AY   G A  S+G Y++A   + KAI++D N+ +A
Sbjct: 364 YDRVIELNSKLADAYNNRGFAKYSMGLYEEAVRDYDKAIEIDPNYEKA 411



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 2/184 (1%)

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           E G+  F+   F  A E     +K D  N   Y YLG+A  ++G +++A   + K I++D
Sbjct: 5   EEGLQLFRETQFEKASELFLKALKEDANNSEIYNYLGIAKQALGLFEEAINYYNKGIEVD 64

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            N+ E + +      +L   E A++   +V+ +    SKAY  RG     LG +++AIKD
Sbjct: 65  ENYAELYYNRANCESNLGLYEAAVKDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKD 124

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           +   + +D +NI+    RA       +Y EAI+DY     LELD  E +    +   ++ 
Sbjct: 125 IDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKV--LELDDTEVYAYNGIGDAKRS 182

Query: 668 IALY 671
           I LY
Sbjct: 183 IGLY 186



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 35/256 (13%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           + + E A   F +A++ + +  E +   G A+ ALG   EAI   +K +E + N A++ +
Sbjct: 13  ETQFEKASELFLKALKEDANNSEIYNYLGIAKQALGLFEEAINYYNKGIEVDENYAELYY 72

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            R         + AAV+D    ++L   +  AY   G A  ++G Y++A +   KAI LD
Sbjct: 73  NRANCESNLGLYEAAVKDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLD 132

Query: 548 RNFLEAWGHLT-------QFYQDLANSEKALEC---------------------LQQVLY 579
            N ++A+           ++ + + + +K LE                       + + Y
Sbjct: 133 SNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAITY 192

Query: 580 IDKRF-------SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
            +K         S AY+ RG    GLG + +AI D++  L I     +    R +  + +
Sbjct: 193 YNKVIELSNGNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAEYNL 252

Query: 633 GEYREAIKDYDAALDL 648
             Y+EAIKD+D A++L
Sbjct: 253 ELYKEAIKDFDKAIEL 268



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 3/116 (2%)

Query: 369 CVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +   +K+ SI    +D   +R IA+ N G +  A+  +D +++ D  +  A   RG + 
Sbjct: 292 AIEDFNKAISIEPQYIDAYYNRAIAKNNMGLHNEAVKDYDMVIELDNNHINAYYNRGLSY 351

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
               + E AI ++   I+ N    +A+  RG A+ ++G   EA++D  KA+E +PN
Sbjct: 352 YNLADYEEAIKNYDRVIELNSKLADAYNNRGFAKYSMGLYEEAVRDYDKAIEIDPN 407



 Score = 46.2 bits (108), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 32/56 (57%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           NR      LEL+K  I+D DKA++L P    AY  +G A SALG  E+A+  + K 
Sbjct: 244 NRGTAEYNLELYKEAIKDFDKAIELSPQYFYAYNNRGNAKSALGLYEDAIEDFNKA 299



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++  ++K I + D   A+ Y      NRA C S L L++  ++D DK ++L PT  +AY 
Sbjct: 53  AINYYNKGIEV-DENYAELY-----YNRANCESNLGLYEAAVKDYDKVIELVPTHSKAYD 106

Query: 108 LKGCAFSALGRKEEAL 123
            +G A   LG  EEA+
Sbjct: 107 DRGYAKGNLGYYEEAI 122


>gi|254417606|ref|ZP_05031343.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196175628|gb|EDX70655.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 909

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 125/265 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGI  +N  +Y  AI+ +DQ +  +P   +A   RG A       E AI+ + +AI  NP
Sbjct: 298 RGIVLINLKRYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQAIALNP 357

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG A   L    EAI    +A+   P++ +  + RG      + +  A+   
Sbjct: 358 DDYQAWNNRGVALGNLERYEEAIASYDQAIALNPDNYEAWNNRGNTLRNLERYEEAIASY 417

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + L+ +N  A+   G  L ++  Y++A  ++ KA+ L+ +  EAW +      +L  
Sbjct: 418 DKALALNPDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGGALGNLER 477

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+    Q + ++  +S A++ RG  L  L ++++AI      L ++P +    Y R 
Sbjct: 478 YEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLERYEEAIASYDQALALNPDDSSAWYNRG 537

Query: 627 SCYHAIGEYREAIKDYDAALDLELD 651
                +  Y EAI  YD AL L  D
Sbjct: 538 VTLDDLERYEEAIVSYDQALALNPD 562



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 151/319 (47%), Gaps = 7/319 (2%)

Query: 336 NKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQV 392
           ++SS+S E+ +KL F+  +L  + N+ ++     +    ++ +++ D   +   RGI   
Sbjct: 214 DESSNSPETTAKLYFEHGLLFFSGNQDEK----ALASFDQAIALNPDDYQAWNRRGIVLR 269

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
              +Y  AI+ FDQ +  +P Y +A  GRG      +  E AI+ + +AI  NP   +AW
Sbjct: 270 RLERYEEAIASFDQAITLNPDYYKAWNGRGIVLINLKRYEEAIASYDQAIALNPDDYQAW 329

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             RG A   L    EAI    +A+   P+     + RG+     + +  A+      + L
Sbjct: 330 NNRGVALGNLERYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQAIAL 389

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           + +N  A+   G  L ++  Y++A  ++ KA+ L+ +  EAW +     ++L   E+A+ 
Sbjct: 390 NPDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGNTLRNLERYEEAIA 449

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + L ++    +A++ RG  L  L ++++AI      + ++P        R +    +
Sbjct: 450 SYDKALALNPDNYEAWNNRGGALGNLERYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNL 509

Query: 633 GEYREAIKDYDAALDLELD 651
             Y EAI  YD AL L  D
Sbjct: 510 ERYEEAIASYDQALALNPD 528



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 14/298 (4%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N  +Y  AI+ +DQ +  +P   +A   RG A       E AI+ + +AI  N
Sbjct: 331 NRGVALGNLERYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQAIALN 390

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG     L    EAI    KAL   P++ +  + RG      + +  A+  
Sbjct: 391 PDNYEAWNNRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGNTLRNLERYEEAIAS 450

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L+ +N  A+   G AL ++  Y++A  +  +AI L+ ++  AW +      +L 
Sbjct: 451 YDKALALNPDNYEAWNNRGGALGNLERYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLE 510

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    Q L ++   S A++ RG+ L  L ++++AI      L ++P +       
Sbjct: 511 RYEEAIASYDQALALNPDDSSAWYNRGVTLDDLERYEEAIVSYDQALALNPDDSSVWNNH 570

Query: 626 ASCYHAIGEYREAIKDYDAALDLE-------------LDSMEKFVLQCLAFYQKEIAL 670
            +    +  Y EAI  YD A+ L              LD +E++  + +A Y + IAL
Sbjct: 571 GNTLGNLDRYEEAIASYDQAIALNPDDSSVWNNHGVTLDDLERYE-EAIASYDQAIAL 627



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 5/291 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    N  +Y  AI+ +D+ L  +P   EA   RG A       E AI+ F +AI  N
Sbjct: 433 NRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGGALGNLERYEEAIASFDQAIDLN 492

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG     L    EAI    +AL   P+ +   + RG+     + +  A+  
Sbjct: 493 PDYSSAWNNRGNTLGNLERYEEAIASYDQALALNPDDSSAWYNRGVTLDDLERYEEAIVS 552

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L+ ++ S +   G  L ++  Y++A  ++ +AI L+ +    W +      DL 
Sbjct: 553 YDQALALNPDDSSVWNNHGNTLGNLDRYEEAIASYDQAIALNPDDSSVWNNHGVTLDDLE 612

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    Q + ++   S  ++ RG+ L  L +++KAI      + ++P +    ++R
Sbjct: 613 RYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLKKYEKAIASYDQAITLNPDDSSAWFMR 672

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
                 + +Y EAI  YD A+ L  D  + +      L+ L  Y++ IA Y
Sbjct: 673 GIALRNLEKYEEAIASYDQAIALNPDFYQAWFNRGNTLRNLERYEEAIASY 723



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 5/289 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N  +Y  AI+ FDQ +  +P Y  A   RG         E AI+ + +A+  N
Sbjct: 467 NRGGALGNLERYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLERYEEAIASYDQALALN 526

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG     L    EAI    +AL   P+ + + +  G        +  A+  
Sbjct: 527 PDDSSAWYNRGVTLDDLERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNLDRYEEAIAS 586

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L+ ++ S +   G+ L  +  Y++A  ++ +AI L+ +    W +      +L 
Sbjct: 587 YDQAIALNPDDSSVWNNHGVTLDDLERYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLK 646

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             EKA+    Q + ++   S A+ +RG+ L  L ++++AI      + ++P   +  + R
Sbjct: 647 KYEKAIASYDQAITLNPDDSSAWFMRGIALRNLEKYEEAIASYDQAIALNPDFYQAWFNR 706

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIA 669
            +    +  Y EAI  YD A+ L  D    + ++ +A      Y++ IA
Sbjct: 707 GNTLRNLERYEEAIASYDQAIALNPDDSSAWFMRGIALGNLERYEEAIA 755



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 10/308 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQS 444
           +RG    N  +Y  AI+ +D+ L  +P   EA   RG T R  +R  E AI+ + +A+  
Sbjct: 399 NRGNTLRNLERYEEAIASYDKALALNPDNYEAWNNRGNTLRNLER-YEEAIASYDKALAL 457

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   EAW  RG A   L    EAI    +A++  P+ +   + RG      + +  A+ 
Sbjct: 458 NPDNYEAWNNRGGALGNLERYEEAIASFDQAIDLNPDYSSAWNNRGNTLGNLERYEEAIA 517

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                + L+ ++ SA+   G+ L  +  Y++A  ++ +A+ L+ +    W +      +L
Sbjct: 518 SYDQALALNPDDSSAWYNRGVTLDDLERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNL 577

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+A+    Q + ++   S  ++  G+ L  L ++++AI      + ++P +      
Sbjct: 578 DRYEEAIASYDQAIALNPDDSSVWNNHGVTLDDLERYEEAIASYDQAIALNPDDSNVWNN 637

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDS-----MEKFVLQCLAFYQKEIALY-TASKINS 678
           R      + +Y +AI  YD A+ L  D      M    L+ L  Y++ IA Y  A  +N 
Sbjct: 638 RGVTLGNLKKYEKAIASYDQAITLNPDDSSAWFMRGIALRNLEKYEEAIASYDQAIALNP 697

Query: 679 EF--CWFD 684
           +F   WF+
Sbjct: 698 DFYQAWFN 705



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 116/245 (47%), Gaps = 6/245 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   +  +Y  AI  +DQ L  +P         G         E AI+ + +AI  N
Sbjct: 535 NRGVTLDDLERYEEAIVSYDQALALNPDDSSVWNNHGNTLGNLDRYEEAIASYDQAIALN 594

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     W   G     L    EAI    +A+   P+ +++ + RG+     K +  A+  
Sbjct: 595 PDDSSVWNNHGVTLDDLERYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLKKYEKAIAS 654

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L+ ++ SA+   G+AL ++ +Y++A  ++ +AI L+ +F +AW +     ++L 
Sbjct: 655 YDQAITLNPDDSSAWFMRGIALRNLEKYEEAIASYDQAIALNPDFYQAWFNRGNTLRNLE 714

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP------SNI 619
             E+A+    Q + ++   S A+ +RG+ L  L ++++AI   +  + + P      +N+
Sbjct: 715 RYEEAIASYDQAIALNPDDSSAWFMRGIALGNLERYEEAIASFNQAIALTPDDSTAWNNL 774

Query: 620 ECLYL 624
             LYL
Sbjct: 775 GFLYL 779



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 118/266 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    N  +Y  AI+ +DQ L  +P    A   RG         E AI  + +A+  N
Sbjct: 501 NRGNTLGNLERYEEAIASYDQALALNPDDSSAWYNRGVTLDDLERYEEAIVSYDQALALN 560

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     W   G     L    EAI    +A+   P+ + + +  G+     + +  A+  
Sbjct: 561 PDDSSVWNNHGNTLGNLDRYEEAIASYDQAIALNPDDSSVWNNHGVTLDDLERYEEAIAS 620

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L+ ++ + +   G+ L ++ +Y+KA  ++ +AI L+ +   AW       ++L 
Sbjct: 621 YDQAIALNPDDSNVWNNRGVTLGNLKKYEKAIASYDQAITLNPDDSSAWFMRGIALRNLE 680

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    Q + ++  F +A+  RG  L  L ++++AI      + ++P +    ++R
Sbjct: 681 KYEEAIASYDQAIALNPDFYQAWFNRGNTLRNLERYEEAIASYDQAIALNPDDSSAWFMR 740

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
                 +  Y EAI  ++ A+ L  D
Sbjct: 741 GIALGNLERYEEAIASFNQAIALTPD 766



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 3/214 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI+ +DQ +  +P        RG      ++ E AI+ + +AI  NP    AW  R
Sbjct: 613 RYEEAIASYDQAIALNPDDSNVWNNRGVTLGNLKKYEKAIASYDQAITLNPDDSSAWFMR 672

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   L +  EAI    +A+   P+       RG      + +  A+      + L+ +
Sbjct: 673 GIALRNLEKYEEAIASYDQAIALNPDFYQAWFNRGNTLRNLERYEEAIASYDQAIALNPD 732

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           + SA+   G+AL ++  Y++A  +  +AI L  +   AW +L   Y      +KA   L 
Sbjct: 733 DSSAWFMRGIALGNLERYEEAIASFNQAIALTPDDSTAWNNLGFLYLMQNQPQKAKSSLN 792

Query: 576 QVLYIDKRFSKAYHLRGL-LLHGLGQHKKAIKDL 608
           + L I+  F   Y L  L L+H +  + K  K L
Sbjct: 793 RSLQINANF--FYPLFNLGLVHVIDNNIKEAKRL 824



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 3/119 (2%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQ 70
           RL +  + I   D+ + ++     A   R  +  L +L+ + +AI   D  +A + +  Q
Sbjct: 270 RLERYEEAIASFDQAITLNPDYYKAWNGRGIV--LINLKRYEEAIASYDQAIALNPDDYQ 327

Query: 71  DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
              NR      LE ++  I   D+A+ L+P   QA+  +G A   L R EEA++ +++ 
Sbjct: 328 AWNNRGVALGNLERYEEAIASYDQAIALNPDDYQAWNNRGVALGNLERYEEAIASYDQA 386


>gi|334116937|ref|ZP_08491029.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
 gi|333461757|gb|EGK90362.1| serine/threonine protein kinase [Microcoleus vaginatus FGP-2]
          Length = 804

 Score =  109 bits (272), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 153/330 (46%), Gaps = 12/330 (3%)

Query: 338 SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKY 397
           SSDS  SR    F W +L      A     F  +  S+   I        G+ +      
Sbjct: 373 SSDSFSSRLGSRFWWLILAGLG--AVIVLIFLFSYGSRPNPIKAKEYYELGVEKARNQDA 430

Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
            +A+  F++ ++ +P   E+   RG A    ++ + AI+D+++AI  NP   +A+  RG 
Sbjct: 431 DAALQAFNKSIQLNPKNAESFYQRGNANYDLKKYQEAIADYSQAIALNPKYVQAYFNRGL 490

Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
           AR    +   AI+D ++AL  +PN AD  +ERGI   + +D+  A++D +A ++L     
Sbjct: 491 ARNDFNDKRGAIEDYTQALNLQPNDADTYYERGIAYLEQQDYKTAIQDFNAVIRLQPNLV 550

Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
            AY   GLA +   + + A   + +AI++D   ++A+    +    L + + AL    QV
Sbjct: 551 KAYHSRGLARAGSADLQGAIGDYTEAIKIDAKNVDAFYSRGRARFHLGDYQGALADYSQV 610

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID-----PSNIECLYLRASCYHAI 632
           + ID + + AY  R      LG H+ AI D +  + +      P N  C+      Y  +
Sbjct: 611 IAIDPKSADAYANRCSTQLNLGAHQAAIDDCTQAISLSDEDGVPYNNRCI-----AYLNL 665

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            +Y +AI D   AL +  +    +  + LA
Sbjct: 666 KDYPKAIADCTQALKVNPNDYNAYNNRALA 695



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 34/261 (13%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D    RGIA + +  Y +AI  F+ +++  P   +A   RG ARA   +L+ AI D+TEA
Sbjct: 517 DTYYERGIAYLEQQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSADLQGAIGDYTEA 576

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL--------------- 486
           I+ +    +A+  RG+AR  LG+   A+ D S+ +  +P SAD                 
Sbjct: 577 IKIDAKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQA 636

Query: 487 -------------------HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
                              + R I     KD+  A+ D +  +K++  + +AY    LA 
Sbjct: 637 AIDDCTQAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALAR 696

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
           S+ G+ + A      AI  + N  EA+ +  + YQ+L N   A+    Q + I   ++ A
Sbjct: 697 STGGDPQGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAA 756

Query: 588 YHLRGLLLHGLGQHKKAIKDL 608
           Y+ RG++   LG    AI DL
Sbjct: 757 YYGRGIVRRSLGDKAGAISDL 777



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 135/301 (44%), Gaps = 6/301 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A  +  KY  AI+ + Q +  +P Y +A   RG AR    +   AI D+T+A+   P
Sbjct: 454 RGNANYDLKKYQEAIADYSQAIALNPKYVQAYFNRGLARNDFNDKRGAIEDYTQALNLQP 513

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  + +  RG A     +   AIQD +  +  +PN     H RG+      D   A+ D 
Sbjct: 514 NDADTYYERGIAYLEQQDYKTAIQDFNAVIRLQPNLVKAYHSRGLARAGSADLQGAIGDY 573

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +K+D +N  A+   G A   +G+Y+ A   + + I +D    +A+ +      +L  
Sbjct: 574 TEAIKIDAKNVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGA 633

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + A++   Q + +       Y+ R +    L  + KAI D +  L ++P++      RA
Sbjct: 634 HQAAIDDCTQAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRA 693

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-ASKINSEF 680
                 G+ + AI D+ AA+    ++ E +     + Q L  Y   IA Y  A +I+  +
Sbjct: 694 LARSTGGDPQGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNY 753

Query: 681 C 681
            
Sbjct: 754 A 754



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 2/211 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +VD   SRG A+ + G Y  A++ + Q++  DP   +A   R + +      +AAI D T
Sbjct: 583 NVDAFYSRGRARFHLGDYQGALADYSQVIAIDPKSADAYANRCSTQLNLGAHQAAIDDCT 642

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI  +   G  +  R  A   L +  +AI D ++AL+  PN  +  + R +      D 
Sbjct: 643 QAISLSDEDGVPYNNRCIAYLNLKDYPKAIADCTQALKVNPNDYNAYNNRALARSTGGDP 702

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ D +A +  +  N  AY         +  Y  A   +++AI++  N+  A+     
Sbjct: 703 QGAIADFTAAIGFNPNNAEAYANRAKIYQELKNYNSAIADYVQAIRISPNYAAAYYGRGI 762

Query: 560 FYQDLANSEKALECLQQV--LYIDKRFSKAY 588
             + L +   A+  L++   +++D+  +  Y
Sbjct: 763 VRRSLGDKAGAISDLEKAGKMFLDQGLTGGY 793


>gi|449125236|ref|ZP_21761538.1| hypothetical protein HMPREF9723_01582 [Treponema denticola OTK]
 gi|448939205|gb|EMB20122.1| hypothetical protein HMPREF9723_01582 [Treponema denticola OTK]
          Length = 329

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 132/247 (53%), Gaps = 1/247 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  + + ++ DP Y EA + RG    +  E E A++DF + I+ +P   +A+  +G   
Sbjct: 54  AIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALADFDKVIELSPQEDKAYYFKGLLF 113

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G   +AI++L+ A+       +    R  +    K ++ A+++++A +KL+  + S 
Sbjct: 114 NDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYLKTYDKALDNINAAIKLNSNSASL 173

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   GL   S+ +Y +A + + K+IQ+D N+++++  L   Y  L    +AL+ L + + 
Sbjct: 174 YMQKGLLYYSVNKYTEAIKEYEKSIQIDPNYVQSYKCLISIYGILEQDIEALDLLNRAIA 233

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I+  +   Y  RG +L  L ++++AIKD +  + ++  N    Y+R   Y  +  Y++AI
Sbjct: 234 INPDYI-LYRNRGWILCKLNRYEEAIKDCTKSIKLNHINSISYYIRGLIYLELKLYKKAI 292

Query: 640 KDYDAAL 646
           +D+D A+
Sbjct: 293 EDFDNAI 299



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 82/181 (45%), Gaps = 3/181 (1%)

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N S  E +   G       +   AI   +KA+E +P   +    RG + +   +   A+ 
Sbjct: 31  NYSQAEYFNMAGSTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKALA 90

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++L  +   AY + GL  +  G Y KA E    AI L+    E +   ++ Y  L
Sbjct: 91  DFDKVIELSPQEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGYL 150

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE---C 621
              +KAL+ +   + ++   +  Y  +GLL + + ++ +AIK+    + IDP+ ++   C
Sbjct: 151 KTYDKALDNINAAIKLNSNSASLYMQKGLLYYSVNKYTEAIKEYEKSIQIDPNYVQSYKC 210

Query: 622 L 622
           L
Sbjct: 211 L 211



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 81/153 (52%), Gaps = 3/153 (1%)

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           +N S   Y  +A S+  E K    A   + KAI+ D  ++EA+ +  + Y  +   EKAL
Sbjct: 30  QNYSQAEYFNMAGSTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVHEGEKAL 89

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               +V+ +  +  KAY+ +GLL +  G + KAI++L++ + ++  + E    R+  Y  
Sbjct: 90  ADFDKVIELSPQEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSKIYGY 149

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
           +  Y +A+ + +AA+ L  +S   ++ + L +Y
Sbjct: 150 LKTYDKALDNINAAIKLNSNSASLYMQKGLLYY 182



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI ++ ++IQ +P+  +++K        L + +EA+  L++A+   P+   +   RG + 
Sbjct: 190 AIKEYEKSIQIDPNYVQSYKCLISIYGILEQDIEALDLLNRAIAINPDYI-LYRNRGWIL 248

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            K   +  A++D +  +KL+  N  +Y   GL    +  YKKA E    AI+   N
Sbjct: 249 CKLNRYEEAIKDCTKSIKLNHINSISYYIRGLIYLELKLYKKAIEDFDNAIKFITN 304


>gi|427730129|ref|YP_007076366.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
 gi|427366048|gb|AFY48769.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
          Length = 548

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 151/307 (49%), Gaps = 14/307 (4%)

Query: 315 SASLNDSNTNSESYSKSSIS--DNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTR 372
           ++SL  S  N E   K +IS  +N    S +   +L+  +  L    +E     ++ V+ 
Sbjct: 218 NSSLLPSEPNQEQLLKPAISRPNNNHVSSYKQDEQLNLDYTKL---GDEYFSKGEYTVSI 274

Query: 373 ISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
              ++++ ++   S     RG+A    G Y +AI+ + Q++K +    +A   RG A + 
Sbjct: 275 NHYNQALKLNINDSELYYKRGLAYYQIGNYEAAIADYSQVIKINLHDAKAYHKRGLALSQ 334

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
               EAAI D+TE+I+ NP A  A+K R + R+ LG++  AI+D ++A++  P  AD   
Sbjct: 335 LGAYEAAIDDYTESIRLNPHAAVAYKHRAEVRSYLGDNQGAIEDYTQAIKINPQYADTYK 394

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RGI  +            +  ++L+  + +AY   G A + IG+Y  A E + +AIQ++
Sbjct: 395 NRGIARYIL----GTQPGFTQAIQLNPNDANAYKNRGNARADIGDYAGAIEDYTQAIQIN 450

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
               +A+ +      DL ++E A++   Q + ++  ++ AY+ RG +   L     AI D
Sbjct: 451 PYLADAYYNRGNARYDLGDNEGAIDDYTQAIQVNPNYADAYYNRGNIYAELKNQPDAIAD 510

Query: 608 LSSGLGI 614
             +   I
Sbjct: 511 FQTAADI 517



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 124/255 (48%), Gaps = 4/255 (1%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G+Y  +I+ ++Q LK +    E    RG A       EAAI+D+++ I+ N    +A+ 
Sbjct: 267 KGEYTVSINHYNQALKLNINDSELYYKRGLAYYQIGNYEAAIADYSQVIKINLHDAKAYH 326

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           +RG A + LG    AI D ++++   P++A     R  V     D   A+ED +  +K++
Sbjct: 327 KRGLALSQLGAYEAAIDDYTESIRLNPHAAVAYKHRAEVRSYLGDNQGAIEDYTQAIKIN 386

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +    Y   G+A   +G     +    +AIQL+ N   A+ +      D+ +   A+E 
Sbjct: 387 PQYADTYKNRGIARYILG----TQPGFTQAIQLNPNDANAYKNRGNARADIGDYAGAIED 442

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             Q + I+   + AY+ RG   + LG ++ AI D +  + ++P+  +  Y R + Y  + 
Sbjct: 443 YTQAIQINPYLADAYYNRGNARYDLGDNEGAIDDYTQAIQVNPNYADAYYNRGNIYAELK 502

Query: 634 EYREAIKDYDAALDL 648
              +AI D+  A D+
Sbjct: 503 NQPDAIADFQTAADI 517



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 4/130 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+   G        F Q ++ +P    A   RG ARA   +   AI D+T+AIQ N
Sbjct: 395 NRGIARYILGTQPG----FTQAIQLNPNDANAYKNRGNARADIGDYAGAIEDYTQAIQIN 450

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG AR  LG++  AI D ++A++  PN AD  + RG +  + K+   A+ D
Sbjct: 451 PYLADAYYNRGNARYDLGDNEGAIDDYTQAIQVNPNYADAYYNRGNIYAELKNQPDAIAD 510

Query: 506 LSACVKLDKE 515
                 + ++
Sbjct: 511 FQTAADIYRQ 520



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 69/138 (50%)

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           K D++    YT LG    S GEY  +   + +A++L+ N  E +      Y  + N E A
Sbjct: 248 KQDEQLNLDYTKLGDEYFSKGEYTVSINHYNQALKLNINDSELYYKRGLAYYQIGNYEAA 307

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           +    QV+ I+   +KAYH RGL L  LG ++ AI D +  + ++P        RA    
Sbjct: 308 IADYSQVIKINLHDAKAYHKRGLALSQLGAYEAAIDDYTESIRLNPHAAVAYKHRAEVRS 367

Query: 631 AIGEYREAIKDYDAALDL 648
            +G+ + AI+DY  A+ +
Sbjct: 368 YLGDNQGAIEDYTQAIKI 385


>gi|386002402|ref|YP_005920701.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
 gi|357210458|gb|AET65078.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
          Length = 1348

 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 145/280 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A  ++GKY  AI  +D+ ++  P Y +A   +G A   Q + + AI    EAI  +
Sbjct: 269 NKGVALNSQGKYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLD 328

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     W  +G A    G+S EAI+   +A+   P  AD  + +G+       ++ A++ 
Sbjct: 329 PENANGWNIKGVALYNRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQT 388

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD E+ +A+   GL L++ G+Y +A +A  +AI+L+  +++AW          +
Sbjct: 389 FNETIRLDPEHVAAWYNKGLTLNNQGKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQS 448

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A++   +V+ ++  ++ A++ +G   +  G++ +AIK     +  +P   +    +
Sbjct: 449 RYDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIRRNPEYADAWNNK 508

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                ++ +Y EAI+ +D A  L  +  + ++ + +AFY 
Sbjct: 509 GVALVSLDKYEEAIQAFDEATRLNPEDADAWLKKGVAFYH 548



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 138/273 (50%), Gaps = 14/273 (5%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD   S+G A  ++ +Y  AI  +D+++K +P Y +A   +GTA   Q     AI  F E
Sbjct: 434 VDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDE 493

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF- 499
           AI+ NP   +AW  +G A  +L +  EAIQ   +A    P  AD   ++G+  +    + 
Sbjct: 494 AIRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPEDADAWLKKGVAFYHLGKYK 553

Query: 500 ------NAAVEDLSACVKLDKENKSA-------YTYLGLALSSIGEYKKAEEAHLKAIQL 546
                 N +++     ++ + E+ +A           GLAL ++ +Y+ A +A+ +AI L
Sbjct: 554 ETIQVCNVSIQAYDDDLRWNPEDANARLSKGIALMLKGLALETLDKYEDAVQAYDEAISL 613

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           + + + AW +       L   ++A++   +VL ++   + A+  +G  LH L +H++++K
Sbjct: 614 NPDDVAAWENRGAALYSLGKYDEAVQAYDEVLRLNPEDANAWKKKGYALHSLEEHEESVK 673

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
            L   + ++P++  C  +++     I +Y EAI
Sbjct: 674 ALDEAIRLNPNDAGCWLIKSFNLLIIEKYDEAI 706



 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 152/315 (48%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+G A  ++G Y  AI  +++ ++ DP +      +G     Q + E AI  + EAI+ N
Sbjct: 167 SKGYALYSQGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLN 226

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    +W  +G A   LG+  EAI+  ++A+  +P +    H +G+       ++ A++ 
Sbjct: 227 PEDLNSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQA 286

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L  E   A+   G AL   G+Y +A +A  +AI LD      W        +  
Sbjct: 287 YDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALYNRG 346

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            S++A++   + + +   ++ A++ +GL L   G++ +AI+  +  + +DP ++   Y +
Sbjct: 347 KSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAAWYNK 406

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
               +  G+Y EAI+ +D A+ L  + ++       A+Y K  AL + S+ +     +D 
Sbjct: 407 GLTLNNQGKYDEAIQAFDEAIRLNPEYVD-------AWYSKGNALDSQSRYDEAIQAYDE 459

Query: 686 DGDIDPLFKEYWCKR 700
              ++P + + W  +
Sbjct: 460 VIKLNPEYADAWNSK 474



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 129/263 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A   +GKY  AI  +++ ++ DP Y  A   +G A   Q + + AI  + EAI+  
Sbjct: 99  NKGLAFEKQGKYDEAIKAYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLY 158

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  +G A  + G   EAI+  ++A+  +P        +G   F    +  A+  
Sbjct: 159 PEYANAWNSKGYALYSQGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYA 218

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L+ E+ +++   G AL  +G+Y +A  A  +AI+LD   + AW +         
Sbjct: 219 YDEAIRLNPEDLNSWINKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQG 278

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A++   + + +   ++ A++ +G  L   G++ +AI+  +  + +DP N     ++
Sbjct: 279 KYDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIK 338

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
               +  G+  EAIK YD A+ L
Sbjct: 339 GVALYNRGKSDEAIKAYDEAIRL 361



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 24/265 (9%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+   N+GKY  AI  FD+ ++ +P Y +A   +G A   Q   + AI  + E I+ N
Sbjct: 405 NKGLTLNNQGKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDEVIKLN 464

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  +G A  + G   EAI+   +A+   P  AD  + +G+       +  A++ 
Sbjct: 465 PEYADAWNSKGTAFNSQGRYNEAIKAFDEAIRRNPEYADAWNNKGVALVSLDKYEEAIQA 524

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                +L+ E+  A+   G+A   +G+YK       + IQ+    ++A+    ++  + A
Sbjct: 525 FDEATRLNPEDADAWLKKGVAFYHLGKYK-------ETIQVCNVSIQAYDDDLRWNPEDA 577

Query: 566 NSEKALECLQQVLYIDKRFSK--AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           N+               R SK  A  L+GL L  L +++ A++     + ++P ++    
Sbjct: 578 NA---------------RLSKGIALMLKGLALETLDKYEDAVQAYDEAISLNPDDVAAWE 622

Query: 624 LRASCYHAIGEYREAIKDYDAALDL 648
            R +  +++G+Y EA++ YD  L L
Sbjct: 623 NRGAALYSLGKYDEAVQAYDEVLRL 647



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 152/316 (48%), Gaps = 7/316 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +++G A    GKY  AI   ++ ++ DP    A   +G A   Q + + AI  + EAI+ 
Sbjct: 234 INKGAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQAYDEAIRL 293

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P   +AW R+G+A    G+  EAIQ  ++A+  +P +A+  + +G+  +     + A++
Sbjct: 294 SPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALYNRGKSDEAIK 353

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++L  E   A+   GL+L S G+Y +A +   + I+LD   + AW +      + 
Sbjct: 354 AYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAAWYNKGLTLNNQ 413

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A++   + + ++  +  A++ +G  L    ++ +AI+     + ++P   +    
Sbjct: 414 GKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEYADAWNS 473

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           + + +++ G Y EAIK +D A+    +  +       A+  K +AL +  K       FD
Sbjct: 474 KGTAFNSQGRYNEAIKAFDEAIRRNPEYAD-------AWNNKGVALVSLDKYEEAIQAFD 526

Query: 685 IDGDIDPLFKEYWCKR 700
               ++P   + W K+
Sbjct: 527 EATRLNPEDADAWLKK 542



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 117/234 (50%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P+    +G A   Q   + AI D+ EAI+ +P     W  +G A    G+  EAI+  ++
Sbjct: 60  PDEWNNKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIKAYNE 119

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A+  +P  A+  H +G   +    ++ A++  +  ++L  E  +A+   G AL S G Y 
Sbjct: 120 AIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQGNYD 179

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           +A +A+ +AI+LD  F+  W +           E A+    + + ++     ++  +G  
Sbjct: 180 EAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWINKGAA 239

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           L+ LG++ +AI+  +  + +DP N+   + +    ++ G+Y EAI+ YD A+ L
Sbjct: 240 LYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQAYDEAIRL 293



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 136/281 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A   +G Y  AI  + + ++ DP +      +G A   Q + + AI  + EAI+ +
Sbjct: 65  NKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIKAYNEAIRLD 124

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  +G A    G+  EAI+  ++A+   P  A+  + +G   +   +++ A++ 
Sbjct: 125 PEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQGNYDEAIKA 184

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD E    +   G  L S G+Y+ A  A+ +AI+L+   L +W +       L 
Sbjct: 185 YNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWINKGAALYRLG 244

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    + + +D     A+H +G+ L+  G++ +AI+     + + P   +    +
Sbjct: 245 KYDEAIRASNEAIRLDPENVYAWHNKGVALNSQGKYDEAIQAYDEAIRLSPEYADAWNRK 304

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
                  G+Y EAI+  + A+ L+ ++   + ++ +A Y +
Sbjct: 305 GEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALYNR 345



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 35/300 (11%)

Query: 384 RLSRGIAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
           RLS+GIA + +G       KY  A+  +D+ +  +P    A   RG A     + + A+ 
Sbjct: 580 RLSKGIALMLKGLALETLDKYEDAVQAYDEAISLNPDDVAAWENRGAALYSLGKYDEAVQ 639

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNF 494
            + E ++ NP    AWK++G A  +L E  E+++ L +A+   PN A   ++    ++  
Sbjct: 640 AYDEVLRLNPEDANAWKKKGYALHSLEEHEESVKALDEAIRLNPNDAGCWLIKSFNLLII 699

Query: 495 KFKD------------FNAAVEDLSACVKLDKENKSA--------------YTYLGLALS 528
           +  D            +N  +      V L+ EN +A              +   G+ L 
Sbjct: 700 EKYDEAINASEEAIRAYNETITTYEEIVSLNPENSTASNIKSRTLIAKGNGWALKGIILG 759

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
              EY +A +A  +A+ L+      W    ++  D     +A+E +   + ++   + A+
Sbjct: 760 EQHEYNEAMQAFNEAVSLNPAGSFIWSFKGKYLNDQGKYYEAIEAIDMAISLNPESALAW 819

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + +G  L G G+H++AI      + ++P + +    +    ++ G Y EAI+ YD A+DL
Sbjct: 820 NYKGAALRGQGKHEEAILAYDEAIRLNPDDEDAWNNKGLALYSQGNYSEAIQAYDRAIDL 879



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 125/254 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A +++GKY  AI   ++ +  DP        +G A   + + + AI  + EAI+ +P
Sbjct: 304 KGEALLHQGKYDEAIQASNEAISLDPENANGWNIKGVALYNRGKSDEAIKAYDEAIRLSP 363

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  +G +  + G+  EAIQ  ++ +  +P      + +G+       ++ A++  
Sbjct: 364 EYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEHVAAWYNKGLTLNNQGKYDEAIQAF 423

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L+ E   A+   G AL S   Y +A +A+ + I+L+  + +AW      +     
Sbjct: 424 DEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEYADAWNSKGTAFNSQGR 483

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A++   + +  +  ++ A++ +G+ L  L ++++AI+       ++P + +    + 
Sbjct: 484 YNEAIKAFDEAIRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPEDADAWLKKG 543

Query: 627 SCYHAIGEYREAIK 640
             ++ +G+Y+E I+
Sbjct: 544 VAFYHLGKYKETIQ 557



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 120/256 (46%), Gaps = 7/256 (2%)

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N S  + W  +G A    G   EAIQD  +A+  +P      + +G+   K   ++ A++
Sbjct: 56  NESDPDEWNNKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAIK 115

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
             +  ++LD E  +A+   G AL   G+Y +A +A+ +AI+L   +  AW          
Sbjct: 116 AYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYSQ 175

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N ++A++   + + +D  F   +  +G  L   G+++ AI      + ++P ++     
Sbjct: 176 GNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWIN 235

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           + +  + +G+Y EAI+  + A+ L+ ++         A++ K +AL +  K +     +D
Sbjct: 236 KGAALYRLGKYDEAIRASNEAIRLDPEN-------VYAWHNKGVALNSQGKYDEAIQAYD 288

Query: 685 IDGDIDPLFKEYWCKR 700
               + P + + W ++
Sbjct: 289 EAIRLSPEYADAWNRK 304



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 90/188 (47%)

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
           F  +  D  + +G   +   +++ A++D    ++LD E    +   GLA    G+Y +A 
Sbjct: 55  FNESDPDEWNNKGYALYLQGNYDEAIQDYKEAIRLDPEFVWPWYNKGLAFEKQGKYDEAI 114

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           +A+ +AI+LD  +  AW +           ++A++   + + +   ++ A++ +G  L+ 
Sbjct: 115 KAYNEAIRLDPEYANAWHNKGYALYLQGKYDEAIKAYNEAIRLYPEYANAWNSKGYALYS 174

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
            G + +AIK  +  + +DP  +     +     + G+Y  AI  YD A+ L  + +  ++
Sbjct: 175 QGNYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWI 234

Query: 658 LQCLAFYQ 665
            +  A Y+
Sbjct: 235 NKGAALYR 242



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/299 (21%), Positives = 130/299 (43%), Gaps = 28/299 (9%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  + GKY  A+  +D++L+ +P    A   +G A     E E ++    EAI+ N
Sbjct: 623 NRGAALYSLGKYDEAVQAYDEVLRLNPEDANAWKKKGYALHSLEEHEESVKALDEAIRLN 682

Query: 446 PSAGEAWKRRG-------QARAALGESVEAIQDLSK---------ALEFEPNSADILHER 489
           P+    W  +        +   A+  S EAI+  ++         +L  E ++A  +  R
Sbjct: 683 PNDAGCWLIKSFNLLIIEKYDEAINASEEAIRAYNETITTYEEIVSLNPENSTASNIKSR 742

Query: 490 ------------GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
                       GI+  +  ++N A++  +  V L+      +++ G  L+  G+Y +A 
Sbjct: 743 TLIAKGNGWALKGIILGEQHEYNEAMQAFNEAVSLNPAGSFIWSFKGKYLNDQGKYYEAI 802

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           EA   AI L+     AW +     +     E+A+    + + ++     A++ +GL L+ 
Sbjct: 803 EAIDMAISLNPESALAWNYKGAALRGQGKHEEAILAYDEAIRLNPDDEDAWNNKGLALYS 862

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            G + +AI+     + ++   ++  Y +     A+  + +A   +    + +++S  KF
Sbjct: 863 QGNYSEAIQAYDRAIDLNSQLVQAWYNKGDALDALKNFTQAAMAHSLGRERDMNSERKF 921



 Score = 39.7 bits (91), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 6/124 (4%)

Query: 3   KRKLLDSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL 62
           K   LDS+ R ++    I   DE+++++   A A  ++       S   +++AI+  D  
Sbjct: 440 KGNALDSQSRYDEA---IQAYDEVIKLNPEYADAWNSK--GTAFNSQGRYNEAIKAFDEA 494

Query: 63  LAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
           + ++ E  D  N +      L+ ++  I+  D+A +L+P    A++ KG AF  LG+ +E
Sbjct: 495 IRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPEDADAWLKKGVAFYHLGKYKE 554

Query: 122 ALSV 125
            + V
Sbjct: 555 TIQV 558


>gi|189183138|ref|YP_001936923.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189179909|dbj|BAG39689.1| TPR repeat-containing protein 03 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 502

 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 149/323 (46%), Gaps = 7/323 (2%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C     K +  + D   S+G+     G+Y  AI  FD  +K +P  P+    +G      
Sbjct: 166 CCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIENFDLAIKYEPYNPDTYNNKGVCVDKL 225

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + AI  F  AI+  P+  EA+  +G     L +  EAI++   A++++ N       
Sbjct: 226 GQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLN 285

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G    K +    A+E+    +K +  N   Y   G  L  + +Y++A E    AI+ + 
Sbjct: 286 KGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNKGACLYELRQYQEAVENFDLAIKYNP 345

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           NF +A+        +L   ++A+EC    +  +   ++AY+ +G+ L  LGQH+ A+++ 
Sbjct: 346 NFEKAYLSKGACLYELRQYQEAIECCNLAIKYNPNDAEAYYNKGVCLFKLGQHQAAVENY 405

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
              +  +P+ ++  Y +  C   +G+ +EA+++++ A+    +  E       A+Y K +
Sbjct: 406 DLAIKYNPNYVDAYYNKGLCLSKLGQAQEAVENFNLAIKYNPNDAE-------AYYNKGL 458

Query: 669 ALYTASKINSEFCWFDIDGDIDP 691
            LY   +  +    FD+    DP
Sbjct: 459 CLYELRQYQAAIANFDLAIKYDP 481



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 129/261 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI     G+   AI  FD  +K      EA + +G +     +L+ AI +F  AI+ N
Sbjct: 81  NKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLSKGVSLGKLGQLQKAIENFDLAIKHN 140

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +   A+  +G     LG+  EAI+  + A+++EP + D  H +G+   K   ++ A+E+
Sbjct: 141 INYETAYLNKGICLYKLGQYHEAIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIEN 200

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K +  N   Y   G+ +  +G++++A +    AI+   N  EA+ +       L 
Sbjct: 201 FDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLYQLE 260

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+E     +     +  AY  +G  L  L QH++AI++    +  +  N +  Y +
Sbjct: 261 QYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTYYNK 320

Query: 626 ASCYHAIGEYREAIKDYDAAL 646
            +C + + +Y+EA++++D A+
Sbjct: 321 GACLYELRQYQEAVENFDLAI 341



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 169/384 (44%), Gaps = 29/384 (7%)

Query: 302 NGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNE 361
           N    V  KL  D A L + +        S +  NK  ++ E+   L+ K++       E
Sbjct: 25  NNNQPVQQKLIHDKAILAEKHFYV---GISFLKLNKYQEAIENFD-LAIKYN---PNCAE 77

Query: 362 AKRNKKFCVTRIS-------------KSKSISVDFRLSRGIAQVNEGKYASAISIFDQIL 408
           A  NK  C+ ++              K KS   +  LS+G++    G+   AI  FD  +
Sbjct: 78  AYYNKGICLDKLGQLQKAIENFDLTIKYKSNCEEAYLSKGVSLGKLGQLQKAIENFDLAI 137

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           K +  Y  A + +G       +   AI     AI+  P   +A+  +G     LG+  EA
Sbjct: 138 KHNINYETAYLNKGICLYKLGQYHEAIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEA 197

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I++   A+++EP + D  + +G+   K      A++  +  +K     + AY   G+ L 
Sbjct: 198 IENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLY 257

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            + +YK+A E    AI+   N++ A+ +       L   ++A+E     +  +      Y
Sbjct: 258 QLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPDTY 317

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDYDAALD 647
           + +G  L+ L Q+++A+++    +  +P N E  YL + +C + + +Y+EAI+  + A+ 
Sbjct: 318 YNKGACLYELRQYQEAVENFDLAIKYNP-NFEKAYLSKGACLYELRQYQEAIECCNLAIK 376

Query: 648 LELDSMEKFVLQCLAFYQKEIALY 671
              +  E       A+Y K + L+
Sbjct: 377 YNPNDAE-------AYYNKGVCLF 393



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 148/326 (45%), Gaps = 7/326 (2%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           ++   K+I  +     GI+ +   KY  AI  FD  +K +P   EA   +G       +L
Sbjct: 33  KLIHDKAILAEKHFYVGISFLKLNKYQEAIENFDLAIKYNPNCAEAYYNKGICLDKLGQL 92

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AI +F   I+   +  EA+  +G +   LG+  +AI++   A++   N       +GI
Sbjct: 93  QKAIENFDLTIKYKSNCEEAYLSKGVSLGKLGQLQKAIENFDLAIKHNINYETAYLNKGI 152

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             +K   ++ A+E  +  +K +  N  AY   G+ L  +G+Y +A E    AI+ +    
Sbjct: 153 CLYKLGQYHEAIECCNLAIKYEPYNPDAYHSKGMCLDKLGQYHEAIENFDLAIKYEPYNP 212

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           + + +       L   ++A++     +       +AY  +G+ L+ L Q+K+AI++    
Sbjct: 213 DTYNNKGVCVDKLGQHQEAIKIFNLAIKYKPNCEEAYLNKGMCLYQLEQYKEAIENFDLA 272

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           +    + +     + +C   + +++EAI+++D A+  EL + +        +Y K   LY
Sbjct: 273 IKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYELCNPD-------TYYNKGACLY 325

Query: 672 TASKINSEFCWFDIDGDIDPLFKEYW 697
              +       FD+    +P F++ +
Sbjct: 326 ELRQYQEAVENFDLAIKYNPNFEKAY 351



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/326 (22%), Positives = 141/326 (43%), Gaps = 52/326 (15%)

Query: 308 HDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRS--KLSFKWDMLKETSNEAKRN 365
           H+ + +   ++     N ++Y+   +  +K     E+     L+ K+   K    EA  N
Sbjct: 195 HEAIENFDLAIKYEPYNPDTYNNKGVCVDKLGQHQEAIKIFNLAIKY---KPNCEEAYLN 251

Query: 366 KKFCVTRISKSKS------ISVDFRLSRGIAQVNEG-------KYASAISIFDQILKEDP 412
           K  C+ ++ + K       +++ ++ +   A +N+G       ++  AI  FD  +K + 
Sbjct: 252 KGMCLYQLEQYKEAIENFDLAIKYKSNYVGAYLNKGACLSKLEQHQEAIENFDLAIKYEL 311

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
             P+    +G      R+ + A+ +F  AI+ NP+  +A+  +G     L +  EAI+  
Sbjct: 312 CNPDTYYNKGACLYELRQYQEAVENFDLAIKYNPNFEKAYLSKGACLYELRQYQEAIECC 371

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           + A+++ PN A+  + +G+  FK     AAVE+    +K +     AY   GL LS +G+
Sbjct: 372 NLAIKYNPNDAEAYYNKGVCLFKLGQHQAAVENYDLAIKYNPNYVDAYYNKGLCLSKLGQ 431

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
            ++A E    AI+ + N  E                                  AY+ +G
Sbjct: 432 AQEAVENFNLAIKYNPNDAE----------------------------------AYYNKG 457

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSN 618
           L L+ L Q++ AI +    +  DP+N
Sbjct: 458 LCLYELRQYQAAIANFDLAIKYDPNN 483


>gi|75907774|ref|YP_322070.1| TPR repeat-containing serine/threonine protein kinase [Anabaena
           variabilis ATCC 29413]
 gi|75701499|gb|ABA21175.1| serine/threonine protein kinase with TPR repeats [Anabaena
           variabilis ATCC 29413]
          Length = 707

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 151/305 (49%), Gaps = 14/305 (4%)

Query: 380 SVDFRLSRGIAQVNEGK-------YASAISIFDQILKEDPMYPEALIGRG-TARAFQREL 431
           +VD R     A   +GK       Y  A++ +D+ ++  P Y EA  GRG + ++ QR  
Sbjct: 355 AVDIRPDYAPAWYGKGKTLFRLKQYQDALTAYDKAIQIQPDYVEAWSGRGFSLQSLQRYA 414

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           EA I+ F +A+Q N +  E W  RG+A + L +   AI+   KA+EF+ ++ +  + +G+
Sbjct: 415 EA-IASFDKALQLNENYPEVWNARGEAFSNLKQYDRAIKSYDKAIEFKSDAYESFYNKGL 473

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                K++N A+   +  +++  + + A+  LG +L ++  Y+ A +A+ KA+Q   ++ 
Sbjct: 474 ALQSLKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYDKAVQYKTDYA 533

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            AW         L    +A+E   QV+  +    +A++ +G   H   ++ +AI+     
Sbjct: 534 IAWLSKGNVLIILRRYPEAIESFNQVIKFNPNSYQAWYGKGWSQHQNQRYAEAIESYKKA 593

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQK 666
             I PSN +  Y   +  + + +Y+EAI  Y+ A+  +   +E +      L  L  YQ 
Sbjct: 594 ATIKPSNYQVWYSLGNSQYILQQYQEAIASYNKAVRYQPKHIESWYSRGNALFSLKQYQD 653

Query: 667 EIALY 671
            IA Y
Sbjct: 654 AIASY 658



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 135/284 (47%), Gaps = 11/284 (3%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+S + + +   P Y  A  G+G      ++ + A++ + +AIQ  P   EAW  R
Sbjct: 344 RYKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAYDKAIQIQPDYVEAWSGR 403

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G +  +L    EAI    KAL+   N  ++ + RG      K ++ A++     ++   +
Sbjct: 404 GFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDRAIKSYDKAIEFKSD 463

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              ++   GLAL S+ EY +A  A+ KAI++  ++  AW +L     +L   E A +   
Sbjct: 464 AYESFYNKGLALQSLKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYD 523

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + +     ++ A+  +G +L  L ++ +AI+  +  +  +P++ +  Y +    H    Y
Sbjct: 524 KAVQYKTDYAIAWLSKGNVLIILRRYPEAIESFNQVIKFNPNSYQAWYGKGWSQHQNQRY 583

Query: 636 REAIKDYDAALDLELDSME--------KFVLQCLAFYQKEIALY 671
            EAI+ Y  A  ++  + +        +++LQ    YQ+ IA Y
Sbjct: 584 AEAIESYKKAATIKPSNYQVWYSLGNSQYILQQ---YQEAIASY 624



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 80/171 (46%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N+A  L ++G   F+ + +  A+      V +  +   A+   G  L  + +Y+ A  A+
Sbjct: 327 NNATELAKQGNTFFELQRYKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAY 386

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            KAIQ+  +++EAW       Q L    +A+    + L +++ + + ++ RG     L Q
Sbjct: 387 DKAIQIQPDYVEAWSGRGFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQ 446

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           + +AIK     +       E  Y +     ++ EY EAI  Y+ A++++ D
Sbjct: 447 YDRAIKSYDKAIEFKSDAYESFYNKGLALQSLKEYNEAINAYNKAIEIKSD 497



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/198 (20%), Positives = 90/198 (45%)

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           ++G     L    +A+    KA++  P+ A   + +G   F+ K +  A+      +++ 
Sbjct: 334 KQGNTFFELQRYKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAYDKAIQIQ 393

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +   A++  G +L S+  Y +A  +  KA+QL+ N+ E W    + + +L   ++A++ 
Sbjct: 394 PDYVEAWSGRGFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDRAIKS 453

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             + +       ++++ +GL L  L ++ +AI   +  + I        Y   +    + 
Sbjct: 454 YDKAIEFKSDAYESFYNKGLALQSLKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLN 513

Query: 634 EYREAIKDYDAALDLELD 651
            Y +A K YD A+  + D
Sbjct: 514 RYEDAFKAYDKAVQYKTD 531



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 98/218 (44%), Gaps = 11/218 (5%)

Query: 339 SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEG 395
           SD+ ES          LKE  NEA       +   +K+  I  D+     + G + VN  
Sbjct: 462 SDAYESFYNKGLALQSLKEY-NEA-------INAYNKAIEIKSDYERAWYNLGNSLVNLN 513

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A   +D+ ++    Y  A + +G      R    AI  F + I+ NP++ +AW  +
Sbjct: 514 RYEDAFKAYDKAVQYKTDYAIAWLSKGNVLIILRRYPEAIESFNQVIKFNPNSYQAWYGK 573

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G ++       EAI+   KA   +P++  + +  G   +  + +  A+   +  V+   +
Sbjct: 574 GWSQHQNQRYAEAIESYKKAATIKPSNYQVWYSLGNSQYILQQYQEAIASYNKAVRYQPK 633

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           +  ++   G AL S+ +Y+ A  ++ +AI+   ++ +A
Sbjct: 634 HIESWYSRGNALFSLKQYQDAIASYEQAIKHKPDYSQA 671



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 8/174 (4%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G     +  YK A  A+ KA+ +  ++  AW    +    L   + AL    + + I   
Sbjct: 336 GNTFFELQRYKDALSAYKKAVDIRPDYAPAWYGKGKTLFRLKQYQDALTAYDKAIQIQPD 395

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           + +A+  RG  L  L ++ +AI      L ++ +  E    R   +  + +Y  AIK YD
Sbjct: 396 YVEAWSGRGFSLQSLQRYAEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDRAIKSYD 455

Query: 644 AALDLELDSMEKF-----VLQCLAFYQKEIALYT-ASKINSEF--CWFDIDGDI 689
            A++ + D+ E F      LQ L  Y + I  Y  A +I S++   W+++   +
Sbjct: 456 KAIEFKSDAYESFYNKGLALQSLKEYNEAINAYNKAIEIKSDYERAWYNLGNSL 509



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/215 (20%), Positives = 96/215 (44%), Gaps = 14/215 (6%)

Query: 372 RISKSKSISVDFR-------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
           R  KS   +++F+        ++G+A  +  +Y  AI+ +++ ++    Y  A    G +
Sbjct: 449 RAIKSYDKAIEFKSDAYESFYNKGLALQSLKEYNEAINAYNKAIEIKSDYERAWYNLGNS 508

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
                  E A   + +A+Q       AW  +G     L    EAI+  ++ ++F PNS  
Sbjct: 509 LVNLNRYEDAFKAYDKAVQYKTDYAIAWLSKGNVLIILRRYPEAIESFNQVIKFNPNSYQ 568

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
             + +G    + + +  A+E       +   N   +  LG +   + +Y++A  ++ KA+
Sbjct: 569 AWYGKGWSQHQNQRYAEAIESYKKAATIKPSNYQVWYSLGNSQYILQQYQEAIASYNKAV 628

Query: 545 QLDRNFLEAW---GH----LTQFYQDLANSEKALE 572
           +     +E+W   G+    L Q+   +A+ E+A++
Sbjct: 629 RYQPKHIESWYSRGNALFSLKQYQDAIASYEQAIK 663



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 64/149 (42%), Gaps = 18/149 (12%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +L  + KAI+I      Q   ++    R F    L+ +   I   DKALQL+    + + 
Sbjct: 382 ALTAYDKAIQI------QPDYVEAWSGRGFSLQSLQRYAEAIASFDKALQLNENYPEVWN 435

Query: 108 LKGCAFSALGRKEEALSVWEK-------GYEHALHQSADLKQFLELEELLTAAKQDRSVT 160
            +G AFS L + + A+  ++K        YE   ++   L+   E  E + A  +   + 
Sbjct: 436 ARGEAFSNLKQYDRAIKSYDKAIEFKSDAYESFYNKGLALQSLKEYNEAINAYNKAIEIK 495

Query: 161 CEYD-----VSNSMSSLTVSESGLNANDK 184
            +Y+     + NS+ +L   E    A DK
Sbjct: 496 SDYERAWYNLGNSLVNLNRYEDAFKAYDK 524


>gi|440752492|ref|ZP_20931695.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
 gi|440176985|gb|ELP56258.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
          Length = 801

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 117/253 (46%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI+ +D+ L+  P Y EA   RG A       E AI+ +  A++  P   EAW  R
Sbjct: 487 QYQEAIASYDKALEIKPDYHEAWNNRGNALDDLGRFEQAIASYDRALEMKPDYHEAWNNR 546

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   LG   EAI    KALEF+P+  +  + RG   F    F  A+      ++   +
Sbjct: 547 GNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFKPD 606

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              A+   G AL ++G +++   ++ +A+++  +  EAW +      +L   E+A+    
Sbjct: 607 YHQAWYNRGNALGNLGRFEEEIASYDRALEIKPDKHEAWNNRGVALGNLGRLEEAIASYD 666

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + L       +A++ RG  L  LG+  +AI      L   P   E  Y R +    +G +
Sbjct: 667 RALEFKPDDHEAWYNRGNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRF 726

Query: 636 REAIKDYDAALDL 648
            EAI  YD AL+ 
Sbjct: 727 EEAIASYDRALEF 739



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 139/296 (46%), Gaps = 21/296 (7%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+  F++++   P + +    +GT   +  + + AI+ + +A++  P   EAW  R
Sbjct: 453 RYQDALKGFNRLVSLLPQWEDGWFYQGTTFYYLEQYQEAIASYDKALEIKPDYHEAWNNR 512

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   LG   +AI    +ALE +P+  +  + RG   F       A+      ++   +
Sbjct: 513 GNALDDLGRFEQAIASYDRALEMKPDYHEAWNNRGNALFNLGRLAEAIASYDKALEFKPD 572

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANSE 568
              A+   G AL ++G +++A  ++ +A++   ++ +AW       G+L +F +++A+ +
Sbjct: 573 YHEAWYNRGNALFNLGRFEEAIASYDRALEFKPDYHQAWYNRGNALGNLGRFEEEIASYD 632

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +ALE       I     +A++ RG+ L  LG+ ++AI      L   P + E  Y R + 
Sbjct: 633 RALE-------IKPDKHEAWNNRGVALGNLGRLEEAIASYDRALEFKPDDHEAWYNRGNA 685

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
              +G   EAI  YD AL+ + D  E       A+Y +  AL+   +       +D
Sbjct: 686 LFNLGRLAEAIASYDKALEFKPDYHE-------AWYNRGNALFNLGRFEEAIASYD 734



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 124/265 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  + G++  AI+ +D+ L+  P Y EA   RG A      L  AI+ + +A++  
Sbjct: 511 NRGNALDDLGRFEQAIASYDRALEMKPDYHEAWNNRGNALFNLGRLAEAIASYDKALEFK 570

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    +ALEF+P+     + RG        F   +  
Sbjct: 571 PDYHEAWYNRGNALFNLGRFEEAIASYDRALEFKPDYHQAWYNRGNALGNLGRFEEEIAS 630

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +   A+   G+AL ++G  ++A  ++ +A++   +  EAW +      +L 
Sbjct: 631 YDRALEIKPDKHEAWNNRGVALGNLGRLEEAIASYDRALEFKPDDHEAWYNRGNALFNLG 690

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +A+    + L     + +A++ RG  L  LG+ ++AI      L  + +     Y +
Sbjct: 691 RLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFNSNYANAYYNK 750

Query: 626 ASCYHAIGEYREAIKDYDAALDLEL 650
           A CY        AI++   A++L++
Sbjct: 751 ACCYGLQNNVELAIENLQRAINLDV 775



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 98/200 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G++  AI+ +D+ L+  P Y +A   RG A       E  I+ +  A++  
Sbjct: 579 NRGNALFNLGRFEEAIASYDRALEFKPDYHQAWYNRGNALGNLGRFEEEIASYDRALEIK 638

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    +ALEF+P+  +  + RG   F       A+  
Sbjct: 639 PDKHEAWNNRGVALGNLGRLEEAIASYDRALEFKPDDHEAWYNRGNALFNLGRLAEAIAS 698

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++   +   A+   G AL ++G +++A  ++ +A++ + N+  A+ +    Y    
Sbjct: 699 YDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFNSNYANAYYNKACCYGLQN 758

Query: 566 NSEKALECLQQVLYIDKRFS 585
           N E A+E LQ+ + +D ++ 
Sbjct: 759 NVELAIENLQRAINLDVKYQ 778



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G+ A AI+ +D+ L+  P Y EA   RG A       E AI+ +  A++ N
Sbjct: 681 NRGNALFNLGRLAEAIASYDKALEFKPDYHEAWYNRGNALFNLGRFEEAIASYDRALEFN 740

Query: 446 PSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADI 485
            +   A+  +      L  +VE AI++L +A+  +    D+
Sbjct: 741 SNYANAYYNKACC-YGLQNNVELAIENLQRAINLDVKYQDM 780


>gi|428313062|ref|YP_007124039.1| hypothetical protein Mic7113_4972 [Microcoleus sp. PCC 7113]
 gi|428254674|gb|AFZ20633.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
          Length = 528

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 135/277 (48%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G   +N  +Y  AIS ++Q ++  P +PEA    G A A  +  E AI+ + +AIQ  P
Sbjct: 170 QGNELLNSQRYEEAISAYNQAVQIQPNFPEAWNNGGLALANLQRYEEAIAAYDQAIQIQP 229

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   AW  RG A   L    EA+    +A++ +P+  ++    G + F  + +  ++   
Sbjct: 230 NYHLAWSNRGDALVNLQRYEEALASYERAIQLKPDIPNVWFLHGAMLFDLQRYQESIASF 289

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +++  E   A+ + G A+ ++  Y++A  ++ +AI+   + LEAW +      +L  
Sbjct: 290 KRAIQIQPEFNEAWYFQGNAMLNLQHYEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQR 349

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           +E A     + + +   FS A+  RGL+L  L ++++++      + + P   E    R 
Sbjct: 350 NEDAFVSFDRAIQLKSDFSDAWFNRGLVLFNLKRYEESVASFDRVIQLKPDIAEVWLFRG 409

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           S    +  Y EA+   D A+ L+ + +E + ++ + F
Sbjct: 410 SALGELQRYAEALVCCDRAIQLKPELLEAWSVRGVVF 446



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 116/264 (43%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A VN  +Y  A++ +++ ++  P  P      G      +  + +I+ F  AIQ  
Sbjct: 237 NRGDALVNLQRYEEALASYERAIQLKPDIPNVWFLHGAMLFDLQRYQESIASFKRAIQIQ 296

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  +G A   L    EAI   ++A++ +P+  +  + RG+     +    A   
Sbjct: 297 PEFNEAWYFQGNAMLNLQHYEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQRNEDAFVS 356

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L  +   A+   GL L ++  Y+++  +  + IQL  +  E W        +L 
Sbjct: 357 FDRAIQLKSDFSDAWFNRGLVLFNLKRYEESVASFDRVIQLKPDIAEVWLFRGSALGELQ 416

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +AL C  + + +     +A+ +RG++   L QH++AI      +   P N    Y +
Sbjct: 417 RYAEALVCCDRAIQLKPELLEAWSVRGVVFAKLQQHEEAIAACDQVIQKKPDNPIGWYGK 476

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
           A CY   G     IK+     +L+
Sbjct: 477 ACCYALQGNVELLIKNLQWTFELD 500



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 85/198 (42%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A +N   Y  AI+ +++ +K  P   EA   RG A    +  E A   F  AIQ   
Sbjct: 306 QGNAMLNLQHYEEAINSYNRAIKSKPDLLEAWYNRGVALMNLQRNEDAFVSFDRAIQLKS 365

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG     L    E++    + ++ +P+ A++   RG    + + +  A+   
Sbjct: 366 DFSDAWFNRGLVLFNLKRYEESVASFDRVIQLKPDIAEVWLFRGSALGELQRYAEALVCC 425

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L  E   A++  G+  + + ++++A  A  + IQ   +    W      Y    N
Sbjct: 426 DRAIQLKPELLEAWSVRGVVFAKLQQHEEAIAACDQVIQKKPDNPIGWYGKACCYALQGN 485

Query: 567 SEKALECLQQVLYIDKRF 584
            E  ++ LQ    +D R+
Sbjct: 486 VELLIKNLQWTFELDSRY 503



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 3/139 (2%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            R  KSK   ++   +RG+A +N  +   A   FD+ ++    + +A   RG      + 
Sbjct: 324 NRAIKSKPDLLEAWYNRGVALMNLQRNEDAFVSFDRAIQLKSDFSDAWFNRGLVLFNLKR 383

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            E +++ F   IQ  P   E W  RG A   L    EA+    +A++ +P   +    RG
Sbjct: 384 YEESVASFDRVIQLKPDIAEVWLFRGSALGELQRYAEALVCCDRAIQLKPELLEAWSVRG 443

Query: 491 IVNFKFKDFNAAVEDLSAC 509
           +V   F       E ++AC
Sbjct: 444 VV---FAKLQQHEEAIAAC 459



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L +L+ + +++   D ++    +I ++   R     +L+ +   +  CD+A+QL P LL+
Sbjct: 378 LFNLKRYEESVASFDRVIQLKPDIAEVWLFRGSALGELQRYAEALVCCDRAIQLKPELLE 437

Query: 105 AYILKGCAFSALGRKEEALS 124
           A+ ++G  F+ L + EEA++
Sbjct: 438 AWSVRGVVFAKLQQHEEAIA 457


>gi|124024558|ref|YP_001018865.1| hypothetical protein P9303_28701 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964844|gb|ABM79600.1| Hypothetical protein P9303_28701 [Prochlorococcus marinus str. MIT
           9303]
          Length = 582

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 133/261 (50%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI+ + + L+ +P        RG A+    + + AISD+T+AI+ +P    A+  RG
Sbjct: 310 YQGAIADYSKALEINPEDANTFNNRGNAKHGLGDYQGAISDYTKAIELDPQHALAYDNRG 369

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            ++  L +   AI D +KA+E +P  A   + RG      KD+  A+ D +  ++LD ++
Sbjct: 370 YSKHDLKDYQAAIADYNKAIEIDPQYAIAYNNRGTAKDDLKDYQGAIADYNKAIELDPQH 429

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A++  G+   ++G+ + A   + KAI+++     A+ +      +L + ++A+    +
Sbjct: 430 AFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGSYQEAIADCNK 489

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            + ID +++ AY+ RG + +  G  + A+KD +  L I P++   L  R    HA+G+ R
Sbjct: 490 AIQIDPQYAGAYNSRGWIKYLQGDFQGALKDANKALAIAPNDGATLDTRGLAKHALGQDR 549

Query: 637 EAIKDYDAALDLELDSMEKFV 657
            A KD   A  L      +++
Sbjct: 550 SACKDLKRASSLGYQGTSQYL 570



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 98/203 (48%)

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S+G  +  R  A+  L +   AI D SKALE  P  A+  + RG       D+  A+ D 
Sbjct: 292 SSGGGYFLRAYAKKKLKDYQGAIADYSKALEINPEDANTFNNRGNAKHGLGDYQGAISDY 351

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++LD ++  AY   G +   + +Y+ A   + KAI++D  +  A+ +      DL +
Sbjct: 352 TKAIELDPQHALAYDNRGYSKHDLKDYQAAIADYNKAIEIDPQYAIAYNNRGTAKDDLKD 411

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + A+    + + +D + + A+  RG+    LG  + AI D +  + I+P N      R 
Sbjct: 412 YQGAIADYNKAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRG 471

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
                +G Y+EAI D + A+ ++
Sbjct: 472 LAKSNLGSYQEAIADCNKAIQID 494



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 5/150 (3%)

Query: 376 SKSISVD----FRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +K+I +D    F  S RGI + N G    AI+ +++ ++ +P    A   RG A++    
Sbjct: 420 NKAIELDPQHAFAFSNRGITKRNLGDTQGAIADYNKAIEINPQNAIAYNNRGLAKSNLGS 479

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+D  +AIQ +P    A+  RG  +   G+   A++D +KAL   PN    L  RG
Sbjct: 480 YQEAIADCNKAIQIDPQYAGAYNSRGWIKYLQGDFQGALKDANKALAIAPNDGATLDTRG 539

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
           +         +A +DL     L  +  S Y
Sbjct: 540 LAKHALGQDRSACKDLKRASSLGYQGTSQY 569


>gi|440680703|ref|YP_007155498.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428677822|gb|AFZ56588.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 233

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 109/219 (49%), Gaps = 7/219 (3%)

Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
           IFD I    P +      RG  +  Q +   AI DF++AI +NP+   ++  RG A AAL
Sbjct: 4   IFDMIFGTSPSWR-----RGDQKLKQGDYTGAIKDFSQAIATNPNDSFSYCHRGSAYAAL 58

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G+  +AI+D ++A+   P+     + RGI      D    +ED    + +D      + Y
Sbjct: 59  GDHKKAIEDYTQAIRLSPSEPGFYNNRGISYCAVGDIERGIEDYKRVIHIDSSIPQGHRY 118

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
           LG+A   I +Y  A     +AIQ+D  +  A+ +    Y  L    +AL+     L I  
Sbjct: 119 LGIAYIKINKYDYAVRCLTRAIQIDSKYPSAYAYRGLAYTGLKKYAEALKDFDHALEIYP 178

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDL--SSGLGIDPSNI 619
           ++S+AY  RG+L   +G+   AI+DL  ++GL  + +N+
Sbjct: 179 QYSEAYKFRGMLYIEIGETSSAIEDLKKAAGLFFNQNNM 217



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 54/107 (50%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA +   KY  A+    + ++ D  YP A   RG A    ++   A+ DF  A++  P 
Sbjct: 120 GIAYIKINKYDYAVRCLTRAIQIDSKYPSAYAYRGLAYTGLKKYAEALKDFDHALEIYPQ 179

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
             EA+K RG     +GE+  AI+DL KA     N  ++L ++ +++ 
Sbjct: 180 YSEAYKFRGMLYIEIGETSSAIEDLKKAAGLFFNQNNMLEQQNVLSL 226



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           F  +RGI+    G     I  + +++  D   P+     G A     + + A+   T AI
Sbjct: 81  FYNNRGISYCAVGDIERGIEDYKRVIHIDSSIPQGHRYLGIAYIKINKYDYAVRCLTRAI 140

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           Q +     A+  RG A   L +  EA++D   ALE  P  ++    RG++  +  + ++A
Sbjct: 141 QIDSKYPSAYAYRGLAYTGLKKYAEALKDFDHALEIYPQYSEAYKFRGMLYIEIGETSSA 200

Query: 503 VEDLSACVKL 512
           +EDL     L
Sbjct: 201 IEDLKKAAGL 210



 Score = 47.0 bits (110), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 68/163 (41%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G +  AI  + Q ++  P  P     RG +     ++E  I D+   I  + 
Sbjct: 51  RGSAYAALGDHKKAIEDYTQAIRLSPSEPGFYNNRGISYCAVGDIERGIEDYKRVIHIDS 110

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S  +  +  G A   + +   A++ L++A++ +         RG+     K +  A++D 
Sbjct: 111 SIPQGHRYLGIAYIKINKYDYAVRCLTRAIQIDSKYPSAYAYRGLAYTGLKKYAEALKDF 170

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
              +++  +   AY + G+    IGE   A E   KA  L  N
Sbjct: 171 DHALEIYPQYSEAYKFRGMLYIEIGETSSAIEDLKKAAGLFFN 213


>gi|86606961|ref|YP_475724.1| TPR repeat- and protein kinase domain-containing protein
           [Synechococcus sp. JA-3-3Ab]
 gi|86555503|gb|ABD00461.1| protein kinase domain/TPR repeat protein [Synechococcus sp.
           JA-3-3Ab]
          Length = 952

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 145/329 (44%), Gaps = 46/329 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RGIA+   G Y  A++ +   L+ DP +  A   RG A     + + AI D++ A++ 
Sbjct: 370 FNRGIARYRLGNYEGAVADYTHALRLDPHWALAYYSRGNAYRQLDQPQQAIEDYSRALEL 429

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A+  RG  R  LG++  A+ D S+ L  +P   +    RG+   +  DF  A+E
Sbjct: 430 NPEEVRAYFNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQLLDFQGAIE 489

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA-----EEAHLKAIQ-------------- 545
           D +  ++LD  +  A    GLA  ++G+ + A     +   L+A Q              
Sbjct: 490 DYTQALQLDPGHPKACYRRGLARQALGDLQGAITDFSQAIALRATQGEEPSGAVAAAQAE 549

Query: 546 ---------LDRNFLEAWGH-------------LTQFY-----QDLANSEKALECLQQVL 578
                    L  N LEA                L  FY     Q L +   AL    + L
Sbjct: 550 LYLQRAVAYLSNNALEAALADCEQALRLNPALALAHFYRGLARQGLGDPAGALADFNRAL 609

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            +D R +KAY  RG+    LG  + A+ DL+  + +D S++     R   +  +G+   A
Sbjct: 610 ELDPRLAKAYLKRGIAHLELGHLEAALADLNQAIALDASDVGARSSRGQVHRLLGDPLAA 669

Query: 639 IKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           ++DY AAL+ +  + + +  +   ++++E
Sbjct: 670 LQDYTAALERDPRNPQLYFDRGQIYFEQE 698



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 123/241 (51%)

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           L  D +    L+ RG  +A Q +L+ AI+D+T AIQ +P  G A  +RG  R   G+   
Sbjct: 291 LSVDQLLAMRLVTRGQEKARQGDLQGAIADYTLAIQLDPQNGRAHSQRGSVRYKTGDWAG 350

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           A++D ++A++     A     RGI  ++  ++  AV D +  ++LD     AY   G A 
Sbjct: 351 AVEDFTRAIQLGGGDARTYFNRGIARYRLGNYEGAVADYTHALRLDPHWALAYYSRGNAY 410

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             + + ++A E + +A++L+   + A+ +       L +++ A+    +VL  D + ++A
Sbjct: 411 RQLDQPQQAIEDYSRALELNPEEVRAYFNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEA 470

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y  RG+    L   + AI+D +  L +DP + +  Y R     A+G+ + AI D+  A+ 
Sbjct: 471 YFNRGVARAQLLDFQGAIEDYTQALQLDPGHPKACYRRGLARQALGDLQGAITDFSQAIA 530

Query: 648 L 648
           L
Sbjct: 531 L 531



 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 14/284 (4%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+   G  A A++ F++ L+ DP   +A + RG A      LEAA++D  +AI  + 
Sbjct: 588 RGLARQGLGDPAGALADFNRALELDPRLAKAYLKRGIAHLELGHLEAALADLNQAIALDA 647

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S   A   RGQ    LG+ + A+QD + ALE +P +  +  +RG + F+ +D+ AA ED 
Sbjct: 648 SDVGARSSRGQVHRLLGDPLAALQDYTAALERDPRNPQLYFDRGQIYFEQEDWAAACEDF 707

Query: 507 SACVKLDKENKSA---------YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           S  ++   +             + Y G+A   + +++ A       IQ      + +   
Sbjct: 708 SQALQWAGQPGGPHGLDLMARIHLYRGMARQRLEDWQGALADFTALIQEQPQASQGFALR 767

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRF-----SKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
              +  L + E AL  L + +  ++ +     + AY  RG L     + ++AI D +  L
Sbjct: 768 AAVHLVLGDEEAALADLDRAIGCNRDWGLADAALAYRQRGDLHRQANRLQQAIADYTQVL 827

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            ++P     L  RA  +   GE   A+ DY   L LE D   + 
Sbjct: 828 ALNPQERHALLWRALLWDQAGEIERALADYTQLLQLEPDPQTRL 871



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 135/328 (41%), Gaps = 19/328 (5%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG  +  +G    AI+ +   ++ DP    A   RG+ R    +   A+ DFT AIQ 
Sbjct: 302 VTRGQEKARQGDLQGAIADYTLAIQLDPQNGRAHSQRGSVRYKTGDWAGAVEDFTRAIQL 361

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
                  +  RG AR  LG    A+ D + AL  +P+ A   + RG    +      A+E
Sbjct: 362 GGGDARTYFNRGIARYRLGNYEGAVADYTHALRLDPHWALAYYSRGNAYRQLDQPQQAIE 421

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D S  ++L+ E   AY   G+    +G+ + A     + ++ D    EA+ +       L
Sbjct: 422 DYSRALELNPEEVRAYFNRGVVRGQLGDAQGAVADFSEVLRRDPQDTEAYFNRGVARAQL 481

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL------GIDPSN 618
            + + A+E   Q L +D    KA + RGL    LG  + AI D S  +      G +PS 
Sbjct: 482 LDFQGAIEDYTQALQLDPGHPKACYRRGLARQALGDLQGAITDFSQAIALRATQGEEPSG 541

Query: 619 IEC-----LYL-RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYT 672
                   LYL RA  Y +      A+ D + AL L            LA + + +A   
Sbjct: 542 AVAAAQAELYLQRAVAYLSNNALEAALADCEQALRLN-------PALALAHFYRGLARQG 594

Query: 673 ASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                     F+   ++DP   + + KR
Sbjct: 595 LGDPAGALADFNRALELDPRLAKAYLKR 622



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 128/317 (40%), Gaps = 55/317 (17%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI-- 442
            +RG+A+     +  AI  + Q L+ DP +P+A   RG AR    +L+ AI+DF++AI  
Sbjct: 472 FNRGVARAQLLDFQGAIEDYTQALQLDPGHPKACYRRGLARQALGDLQGAITDFSQAIAL 531

Query: 443 --------------------------------------------QSNPSAGEAWKRRGQA 458
                                                       + NP+   A   RG A
Sbjct: 532 RATQGEEPSGAVAAAQAELYLQRAVAYLSNNALEAALADCEQALRLNPALALAHFYRGLA 591

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
           R  LG+   A+ D ++ALE +P  A    +RGI + +     AA+ DL+  + LD  +  
Sbjct: 592 RQGLGDPAGALADFNRALELDPRLAKAYLKRGIAHLELGHLEAALADLNQAIALDASDVG 651

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
           A +  G     +G+   A + +  A++ D    + +    Q Y +  +   A E   Q L
Sbjct: 652 ARSSRGQVHRLLGDPLAALQDYTAALERDPRNPQLYFDRGQIYFEQEDWAAACEDFSQAL 711

Query: 579 YIDKR---------FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
               +          ++ +  RG+    L   + A+ D ++ +   P   +   LRA+ +
Sbjct: 712 QWAGQPGGPHGLDLMARIHLYRGMARQRLEDWQGALADFTALIQEQPQASQGFALRAAVH 771

Query: 630 HAIGEYREAIKDYDAAL 646
             +G+   A+ D D A+
Sbjct: 772 LVLGDEEAALADLDRAI 788



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 5/89 (5%)

Query: 395 GKYASAISIFDQILKEDPMYPE----ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           G+   A++ + Q+L+ +P  P+    AL  RG A A Q +  AAI D+T+ ++ +PS  +
Sbjct: 848 GEIERALADYTQLLQLEPD-PQTRLWALNNRGWAYAQQGDFAAAIRDYTQVLERDPSHIK 906

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFE 479
           A   R  ARAA+G+   A QD   AL+ +
Sbjct: 907 AHCNRALARAAVGDWQGACQDFQTALQLQ 935



 Score = 42.4 bits (98), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 36/68 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A   +G +A+AI  + Q+L+ DP + +A   R  ARA   + + A  DF  A+Q  
Sbjct: 876 NRGWAYAQQGDFAAAIRDYTQVLERDPSHIKAHCNRALARAAVGDWQGACQDFQTALQLQ 935

Query: 446 PSAGEAWK 453
              G  W+
Sbjct: 936 GYEGRLWE 943


>gi|425464999|ref|ZP_18844309.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9809]
 gi|389832848|emb|CCI23201.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9809]
          Length = 437

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 165/370 (44%), Gaps = 18/370 (4%)

Query: 366 KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           KK+ +     +K+I++D R +     RG+  + + K   A+S F+Q L  +P   EA  G
Sbjct: 59  KKYDLALAEFTKAINIDPRYAEAYSNRGLLYLQQEKPDLALSDFNQALNINPRLAEAYNG 118

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG     Q + + A+SD+ +A+  NP    A+  RG       +   A+ + +KAL   P
Sbjct: 119 RGFLYGVQGKPDLALSDYNQALNINPRLALAYSNRGNLYRQQEKPDLALAEFNKALNINP 178

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
             A+  + RG++ ++    + A+ D +  + ++     AY   G      G+   A   +
Sbjct: 179 RLAEAYYNRGLLYYEQGKPDLALSDFNQAININPRFAEAYNNRGFLYRQQGKPDLALSDY 238

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI ++  +  A+ +    Y +    + AL    Q L I+ R   AY  RGLL    G+
Sbjct: 239 NQAININPRYATAYNNRGFLYAEQGKPDLALSDFNQALNINPRLDLAYSNRGLLYDIQGK 298

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
              A+ D +  L I+P        R + Y+  G+   A+ DY+ AL++            
Sbjct: 299 PDLALSDYNQALNINPRFALAYNNRGTLYYKQGKSDLALSDYNQALNIN-------PRLA 351

Query: 661 LAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR--LHPKNVCEKVYRQPPLRD 718
           LA+Y +    Y   K +     F+   +I+P F E +  R  L+      ++ R+  +RD
Sbjct: 352 LAYYNRGTLYYEQGKADLALSDFNQALNINPRFAEAYSNRGVLY----YYRLEREKAIRD 407

Query: 719 SLKKGKLRRQ 728
             +  +L RQ
Sbjct: 408 LRQAAELYRQ 417



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 5/152 (3%)

Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +++++++ RL     +RG+    +GK   A+S ++Q L  +P +  A   RGT    Q +
Sbjct: 273 NQALNINPRLDLAYSNRGLLYDIQGKPDLALSDYNQALNINPRFALAYNNRGTLYYKQGK 332

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + A+SD+ +A+  NP    A+  RG      G++  A+ D ++AL   P  A+    RG
Sbjct: 333 SDLALSDYNQALNINPRLALAYYNRGTLYYEQGKADLALSDFNQALNINPRFAEAYSNRG 392

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           ++ +   +   A+ DL    +L ++  +A  Y
Sbjct: 393 VLYYYRLEREKAIRDLRQAAELYRQQGNAAAY 424


>gi|254412859|ref|ZP_05026632.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196180594|gb|EDX75585.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 435

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 28/271 (10%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG  +A Q +LE AI +F +A++ NP   EA+ RRG AR  LG+   AI D S+AL   P
Sbjct: 8   RGREKAQQGDLEGAIQEFEQALRINPEFAEAYYRRGLARFDLGDCQSAIADYSQALRVNP 67

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA---- 536
              D    R +      +  A++ED    +++D   ++AY   G A   +G+ K+A    
Sbjct: 68  EHLDSYLGRSLAYLAQGEAQASLEDAQQVLQIDGNREAAYKLQGTAYRRLGKTKEAIASF 127

Query: 537 -EEAHLKAIQLDRN---------------------FLEAWGHLTQFYQDLANSE--KALE 572
            + A L   Q D++                       E   +LTQ    L   +  +ALE
Sbjct: 128 KQAAKLYLDQKDKDNCQSCLESIKQIQSAQIQAASAAETQKYLTQVINKLQQGKHREALE 187

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
             Q +L++    ++AY  RG++   LG  + A++DL   + +DP++I+  + R      +
Sbjct: 188 DCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAMEDLGRAMQLDPNDIQVRHYRGRVRIEL 247

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           G+YR AI D+   L+L+ D+ + +V +  A+
Sbjct: 248 GDYRGAIADFTQLLELQPDNSQYYVCRGQAY 278



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 133/296 (44%), Gaps = 28/296 (9%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+ + G   SAI+ + Q L+ +P + ++ +GR  A   Q E +A++ D  + +Q + 
Sbjct: 42  RGLARFDLGDCQSAIADYSQALRVNPEHLDSYLGRSLAYLAQGEAQASLEDAQQVLQIDG 101

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD---------------------- 484
           +   A+K +G A   LG++ EAI    +A +   +  D                      
Sbjct: 102 NREAAYKLQGTAYRRLGKTKEAIASFKQAAKLYLDQKDKDNCQSCLESIKQIQSAQIQAA 161

Query: 485 -----ILHERGIVN-FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
                  +   ++N  +      A+ED    + +   +  AY Y G+  S +G  + A E
Sbjct: 162 SAAETQKYLTQVINKLQQGKHREALEDCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAME 221

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
              +A+QLD N ++   +  +   +L +   A+    Q+L +    S+ Y  RG     L
Sbjct: 222 DLGRAMQLDPNDIQVRHYRGRVRIELGDYRGAIADFTQLLELQPDNSQYYVCRGQAYSKL 281

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           G +++ I+D S GL I P++ +  Y RA+      +Y+ A  DY  A +L  +  +
Sbjct: 282 GDYRQGIEDYSRGLTIQPNDPQIYYHRAAARADFQDYQGAADDYQQAANLYFEKQD 337



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 8/174 (4%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+ D    +   P+   A+  RG  R+ LG    A++DL +A++ +PN   + H RG V 
Sbjct: 185 ALEDCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAMEDLGRAMQLDPNDIQVRHYRGRVR 244

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  D+  A+ D +  ++L  +N   Y   G A S +G+Y++  E + + + +  N  + 
Sbjct: 245 IELGDYRGAIADFTQLLELQPDNSQYYVCRGQAYSKLGDYRQGIEDYSRGLTIQPNDPQI 304

Query: 554 WGHLTQFYQDLANSEKALECLQQV--LYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           + H      D  + + A +  QQ   LY +K+  + YH        L Q K+ I
Sbjct: 305 YYHRAAARADFQDYQGAADDYQQAANLYFEKQDWQKYH------QALNQQKQQI 352



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 75/162 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L++ I ++ +GK+  A+     +L   P    A   RG  R+    L  A+ D   A+Q 
Sbjct: 170 LTQVINKLQQGKHREALEDCQWLLHVAPNDARAYCYRGIIRSKLGNLRGAMEDLGRAMQL 229

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+  +    RG+ R  LG+   AI D ++ LE +P+++     RG    K  D+   +E
Sbjct: 230 DPNDIQVRHYRGRVRIELGDYRGAIADFTQLLELQPDNSQYYVCRGQAYSKLGDYRQGIE 289

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           D S  + +   +   Y +   A +   +Y+ A + + +A  L
Sbjct: 290 DYSRGLTIQPNDPQIYYHRAAARADFQDYQGAADDYQQAANL 331


>gi|414076416|ref|YP_006995734.1| TPR repeat-containing serine/threonine protein kinase [Anabaena sp.
           90]
 gi|413969832|gb|AFW93921.1| TPR repeat-containing serine/threonine protein kinase [Anabaena sp.
           90]
          Length = 689

 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 135/282 (47%), Gaps = 3/282 (1%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           F + R++   +I +    ++G   +   +Y  A++ +++ +   P YP+AL G+G A   
Sbjct: 320 FMLNRLNNKNAIEL---YNQGNTLIQLQRYQEALATYEKAIDIKPDYPQALYGQGKALFQ 376

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
            ++ + ++  + +AIQ  P+  EAW  RG     L    EAI  + KAL+ + +   I  
Sbjct: 377 LKKYQESLIAYDQAIQIQPNYLEAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQ 436

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G +  K   +N A++     +    +N   +   GLA  ++ +Y++A  A+ K ++L 
Sbjct: 437 LKGDIFIKISQYNDAIKAYEQAINFQADNPELWYKKGLAFQNLKQYEEAITAYKKTVELK 496

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +   AW +L     +L   E AL+   Q +  ++  S A+  R  +L  L ++ +AI  
Sbjct: 497 PDHESAWYNLGNCLVNLNRYEFALQAYDQAVQYNQNNSAAWLSRSNILMTLRRYSEAIDS 556

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            +  +  +P   +  Y R    H +  Y EAI+ Y  A+ L+
Sbjct: 557 FTQVIKTNPQQYQAWYNRGWALHQVKRYGEAIESYKKAISLK 598



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/307 (20%), Positives = 127/307 (41%), Gaps = 47/307 (15%)

Query: 361 EAKRNKKFCVTRISK-SKSI-SVDFRLS-----------RGIAQVNEGKYASAISIFDQI 407
           EA  N+ F + R+ + S++I +VD  L            +G   +   +Y  AI  ++Q 
Sbjct: 399 EAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQLKGDIFIKISQYNDAIKAYEQA 458

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           +      PE    +G A    ++ E AI+ + + ++  P    AW   G     L     
Sbjct: 459 INFQADNPELWYKKGLAFQNLKQYEEAITAYKKTVELKPDHESAWYNLGNCLVNLNRYEF 518

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           A+Q   +A+++  N++     R  +    + ++ A++  +  +K + +   A+   G AL
Sbjct: 519 ALQAYDQAVQYNQNNSAAWLSRSNILMTLRRYSEAIDSFTQVIKTNPQQYQAWYNRGWAL 578

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             +  Y +A E++ KAI L  N    W        +L N++                   
Sbjct: 579 HQVKRYGEAIESYKKAISLKSNDYLVW-------YNLGNTQ------------------- 612

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
                   + L ++++AI   +      P++ E  Y + + +  + +Y++AI  YD A++
Sbjct: 613 --------YNLQKYQEAIASYNKATRYKPNHYESWYSKGNAWLNLQQYQQAIASYDKAIE 664

Query: 648 LELDSME 654
            + D  +
Sbjct: 665 YKPDYQQ 671



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 74/166 (44%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L+ +G    + + +  A+      + +  +   A    G AL  + +Y+++  A+ +AIQ
Sbjct: 333 LYNQGNTLIQLQRYQEALATYEKAIDIKPDYPQALYGQGKALFQLKKYQESLIAYDQAIQ 392

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +  N+LEAW +       L    +A+  + + L +     + + L+G +   + Q+  AI
Sbjct: 393 IQPNYLEAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQLKGDIFIKISQYNDAI 452

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           K     +     N E  Y +   +  + +Y EAI  Y   ++L+ D
Sbjct: 453 KAYEQAINFQADNPELWYKKGLAFQNLKQYEEAITAYKKTVELKPD 498



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 94/199 (47%), Gaps = 13/199 (6%)

Query: 499 FNAAVEDLSACVKLDK-ENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEA-W 554
           F   +    A   L++  NK+A      G  L  +  Y++A   + KAI +  ++ +A +
Sbjct: 309 FGLGISSFGAIFMLNRLNNKNAIELYNQGNTLIQLQRYQEALATYEKAIDIKPDYPQALY 368

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           G     +Q L   +++L    Q + I   + +A+  RG +L  L ++ +AI  +   L +
Sbjct: 369 GQGKALFQ-LKKYQESLIAYDQAIQIQPNYLEAWTNRGFVLVRLKRYSEAIATVDKALQL 427

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIA 669
              + +   L+   +  I +Y +AIK Y+ A++ + D+ E +  + LAF     Y++ I 
Sbjct: 428 KNDDPQIWQLKGDIFIKISQYNDAIKAYEQAINFQADNPELWYKKGLAFQNLKQYEEAIT 487

Query: 670 LYTAS---KINSEFCWFDI 685
            Y  +   K + E  W+++
Sbjct: 488 AYKKTVELKPDHESAWYNL 506



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 38/167 (22%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQL---DPTLLQ 104
           SL  + +AI+I      Q   ++   NR F   +L+ +   I   DKALQL   DP + Q
Sbjct: 383 SLIAYDQAIQI------QPNYLEAWTNRGFVLVRLKRYSEAIATVDKALQLKNDDPQIWQ 436

Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSAD--------------LKQFLELEELL 150
              LKG  F  + +  +A+    K YE A++  AD              LKQ+   EE +
Sbjct: 437 ---LKGDIFIKISQYNDAI----KAYEQAINFQADNPELWYKKGLAFQNLKQY---EEAI 486

Query: 151 TAAKQDRSVTCE-----YDVSNSMSSLTVSESGLNANDKMSETSENH 192
           TA K+   +  +     Y++ N + +L   E  L A D+  + ++N+
Sbjct: 487 TAYKKTVELKPDHESAWYNLGNCLVNLNRYEFALQAYDQAVQYNQNN 533


>gi|445064286|ref|ZP_21376363.1| hypothetical protein H263_12694 [Brachyspira hampsonii 30599]
 gi|444504339|gb|ELV05024.1| hypothetical protein H263_12694 [Brachyspira hampsonii 30599]
          Length = 352

 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 126/233 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+GI +   G+Y  AI  +D+ +K +P   +A   +G A+     L+ AI ++ +AI+  
Sbjct: 103 SKGIYKSANGQYLEAIKYYDEAIKLNPNMADAYYNKGIAKTKLGFLKEAIEEYNKAIELR 162

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               +A+  RG  ++ LG   EAI+D  KAL  +PN  D  H +G++  +   F  A++D
Sbjct: 163 ADYTDAYYNRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYHNKGVLENELGLFKEAIKD 222

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K+  ++   Y   G +  ++  Y+++ + + KAI+L+ N+  A+ +      +L 
Sbjct: 223 FNKAIKIADDDAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPNYAFAYNNRGNAKDNLG 282

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
             E+A++   + + ++  ++ AY+ RG     LG +++A+KD    L +DP+N
Sbjct: 283 LYEEAIKDFDKAIKLNPDYADAYNNRGYSKENLGLYEEALKDYKKALKLDPNN 335



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 113/245 (46%), Gaps = 17/245 (6%)

Query: 424 ARAFQRELEAAISD-------FTEAIQSNPSAG----------EAWKRRGQARAALGESV 466
           A+ F  EL   ISD       FT  + +                 +  +G  ++A G+ +
Sbjct: 56  AKTFNEELNKIISDKIYLIGSFTNIVDNKKKVDIDSLNILTDYHDYNSKGIYKSANGQYL 115

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           EAI+   +A++  PN AD  + +GI   K      A+E+ +  ++L  +   AY   GL 
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKGIAKTKLGFLKEAIEEYNKAIELRADYTDAYYNRGLL 175

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
            S +G  ++A +   KA+ +D N  +A+ +      +L   ++A++   + + I    + 
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYHNKGVLENELGLFKEAIKDFNKAIKIADDDAV 235

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            Y+ RG   + L  ++++IKD    + ++P+       R +    +G Y EAIKD+D A+
Sbjct: 236 IYNNRGNSKYNLELYEESIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIKDFDKAI 295

Query: 647 DLELD 651
            L  D
Sbjct: 296 KLNPD 300



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 79/152 (51%), Gaps = 13/152 (8%)

Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILK--EDPMYPEALI--GRGTARAF 427
           K++S+D  L     ++G+ +   G +  AI  F++ +K  +D    +A+I   RG ++  
Sbjct: 191 KALSIDPNLFDAYHNKGVLENELGLFKEAIKDFNKAIKIADD----DAVIYNNRGNSKYN 246

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
               E +I D+ +AI+ NP+   A+  RG A+  LG   EAI+D  KA++  P+ AD  +
Sbjct: 247 LELYEESIKDYDKAIKLNPNYAFAYNNRGNAKDNLGLYEEAIKDFDKAIKLNPDYADAYN 306

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
            RG        +  A++D    +KLD  N+ A
Sbjct: 307 NRGYSKENLGLYEEALKDYKKALKLDPNNEYA 338



 Score = 46.6 bits (109), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 11/111 (9%)

Query: 24  DELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDICNRAFC 78
           DE ++++  MA A      A+ +L  L  ++  ++KAI +        Y      NR   
Sbjct: 122 DEAIKLNPNMADAYYNKGIAKTKLGFLKEAIEEYNKAIELRADYTDAYY------NRGLL 175

Query: 79  YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
            S L L +  I+D DKAL +DP L  AY  KG   + LG  +EA+  + K 
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYHNKGVLENELGLFKEAIKDFNKA 226



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++++++KAI+I D       +     NR      LEL++  I+D DKA++L+P    AY 
Sbjct: 219 AIKDFNKAIKIADD------DAVIYNNRGNSKYNLELYEESIKDYDKAIKLNPNYAFAYN 272

Query: 108 LKGCAFSALGRKEEALSVWEKG 129
            +G A   LG  EEA+  ++K 
Sbjct: 273 NRGNAKDNLGLYEEAIKDFDKA 294



 Score = 43.5 bits (101), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 6/82 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           S++++ KAI+ L+   A +Y      NR      L L++  I+D DKA++L+P    AY 
Sbjct: 253 SIKDYDKAIK-LNPNYAFAYN-----NRGNAKDNLGLYEEAIKDFDKAIKLNPDYADAYN 306

Query: 108 LKGCAFSALGRKEEALSVWEKG 129
            +G +   LG  EEAL  ++K 
Sbjct: 307 NRGYSKENLGLYEEALKDYKKA 328


>gi|282895338|ref|ZP_06303539.1| TPR repeat protein [Raphidiopsis brookii D9]
 gi|281199589|gb|EFA74450.1| TPR repeat protein [Raphidiopsis brookii D9]
          Length = 260

 Score =  107 bits (268), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 65/224 (29%), Positives = 112/224 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  + + G    AI+ F Q +   P    A   RG A     + + AISDFT+ I+ N
Sbjct: 27  NRGATRNDLGDKQGAINDFSQFINFYPRNSLAYFNRGIAWHELGDKQRAISDFTQVIKLN 86

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG +R+ LG+   AI D +  +   PN A   + RG+      D   A+ D
Sbjct: 87  PNNVAAYYNRGASRSDLGDKHGAINDFTTVINLNPNFAQPYYNRGLARHNLGDKQGAISD 146

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LD  + +AY   G+A   +G+ + A     +AIQ+  NF +A+ +      ++ 
Sbjct: 147 FTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDFTQAIQISPNFAQAYNNRGLARHNMG 206

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           + + A+    Q + I+  F++AY+ RG   + LG  + AI+D +
Sbjct: 207 DKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGDKEGAIRDFN 250



 Score =  105 bits (261), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 66/254 (25%), Positives = 120/254 (47%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G    AIS F Q +  +P + +    RG  R    + + AI+DF++ I   P    A+  
Sbjct: 2   GDKQGAISDFTQAINLNPNFAQPYYNRGATRNDLGDKQGAINDFSQFINFYPRNSLAYFN 61

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A   LG+   AI D ++ ++  PN+    + RG       D + A+ D +  + L+ 
Sbjct: 62  RGIAWHELGDKQRAISDFTQVIKLNPNNVAAYYNRGASRSDLGDKHGAINDFTTVINLNP 121

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
                Y   GLA  ++G+ + A     ++++LD     A+ +      D+ + + A+   
Sbjct: 122 NFAQPYYNRGLARHNLGDKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDF 181

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + I   F++AY+ RGL  H +G  + AI D +  + I+P+  +    R +  + +G+
Sbjct: 182 TQAIQISPNFAQAYNNRGLARHNMGDKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGD 241

Query: 635 YREAIKDYDAALDL 648
              AI+D++ A  L
Sbjct: 242 KEGAIRDFNKASQL 255



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 46/127 (36%), Positives = 68/127 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+ N G    AIS F Q L+ D   P A   RG AR    + + AI+DFT+AIQ +
Sbjct: 129 NRGLARHNLGDKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDFTQAIQIS 188

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +A+  RG AR  +G+   AI D ++A++  PN A   + RG       D   A+ D
Sbjct: 189 PNFAQAYNNRGLARHNMGDKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGDKEGAIRD 248

Query: 506 LSACVKL 512
            +   +L
Sbjct: 249 FNKASQL 255



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 6/225 (2%)

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           +G+   AI D ++A+   PN A   + RG       D   A+ D S  +     N  AY 
Sbjct: 1   MGDKQGAISDFTQAINLNPNFAQPYYNRGATRNDLGDKQGAINDFSQFINFYPRNSLAYF 60

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G+A   +G+ ++A     + I+L+ N + A+ +      DL +   A+     V+ ++
Sbjct: 61  NRGIAWHELGDKQRAISDFTQVIKLNPNNVAAYYNRGASRSDLGDKHGAINDFTTVINLN 120

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
             F++ Y+ RGL  H LG  + AI D +  L +D  +      R    + +G+ + AI D
Sbjct: 121 PNFAQPYYNRGLARHNLGDKQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAIND 180

Query: 642 YDAALDLELDSMEKFVLQCLAFY-----QKEIALYT-ASKINSEF 680
           +  A+ +  +  + +  + LA +     Q  I+ +T A +IN  F
Sbjct: 181 FTQAIQISPNFAQAYNNRGLARHNMGDKQGAISDFTQAIQINPNF 225



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 86/176 (48%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T++ K    +V    +RG ++ + G    AI+ F  ++  +P + +    RG AR    +
Sbjct: 80  TQVIKLNPNNVAAYYNRGASRSDLGDKHGAINDFTTVINLNPNFAQPYYNRGLARHNLGD 139

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AISDFT++++ +     A+  RG AR  +G+   AI D ++A++  PN A   + RG
Sbjct: 140 KQGAISDFTQSLRLDYRDPTAYNNRGIARYDMGDRQGAINDFTQAIQISPNFAQAYNNRG 199

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +      D   A+ D +  ++++     AY   G   + +G+ + A     KA QL
Sbjct: 200 LARHNMGDKQGAISDFTQAIQINPNFAQAYNNRGATRNDLGDKEGAIRDFNKASQL 255


>gi|167392258|ref|XP_001740075.1| tetratricopeptide repeat protein, tpr [Entamoeba dispar SAW760]
 gi|165895952|gb|EDR23527.1| tetratricopeptide repeat protein, tpr, putative [Entamoeba dispar
            SAW760]
          Length = 471

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 107/181 (59%), Gaps = 11/181 (6%)

Query: 844  KMSWQDVYTLAVKWRQISEPCDPVVWVNKLS-EEFNSGFGSHTPMILGQAKVVRYFPNYA 902
            +M W+++  + VK+RQ++EP D  +W++KL  ++F  GFGS+T +   Q +V RY+P + 
Sbjct: 195  QMGWREIAEILVKFRQVAEPADGAIWIDKLPRQQFEEGFGSNTTLKTAQTRVARYWPMFP 254

Query: 903  RTLDVAKTVM-------KDKKYVHNKADDIIDLSEDVVGEDFWLATWCNSTAFEGKQLEG 955
            RT  + K +        K+KK +  KA+ + ++ + +  ++F++ T C +   EG +LEG
Sbjct: 255  RTFGLFKKLFEEESGASKEKKQLVAKAETVDEVQKVLKRDNFFMTTICRNE--EGTRLEG 312

Query: 956  TRITLVKMGESGYDFAIRTPCTPSRWDEFDAEMTMAWEVDWEAILNSDPHFFLDSVKSWL 1015
            T + + K+ E G  F+I+TPCTP R+  FD E+  A +  +    ++D    LD+V  + 
Sbjct: 313  TWLLIEKV-ELGSMFSIKTPCTPKRYKVFDVELKKALDKYYTVQHSNDQDKVLDAVLRFC 371

Query: 1016 Y 1016
            Y
Sbjct: 372  Y 372


>gi|300869589|ref|ZP_07114170.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria
           sp. PCC 6506]
 gi|300332457|emb|CBN59370.1| TPR repeat-containing serine/threonin protein kinase [Oscillatoria
           sp. PCC 6506]
          Length = 735

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 151/337 (44%), Gaps = 40/337 (11%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG+ +   G  A AI+ F++ ++ +P   E    R  A    +  EAAI+D+T+AI  
Sbjct: 343 FDRGVEKSQVGDAAGAIAAFNKSIQLNPQSAEVFYKRANANYDLKNYEAAIADYTQAIAL 402

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+  +A+  RG  R  + +   AI+D ++ L+ +PN  D  +ERG+  F  +D+  A++
Sbjct: 403 DPNYVKAYFNRGLTRFEIKDLRGAIEDYTQLLKLQPNDPDAYYERGLAYFGLQDYPVAIK 462

Query: 505 DLSACVKL----------------------------------DKENKSAYTYLGLALSSI 530
           D +  ++L                                  +  N  AY   G A   +
Sbjct: 463 DFTQVIRLQPSLAKAHHARGMARAAGADLQGAMGDYTEAIRLEPSNVDAYYSRGRARFHL 522

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G+YK A   + + I++D   ++A+ +      +L   + A++   Q + ++ + S  Y+ 
Sbjct: 523 GDYKGALADYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAIDDCTQAIALNSQDSVPYNN 582

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           R +    L  ++KAI D S  + ++P N      R   + A G+   A+ DY AA+ L  
Sbjct: 583 RCIAYLNLKDYQKAIDDCSQAIKVNPKNDSAYSNRGLAHSAAGDREGAVADYTAAIGLNP 642

Query: 651 DSMEKF-----VLQCLAFYQKEIALYT-ASKINSEFC 681
           +  E +     +   L  Y+  +A Y  A ++N  F 
Sbjct: 643 NDYEAYSNRAKIHYDLKNYEDALADYVQAIRLNPNFA 679



 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 135/273 (49%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+ +        AI  + Q+LK  P  P+A   RG A    ++   AI DFT+ I+ 
Sbjct: 411 FNRGLTRFEIKDLRGAIEDYTQLLKLQPNDPDAYYERGLAYFGLQDYPVAIKDFTQVIRL 470

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            PS  +A   RG ARAA  +   A+ D ++A+  EP++ D  + RG   F   D+  A+ 
Sbjct: 471 QPSLAKAHHARGMARAAGADLQGAMGDYTEAIRLEPSNVDAYYSRGRARFHLGDYKGALA 530

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D S  +++D ++  AY        ++G ++ A +   +AI L+      + +    Y +L
Sbjct: 531 DYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAIDDCTQAIALNSQDSVPYNNRCIAYLNL 590

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + +KA++   Q + ++ +   AY  RGL     G  + A+ D ++ +G++P++ E    
Sbjct: 591 KDYQKAIDDCSQAIKVNPKNDSAYSNRGLAHSAAGDREGAVADYTAAIGLNPNDYEAYSN 650

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           RA  ++ +  Y +A+ DY  A+ L  +    +V
Sbjct: 651 RAKIHYDLKNYEDALADYVQAIRLNPNFAAAYV 683



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 34/272 (12%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T++ K +    D    RG+A      Y  AI  F Q+++  P   +A   RG ARA   +
Sbjct: 431 TQLLKLQPNDPDAYYERGLAYFGLQDYPVAIKDFTQVIRLQPSLAKAHHARGMARAAGAD 490

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI----- 485
           L+ A+ D+TEAI+  PS  +A+  RG+AR  LG+   A+ D S+ +  +  S D      
Sbjct: 491 LQGAMGDYTEAIRLEPSNVDAYYSRGRARFHLGDYKGALADYSQVIRIDSKSVDAYANRC 550

Query: 486 -----------------------------LHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                                         + R I     KD+  A++D S  +K++ +N
Sbjct: 551 STQLNLGAHQAAIDDCTQAIALNSQDSVPYNNRCIAYLNLKDYQKAIDDCSQAIKVNPKN 610

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
            SAY+  GLA S+ G+ + A   +  AI L+ N  EA+ +  + + DL N E AL    Q
Sbjct: 611 DSAYSNRGLAHSAAGDREGAVADYTAAIGLNPNDYEAYSNRAKIHYDLKNYEDALADYVQ 670

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            + ++  F+ AY  RG +   LG    AI D 
Sbjct: 671 AIRLNPNFAAAYVGRGNVRRILGDKPGAISDF 702



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 5/265 (1%)

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           + +P+  +    RG  ++   +   AI+ F ++IQ NP + E + +R  A   L     A
Sbjct: 333 RPNPVKAKEYFDRGVEKSQVGDAAGAIAAFNKSIQLNPQSAEVFYKRANANYDLKNYEAA 392

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I D ++A+  +PN       RG+  F+ KD   A+ED +  +KL   +  AY   GLA  
Sbjct: 393 IADYTQAIALDPNYVKAYFNRGLTRFEIKDLRGAIEDYTQLLKLQPNDPDAYYERGLAYF 452

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            + +Y  A +   + I+L  +  +A           A+ + A+    + + ++     AY
Sbjct: 453 GLQDYPVAIKDFTQVIRLQPSLAKAHHARGMARAAGADLQGAMGDYTEAIRLEPSNVDAY 512

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + RG     LG +K A+ D S  + ID  +++    R S    +G ++ AI D   A+ L
Sbjct: 513 YSRGRARFHLGDYKGALADYSQVIRIDSKSVDAYANRCSTQLNLGAHQAAIDDCTQAIAL 572

Query: 649 ELDSMEKFVLQCLAF-----YQKEI 668
                  +  +C+A+     YQK I
Sbjct: 573 NSQDSVPYNNRCIAYLNLKDYQKAI 597


>gi|300868026|ref|ZP_07112664.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp.
           PCC 6506]
 gi|300333946|emb|CBN57842.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp.
           PCC 6506]
          Length = 702

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 128/256 (50%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  AI+ F++ L+  P YPEA  G+G A    +  E AI+ + +A++S P+  +AW  +
Sbjct: 415 KYQEAIASFERALEIQPDYPEAWKGKGDALLNLQRYEEAIASYEKAVKSQPNFYDAWYSK 474

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   L +   A     +A+E + +++   +  G V  +      AVE     V+    
Sbjct: 475 GIAHQNLKQYQPAFDAYKQAVELKSDNSKAWYNLGNVQLELNKNQEAVEAYEKAVRFQPT 534

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              A+   G+AL  + +Y+ A +A+ +A+ L  N+ +AW +L      L   E A++   
Sbjct: 535 YYQAWYSRGIALMKLRQYEDAAKAYKQAVTLKGNYYQAWYNLGWSLHQLRRYEDAIDAYN 594

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           +VL +  R  +A++ +G  L+ L ++++AI   +  + + P   E  Y R +    +  Y
Sbjct: 595 KVLDLQSREYQAWYNKGNALYNLKRYEEAIASYNEAVYVKPDYYEAWYSRGNGLLELKRY 654

Query: 636 REAIKDYDAALDLELD 651
           ++AI  YD A+  + D
Sbjct: 655 QDAIASYDKAVRYKPD 670



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 139/315 (44%), Gaps = 7/315 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    N  +Y  A++ ++Q +K    Y E    +  A    ++ + +     +AIQ N
Sbjct: 337 TRGNTLYNLNRYEEALAAYNQAIKIKGDYAEVWKDKAKALYELKKYKESREACDKAIQLN 396

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG     L +  EAI    +ALE +P+  +    +G      + +  A+  
Sbjct: 397 PEYLEAWTDRGYTLDKLEKYQEAIASFERALEIQPDYPEAWKGKGDALLNLQRYEEAIAS 456

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               VK       A+   G+A  ++ +Y+ A +A+ +A++L  +  +AW +L     +L 
Sbjct: 457 YEKAVKSQPNFYDAWYSKGIAHQNLKQYQPAFDAYKQAVELKSDNSKAWYNLGNVQLELN 516

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +++A+E  ++ +     + +A++ RG+ L  L Q++ A K     + +  +  +  Y  
Sbjct: 517 KNQEAVEAYEKAVRFQPTYYQAWYSRGIALMKLRQYEDAAKAYKQAVTLKGNYYQAWYNL 576

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
               H +  Y +AI  Y+  LDL+    +       A+Y K  ALY   +       ++ 
Sbjct: 577 GWSLHQLRRYEDAIDAYNKVLDLQSREYQ-------AWYNKGNALYNLKRYEEAIASYNE 629

Query: 686 DGDIDPLFKEYWCKR 700
              + P + E W  R
Sbjct: 630 AVYVKPDYYEAWYSR 644



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 81/175 (46%)

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
           F   +A  LH RG   +    +  A+   +  +K+  +    +     AL  + +YK++ 
Sbjct: 327 FNSANATELHTRGNTLYNLNRYEEALAAYNQAIKIKGDYAEVWKDKAKALYELKKYKESR 386

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           EA  KAIQL+  +LEAW         L   ++A+   ++ L I   + +A+  +G  L  
Sbjct: 387 EACDKAIQLNPEYLEAWTDRGYTLDKLEKYQEAIASFERALEIQPDYPEAWKGKGDALLN 446

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           L ++++AI      +   P+  +  Y +   +  + +Y+ A   Y  A++L+ D+
Sbjct: 447 LQRYEEAIASYEKAVKSQPNFYDAWYSKGIAHQNLKQYQPAFDAYKQAVELKSDN 501


>gi|225619724|ref|YP_002720981.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214543|gb|ACN83277.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 424

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 35/313 (11%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI +   G Y  AI+ + + ++ D  Y E    R    +     EAAI+D+ + I+  P+
Sbjct: 41  GITKQALGFYEEAINYYSKGIEIDENYAELYYNRANCESNLGLYEAAINDYDKVIELVPT 100

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +A+  RG A+  LG   EAI+D+ KA+  + N+ D   +R  +    K +  A+ED  
Sbjct: 101 HSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYK 160

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ---------------------- 545
             ++LD     AY  +G A  SIG Y++A   + K I+                      
Sbjct: 161 KVLELDDTEVYAYNGIGDAKRSIGLYEEAISYYNKVIEISNSNSSYAYNNRGACKIGLGL 220

Query: 546 -----LDRN-FLEAWGHLTQFYQ-------DLANSEKALECLQQVLYIDKRFSKAYHLRG 592
                +D N  LE +   T  Y        +L   ++A+E   + + +  ++  AY+ RG
Sbjct: 221 YNEAIIDINKALEIYDEYTDAYNNRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRG 280

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
                LG ++ AI+D +  + I+P  I+  Y RA   + +G + EAIKDYD  ++L+ + 
Sbjct: 281 NSKSALGLYEDAIEDFNIAINIEPKYIDAYYNRAVAKNNMGLHNEAIKDYDIVIELDSNH 340

Query: 653 MEKFVLQCLAFYQ 665
           +  +  + L++Y 
Sbjct: 341 INAYYNRALSYYN 353



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 137/273 (50%), Gaps = 1/273 (0%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S ++D  + R   ++   KY  AI  + ++L+ D     A  G G A+      E AIS 
Sbjct: 133 SNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAISY 192

Query: 438 FTEAIQ-SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           + + I+ SN ++  A+  RG  +  LG   EAI D++KALE      D  + RG   +  
Sbjct: 193 YNKVIEISNSNSSYAYNNRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAKYNL 252

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           + +  A+ED    ++L  +   AY   G + S++G Y+ A E    AI ++  +++A+ +
Sbjct: 253 ELYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAIEDFNIAINIEPKYIDAYYN 312

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                 ++    +A++    V+ +D     AY+ R L  + L  +++AIK+    + ++P
Sbjct: 313 RAVAKNNMGLHNEAIKDYDIVIELDSNHINAYYNRALSYYNLSDYEEAIKNYDKVIELNP 372

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            + E    R    ++IG Y EA+KDYD A++++
Sbjct: 373 KSAEAYNNRGFAKYSIGLYEEALKDYDKAIEID 405



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 3/286 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A+ N G Y  AI   D+ +  D    +A I R   +   ++   AI D+ + ++ + 
Sbjct: 108 RGYAKGNLGYYEEAIKDIDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKVLELDD 167

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAVED 505
           +   A+   G A+ ++G   EAI   +K +E    NS+   + RG        +N A+ D
Sbjct: 168 TEVYAYNGIGDAKRSIGLYEEAISYYNKVIEISNSNSSYAYNNRGACKIGLGLYNEAIID 227

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           ++  +++  E   AY   G A  ++  YK+A E   KAI+L   +  A+ +       L 
Sbjct: 228 INKALEIYDEYTDAYNNRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALG 287

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E A+E     + I+ ++  AY+ R +  + +G H +AIKD    + +D ++I   Y R
Sbjct: 288 LYEDAIEDFNIAINIEPKYIDAYYNRAVAKNNMGLHNEAIKDYDIVIELDSNHINAYYNR 347

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           A  Y+ + +Y EAIK+YD  ++L   S E +  +  A Y   I LY
Sbjct: 348 ALSYYNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYS--IGLY 391



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 2/218 (0%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           V  IS S S S  +  +RG  ++  G Y  AI   ++ L+    Y +A   RGTA+    
Sbjct: 196 VIEISNSNS-SYAYN-NRGACKIGLGLYNEAIIDINKALEIYDEYTDAYNNRGTAKYNLE 253

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
             + AI DF +AI+ +P    A+  RG +++ALG   +AI+D + A+  EP   D  + R
Sbjct: 254 LYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAIEDFNIAINIEPKYIDAYYNR 313

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            +        N A++D    ++LD  + +AY    L+  ++ +Y++A + + K I+L+  
Sbjct: 314 AVAKNNMGLHNEAIKDYDIVIELDSNHINAYYNRALSYYNLSDYEEAIKNYDKVIELNPK 373

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             EA+ +       +   E+AL+   + + ID  + KA
Sbjct: 374 SAEAYNNRGFAKYSIGLYEEALKDYDKAIEIDSNYEKA 411



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 2/184 (1%)

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           E G+  F+   F  A       ++ D+ N   Y YLG+   ++G Y++A   + K I++D
Sbjct: 5   EEGLQLFRETQFEKAAALFIKALEEDRNNSEIYNYLGITKQALGFYEEAINYYSKGIEID 64

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            N+ E + +      +L   E A+    +V+ +    SKAY  RG     LG +++AIKD
Sbjct: 65  ENYAELYYNRANCESNLGLYEAAINDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKD 124

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           +   + +D +NI+    RA       +Y EAI+DY     LELD  E +    +   ++ 
Sbjct: 125 IDKAIVLDSNNIDAYIDRAFIKLMSKKYIEAIEDYKKV--LELDDTEVYAYNGIGDAKRS 182

Query: 668 IALY 671
           I LY
Sbjct: 183 IGLY 186



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 112/224 (50%), Gaps = 5/224 (2%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           + + E A + F +A++ + +  E +   G  + ALG   EAI   SK +E + N A++ +
Sbjct: 13  ETQFEKAAALFIKALEEDRNNSEIYNYLGITKQALGFYEEAINYYSKGIEIDENYAELYY 72

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            R         + AA+ D    ++L   +  AY   G A  ++G Y++A +   KAI LD
Sbjct: 73  NRANCESNLGLYEAAINDYDKVIELVPTHSKAYDDRGYAKGNLGYYEEAIKDIDKAIVLD 132

Query: 548 RNFLEAWGHLTQFYQDLANSE--KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
            N ++A+  + + +  L + +  +A+E  ++VL +D     AY+  G     +G +++AI
Sbjct: 133 SNNIDAY--IDRAFIKLMSKKYIEAIEDYKKVLELDDTEVYAYNGIGDAKRSIGLYEEAI 190

Query: 606 KDLSSGLGIDPSNIECLY-LRASCYHAIGEYREAIKDYDAALDL 648
              +  + I  SN    Y  R +C   +G Y EAI D + AL++
Sbjct: 191 SYYNKVIEISNSNSSYAYNNRGACKIGLGLYNEAIIDINKALEI 234



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 6/82 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++  +SK I I D   A+ Y      NRA C S L L++  I D DK ++L PT  +AY 
Sbjct: 53  AINYYSKGIEI-DENYAELY-----YNRANCESNLGLYEAAINDYDKVIELVPTHSKAYD 106

Query: 108 LKGCAFSALGRKEEALSVWEKG 129
            +G A   LG  EEA+   +K 
Sbjct: 107 DRGYAKGNLGYYEEAIKDIDKA 128



 Score = 43.1 bits (100), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 29/50 (58%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           NR      LEL+K  I D DKA++L P    AY  +G + SALG  E+A+
Sbjct: 244 NRGTAKYNLELYKEAIEDFDKAIELSPQYFYAYNNRGNSKSALGLYEDAI 293



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 35/63 (55%)

Query: 69  IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
           I    NRA  Y  L  ++  I++ DK ++L+P   +AY  +G A  ++G  EEAL  ++K
Sbjct: 341 INAYYNRALSYYNLSDYEEAIKNYDKVIELNPKSAEAYNNRGFAKYSIGLYEEALKDYDK 400

Query: 129 GYE 131
             E
Sbjct: 401 AIE 403


>gi|307154716|ref|YP_003890100.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
 gi|306984944|gb|ADN16825.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
          Length = 708

 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 144/291 (49%), Gaps = 11/291 (3%)

Query: 368 FCVTRISKSKSISVDFRLSRGIA--QVNEG-------KYASAISIFDQILKEDPMYPEAL 418
             +  ++    +S+D+ LS   A    N+G       +Y  A+  +D  L  +P    A 
Sbjct: 310 LAIIGLAAGGVVSIDYWLSLNNATKMYNKGNTLYQLQRYEDALQAYDTSLNINPNNANAW 369

Query: 419 IGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
            G+G T +A +R  + A+  + EAIQ  P + +AW  RG+    LG ++EAI    K + 
Sbjct: 370 QGKGDTLQALKR-YQQALDSYDEAIQIQPDSWQAWMGRGKVLEKLGRNLEAINSYEKVII 428

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
           F+ NS +     G +  K   ++ A++DL   +KL+ +N+ A+   G +L ++ +Y+ A 
Sbjct: 429 FKDNSWEAWSNLGELKVKLAQYSEAIKDLEKSLKLNPDNEEAWYQKGWSLQNLKKYEDAI 488

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           +++ + ++++ +F +AW      Y +L    +A E   + +       +A++ +G+ L+ 
Sbjct: 489 KSYDETVKVNSSFSQAWYQKGNIYMNLEKYNEASENYAKAVQFQPDLYQAWYSQGIALNR 548

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           L ++++A+K       +   + E  Y +A   H +  Y EA+  Y  A+ L
Sbjct: 549 LNRYEEALKTFEKATQVQSLSFEAWYQKAWTLHILKRYAEAVSAYTTAIRL 599



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 106/234 (45%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G  +V   +Y+ AI   ++ LK +P   EA   +G +    ++ E AI  + E ++ N S
Sbjct: 441 GELKVKLAQYSEAIKDLEKSLKLNPDNEEAWYQKGWSLQNLKKYEDAIKSYDETVKVNSS 500

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +AW ++G     L +  EA ++ +KA++F+P+     + +GI   +   +  A++   
Sbjct: 501 FSQAWYQKGNIYMNLEKYNEASENYAKAVQFQPDLYQAWYSQGIALNRLNRYEEALKTFE 560

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
              ++   +  A+      L  +  Y +A  A+  AI+L     +AW +      +    
Sbjct: 561 KATQVQSLSFEAWYQKAWTLHILKRYAEAVSAYTTAIRLRPRDQQAWYNKANSLYNFGEY 620

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           E+A    +QV+ + K +  A+   G  L  L ++++AI   +  L   P   E 
Sbjct: 621 EEATAAYKQVIALQKDYYPAWKSLGNSLLKLERYQEAINAYNQALRYKPDQPEV 674



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 114/267 (42%), Gaps = 34/267 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG      G+   AI+ +++++       EA    G  +    +   AI D  ++++ 
Sbjct: 404 MGRGKVLEKLGRNLEAINSYEKVIIFKDNSWEAWSNLGELKVKLAQYSEAIKDLEKSLKL 463

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   EAW ++G +   L +  +AI+   + ++   + +   +++G +    + +N A E
Sbjct: 464 NPDNEEAWYQKGWSLQNLKKYEDAIKSYDETVKVNSSFSQAWYQKGNIYMNLEKYNEASE 523

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           + +  V+   +   A+   G+AL+ +  Y++A +   KA Q+     EAW          
Sbjct: 524 NYAKAVQFQPDLYQAWYSQGIALNRLNRYEEALKTFEKATQVQSLSFEAW---------- 573

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
                              + KA+      LH L ++ +A+   ++ + + P + +  Y 
Sbjct: 574 -------------------YQKAW-----TLHILKRYAEAVSAYTTAIRLRPRDQQAWYN 609

Query: 625 RASCYHAIGEYREAIKDYDAALDLELD 651
           +A+  +  GEY EA   Y   + L+ D
Sbjct: 610 KANSLYNFGEYEEATAAYKQVIALQKD 636



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 87/192 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G +  N  KY  AI  +D+ +K +  + +A   +G       +   A  ++ +A+Q  P
Sbjct: 474 KGWSLQNLKKYEDAIKSYDETVKVNSSFSQAWYQKGNIYMNLEKYNEASENYAKAVQFQP 533

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  +G A   L    EA++   KA + +  S +  +++       K +  AV   
Sbjct: 534 DLYQAWYSQGIALNRLNRYEEALKTFEKATQVQSLSFEAWYQKAWTLHILKRYAEAVSAY 593

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++L   ++ A+     +L + GEY++A  A+ + I L +++  AW  L      L  
Sbjct: 594 TTAIRLRPRDQQAWYNKANSLYNFGEYEEATAAYKQVIALQKDYYPAWKSLGNSLLKLER 653

Query: 567 SEKALECLQQVL 578
            ++A+    Q L
Sbjct: 654 YQEAINAYNQAL 665


>gi|435851441|ref|YP_007313027.1| putative endonuclease related to Holliday junction resolvase
           [Methanomethylovorans hollandica DSM 15978]
 gi|433662071|gb|AGB49497.1| putative endonuclease related to Holliday junction resolvase
           [Methanomethylovorans hollandica DSM 15978]
          Length = 913

 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 151/307 (49%), Gaps = 9/307 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
           S+G A  + G+Y  AI  +D+ ++ +P    A   +G A R+  R+ E AI ++ +AI+ 
Sbjct: 579 SKGFALTDAGRYEEAIQAYDKAIEINPRSDSAWDSKGWALRSLGRD-EEAIQEYDKAIEI 637

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP +   W  +G A ++LG   EAIQ   K +E +         +G+          A++
Sbjct: 638 NPRSASIWNSKGLALSSLGRDEEAIQAFDKVIEIDSKYPHAWDNKGLALSTLGRDEEAIQ 697

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +++D + +  ++  G ALSS+G Y++A +A+ KAI+++      W         L
Sbjct: 698 AYDKAIEIDPKFEGPWSSKGFALSSLGRYEEAIQAYDKAIEINPRSASIWSGKGLALSIL 757

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+A++   +V+ I+ R   A+  +GL L  LG++++AI+     + ++P +      
Sbjct: 758 GRYEEAIQAYDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQAFDKAIEVNPKSDISWAN 817

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
                 ++G+Y EA+  +D A  +E+DSM +     + F     AL  A +       FD
Sbjct: 818 TGYVLSSLGKYEEAMCAFDKA--IEIDSMSEIAWVRMGF-----ALTDAGRYEEAIQAFD 870

Query: 685 IDGDIDP 691
           +  +I+P
Sbjct: 871 VVIEINP 877



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 132/263 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+G+A  + G+   AI  FD++++ D  YP A   +G A +     E AI  + +AI+ +
Sbjct: 647 SKGLALSSLGRDEEAIQAFDKVIEIDSKYPHAWDNKGLALSTLGRDEEAIQAYDKAIEID 706

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     W  +G A ++LG   EAIQ   KA+E  P SA I   +G+       +  A++ 
Sbjct: 707 PKFEGPWSSKGFALSSLGRYEEAIQAYDKAIEINPRSASIWSGKGLALSILGRYEEAIQA 766

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++++  + SA+   GLALSS+G Y++A +A  KAI+++     +W +       L 
Sbjct: 767 YDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQAFDKAIEVNPKSDISWANTGYVLSSLG 826

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + + ID     A+   G  L   G++++AI+     + I+P +    + +
Sbjct: 827 KYEEAMCAFDKAIEIDSMSEIAWVRMGFALTDAGRYEEAIQAFDVVIEINPKSSVIWHTK 886

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
                ++G   EAI+ +D A +L
Sbjct: 887 GFALRSLGREEEAIQAFDRAKEL 909



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 136/284 (47%), Gaps = 17/284 (5%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G A       E AI  + +AI+ NP +  AW  +G A  +LG   EAIQ+  KA+E  P
Sbjct: 580 KGFALTDAGRYEEAIQAYDKAIEINPRSDSAWDSKGWALRSLGRDEEAIQEYDKAIEINP 639

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            SA I + +G+          A++     +++D +   A+   GLALS++G  ++A +A+
Sbjct: 640 RSASIWNSKGLALSSLGRDEEAIQAFDKVIEIDSKYPHAWDNKGLALSTLGRDEEAIQAY 699

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            KAI++D  F   W         L   E+A++   + + I+ R +  +  +GL L  LG+
Sbjct: 700 DKAIEIDPKFEGPWSSKGFALSSLGRYEEAIQAYDKAIEINPRSASIWSGKGLALSILGR 759

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS-----MEK 655
           +++AI+     + I+P +      +     ++G Y EAI+ +D A+++   S        
Sbjct: 760 YEEAIQAYDKVIEINPRSDSAWDSKGLALSSLGRYEEAIQAFDKAIEVNPKSDISWANTG 819

Query: 656 FVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCK 699
           +VL  L  Y++ +            C FD   +ID + +  W +
Sbjct: 820 YVLSSLGKYEEAM------------CAFDKAIEIDSMSEIAWVR 851



 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 32/58 (55%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           N+    S L   +  I+  DKA+++DP     +  KG A S+LGR EEA+  ++K  E
Sbjct: 681 NKGLALSTLGRDEEAIQAYDKAIEIDPKFEGPWSSKGFALSSLGRYEEAIQAYDKAIE 738


>gi|291515779|emb|CBK64989.1| Tetratricopeptide repeat [Alistipes shahii WAL 8301]
          Length = 662

 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 122/273 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA+ N      A   F   ++ +P+Y +A   R   R+     + A+ DF EAI+  P
Sbjct: 66  RGIAKYNLDDLLGAEDDFSTAIRLNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 125

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG  R    +  EAI D  K +  E   AD    RG+     KD   A E+ 
Sbjct: 126 DLPGPYYSRGVTRLLNQQFKEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENF 185

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++ ++EN + Y   G       +YK+AE    KAI+ D  +L ++ +    Y     
Sbjct: 186 NTAIRTNRENPNGYNRRGGLHLQQEQYKEAEADFNKAIECDSAYLLSYFNRALVYNATNR 245

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +AL    +V+ +D   S  Y  R +L   +G +  A++D        P+N+   Y RA
Sbjct: 246 PMQALADFDKVIQLDSTNSLTYFNRAMLRTQIGDYNHALEDYDKVALYSPNNVLVYYNRA 305

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
             Y  +GE   A++DY +A+ L  D    ++ +
Sbjct: 306 GVYAQLGEIERAVEDYTSAIKLYPDFANAYIYR 338



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 95/224 (42%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+ ++   ++  AI  FD+ ++++    +A I RG +    ++   A  +F  AI++N
Sbjct: 133 SRGVTRLLNQQFKEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTTRAYENFNTAIRTN 192

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                 + RRG       +  EA  D +KA+E +         R +V         A+ D
Sbjct: 193 RENPNGYNRRGGLHLQQEQYKEAEADFNKAIECDSAYLLSYFNRALVYNATNRPMQALAD 252

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD  N   Y    +  + IG+Y  A E + K      N +  + +    Y  L 
Sbjct: 253 FDKVIQLDSTNSLTYFNRAMLRTQIGDYNHALEDYDKVALYSPNNVLVYYNRAGVYAQLG 312

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             E+A+E     + +   F+ AY  RG L   L   + A +D S
Sbjct: 313 EIERAVEDYTSAIKLYPDFANAYIYRGRLRELLRDPQGAKEDRS 356



 Score = 47.0 bits (110), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 31/159 (19%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
             R + Q    +Y +++S +   ++ +P  P   + R T RA            +QR   
Sbjct: 487 FERAVTQSLIKQYTNSVSTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 546

Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
                             + A++D  +A++  P    A+  R    A  G   EA +D +
Sbjct: 547 DSDPANRLNNNSKRTYSYDEAVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEAFEDYT 606

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
           KA+   P  A+  + RGI+    KD      DLS   +L
Sbjct: 607 KAISLNPAFAEAYYNRGIIQLFMKDTRKGCLDLSKAGEL 645



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 6/150 (4%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
            L  R   ++  ++   ++S ++ AI+ NPS    +  R   RA + + + +I +  + +
Sbjct: 485 VLFERAVTQSLIKQYTNSVSTYSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 544

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             + + A+ L+      + + +   AV DL+  VKL  +   AY      L+  G   +A
Sbjct: 545 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAVKLFPDFAYAYYNRANLLALSGSLPEA 601

Query: 537 EEAHLKAIQLDRNFLEAW---GHLTQFYQD 563
            E + KAI L+  F EA+   G +  F +D
Sbjct: 602 FEDYTKAISLNPAFAEAYYNRGIIQLFMKD 631


>gi|414077915|ref|YP_006997233.1| hypothetical protein ANA_C12709 [Anabaena sp. 90]
 gi|413971331|gb|AFW95420.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 460

 Score =  107 bits (267), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 119/221 (53%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           +++ + AI D+T+AI  NP+  +A+  RG AR  LG+   AI D ++A+   PN AD  +
Sbjct: 218 KKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQAIRINPNYADTYY 277

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG+ + +  D  +A++D +  + ++     AY   G+A S +G+ + A + + +AI ++
Sbjct: 278 SRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQAININ 337

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            N+  A+ +       L + + A+    Q + I+   + AY  RG   + LG ++ AI D
Sbjct: 338 PNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYHLGDNQSAIDD 397

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            +  + I+P++ +  + R   +  +G+ + AI +Y  A D+
Sbjct: 398 FTQAIKINPNDADAYFNRGVIHSELGDKQGAIINYRKAADI 438



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 115/225 (51%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  +S G    N+  Y  AI  + Q +  +P Y +A   RG AR    + ++AI D+T+
Sbjct: 205 IDKYISLGNECFNKKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQ 264

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI+ NP+  + +  RG A + LG++  AI D ++A+   PN       RGI   +  D  
Sbjct: 265 AIRINPNYADTYYSRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQ 324

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A++D S  + ++     AY   G+A S +G+ + A   + +AI ++ N  +A+ H    
Sbjct: 325 GAIDDYSQAININPNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYN 384

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +  L +++ A++   Q + I+   + AY  RG++   LG  + AI
Sbjct: 385 HYHLGDNQSAIDDFTQAIKINPNDADAYFNRGVIHSELGDKQGAI 429



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 7/168 (4%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   SRG+A    G   SAI  + Q +  +P Y  A   RG AR+   + + AI D+++A
Sbjct: 274 DTYYSRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQA 333

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I  NP+   A+  RG AR+ LG+   AI D ++A+   PN AD    RG  ++   D  +
Sbjct: 334 ININPNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYHLGDNQS 393

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGE-------YKKAEEAHLK 542
           A++D +  +K++  +  AY   G+  S +G+       Y+KA + + K
Sbjct: 394 AIDDFTQAIKINPNDADAYFNRGVIHSELGDKQGAIINYRKAADIYKK 441



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 96/189 (50%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AI D ++A+   PN A     RG+  +   D  +A++D +  ++++      Y   GLA 
Sbjct: 224 AIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQAIRINPNYADTYYSRGLAH 283

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
           S +G+ + A + + +AI ++ N+  A+ +      +L + + A++   Q + I+  +  A
Sbjct: 284 SELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQAININPNYDLA 343

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y  RG+    LG  + AI D +  + I+P++ +  + R   ++ +G+ + AI D+  A+ 
Sbjct: 344 YCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYHLGDNQSAIDDFTQAIK 403

Query: 648 LELDSMEKF 656
           +  +  + +
Sbjct: 404 INPNDADAY 412



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 84/173 (48%), Gaps = 2/173 (1%)

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           F  KD+  A++D +  + ++     AY   GLA   +G+ + A +   +AI+++ N+ + 
Sbjct: 216 FNKKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQAIRINPNYADT 275

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           +      + +L +++ A++   Q + I+  +  AY  RG+    LG  + AI D S  + 
Sbjct: 276 YYSRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQAIN 335

Query: 614 IDPSNIECLYL-RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           I+P N +  Y  R      +G+ + AI DY  A+++  +  + +  +    Y 
Sbjct: 336 INP-NYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYH 387



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 7/181 (3%)

Query: 325 SESYSKSSISDNKSS-DSTESRSKLSFKWDMLKETSNEAKR---NKKFCVTRISKSKSIS 380
           S   + S + DN+S+ D       ++  +D+       A+    +K+  +   S++ +I+
Sbjct: 278 SRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAIDDYSQAININ 337

Query: 381 VDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
            ++ L+   RGIA+   G    AI+ + Q +  +P   +A   RG       + ++AI D
Sbjct: 338 PNYDLAYCNRGIARSKLGDKQGAINDYTQAININPNDADAYFHRGYNHYHLGDNQSAIDD 397

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           FT+AI+ NP+  +A+  RG   + LG+   AI +  KA +      +    +  +   FK
Sbjct: 398 FTQAIKINPNDADAYFNRGVIHSELGDKQGAIINYRKAADIYKKEGNETQYQNAIKQIFK 457

Query: 498 D 498
           D
Sbjct: 458 D 458



 Score = 47.0 bits (110), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 63/129 (48%)

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y  LG    +  +YK A +   +AI ++ N+ +A+ +       L + + A++   Q + 
Sbjct: 208 YISLGNECFNKKDYKGAIDDWTQAININPNYAKAYFNRGLARYHLGDKQSAIDDWTQAIR 267

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I+  ++  Y+ RGL    LG ++ AI D +  + I+P+       R      +G+ + AI
Sbjct: 268 INPNYADTYYSRGLAHSELGDNQSAIDDYTQAININPNYDLAYRNRGIARSELGDKQGAI 327

Query: 640 KDYDAALDL 648
            DY  A+++
Sbjct: 328 DDYSQAINI 336


>gi|428306482|ref|YP_007143307.1| hypothetical protein Cri9333_2958 [Crinalium epipsammum PCC 9333]
 gi|428248017|gb|AFZ13797.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 342

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 131/294 (44%), Gaps = 38/294 (12%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           +  +F   +G+      +YASAI+ + ++++  P Y EA   RG A    R    AI+ +
Sbjct: 7   VEAEFFFQKGLHLNRIEEYASAIASYGKVVELKPDYAEAWYSRGNALYHLRRYAEAIASY 66

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
            +A++  P   EAW  RG A   L    EAI     A++F+P+     + RGI       
Sbjct: 67  DQALEYRPGFHEAWNNRGNALDDLKHYEEAIASYDNAIKFKPDYFWAWNNRGI------- 119

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
                                      AL ++G Y +A +++ +AI+   N+  AW +  
Sbjct: 120 ---------------------------ALKNLGRYSEAIDSYDRAIEFKPNYYWAWYNRG 152

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
              + +   +KA+  L + L     F +A++ RG+ L  LG  + AI      L + P N
Sbjct: 153 MAMRQIDRLDKAIASLDKALLAKPDFHEAWYHRGIALQNLGLCESAIASFDESLTVQPKN 212

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELD----SMEKFVLQCLAFYQKEI 668
           I+  Y R     ++G Y++AI  +D  L+++ D    + +  VL  L  YQ+ +
Sbjct: 213 IDAWYFRGLALDSLGRYQQAIASFDKTLEIQHDKYALNAKGLVLLKLGRYQEAL 266



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 1/266 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG A  +  +YA AI+ +DQ L+  P + EA   RG A    +  E AI+ +  AI+  
Sbjct: 48  SRGNALYHLRRYAEAIASYDQALEYRPGFHEAWNNRGNALDDLKHYEEAIASYDNAIKFK 107

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG A   LG   EAI    +A+EF+PN     + RG+   +    + A+  
Sbjct: 108 PDYFWAWNNRGIALKNLGRYSEAIDSYDRAIEFKPNYYWAWYNRGMAMRQIDRLDKAIAS 167

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L   +    +   A+ + G+AL ++G  + A  +  +++ +    ++AW         L 
Sbjct: 168 LDKALLAKPDFHEAWYHRGIALQNLGLCESAIASFDESLTVQPKNIDAWYFRGLALDSLG 227

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    + L I +    A + +GL+L  LG++++A+      L I P +   LY +
Sbjct: 228 RYQQAIASFDKTLEI-QHDKYALNAKGLVLLKLGRYQEALISFDKALHIKPDDHTALYNK 286

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
           A CY    +   AIK    A+ L  D
Sbjct: 287 ARCYALQSDADLAIKHLQQAIHLSPD 312


>gi|254412549|ref|ZP_05026323.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196180859|gb|EDX75849.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 884

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 137/316 (43%), Gaps = 17/316 (5%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L R IA    G+   AI+ +D+ L+ +P   +A   RG A      LE AI+ F +A+Q 
Sbjct: 394 LDRSIALRKLGRLEEAIASYDKALQFEPDDHQACYNRGIALRKLGRLEEAIASFDKALQF 453

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   EAW  RG A   LG   EAI    KAL+F+P+     + RGI          A++
Sbjct: 454 KPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDYHQAWYNRGI----------ALD 503

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            L    +       A+   G+AL  +G+ ++A     KA+Q   +  +AW +      DL
Sbjct: 504 KLGRIEEAIASYDQAWYNRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNRGNALFDL 563

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+ +    + L   +   +A++ RG+ L  LGQ ++AI      L   P   +    
Sbjct: 564 GRLEEGIASFDKALQFKRDCHQAWNNRGIALKKLGQLEEAIASYDKALQFKPDLHQAWNN 623

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           R +    +G+  EAI  YD AL  + D  E       A+Y + IAL    ++      +D
Sbjct: 624 RGNALFNLGQLEEAIASYDKALQFKPDDPE-------AWYSRGIALGNLGQLEEAIASYD 676

Query: 685 IDGDIDPLFKEYWCKR 700
                 P   E W  R
Sbjct: 677 KALQFKPDDPEAWYSR 692



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 7/292 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  + G+    I+ FD+ L+      +A   RG A     +LE AI+ + +A+Q  
Sbjct: 555 NRGNALFDLGRLEEGIASFDKALQFKRDCHQAWNNRGIALKKLGQLEEAIASYDKALQFK 614

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   LG+  EAI    KAL+F+P+  +  + RGI          A+  
Sbjct: 615 PDLHQAWNNRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIAS 674

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++   ++  A+   G+AL ++G+ ++A  ++  A+Q   +  EAW +       L 
Sbjct: 675 YDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDNALQFKSDDPEAWYNRGNALDGLG 734

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    + L I   + +A + RG+    LG+ ++AI    + L     + E  Y R
Sbjct: 735 QLKEAIASYDKALQIKPDYHQARYNRGIARRKLGRIEEAIASYDNALKFKTDDHEAWYNR 794

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN 677
               + +G + EAI   + AL+++LD          AFY+K   L   ++I+
Sbjct: 795 GFALYKLGRFEEAIISCNKALEIKLDYAN-------AFYKKACYLALQNQID 839



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 24/293 (8%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA    G+   AI+ FD+ L+  P   EA   RG+A      +E AI+ F +A+Q  
Sbjct: 429 NRGIALRKLGRLEEAIASFDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFK 488

Query: 446 P------------------------SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           P                        S  +AW  RG A   LG+  EAI    KAL+F+ +
Sbjct: 489 PDYHQAWYNRGIALDKLGRIEEAIASYDQAWYNRGIALRKLGQLEEAITCFDKALQFKLD 548

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
                + RG   F        +      ++  ++   A+   G+AL  +G+ ++A  ++ 
Sbjct: 549 DHQAWYNRGNALFDLGRLEEGIASFDKALQFKRDCHQAWNNRGIALKKLGQLEEAIASYD 608

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KA+Q   +  +AW +      +L   E+A+    + L       +A++ RG+ L  LGQ 
Sbjct: 609 KALQFKPDLHQAWNNRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQL 668

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           ++AI      L   P + E  Y R      +G+  EAI  YD AL  + D  E
Sbjct: 669 EEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDNALQFKSDDPE 721



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 133/315 (42%), Gaps = 17/315 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG +Q   G+   AI+ +D+ L+  P Y +A   RG A      LE AI+ +  A+Q  
Sbjct: 327 NRGNSQSKLGRLFKAIASYDKALQFKPDYHQAWYNRGIALRKLGRLEEAIASYDNALQFK 386

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E W  R  A   LG   EAI    KAL+FEP+     + RGI   K      A+  
Sbjct: 387 PEQHEVWLDRSIALRKLGRLEEAIASYDKALQFEPDDHQACYNRGIALRKLGRLEEAIAS 446

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++   +   A+   G AL  +G  ++A  +  KA+Q   ++ +AW           
Sbjct: 447 FDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDYHQAW----------Y 496

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N   AL+ L ++      + +A++ RG+ L  LGQ ++AI      L     + +  Y R
Sbjct: 497 NRGIALDKLGRIEEAIASYDQAWYNRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNR 556

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            +    +G   E I  +D AL  + D  +       A+  + IAL    ++      +D 
Sbjct: 557 GNALFDLGRLEEGIASFDKALQFKRDCHQ-------AWNNRGIALKKLGQLEEAIASYDK 609

Query: 686 DGDIDPLFKEYWCKR 700
                P   + W  R
Sbjct: 610 ALQFKPDLHQAWNNR 624



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 129/299 (43%), Gaps = 7/299 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G+   AI+ FD+ L+      +A   RG A      +E AI+ + +A+Q  
Sbjct: 225 NRGIALRNLGRIEEAIASFDKALQFKRDCHQAWNNRGNALFNLGRIEEAIASYDKALQFK 284

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E W  RG A   LGE  EAI    +AL+F+ +       RG    K      A+  
Sbjct: 285 PDDYETWCNRGYAMDELGEIEEAIASFEQALQFKRDCHQAWKNRGNSQSKLGRLFKAIAS 344

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++   +   A+   G+AL  +G  ++A  ++  A+Q      E W   +   + L 
Sbjct: 345 YDKALQFKPDYHQAWYNRGIALRKLGRLEEAIASYDNALQFKPEQHEVWLDRSIALRKLG 404

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L  +    +A + RG+ L  LG+ ++AI      L   P   E  Y R
Sbjct: 405 RLEEAIASYDKALQFEPDDHQACYNRGIALRKLGRLEEAIASFDKALQFKPDKHEAWYNR 464

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
            S    +G   EAI  +D AL  + D  +       A+Y + IAL    +I      +D
Sbjct: 465 GSALDELGRIEEAIASFDKALQFKPDYHQ-------AWYNRGIALDKLGRIEEAIASYD 516



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 138/334 (41%), Gaps = 10/334 (2%)

Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           K  +  +S+ +    +F L +G  Q   G    AI  +++ L   P    A   RG A  
Sbjct: 175 KLALAELSQGED---EFWLKQGNQQFRLGDLVDAIVCWEKALDITPDSHNAWNNRGIALR 231

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
               +E AI+ F +A+Q      +AW  RG A   LG   EAI    KAL+F+P+  +  
Sbjct: 232 NLGRIEEAIASFDKALQFKRDCHQAWNNRGNALFNLGRIEEAIASYDKALQFKPDDYETW 291

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
             RG    +  +   A+      ++  ++   A+   G + S +G   KA  ++ KA+Q 
Sbjct: 292 CNRGYAMDELGEIEEAIASFEQALQFKRDCHQAWKNRGNSQSKLGRLFKAIASYDKALQF 351

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
             ++ +AW +     + L   E+A+      L       + +  R + L  LG+ ++AI 
Sbjct: 352 KPDYHQAWYNRGIALRKLGRLEEAIASYDNALQFKPEQHEVWLDRSIALRKLGRLEEAIA 411

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
                L  +P + +  Y R      +G   EAI  +D AL  + D  E       A+Y +
Sbjct: 412 SYDKALQFEPDDHQACYNRGIALRKLGRLEEAIASFDKALQFKPDKHE-------AWYNR 464

Query: 667 EIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
             AL    +I      FD      P + + W  R
Sbjct: 465 GSALDELGRIEEAIASFDKALQFKPDYHQAWYNR 498



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 118/260 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G+   AI+ +D+ L+  P   E    RG A     E+E AI+ F +A+Q  
Sbjct: 259 NRGNALFNLGRIEEAIASYDKALQFKPDDYETWCNRGYAMDELGEIEEAIASFEQALQFK 318

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               +AWK RG +++ LG   +AI    KAL+F+P+     + RGI   K      A+  
Sbjct: 319 RDCHQAWKNRGNSQSKLGRLFKAIASYDKALQFKPDYHQAWYNRGIALRKLGRLEEAIAS 378

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++   E    +    +AL  +G  ++A  ++ KA+Q + +  +A  +     + L 
Sbjct: 379 YDNALQFKPEQHEVWLDRSIALRKLGRLEEAIASYDKALQFEPDDHQACYNRGIALRKLG 438

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+    + L       +A++ RG  L  LG+ ++AI      L   P   +  Y R
Sbjct: 439 RLEEAIASFDKALQFKPDKHEAWYNRGSALDELGRIEEAIASFDKALQFKPDYHQAWYNR 498

Query: 626 ASCYHAIGEYREAIKDYDAA 645
                 +G   EAI  YD A
Sbjct: 499 GIALDKLGRIEEAIASYDQA 518



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 105/231 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N G+   AI+ +D+ L+  P  PEA   RG A     +LE AI+ + +A+Q  
Sbjct: 623 NRGNALFNLGQLEEAIASYDKALQFKPDDPEAWYSRGIALGNLGQLEEAIASYDKALQFK 682

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG+  EAI     AL+F+ +  +  + RG           A+  
Sbjct: 683 PDDPEAWYSRGIALGNLGQLEEAIASYDNALQFKSDDPEAWYNRGNALDGLGQLKEAIAS 742

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +   A    G+A   +G  ++A  ++  A++   +  EAW +       L 
Sbjct: 743 YDKALQIKPDYHQARYNRGIARRKLGRIEEAIASYDNALKFKTDDHEAWYNRGFALYKLG 802

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
             E+A+    + L I   ++ A++ +   L    Q   A++ L   + ++P
Sbjct: 803 RFEEAIISCNKALEIKLDYANAFYKKACYLALQNQIDLALEKLQQAITLNP 853



 Score = 43.1 bits (100), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 8/116 (6%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
           NR     +L   +  I   DKALQ  P   QA+  +G A   LGR EEA++ +++ +   
Sbjct: 463 NRGSALDELGRIEEAIASFDKALQFKPDYHQAWYNRGIALDKLGRIEEAIASYDQAW--- 519

Query: 134 LHQSADLKQFLELEELLTAAKQDRSVTCE-----YDVSNSMSSLTVSESGLNANDK 184
            ++   L++  +LEE +T   +      +     Y+  N++  L   E G+ + DK
Sbjct: 520 YNRGIALRKLGQLEEAITCFDKALQFKLDDHQAWYNRGNALFDLGRLEEGIASFDK 575


>gi|145495192|ref|XP_001433589.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400708|emb|CAK66192.1| unnamed protein product [Paramecium tetraurelia]
          Length = 652

 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 150/320 (46%), Gaps = 8/320 (2%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D   ++GI   +  +Y  AI  +D+I+  +P Y  A  G+G       + E AI  + E
Sbjct: 95  FDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIGAWKGKGHTLINLNQYEEAIKCYNE 154

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI  NP    AW  +G A   L +  EAI+  ++A+   PN  D+ + +G        + 
Sbjct: 155 AISINPKHNGAWYNKGIALQNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYE 214

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A++  +  + ++ +   A+   G+ L ++  Y++A E + + I ++  ++ AW      
Sbjct: 215 EAIKCYNQAISINPKYFDAWYNKGITLDNLNYYEEAIECYDEIISINPKYIYAWNGKGNT 274

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            ++L   E+A++C  + + I+      ++ +G  L  L Q+++AIK  +  + I+    +
Sbjct: 275 LRNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIKCYNEAISINHKYFD 334

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-AS 674
             Y +      + +Y+EAI+ YD  + +    +  +      L+ L  Y++ I  Y  A 
Sbjct: 335 AWYNKGITLDDLNQYKEAIECYDEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNQAI 394

Query: 675 KINSEF--CWFDIDGDIDPL 692
            IN ++   W++    +D L
Sbjct: 395 SINPKYFDAWYNKGATLDNL 414



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 135/278 (48%), Gaps = 3/278 (1%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D   ++GI   N   Y  AI  +D+I+  +P Y  A  G+G       + E AI  + E
Sbjct: 231 FDAWYNKGITLDNLNYYEEAIECYDEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNE 290

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI  NP+  + W  +G     L +  EAI+  ++A+       D  + +GI       + 
Sbjct: 291 AISINPNQEDVWNCKGNTLRNLNQYEEAIKCYNEAISINHKYFDAWYNKGITLDDLNQYK 350

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+E     + ++ +   A+   G  L ++ +Y++A + + +AI ++  + +AW +    
Sbjct: 351 EAIECYDEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGAT 410

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
             +L   E+A+EC  +++ I+++F  A++ +G  L  L Q+++AIK  +  + I+    +
Sbjct: 411 LDNLNQYEEAIECYDEIISINQKFIHAWNGKGNTLRKLNQYEEAIKCYNEAISINHKYFD 470

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLE---LDSMEK 655
               +      + +Y EAIK Y+ A+ ++     SME+
Sbjct: 471 AWNNKGISLQNLNQYEEAIKCYNEAISIKPQMCSSMEQ 508



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 138/301 (45%), Gaps = 6/301 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G    N  +Y  AI  ++Q +  +P Y +A   +G         E AI  + E I  NP
Sbjct: 203 KGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGITLDNLNYYEEAIECYDEIISINP 262

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  +G     L +  EAI+  ++A+   PN  D+ + +G        +  A++  
Sbjct: 263 KYIYAWNGKGNTLRNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIKCY 322

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + ++ +   A+   G+ L  + +YK+A E + + I ++  ++ AW       ++L  
Sbjct: 323 NEAISINHKYFDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIYAWNGKGNTLRNLNQ 382

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A++C  Q + I+ ++  A++ +G  L  L Q+++AI+     + I+   I     + 
Sbjct: 383 YEEAIKCYNQAISINPKYFDAWYNKGATLDNLNQYEEAIECYDEIISINQKFIHAWNGKG 442

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-ASKINSEF 680
           +    + +Y EAIK Y+ A+ +     + +      LQ L  Y++ I  Y  A  I  + 
Sbjct: 443 NTLRKLNQYEEAIKCYNEAISINHKYFDAWNNKGISLQNLNQYEEAIKCYNEAISIKPQM 502

Query: 681 C 681
           C
Sbjct: 503 C 503



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 64/305 (20%), Positives = 138/305 (45%), Gaps = 38/305 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G   +N  +Y  AI  +++ +  +P +  A   +G A     + E AI  + EAI  NP
Sbjct: 135 KGHTLINLNQYEEAIKCYNEAISINPKHNGAWYNKGIALQNLNQYEEAIKCYNEAISINP 194

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI--------------- 491
           +  + W  +G     L +  EAI+  ++A+   P   D  + +GI               
Sbjct: 195 NQEDVWNCKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGITLDNLNYYEEAIECY 254

Query: 492 -----VNFKF--------------KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
                +N K+                +  A++  +  + ++   +  +   G  L ++ +
Sbjct: 255 DEIISINPKYIYAWNGKGNTLRNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQ 314

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           Y++A + + +AI ++  + +AW +      DL   ++A+EC  +++ I+ ++  A++ +G
Sbjct: 315 YEEAIKCYNEAISINHKYFDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIYAWNGKG 374

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
             L  L Q+++AIK  +  + I+P   +  Y + +    + +Y EAI+ YD  + +    
Sbjct: 375 NTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGATLDNLNQYEEAIECYDEIISIN--- 431

Query: 653 MEKFV 657
            +KF+
Sbjct: 432 -QKFI 435



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 147/312 (47%), Gaps = 9/312 (2%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           I+  N  +Y  AI  +++ +  +P Y +A   +G  R    + E AI  + EAI  N   
Sbjct: 36  ISLENLNQYEEAIKCYNEAVSMNPKYFQAWNNKGNLRNL-NQYEEAIKCYNEAISINHKY 94

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +AW  +G     L +  EAI+   + +   P        +G        +  A++  + 
Sbjct: 95  FDAWYNKGITLDDLNQYKEAIECYDEIISINPKYIGAWKGKGHTLINLNQYEEAIKCYNE 154

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + ++ ++  A+   G+AL ++ +Y++A + + +AI ++ N  + W       ++L   E
Sbjct: 155 AISINPKHNGAWYNKGIALQNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYE 214

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A++C  Q + I+ ++  A++ +G+ L  L  +++AI+     + I+P  I     + + 
Sbjct: 215 EAIKCYNQAISINPKYFDAWYNKGITLDNLNYYEEAIECYDEIISINPKYIYAWNGKGNT 274

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-ASKINSEF-- 680
              + +Y EAIK Y+ A+ +  +  + +      L+ L  Y++ I  Y  A  IN ++  
Sbjct: 275 LRNLNQYEEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIKCYNEAISINHKYFD 334

Query: 681 CWFDIDGDIDPL 692
            W++    +D L
Sbjct: 335 AWYNKGITLDDL 346



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 121/261 (46%), Gaps = 9/261 (3%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQ--------RELEAAISDFTEAIQSNPS 447
           +Y  AI  +D+ L  +P Y +AL  +G  +            + E AI  + EA+  NP 
Sbjct: 1   QYQVAIECYDEALSINPQYFKALNNKGNLKNLNLGISLENLNQYEEAIKCYNEAVSMNPK 60

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +AW  +G  R  L +  EAI+  ++A+       D  + +GI       +  A+E   
Sbjct: 61  YFQAWNNKGNLR-NLNQYEEAIKCYNEAISINHKYFDAWYNKGITLDDLNQYKEAIECYD 119

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + ++ +   A+   G  L ++ +Y++A + + +AI ++     AW +     Q+L   
Sbjct: 120 EIISINPKYIGAWKGKGHTLINLNQYEEAIKCYNEAISINPKHNGAWYNKGIALQNLNQY 179

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+A++C  + + I+      ++ +G  L  L Q+++AIK  +  + I+P   +  Y +  
Sbjct: 180 EEAIKCYNEAISINPNQEDVWNCKGNTLRNLNQYEEAIKCYNQAISINPKYFDAWYNKGI 239

Query: 628 CYHAIGEYREAIKDYDAALDL 648
               +  Y EAI+ YD  + +
Sbjct: 240 TLDNLNYYEEAIECYDEIISI 260


>gi|430741335|ref|YP_007200464.1| hypothetical protein Sinac_0326 [Singulisphaera acidiphila DSM
           18658]
 gi|430013055|gb|AGA24769.1| tetratricopeptide repeat protein [Singulisphaera acidiphila DSM
           18658]
          Length = 779

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 144/313 (46%), Gaps = 15/313 (4%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG A   +  Y   I+ +++ ++ DP        R  A + + + +  I+D+ EAI+ 
Sbjct: 211 FNRGYAWSKKKDYDKTIADYNEAIRLDPDDAPTYFNRAHAWSQKEDYDKTIADYNEAIRL 270

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+  RG A +  G+  +AI D ++ +  +P +      RG    +  D + A+ 
Sbjct: 271 DPDDASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIA 330

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++LD  + SAY   G A    GE+ KA     +AI+LD     A+ + +  + + 
Sbjct: 331 DFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEK 390

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              +KA+    +++ +D + + AY  RG       +H KAI D +  + +DP+N      
Sbjct: 391 EEYDKAIADANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRLDPTNAWAYLN 450

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE------------IAL-- 670
           R   +    E+ +AI D++ A+ L+  +   +  +  A+ QKE            I L  
Sbjct: 451 RGYAWDEKEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQLDP 510

Query: 671 -YTASKINSEFCW 682
            YT++ +N  + W
Sbjct: 511 NYTSAYLNRGYAW 523



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 4/285 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG A   +G    AI+ +++ ++ DP    A   RG A   + +L+ AI+DF EAI+ 
Sbjct: 279 FNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRL 338

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+   A+  +G A    GE  +AI D ++A+  +P +      R     + ++++ A+ 
Sbjct: 339 DPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEKEEYDKAIA 398

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY--Q 562
           D +  ++LD +N  AY   G A     E+ KA     +AI+LD     AW +L + Y   
Sbjct: 399 DANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRLDP--TNAWAYLNRGYAWD 456

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +    +KA+    + + +D   + AY  RG        + KAI D +  + +DP+     
Sbjct: 457 EKEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAY 516

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
             R   +    +Y +AI D++ A+ L+  +   +  +  A+ QKE
Sbjct: 517 LNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQKE 561



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 126/265 (47%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+R  A   + +Y  AI+  ++I++ DP    A   RG A   ++E + AI+D  EAI+ 
Sbjct: 381 LNRSHAWSEKEEYDKAIADANEIIRLDPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRL 440

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+   A+  RG A     E  +AI D +KA+  +P +      RG    + +D++ A+ 
Sbjct: 441 DPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIA 500

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++LD    SAY   G A S   +Y KA     KAI+LD     A+ +    +   
Sbjct: 501 DFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQK 560

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              +KA+    + + +D   + AY  RG       +H KAI D +  + IDP        
Sbjct: 561 EGYDKAIADYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADYNEAIRIDPKAANAYIY 620

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           RA  +    +Y +AI D+  A+ ++
Sbjct: 621 RAITWSRKKDYDKAITDFTEAIRID 645



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 138/283 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +++G A   +G++  AI+ F++ ++ DP    A + R  A + + E + AI+D  E I+ 
Sbjct: 347 VNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRSHAWSEKEEYDKAIADANEIIRL 406

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+ +RG A     E  +AI D ++A+  +P +A     RG    + ++ + A+ 
Sbjct: 407 DPQNAWAYFKRGYAWGKKKEHDKAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAIT 466

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++LD  N  AY   G A     +Y KA     +AIQLD N+  A+ +    +   
Sbjct: 467 DFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQK 526

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + +KA+    + + +D   + AY  RG        + KAI D +  + +DP+N      
Sbjct: 527 NDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQKEGYDKAIADYNEAIRLDPNNALAYLN 586

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           R        E+ +AI DY+ A+ ++  +   ++ + + + +K+
Sbjct: 587 RGHARSKTQEHDKAIADYNEAIRIDPKAANAYIYRAITWSRKK 629



 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 137/283 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG A     +Y  AI+ +++ ++ DP    A   RG A + + + + AI+D+ EAI+ 
Sbjct: 143 FNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGYAWSQKNDYDKAITDYNEAIRL 202

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+  RG A +   +  + I D ++A+  +P+ A     R     + +D++  + 
Sbjct: 203 DPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDAPTYFNRAHAWSQKEDYDKTIA 262

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++LD ++ SAY   G A S  G+  KA   + + I+LD     A+ +    +   
Sbjct: 263 DYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNETIRLDPTNTPAYFNRGYAWNQK 322

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + +KA+    + + +D   + AY  +G      G+H KAI D +  + +DP+N      
Sbjct: 323 GDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLN 382

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           R+  +    EY +AI D +  + L+  +   +  +  A+ +K+
Sbjct: 383 RSHAWSEKEEYDKAIADANEIIRLDPQNAWAYFKRGYAWGKKK 425



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 6/267 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG A   + ++  AI+  ++ ++ DP    A + RG A   + E + AI+DF +AI+ 
Sbjct: 415 FKRGYAWGKKKEHDKAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRL 474

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+   A+  RG A     +  +AI D ++A++ +PN       RG    +  D++ A+ 
Sbjct: 475 DPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIA 534

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFY 561
           D +  ++LD  N  AY   G A S    Y KA   + +AI+LD N   A+   GH     
Sbjct: 535 DFNKAIRLDPINAPAYFNRGHAWSQKEGYDKAIADYNEAIRLDPNNALAYLNRGHARSKT 594

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           Q+    +KA+    + + ID + + AY  R +       + KAI D +  + IDP +   
Sbjct: 595 QE---HDKAIADYNEAIRIDPKAANAYIYRAITWSRKKDYDKAITDFTEAIRIDPKDASS 651

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
              R   +    +Y +AI DY+ A+ L
Sbjct: 652 HSNRGYAWSKKKDYAKAIADYNEAIQL 678



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 132/267 (49%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I+ +D+ ++ +P    A   RG A + ++E + AI+D+ EAI+ +P    A+  RG A +
Sbjct: 125 IAEYDEAIRLNPNDASAYFNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGYAWS 184

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
              +  +AI D ++A+  +P+ A     RG    K KD++  + D +  ++LD ++   Y
Sbjct: 185 QKNDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDAPTY 244

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
                A S   +Y K    + +AI+LD +   A+ +    +    + +KA+    + + +
Sbjct: 245 FNRAHAWSQKEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNETIRL 304

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           D   + AY  RG   +  G   KAI D    + +DP++      +   +   GE+ +AI 
Sbjct: 305 DPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIA 364

Query: 641 DYDAALDLELDSMEKFVLQCLAFYQKE 667
           D++ A+ L+  +   ++ +  A+ +KE
Sbjct: 365 DFNEAIRLDPTNTWAYLNRSHAWSEKE 391



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 115/235 (48%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E  I+++ EAI+ NP+   A+  RG A +   E  +AI D ++A+  +P      H RG 
Sbjct: 122 EEDIAEYDEAIRLNPNDASAYFNRGYAWSERQEYDKAIADYNEAIRLDPQLTLAYHNRGY 181

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
              +  D++ A+ D +  ++LD ++ SAY   G A S   +Y K    + +AI+LD +  
Sbjct: 182 AWSQKNDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIRLDPDDA 241

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
             + +    +    + +K +    + + +D   + AY  RG      G   KAI D +  
Sbjct: 242 PTYFNRAHAWSQKEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIADYNET 301

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           + +DP+N    + R   ++  G+  +AI D+D A+ L+ +    +V Q  A+ +K
Sbjct: 302 IRLDPTNTPAYFNRGYAWNQKGDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEK 356



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 116/232 (50%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG A   + ++  AI+ F++ ++ DP    A   RG A   + + + AI+DF EAIQ 
Sbjct: 449 LNRGYAWDEKEEHDKAITDFNKAIRLDPTNTWAYFNRGYAWGQKEDYDKAIADFNEAIQL 508

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+   A+  RG A +   +  +AI D +KA+  +P +A     RG    + + ++ A+ 
Sbjct: 509 DPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAWSQKEGYDKAIA 568

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++LD  N  AY   G A S   E+ KA   + +AI++D     A+ +    +   
Sbjct: 569 DYNEAIRLDPNNALAYLNRGHARSKTQEHDKAIADYNEAIRIDPKAANAYIYRAITWSRK 628

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
            + +KA+    + + ID + + ++  RG        + KAI D +  + ++P
Sbjct: 629 KDYDKAITDFTEAIRIDPKDASSHSNRGYAWSKKKDYAKAIADYNEAIQLNP 680



 Score = 46.2 bits (108), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 15/114 (13%)

Query: 18  KTICEIDELVRVDSVMASAITARI-------ELAKLCSLRNWSKAIRILDSLLAQSYEIQ 70
           KTI + +E +R+D   ASA   R        +L K  ++ ++++ IR LD     +Y   
Sbjct: 259 KTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDK--AIADYNETIR-LDPTNTPAY--- 312

Query: 71  DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
              NR + ++Q       I D D+A++LDP    AY+ +GCA+   G  ++A++
Sbjct: 313 --FNRGYAWNQKGDLDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIA 364



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 11/116 (9%)

Query: 14  NKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSYE 68
           N   K I + +E +R+D   ASA   R    +K      ++ ++++AIR LD   A +Y 
Sbjct: 187 NDYDKAITDYNEAIRLDPDDASAYFNRGYAWSKKKDYDKTIADYNEAIR-LDPDDAPTY- 244

Query: 69  IQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
                NRA  +SQ E +   I D ++A++LDP    AY  +G A+S  G  ++A++
Sbjct: 245 ----FNRAHAWSQKEDYDKTIADYNEAIRLDPDDASAYFNRGHAWSQKGDLDKAIA 296



 Score = 44.3 bits (103), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 11/117 (9%)

Query: 18  KTICEIDELVRVDSVMASAITAR-----IELAKLCSLRNWSKAIRILDSLLAQSYEIQDI 72
           K I + +E +R+D   A A   R      +     ++ +++KAIR LD     +Y     
Sbjct: 429 KAIADDNEAIRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIR-LDPTNTWAY----- 482

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
            NR + + Q E +   I D ++A+QLDP    AY+ +G A+S     ++A++ + K 
Sbjct: 483 FNRGYAWGQKEDYDKAIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKA 539


>gi|334365803|ref|ZP_08514752.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
 gi|313157909|gb|EFR57315.1| tetratricopeptide repeat protein [Alistipes sp. HGB5]
          Length = 657

 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 122/273 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA+ N      A + F   ++ +P+Y +A   R   R+     + A+ DF EAI+  P
Sbjct: 61  RGIAKYNLNDLLGAEADFSTAIRMNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 120

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG  R    +  EAI D  K +  E   AD    RG+     KD   A ++ 
Sbjct: 121 DLPGPYYSRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNF 180

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++ ++EN + Y   G        Y +AE    KAI+ D  +L ++ +    Y +   
Sbjct: 181 NTAIRTNRENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNR 240

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              AL    +V+ +D   S  Y  R +L   +G + +A++D        P+N+   Y RA
Sbjct: 241 PMLALSDFDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRA 300

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
             Y  +GE  +A +DY +A+ L  D    ++ +
Sbjct: 301 GVYAQLGEIEKAAEDYTSAIKLYPDFANAYIYR 333



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 14/254 (5%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI   + +L+ D    E    RG A+    +L  A +DF+ AI+ NP   +A+  R 
Sbjct: 37  YQEAIRTLNTLLRFDENAFEGYFLRGIAKYNLNDLLGAEADFSTAIRMNPVYTQAYTYRA 96

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
             R+ LG   +A+QD  +A+E  P+     + RG+     + F  A++D    ++ + + 
Sbjct: 97  ITRSRLGNYDDALQDFREAIELRPDLPGPYYSRGVTRLLNQQFTEAIDDFDKFIRQENKV 156

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL-------ANSEK 569
             A+   GL+   + +  +A +    AI+ +R     +      Y +        A+  K
Sbjct: 157 ADAFICRGLSYLHLKDTVRAYDNFNTAIRTNRENPNGYNRRGGLYMEQKRYPEAEADFNK 216

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A+EC       D  +  +Y  R L+     +   A+ D    + +D +N    + RA   
Sbjct: 217 AIEC-------DSTYLLSYFNRALVYSNTNRPMLALSDFDKVIQLDSTNSLTYFNRAMLR 269

Query: 630 HAIGEYREAIKDYD 643
             IG+Y  A++DYD
Sbjct: 270 TQIGDYNRALEDYD 283



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 31/159 (19%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
             RG++Q    +Y +A++ F   ++ +P  P   + R T RA            +QR   
Sbjct: 482 FERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 541

Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
                             + A++D  +AI+  P    ++  R   RA  G   EA +D +
Sbjct: 542 DSDPANRLNNNSKRTYSYDEAVADLNKAIKLFPDLAYSYYNRANLRALSGSLPEAFEDYT 601

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
           KA+E  PN A+  + RGI+    KD      D+S   +L
Sbjct: 602 KAIELNPNFAEAYYNRGIIQIFMKDTRKGCLDISKAGEL 640



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 37/228 (16%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+ ++   ++  AI  FD+ ++++    +A I RG +    ++   A  +F  AI++N
Sbjct: 128 SRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNFNTAIRTN 187

Query: 446 PSAGEAWKRRG----------QARAALGESVE------------------------AIQD 471
                 + RRG          +A A   +++E                        A+ D
Sbjct: 188 RENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNRPMLALSD 247

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             K ++ +  ++     R ++  +  D+N A+ED          N   Y       + +G
Sbjct: 248 FDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRAGVYAQLG 307

Query: 532 EYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQ 576
           E +KA E +  AI+L  +F  A+   G L +  +D   ++K  +  Q+
Sbjct: 308 EIEKAAEDYTSAIKLYPDFANAYIYRGRLRELLRDPQGAKKDRDTAQK 355



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 10/152 (6%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
            L  RG ++A  ++   A++ F+ AI+ NPS    +  R   RA + + + +I +  + +
Sbjct: 480 VLFERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 539

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-LSSI-GEYK 534
             + + A+ L+      + + +   AV DL+  +KL  +   AY+Y   A L ++ G   
Sbjct: 540 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAIKLFPD--LAYSYYNRANLRALSGSLP 594

Query: 535 KAEEAHLKAIQLDRNFLEAW---GHLTQFYQD 563
           +A E + KAI+L+ NF EA+   G +  F +D
Sbjct: 595 EAFEDYTKAIELNPNFAEAYYNRGIIQIFMKD 626


>gi|254413092|ref|ZP_05026864.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196180256|gb|EDX75248.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 1179

 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 146/317 (46%), Gaps = 10/317 (3%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A         A + F Q+L+ +P   +   GRG A +  +  E AI  F +AI+ N 
Sbjct: 80  RGMAYRGLKLEEPATADFYQVLQREPHTYQDWRGRGLALSELKRYEEAIVSFDKAIEINS 139

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  RG A   LG+   AI    KALE  P+   I   RG+       +  A+   
Sbjct: 140 DYYYAWNGRGLALDELGKYENAIASYDKALEINPDDYKIWGNRGLALNNLGKYEDAIASY 199

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD-LA 565
              ++++  N  A+   GLAL+++G+Y+ A  ++ KAI+++     +W  L  F  D L 
Sbjct: 200 DKAIEINPNNYKAWGKRGLALNNLGKYEDAIASYDKAIEINPGEYGSW-ILRSFALDKLE 258

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+ +  L Q L I+     A++ R + L  LG+H++AI      + I+P +      +
Sbjct: 259 KYEEVVTSLDQALKINSHEYYAWNRRAIGLDKLGKHEEAIASYDKAIKINPDDYTAWRNK 318

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT-ASKINSE 679
               H +G+Y EAI   D AL +  D     +L+  A      Y + +A Y  A +IN +
Sbjct: 319 GFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDKLGKYSEALASYNQAIQINPD 378

Query: 680 --FCWFDIDGDIDPLFK 694
               W +    +D L K
Sbjct: 379 DYTAWINRGSALDKLGK 395



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 6/299 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  N GKY  AI+ +D+ ++ +P    + I R  A     + E  ++   +A++ N 
Sbjct: 216 RGLALNNLGKYEDAIASYDKAIEINPGEYGSWILRSFALDKLEKYEEVVTSLDQALKINS 275

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW RR      LG+  EAI    KA++  P+       +G V  K   +  A+  L
Sbjct: 276 HEYYAWNRRAIGLDKLGKHEEAIASYDKAIKINPDDYTAWRNKGFVLHKLGKYEEAISSL 335

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +K++ +        G AL  +G+Y +A  ++ +AIQ++ +   AW +       L  
Sbjct: 336 DQALKINPDQYYFCILRGCALDKLGKYSEALASYNQAIQINPDDYTAWINRGSALDKLGK 395

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +AL    Q L I+     A++LRG  L+ LG++++AI      + I+  +      R 
Sbjct: 396 YSEALASYNQALEINSDEYSAWNLRGKTLNNLGKYEEAITSFDKVIEINSDDYTAWVNRG 455

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKINSE 679
              + +G+Y +A+  YD AL++  +    +      L  L  Y+K +A Y  A +IN +
Sbjct: 456 LALNELGKYEKALASYDKALEINPNEYYTWNNQGNALFNLGKYEKALASYDKALEINPD 514



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 124/266 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G      GKY  AIS  DQ LK +P      I RG A     +   A++ + +AIQ N
Sbjct: 317 NKGFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDKLGKYSEALASYNQAIQIN 376

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  RG A   LG+  EA+   ++ALE   +     + RG        +  A+  
Sbjct: 377 PDDYTAWINRGSALDKLGKYSEALASYNQALEINSDEYSAWNLRGKTLNNLGKYEEAITS 436

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++++ ++ +A+   GLAL+ +G+Y+KA  ++ KA++++ N    W +      +L 
Sbjct: 437 FDKVIEINSDDYTAWVNRGLALNELGKYEKALASYDKALEINPNEYYTWNNQGNALFNLG 496

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             EKAL    + L I+       + R  +L  LG++ + I      + I+P        R
Sbjct: 497 KYEKALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSCDQAIEINPDYYMAWSNR 556

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
               + +G+Y EA+   + A+++  D
Sbjct: 557 GFGLYNLGQYEEALASCNKAIEINPD 582



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 10/303 (3%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +G  Q++ G+   A+ IF Q  + +P  P+ L G G A     + + ++   T+ +  
Sbjct: 10  LQQGHEQLDRGQNQEALQIFQQAEQREPENPQVLFGLGLACYRLEQYQESVDYLTKTLDI 69

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG A   L     A  D  + L+ EP++      RG+   + K +  A+ 
Sbjct: 70  EPCYILALAYRGMAYRGLKLEEPATADFYQVLQREPHTYQDWRGRGLALSELKRYEEAIV 129

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++++ +   A+   GLAL  +G+Y+ A  ++ KA++++ +  + WG+      +L
Sbjct: 130 SFDKAIEINSDYYYAWNGRGLALDELGKYENAIASYDKALEINPDDYKIWGNRGLALNNL 189

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E A+    + + I+    KA+  RGL L+ LG+++ AI      + I+P       L
Sbjct: 190 GKYEDAIASYDKAIEINPNNYKAWGKRGLALNNLGKYEDAIASYDKAIEINPGEYGSWIL 249

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFV-------LQCLAFYQKEIALY-TASKI 676
           R+     + +Y E +   D A  L+++S E +        L  L  +++ IA Y  A KI
Sbjct: 250 RSFALDKLEKYEEVVTSLDQA--LKINSHEYYAWNRRAIGLDKLGKHEEAIASYDKAIKI 307

Query: 677 NSE 679
           N +
Sbjct: 308 NPD 310



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/307 (23%), Positives = 141/307 (45%), Gaps = 14/307 (4%)

Query: 362 AKRNKKFCVTRISKSKS----------ISVD---FRLSRGIAQVNEGKYASAISIFDQIL 408
           A RNK F + ++ K +           I+ D   F + RG A    GKY+ A++ ++Q +
Sbjct: 314 AWRNKGFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDKLGKYSEALASYNQAI 373

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           + +P    A I RG+A     +   A++ + +A++ N     AW  RG+    LG+  EA
Sbjct: 374 QINPDDYTAWINRGSALDKLGKYSEALASYNQALEINSDEYSAWNLRGKTLNNLGKYEEA 433

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I    K +E   +       RG+   +   +  A+      ++++      +   G AL 
Sbjct: 434 ITSFDKVIEINSDDYTAWVNRGLALNELGKYEKALASYDKALEINPNEYYTWNNQGNALF 493

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           ++G+Y+KA  ++ KA++++ +      + +    +L    + +    Q + I+  +  A+
Sbjct: 494 NLGKYEKALASYDKALEINPDGYTVLNNRSGVLCNLGKYSEMITSCDQAIEINPDYYMAW 553

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY-DAALD 647
             RG  L+ LGQ+++A+   +  + I+P        R      +  Y++A K++ D   +
Sbjct: 554 SNRGFGLYNLGQYEEALASCNKAIEINPDYYMAWSNRGWALFKLKRYQKAFKNWKDGIKN 613

Query: 648 LELDSME 654
           L LD+ E
Sbjct: 614 LNLDTPE 620



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 25/196 (12%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRI-LDSLLAQ 65
           +L K  + +  +D+ ++++S    A   R I L KL     ++ ++ KAI+I  D   A 
Sbjct: 256 KLEKYEEVVTSLDQALKINSHEYYAWNRRAIGLDKLGKHEEAIASYDKAIKINPDDYTAW 315

Query: 66  SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
                   N+ F   +L  ++  I   D+AL+++P      IL+GCA   LG+  EAL+ 
Sbjct: 316 R-------NKGFVLHKLGKYEEAISSLDQALKINPDQYYFCILRGCALDKLGKYSEALAS 368

Query: 126 WEKG-------YEHALHQSADLKQFLELEELLTAAKQDRSVTC-EYDVSN----SMSSLT 173
           + +        Y   +++ + L +  +  E L +  Q   +   EY   N    ++++L 
Sbjct: 369 YNQAIQINPDDYTAWINRGSALDKLGKYSEALASYNQALEINSDEYSAWNLRGKTLNNLG 428

Query: 174 VSESGLNANDKMSETS 189
             E  + + DK+ E +
Sbjct: 429 KYEEAITSFDKVIEIN 444



 Score = 40.8 bits (94), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 11/127 (8%)

Query: 8   DSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSY 67
           ++ + L K  K +   D+ + ++    + +  R  +  LC+L  +S+ I   D    Q+ 
Sbjct: 490 NALFNLGKYEKALASYDKALEINPDGYTVLNNRSGV--LCNLGKYSEMITSCD----QAI 543

Query: 68  EIQD-----ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
           EI         NR F    L  ++  +  C+KA++++P    A+  +G A   L R ++A
Sbjct: 544 EINPDYYMAWSNRGFGLYNLGQYEEALASCNKAIEINPDYYMAWSNRGWALFKLKRYQKA 603

Query: 123 LSVWEKG 129
              W+ G
Sbjct: 604 FKNWKDG 610


>gi|397780661|ref|YP_006545133.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
 gi|396939163|emb|CCJ36418.1| TPR repeat-containing protein MJ1345 [Methanoculleus bourgensis
           MS2]
          Length = 627

 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 137/317 (43%), Gaps = 7/317 (2%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D  L+RG A  N G+   A++ +D+++  +P   EA + RGT  A  R  +AAI  +  
Sbjct: 188 ADAWLTRGHAFRNMGRTTDALACYDRVVTIEPGRIEAWLARGTVLAVDRRYDAAIDCYDR 247

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            I  +P    AW  RG  +  L    +A+    +AL  +   AD    RG      K + 
Sbjct: 248 VIALDPGNANAWYARGTIQVLLSRYGDALDSYDQALAIDSGHADTWSTRGRTLATLKRYE 307

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            AV      + +   +       GLAL ++  Y++A + + +A + + +    W H    
Sbjct: 308 EAVRSFDRALAVRPGDAETLYNRGLALQNLERYEEAIDCYDRAFRTNPDLAGIWYHKAMA 367

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            + L   + AL C  + L  +    + +H +GL+L  L +++KAI+     L +   +  
Sbjct: 368 LKRLKRYDLALICFDRALRENAIDPEIWHRKGLVLFNLKRYEKAIECFDQALRLRADHPG 427

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEF 680
             Y R   Y+A+G Y  A+ +Y   +    ++        +A+     ALY   +     
Sbjct: 428 ACYYRGESYYALGNYEAAVANYQTVVRATPENA-------VAWNNYGNALYRLERYEETL 480

Query: 681 CWFDIDGDIDPLFKEYW 697
             ++   +IDP+ +  W
Sbjct: 481 VCYERALEIDPVNRGVW 497



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 137/332 (41%), Gaps = 7/332 (2%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R+   +   ++  L+RG     + +Y +AI  +D+++  DP    A   RGT +   
Sbjct: 210 CYDRVVTIEPGRIEAWLARGTVLAVDRRYDAAIDCYDRVIALDPGNANAWYARGTIQVLL 269

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
                A+  + +A+  +    + W  RG+  A L    EA++   +AL   P  A+ L+ 
Sbjct: 270 SRYGDALDSYDQALAIDSGHADTWSTRGRTLATLKRYEEAVRSFDRALAVRPGDAETLYN 329

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG+     + +  A++      + + +    + +  +AL  +  Y  A     +A++ + 
Sbjct: 330 RGLALQNLERYEEAIDCYDRAFRTNPDLAGIWYHKAMALKRLKRYDLALICFDRALRENA 389

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              E W        +L   EKA+EC  Q L +      A + RG   + LG ++ A+ + 
Sbjct: 390 IDPEIWHRKGLVLFNLKRYEKAIECFDQALRLRADHPGACYYRGESYYALGNYEAAVANY 449

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
            + +   P N        +  + +  Y E +  Y+ A  LE+D + + V        K  
Sbjct: 450 QTVVRATPENAVAWNNYGNALYRLERYEETLVCYERA--LEIDPVNRGVWN-----NKAN 502

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            L   S  +     +D +   +P   + WCK+
Sbjct: 503 VLSILSHYDKALVCYDQELRANPGNADAWCKK 534



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 117/261 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N  +Y  AI  +D+  + +P        +  A    +  + A+  F  A++ N
Sbjct: 329 NRGLALQNLERYEEAIDCYDRAFRTNPDLAGIWYHKAMALKRLKRYDLALICFDRALREN 388

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               E W R+G     L    +AI+   +AL    +     + RG   +   ++ AAV +
Sbjct: 389 AIDPEIWHRKGLVLFNLKRYEKAIECFDQALRLRADHPGACYYRGESYYALGNYEAAVAN 448

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               V+   EN  A+   G AL  +  Y++    + +A+++D      W +       L+
Sbjct: 449 YQTVVRATPENAVAWNNYGNALYRLERYEETLVCYERALEIDPVNRGVWNNKANVLSILS 508

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + +KAL C  Q L  +   + A+  +GL L  LG++ +A+   +  L  DP+ +E   ++
Sbjct: 509 HYDKALVCYDQELRANPGNADAWCKKGLALFILGRYGEAVTCYARALEADPAKVEIWSMK 568

Query: 626 ASCYHAIGEYREAIKDYDAAL 646
            +    +    EA++ Y+ AL
Sbjct: 569 GNALVIMERSEEALECYNRAL 589



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 111/274 (40%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG       +Y  A+  FD+ L   P   E L  RG A       E AI  +  A ++N
Sbjct: 295 TRGRTLATLKRYEEAVRSFDRALAVRPGDAETLYNRGLALQNLERYEEAIDCYDRAFRTN 354

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     W  +  A   L     A+    +AL       +I H +G+V F  K +  A+E 
Sbjct: 355 PDLAGIWYHKAMALKRLKRYDLALICFDRALRENAIDPEIWHRKGLVLFNLKRYEKAIEC 414

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L  ++  A  Y G +  ++G Y+ A   +   ++       AW +       L 
Sbjct: 415 FDQALRLRADHPGACYYRGESYYALGNYEAAVANYQTVVRATPENAVAWNNYGNALYRLE 474

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+ L C ++ L ID      ++ +  +L  L  + KA+      L  +P N +    +
Sbjct: 475 RYEETLVCYERALEIDPVNRGVWNNKANVLSILSHYDKALVCYDQELRANPGNADAWCKK 534

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
                 +G Y EA+  Y  AL+ +   +E + ++
Sbjct: 535 GLALFILGRYGEAVTCYARALEADPAKVEIWSMK 568



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 5/249 (2%)

Query: 363 KRNKKF-----CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
           KR K++     C  R  +  +I  +    +G+   N  +Y  AI  FDQ L+    +P A
Sbjct: 369 KRLKRYDLALICFDRALRENAIDPEIWHRKGLVLFNLKRYEKAIECFDQALRLRADHPGA 428

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
              RG +       EAA++++   +++ P    AW   G A   L    E +    +ALE
Sbjct: 429 CYYRGESYYALGNYEAAVANYQTVVRATPENAVAWNNYGNALYRLERYEETLVCYERALE 488

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
            +P +  + + +  V      ++ A+      ++ +  N  A+   GLAL  +G Y +A 
Sbjct: 489 IDPVNRGVWNNKANVLSILSHYDKALVCYDQELRANPGNADAWCKKGLALFILGRYGEAV 548

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
             + +A++ D   +E W         +  SE+ALEC  + L  +   + A     + L  
Sbjct: 549 TCYARALEADPAKVEIWSMKGNALVIMERSEEALECYNRALAANPDDADALRGMTMALIS 608

Query: 598 LGQHKKAIK 606
           L +  +A+K
Sbjct: 609 LDRSAEAVK 617



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 117/281 (41%), Gaps = 5/281 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A   FDQ ++ DP        RG A    +  + A     +A++  P   +AW  R
Sbjct: 135 RYREAAECFDQGIRIDPDCVRLWAARGQALYRLQHYQEAAEYCGQAVKLAPDCADAWLTR 194

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   +G + +A+    + +  EP   +    RG V    + ++AA++     + LD  
Sbjct: 195 GHAFRNMGRTTDALACYDRVVTIEPGRIEAWLARGTVLAVDRRYDAAIDCYDRVIALDPG 254

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           N +A+   G     +  Y  A +++ +A+ +D    + W    +    L   E+A+    
Sbjct: 255 NANAWYARGTIQVLLSRYGDALDSYDQALAIDSGHADTWSTRGRTLATLKRYEEAVRSFD 314

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + L +    ++  + RGL L  L ++++AI         +P      Y +A     +  Y
Sbjct: 315 RALAVRPGDAETLYNRGLALQNLERYEEAIDCYDRAFRTNPDLAGIWYHKAMALKRLKRY 374

Query: 636 REAIKDYDAAL-----DLELDSMEKFVLQCLAFYQKEIALY 671
             A+  +D AL     D E+   +  VL  L  Y+K I  +
Sbjct: 375 DLALICFDRALRENAIDPEIWHRKGLVLFNLKRYEKAIECF 415



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 94/202 (46%)

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           + E W R+G+A    G+   AI+   +AL+   N+A   + +G V      +  A E   
Sbjct: 85  SAEDWCRKGRAYGERGQYDRAIECYDRALKLNANAATAWYHKGRVLNTACRYREAAECFD 144

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +++D +    +   G AL  +  Y++A E   +A++L  +  +AW      ++++  +
Sbjct: 145 QGIRIDPDCVRLWAARGQALYRLQHYQEAAEYCGQAVKLAPDCADAWLTRGHAFRNMGRT 204

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
             AL C  +V+ I+    +A+  RG +L    ++  AI      + +DP N    Y R +
Sbjct: 205 TDALACYDRVVTIEPGRIEAWLARGTVLAVDRRYDAAIDCYDRVIALDPGNANAWYARGT 264

Query: 628 CYHAIGEYREAIKDYDAALDLE 649
               +  Y +A+  YD AL ++
Sbjct: 265 IQVLLSRYGDALDSYDQALAID 286



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 60/134 (44%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G A    G+Y +A E + +A++L+ N   AW H  +         +A EC  Q + ID  
Sbjct: 93  GRAYGERGQYDRAIECYDRALKLNANAATAWYHKGRVLNTACRYREAAECFDQGIRIDPD 152

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
             + +  RG  L+ L  +++A +     + + P   +    R   +  +G   +A+  YD
Sbjct: 153 CVRLWAARGQALYRLQHYQEAAEYCGQAVKLAPDCADAWLTRGHAFRNMGRTTDALACYD 212

Query: 644 AALDLELDSMEKFV 657
             + +E   +E ++
Sbjct: 213 RVVTIEPGRIEAWL 226



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/153 (19%), Positives = 70/153 (45%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y   +  +++ L+ DP+       +    +     + A+  + + +++NP   +AW ++
Sbjct: 475 RYEETLVCYERALEIDPVNRGVWNNKANVLSILSHYDKALVCYDQELRANPGNADAWCKK 534

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   LG   EA+   ++ALE +P   +I   +G      +    A+E  +  +  + +
Sbjct: 535 GLALFILGRYGEAVTCYARALEADPAKVEIWSMKGNALVIMERSEEALECYNRALAANPD 594

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +  A   + +AL S+    +A + + +  +L R
Sbjct: 595 DADALRGMTMALISLDRSAEAVKYYERLQRLPR 627



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/112 (21%), Positives = 54/112 (48%)

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           E W    + Y +    ++A+EC  + L ++   + A++ +G +L+   ++++A +    G
Sbjct: 87  EDWCRKGRAYGERGQYDRAIECYDRALKLNANAATAWYHKGRVLNTACRYREAAECFDQG 146

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + IDP  +     R    + +  Y+EA +    A+ L  D  + ++ +  AF
Sbjct: 147 IRIDPDCVRLWAARGQALYRLQHYQEAAEYCGQAVKLAPDCADAWLTRGHAF 198


>gi|427739440|ref|YP_007058984.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
            sp. PCC 7116]
 gi|427374481|gb|AFY58437.1| trypsin-like serine protease with C-terminal PDZ domain [Rivularia
            sp. PCC 7116]
          Length = 1173

 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 132/288 (45%), Gaps = 1/288 (0%)

Query: 377  KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
            +S  V   + RG A    GK   ++  F++ L   P        RG +R   ++ +A + 
Sbjct: 845  RSSHVPAYIGRGKAYAKLGKRQQSLQDFNKALSLQPKNSLIYSSRGYSRLLLKDYQAGVE 904

Query: 437  DFTEAIQSNPS-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            D+ +AI   P  A   +  RG A+        AI D +KA+  +P  A     RG V   
Sbjct: 905  DYNKAIGLTPQLAYLFYNNRGNAQYEQENYKGAIADYTKAISLKPKDAVFYWNRGDVYLT 964

Query: 496  FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
             K +  A+ D +A ++L+ +  SAY   G+AL    +YK A   + KAI L+ N    + 
Sbjct: 965  QKQYQQAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYTKAISLEPNQGVFYS 1024

Query: 556  HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
            +    Y      ++A++     + +++  + AY +R +       +K AI D +  +GI 
Sbjct: 1025 NRGGVYLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIARDMQEDYKGAIADHTEAIGIK 1084

Query: 616  PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            P        R + Y    EYR+AI DY  A+ L++D  + + L+ LA+
Sbjct: 1085 PKEARYYNRRGNTYLKNKEYRKAIADYTTAISLDVDDGDAYGLRSLAY 1132



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 109/236 (46%)

Query: 373  ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
            I  +  ++  F  +RG AQ  +  Y  AI+ + + +   P        RG     Q++ +
Sbjct: 910  IGLTPQLAYLFYNNRGNAQYEQENYKGAIADYTKAISLKPKDAVFYWNRGDVYLTQKQYQ 969

Query: 433  AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
             AI+DFT AI+ NP    A+ +RG A     +   AI D +KA+  EPN       RG V
Sbjct: 970  QAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYTKAISLEPNQGVFYSNRGGV 1029

Query: 493  NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
                K +  A++D +A ++L++EN SAY+   +A     +YK A   H +AI +      
Sbjct: 1030 YLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIARDMQEDYKGAIADHTEAIGIKPKEAR 1089

Query: 553  AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             +      Y       KA+      + +D     AY LR L   GLG  +KAI+DL
Sbjct: 1090 YYNRRGNTYLKNKEYRKAIADYTTAISLDVDDGDAYGLRSLAYAGLGDKQKAIQDL 1145



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 6/280 (2%)

Query: 387  RGIAQVNEGKYASAISIF-DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RG A    G  A  I+ + D I     +  E    RG  R  Q++   A++D+T+A+   
Sbjct: 786  RGYAHYLLGDTAKGIADYNDAIRLNSKLAYEFYTQRGDIRWIQKDYNGAVADYTQALSFR 845

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
             S   A+  RG+A A LG+  +++QD +KAL  +P ++ I   RG      KD+ A VED
Sbjct: 846  SSHVPAYIGRGKAYAKLGKRQQSLQDFNKALSLQPKNSLIYSSRGYSRLLLKDYQAGVED 905

Query: 506  LSACVKLDKENKSAYTYL---GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
             +  + L  +   AY +    G A      YK A   + KAI L       + +    Y 
Sbjct: 906  YNKAIGLTPQ--LAYLFYNNRGNAQYEQENYKGAIADYTKAISLKPKDAVFYWNRGDVYL 963

Query: 563  DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                 ++A+      + ++  ++ AY+ RG+ L     +K AI D +  + ++P+     
Sbjct: 964  TQKQYQQAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYTKAISLEPNQGVFY 1023

Query: 623  YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
              R   Y    +Y++AI D+ AA+ L  ++   + ++ +A
Sbjct: 1024 SNRGGVYLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIA 1063



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 137/305 (44%), Gaps = 8/305 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + R   + N G Y+ AI   ++ LK  P    A + R   R +Q++ + A++D   AI+ 
Sbjct: 682 IRRSRTRSNLGDYSEAIKDLNKALKLQPDLAIAYVQRALVRYWQKDYQEALNDTKTAIRL 741

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P+  +A+   G   A +      I+D +KAL+ +P++A I  +RG  ++   D    + 
Sbjct: 742 QPNFVDAYWVSGLVHAQMNNREGFIKDFNKALQIQPDNAVIYAQRGYAHYLLGDTAKGIA 801

Query: 505 DLSACVKLD-KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           D +  ++L+ K     YT  G       +Y  A   + +A+    + + A+    + Y  
Sbjct: 802 DYNDAIRLNSKLAYEFYTQRGDIRWIQKDYNGAVADYTQALSFRSSHVPAYIGRGKAYAK 861

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   +++L+   + L +  + S  Y  RG     L  ++  ++D +  +G+ P      Y
Sbjct: 862 LGKRQQSLQDFNKALSLQPKNSLIYSSRGYSRLLLKDYQAGVEDYNKAIGLTPQLAYLFY 921

Query: 624 -LRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTAS-KI 676
             R +  +    Y+ AI DY  A+ L+      +     V      YQ+ IA +TA+ ++
Sbjct: 922 NNRGNAQYEQENYKGAIADYTKAISLKPKDAVFYWNRGDVYLTQKQYQQAIADFTAAIRL 981

Query: 677 NSEFC 681
           N ++ 
Sbjct: 982 NPDYA 986



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/337 (22%), Positives = 144/337 (42%), Gaps = 52/337 (15%)

Query: 359 SNEAKRNKKF--CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDP- 412
            NE  R++++    +   +S  I  DF     S G+A + + KY  AI  F    K +P 
Sbjct: 549 GNELWRSRRYKEAQSAFERSTKIKPDFYHGWYSHGMALMRQEKYPEAIKSFKLANKYNPE 608

Query: 413 ----------------MYPEALIGRGTARAFQRELEAAISDF------------------ 438
                            YPEAL      + F++ ++    DF                  
Sbjct: 609 SDRALRQLGDAYWYSGEYPEAL------QTFKQTIQLRPDDFILHNWLADAFNQLGRHPE 662

Query: 439 -----TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
                 ++IQ NP+  E++ RR + R+ LG+  EAI+DL+KAL+ +P+ A    +R +V 
Sbjct: 663 ALQAGNQSIQLNPNLAESYIRRSRTRSNLGDYSEAIKDLNKALKLQPDLAIAYVQRALVR 722

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           +  KD+  A+ D    ++L      AY   GL  + +   +   +   KA+Q+  +    
Sbjct: 723 YWQKDYQEALNDTKTAIRLQPNFVDAYWVSGLVHAQMNNREGFIKDFNKALQIQPDNAVI 782

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFS-KAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           +      +  L ++ K +      + ++ + + + Y  RG +      +  A+ D +  L
Sbjct: 783 YAQRGYAHYLLGDTAKGIADYNDAIRLNSKLAYEFYTQRGDIRWIQKDYNGAVADYTQAL 842

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
               S++     R   Y  +G+ +++++D++ AL L+
Sbjct: 843 SFRSSHVPAYIGRGKAYAKLGKRQQSLQDFNKALSLQ 879



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 90/194 (46%)

Query: 383  FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
            F  +RG   + + +Y  AI+ F   ++ +P Y  A   RG A    ++ + AI+D+T+AI
Sbjct: 954  FYWNRGDVYLTQKQYQQAIADFTAAIRLNPDYASAYNKRGIALEHGKDYKGAIADYTKAI 1013

Query: 443  QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
               P+ G  +  RG       +  +AI D + A+     +A     R I     +D+  A
Sbjct: 1014 SLEPNQGVFYSNRGGVYLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIARDMQEDYKGA 1073

Query: 503  VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
            + D +  + +  +    Y   G       EY+KA   +  AI LD +  +A+G  +  Y 
Sbjct: 1074 IADHTEAIGIKPKEARYYNRRGNTYLKNKEYRKAIADYTTAISLDVDDGDAYGLRSLAYA 1133

Query: 563  DLANSEKALECLQQ 576
             L + +KA++ LQ+
Sbjct: 1134 GLGDKQKAIQDLQK 1147



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/277 (23%), Positives = 130/277 (46%), Gaps = 10/277 (3%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           R  + A S F  + +  P     W   G A     +  EAI+    A ++ P S   L +
Sbjct: 556 RRYKEAQSAFERSTKIKPDFYHGWYSHGMALMRQEKYPEAIKSFKLANKYNPESDRALRQ 615

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            G   +   ++  A++     ++L  ++   + +L  A + +G + +A +A  ++IQL+ 
Sbjct: 616 LGDAYWYSGEYPEALQTFKQTIQLRPDDFILHNWLADAFNQLGRHPEALQAGNQSIQLNP 675

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N  E++   ++   +L +  +A++ L + L +    + AY  R L+ +    +++A+ D 
Sbjct: 676 NLAESYIRRSRTRSNLGDYSEAIKDLNKALKLQPDLAIAYVQRALVRYWQKDYQEALNDT 735

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREA-IKDYDAALDLELDSMEKFVLQCLAFY--- 664
            + + + P+ ++  Y  +   HA    RE  IKD++ AL ++ D+   +  +  A Y   
Sbjct: 736 KTAIRLQPNFVDA-YWVSGLVHAQMNNREGFIKDFNKALQIQPDNAVIYAQRGYAHYLLG 794

Query: 665 --QKEIALYT-ASKINSEFCW--FDIDGDIDPLFKEY 696
              K IA Y  A ++NS+  +  +   GDI  + K+Y
Sbjct: 795 DTAKGIADYNDAIRLNSKLAYEFYTQRGDIRWIQKDY 831



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 110/258 (42%), Gaps = 7/258 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G++  A+   +Q ++ +P   E+ I R   R+   +   AI D  +A++  P    A+ +
Sbjct: 658 GRHPEALQAGNQSIQLNPNLAESYIRRSRTRSNLGDYSEAIKDLNKALKLQPDLAIAYVQ 717

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R   R    +  EA+ D   A+  +PN  D     G+V+ +  +    ++D +  +++  
Sbjct: 718 RALVRYWQKDYQEALNDTKTAIRLQPNFVDAYWVSGLVHAQMNNREGFIKDFNKALQIQP 777

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN----FLEAWGHLTQFYQDLANSEKA 570
           +N   Y   G A   +G+  K    +  AI+L+      F    G +    +D      A
Sbjct: 778 DNAVIYAQRGYAHYLLGDTAKGIADYNDAIRLNSKLAYEFYTQRGDIRWIQKDY---NGA 834

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           +    Q L        AY  RG     LG+ +++++D +  L + P N      R     
Sbjct: 835 VADYTQALSFRSSHVPAYIGRGKAYAKLGKRQQSLQDFNKALSLQPKNSLIYSSRGYSRL 894

Query: 631 AIGEYREAIKDYDAALDL 648
            + +Y+  ++DY+ A+ L
Sbjct: 895 LLKDYQAGVEDYNKAIGL 912



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 5/142 (3%)

Query: 376  SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            +K+IS++     F  +RG   + + +Y  AI  F   ++ +     A   R  AR  Q +
Sbjct: 1010 TKAISLEPNQGVFYSNRGGVYLTQKQYQQAIDDFTAAIRLNQENASAYSIRAIARDMQED 1069

Query: 431  LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
             + AI+D TEAI   P     + RRG       E  +AI D + A+  + +  D    R 
Sbjct: 1070 YKGAIADHTEAIGIKPKEARYYNRRGNTYLKNKEYRKAIADYTTAISLDVDDGDAYGLRS 1129

Query: 491  IVNFKFKDFNAAVEDLSACVKL 512
            +      D   A++DL    ++
Sbjct: 1130 LAYAGLGDKQKAIQDLQKASQI 1151


>gi|307591404|ref|YP_003900203.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306986258|gb|ADN18137.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
          Length = 535

 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 139/284 (48%), Gaps = 11/284 (3%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG    F +E E A+SDF +AI   P    A+  R      L +  +++ DL+K +E  P
Sbjct: 84  RGMIHYFFKEYEQALSDFNKAIDIYPQDENAFYNRAFVYWELEQYDQSLSDLAKTIEINP 143

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            S +  ++RG++ ++ + ++ A+ DL+  + ++      Y    L    + +Y +A   +
Sbjct: 144 QSVNAYNQRGLLYWELEQYDQALSDLNKAIDINPLFAYPYGNRALVYWKLKKYDQALFNY 203

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            K I+LD     A+ +    Y  L   +KA+    +V+ +D + ++AY  RGLL + L Q
Sbjct: 204 NKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVIDLDPQCTEAYEKRGLLYYKLQQ 263

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
           + K + D S  + ++P +      R S Y  + EY +A+ DY  A++ + +S   + ++ 
Sbjct: 264 YDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLDYYKAIEFKPESEVGYYIRG 323

Query: 661 LAFYQKEIALYTASKINSEFCWFDIDG--DIDPLFKEYWCKRLH 702
                    LY   K   E   FD +   +I+PLF + +C+R H
Sbjct: 324 --------DLYLELK-EYEKALFDYNRAIEINPLFIDPYCQRGH 358



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 140/309 (45%), Gaps = 17/309 (5%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+      +Y  A+S F++ +   P    A   R        + + ++SD  + I+ NP
Sbjct: 84  RGMIHYFFKEYEQALSDFNKAIDIYPQDENAFYNRAFVYWELEQYDQSLSDLAKTIEINP 143

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            +  A+ +RG     L +  +A+ DL+KA++  P  A     R +V +K K ++ A+ + 
Sbjct: 144 QSVNAYNQRGLLYWELEQYDQALSDLNKAIDINPLFAYPYGNRALVYWKLKKYDQALFNY 203

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++LD +  +AY Y     S + EY KA   + K I LD    EA+      Y  L  
Sbjct: 204 NKLIELDSQCTNAYHYRDDLYSKLEEYDKAISDYSKVIDLDPQCTEAYEKRGLLYYKLQQ 263

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            +K L    + + ++ +    Y  RG     L ++ KA+ D    +   P +    Y+R 
Sbjct: 264 YDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLDYYKAIEFKPESEVGYYIRG 323

Query: 627 SCYHAIGEYREAIKDYDAALDLE-------------LDSMEKFVLQCLAFYQKEIALYTA 673
             Y  + EY +A+ DY+ A+++                +++K+  Q L+ Y K I LY A
Sbjct: 324 DLYLELKEYEKALFDYNRAIEINPLFIDPYCQRGHIYKALKKYT-QALSDYNKAIELYPA 382

Query: 674 SKINSEFCW 682
           S   +EF +
Sbjct: 383 S---AEFYY 388



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 126/261 (48%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AIS + +++  DP   EA   RG      ++ +  +SD+++AI+ NP     +  R
Sbjct: 229 EYDKAISDYSKVIDLDPQCTEAYEKRGLLYYKLQQYDKVLSDYSKAIELNPQDDAEYIAR 288

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L E  +A+ D  KA+EF+P S    + RG +  + K++  A+ D +  ++++  
Sbjct: 289 GSFYFELKEYDKALLDYYKAIEFKPESEVGYYIRGDLYLELKEYEKALFDYNRAIEINPL 348

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
               Y   G    ++ +Y +A   + KAI+L     E + +    Y  L +  KAL    
Sbjct: 349 FIDPYCQRGHIYKALKKYTQALSDYNKAIELYPASAEFYYNRGDLYFQLKDYSKALSDYN 408

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + +  D  F+ AY  RG L   L ++ +A+ D +  + ++P + +  Y R S Y  + EY
Sbjct: 409 KAIENDADFNDAYSKRGNLYKDLKKYAQALSDYNKAIELNPQDADLYYNRGSIYLELKEY 468

Query: 636 REAIKDYDAALDLELDSMEKF 656
            +A+ D   A+    +S E +
Sbjct: 469 EKAVIDLSQAIKFNSESPEAY 489



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 103/203 (50%), Gaps = 3/203 (1%)

Query: 415 PEALIG---RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           PE+ +G   RG      +E E A+ D+  AI+ NP   + + +RG    AL +  +A+ D
Sbjct: 313 PESEVGYYIRGDLYLELKEYEKALFDYNRAIEINPLFIDPYCQRGHIYKALKKYTQALSD 372

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            +KA+E  P SA+  + RG + F+ KD++ A+ D +  ++ D +   AY+  G     + 
Sbjct: 373 YNKAIELYPASAEFYYNRGDLYFQLKDYSKALSDYNKAIENDADFNDAYSKRGNLYKDLK 432

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           +Y +A   + KAI+L+    + + +    Y +L   EKA+  L Q +  +    +AY  R
Sbjct: 433 KYAQALSDYNKAIELNPQDADLYYNRGSIYLELKEYEKAVIDLSQAIKFNSESPEAYSKR 492

Query: 592 GLLLHGLGQHKKAIKDLSSGLGI 614
           GLL    G  ++A  DL +   +
Sbjct: 493 GLLCQKAGNKQQARSDLQTAASL 515



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 11/210 (5%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           F   R  +   + +D    RG       KY  A+S +++ ++  P   E    RG     
Sbjct: 337 FDYNRAIEINPLFIDPYCQRGHIYKALKKYTQALSDYNKAIELYPASAEFYYNRGDLYFQ 396

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
            ++   A+SD+ +AI+++    +A+ +RG     L +  +A+ D +KA+E  P  AD+ +
Sbjct: 397 LKDYSKALSDYNKAIENDADFNDAYSKRGNLYKDLKKYAQALSDYNKAIELNPQDADLYY 456

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG +  + K++  AV DLS  +K + E+  AY+  GL     G  ++A           
Sbjct: 457 NRGSIYLELKEYEKAVIDLSQAIKFNSESPEAYSKRGLLCQKAGNKQQA----------- 505

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQV 577
           R+ L+    L +   DL N ++ ++ L+++
Sbjct: 506 RSDLQTAASLFRLRGDLKNYKQIMDVLRKL 535



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 110/235 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+      +Y   +S + + ++ +P      I RG+     +E + A+ D+ +AI+  P
Sbjct: 254 RGLLYYKLQQYDKVLSDYSKAIELNPQDDAEYIARGSFYFELKEYDKALLDYYKAIEFKP 313

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            +   +  RG     L E  +A+ D ++A+E  P   D   +RG +    K +  A+ D 
Sbjct: 314 ESEVGYYIRGDLYLELKEYEKALFDYNRAIEINPLFIDPYCQRGHIYKALKKYTQALSDY 373

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++L   +   Y   G     + +Y KA   + KAI+ D +F +A+      Y+DL  
Sbjct: 374 NKAIELYPASAEFYYNRGDLYFQLKDYSKALSDYNKAIENDADFNDAYSKRGNLYKDLKK 433

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             +AL    + + ++ + +  Y+ RG +   L +++KA+ DLS  +  +  + E 
Sbjct: 434 YAQALSDYNKAIELNPQDADLYYNRGSIYLELKEYEKAVIDLSQAIKFNSESPEA 488


>gi|224588324|gb|ACN58948.1| hypothetical protein AKSOIL_0107 [uncultured bacterium BLR7]
          Length = 428

 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 122/255 (47%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           EGKYA A+  F + ++ DP   +A   RG       + + AI+DF  AI  +P+   ++ 
Sbjct: 126 EGKYAEAVQAFSRAVERDPNMAQAYAFRGYTHNSLNDYDRAIADFARAIAIDPNDATSFS 185

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG   +   +   AI D  +A++ +P      + RG V     D + A+ D    ++LD
Sbjct: 186 DRGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLD 245

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
                AY   G++  + G+  +A   + KAI+LD  F  A+G+    Y D  + E A++ 
Sbjct: 246 PNYAEAYGNRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQD 305

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             Q + +D    + Y+ R   L   G+ ++A+ D +  L   P        R   Y  +G
Sbjct: 306 DDQAVKLDPDNPERYNNRCYALATAGRAQEALADCNIALARSPDAAFMWDSRGYAYLRLG 365

Query: 634 EYREAIKDYDAALDL 648
           +YR +I+DYDAAL L
Sbjct: 366 QYRRSIEDYDAALRL 380



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 103/201 (51%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G+  EA+Q  S+A+E +PN A     RG  +    D++ A+ D +  + +D  + ++++ 
Sbjct: 127 GKYAEAVQAFSRAVERDPNMAQAYAFRGYTHNSLNDYDRAIADFARAIAIDPNDATSFSD 186

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            G+  S+  +Y +A   + +AI+LD     A+      Y  L + ++AL    + + +D 
Sbjct: 187 RGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLDP 246

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
            +++AY  RG+     G + +AI + S  + +DP        R   Y+  G+Y  AI+D 
Sbjct: 247 NYAEAYGNRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQDD 306

Query: 643 DAALDLELDSMEKFVLQCLAF 663
           D A+ L+ D+ E++  +C A 
Sbjct: 307 DQAVKLDPDNPERYNNRCYAL 327



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 34/239 (14%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+   N+  YA AI+ +DQ +K DP    A  GRGT      + + A++D+ EAI+ +P
Sbjct: 187 RGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLDP 246

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA+  RG +  A G++  AI + SKA+E +P  A+    RGI  +   D+  A++D 
Sbjct: 247 NYAEAYGNRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQDD 306

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              VKLD +N   Y     AL++ G   +A+EA                        LA+
Sbjct: 307 DQAVKLDPDNPERYNNRCYALATAG---RAQEA------------------------LAD 339

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              AL       ++       +  RG     LGQ++++I+D  + L ++P++ + LY R
Sbjct: 340 CNIALARSPDAAFM-------WDSRGYAYLRLGQYRRSIEDYDAALRLNPTHAQALYGR 391



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 5/131 (3%)

Query: 373 ISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           +  SK+I +D + +     RGIA  ++G Y  AI   DQ +K DP  PE    R  A A 
Sbjct: 270 LEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQDDDQAVKLDPDNPERYNNRCYALAT 329

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
               + A++D   A+  +P A   W  RG A   LG+   +I+D   AL   P  A  L+
Sbjct: 330 AGRAQEALADCNIALARSPDAAFMWDSRGYAYLRLGQYRRSIEDYDAALRLNPTHAQALY 389

Query: 488 ERGIVNFKFKD 498
            RG+   K  D
Sbjct: 390 GRGVAKLKNGD 400



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 68/136 (50%)

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G+Y +A +A  +A++ D N  +A+      +  L + ++A+    + + ID   + ++  
Sbjct: 127 GKYAEAVQAFSRAVERDPNMAQAYAFRGYTHNSLNDYDRAIADFARAIAIDPNDATSFSD 186

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RG++      + +AI D    + +DP        R + Y+A+G+   A+ DYD A+ L+ 
Sbjct: 187 RGMVFSNKKDYARAIADYDQAIKLDPKLTYAFNGRGTVYNALGDDDRALADYDEAIRLDP 246

Query: 651 DSMEKFVLQCLAFYQK 666
           +  E +  + ++F  K
Sbjct: 247 NYAEAYGNRGVSFKAK 262



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 69/141 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG++   +G    AI  + + ++ DP +  A   RG A   + + E AI D  +A++ +
Sbjct: 254 NRGVSFKAKGDNDRAILEYSKAIELDPKFANAFGNRGIAYYDKGDYEHAIQDDDQAVKLD 313

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E +  R  A A  G + EA+ D + AL   P++A +   RG    +   +  ++ED
Sbjct: 314 PDNPERYNNRCYALATAGRAQEALADCNIALARSPDAAFMWDSRGYAYLRLGQYRRSIED 373

Query: 506 LSACVKLDKENKSAYTYLGLA 526
             A ++L+  +  A    G+A
Sbjct: 374 YDAALRLNPTHAQALYGRGVA 394



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 11/117 (9%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSY 67
           L    + + + DE +R+D   A A   R    K       ++  +SKAI  LD   A ++
Sbjct: 228 LGDDDRALADYDEAIRLDPNYAEAYGNRGVSFKAKGDNDRAILEYSKAIE-LDPKFANAF 286

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
                 NR   Y     ++H I+D D+A++LDP   + Y  +  A +  GR +EAL+
Sbjct: 287 -----GNRGIAYYDKGDYEHAIQDDDQAVKLDPDNPERYNNRCYALATAGRAQEALA 338


>gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
 gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein
           [Methanothermobacter marburgensis str. Marburg]
          Length = 406

 Score =  106 bits (265), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 134/255 (52%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A+  +++ L+ +P   +A   +G+   + ++ + A+  F +AI+ NP    AW  
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G     L    EA++   K L+  P      + +G+V  +   ++ ++E     ++++ 
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+   G+ LS +G Y++A E + KA+++D    + W +     ++L   E ALEC 
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDALECF 311

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           Q+ L I+  F+ A+  +G++L  L + ++++K     L ++P N    Y++      +G+
Sbjct: 312 QKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALKLNPQNKTLWYMQGKTLQKLGK 371

Query: 635 YREAIKDYDAALDLE 649
           ++EA+K Y+ +L ++
Sbjct: 372 HKEALKCYEKSLKID 386



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 5/311 (1%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  +I K+     +   ++G+     G+Y  A+  +++ LK +P Y  A   +       
Sbjct: 72  CYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKEL 131

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              + A+  + +A+Q NP   +AW  +G     L +  +A++   KA+E  P +      
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +GI     K +  A++     ++L+ ++  A+   GL  + +G Y ++ E + KA+Q++ 
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              EAW +      +L   E+ALEC ++ L ID    K ++ +GL+L  LG+++ A++  
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDALECF 311

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE-----LDSMEKFVLQCLAF 663
              L I+P   +    +      + E  E++K Y  AL L      L  M+   LQ L  
Sbjct: 312 QKALEINPEFADAWKWKGIILEDLKEPEESLKCYKKALKLNPQNKTLWYMQGKTLQKLGK 371

Query: 664 YQKEIALYTAS 674
           +++ +  Y  S
Sbjct: 372 HKEALKCYEKS 382



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 151/304 (49%), Gaps = 6/304 (1%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + L+ G + + +GKY  A+  F + LK  P  PE L          +  E A+  + + +
Sbjct: 18  WHLAGGRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKIL 77

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           ++NP   EAW  +G     LG   EA++   KAL+  P  A   + + +V  +   ++ A
Sbjct: 78  KNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEA 137

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +E     ++++ +   A+   G  L  + +YKKA +   KAI+L+     AWG       
Sbjct: 138 LECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTKGITLH 197

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +L   E+AL+C  +VL ++ +  KA++ +GL+ + LG++ ++++     L I+P   E  
Sbjct: 198 NLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAW 257

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIALYT-ASKI 676
             +      +G Y EA++ Y+ AL+++ +     + +  VL+ L  Y+  +  +  A +I
Sbjct: 258 NNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYEDALECFQKALEI 317

Query: 677 NSEF 680
           N EF
Sbjct: 318 NPEF 321



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 34/231 (14%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI   N   Y  A+  +D++L+ +P   +A   +G         + ++  + +A+Q N
Sbjct: 191 TKGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQIN 250

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  +G   + LG   EA++   KALE +P                         
Sbjct: 251 PKLAEAWNNKGVVLSELGRYEEALECYEKALEIDP------------------------- 285

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                    E+   +   GL L  +G+Y+ A E   KA++++  F +AW       +DL 
Sbjct: 286 ---------EDDKTWNNKGLVLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLK 336

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
             E++L+C ++ L ++ +    ++++G  L  LG+HK+A+K     L IDP
Sbjct: 337 EPEESLKCYKKALKLNPQNKTLWYMQGKTLQKLGKHKEALKCYEKSLKIDP 387



 Score = 42.7 bits (99), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           N+   +++L  +   +   +KALQ++P L +A+  KG   S LGR EEAL  +EK  E
Sbjct: 225 NKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALE 282


>gi|296126637|ref|YP_003633889.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296018453|gb|ADG71690.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 804

 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 140/290 (48%), Gaps = 5/290 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ +   G Y  AI  + +I+++D         R  A+      E A+ D+ +AI+ NP 
Sbjct: 300 GLIEYKLGNYKEAIKYYTKIIEKDEYISYIYYNRALAKEALELYEDALKDYDKAIELNPD 359

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              ++  RG  +  +    EA++D +KA+E E N A + + R ++  +   +  A+ED  
Sbjct: 360 DTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRIHLYREALEDFD 419

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + L  EN   Y + GL    + E+ +A +   KAI+L+  +++A+      Y    N 
Sbjct: 420 KAISLYDENSEFYYFRGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIYYRTENY 479

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A++  ++VL +D     AY+   L    L  +  A+K  +  + +D +++E  Y RA 
Sbjct: 480 DEAIKDFKKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIELDNNSLEAYYNRAL 539

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT 672
               I  Y EAI+D+   ++L+ ++ + ++   + +     Y K I  YT
Sbjct: 540 AKMEINLYNEAIEDFKRIIELDKENTDAYLNIGICYDYMEEYNKSIEYYT 589



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 116/217 (53%), Gaps = 4/217 (1%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+ DF +AI       E +  RG     L E  EA++ ++KA+E      D  +ER I+ 
Sbjct: 414 ALEDFDKAISLYDENSEFYYFRGLTNFYLNEFDEALKYINKAIELNNEYIDAYNERAIIY 473

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           ++ ++++ A++D    ++LD EN  AY +L L+   + +Y  A + + K I+LD N LEA
Sbjct: 474 YRTENYDEAIKDFKKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTKVIELDNNSLEA 533

Query: 554 WGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           + +  L +   +L N  +A+E  ++++ +DK  + AY   G+    + ++ K+I+  +  
Sbjct: 534 YYNRALAKMEINLYN--EAIEDFKRIIELDKENTDAYLNIGICYDYMEEYNKSIEYYTKV 591

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + ID   ++  Y R     A+  Y EA +D+  A+D+
Sbjct: 592 IEIDNKALDAYYNRGLSKVALKLYNEAFEDFIRAIDI 628



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 79/363 (21%), Positives = 153/363 (42%), Gaps = 55/363 (15%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I+ + +  VD   +R I++ N   Y  AI  FD++++  P   +A   RG ++++ +  E
Sbjct: 75  INITHNTLVDAYYNRAISKFNLKNYEEAIKDFDKVIELSPDKTDAYYNRGHSKSYLKRYE 134

Query: 433 AAISDFTEAIQSNPSAGEA---------------------------------------WK 453
             I DF + ++ +    EA                                       + 
Sbjct: 135 EGIEDFKKVLEFDEDDFEAVYYVGLGYFYLANYEEAIKNFDLALYLIEKTEEEYIADIYY 194

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG +++ L    EA+ D +K ++   + ++  + + +  F    +  A+ D    ++LD
Sbjct: 195 YRGHSKSYLTRYEEALSDFNKLVQLREDDSEAFYFKALTEFYLGLYEEAINDFDISIELD 254

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDLANSEKALE 572
               +AY + GL+ S++  Y +A E + KAI  D  N +  +         L N ++A++
Sbjct: 255 SNASNAYYFRGLSKSNLELYDEAREDYQKAIDFDPENIISIYNDAGLIEYKLGNYKEAIK 314

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              +++  D+  S  Y+ R L    L  ++ A+KD    + ++P +      R    + +
Sbjct: 315 YYTKIIEKDEYISYIYYNRALAKEALELYEDALKDYDKAIELNPDDTYSYNNRGLIKNEM 374

Query: 633 GEYREAIKDYDAALDLE------------LDSMEKFVLQCLAFYQKEIALYTASKINSEF 680
             Y EA++DY+ A++LE            L        + L  + K I+LY     NSEF
Sbjct: 375 QMYDEALEDYNKAIELEQNDAYLYNNRALLKGRIHLYREALEDFDKAISLYDE---NSEF 431

Query: 681 CWF 683
            +F
Sbjct: 432 YYF 434



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 117/273 (42%), Gaps = 23/273 (8%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D    R I       Y  AI  F ++L+ D     A      +     + + A+  +T+
Sbjct: 463 IDAYNERAIIYYRTENYDEAIKDFKKVLELDNENVYAYYHLALSYECLEDYDNAVKYYTK 522

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            I+ + ++ EA+  R  A+  +    EAI+D  + +E +  + D     GI     +++N
Sbjct: 523 VIELDNNSLEAYYNRALAKMEINLYNEAIEDFKRIIELDKENTDAYLNIGICYDYMEEYN 582

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            ++E  +  +++D +   AY   GL+  ++  Y +A E  ++AI ++ N+L A+  +   
Sbjct: 583 KSIEYYTKVIEIDNKALDAYYNRGLSKVALKLYNEAFEDFIRAIDINSNYLNAYNGIGFS 642

Query: 561 YQDLANSE-------KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
               +N+E       KA+E L   L         Y+ +GL L         I D  +   
Sbjct: 643 KTKYSNNELKKGNINKAIELLNDAL--------VYYNKGLALD--------IDDNITNAS 686

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           I  S    +   A+ Y  + +   A+K YD AL
Sbjct: 687 IYDSMGYTITKLANIYQTMNDKENALKYYDEAL 719


>gi|384215071|ref|YP_005606236.1| hypothetical protein BJ6T_13600 [Bradyrhizobium japonicum USDA 6]
 gi|354953969|dbj|BAL06648.1| hypothetical protein BJ6T_13600 [Bradyrhizobium japonicum USDA 6]
          Length = 461

 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 5/243 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G    A +   + ++ DP   EA   RG     QR L+ A++D+ +AI+  P   +AW  
Sbjct: 121 GDLNRAAADLSKAIELDPQDAEAYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSD 180

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG      G++ +AI+DLS+AL  +PN       RG    K    + AV D    ++LD 
Sbjct: 181 RGVNYYLGGDNEKAIRDLSEALRLDPNRPRAYTNRGAAYKKLGQLDKAVADDGEAIRLDP 240

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQDLANSEKALE 572
           +    Y   GL L+++GEY KA   + +A++L    NF    G   Q   +L     AL 
Sbjct: 241 KVPEYYDNRGLVLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSHQLKGELG---AALS 297

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
             +  L ID  F++ Y+ R +L   +G+ KKA+ D  + L +DP N      R S    I
Sbjct: 298 DYEAALKIDPNFAQTYNNRAVLYKKMGERKKALADYETALKLDPGNENAANGRRSMVAEI 357

Query: 633 GEY 635
            ++
Sbjct: 358 AKF 360



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 35/283 (12%)

Query: 402 SIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKRRGQA-R 459
           +I DQ          AL+ R  A A     L  A+ D   AI  N    +AW+ RG   R
Sbjct: 58  AIIDQTANSSADRAAALLVRADANARTSGGLTQALRDIDRAIALNGRNAKAWRLRGDLLR 117

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
            A G+   A  DLSKA+E +P  A+    RG+V    +  + A+ D    +KL  ++  A
Sbjct: 118 EAGGDLNRAAADLSKAIELDPQDAEAYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQA 177

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           ++  G+     G+ +KA     +A++LD N   A+ +    Y+ L   +KA+    + + 
Sbjct: 178 WSDRGVNYYLGGDNEKAIRDLSEALRLDPNRPRAYTNRGAAYKKLGQLDKAVADDGEAIR 237

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAI---------------------------------K 606
           +D +  + Y  RGL+L  +G++ KAI                                  
Sbjct: 238 LDPKVPEYYDNRGLVLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSHQLKGELGAALS 297

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           D  + L IDP+  +    RA  Y  +GE ++A+ DY+ AL L+
Sbjct: 298 DYEAALKIDPNFAQTYNNRAVLYKKMGERKKALADYETALKLD 340



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 502 AVEDLSACVKLDKENKSAYTYLG-LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           A+ D+   + L+  N  A+   G L   + G+  +A     KAI+LD    EA+      
Sbjct: 91  ALRDIDRAIALNGRNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAEAYELRGVV 150

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y +    ++AL    Q + +    ++A+  RG+  +  G ++KAI+DLS  L +DP+   
Sbjct: 151 YTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVNYYLGGDNEKAIRDLSEALRLDPNRPR 210

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TAS 674
               R + Y  +G+  +A+ D   A+ L+    E +     VL  +  Y K IA Y  A 
Sbjct: 211 AYTNRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLVLAAMGEYDKAIADYDQAL 270

Query: 675 KINSEFCWFDIDGD 688
           ++     +F   GD
Sbjct: 271 RLAPRPNFFTNRGD 284



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 1/116 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+     G+Y  AI+ +DQ L+  P  P     RG +   + EL AA+SD+  A++ +
Sbjct: 248 NRGLVLAAMGEYDKAIADYDQALRLAPR-PNFFTNRGDSHQLKGELGAALSDYEAALKID 306

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           P+  + +  R      +GE  +A+ D   AL+ +P + +  + R  +  +   F A
Sbjct: 307 PNFAQTYNNRAVLYKKMGERKKALADYETALKLDPGNENAANGRRSMVAEIAKFGA 362


>gi|390947945|ref|YP_006411705.1| hypothetical protein Alfi_2764 [Alistipes finegoldii DSM 17242]
 gi|390424514|gb|AFL79020.1| tetratricopeptide repeat protein [Alistipes finegoldii DSM 17242]
          Length = 662

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 122/273 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA+ N      A + F   ++ +P+Y +A   R   R+     + A+ DF EAI+  P
Sbjct: 66  RGIAKYNLDDLLGAEADFSTAIRMNPVYTQAYTYRAITRSRLGNYDDALQDFREAIELRP 125

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG  R    +  EAI D  K +  E   AD    RG+     KD   A ++ 
Sbjct: 126 DLPGPYYSRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNF 185

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++ ++EN + Y   G        Y +AE    KAI+ D  +L ++ +    Y +   
Sbjct: 186 NTAIRTNRENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNR 245

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              AL    +V+ +D   S  Y  R +L   +G + +A++D        P+N+   Y RA
Sbjct: 246 PMLALSDFDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRA 305

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
             Y  +GE  +A +DY +A+ L  D    ++ +
Sbjct: 306 GVYAQLGEIEKAAEDYTSAIKLYPDFANAYIYR 338



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 112/254 (44%), Gaps = 14/254 (5%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI   + +L+ D    E    RG A+    +L  A +DF+ AI+ NP   +A+  R 
Sbjct: 42  YQEAIRTLNTLLRFDENAFEGYFLRGIAKYNLDDLLGAEADFSTAIRMNPVYTQAYTYRA 101

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
             R+ LG   +A+QD  +A+E  P+     + RG+     + F  A++D    ++ + + 
Sbjct: 102 ITRSRLGNYDDALQDFREAIELRPDLPGPYYSRGVTRLLNQQFTEAIDDFDKFIRQENKV 161

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL-------ANSEK 569
             A+   GL+   + +  +A +    AI+ +R     +      Y +        A+  K
Sbjct: 162 ADAFICRGLSYLHLKDTVRAYDNFNTAIRTNRENPNGYNRRGGLYMEQKRYPEAEADFNK 221

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A+EC       D  +  +Y  R L+     +   A+ D    + +D +N    + RA   
Sbjct: 222 AIEC-------DSTYLLSYFNRALVYSNTNRPMLALSDFDKVIQLDSTNSLTYFNRAMLR 274

Query: 630 HAIGEYREAIKDYD 643
             IG+Y  A++DYD
Sbjct: 275 TQIGDYNRALEDYD 288



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 31/159 (19%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
             RG++Q    +Y +A++ F   ++ +P  P   + R T RA            +QR   
Sbjct: 487 FERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRITI 546

Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
                             + A++D  +AI+  P    ++  R   RA  G   EA +D +
Sbjct: 547 DSDPANRLNNNSKRTYSYDEAVADLNKAIKLFPDLAYSYYNRANLRALSGSLPEAFEDYT 606

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
           KA+E  PN A+  + RGI+    KD      D+S   +L
Sbjct: 607 KAIELNPNFAEAYYNRGIIQIFMKDTRKGCLDISKAGEL 645



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 37/228 (16%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+ ++   ++  AI  FD+ ++++    +A I RG +    ++   A  +F  AI++N
Sbjct: 133 SRGVTRLLNQQFTEAIDDFDKFIRQENKVADAFICRGLSYLHLKDTVRAYDNFNTAIRTN 192

Query: 446 PSAGEAWKRRG----------QARAALGESVE------------------------AIQD 471
                 + RRG          +A A   +++E                        A+ D
Sbjct: 193 RENPNGYNRRGGLYMEQKRYPEAEADFNKAIECDSTYLLSYFNRALVYSNTNRPMLALSD 252

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             K ++ +  ++     R ++  +  D+N A+ED          N   Y       + +G
Sbjct: 253 FDKVIQLDSTNSLTYFNRAMLRTQIGDYNRALEDYDKVALYSPNNVLVYYNRAGVYAQLG 312

Query: 532 EYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQ 576
           E +KA E +  AI+L  +F  A+   G L +  +D   ++K  +  Q+
Sbjct: 313 EIEKAAEDYTSAIKLYPDFANAYIYRGRLRELLRDPQGAKKDRDTAQK 360



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 10/152 (6%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
            L  RG ++A  ++   A++ F+ AI+ NPS    +  R   RA + + + +I +  + +
Sbjct: 485 VLFERGVSQALIKQYTNAVNTFSSAIELNPSNPFLYLNRSTTRAEMIDFISSIDNSYQRI 544

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-LSSI-GEYK 534
             + + A+ L+      + + +   AV DL+  +KL  +   AY+Y   A L ++ G   
Sbjct: 545 TIDSDPANRLNNNSKRTYSYDE---AVADLNKAIKLFPD--LAYSYYNRANLRALSGSLP 599

Query: 535 KAEEAHLKAIQLDRNFLEAW---GHLTQFYQD 563
           +A E + KAI+L+ NF EA+   G +  F +D
Sbjct: 600 EAFEDYTKAIELNPNFAEAYYNRGIIQIFMKD 631


>gi|167753497|ref|ZP_02425624.1| hypothetical protein ALIPUT_01771 [Alistipes putredinis DSM 17216]
 gi|167658122|gb|EDS02252.1| tetratricopeptide repeat protein [Alistipes putredinis DSM 17216]
          Length = 671

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 120/271 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+ N      A + F   + ++P++  A I R   R      + A+ DF EAI   P
Sbjct: 69  RGVAKFNLDDLLGADTDFSAAIVKNPVFTTAYIYRALTRTRMGNYDDALQDFREAIDLRP 128

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG  R    +  EAI+D  K +  E   AD    RG      KD   A+E+ 
Sbjct: 129 DLPDAYYSRGYTRLQNKQYEEAIEDFDKFIFQENKVADAYIGRGTAYLYLKDTVRALENF 188

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++ ++EN + Y   G  L    EY +AE     +I+ D  FL  + +    Y +   
Sbjct: 189 DQAIRTNRENPNGYYQRGTLLLQKEEYARAEADFDMSIRCDSAFLPPYFNRAVVYSNTNR 248

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +AL    +VL +D   S  Y  R +L   +G + +A+ D        P N++  YLRA
Sbjct: 249 PMQALADFDRVLQLDSTNSFTYFNRAILRTQIGDYNRALDDFDRVALYSPGNVQVYYLRA 308

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                +G+   A +DY  A++L  D    ++
Sbjct: 309 MLKTRLGDLEGAERDYTRAIELYPDFANAYL 339



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 34/203 (16%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG  ++   +Y  AI  FD+ + ++    +A IGRGTA  + ++   A+ +F +AI++N
Sbjct: 136 SRGYTRLQNKQYEEAIEDFDKFIFQENKVADAYIGRGTAYLYLKDTVRALENFDQAIRTN 195

Query: 446 PSAGEAWKRRG----------QARAALGESV------------------------EAIQD 471
                 + +RG          +A A    S+                        +A+ D
Sbjct: 196 RENPNGYYQRGTLLLQKEEYARAEADFDMSIRCDSAFLPPYFNRAVVYSNTNRPMQALAD 255

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             + L+ +  ++     R I+  +  D+N A++D          N   Y    +  + +G
Sbjct: 256 FDRVLQLDSTNSFTYFNRAILRTQIGDYNRALDDFDRVALYSPGNVQVYYLRAMLKTRLG 315

Query: 532 EYKKAEEAHLKAIQLDRNFLEAW 554
           + + AE  + +AI+L  +F  A+
Sbjct: 316 DLEGAERDYTRAIELYPDFANAY 338



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI+  D+ L+  P + EA   RGT  A   +L  A  DF+ AI+ NP   EA+  RG
Sbjct: 570 YDEAIADLDKTLRLFPNFAEAYYNRGTLLALSGKLPEAFEDFSRAIELNPLFAEAFYNRG 629

Query: 457 QARAALGESVEAIQDLSKALEFEPNSA 483
             +  + ++ +   DLSKA E    SA
Sbjct: 630 MTQIYMKDTRKGCLDLSKAGELGITSA 656



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI+D  + ++  P+  EA+  RG   A  G+  EA +D S+A+E  P  A+  + RG+  
Sbjct: 573 AIADLDKTLRLFPNFAEAYYNRGTLLALSGKLPEAFEDFSRAIELNPLFAEAFYNRGMTQ 632

Query: 494 FKFKDFNAAVEDLSACVKL 512
              KD      DLS   +L
Sbjct: 633 IYMKDTRKGCLDLSKAGEL 651


>gi|428212529|ref|YP_007085673.1| hypothetical protein Oscil6304_2088 [Oscillatoria acuminata PCC
           6304]
 gi|428000910|gb|AFY81753.1| TPR repeat-containing protein [Oscillatoria acuminata PCC 6304]
          Length = 1049

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 139/302 (46%), Gaps = 6/302 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  + + G    AI  F+Q +K +P    A   RG AR    + +  I+D+T+AI  N
Sbjct: 685 NRGAIRKDLGDVQGAIDDFNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKAIDLN 744

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG AR   G+   AI D +KA+E  P  A   + RG       D + A++D
Sbjct: 745 PQYADAYNNRGVARKDSGDLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDD 804

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K++ ++  AY   G+A +  G+   A     + I+++  +  A+ +     +D  
Sbjct: 805 YNQAIKINPQDAEAYVRRGIARAHSGDLPGAISDFTETIKINPQYALAYNNRGNARKDSG 864

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +   A++   Q + I+ + + AY+ RG      G    AI D +  + I+P   +  Y R
Sbjct: 865 DLAGAIDDYNQAIKINPQLALAYNNRGNARRNSGDLSGAISDFTEAIKINPQYADAYYNR 924

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE-----IALYT-ASKINSE 679
                 + +   AI D+  A+ +     + ++ + +     E     I+ +T A KIN +
Sbjct: 925 GVASSILEDMPGAISDFTEAIKINPQYADAYLNRGIVSSMSEDMPGAISDFTEAIKINPQ 984

Query: 680 FC 681
           + 
Sbjct: 985 YA 986



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 117/229 (51%), Gaps = 6/229 (2%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG A+ + G  + AI  ++Q +K +P   EA + RG ARA   +L  AISDFTE I+ N
Sbjct: 787  NRGYARKDSGDLSGAIDDYNQAIKINPQDAEAYVRRGIARAHSGDLPGAISDFTETIKIN 846

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    A+  RG AR   G+   AI D ++A++  P  A   + RG       D + A+ D
Sbjct: 847  PQYALAYNNRGNARKDSGDLAGAIDDYNQAIKINPQLALAYNNRGNARRNSGDLSGAISD 906

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQ 562
             +  +K++ +   AY   G+A S + +   A     +AI+++  + +A+   G ++   +
Sbjct: 907  FTEAIKINPQYADAYYNRGVASSILEDMPGAISDFTEAIKINPQYADAYLNRGIVSSMSE 966

Query: 563  DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            D+     A+    + + I+ +++ AY+ RG+  +     +  I+D+  G
Sbjct: 967  DMPG---AISDFTEAIKINPQYADAYYNRGVARYLSEDKQGGIEDIQKG 1012



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 124/256 (48%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG+A+ + G  + AI+ + + ++ +P+Y  A   RG AR    +L  AI D+ +AI+ N
Sbjct: 753  NRGVARKDSGDLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDDYNQAIKIN 812

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P   EA+ RRG ARA  G+   AI D ++ ++  P  A   + RG       D   A++D
Sbjct: 813  PQDAEAYVRRGIARAHSGDLPGAISDFTETIKINPQYALAYNNRGNARKDSGDLAGAIDD 872

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  +K++ +   AY   G A  + G+   A     +AI+++  + +A+ +       L 
Sbjct: 873  YNQAIKINPQLALAYNNRGNARRNSGDLSGAISDFTEAIKINPQYADAYYNRGVASSILE 932

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +   A+    + + I+ +++ AY  RG++         AI D +  + I+P   +  Y R
Sbjct: 933  DMPGAISDFTEAIKINPQYADAYLNRGIVSSMSEDMPGAISDFTEAIKINPQYADAYYNR 992

Query: 626  ASCYHAIGEYREAIKD 641
                +   + +  I+D
Sbjct: 993  GVARYLSEDKQGGIED 1008



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 160/357 (44%), Gaps = 29/357 (8%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG A+   G +   I+ + + +  +P Y +A   RG AR    +L  AI+D+T+AI+ N
Sbjct: 719  NRGNARKESGDWQGVIADYTKAIDLNPQYADAYNNRGVARKDSGDLSGAIADYTKAIELN 778

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    A+  RG AR   G+   AI D ++A++  P  A+    RGI      D   A+ D
Sbjct: 779  PLYAGAYYNRGYARKDSGDLSGAIDDYNQAIKINPQDAEAYVRRGIARAHSGDLPGAISD 838

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             +  +K++ +   AY   G A    G+   A + + +AI+++     A+ +     ++  
Sbjct: 839  FTETIKINPQYALAYNNRGNARKDSGDLAGAIDDYNQAIKINPQLALAYNNRGNARRNSG 898

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +   A+    + + I+ +++ AY+ RG+    L     AI D +  + I+P   +    R
Sbjct: 899  DLSGAISDFTEAIKINPQYADAYYNRGVASSILEDMPGAISDFTEAIKINPQYADAYLNR 958

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
                    +   AI D+  A+ +     +       A+Y + +A Y +          D 
Sbjct: 959  GIVSSMSEDMPGAISDFTEAIKINPQYAD-------AYYNRGVARYLSE---------DK 1002

Query: 686  DGDIDPLFK--EYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALL 740
             G I+ + K  +  C++  P+  C++       +D+LK+ ++ R   S   QK  L+
Sbjct: 1003 QGGIEDIQKGEQLLCQQGKPE--CQQA------KDALKQIEVGR---SGVGQKNNLI 1048



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 114/234 (48%), Gaps = 14/234 (5%)

Query: 291  ASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRS---- 346
            A  N  + R+ +G  D+   +   + ++  +  ++E+Y +  I+   S D   + S    
Sbjct: 784  AYYNRGYARKDSG--DLSGAIDDYNQAIKINPQDAEAYVRRGIARAHSGDLPGAISDFTE 841

Query: 347  --KLSFKWDMLKETSNEAKRNKKFCVTRISK-SKSISVDFRLS-----RGIAQVNEGKYA 398
              K++ ++ +       A+++       I   +++I ++ +L+     RG A+ N G  +
Sbjct: 842  TIKINPQYALAYNNRGNARKDSGDLAGAIDDYNQAIKINPQLALAYNNRGNARRNSGDLS 901

Query: 399  SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
             AIS F + +K +P Y +A   RG A +   ++  AISDFTEAI+ NP   +A+  RG  
Sbjct: 902  GAISDFTEAIKINPQYADAYYNRGVASSILEDMPGAISDFTEAIKINPQYADAYLNRGIV 961

Query: 459  RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             +   +   AI D ++A++  P  AD  + RG+  +  +D    +ED+    +L
Sbjct: 962  SSMSEDMPGAISDFTEAIKINPQYADAYYNRGVARYLSEDKQGGIEDIQKGEQL 1015



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 3/254 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGR-GTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y  A++  DQ ++         + R G   A  R  EA ++ +T AI   P +  A+  
Sbjct: 628 QYPQALASIDQAIQRQNQDAVLYMFRAGILSALNRYQEA-VAAYTIAIDITPHS-WAYNN 685

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG  R  LG+   AI D ++A++  P + +  + RG    +  D+   + D +  + L+ 
Sbjct: 686 RGAIRKDLGDVQGAIDDFNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKAIDLNP 745

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   AY   G+A    G+   A   + KAI+L+  +  A+ +     +D  +   A++  
Sbjct: 746 QYADAYNNRGVARKDSGDLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDDY 805

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + I+ + ++AY  RG+     G    AI D +  + I+P        R +     G+
Sbjct: 806 NQAIKINPQDAEAYVRRGIARAHSGDLPGAISDFTETIKINPQYALAYNNRGNARKDSGD 865

Query: 635 YREAIKDYDAALDL 648
              AI DY+ A+ +
Sbjct: 866 LAGAIDDYNQAIKI 879



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 113/257 (43%), Gaps = 1/257 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A     +   A+  F+Q +  D    EA   +G +  F ++   A++   +AIQ  
Sbjct: 584 ARGLALSAADRDREAVWSFEQAIVIDNTPHEAWREQGKSLLFLKQYPQALASIDQAIQRQ 643

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                 +  R    +AL    EA+   + A++  P+S    + RG +     D   A++D
Sbjct: 644 NQDAVLYMFRAGILSALNRYQEAVAAYTIAIDITPHSW-AYNNRGAIRKDLGDVQGAIDD 702

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K++ +N +AY   G A    G+++     + KAI L+  + +A+ +     +D  
Sbjct: 703 FNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKAIDLNPQYADAYNNRGVARKDSG 762

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +   A+    + + ++  ++ AY+ RG      G    AI D +  + I+P + E    R
Sbjct: 763 DLSGAIADYTKAIELNPLYAGAYYNRGYARKDSGDLSGAIDDYNQAIKINPQDAEAYVRR 822

Query: 626 ASCYHAIGEYREAIKDY 642
                  G+   AI D+
Sbjct: 823 GIARAHSGDLPGAISDF 839



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 114/269 (42%), Gaps = 8/269 (2%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI  F +AI  N ++  AW  RG A +A     EA+    +A+  +    +   E+G 
Sbjct: 562 EQAIEAFNQAIHLNRNSYAAWYARGLALSAADRDREAVWSFEQAIVIDNTPHEAWREQGK 621

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                K +  A+  +   ++   ++   Y +    LS++  Y++A  A+  AI +  +  
Sbjct: 622 SLLFLKQYPQALASIDQAIQRQNQDAVLYMFRAGILSALNRYQEAVAAYTIAIDITPHSW 681

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A+ +     +DL + + A++   Q + I+ + + AY+ RG      G  +  I D +  
Sbjct: 682 -AYNNRGAIRKDLGDVQGAIDDFNQAIKINPQNTNAYYNRGNARKESGDWQGVIADYTKA 740

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           + ++P   +    R       G+   AI DY  A++L         L   A+Y +  A  
Sbjct: 741 IDLNPQYADAYNNRGVARKDSGDLSGAIADYTKAIELN-------PLYAGAYYNRGYARK 793

Query: 672 TASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            +  ++     ++    I+P   E + +R
Sbjct: 794 DSGDLSGAIDDYNQAIKINPQDAEAYVRR 822



 Score = 43.5 bits (101), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 10/159 (6%)

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           KF D  AA+                +   G  L  +G  ++A EA  +AI L+RN   AW
Sbjct: 523 KFVDMIAALAVTQKTAPKQDATARDWINYGNQLWRVGRSEQAIEAFNQAIHLNRNSYAAW 582

Query: 555 GHLTQFYQDLANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
                + + LA S      +A+   +Q + ID    +A+  +G  L  L Q+ +A+  + 
Sbjct: 583 -----YARGLALSAADRDREAVWSFEQAIVIDNTPHEAWREQGKSLLFLKQYPQALASID 637

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             +     +      RA    A+  Y+EA+  Y  A+D+
Sbjct: 638 QAIQRQNQDAVLYMFRAGILSALNRYQEAVAAYTIAIDI 676



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 5/124 (4%)

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           +  SE+A+E   Q +++++    A++ RGL L    + ++A+      + ID +  E   
Sbjct: 558 VGRSEQAIEAFNQAIHLNRNSYAAWYARGLALSAADRDREAVWSFEQAIVIDNTPHEAWR 617

Query: 624 LRASCYHAIGEYREAIKDYDAAL-----DLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
            +      + +Y +A+   D A+     D  L      +L  L  YQ+ +A YT +   +
Sbjct: 618 EQGKSLLFLKQYPQALASIDQAIQRQNQDAVLYMFRAGILSALNRYQEAVAAYTIAIDIT 677

Query: 679 EFCW 682
              W
Sbjct: 678 PHSW 681


>gi|410099837|ref|ZP_11294805.1| hypothetical protein HMPREF1076_03983 [Parabacteroides goldsteinii
           CL02T12C30]
 gi|409217670|gb|EKN10645.1| hypothetical protein HMPREF1076_03983 [Parabacteroides goldsteinii
           CL02T12C30]
          Length = 701

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 142/318 (44%), Gaps = 7/318 (2%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           F    ++ S  I+ D  L+ G   +    Y  +I  F+Q++K  P   E    R  A+  
Sbjct: 2   FVAYSLAMSAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKAKPWIAEPYFYRAVAKIN 61

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
             + + A  D T  +Q NP   +A+  RG AR +  +  EAI D  K LEF+P    +L 
Sbjct: 62  LDDYKGAEEDCTLCLQRNPFLVQAYYARGIARQSQEKYAEAIADYDKGLEFKPEDRQMLV 121

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            + + N + KD++ A +     +K   +    Y   G   +  G+  KA   + KAI++D
Sbjct: 122 NKAVANIQRKDYDDAEKTFDVLMKAHPKYSMNYLTRGAMYTEKGDTVKALADYNKAIEMD 181

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
             +  ++G+         + + AL  L + + ++ R S  Y  RGL+ + +   + A+ D
Sbjct: 182 PYYAPSYGNRAILLYQTNDLKGALADLNEAIRLNTRESGYYINRGLVRYQMNDLRGAMDD 241

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
               +G+D +N+   + R    + +G+   AI+D+D  +  E D+        +A+Y + 
Sbjct: 242 YDQVIGMDKNNLIARFNRGLLRYQVGDNNRAIEDFDVVIQQEPDN-------YMAYYNRA 294

Query: 668 IALYTASKINSEFCWFDI 685
           +  +           FD+
Sbjct: 295 LLRFETGDYRGSVQDFDV 312



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 131/267 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+ ++ KYA AI+ +D+ L+  P   + L+ +  A   +++ + A   F   ++++
Sbjct: 88  ARGIARQSQEKYAEAIADYDKGLEFKPEDRQMLVNKAVANIQRKDYDDAEKTFDVLMKAH 147

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG      G++V+A+ D +KA+E +P  A     R I+ ++  D   A+ D
Sbjct: 148 PKYSMNYLTRGAMYTEKGDTVKALADYNKAIEMDPYYAPSYGNRAILLYQTNDLKGALAD 207

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L+  ++L+      Y   GL    + + + A + + + I +D+N L A  +       + 
Sbjct: 208 LNEAIRLNTRESGYYINRGLVRYQMNDLRGAMDDYDQVIGMDKNNLIARFNRGLLRYQVG 267

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           ++ +A+E    V+  +     AY+ R LL    G ++ +++D    LG  P+     Y R
Sbjct: 268 DNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGSVQDFDVVLGQYPNFTPGYYSR 327

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDS 652
           +     + +   A +DY  A+++E +S
Sbjct: 328 SEAKRKMNDQVGADRDYWTAIEMENNS 354



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 45/75 (60%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +D +++ +P +  A   RG  R  QR+  AAI D+ EAI+ +P   EA+  RG A  +LG
Sbjct: 612 YDMVIRLNPGFVYAYFNRGNLRCVQRDFRAAIQDYDEAIKRDPDFAEAYFNRGLAHLSLG 671

Query: 464 ESVEAIQDLSKALEF 478
           ++ + I DLSKA E 
Sbjct: 672 DANQGIADLSKAGEL 686



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 124/290 (42%), Gaps = 33/290 (11%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R +RG+ +   G    AI  FD +++++P    A   R   R    +   ++ DF   + 
Sbjct: 256 RFNRGLLRYQVGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGSVQDFDVVLG 315

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS------ADILHERGIVNFKFK 497
             P+    +  R +A+  + + V A +D   A+E E NS      A   +     N   +
Sbjct: 316 QYPNFTPGYYSRSEAKRKMNDQVGADRDYWTAIEMENNSKKDRQSAQGGNAMASTNTTGQ 375

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE-EAHLKAIQLDRNF---LEA 553
           D NA+  D       +K +K+   +  L +    E ++ + ++ ++    DRN    +E 
Sbjct: 376 DSNASSSDDKGENTREKSDKNISKFNRLVVYDKEEERRNKYQSDVRGRVQDRNVRVDIEP 435

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL--------------G 599
              LT +        + ++ +++++Y DK   + Y+ R +L   L               
Sbjct: 436 QFVLTYY--------EKIDPIKKIVYYDKTIEE-YNARMVLSRKLRITNEEAALTEDQIS 486

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            H  +I D S+ +   P N +  + RA  Y  + ++ EAIKD++  ++L+
Sbjct: 487 VHFASINDYSAKIEAQPGNADAWFGRAVDYMLVQDFTEAIKDFNKVIELD 536



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 23/202 (11%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           A+I+D++  I++ P   +AW  R      + +  EAI+D +K +E +P        R +V
Sbjct: 490 ASINDYSAKIEAQPGNADAWFGRAVDYMLVQDFTEAIKDFNKVIELDPTYTMAYFNRAVV 549

Query: 493 NFKFKDFNAA----VEDLSACV-----KLDKENKSAYTYLGLALSSIGEYKKAEEAHL-- 541
            +K   ++ +     +DLSA +     K+ +             + + + +KA E  L  
Sbjct: 550 RYKQLVYDMSQTTTTDDLSASMGSMNFKMGQSPTQPKAPSDPRSAEVKDKRKAYEHELIT 609

Query: 542 ----KAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
                 I+L+  F+ A+   G+L    +D      A++   + +  D  F++AY  RGL 
Sbjct: 610 RDYDMVIRLNPGFVYAYFNRGNLRCVQRDF---RAAIQDYDEAIKRDPDFAEAYFNRGLA 666

Query: 595 LHGLGQHKKAIKDLSSG--LGI 614
              LG   + I DLS    LGI
Sbjct: 667 HLSLGDANQGIADLSKAGELGI 688



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P  P +   +   +A++ EL     D+   I+ NP    A+  RG  R    +   AIQD
Sbjct: 588 PSDPRSAEVKDKRKAYEHEL--ITRDYDMVIRLNPGFVYAYFNRGNLRCVQRDFRAAIQD 645

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             +A++ +P+ A+    RG+ +    D N  + DLS   +L
Sbjct: 646 YDEAIKRDPDFAEAYFNRGLAHLSLGDANQGIADLSKAGEL 686


>gi|27376419|ref|NP_767948.1| hypothetical protein blr1308 [Bradyrhizobium japonicum USDA 110]
 gi|27349559|dbj|BAC46573.1| blr1308 [Bradyrhizobium japonicum USDA 110]
          Length = 458

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 138/290 (47%), Gaps = 5/290 (1%)

Query: 331 SSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
           S+I D  ++ S++  + L  + D    TS    +  +     I+     +  +RL   + 
Sbjct: 54  SAIIDQAANSSSDRAAALLVRADANARTSGGLTQALRDIDRAIALDGKNAKAWRLRGDLL 113

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           +   G    A +   + ++ DP   E+   RG     QR L+ A++D+ +AI+  P   +
Sbjct: 114 REAGGDLNRAAADLSKAIELDPQDAESYELRGVVYTSQRRLDRALADYDQAIKLKPGDAQ 173

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           AW  RG      G++ +AI+DLS+AL  +PN       RG    K    + +V D +  +
Sbjct: 174 AWSDRGVTYYLGGDNEKAIRDLSEALRLDPNRPRTYTNRGAAYKKLGQLDKSVADAAEAI 233

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQDLANSE 568
           +LD +    Y   GL+L+++G+Y KA   + +A++L    NF    G   QF  +     
Sbjct: 234 RLDPKVPEYYDNRGLSLAAMGDYDKAIADYDQALRLAPKPNFFTNRGDSYQFKGEFG--- 290

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            AL   +  L +D  F++ Y+ R +L   +G+ +KA+ D  + L +DP N
Sbjct: 291 AALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALKLDPGN 340



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 1/187 (0%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           G   +A++D+ +A+  +  +A     RG ++     D N A  DLS  ++LD ++  +Y 
Sbjct: 83  GGLTQALRDIDRAIALDGKNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAESYE 142

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G+  +S     +A   + +AI+L     +AW      Y    ++EKA+  L + L +D
Sbjct: 143 LRGVVYTSQRRLDRALADYDQAIKLKPGDAQAWSDRGVTYYLGGDNEKAIRDLSEALRLD 202

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
               + Y  RG     LGQ  K++ D +  + +DP   E    R     A+G+Y +AI D
Sbjct: 203 PNRPRTYTNRGAAYKKLGQLDKSVADAAEAIRLDPKVPEYYDNRGLSLAAMGDYDKAIAD 262

Query: 642 YDAALDL 648
           YD AL L
Sbjct: 263 YDQALRL 269



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 502 AVEDLSACVKLDKENKSAYTYLG-LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           A+ D+   + LD +N  A+   G L   + G+  +A     KAI+LD    E++      
Sbjct: 88  ALRDIDRAIALDGKNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAESYELRGVV 147

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y      ++AL    Q + +    ++A+  RG+  +  G ++KAI+DLS  L +DP+   
Sbjct: 148 YTSQRRLDRALADYDQAIKLKPGDAQAWSDRGVTYYLGGDNEKAIRDLSEALRLDPNRPR 207

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TAS 674
               R + Y  +G+  +++ D   A+ L+    E +      L  +  Y K IA Y  A 
Sbjct: 208 TYTNRGAAYKKLGQLDKSVADAAEAIRLDPKVPEYYDNRGLSLAAMGDYDKAIADYDQAL 267

Query: 675 KINSEFCWFDIDGD 688
           ++  +  +F   GD
Sbjct: 268 RLAPKPNFFTNRGD 281



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG++    G Y  AI+ +DQ L+  P  P     RG +  F+ E  AA+SD+  A++ +
Sbjct: 245 NRGLSLAAMGDYDKAIADYDQALRLAPK-PNFFTNRGDSYQFKGEFGAALSDYESALKLD 303

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           P+  + +  R      +GE  +A+ D   AL+ +P + +  + R
Sbjct: 304 PNFAQTYNNRAVLYKKMGERRKALADYETALKLDPGNDNAANGR 347



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 1/134 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G+   +++   + ++ DP  PE    RG + A   + + AI+D+ +A++  
Sbjct: 211 NRGAAYKKLGQLDKSVADAAEAIRLDPKVPEYYDNRGLSLAAMGDYDKAIADYDQALRLA 270

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG +    GE   A+ D   AL+ +PN A   + R ++  K  +   A+ D
Sbjct: 271 PKP-NFFTNRGDSYQFKGEFGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALAD 329

Query: 506 LSACVKLDKENKSA 519
               +KLD  N +A
Sbjct: 330 YETALKLDPGNDNA 343


>gi|428210653|ref|YP_007083797.1| hypothetical protein Oscil6304_0120 [Oscillatoria acuminata PCC
           6304]
 gi|427999034|gb|AFY79877.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
          Length = 995

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 1/269 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG  Q   G +  A++ +++ ++    YP+A   RG A+    + E AI+ F EAI    
Sbjct: 67  RGKEQFYRGNFTDALASWNEAIRLKRDYPDAYYLRGVAQGQLGQKEDAIASFNEAIHFKR 126

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG A+  LG++ +AI   ++A+  +PN  D  + RG+V  +      A+   
Sbjct: 127 DFPDAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQKEDAIASF 186

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD-LA 565
           +  + L      AY   GL  S +G+Y+ A  +  +AI+L  +F +A+ H      D L 
Sbjct: 187 NEAICLKPNFSDAYYLRGLTQSQLGQYEDAIASFNEAIRLKPDFPDAYFHRGIVLCDHLK 246

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E A+    + +     F  AY  RG+    LGQ++ AI   +  + + P      + R
Sbjct: 247 QYEDAIASFNEAIRFKSDFDTAYCNRGVAQRNLGQYEDAIASFNEAIRLKPDFSYAYFKR 306

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSME 654
                 + +Y +AI  +D+ L L+ D+ +
Sbjct: 307 GVAQSKLRQYEDAIASFDSGLTLKRDAWQ 335



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 1/174 (0%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG+AQ   G+   AI+ F++ +   P +P+A   RG  +    + E AI+ F EA
Sbjct: 130 DAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQKEDAIASFNEA 189

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF-KFKDFN 500
           I   P+  +A+  RG  ++ LG+  +AI   ++A+  +P+  D    RGIV     K + 
Sbjct: 190 ICLKPNFSDAYYLRGLTQSQLGQYEDAIASFNEAIRLKPDFPDAYFHRGIVLCDHLKQYE 249

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            A+   +  ++   +  +AY   G+A  ++G+Y+ A  +  +AI+L  +F  A+
Sbjct: 250 DAIASFNEAIRFKSDFDTAYCNRGVAQRNLGQYEDAIASFNEAIRLKPDFSYAY 303



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 101/207 (48%), Gaps = 7/207 (3%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           + A+ L++RG   F   +F  A+   +  ++L ++   AY   G+A   +G+ + A  + 
Sbjct: 59  DEAEELYQRGKEQFYRGNFTDALASWNEAIRLKRDYPDAYYLRGVAQGQLGQKEDAIASF 118

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI   R+F +A+ +       L  ++ A+    + + +   F  AY+ RG++   LGQ
Sbjct: 119 NEAIHFKRDFPDAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQ 178

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF---- 656
            + AI   +  + + P+  +  YLR      +G+Y +AI  ++ A+ L+ D  + +    
Sbjct: 179 KEDAIASFNEAICLKPNFSDAYYLRGLTQSQLGQYEDAIASFNEAIRLKPDFPDAYFHRG 238

Query: 657 VLQC--LAFYQKEIALYT-ASKINSEF 680
           ++ C  L  Y+  IA +  A +  S+F
Sbjct: 239 IVLCDHLKQYEDAIASFNEAIRFKSDF 265



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 3/200 (1%)

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           +RG+ +   G   +A+   ++A+  + +  D  + RG+   +      A+   +  +   
Sbjct: 66  QRGKEQFYRGNFTDALASWNEAIRLKRDYPDAYYLRGVAQGQLGQKEDAIASFNEAIHFK 125

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
           ++   AY   G+A   +G+ K A  +  +AI L  NF +A+ +       L   E A+  
Sbjct: 126 RDFPDAYYNRGVAQGQLGQNKDAIASFNEAICLKPNFPDAYYNRGVVQGQLGQKEDAIAS 185

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS--CYHA 631
             + + +   FS AY+LRGL    LGQ++ AI   +  + + P   +  + R    C H 
Sbjct: 186 FNEAICLKPNFSDAYYLRGLTQSQLGQYEDAIASFNEAIRLKPDFPDAYFHRGIVLCDH- 244

Query: 632 IGEYREAIKDYDAALDLELD 651
           + +Y +AI  ++ A+  + D
Sbjct: 245 LKQYEDAIASFNEAIRFKSD 264



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+AQ N G+Y  AI+ F++ ++  P +  A   RG A++  R+ E AI+ F   +   
Sbjct: 271 NRGVAQRNLGQYEDAIASFNEAIRLKPDFSYAYFKRGVAQSKLRQYEDAIASFDSGLTLK 330

Query: 446 PSAGEAWKRRGQARAAL 462
             A + W  RG A   L
Sbjct: 331 RDAWQDWGNRGDAAGML 347


>gi|296127342|ref|YP_003634594.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019158|gb|ADG72395.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 352

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 124/233 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+GI +   G+YA AI  +D+ +K +P   +A   +  A+     L+ AI ++ +AI+  
Sbjct: 103 SKGIYKSANGEYAEAIKYYDEAIKLNPNMSDAYYNKAIAKTKLGLLKEAIEEYDKAIELR 162

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               +A+  RG  ++ L    EAI+D  KAL  +PN  D  + +G++  +   F  A++D
Sbjct: 163 ADYADAYYNRGLLKSDLVLLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKD 222

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K+   +   Y   G +  ++  Y++A + + KAI+L+ N+  A+ +      +L 
Sbjct: 223 FNKAIKISDNDAVIYNNRGNSKYNLELYEEAIKDYDKAIKLNPNYALAYNNRGNAKDNLG 282

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
             E+A+E   + + +   ++ AY+ RGL    LG +++A+KD    L +DP+N
Sbjct: 283 LYEEAIEDFDKAIKLKPDYADAYNNRGLTKENLGLYEEALKDYKKALKLDPNN 335



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 17/245 (6%)

Query: 424 ARAFQRELEAAISDFTEAIQS-----------------NPSAGEAWKRRGQARAALGESV 466
           A+ F  EL   ISD T  I S                 N +    +  +G  ++A GE  
Sbjct: 56  AKTFNEELNKIISDKTYLIGSFTNIVDNKKEVDIDRLNNLTDYHDYNSKGIYKSANGEYA 115

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           EAI+   +A++  PN +D  + + I   K      A+E+    ++L  +   AY   GL 
Sbjct: 116 EAIKYYDEAIKLNPNMSDAYYNKAIAKTKLGLLKEAIEEYDKAIELRADYADAYYNRGLL 175

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
            S +   ++A +   KA+ +D N  +A+ +      +L   ++A++   + + I    + 
Sbjct: 176 KSDLVLLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKAIKISDNDAV 235

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            Y+ RG   + L  +++AIKD    + ++P+       R +    +G Y EAI+D+D A+
Sbjct: 236 IYNNRGNSKYNLELYEEAIKDYDKAIKLNPNYALAYNNRGNAKDNLGLYEEAIEDFDKAI 295

Query: 647 DLELD 651
            L+ D
Sbjct: 296 KLKPD 300



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 11/111 (9%)

Query: 24  DELVRVDSVMASAI----TARIELAKLC-SLRNWSKAIRILDSLLAQSYEIQDICNRAFC 78
           DE ++++  M+ A      A+ +L  L  ++  + KAI  L +  A +Y      NR   
Sbjct: 122 DEAIKLNPNMSDAYYNKAIAKTKLGLLKEAIEEYDKAIE-LRADYADAY-----YNRGLL 175

Query: 79  YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
            S L L +  I+D DKAL +DP L  AY  KG   + LG  +EA+  + K 
Sbjct: 176 KSDLVLLEEAIKDFDKALSIDPNLFDAYNNKGVLENELGLFKEAIKDFNKA 226



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 6/82 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++++++KAI+I D+      +     NR      LEL++  I+D DKA++L+P    AY 
Sbjct: 219 AIKDFNKAIKISDN------DAVIYNNRGNSKYNLELYEEAIKDYDKAIKLNPNYALAYN 272

Query: 108 LKGCAFSALGRKEEALSVWEKG 129
            +G A   LG  EEA+  ++K 
Sbjct: 273 NRGNAKDNLGLYEEAIEDFDKA 294


>gi|34762717|ref|ZP_00143707.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27887616|gb|EAA24695.1| TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 558

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 7/245 (2%)

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           A   + E AI D+  AI+ NP+    +  RG+    L +  +AI D +KA++  PN  + 
Sbjct: 60  AVDDDFEKAIEDYNRAIELNPNNTSYYYNRGKVFYNLKKYKKAITDFNKAIKLNPNDKEY 119

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG   +    FN A+ D    + +  +N+  Y   G A +++G + KA     KAI+
Sbjct: 120 FYIRGSSYYNLNIFNKAIIDFDKAIMITSDNEDYYNSRGSAYANLGNFNKAIADFNKAIE 179

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           L+ NF +A+ +    Y  L N ++A+    + + ++      Y+ RGL  +    +K AI
Sbjct: 180 LNPNFSDAYNNRGITYAYLKNYKEAIVNFNKAIDLNPSDEGYYYNRGLAYNNFNNYKMAI 239

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            +    + ++P+       R   Y  +  Y+EAI ++D A+DL            LAF  
Sbjct: 240 INFDKAIELNPNFSVAYNNRGITYAYLKNYKEAIVNFDKAIDLNPS-------DSLAFNL 292

Query: 666 KEIAL 670
           KEI +
Sbjct: 293 KEITI 297



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 49/229 (21%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNF----------KFK-----DFNAAVEDLSACVKLD 513
           I++ SK +E  PN A   + RG   +          KF+     DF  A+ED +  ++L+
Sbjct: 20  IEEYSKKIEKNPNDASNYYNRGNAYYNRGNTFISLEKFQEAVDDDFEKAIEDYNRAIELN 79

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE-------AWGHLTQF------ 560
             N S Y   G    ++ +YKKA     KAI+L+ N  E       ++ +L  F      
Sbjct: 80  PNNTSYYYNRGKVFYNLKKYKKAITDFNKAIKLNPNDKEYFYIRGSSYYNLNIFNKAIID 139

Query: 561 ---------------------YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
                                Y +L N  KA+    + + ++  FS AY+ RG+    L 
Sbjct: 140 FDKAIMITSDNEDYYNSRGSAYANLGNFNKAIADFNKAIELNPNFSDAYNNRGITYAYLK 199

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            +K+AI + +  + ++PS+    Y R   Y+    Y+ AI ++D A++L
Sbjct: 200 NYKEAIVNFNKAIDLNPSDEGYYYNRGLAYNNFNNYKMAIINFDKAIEL 248



 Score = 44.7 bits (104), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 17/156 (10%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE 68
           S Y LN  +K I + D+ + + S       +R   +   +L N++KAI   +  +  +  
Sbjct: 126 SYYNLNIFNKAIIDFDKAIMITSDNEDYYNSR--GSAYANLGNFNKAIADFNKAIELNPN 183

Query: 69  IQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
             D   NR   Y+ L+ +K  I + +KA+ L+P+    Y  +G A++     + A+  ++
Sbjct: 184 FSDAYNNRGITYAYLKNYKEAIVNFNKAIDLNPSDEGYYYNRGLAYNNFNNYKMAIINFD 243

Query: 128 KGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEY 163
           K               +EL    + A  +R +T  Y
Sbjct: 244 KA--------------IELNPNFSVAYNNRGITYAY 265


>gi|434402863|ref|YP_007145748.1| hypothetical protein Cylst_0741 [Cylindrospermum stagnale PCC 7417]
 gi|428257118|gb|AFZ23068.1| hypothetical protein Cylst_0741 [Cylindrospermum stagnale PCC 7417]
          Length = 907

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 8/305 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A     +Y  A+   +Q L   P Y  AL  RG A    +E + A +DF ++I  +P 
Sbjct: 48  GLASFRLERYQEAVKYLNQALVIQPDYILALARRGMAYKQLKETQLADADFEQSIALSPQ 107

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             E W+ RG A   L    EAI    K +EF+P+     + RGI  +    +  A+    
Sbjct: 108 NAEDWRGRGLALDELERHEEAIASYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYD 167

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++   ++  A+   G+ L  +  Y+KA  ++ KAI+   N   AW +       L   
Sbjct: 168 KAIEFKPDDNIAWGSRGIVLYELERYEKAIASYDKAIEFKPNDDTAWNNRGNALYRLGRY 227

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+A+    + +        A++ RG  L  LG+ K+AI      +   P+  E  + R  
Sbjct: 228 EEAITSYDKAIEFKPDDDTAWNNRGNALFHLGRDKEAIASFDKAIEFKPNKDEAWFNRGK 287

Query: 628 CYHAIGEYREAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIALYTAS---KINSE 679
             + +G Y EAI  +D A++ +       + + FVL  L  Y++ IA Y  +   K +  
Sbjct: 288 ALNDLGRYEEAIASFDKAIEFKPGDHYAWNGQGFVLDDLGRYEEAIASYDKAIEFKPDYH 347

Query: 680 FCWFD 684
             WF+
Sbjct: 348 EAWFN 352



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 14/308 (4%)

Query: 369 CVTRISKSKSISVDFRLS---RGIA--QVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
            V  ++++  I  D+ L+   RG+A  Q+ E + A A   F+Q +   P   E   GRG 
Sbjct: 60  AVKYLNQALVIQPDYILALARRGMAYKQLKETQLADAD--FEQSIALSPQNAEDWRGRGL 117

Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
           A       E AI+ + + I+  P    AW  RG A  ALG   EAI    KA+EF+P+  
Sbjct: 118 ALDELERHEEAIASYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYDKAIEFKPDDN 177

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
                RGIV ++ + +  A+      ++    + +A+   G AL  +G Y++A  ++ KA
Sbjct: 178 IAWGSRGIVLYELERYEKAIASYDKAIEFKPNDDTAWNNRGNALYRLGRYEEAITSYDKA 237

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
           I+   +   AW +       L   ++A+    + +       +A+  RG  L+ LG++++
Sbjct: 238 IEFKPDDDTAWNNRGNALFHLGRDKEAIASFDKAIEFKPNKDEAWFNRGKALNDLGRYEE 297

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           AI      +   P +      +      +G Y EAI  YD A++ + D  E       A+
Sbjct: 298 AIASFDKAIEFKPGDHYAWNGQGFVLDDLGRYEEAIASYDKAIEFKPDYHE-------AW 350

Query: 664 YQKEIALY 671
           + + IAL+
Sbjct: 351 FNRGIALF 358



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 130/290 (44%), Gaps = 5/290 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +G  Q++ G Y +A + F Q +  +P  P+   G G A       + A+    +A+  
Sbjct: 11  LQQGNDQLDRGNYQAAFATFQQAVTLEPPNPQVFYGLGLASFRLERYQEAVKYLNQALVI 70

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A  RRG A   L E+  A  D  +++   P +A+    RG+   + +    A+ 
Sbjct: 71  QPDYILALARRGMAYKQLKETQLADADFEQSIALSPQNAEDWRGRGLALDELERHEEAIA 130

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++   ++ +A+   G+AL ++G Y++A  ++ KAI+   +   AWG       +L
Sbjct: 131 SYDKVIEFKPDDDTAWYNRGIALYALGRYEEAITSYDKAIEFKPDDNIAWGSRGIVLYEL 190

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              EKA+    + +        A++ RG  L+ LG++++AI      +   P +      
Sbjct: 191 ERYEKAIASYDKAIEFKPNDDTAWNNRGNALYRLGRYEEAITSYDKAIEFKPDDDTAWNN 250

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIA 669
           R +    +G  +EAI  +D A++ + +  E +      L  L  Y++ IA
Sbjct: 251 RGNALFHLGRDKEAIASFDKAIEFKPNKDEAWFNRGKALNDLGRYEEAIA 300



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 100/221 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA    G+Y  AI+ +D+ ++  P    A   RG         E AI+ + +AI+  
Sbjct: 148 NRGIALYALGRYEEAITSYDKAIEFKPDDNIAWGSRGIVLYELERYEKAIASYDKAIEFK 207

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   AW  RG A   LG   EAI    KA+EF+P+     + RG   F       A+  
Sbjct: 208 PNDDTAWNNRGNALYRLGRYEEAITSYDKAIEFKPDDDTAWNNRGNALFHLGRDKEAIAS 267

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++       A+   G AL+ +G Y++A  +  KAI+       AW        DL 
Sbjct: 268 FDKAIEFKPNKDEAWFNRGKALNDLGRYEEAIASFDKAIEFKPGDHYAWNGQGFVLDDLG 327

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
             E+A+    + +     + +A+  RG+ L  LG+ +KAIK
Sbjct: 328 RYEEAIASYDKAIEFKPDYHEAWFNRGIALFHLGREEKAIK 368



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 122/270 (45%), Gaps = 1/270 (0%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I+ S   + D+R  RG+A     ++  AI+ +D++++  P    A   RG A       E
Sbjct: 102 IALSPQNAEDWR-GRGLALDELERHEEAIASYDKVIEFKPDDDTAWYNRGIALYALGRYE 160

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI+ + +AI+  P    AW  RG     L    +AI    KA+EF+PN     + RG  
Sbjct: 161 EAITSYDKAIEFKPDDNIAWGSRGIVLYELERYEKAIASYDKAIEFKPNDDTAWNNRGNA 220

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
            ++   +  A+      ++   ++ +A+   G AL  +G  K+A  +  KAI+   N  E
Sbjct: 221 LYRLGRYEEAITSYDKAIEFKPDDDTAWNNRGNALFHLGRDKEAIASFDKAIEFKPNKDE 280

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           AW +  +   DL   E+A+    + +        A++ +G +L  LG++++AI      +
Sbjct: 281 AWFNRGKALNDLGRYEEAIASFDKAIEFKPGDHYAWNGQGFVLDDLGRYEEAIASYDKAI 340

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDY 642
              P   E  + R      +G   +AIK +
Sbjct: 341 EFKPDYHEAWFNRGIALFHLGREEKAIKSW 370


>gi|428298611|ref|YP_007136917.1| hypothetical protein Cal6303_1911 [Calothrix sp. PCC 6303]
 gi|428235155|gb|AFZ00945.1| Tetratricopeptide TPR_2 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 1338

 Score =  106 bits (264), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 21/303 (6%)

Query: 367 KFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
           K  +    KS  +  D+    L+R +    +G+Y  AI+ FD++++  P   EA  GR  
Sbjct: 428 KEAIASYEKSIVVKPDYYKAWLNRAVILAEQGRYDDAIASFDKVIEIHPEANEAWSGRSL 487

Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
           A     ++  AI  + +  +  P   E W  RG A A   +  EA+    +A+E +P  +
Sbjct: 488 ALLKLGKIPEAIYSYDQTTRLQPYDPENWYHRGVALAENQQYAEAVTSFDEAIEIQPEQS 547

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH--- 540
            I H+RG+     + +  AV      +K    N   +   G AL   G+Y++A  ++   
Sbjct: 548 IIWHQRGLSQLHLQRWEDAVISFQKALKSQPGNHELWYLRGNALEKSGQYQQAIASYDNA 607

Query: 541 ------LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
                 L A+ +DR  ++A  HL Q+Y+ + +  KALE       I+     A+  + + 
Sbjct: 608 LELNPSLHAVWIDRGVIQA--HLQQWYEAIVSWNKALE-------IEPNLYLAWFNQAIA 658

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
              LG+ ++AI      L I+P+     Y R     + GE   AI  YD AL ++ D  E
Sbjct: 659 WEKLGETQEAIASYDCALNIEPNFHTAWYNRGVLLASQGELEAAILSYDYALQIQSDYWE 718

Query: 655 KFV 657
            ++
Sbjct: 719 AWL 721



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 8/250 (3%)

Query: 406 QILKEDPMYPEALIGRGTARAFQR-------ELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           Q+  + P +P A IGR  A  +Q        +L  AI+ +  AI   P A E W  RG A
Sbjct: 362 QVFIDAPPHPSA-IGRAQAWFYQALKQAKFGDLNGAIASYDTAISITPDAYEYWFNRGLA 420

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
              LG   EAI    K++  +P+       R ++  +   ++ A+      +++  E   
Sbjct: 421 LFHLGYIKEAIASYEKSIVVKPDYYKAWLNRAVILAEQGRYDDAIASFDKVIEIHPEANE 480

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
           A++   LAL  +G+  +A  ++ +  +L     E W H      +     +A+    + +
Sbjct: 481 AWSGRSLALLKLGKIPEAIYSYDQTTRLQPYDPENWYHRGVALAENQQYAEAVTSFDEAI 540

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            I    S  +H RGL    L + + A+      L   P N E  YLR +     G+Y++A
Sbjct: 541 EIQPEQSIIWHQRGLSQLHLQRWEDAVISFQKALKSQPGNHELWYLRGNALEKSGQYQQA 600

Query: 639 IKDYDAALDL 648
           I  YD AL+L
Sbjct: 601 IASYDNALEL 610



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 132/321 (41%), Gaps = 41/321 (12%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           + ++  +RG+A  + G    AI+ +++ +   P Y +A + R    A Q   + AI+ F 
Sbjct: 410 AYEYWFNRGLALFHLGYIKEAIASYEKSIVVKPDYYKAWLNRAVILAEQGRYDDAIASFD 469

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           + I+ +P A EAW  R  A   LG+  EAI    +    +P   +  + RG+   + + +
Sbjct: 470 KVIEIHPEANEAWSGRSLALLKLGKIPEAIYSYDQTTRLQPYDPENWYHRGVALAENQQY 529

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             AV      +++  E    +   GL+                  QL         HL +
Sbjct: 530 AEAVTSFDEAIEIQPEQSIIWHQRGLS------------------QL---------HLQR 562

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           +       E A+   Q+ L       + ++LRG  L   GQ+++AI    + L ++PS  
Sbjct: 563 W-------EDAVISFQKALKSQPGNHELWYLRGNALEKSGQYQQAIASYDNALELNPSLH 615

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSE 679
                R      + ++ EAI  ++ AL++E +         LA++ + IA     +    
Sbjct: 616 AVWIDRGVIQAHLQQWYEAIVSWNKALEIEPNLY-------LAWFNQAIAWEKLGETQEA 668

Query: 680 FCWFDIDGDIDPLFKEYWCKR 700
              +D   +I+P F   W  R
Sbjct: 669 IASYDCALNIEPNFHTAWYNR 689


>gi|186684702|ref|YP_001867898.1| serine/threonin protein kinase [Nostoc punctiforme PCC 73102]
 gi|186467154|gb|ACC82955.1| serine/threonine protein kinase with TPR repeats [Nostoc
           punctiforme PCC 73102]
          Length = 687

 Score =  106 bits (264), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 141/315 (44%), Gaps = 41/315 (13%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ + + G Y  A+  F+ +++ DP    A   RG       + E A +D ++AI  NP 
Sbjct: 317 GLDKYDAGNYEGAVKDFNHVIELDPKNALAYNKRGDTYYRLGDYEQAQADSSQAILLNPQ 376

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
            G A+  RG A + LG+  EAI D ++A++   + A   + RG+   + KD   A+ D S
Sbjct: 377 DGNAYFDRGFAFSELGKYKEAIADYTQAIKLNSDDAYAYYGRGLARVQLKDNKGAIGDFS 436

Query: 508 ACVKLDKENKSAY--------------------------------TYLGLALS-SIGEYK 534
             + L  +   AY                                 Y   AL+ SI + K
Sbjct: 437 KAIALKPQYTEAYLQRGIIRRRLRLKQGAIEDFDTVIKINPSDAKAYYQRALTQSINKQK 496

Query: 535 KAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
            A  + +  AI ++  ++EA+ +    + DL N  +A E    +L ID +F  AY  RG+
Sbjct: 497 YAALKDYTDAININPKYIEAYLNRGDVFSDLGNKIEATEDYNTILQIDPKFIAAYIHRGI 556

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
                G +K AI+D S  L +DP+NI     R + Y  +G  + A +DY  A+ +  ++ 
Sbjct: 557 HRFSFGDYKGAIEDYSEALKLDPNNIAAYNNRGNAYLELGNKKSANQDYSQAIAINANN- 615

Query: 654 EKFVLQCLAFYQKEI 668
                  LA+Y + +
Sbjct: 616 ------ALAYYNRGV 624



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 108/223 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RG+A+V       AI  F + +   P Y EA + RG  R   R  + AI DF   I+ N
Sbjct: 417 GRGLARVQLKDNKGAIGDFSKAIALKPQYTEAYLQRGIIRRRLRLKQGAIEDFDTVIKIN 476

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           PS  +A+ +R   ++   +   A++D + A+   P   +    RG V     +   A ED
Sbjct: 477 PSDAKAYYQRALTQSINKQKYAALKDYTDAININPKYIEAYLNRGDVFSDLGNKIEATED 536

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +++D +  +AY + G+   S G+YK A E + +A++LD N + A+ +    Y +L 
Sbjct: 537 YNTILQIDPKFIAAYIHRGIHRFSFGDYKGAIEDYSEALKLDPNNIAAYNNRGNAYLELG 596

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N + A +   Q + I+   + AY+ RG++       + AI D 
Sbjct: 597 NKKSANQDYSQAIAINANNALAYYNRGVIRTKQKNKQGAIADF 639



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           ++  L+RG    + G    A   ++ IL+ DP +  A I RG  R    + + AI D++E
Sbjct: 514 IEAYLNRGDVFSDLGNKIEATEDYNTILQIDPKFIAAYIHRGIHRFSFGDYKGAIEDYSE 573

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A++ +P+   A+  RG A   LG    A QD S+A+    N+A   + RG++  K K+  
Sbjct: 574 ALKLDPNNIAAYNNRGNAYLELGNKKSANQDYSQAIAINANNALAYYNRGVIRTKQKNKQ 633

Query: 501 AAVEDLSACVKL 512
            A+ D     KL
Sbjct: 634 GAIADFKKAAKL 645



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 81/169 (47%), Gaps = 2/169 (1%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N+   L++ G+  +   ++  AV+D +  ++LD +N  AY   G     +G+Y++A+   
Sbjct: 308 NAQKELYQEGLDKYDAGNYEGAVKDFNHVIELDPKNALAYNKRGDTYYRLGDYEQAQADS 367

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI L+     A+      + +L   ++A+    Q + ++   + AY+ RGL    L  
Sbjct: 368 SQAILLNPQDGNAYFDRGFAFSELGKYKEAIADYTQAIKLNSDDAYAYYGRGLARVQLKD 427

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE-AIKDYDAALDL 648
           +K AI D S  + + P   E  YL+          ++ AI+D+D  + +
Sbjct: 428 NKGAIGDFSKAIALKPQYTEA-YLQRGIIRRRLRLKQGAIEDFDTVIKI 475


>gi|390438475|ref|ZP_10226939.1| putative Calcium/calmodulin-dependent protein kinase [Microcystis
           sp. T1-4]
 gi|389838101|emb|CCI31063.1| putative Calcium/calmodulin-dependent protein kinase [Microcystis
           sp. T1-4]
          Length = 639

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 121/223 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           + G+ + N G    AI  F+Q ++ +P Y  A   RG+A++   +   AI+D+ +AI+ N
Sbjct: 387 NNGVDKYNLGDNQGAIKDFNQAIQINPDYANAYYDRGSAKSNLGDKLGAIADYNQAIKLN 446

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG A+  LG +  AI D ++A++ +P+ A+    RG+   +  D   A++D
Sbjct: 447 PDDADAYISRGLAKYNLGHNQGAIADYNQAIKLKPDYANTYFWRGVAKSQLGDKQGAIKD 506

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +KL+ ++   Y   G A  ++G+ + A + + +AI+L+ +F   + +      +L 
Sbjct: 507 YNQAIKLNPDDADVYNNRGWAKYNLGDKQGAIKDYNQAIKLNPDFAFPYNNRGWAKYNLG 566

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           + + A+    Q + ++  F+  Y+ RGL+   L  ++KAIKD 
Sbjct: 567 DKQGAIADYNQAIKLNPDFAVPYYNRGLIYKELNDNEKAIKDF 609



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 127/260 (48%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           I   N G    AI+  +Q +K +     A    G  +    + + AI DF +AIQ NP  
Sbjct: 356 IGNYNLGDNQGAIADQNQAIKLNSDDAVAYHNNGVDKYNLGDNQGAIKDFNQAIQINPDY 415

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
             A+  RG A++ LG+ + AI D ++A++  P+ AD    RG+  +       A+ D + 
Sbjct: 416 ANAYYDRGSAKSNLGDKLGAIADYNQAIKLNPDDADAYISRGLAKYNLGHNQGAIADYNQ 475

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            +KL  +  + Y + G+A S +G+ + A + + +AI+L+ +  + + +      +L + +
Sbjct: 476 AIKLKPDYANTYFWRGVAKSQLGDKQGAIKDYNQAIKLNPDDADVYNNRGWAKYNLGDKQ 535

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A++   Q + ++  F+  Y+ RG   + LG  + AI D +  + ++P      Y R   
Sbjct: 536 GAIKDYNQAIKLNPDFAFPYNNRGWAKYNLGDKQGAIADYNQAIKLNPDFAVPYYNRGLI 595

Query: 629 YHAIGEYREAIKDYDAALDL 648
           Y  + +  +AIKD+  A  L
Sbjct: 596 YKELNDNEKAIKDFRQASQL 615



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 105/191 (54%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A+ N G    AI+ ++Q +K +P   +A I RG A+      + AI+D+ +AI+  P
Sbjct: 422 RGSAKSNLGDKLGAIADYNQAIKLNPDDADAYISRGLAKYNLGHNQGAIADYNQAIKLKP 481

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG A++ LG+   AI+D ++A++  P+ AD+ + RG   +   D   A++D 
Sbjct: 482 DYANTYFWRGVAKSQLGDKQGAIKDYNQAIKLNPDDADVYNNRGWAKYNLGDKQGAIKDY 541

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +KL+ +    Y   G A  ++G+ + A   + +AI+L+ +F   + +    Y++L +
Sbjct: 542 NQAIKLNPDFAFPYNNRGWAKYNLGDKQGAIADYNQAIKLNPDFAVPYYNRGLIYKELND 601

Query: 567 SEKALECLQQV 577
           +EKA++  +Q 
Sbjct: 602 NEKAIKDFRQA 612



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 86/168 (51%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D  +SRG+A+ N G    AI+ ++Q +K  P Y      RG A++   + + AI D+ +
Sbjct: 450 ADAYISRGLAKYNLGHNQGAIADYNQAIKLKPDYANTYFWRGVAKSQLGDKQGAIKDYNQ 509

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI+ NP   + +  RG A+  LG+   AI+D ++A++  P+ A   + RG   +   D  
Sbjct: 510 AIKLNPDDADVYNNRGWAKYNLGDKQGAIKDYNQAIKLNPDFAFPYNNRGWAKYNLGDKQ 569

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            A+ D +  +KL+ +    Y   GL    + + +KA +   +A QL R
Sbjct: 570 GAIADYNQAIKLNPDFAVPYYNRGLIYKELNDNEKAIKDFRQASQLHR 617



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 66/129 (51%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+   G    AI  ++Q +K +P   +    RG A+    + + AI D+ +AI+ NP
Sbjct: 490 RGVAKSQLGDKQGAIKDYNQAIKLNPDDADVYNNRGWAKYNLGDKQGAIKDYNQAIKLNP 549

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG A+  LG+   AI D ++A++  P+ A   + RG++  +  D   A++D 
Sbjct: 550 DFAFPYNNRGWAKYNLGDKQGAIADYNQAIKLNPDFAVPYYNRGLIYKELNDNEKAIKDF 609

Query: 507 SACVKLDKE 515
               +L ++
Sbjct: 610 RQASQLHRQ 618



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 6/198 (3%)

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           I N+   D   A+ D +  +KL+ ++  AY   G+   ++G+ + A +   +AIQ++ ++
Sbjct: 356 IGNYNLGDNQGAIADQNQAIKLNSDDAVAYHNNGVDKYNLGDNQGAIKDFNQAIQINPDY 415

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+        +L +   A+    Q + ++   + AY  RGL  + LG ++ AI D + 
Sbjct: 416 ANAYYDRGSAKSNLGDKLGAIADYNQAIKLNPDDADAYISRGLAKYNLGHNQGAIADYNQ 475

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY-----Q 665
            + + P      + R      +G+ + AIKDY+ A+ L  D  + +  +  A Y     Q
Sbjct: 476 AIKLKPDYANTYFWRGVAKSQLGDKQGAIKDYNQAIKLNPDDADVYNNRGWAKYNLGDKQ 535

Query: 666 KEIALYT-ASKINSEFCW 682
             I  Y  A K+N +F +
Sbjct: 536 GAIKDYNQAIKLNPDFAF 553


>gi|443319283|ref|ZP_21048517.1| Flp pilus assembly protein TadD [Leptolyngbya sp. PCC 6406]
 gi|442781110|gb|ELR91216.1| Flp pilus assembly protein TadD [Leptolyngbya sp. PCC 6406]
          Length = 492

 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 138/308 (44%), Gaps = 34/308 (11%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   N G+Y +AI+ FD  + + P Y  A + RG A +     + AI   ++AI+ +
Sbjct: 72  NRGVDYFNRGEYVNAIADFDAAIVQQPDYAAAFMYRGAALSQLGRADEAIGSLSQAIRLD 131

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG A   LG   +A+ D+ +AL  +P        +G+V+ +  +  +A+ +
Sbjct: 132 PTLARAYLLRGTAYYELGNITQALVDVQEALIHDPELVSAYLYQGLVDTQIGNIESAIAN 191

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEE--------------AHL---------- 541
           LS  ++++ +N +AY   G A    G+Y+ A                AH+          
Sbjct: 192 LSEAIRINPQNLNAYILRGFAYDRAGDYRSAIADFTYVIENTRASGIAHVGRGVAHYHLG 251

Query: 542 ----------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
                      A++     +E + + +  Y      ++A+  L + +  D  F   Y  R
Sbjct: 252 NLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAIRDLDEAINRDTSFFAGYLNR 311

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G+L   +G H  AI DLS  L ++  +      R     A G  REA+ DY  AL L+ +
Sbjct: 312 GILHSSMGNHGSAIADLSRALELNGDSALAYRYRGDAQLARGNEREALLDYSQALALDPN 371

Query: 652 SMEKFVLQ 659
           + E + L+
Sbjct: 372 NPELYTLR 379



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 114/242 (47%), Gaps = 6/242 (2%)

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           +E P  P  L  RG     + E   AI+DF  AI   P    A+  RG A + LG + EA
Sbjct: 61  EEVPPSPVELYNRGVDYFNRGEYVNAIADFDAAIVQQPDYAAAFMYRGAALSQLGRADEA 120

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  LS+A+  +P  A     RG   ++  +   A+ D+   +  D E  SAY Y GL  +
Sbjct: 121 IGSLSQAIRLDPTLARAYLLRGTAYYELGNITQALVDVQEALIHDPELVSAYLYQGLVDT 180

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI--DKRFSK 586
            IG  + A     +AI+++   L A+  L  F  D A   ++   +    Y+  + R S 
Sbjct: 181 QIGNIESAIANLSEAIRINPQNLNAY-ILRGFAYDRAGDYRS--AIADFTYVIENTRASG 237

Query: 587 AYHL-RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
             H+ RG+  + LG    A +DL++ +   P  +E  Y R+  Y A G  + AI+D D A
Sbjct: 238 IAHVGRGVAHYHLGNLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAIRDLDEA 297

Query: 646 LD 647
           ++
Sbjct: 298 IN 299



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 123/268 (45%), Gaps = 2/268 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G Y SAI+ F  +++       A +GRG A      L  A  D   A++  P
Sbjct: 209 RGFAYDRAGDYRSAIADFTYVIENTRASGIAHVGRGVAHYHLGNLTDAERDLNTAVRYTP 268

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            A E +  R    AA G    AI+DL +A+  + +       RGI++    +  +A+ DL
Sbjct: 269 GAVEPYYNRSFVYAAQGRPQRAIRDLDEAINRDTSFFAGYLNRGILHSSMGNHGSAIADL 328

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  ++L+ ++  AY Y G A  + G  ++A   + +A+ LD N  E +    +      +
Sbjct: 329 SRALELNGDSALAYRYRGDAQLARGNEREALLDYSQALALDPNNPELYTLRGKVRFARGD 388

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI--ECLYL 624
              AL    Q +++   ++ AY  RG++   +G  ++A  DLS  + ++   +  +  Y 
Sbjct: 389 IPGALADYNQAIFLRPDYTAAYSARGMVYAQVGDSQRAYDDLSLVIAVEEGAVSPDVFYQ 448

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDS 652
           R      +G+   A +D + A +  L++
Sbjct: 449 RGMSRLRLGDRFGARQDLEQAANRYLET 476



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 78/157 (49%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +V+   +R      +G+   AI   D+ +  D  +    + RG   +      +AI+D +
Sbjct: 270 AVEPYYNRSFVYAAQGRPQRAIRDLDEAINRDTSFFAGYLNRGILHSSMGNHGSAIADLS 329

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            A++ N  +  A++ RG A+ A G   EA+ D S+AL  +PN+ ++   RG V F   D 
Sbjct: 330 RALELNGDSALAYRYRGDAQLARGNEREALLDYSQALALDPNNPELYTLRGKVRFARGDI 389

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D +  + L  +  +AY+  G+  + +G+ ++A
Sbjct: 390 PGALADYNQAIFLRPDYTAAYSARGMVYAQVGDSQRA 426



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 2/226 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG+A  + G    A    +  ++  P   E    R    A Q   + AI D  EAI  
Sbjct: 241 VGRGVAHYHLGNLTDAERDLNTAVRYTPGAVEPYYNRSFVYAAQGRPQRAIRDLDEAINR 300

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           + S    +  RG   +++G    AI DLS+ALE   +SA     RG       +   A+ 
Sbjct: 301 DTSFFAGYLNRGILHSSMGNHGSAIADLSRALELNGDSALAYRYRGDAQLARGNEREALL 360

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D S  + LD  N   YT  G    + G+   A   + +AI L  ++  A+      Y  +
Sbjct: 361 DYSQALALDPNNPELYTLRGKVRFARGDIPGALADYNQAIFLRPDYTAAYSARGMVYAQV 420

Query: 565 ANSEKALECLQQVLYIDKRF--SKAYHLRGLLLHGLGQHKKAIKDL 608
            +S++A + L  V+ +++       ++ RG+    LG    A +DL
Sbjct: 421 GDSQRAYDDLSLVIAVEEGAVSPDVFYQRGMSRLRLGDRFGARQDL 466



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 5/163 (3%)

Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N    +  +S++  ++ D  L+   RG AQ+  G    A+  + Q L  DP  PE    R
Sbjct: 320 NHGSAIADLSRALELNGDSALAYRYRGDAQLARGNEREALLDYSQALALDPNNPELYTLR 379

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G  R  + ++  A++D+ +AI   P    A+  RG   A +G+S  A  DLS  +  E  
Sbjct: 380 GKVRFARGDIPGALADYNQAIFLRPDYTAAYSARGMVYAQVGDSQRAYDDLSLVIAVEEG 439

Query: 482 --SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
             S D+ ++RG+   +  D   A +DL        E   A  Y
Sbjct: 440 AVSPDVFYQRGMSRLRLGDRFGARQDLEQAANRYLETGQAEPY 482



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 39/198 (19%)

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           P S   L+ RG+  F   ++  A+ D  A +    +  +A+ Y G ALS +G        
Sbjct: 64  PPSPVELYNRGVDYFNRGEYVNAIADFDAAIVQQPDYAAAFMYRGAALSQLGR------- 116

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
                                      +++A+  L Q + +D   ++AY LRG   + LG
Sbjct: 117 ---------------------------ADEAIGSLSQAIRLDPTLARAYLLRGTAYYELG 149

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
              +A+ D+   L  DP  +     +      IG    AI +   A+ +   ++  ++L+
Sbjct: 150 NITQALVDVQEALIHDPELVSAYLYQGLVDTQIGNIESAIANLSEAIRINPQNLNAYILR 209

Query: 660 CLAF-----YQKEIALYT 672
             A+     Y+  IA +T
Sbjct: 210 GFAYDRAGDYRSAIADFT 227


>gi|157872758|ref|XP_001684907.1| conserved hypothetical protein [Leishmania major strain Friedlin]
 gi|68127977|emb|CAJ06696.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 847

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 140/321 (43%), Gaps = 17/321 (5%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S + DF   RG+     G+  +AI ++ + L+  P + +AL  R            AI D
Sbjct: 407 SYAHDF-YQRGLEHRRRGELEAAIHMYTRALELSPTHFKALFNRAFCEDKLMNYTRAIED 465

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           +T A+  +P         G +    G    A Q  ++A+E +    D  H RG    K  
Sbjct: 466 YTAALDLDPRNPFTHYNLGISYDHKGNHARATQAFTRAIELDDRHPDFYHNRGFTQRKQG 525

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
            + AA+ D +  V LD ++  ++       S +G Y++A   +  A+Q+D N   A+ + 
Sbjct: 526 AYAAAIADYTTAVSLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAALQIDSNNANAYHNR 585

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                 L   E A+E   + L ++ + + A + RGL+   L Q+ KA+ D +  + +D  
Sbjct: 586 GAALAQLGRLEAAVEDFNRALRLNPKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQR 645

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT 672
           N   L+ R   Y  +G+   AI DY A++ L   S   +  +  AF     Y+  I  YT
Sbjct: 646 NSAWLHNRGYTYRNMGKLELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYEAAIEDYT 705

Query: 673 ---------ASKI--NSEFCW 682
                    A+K+  N  +C+
Sbjct: 706 KALREHPGVATKVLNNRAYCF 726



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 135/335 (40%), Gaps = 52/335 (15%)

Query: 360 NEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDP------- 412
           N A+  + F  TR  +      DF  +RG  Q  +G YA+AI+ +   +  DP       
Sbjct: 492 NHARATQAF--TRAIELDDRHPDFYHNRGFTQRKQGAYAAAIADYTTAVSLDPKHFKSHY 549

Query: 413 ----------MYPEALI-----------------GRGTARAFQRELEAAISDFTEAIQSN 445
                      Y EA+                   RG A A    LEAA+ DF  A++ N
Sbjct: 550 NRAYCFSKLGRYEEAVADYAAALQIDSNNANAYHNRGAALAQLGRLEAAVEDFNRALRLN 609

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A   RG     L +  +A+ D ++A+  +  ++  LH RG           A+ D
Sbjct: 610 PKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRNSAWLHNRGYTYRNMGKLELAIAD 669

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            SA +KL   + +AYT    A   +G Y+ A E + KA++      E  G  T+   + A
Sbjct: 670 YSASIKLAPHSHTAYTNRAFAFRKLGRYEAAIEDYTKALR------EHPGVATKVLNNRA 723

Query: 566 NS-------EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI---D 615
                    E A+    +VL  D   + A + RG+     G++  A+ D +  + +    
Sbjct: 724 YCFARLNLFEDAIRDYTEVLATDPVNAHALYNRGISFEKCGKYNAAVDDFTRAIRLAPEA 783

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           PS     Y R +    + +  +A +D   AL L+L
Sbjct: 784 PSTANSYYSRGTSRLQLHQVPQAAEDLKQALKLDL 818



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 35/66 (53%)

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            ++A   RG+    L Q K A+ D +  L   P +    Y RA+CY  + ++  AI DY+
Sbjct: 92  LTEALFYRGVCRARLSQVKDAVADFTDVLQRKPGHQRAHYERAACYARLDDFCSAIADYE 151

Query: 644 AALDLE 649
           AAL L+
Sbjct: 152 AALQLD 157



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           NRA+C+S+L  ++  + D   ALQ+D     AY  +G A + LGR E A+  + + 
Sbjct: 550 NRAYCFSKLGRYEEAVADYAAALQIDSNNANAYHNRGAALAQLGRLEAAVEDFNRA 605



 Score = 40.0 bits (92), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 15/110 (13%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE--------------DPMYPEALIGRGTARAFQR 429
           RL R  A V    YASA +  D  ++E              D +  EAL  RG  RA   
Sbjct: 49  RLLRAKAYVQLHDYASACADLDDWIQETDRIVHGISAGAAADSL-TEALFYRGVCRARLS 107

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           +++ A++DFT+ +Q  P    A   R    A L +   AI D   AL+ +
Sbjct: 108 QVKDAVADFTDVLQRKPGHQRAHYERAACYARLDDFCSAIADYEAALQLD 157


>gi|332708793|ref|ZP_08428764.1| hypothetical protein LYNGBM3L_32380 [Moorea producens 3L]
 gi|332352335|gb|EGJ31904.1| hypothetical protein LYNGBM3L_32380 [Moorea producens 3L]
          Length = 421

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 148/298 (49%), Gaps = 28/298 (9%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGI ++ +G    AI  FD+ L+ +P + EA   R  AR    + + A++D+T+A+Q N 
Sbjct: 8   RGIDKIRQGDLNEAIEEFDKALEINPNFAEAYYKRAMARFDLGDQQGALADYTQALQINS 67

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            + E +  RG AR ALG++  AI+D ++ L+  PN       +G    K  D  AA+   
Sbjct: 68  ESIEVYFGRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQAAIASF 127

Query: 507 --SACVKLDKENK--------------------------SAYTYLGLALSSIGEYKKAEE 538
             +A + LD+++K                          + + +  +   + G+Y++A E
Sbjct: 128 KQAAQLYLDQQDKLNCRRCLESINQIQQQQILALGRAQTNDFCHQAINKVNTGKYREALE 187

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
                +++D    +A+ +    +  L +  +A++ L Q + ++ + ++  + RGL+   L
Sbjct: 188 DFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMELNPQDAQVRYHRGLVRIEL 247

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           G ++ AI DL+  L  +P N + L  R + Y  +G+YR+AI+DY   + L+ +  + +
Sbjct: 248 GDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAIEDYSRVITLKPNDAQSY 305



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 11/191 (5%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           + I +VN GKY  A+  F+ +L+ DP   +A   RG       +   AI D  +A++ NP
Sbjct: 172 QAINKVNTGKYREALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMELNP 231

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +    RG  R  LG+   AI DL+K L+  P + D+L  RG    +  D+  A+ED 
Sbjct: 232 QDAQVRYHRGLVRIELGDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAIEDY 291

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L   +  +Y Y   A     + + A E + +A  L         +  Q  QD  N
Sbjct: 292 SRVITLKPNDAQSYRYRATAREKFEDLRGAFEDYQQAANL---------YFDQ--QDWTN 340

Query: 567 SEKALECLQQV 577
             K L+ L+Q+
Sbjct: 341 YRKLLDKLKQL 351



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 28/227 (12%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
           E +  RG  +   G+  EAI++  KALE  PN A+  ++R +  F   D   A+ D +  
Sbjct: 3   EEFYYRGIDKIRQGDLNEAIEEFDKALEINPNFAEAYYKRAMARFDLGDQQGALADYTQA 62

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           ++++ E+   Y   GLA  ++G+   A E   + ++++ N   A       Y+ L +++ 
Sbjct: 63  LQINSESIEVYFGRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQA 122

Query: 570 ALECLQQV--LYIDKR-----------FSKAYHLRGLLLH---------------GLGQH 601
           A+   +Q   LY+D++            ++    + L L                  G++
Sbjct: 123 AIASFKQAAQLYLDQQDKLNCRRCLESINQIQQQQILALGRAQTNDFCHQAINKVNTGKY 182

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           ++A++D +  L +DP N +    R   +  +G+YR AI+D   A++L
Sbjct: 183 REALEDFNWLLEVDPKNAQAYCYRGIVHCKLGDYRRAIQDLGQAMEL 229



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 9/202 (4%)

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           + Y G+     G+  +A E   KA++++ NF EA+        DL + + AL    Q L 
Sbjct: 5   FYYRGIDKIRQGDLNEAIEEFDKALEINPNFAEAYYKRAMARFDLGDQQGALADYTQALQ 64

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I+    + Y  RGL    LG    AI+D +  L I+P+      L+ S Y  +G+ + AI
Sbjct: 65  INSESIEVYFGRGLARLALGDATGAIEDANQILKINPNQPAACKLQGSAYRKLGDNQAAI 124

Query: 640 KDYDAALDLELDSMEKF----VLQCLAFYQKEIALYTASKINSEFCWFDID----GDIDP 691
             +  A  L LD  +K      L+ +   Q++  L       ++FC   I+    G    
Sbjct: 125 ASFKQAAQLYLDQQDKLNCRRCLESINQIQQQQILALGRAQTNDFCHQAINKVNTGKYRE 184

Query: 692 LFKEY-WCKRLHPKNVCEKVYR 712
             +++ W   + PKN     YR
Sbjct: 185 ALEDFNWLLEVDPKNAQAYCYR 206



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 51/110 (46%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R  RG+ ++  G Y  AI    ++L+ +P   + LI RG A     +   AI D++  I 
Sbjct: 237 RYHRGLVRIELGDYRGAIDDLTKLLQSNPENRDVLIHRGNAYIQMGDYRQAIEDYSRVIT 296

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
             P+  ++++ R  AR    +   A +D  +A     +  D  + R +++
Sbjct: 297 LKPNDAQSYRYRATAREKFEDLRGAFEDYQQAANLYFDQQDWTNYRKLLD 346


>gi|392408712|ref|YP_006445319.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
 gi|390621848|gb|AFM23055.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
          Length = 439

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 23/284 (8%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L  RG     Q  L+AAI  FT A+Q +P    ++  RG A    G   +AI D SKALE
Sbjct: 45  LYNRGVEELKQDRLDAAIDSFTRAVQLDPLDHLSYNNRGVAYKRKGLFDKAIADYSKALE 104

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
            +P+    L  RG   FK  D + A++DLS   K  K+  +  T LG+     G+  +A 
Sbjct: 105 VKPDYYFALANRGTARFKKGDLDGALKDLSDAAKQGKKESAIITTLGIVRKETGDLDQAL 164

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL-----------------QQVLYI 580
           +   +A+ L +    A+  L + Y+   +  KAL+                   +++  +
Sbjct: 165 KDLKQAVSLAKKNTRAYIALGELYELQKDYSKALDSYTKAVELGDLKEAGPQLKEKIGSL 224

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
            K ++   H  GL  +  G  K AI   S+ L I+P     L  R   YH IG+Y++AI 
Sbjct: 225 RKTYAMELHQEGLKNYREGNEKHAITIWSAALKIEPDFSPVLRDRGLTYHKIGKYKQAID 284

Query: 641 DYDAALDLELDSMEKFVLQCLAFYQ-----KEIALYT-ASKINS 678
           D+D A+  E  + E + ++  AFY+     + +A YT A ++NS
Sbjct: 285 DFDTAISKEPSNAELYRVRADAFYRLKQPDRALADYTQALQLNS 328



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 138/325 (42%), Gaps = 51/325 (15%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT------ 439
           +RG+A   +G +  AI+ + + L+  P Y  AL  RGTAR  + +L+ A+ D +      
Sbjct: 81  NRGVAYKRKGLFDKAIADYSKALEVKPDYYFALANRGTARFKKGDLDGALKDLSDAAKQG 140

Query: 440 ---------------------EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
                                +A++    A    K+  +A  ALGE  E  +D SKAL+ 
Sbjct: 141 KKESAIITTLGIVRKETGDLDQALKDLKQAVSLAKKNTRAYIALGELYELQKDYSKALDS 200

Query: 479 EPNSADI------------------------LHERGIVNFKFKDFNAAVEDLSACVKLDK 514
              + ++                        LH+ G+ N++  +   A+   SA +K++ 
Sbjct: 201 YTKAVELGDLKEAGPQLKEKIGSLRKTYAMELHQEGLKNYREGNEKHAITIWSAALKIEP 260

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +        GL    IG+YK+A +    AI  + +  E +      +  L   ++AL   
Sbjct: 261 DFSPVLRDRGLTYHKIGKYKQAIDDFDTAISKEPSNAELYRVRADAFYRLKQPDRALADY 320

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q L ++ R S AY+ RGL+ H      KA++D S  +  DP N      RA  Y    +
Sbjct: 321 TQALQLNSRDSIAYNNRGLVYHEQNDLNKALEDYSKAISTDPDNPVFFENRALVYLLKKQ 380

Query: 635 YREAIKDYDAALDLELDSMEKFVLQ 659
            ++A++DY  AL L  +   +  LQ
Sbjct: 381 NQKALEDYREALRLTNEESRRTALQ 405


>gi|428317844|ref|YP_007115726.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428241524|gb|AFZ07310.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 710

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 127/266 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RG A     +   AI+ FD  LK  P Y  A  GRG      +  E AI+ + +A+Q  
Sbjct: 419 GRGYALEKLQQSQEAIASFDNALKIQPDYAAAWEGRGDVLLDSQRYEEAIASYEKAVQFQ 478

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   AW  RGQA   L +   A++   KA+E + ++ +  +  G V  +      A E 
Sbjct: 479 PNLYGAWYNRGQAHQKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLELNKNQEAFEA 538

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               V+        +   G+AL  +  +++A EA+ KA++L  ++ +AW +L   Y +L 
Sbjct: 539 YEKAVRFQPNFYQGWYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELR 598

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+EC  + L ++ +  +A++ RG     L +++ A+   +  + + P   E  Y R
Sbjct: 599 KYEQAIECYNRALDLNPKEYQAWYNRGNAQSNLKRYEDALVSYNEAVYVKPDYSEAWYSR 658

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
            +   A+  Y +AI  YD A+  + D
Sbjct: 659 GNALVAVKRYEDAIASYDKAIRYKPD 684



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 125/263 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    N  ++  A++ +++ +   P Y E    +       ++ + + + +  AI+  
Sbjct: 351 NRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYQESQAAYDRAIELK 410

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   L +S EAI     AL+ +P+ A     RG V    + +  A+  
Sbjct: 411 PEYLEAWTGRGYALEKLQQSQEAIASFDNALKIQPDYAAAWEGRGDVLLDSQRYEEAIAS 470

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               V+       A+   G A   + +Y +A E++ KA+++  +  EAW +L   + +L 
Sbjct: 471 YEKAVQFQPNLYGAWYNRGQAHQKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLELN 530

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +++A E  ++ +     F + ++ +G+ L  + +H++A++     + + P   +  Y  
Sbjct: 531 KNQEAFEAYEKAVRFQPNFYQGWYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNL 590

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
              YH + +Y +AI+ Y+ ALDL
Sbjct: 591 GWSYHELRKYEQAIECYNRALDL 613



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 79/177 (44%)

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
           F   +A  L+ RG   +    F  A+      + L  +    +      L  + +Y++++
Sbjct: 341 FNSANATDLYNRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYQESQ 400

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
            A+ +AI+L   +LEAW       + L  S++A+      L I   ++ A+  RG +L  
Sbjct: 401 AAYDRAIELKPEYLEAWTGRGYALEKLQQSQEAIASFDNALKIQPDYAAAWEGRGDVLLD 460

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
             ++++AI      +   P+     Y R   +  + +Y  A++ Y  A++++ D+ E
Sbjct: 461 SQRYEEAIASYEKAVQFQPNLYGAWYNRGQAHQKLKQYDRAVESYQKAVEIKFDNYE 517



 Score = 47.8 bits (112), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 64/134 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+GIA +   ++  A+  +++ +K  P Y +A    G +    R+ E AI  +  A+  N
Sbjct: 555 SKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALDLN 614

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A++ L    +A+   ++A+  +P+ ++  + RG      K +  A+  
Sbjct: 615 PKEYQAWYNRGNAQSNLKRYEDALVSYNEAVYVKPDYSEAWYSRGNALVAVKRYEDAIAS 674

Query: 506 LSACVKLDKENKSA 519
               ++   +  +A
Sbjct: 675 YDKAIRYKPDYGAA 688


>gi|126347672|emb|CAJ89386.1| putative TPR repeat protein [Streptomyces ambofaciens ATCC 23877]
          Length = 1035

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 136/312 (43%), Gaps = 11/312 (3%)

Query: 380 SVDFRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           S D+ LS RG A    G+Y  A++ F   L  DP Y  AL  RG A       + A++D 
Sbjct: 589 SYDWALSQRGEAHRLAGRYDQAVTDFTAALAIDPAYGWALASRGQAHLQAGRYDQAVADL 648

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
           T A+  NP+      +RG A    G   +A+ DL+ AL+  P SA +L +RG  +     
Sbjct: 649 TAALDLNPTDDWVLGQRGAAHRLAGRYDDAVTDLTAALDLAPASAGLLGQRGEAHLMAGR 708

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  AV DL+A   L+  +       G A    G Y  A      A+ +D  +  A     
Sbjct: 709 YEQAVADLTAAHDLNPTDDWVLGQRGAAHRLAGRYDDAVTDFTAALAIDPAYDWALASRG 768

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
             ++     ++A+  L   L ID     A   RG      G++ +A+ DL++ L I P+ 
Sbjct: 769 AAHRQAERYDQAVTDLTAALAIDPANDWALAQRGAAHRLAGRYDQAVTDLTAALAITPAY 828

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL-------QCLAFYQKEIALY 671
              L  R   +   G Y +A+ D+ AALD  L+  + + L       Q    Y++ +  +
Sbjct: 829 PWALAQRGESHRLAGRYEQAVTDFTAALD--LNPTDDWALASRGQAHQLAGRYEQAVTDF 886

Query: 672 TAS-KINSEFCW 682
           TA+  I     W
Sbjct: 887 TAAVDIAPTLAW 898



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 121/263 (46%), Gaps = 4/263 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG A +  G+Y  A++     +  +P Y  AL  RG A       + A++DFT A+  +
Sbjct: 562 SRGQAHLQAGRYDQAVADLTAAIDSNPSYDWALSQRGEAHRLAGRYDQAVTDFTAALAID 621

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+ G A   RGQA    G   +A+ DL+ AL+  P    +L +RG  +     ++ AV D
Sbjct: 622 PAYGWALASRGQAHLQAGRYDQAVADLTAALDLNPTDDWVLGQRGAAHRLAGRYDDAVTD 681

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQD 563
           L+A + L   +       G A    G Y++A  A L A   D N  + W  G     ++ 
Sbjct: 682 LTAALDLAPASAGLLGQRGEAHLMAGRYEQA-VADLTAAH-DLNPTDDWVLGQRGAAHRL 739

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
               + A+      L ID  +  A   RG       ++ +A+ DL++ L IDP+N   L 
Sbjct: 740 AGRYDDAVTDFTAALAIDPAYDWALASRGAAHRQAERYDQAVTDLTAALAIDPANDWALA 799

Query: 624 LRASCYHAIGEYREAIKDYDAAL 646
            R + +   G Y +A+ D  AAL
Sbjct: 800 QRGAAHRLAGRYDQAVTDLTAAL 822



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 7/262 (2%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E A+++F  AI  +     AW  RG+    LG   +AI DL+ AL+  P     L  RG 
Sbjct: 506 EEALTEFDRAIGYDARNAHAWGSRGETHRWLGRYDQAITDLTTALDINPGDDWALASRGQ 565

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
            + +   ++ AV DL+A +  +     A +  G A    G Y +A      A+ +D  + 
Sbjct: 566 AHLQAGRYDQAVADLTAAIDSNPSYDWALSQRGEAHRLAGRYDQAVTDFTAALAIDPAYG 625

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A     Q +      ++A+  L   L ++         RG      G++  A+ DL++ 
Sbjct: 626 WALASRGQAHLQAGRYDQAVADLTAALDLNPTDDWVLGQRGAAHRLAGRYDDAVTDLTAA 685

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           L + P++   L  R   +   G Y +A+ D  AA D  L+  + +VL      Q+  A  
Sbjct: 686 LDLAPASAGLLGQRGEAHLMAGRYEQAVADLTAAHD--LNPTDDWVLG-----QRGAAHR 738

Query: 672 TASKINSEFCWFDIDGDIDPLF 693
            A + +     F     IDP +
Sbjct: 739 LAGRYDDAVTDFTAALAIDPAY 760



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 4/252 (1%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A++ FD+ +  D     A   RG    +    + AI+D T A+  NP    A   RGQA 
Sbjct: 508 ALTEFDRAIGYDARNAHAWGSRGETHRWLGRYDQAITDLTTALDINPGDDWALASRGQAH 567

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G   +A+ DL+ A++  P+    L +RG  +     ++ AV D +A + +D     A
Sbjct: 568 LQAGRYDQAVADLTAAIDSNPSYDWALSQRGEAHRLAGRYDQAVTDFTAALAIDPAYGWA 627

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQDLANSEKALECLQQV 577
               G A    G Y +A  A L A  LD N  + W  G     ++     + A+  L   
Sbjct: 628 LASRGQAHLQAGRYDQA-VADLTAA-LDLNPTDDWVLGQRGAAHRLAGRYDDAVTDLTAA 685

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
           L +    +     RG      G++++A+ DL++   ++P++   L  R + +   G Y +
Sbjct: 686 LDLAPASAGLLGQRGEAHLMAGRYEQAVADLTAAHDLNPTDDWVLGQRGAAHRLAGRYDD 745

Query: 638 AIKDYDAALDLE 649
           A+ D+ AAL ++
Sbjct: 746 AVTDFTAALAID 757



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 3/151 (1%)

Query: 369 CVTRISKSKSI--SVDFRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            VT ++ + +I  + D+ L+ RG A    G+Y  A++     L   P YP AL  RG + 
Sbjct: 780 AVTDLTAALAIDPANDWALAQRGAAHRLAGRYDQAVTDLTAALAITPAYPWALAQRGESH 839

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                 E A++DFT A+  NP+   A   RGQA    G   +A+ D + A++  P  A  
Sbjct: 840 RLAGRYEQAVTDFTAALDLNPTDDWALASRGQAHQLAGRYEQAVTDFTAAVDIAPTLAWP 899

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           L  RG  + +   +  A  DL   V  + E+
Sbjct: 900 LGMRGRAHRQAGHYARARADLERAVAWEPED 930



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 95/233 (40%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A +  G+Y  A++        +P     L  RG A       + A++DFT A+  +P
Sbjct: 699 RGEAHLMAGRYEQAVADLTAAHDLNPTDDWVLGQRGAAHRLAGRYDDAVTDFTAALAIDP 758

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   A   RG A        +A+ DL+ AL  +P +   L +RG  +     ++ AV DL
Sbjct: 759 AYDWALASRGAAHRQAERYDQAVTDLTAALAIDPANDWALAQRGAAHRLAGRYDQAVTDL 818

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +A + +      A    G +    G Y++A      A+ L+     A     Q +Q    
Sbjct: 819 TAALAITPAYPWALAQRGESHRLAGRYEQAVTDFTAALDLNPTDDWALASRGQAHQLAGR 878

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            E+A+      + I    +    +RG      G + +A  DL   +  +P ++
Sbjct: 879 YEQAVTDFTAAVDIAPTLAWPLGMRGRAHRQAGHYARARADLERAVAWEPEDV 931



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 61/151 (40%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG A     +Y  A++     L  DP    AL  RG A       + A++D T A+   
Sbjct: 766 SRGAAHRQAERYDQAVTDLTAALAIDPANDWALAQRGAAHRLAGRYDQAVTDLTAALAIT 825

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A  +RG++    G   +A+ D + AL+  P     L  RG  +     +  AV D
Sbjct: 826 PAYPWALAQRGESHRLAGRYEQAVTDFTAALDLNPTDDWALASRGQAHQLAGRYEQAVTD 885

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
            +A V +           G A    G Y +A
Sbjct: 886 FTAAVDIAPTLAWPLGMRGRAHRQAGHYARA 916


>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
 gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
          Length = 810

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 128/256 (50%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +GK   AI+ + + ++ +P + +A    G A + Q +LE AI+ + +AIQ NP+  +A+ 
Sbjct: 110 QGKLEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNFTQAYY 169

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
             G A +  G+  EAI    KA++  PN AD  +  G+  F     + A+      ++LD
Sbjct: 170 NLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGVALFDQGKLDEAIAAYQKAIQLD 229

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
             + +AY  LG AL   G+ ++A  A+ KAIQL+ N  EA+ +L     D    ++A+  
Sbjct: 230 PNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIAA 289

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
            Q+ + ++  F+ AY+  G  L   G+  +AI      + ++P+         +     G
Sbjct: 290 YQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQG 349

Query: 634 EYREAIKDYDAALDLE 649
           +  EAI  Y  A+ L+
Sbjct: 350 KRDEAIAAYQKAIQLD 365



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 141/306 (46%), Gaps = 7/306 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A  ++GK   AI+ + + ++ +P + +A    G A + Q +LE AI+ + +AIQ NP+
Sbjct: 138 GNALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPN 197

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +A+   G A    G+  EAI    KA++ +PN A+  +  G   +K      A+    
Sbjct: 198 YADAYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQ 257

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+     AY  LG+ALS  G+  +A  A+ KAIQL+ NF  A+  L     D    
Sbjct: 258 KAIQLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKR 317

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+   Q+ + ++  F+ AY+  G  L   G+  +AI      + +DP++         
Sbjct: 318 DEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPNDANAYNNLGL 377

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG 687
                G+  EAI  Y  A+ L  +         LA+     ALY+  K       +    
Sbjct: 378 ALRNQGKRDEAITAYQKAIQLNPNF-------ALAYNNLGNALYSQGKREEAIAAYQKAI 430

Query: 688 DIDPLF 693
            ++P F
Sbjct: 431 QLNPNF 436



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 151/328 (46%), Gaps = 5/328 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A  ++GK   AI+ + + ++ +P +  A  G G A + Q + + AI+ + +AIQ NP+
Sbjct: 274 GVALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPN 333

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+   G A +  G+  EAI    KA++ +PN A+  +  G+        + A+    
Sbjct: 334 FALAYNGLGNALSDQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQ 393

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+     AY  LG AL S G+ ++A  A+ KAIQL+ NF  A+ +L     D    
Sbjct: 394 KAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKR 453

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+   Q+ + ++  F+ AY+  G  L   G+  +AI      + ++P+         +
Sbjct: 454 DEAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNFALAYNNLGN 513

Query: 628 CYHAIGEYREAIKDYDAALDLELD-SMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
                G+  EAI  Y  AL L  D S+       LA     +      K+      ++  
Sbjct: 514 ALKDQGKLNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPEGKLEEALREYEAA 573

Query: 687 GDIDPLFKEYWCKRLHPKNVCEKVYRQP 714
             IDP F EY  K    ++    + +QP
Sbjct: 574 LKIDPKF-EYAIKN---RDAVLALLKQP 597



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 136/306 (44%), Gaps = 5/306 (1%)

Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAIS 402
           LS   D L +    A +  K+        + I +D  L+      G A   +GK   AI+
Sbjct: 25  LSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIA 84

Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
            + + ++ +P   +A    G A  +Q +LE AI+ + +AIQ NP+  +A+   G A +  
Sbjct: 85  AYQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQ 144

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G+  EAI    KA++  PN     +  GI          A+      ++L+     AY  
Sbjct: 145 GKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYN 204

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
           LG+AL   G+  +A  A+ KAIQLD N   A+ +L          E+A+   Q+ + ++ 
Sbjct: 205 LGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNP 264

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
             ++AY+  G+ L   G+  +AI      + ++P+         +     G+  EAI  Y
Sbjct: 265 NLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNGLGNALSDQGKRDEAIAAY 324

Query: 643 DAALDL 648
             A+ L
Sbjct: 325 QKAIQL 330



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 125/276 (45%), Gaps = 20/276 (7%)

Query: 415 PEALIGRGTARAFQRELEAA-ISDFTEA-------IQSNPSAGEAWKRRGQARAALGESV 466
           P  ++ +   + FQ+   A  +  +TEA       I+ +P+  +A+   G A    G+  
Sbjct: 21  PSVVLSQSIDQLFQQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLD 80

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           EAI    KA++  PN AD  +  G   +       A+      ++L+     AY  LG A
Sbjct: 81  EAIAAYQKAIQLNPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGNA 140

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
           LS  G+ ++A  A+ KAIQL+ NF +A+ +L     D    E+A+   Q+ + ++  ++ 
Sbjct: 141 LSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYAD 200

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+  G+ L   G+  +AI      + +DP++        +  +  G+  EAI  Y  A+
Sbjct: 201 AYYNLGVALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAI 260

Query: 647 DLELDSMEKF-----VL-------QCLAFYQKEIAL 670
            L  +  E +      L       + +A YQK I L
Sbjct: 261 QLNPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQL 296


>gi|440755624|ref|ZP_20934826.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
 gi|440175830|gb|ELP55199.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
          Length = 971

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 135/264 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG    N  KY  A+S +++ +K +P Y EA + RG   +  ++ + A+SD+++AI  
Sbjct: 681 FNRGNLYYNLQKYDLALSDWNKAIKINPNYAEAYVNRGNLYSDLQKYDLALSDYSKAIDI 740

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N +   A+  RG       +   A+ D SKA++  PN A+  + RGI+ +  + ++ A+ 
Sbjct: 741 NRNDAVAYYNRGLLYYNQQKYDLALSDYSKAIDINPNDAEAYYNRGILYYNQRKYDLALS 800

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D S  + ++     AY   GL   ++ +Y+ A   + +AI+++ NF  A+ +    Y DL
Sbjct: 801 DYSKAIDINPNYAEAYNNRGLLYYNLQKYELALADYNQAIRINPNFALAYNNRGNLYSDL 860

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              + AL    + + I++ ++ AY  RG+L +   ++  A+ D +  + I+P+       
Sbjct: 861 QKYDLALSDYSKAIDINRNYAYAYVNRGVLYYNQQKYDLALSDYNKAIEINPNYAYAYIN 920

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R   Y    E+ +A+ D + A +L
Sbjct: 921 RGVVYALTREFPKALADAEKASEL 944



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 154/325 (47%), Gaps = 11/325 (3%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK-RR 455
           Y  A+S+ +Q +   P  P     +    +  +  +  ++  T+AI   P A  AW   R
Sbjct: 626 YEQALSVINQAISLVPNNPNYYNEKYVVLSRLKRYDEGLAAITQAIDLAPRA--AWYFNR 683

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L +   A+ D +KA++  PN A+    RG +    + ++ A+ D S  + +++ 
Sbjct: 684 GNLYYNLQKYDLALSDWNKAIKINPNYAEAYVNRGNLYSDLQKYDLALSDYSKAIDINRN 743

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +  AY   GL   +  +Y  A   + KAI ++ N  EA+ +    Y +    + AL    
Sbjct: 744 DAVAYYNRGLLYYNQQKYDLALSDYSKAIDINPNDAEAYYNRGILYYNQRKYDLALSDYS 803

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + I+  +++AY+ RGLL + L +++ A+ D +  + I+P+       R + Y  + +Y
Sbjct: 804 KAIDINPNYAEAYNNRGLLYYNLQKYELALADYNQAIRINPNFALAYNNRGNLYSDLQKY 863

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKE---IALYTASK---INSEFCWFDID-GD 688
             A+ DY  A+D+  +    +V + + +Y ++   +AL   +K   IN  + +  I+ G 
Sbjct: 864 DLALSDYSKAIDINRNYAYAYVNRGVLYYNQQKYDLALSDYNKAIEINPNYAYAYINRGV 923

Query: 689 IDPLFKEYWCKRLHPKNVCEKVYRQ 713
           +  L +E+  K L       ++YRQ
Sbjct: 924 VYALTREF-PKALADAEKASELYRQ 947



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 83/163 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI   N+ KY  A+S + + +  +P Y EA   RG      ++ E A++D+ +AI+ N
Sbjct: 784 NRGILYYNQRKYDLALSDYSKAIDINPNYAEAYNNRGLLYYNLQKYELALADYNQAIRIN 843

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG   + L +   A+ D SKA++   N A     RG++ +  + ++ A+ D
Sbjct: 844 PNFALAYNNRGNLYSDLQKYDLALSDYSKAIDINRNYAYAYVNRGVLYYNQQKYDLALSD 903

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            +  ++++     AY   G+  +   E+ KA     KA +L R
Sbjct: 904 YNKAIEINPNYAYAYINRGVVYALTREFPKALADAEKASELYR 946



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   N  KY  A++ ++Q ++ +P +  A   RG   +  ++ + A+SD+++AI  N
Sbjct: 818 NRGLLYYNLQKYELALADYNQAIRINPNFALAYNNRGNLYSDLQKYDLALSDYSKAIDIN 877

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +   A+  RG       +   A+ D +KA+E  PN A     RG+V    ++F  A+ D
Sbjct: 878 RNYAYAYVNRGVLYYNQQKYDLALSDYNKAIEINPNYAYAYINRGVVYALTREFPKALAD 937

Query: 506 LSACVKLDKE--NKSAY 520
                +L ++  N++ Y
Sbjct: 938 AEKASELYRQQGNEAGY 954



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 12/153 (7%)

Query: 11  YRLNKTHKTICEIDELVRVDSVMASAITAR----IELAKL-CSLRNWSKAIRILDSLLAQ 65
           Y L K    + + ++ +R++   A A   R     +L K   +L ++SKAI I +   A 
Sbjct: 824 YNLQKYELALADYNQAIRINPNFALAYNNRGNLYSDLQKYDLALSDYSKAIDI-NRNYAY 882

Query: 66  SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
           +Y      NR   Y   + +   + D +KA++++P    AYI +G  ++      +AL+ 
Sbjct: 883 AY-----VNRGVLYYNQQKYDLALSDYNKAIEINPNYAYAYINRGVVYALTREFPKALAD 937

Query: 126 WEKGYEHALHQSADLKQFLELEELLTAAKQDRS 158
            EK  E    Q  +   + + ++L++  +Q+ S
Sbjct: 938 AEKASE-LYRQQGNEAGYQQAQKLISMIRQEMS 969


>gi|427716718|ref|YP_007064712.1| hypothetical protein Cal7507_1412 [Calothrix sp. PCC 7507]
 gi|427349154|gb|AFY31878.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 1313

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 124/271 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+ Q   G    AI+ +DQ ++  P   E    RG       +   AI+ + +A+   P
Sbjct: 414 QGLQQARSGDLLGAIAFYDQAIELKPHSDEYWFNRGLTLFHLEQFTEAIASYDQAVALKP 473

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG     LG+   AI    +A+  +P+S++    +G+   K      A+   
Sbjct: 474 DFYKAWYNRGGILGELGQFEAAIASFEQAIIIKPDSSESWASKGLALLKLGQLWEAIAAY 533

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + L  E++  + Y G+AL+   ++++A  ++ KA+++  ++ E W        +L  
Sbjct: 534 DQALVLQPEDQENWYYRGIALAVSEQHEEAIASYDKALEIQPDYHEVWIDRGVVLFNLKR 593

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+      L I   F  A++ RG+ L  LGQ ++AI      + I P      Y +A
Sbjct: 594 WSEAIASWDHALSIQADFYLAWYNRGIALDNLGQREEAIDSYRKAIAIKPDFHLAWYNQA 653

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                +G + EAI  YD AL ++LD  E ++
Sbjct: 654 VALFYLGRFAEAIASYDRALQIKLDYWEAWI 684



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 7/241 (2%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           EL    S  T  +Q      ++   +G  +A  G+ + AI    +A+E +P+S +    R
Sbjct: 389 ELAVHRSSPTVIVQHQTDRAQSLFYQGLQQARSGDLLGAIAFYDQAIELKPHSDEYWFNR 448

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+  F  + F  A+      V L  +   A+   G  L  +G+++ A  +  +AI +  +
Sbjct: 449 GLTLFHLEQFTEAIASYDQAVALKPDFYKAWYNRGGILGELGQFEAAIASFEQAIIIKPD 508

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             E+W         L    +A+    Q L +     + ++ RG+ L    QH++AI    
Sbjct: 509 SSESWASKGLALLKLGQLWEAIAAYDQALVLQPEDQENWYYRGIALAVSEQHEEAIASYD 568

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
             L I P   E    R      +  + EAI  +D AL ++ D         LA+Y + IA
Sbjct: 569 KALEIQPDYHEVWIDRGVVLFNLKRWSEAIASWDHALSIQADF-------YLAWYNRGIA 621

Query: 670 L 670
           L
Sbjct: 622 L 622



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 76/169 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+G+A +  G+   AI+ +DQ L   P   E    RG A A   + E AI+ + +A++  
Sbjct: 515 SKGLALLKLGQLWEAIAAYDQALVLQPEDQENWYYRGIALAVSEQHEEAIASYDKALEIQ 574

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E W  RG     L    EAI     AL  + +     + RGI          A++ 
Sbjct: 575 PDYHEVWIDRGVVLFNLKRWSEAIASWDHALSIQADFYLAWYNRGIALDNLGQREEAIDS 634

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               + +  +   A+    +AL  +G + +A  ++ +A+Q+  ++ EAW
Sbjct: 635 YRKAIAIKPDFHLAWYNQAVALFYLGRFAEAIASYDRALQIKLDYWEAW 683



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 11/196 (5%)

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDL 564
           +  V+   +   +  Y GL  +  G+   A   + +AI+L  +  E W +  LT F+  L
Sbjct: 398 TVIVQHQTDRAQSLFYQGLQQARSGDLLGAIAFYDQAIELKPHSDEYWFNRGLTLFH--L 455

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               +A+    Q + +   F KA++ RG +L  LGQ + AI      + I P + E    
Sbjct: 456 EQFTEAIASYDQAVALKPDFYKAWYNRGGILGELGQFEAAIASFEQAIIIKPDSSESWAS 515

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           +      +G+  EAI  YD AL L+ +  E +       Y + IAL  + +       +D
Sbjct: 516 KGLALLKLGQLWEAIAAYDQALVLQPEDQENW-------YYRGIALAVSEQHEEAIASYD 568

Query: 685 IDGDIDPLFKEYWCKR 700
              +I P + E W  R
Sbjct: 569 KALEIQPDYHEVWIDR 584


>gi|354604210|ref|ZP_09022201.1| hypothetical protein HMPREF9450_01116 [Alistipes indistinctus YIT
           12060]
 gi|353347977|gb|EHB92251.1| hypothetical protein HMPREF9450_01116 [Alistipes indistinctus YIT
           12060]
          Length = 673

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 130/298 (43%), Gaps = 34/298 (11%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G + + + K+  AI   + +LK D    E    RG A+    +L  A  DF+ AI++NP 
Sbjct: 44  GRSYIIDNKFRDAIETLNVLLKVDEKAYEGYFLRGIAKYNLDDLLGAEQDFSYAIENNPV 103

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A++ R   R+ LG   +A++D   A++  P+  D    RG+     + F  AVED +
Sbjct: 104 FTAAYQYRAITRSRLGNYDDALKDFQVAIDLRPDRPDPYFSRGVTFLLSQQFEKAVEDFT 163

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY------ 561
             ++ D +   AY   G +   + +  +A E +  AI+ +R    A+      Y      
Sbjct: 164 TFIRFDNKVVDAYVNRGTSYLMMKDTTRAYEDYNTAIRTNRESPLAYSRRGMLYMAQKKY 223

Query: 562 -QDLANSEKALEC---------------------------LQQVLYIDKRFSKAYHLRGL 593
            + LA+ +K++EC                             +VL +D   S  Y  R +
Sbjct: 224 DEALADFDKSIECDSTYIPSYFNRALVYSTINRPVQAIEDFSRVLALDSTSSLTYFNRAI 283

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           L + +G +  A+ D        P+N+   Y RA+ Y  +G+Y  AI DY  A++L  D
Sbjct: 284 LRNQIGDYNNALADYDKVAFYSPNNVLLYYNRAALYRQLGDYYAAINDYTRAIELYPD 341



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 7/240 (2%)

Query: 375 KSKSISVDFR-------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           K   +++D R        SRG+  +   ++  A+  F   ++ D    +A + RGT+   
Sbjct: 126 KDFQVAIDLRPDRPDPYFSRGVTFLLSQQFEKAVEDFTTFIRFDNKVVDAYVNRGTSYLM 185

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
            ++   A  D+  AI++N  +  A+ RRG    A  +  EA+ D  K++E +        
Sbjct: 186 MKDTTRAYEDYNTAIRTNRESPLAYSRRGMLYMAQKKYDEALADFDKSIECDSTYIPSYF 245

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            R +V         A+ED S  + LD  +   Y    +  + IG+Y  A   + K     
Sbjct: 246 NRALVYSTINRPVQAIEDFSRVLALDSTSSLTYFNRAILRNQIGDYNNALADYDKVAFYS 305

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            N +  + +    Y+ L +   A+    + + +   F+ AY  R  L + L   + +  D
Sbjct: 306 PNNVLLYYNRAALYRQLGDYYAAINDYTRAIELYPDFANAYLGRSALRYMLNDMQGSRSD 365



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%)

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A+E L  +L +D++  + Y LRG+  + L     A +D S  +  +P        RA   
Sbjct: 56  AIETLNVLLKVDEKAYEGYFLRGIAKYNLDDLLGAEQDFSYAIENNPVFTAAYQYRAITR 115

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
             +G Y +A+KD+  A+DL  D  + +  + + F
Sbjct: 116 SRLGNYDDALKDFQVAIDLRPDRPDPYFSRGVTF 149



 Score = 44.7 bits (104), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 7/141 (4%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           + L  RG  ++  R+   +IS++T AI  +PS    +  R   ++ + + + +I +  + 
Sbjct: 493 QLLFKRGITQSLIRQYTGSISNYTAAIDLDPSNPFLYINRSTTQSEMVDFISSIDNGYQR 552

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA--LSSIGEY 533
           +  + + A  L      ++ + D   A+ DL+   +L  E   AY Y   A  L   G  
Sbjct: 553 ITVDNDPASQLKSNSSRSYNYDD---AIADLNKAARLFPE--FAYIYYNRANLLCRSGRI 607

Query: 534 KKAEEAHLKAIQLDRNFLEAW 554
            +A E + KAI+L+ +F EA+
Sbjct: 608 PEALEDYTKAIELNPSFAEAY 628



 Score = 44.3 bits (103), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 14/204 (6%)

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           +AI+ L+  L+ +  + +    RGI  +   D   A +D S  ++ +    +AY Y  + 
Sbjct: 55  DAIETLNVLLKVDEKAYEGYFLRGIAKYNLDDLLGAEQDFSYAIENNPVFTAAYQYRAIT 114

Query: 527 LSSIGEYKKAEEAHLKAIQL-----DRNFLEAWGHLT--QFYQDLANSEKALECLQQVLY 579
            S +G Y  A +    AI L     D  F      L   QF       EKA+E     + 
Sbjct: 115 RSRLGNYDDALKDFQVAIDLRPDRPDPYFSRGVTFLLSQQF-------EKAVEDFTTFIR 167

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
            D +   AY  RG     +    +A +D ++ +  +  +      R   Y A  +Y EA+
Sbjct: 168 FDNKVVDAYVNRGTSYLMMKDTTRAYEDYNTAIRTNRESPLAYSRRGMLYMAQKKYDEAL 227

Query: 640 KDYDAALDLELDSMEKFVLQCLAF 663
            D+D +++ +   +  +  + L +
Sbjct: 228 ADFDKSIECDSTYIPSYFNRALVY 251



 Score = 43.9 bits (102), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 31/159 (19%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA------------FQR--- 429
             RGI Q    +Y  +IS +   +  DP  P   I R T ++            +QR   
Sbjct: 496 FKRGITQSLIRQYTGSISNYTAAIDLDPSNPFLYINRSTTQSEMVDFISSIDNGYQRITV 555

Query: 430 ----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
                             + AI+D  +A +  P     +  R       G   EA++D +
Sbjct: 556 DNDPASQLKSNSSRSYNYDDAIADLNKAARLFPEFAYIYYNRANLLCRSGRIPEALEDYT 615

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
           KA+E  P+ A+  + RG+V    KD      D+S   +L
Sbjct: 616 KAIELNPSFAEAYYNRGLVQIFLKDTRKGCLDMSKAGEL 654


>gi|254412945|ref|ZP_05026717.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196180109|gb|EDX75101.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 863

 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 125/263 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA +N      AI  FD+ ++  P + EA   RG      R LE AI  F +AIQ  
Sbjct: 568 NRGIALLNLRLLEEAIVSFDKAIQIKPDFHEAWNNRGVVLLNLRLLEEAIVSFDKAIQIK 627

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   L    E++    KALE +P+S + L+ RG V  K K+ + A+  
Sbjct: 628 PDFHEAWNNRGDALLNLRRLDESLACFDKALELKPDSWEALNNRGTVLLKLKNLDKALTC 687

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +++      A+    + L  +G++K+A  +  KA+++   + EA  +         
Sbjct: 688 FNKAIQIQPNLHQAWNNRSIVLRKLGQFKEAITSCNKALEIQPTYYEASYNKGIALAMSG 747

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    +   I + F   +++RGL  + LG+ ++AI        I P+N +  Y +
Sbjct: 748 YLKQAIISFDKATQIKQDFHDNWYIRGLAFYDLGRLEEAITSFEEATKIKPNNADNFYSK 807

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
           A CY    +   A++    A+ L
Sbjct: 808 ACCYALQNKIDLAVESLKQAIKL 830



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 2/281 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQ 443
           L +G A    G    AI+ +D+ L+  P   EA   RG+A R      EA IS   +AIQ
Sbjct: 499 LGKGYALHKLGNLKEAITNYDKGLELKPNNYEAWSNRGSALRDLGHNKEAIISH-DKAIQ 557

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
              +  +AW  RG A   L    EAI    KA++ +P+  +  + RG+V    +    A+
Sbjct: 558 IKSNYYQAWHNRGIALLNLRLLEEAIVSFDKAIQIKPDFHEAWNNRGVVLLNLRLLEEAI 617

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                 +++  +   A+   G AL ++    ++     KA++L  +  EA  +       
Sbjct: 618 VSFDKAIQIKPDFHEAWNNRGDALLNLRRLDESLACFDKALELKPDSWEALNNRGTVLLK 677

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L N +KAL C  + + I     +A++ R ++L  LGQ K+AI   +  L I P+  E  Y
Sbjct: 678 LKNLDKALTCFNKAIQIQPNLHQAWNNRSIVLRKLGQFKEAITSCNKALEIQPTYYEASY 737

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            +       G  ++AI  +D A  ++ D  + + ++ LAFY
Sbjct: 738 NKGIALAMSGYLKQAIISFDKATQIKQDFHDNWYIRGLAFY 778



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 164/393 (41%), Gaps = 21/393 (5%)

Query: 308 HDKLSSDSASLNDSNTNSESYSKSSI-SDNKSSDSTESRSKLSF-KWDMLKETSNEAKRN 365
           H K    S+ +   N     YSK  I S NK+ ++T+   K +F K  +L+     A   
Sbjct: 441 HSKKMLVSSLIFGFNAIKLGYSKEGIISINKTLETTQKLCKSNFGKEYVLENLEGYAYLG 500

Query: 366 KKFCVTRISKSKSISVDFRL-------------SRGIAQVNEGKYASAISIFDQILKEDP 412
           K + + ++   K    ++               +RG A  + G    AI   D+ ++   
Sbjct: 501 KGYALHKLGNLKEAITNYDKGLELKPNNYEAWSNRGSALRDLGHNKEAIISHDKAIQIKS 560

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
            Y +A   RG A    R LE AI  F +AIQ  P   EAW  RG     L    EAI   
Sbjct: 561 NYYQAWHNRGIALLNLRLLEEAIVSFDKAIQIKPDFHEAWNNRGVVLLNLRLLEEAIVSF 620

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            KA++ +P+  +  + RG      +  + ++      ++L  ++  A    G  L  +  
Sbjct: 621 DKAIQIKPDFHEAWNNRGDALLNLRRLDESLACFDKALELKPDSWEALNNRGTVLLKLKN 680

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
             KA     KAIQ+  N  +AW + +   + L   ++A+    + L I   + +A + +G
Sbjct: 681 LDKALTCFNKAIQIQPNLHQAWNNRSIVLRKLGQFKEAITSCNKALEIQPTYYEASYNKG 740

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           + L   G  K+AI        I     +  Y+R   ++ +G   EAI  ++ A  ++ ++
Sbjct: 741 IALAMSGYLKQAIISFDKATQIKQDFHDNWYIRGLAFYDLGRLEEAITSFEEATKIKPNN 800

Query: 653 MEKFVLQ-CLAFYQKEI-----ALYTASKINSE 679
            + F  + C    Q +I     +L  A K+N E
Sbjct: 801 ADNFYSKACCYALQNKIDLAVESLKQAIKLNPE 833



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY  +G  LH LG  K+AI +   GL + P+N E    R S    +G  +EAI  +D A+
Sbjct: 497 AYLGKGYALHKLGNLKEAITNYDKGLELKPNNYEAWSNRGSALRDLGHNKEAIISHDKAI 556

Query: 647 DLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            ++ +  +       A++ + IAL     +      FD    I P F E W  R
Sbjct: 557 QIKSNYYQ-------AWHNRGIALLNLRLLEEAIVSFDKAIQIKPDFHEAWNNR 603


>gi|397690319|ref|YP_006527573.1| TPR repeat-containing protein [Melioribacter roseus P3M]
 gi|395811811|gb|AFN74560.1| TPR repeat-containing protein [Melioribacter roseus P3M]
          Length = 470

 Score =  105 bits (262), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 140/285 (49%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD  ++  IA+ N G +  A+   ++ L  +P   E L   G     + +   A+  F  
Sbjct: 106 VDTHINIAIAEDNLGMFEEAVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRM 165

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A++  P   EAW   G    ++GE  +A+      L  +P +    + +GIV+ + ++F 
Sbjct: 166 AVEKAPDYLEAWYELGYCYESMGELKDALAAYEMYLNGDPENYAGWYNKGIVHLRLEEFE 225

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+      + L  +  S++   G A    G+YK+A  A+ KA+++D +    + +L Q 
Sbjct: 226 KAINAFELSIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKKALKIDPDDETIYYNLGQT 285

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y+++ +   A++C  + + +D  + +AY  RG      G+ + A++D +  + I    ++
Sbjct: 286 YEEMGSIANAIKCYTEAINLDPDYYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVD 345

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
             Y +A   +++G+  E+I+ Y  A++++ D+   ++    AF++
Sbjct: 346 AWYAKADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKLAEAFFE 390



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 99/220 (45%)

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           F +A+  NP+  +       A   LG   EA++ L KAL  EP++ +IL+  G +  K +
Sbjct: 95  FRKALSLNPNDVDTHINIAIAEDNLGMFEEAVESLEKALAIEPHNEEILYNLGALYEKKE 154

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
            +N AVE     V+   +   A+  LG    S+GE K A  A+   +  D      W + 
Sbjct: 155 KYNEAVEYFRMAVEKAPDYLEAWYELGYCYESMGELKDALAAYEMYLNGDPENYAGWYNK 214

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              +  L   EKA+   +  + +   FS ++   G   +  G++K+A+      L IDP 
Sbjct: 215 GIVHLRLEEFEKAINAFELSIALKDDFSSSWFNCGYAYYKTGKYKQAMTAYKKALKIDPD 274

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           +    Y     Y  +G    AIK Y  A++L+ D  E ++
Sbjct: 275 DETIYYNLGQTYEEMGSIANAIKCYTEAINLDPDYYEAYL 314



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 93/194 (47%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A    GKY  A++ + + LK DP         G        +  AI  +TEAI  +P 
Sbjct: 249 GYAYYKTGKYKQAMTAYKKALKIDPDDETIYYNLGQTYEEMGSIANAIKCYTEAINLDPD 308

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA+  RG    A G+   A++D +KA+       D  + +  + +     N ++E   
Sbjct: 309 YYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVDAWYAKADLEYSLGKLNESIESYK 368

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             V++D +N + +  L  A   +G + ++ +A+ + I++D+N+  A+  + +    L+++
Sbjct: 369 NAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIRIDKNYARAYYSIAKINFLLSHT 428

Query: 568 EKALECLQQVLYID 581
           ++ +E L++   +D
Sbjct: 429 QEGIEYLKKAFELD 442



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 8/214 (3%)

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +Q  P   E W  +G     +    EA     KAL   PN  D      I       F  
Sbjct: 65  LQITPYNYEIWHFKGIFLNNMFRFAEAYNCFRKALSLNPNDVDTHINIAIAEDNLGMFEE 124

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           AVE L   + ++  N+     LG       +Y +A E    A++   ++LEAW  L   Y
Sbjct: 125 AVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRMAVEKAPDYLEAWYELGYCY 184

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGLGIDPSN- 618
           + +   + AL   +  L  D      ++ +G++   L + +KAI   +LS  L  D S+ 
Sbjct: 185 ESMGELKDALAAYEMYLNGDPENYAGWYNKGIVHLRLEEFEKAINAFELSIALKDDFSSS 244

Query: 619 -IECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
              C Y     Y+  G+Y++A+  Y  AL ++ D
Sbjct: 245 WFNCGY----AYYKTGKYKQAMTAYKKALKIDPD 274



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 34/161 (21%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G  A+AI  + + +  DP Y EA + RG       + + A+ DF +AI       +AW  
Sbjct: 290 GSIANAIKCYTEAINLDPDYYEAYLARGNCYDASGKFQLALRDFNKAITIASEPVDAWYA 349

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNS-------ADILHERG----------------- 490
           +     +LG+  E+I+    A+E +P++       A+   E G                 
Sbjct: 350 KADLEYSLGKLNESIESYKNAVEIDPDNFNGWLKLAEAFFEVGNWLESLKAYKECIRIDK 409

Query: 491 ----------IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
                      +NF        +E L    +LD   K+ +T
Sbjct: 410 NYARAYYSIAKINFLLSHTQEGIEYLKKAFELDPNIKTEFT 450



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/141 (20%), Positives = 69/141 (48%)

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +A +++   N   + + G+ L+++  + +A     KA+ L+ N ++   ++     +L  
Sbjct: 62  NALLQITPYNYEIWHFKGIFLNNMFRFAEAYNCFRKALSLNPNDVDTHINIAIAEDNLGM 121

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+E L++ L I+    +  +  G L     ++ +A++     +   P  +E  Y   
Sbjct: 122 FEEAVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRMAVEKAPDYLEAWYELG 181

Query: 627 SCYHAIGEYREAIKDYDAALD 647
            CY ++GE ++A+  Y+  L+
Sbjct: 182 YCYESMGELKDALAAYEMYLN 202


>gi|145545470|ref|XP_001458419.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426239|emb|CAK91022.1| unnamed protein product [Paramecium tetraurelia]
          Length = 551

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 140/285 (49%), Gaps = 4/285 (1%)

Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
           N  + VT  +K   +     +   ++++N  KY  AI  +D+ +  +P Y      +G A
Sbjct: 121 NPNYDVTWFNKGNQLLEQHYIGISLSKIN--KYYEAIECYDKAIFINPNYDLTWYLKGHA 178

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
                  + AI    +AI  NP+  +AW  +G A  +L +  EAI+   KA++  PN+  
Sbjct: 179 LNKLNRYQEAIECSDKAISINPNYDDAWNNKGNALKSLNKYQEAIECYDKAIKINPNNFG 238

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
           + + +GI          A+E  +  + ++     A+   G AL+ + +Y++A E + KAI
Sbjct: 239 VWNNKGIALDNLNQHQEAMECYNKAISINPNYDVAWNNKGNALNHLHKYQEAVECYYKAI 298

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
            ++ N+  AW ++      L   + A+EC ++ + I+  +   +   GL L  L ++++A
Sbjct: 299 FINPNYDVAWNNIGDGLSKLNKYKDAIECYKKAISINPNYDVTWFHNGLALSNLNKYQEA 358

Query: 605 IKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDYDAALDL 648
           I+     + I+P N E  ++ +    + + +Y+EAI+ YD A+ +
Sbjct: 359 IECYDKAISINP-NYEAAWINKGHALNKLNQYQEAIECYDKAISI 402



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 127/265 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GIA  N  ++  A+  +++ +  +P Y  A   +G A     + + A+  + +AI  N
Sbjct: 242 NKGIALDNLNQHQEAMECYNKAISINPNYDVAWNNKGNALNHLHKYQEAVECYYKAIFIN 301

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   AW   G   + L +  +AI+   KA+   PN        G+       +  A+E 
Sbjct: 302 PNYDVAWNNIGDGLSKLNKYKDAIECYKKAISINPNYDVTWFHNGLALSNLNKYQEAIEC 361

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + ++   ++A+   G AL+ + +Y++A E + KAI ++ N+  AW +       L 
Sbjct: 362 YDKAISINPNYEAAWINKGHALNKLNQYQEAIECYDKAISINSNYEAAWNNKGLALTKLN 421

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+EC  +V+ I++    A++ +G  L  L Q++ AI+     + I+  +      +
Sbjct: 422 KYQEAIECYDKVISINQNSDAAWNNKGFALSNLYQYQDAIECYDKAISINSKHDTAWQNK 481

Query: 626 ASCYHAIGEYREAIKDYDAALDLEL 650
               H + +Y++AI  YD AL + +
Sbjct: 482 GLILHNLNKYKDAIICYDQALSISI 506



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 124/263 (47%), Gaps = 12/263 (4%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
            KY  AI  +D+ +  +P Y  A I +G A     + + AI  + +AI  NP+    W  
Sbjct: 37  NKYQEAIECYDKAISINPNYEAAWINKGLALNKLNQYQEAIECYNKAISINPNYDVTWYL 96

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADIL-----------HERGIVNFKFKDFNAAV 503
           +G A + L +  +AI+   K++   PN  D+            H  GI   K   +  A+
Sbjct: 97  KGHALSKLNQYQKAIECYDKSISINPNY-DVTWFNKGNQLLEQHYIGISLSKINKYYEAI 155

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           E     + ++      +   G AL+ +  Y++A E   KAI ++ N+ +AW +     + 
Sbjct: 156 ECYDKAIFINPNYDLTWYLKGHALNKLNRYQEAIECSDKAISINPNYDDAWNNKGNALKS 215

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   ++A+EC  + + I+      ++ +G+ L  L QH++A++  +  + I+P+      
Sbjct: 216 LNKYQEAIECYDKAIKINPNNFGVWNNKGIALDNLNQHQEAMECYNKAISINPNYDVAWN 275

Query: 624 LRASCYHAIGEYREAIKDYDAAL 646
            + +  + + +Y+EA++ Y  A+
Sbjct: 276 NKGNALNHLHKYQEAVECYYKAI 298



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 12/138 (8%)

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y Y+G AL S+ +Y++A E + KAI ++ N+  AW +       L   ++A+EC  + + 
Sbjct: 26  YYYIGNALKSLNKYQEAIECYDKAISINPNYEAAWINKGLALNKLNQYQEAIECYNKAIS 85

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN-----------IECLYLRASC 628
           I+  +   ++L+G  L  L Q++KAI+     + I+P+            +E  Y+  S 
Sbjct: 86  INPNYDVTWYLKGHALSKLNQYQKAIECYDKSISINPNYDVTWFNKGNQLLEQHYIGISL 145

Query: 629 YHAIGEYREAIKDYDAAL 646
              I +Y EAI+ YD A+
Sbjct: 146 -SKINKYYEAIECYDKAI 162



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 93/488 (19%), Positives = 201/488 (41%), Gaps = 55/488 (11%)

Query: 46  LCSLRNWSKAIRILDSLLA--QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLL 103
           L SL  + +AI   D  ++   +YE   I N+    ++L  ++  I   +KA+ ++P   
Sbjct: 33  LKSLNKYQEAIECYDKAISINPNYEAAWI-NKGLALNKLNQYQEAIECYNKAISINPNYD 91

Query: 104 QAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEY 163
             + LKG A S L + ++A+  ++K    +++ + D+  F +  +LL           ++
Sbjct: 92  VTWYLKGHALSKLNQYQKAIECYDKSI--SINPNYDVTWFNKGNQLLE----------QH 139

Query: 164 DVSNSMSSLTVSESGLNANDKMSETSENHN-----KSDICDSSSQSRDVSETCSKS-SHD 217
            +  S+S +      +   DK    + N++     K    +  ++ ++  E   K+ S +
Sbjct: 140 YIGISLSKINKYYEAIECYDKAIFINPNYDLTWYLKGHALNKLNRYQEAIECSDKAISIN 199

Query: 218 PDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGS----KSTHASRDASEI 273
           P+  +  +++     S+   +  +    K  +++ N+ G  +       + +  ++A E 
Sbjct: 200 PNYDDAWNNKGNALKSLNKYQEAIECYDKAIKINPNNFGVWNNKGIALDNLNQHQEAMEC 259

Query: 274 NRQS---SDDFDICNGPIDKASVNERHGRQ-----------TNGTHDVH-DKLSSDSASL 318
             ++   + ++D+       A +N  H  Q            N  +DV  + +    + L
Sbjct: 260 YNKAISINPNYDVAWNNKGNA-LNHLHKYQEAVECYYKAIFINPNYDVAWNNIGDGLSKL 318

Query: 319 NDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKS 378
           N      E Y K+ IS N + D T   + L+         SN  K  +   +    K+ S
Sbjct: 319 NKYKDAIECYKKA-ISINPNYDVTWFHNGLAL--------SNLNKYQE--AIECYDKAIS 367

Query: 379 ISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           I+ ++    +++G A     +Y  AI  +D+ +  +  Y  A   +G A     + + AI
Sbjct: 368 INPNYEAAWINKGHALNKLNQYQEAIECYDKAISINSNYEAAWNNKGLALTKLNKYQEAI 427

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
             + + I  N ++  AW  +G A + L +  +AI+   KA+            +G++   
Sbjct: 428 ECYDKVISINQNSDAAWNNKGFALSNLYQYQDAIECYDKAISINSKHDTAWQNKGLILHN 487

Query: 496 FKDFNAAV 503
              +  A+
Sbjct: 488 LNKYKDAI 495


>gi|159903795|ref|YP_001551139.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
           9211]
 gi|159888971|gb|ABX09185.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
           9211]
          Length = 442

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 126/270 (46%), Gaps = 3/270 (1%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D    RG ++        AI  F +I+  D  + +A + RG         + AI DF +
Sbjct: 124 IDAYFQRGQSKAELNDNQGAIEDFTKIIDIDNNFVDAYLYRGYFLMLLENNKEAIDDFNQ 183

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            I+ +P    A+  R  A+  LG+   A+ D +KA+E  P  A   ++RG + F   D  
Sbjct: 184 VIRIDPKNEVAYNHRACAKENLGDRKGALDDFNKAIELNPEFAMAYNDRGQMIFSSGDHK 243

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           +A  D    + LD+E+  AY   GL  +   +Y+ A     KA+ +D  F E +G     
Sbjct: 244 SAFNDFDKAISLDQESGPAYLNRGLCKNIDEDYQGAISDFTKAVTIDPFFTEGYGSRAIS 303

Query: 561 YQDLANSEKALECLQQVLYIDKRFSK---AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             ++ + E AL  L +V+ ID   S+   A + RG+  H LG ++ AI D +  +  D S
Sbjct: 304 KININDYESALYDLNKVMEIDPEESQRGEALYYRGIAKHELGDYQGAILDFNKLIEFDQS 363

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALD 647
           N +    R      +  YR AI D++ A++
Sbjct: 364 NSDIYNRRGCAKMCLENYRGAILDFNKAIE 393



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 107/215 (49%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I  +++ + + P+  +A+ +RGQ++A L ++  AI+D +K ++ + N  D    RG    
Sbjct: 110 IKYYSKVLNNTPNDIDAYFQRGQSKAELNDNQGAIEDFTKIIDIDNNFVDAYLYRGYFLM 169

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             ++   A++D +  +++D +N+ AY +   A  ++G+ K A +   KAI+L+  F  A+
Sbjct: 170 LLENNKEAIDDFNQVIRIDPKNEVAYNHRACAKENLGDRKGALDDFNKAIELNPEFAMAY 229

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
               Q      + + A     + + +D+    AY  RGL  +    ++ AI D +  + I
Sbjct: 230 NDRGQMIFSSGDHKSAFNDFDKAISLDQESGPAYLNRGLCKNIDEDYQGAISDFTKAVTI 289

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           DP   E    RA     I +Y  A+ D +  ++++
Sbjct: 290 DPFFTEGYGSRAISKININDYESALYDLNKVMEID 324



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 15/177 (8%)

Query: 377 KSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K+IS+D       L+RG+ +  +  Y  AIS F + +  DP + E    R  ++    + 
Sbjct: 251 KAISLDQESGPAYLNRGLCKNIDEDYQGAISDFTKAVTIDPFFTEGYGSRAISKININDY 310

Query: 432 EAAISDFTEAIQSNPSA---GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           E+A+ D  + ++ +P     GEA   RG A+  LG+   AI D +K +EF+ +++DI + 
Sbjct: 311 ESALYDLNKVMEIDPEESQRGEALYYRGIAKHELGDYQGAILDFNKLIEFDQSNSDIYNR 370

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-------LSSIGEYKKAEE 538
           RG      +++  A+ D +  ++ +      Y   GLA        S+  ++KKA E
Sbjct: 371 RGCAKMCLENYRGAILDFNKAIENNSTFSLPYLNRGLAKANLNNLTSACSDWKKASE 427



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA+   G Y  AI  F+++++ D    +    RG A+        AI DF +AI++N 
Sbjct: 337 RGIAKHELGDYQGAILDFNKLIEFDQSNSDIYNRRGCAKMCLENYRGAILDFNKAIENNS 396

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF-EPNSADILHERG 490
           +    +  RG A+A L     A  D  KA E  E ++ ++L E G
Sbjct: 397 TFSLPYLNRGLAKANLNNLTSACSDWKKASELGEESAVELLKEHG 441


>gi|91774230|ref|YP_566922.1| tetratricopeptide protein [Methanococcoides burtonii DSM 6242]
 gi|91713245|gb|ABE53172.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM
           6242]
          Length = 573

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 145/307 (47%), Gaps = 6/307 (1%)

Query: 375 KSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K+  IS DF +   ++G A  N  +Y  AI  +D+ ++ DP +      +G A     + 
Sbjct: 235 KAIEISTDFDMYWNNKGNALCNLERYDEAIECYDKAIEIDPDFSSYCNNKGDALCNLEKY 294

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AI  + +AI+ +P        +G A   L    EAI+   KA+E   +     + +G 
Sbjct: 295 DEAIECYDKAIEIDPDFSSYCNNKGDALCNLERYNEAIECYDKAIEMSTDFDMYWNNKGN 354

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
            +F  + +N A+E     +++D +  S     G AL ++ +Y +A E + KAI++D +F 
Sbjct: 355 AHFNLEKYNKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIECYDKAIEIDPDFS 414

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
             WG+      +L   ++A+EC  + L I   F    + +G  L  L ++ +AI+     
Sbjct: 415 SYWGNKGDALCNLERHDEAIECYDKALEISTDFGMYCNNKGNALCNLERYNEAIECYDKT 474

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ---KEI 668
           L I P    C   + +  + +  Y EAI+ YD AL+++ +  + +      F +   KE 
Sbjct: 475 LEIYPDFSSCWNNKGNALYYLERYNEAIECYDKALEMDPNDDDAWYASASIFSKNGNKEE 534

Query: 669 ALYTASK 675
           ALY  +K
Sbjct: 535 ALYRLAK 541



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/329 (22%), Positives = 142/329 (43%), Gaps = 8/329 (2%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYAS-AISIFDQILKEDPMYPEALIGRGTARAFQ 428
           +  + + K+ +++F        +N  K  +  +  + + L+ +P        +G A    
Sbjct: 164 INSLERRKNTNLEFDSDAATIFLNIEKIVNLELDYYTKALEHNPDNDSYWSNKGDALCNL 223

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + AI  + +AI+ +      W  +G A   L    EAI+   KA+E +P+ +   + 
Sbjct: 224 EKYDEAIGCYDKAIEISTDFDMYWNNKGNALCNLERYDEAIECYDKAIEIDPDFSSYCNN 283

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G      + ++ A+E     +++D +  S     G AL ++  Y +A E + KAI++  
Sbjct: 284 KGDALCNLEKYDEAIECYDKAIEIDPDFSSYCNNKGDALCNLERYNEAIECYDKAIEMST 343

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           +F   W +    + +L    KA+EC  + + ID  FS   + +G  L  L ++ +AI+  
Sbjct: 344 DFDMYWNNKGNAHFNLEKYNKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIECY 403

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
              + IDP        +      +  + EAI+ YD AL++  D    F + C     K  
Sbjct: 404 DKAIEIDPDFSSYWGNKGDALCNLERHDEAIECYDKALEISTD----FGMYC---NNKGN 456

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYW 697
           AL    + N     +D   +I P F   W
Sbjct: 457 ALCNLERYNEAIECYDKTLEIYPDFSSCW 485



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 3/210 (1%)

Query: 375 KSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K+  +S DF +   ++G A  N  KY  AI  +D+ ++ DP +      +G A     + 
Sbjct: 337 KAIEMSTDFDMYWNNKGNAHFNLEKYNKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKY 396

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AI  + +AI+ +P     W  +G A   L    EAI+   KALE   +     + +G 
Sbjct: 397 DEAIECYDKAIEIDPDFSSYWGNKGDALCNLERHDEAIECYDKALEISTDFGMYCNNKGN 456

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                + +N A+E     +++  +  S +   G AL  +  Y +A E + KA+++D N  
Sbjct: 457 ALCNLERYNEAIECYDKTLEIYPDFSSCWNNKGNALYYLERYNEAIECYDKALEMDPNDD 516

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYID 581
           +AW      +    N E+AL  L + + +D
Sbjct: 517 DAWYASASIFSKNGNKEEALYRLAKSIELD 546



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 41/284 (14%)

Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K+I +D   S     +G A  N  +Y  AI  +D+ ++    +      +G A     + 
Sbjct: 303 KAIEIDPDFSSYCNNKGDALCNLERYNEAIECYDKAIEMSTDFDMYWNNKGNAHFNLEKY 362

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             AI  + +AI+ +P        +G A   L +  EAI+   KA+E +P           
Sbjct: 363 NKAIECYDKAIEIDPDFSSYCNNKGDALCNLEKYDEAIECYDKAIEIDP----------- 411

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                 DF+                 S +   G AL ++  + +A E + KA+++  +F 
Sbjct: 412 ------DFS-----------------SYWGNKGDALCNLERHDEAIECYDKALEISTDFG 448

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
               +      +L    +A+EC  + L I   FS  ++ +G  L+ L ++ +AI+     
Sbjct: 449 MYCNNKGNALCNLERYNEAIECYDKTLEIYPDFSSCWNNKGNALYYLERYNEAIECYDKA 508

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
           L +DP++ +  Y  AS +   G   EA+  Y  A  +ELD  +K
Sbjct: 509 LEMDPNDDDAWYASASIFSKNGNKEEAL--YRLAKSIELDDSDK 550



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 5/148 (3%)

Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K+I +D   S     +G A  N  ++  AI  +D+ L+    +      +G A       
Sbjct: 405 KAIEIDPDFSSYWGNKGDALCNLERHDEAIECYDKALEISTDFGMYCNNKGNALCNLERY 464

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             AI  + + ++  P     W  +G A   L    EAI+   KALE +PN  D  +    
Sbjct: 465 NEAIECYDKTLEIYPDFSSCWNNKGNALYYLERYNEAIECYDKALEMDPNDDDAWYASAS 524

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSA 519
           +  K  +   A+  L+  ++LD  +K++
Sbjct: 525 IFSKNGNKEEALYRLAKSIELDDSDKNS 552


>gi|434388094|ref|YP_007098705.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
 gi|428019084|gb|AFY95178.1| TPR repeat-containing protein [Chamaesiphon minutus PCC 6605]
          Length = 779

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 126/264 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I     G++ SA++ + + L+  P         G       EL  AI+++T+A++ +
Sbjct: 459 NRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNYCQMGELALAIANYTQALELD 518

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  R       G+  EA+ D  +A+  +PN     + RGI + +  +  AA+ D
Sbjct: 519 PEFAVAYTNRANVYRIQGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQIGNHQAAIAD 578

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + L+ +   AY + G A   +G+   A   + + I  D N L A  +      +L 
Sbjct: 579 YTQTLALNSQYYYAYYHRGNARQYVGDKHGAIADYTQTIYFDPNHLHAHYNRAIVRSELH 638

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+E L++ + I   F++AY+ RG +L     H+ A+ D    + + P  ++  Y R
Sbjct: 639 DVQGAIEDLERAIAISPTFAQAYYQRGWVLSRNDDHQFALADYQRAIDLQPDYLDAYYYR 698

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
              YH++G+   AI D+  ++ ++
Sbjct: 699 GYSYHSLGDLSAAIADFSHSISID 722



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 111/235 (47%)

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           L  +P    + + RGTA+A   +   AI+D++ AI  NP    A+  RG  R  LG+   
Sbjct: 379 LLPNPTDALSYVMRGTAKAQLFDDNGAIADYSTAISLNPRLLVAYNNRGNLRQNLGDMDG 438

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           A+ D S  LE +P+SA   + R I+  +  +F +AV D    +++  E  S Y  LG   
Sbjct: 439 ALADFSAVLEIDPHSAIAYNNRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNY 498

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             +GE   A   + +A++LD  F  A+ +    Y+   +  +AL    + + +D      
Sbjct: 499 CQMGELALAIANYTQALELDPEFAVAYTNRANVYRIQGDCHEALTDYDRAIALDPNLVIG 558

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
           Y+ RG+    +G H+ AI D +  L ++       Y R +    +G+   AI DY
Sbjct: 559 YYNRGICHRQIGNHQAAIADYTQTLALNSQYYYAYYHRGNARQYVGDKHGAIADY 613



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 127/315 (40%), Gaps = 41/315 (13%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T I++   + VD    RG      G    A+S +D+ +  DP   +A  GRG AR +  +
Sbjct: 275 TEIARHVQLLVD----RGTEFYEVGNCQQALSAYDRAISLDPQCVDAYCGRGNARRYMGD 330

Query: 431 LEAAISDFTEAIQSNPSAGEAW-------------------------------------K 453
              +  DF+ A++ +P  G A+                                      
Sbjct: 331 YPGSWEDFSTAVELDPDRGIAYIGRALAACFKPQSDYRPNDDFERGKNLLPNPTDALSYV 390

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG A+A L +   AI D S A+   P      + RG +     D + A+ D SA +++D
Sbjct: 391 MRGTAKAQLFDDNGAIADYSTAISLNPRLLVAYNNRGNLRQNLGDMDGALADFSAVLEID 450

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
             +  AY    +  +  GE+  A   + +A+++    +  + +L   Y  +     A+  
Sbjct: 451 PHSAIAYNNRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNYCQMGELALAIAN 510

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             Q L +D  F+ AY  R  +    G   +A+ D    + +DP+ +   Y R  C+  IG
Sbjct: 511 YTQALELDPEFAVAYTNRANVYRIQGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQIG 570

Query: 634 EYREAIKDYDAALDL 648
            ++ AI DY   L L
Sbjct: 571 NHQAAIADYTQTLAL 585



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/330 (23%), Positives = 141/330 (42%), Gaps = 12/330 (3%)

Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           S +IS++ RL     +RG  + N G    A++ F  +L+ DP    A   R        E
Sbjct: 410 STAISLNPRLLVAYNNRGNLRQNLGDMDGALADFSAVLEIDPHSAIAYNNRAILYTQSGE 469

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
             +A++D+  A++  P     +   G     +GE   AI + ++ALE +P  A     R 
Sbjct: 470 FTSAVADYHRALEIQPELVSVYNNLGNNYCQMGELALAIANYTQALELDPEFAVAYTNRA 529

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            V     D + A+ D    + LD      Y   G+    IG ++ A   + + + L+  +
Sbjct: 530 NVYRIQGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQIGNHQAAIADYTQTLALNSQY 589

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ H     Q + +   A+    Q +Y D     A++ R ++   L   + AI+DL  
Sbjct: 590 YYAYYHRGNARQYVGDKHGAIADYTQTIYFDPNHLHAHYNRAIVRSELHDVQGAIEDLER 649

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
            + I P+  +  Y R        +++ A+ DY  A+DL+ D ++       A+Y +  + 
Sbjct: 650 AIAISPTFAQAYYQRGWVLSRNDDHQFALADYQRAIDLQPDYLD-------AYYYRGYSY 702

Query: 671 YTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           ++   +++    F     IDP +   + +R
Sbjct: 703 HSLGDLSAAIADFSHSISIDPKYAPAYYQR 732



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 99/214 (46%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G    A++ +D+ +  DP        RG         +AAI+D+T+ +  N     A+ 
Sbjct: 535 QGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQIGNHQAAIADYTQTLALNSQYYYAYY 594

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG AR  +G+   AI D ++ + F+PN     + R IV  +  D   A+EDL   + + 
Sbjct: 595 HRGNARQYVGDKHGAIADYTQTIYFDPNHLHAHYNRAIVRSELHDVQGAIEDLERAIAIS 654

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
                AY   G  LS   +++ A   + +AI L  ++L+A+ +    Y  L +   A+  
Sbjct: 655 PTFAQAYYQRGWVLSRNDDHQFALADYQRAIDLQPDYLDAYYYRGYSYHSLGDLSAAIAD 714

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
               + ID +++ AY+ RG +   +G    AI D
Sbjct: 715 FSHSISIDPKYAPAYYQRGKIYTQIGDITGAIAD 748



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 7/220 (3%)

Query: 377 KSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           ++I++D  L     +RGI     G + +AI+ + Q L  +  Y  A   RG AR +  + 
Sbjct: 547 RAIALDPNLVIGYYNRGICHRQIGNHQAAIADYTQTLALNSQYYYAYYHRGNARQYVGDK 606

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             AI+D+T+ I  +P+   A   R   R+ L +   AI+DL +A+   P  A   ++RG 
Sbjct: 607 HGAIADYTQTIYFDPNHLHAHYNRAIVRSELHDVQGAIEDLERAIAISPTFAQAYYQRGW 666

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V  +  D   A+ D    + L  +   AY Y G +  S+G+   A      +I +D  + 
Sbjct: 667 VLSRNDDHQFALADYQRAIDLQPDYLDAYYYRGYSYHSLGDLSAAIADFSHSISIDPKYA 726

Query: 552 EAWGHLTQFYQDLANSEKALECLQQV--LYIDKRFSKAYH 589
            A+    + Y  + +   A+    Q   LY+D+  SK Y 
Sbjct: 727 PAYYQRGKIYTQIGDITGAIADYHQAANLYLDRGDSKTYQ 766



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 118/262 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG A+        AI+ +   +  +P    A   RG  R    +++ A++DF+  ++ 
Sbjct: 390 VMRGTAKAQLFDDNGAIADYSTAISLNPRLLVAYNNRGNLRQNLGDMDGALADFSAVLEI 449

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P +  A+  R       GE   A+ D  +ALE +P    + +  G    +  +   A+ 
Sbjct: 450 DPHSAIAYNNRAILYTQSGEFTSAVADYHRALEIQPELVSVYNNLGNNYCQMGELALAIA 509

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           + +  ++LD E   AYT         G+  +A   + +AI LD N +  + +    ++ +
Sbjct: 510 NYTQALELDPEFAVAYTNRANVYRIQGDCHEALTDYDRAIALDPNLVIGYYNRGICHRQI 569

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N + A+    Q L ++ ++  AY+ RG     +G    AI D +  +  DP+++   Y 
Sbjct: 570 GNHQAAIADYTQTLALNSQYYYAYYHRGNARQYVGDKHGAIADYTQTIYFDPNHLHAHYN 629

Query: 625 RASCYHAIGEYREAIKDYDAAL 646
           RA     + + + AI+D + A+
Sbjct: 630 RAIVRSELHDVQGAIEDLERAI 651


>gi|296125246|ref|YP_003632498.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296017062|gb|ADG70299.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 349

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 122/232 (52%), Gaps = 3/232 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+ N GKY  A+  F+  LK D    +    +G       + + AI D+T++I+ + 
Sbjct: 42  RGLAKSNLGKYKEALDDFNTALKLDNNNADIYYNKGVTEYHMGDYDKAIEDYTKSIELDN 101

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S  + +  RG   +ALG+  +AI+D + A+E     +   + RG+     +DF +A++D 
Sbjct: 102 SIDDVYNNRGLCYSALGDFEKAIEDFTYAIELNNEDSQYYYNRGLAKDNLEDFESALDDY 161

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE--EAHLKAIQLDRNFLEAWGHLTQFYQDL 564
              ++++ +  +AY   G A + +  Y + +  + + KAI+LD N + A  +   +Y   
Sbjct: 162 DKAIEINPKYSNAYNNRGNAKAELN-YDEEDIIKDYDKAIELDNNNINAHFNKALYYDIN 220

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
            N E+AL    Q+L ID+ + + Y  R L+L+ L ++ ++IKD    + +D 
Sbjct: 221 ENYEQALNIYNQLLEIDEYYIEGYGNRALILYKLNKYDESIKDCDKAIELDS 272



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 121/243 (49%), Gaps = 2/243 (0%)

Query: 425 RAFQRE-LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
            AF  E  E AI    + I  N      +  RG A++ LG+  EA+ D + AL+ + N+A
Sbjct: 11  EAFDNEDYENAIEYCDKLIFYNGDNEGVYNYRGLAKSNLGKYKEALDDFNTALKLDNNNA 70

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
           DI + +G+  +   D++ A+ED +  ++LD      Y   GL  S++G+++KA E    A
Sbjct: 71  DIYYNKGVTEYHMGDYDKAIEDYTKSIELDNSIDDVYNNRGLCYSALGDFEKAIEDFTYA 130

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG-QHK 602
           I+L+    + + +      +L + E AL+   + + I+ ++S AY+ RG     L    +
Sbjct: 131 IELNNEDSQYYYNRGLAKDNLEDFESALDDYDKAIEINPKYSNAYNNRGNAKAELNYDEE 190

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
             IKD    + +D +NI   + +A  Y     Y +A+  Y+  L+++   +E +  + L 
Sbjct: 191 DIIKDYDKAIELDNNNINAHFNKALYYDINENYEQALNIYNQLLEIDEYYIEGYGNRALI 250

Query: 663 FYQ 665
            Y+
Sbjct: 251 LYK 253



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 10/104 (9%)

Query: 50  RNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
            N+ +A+ I + LL    Y I+   NRA    +L  +   I+DCDKA++LD      Y+ 
Sbjct: 221 ENYEQALNIYNQLLEIDEYYIEGYGNRALILYKLNKYDESIKDCDKAIELDSKYWLLYLN 280

Query: 109 KGCAFSALGRK---------EEALSVWEKGYEHALHQSADLKQF 143
           +      + +K         +E     +K YE AL    +L +F
Sbjct: 281 RAEIKLEVAKKNIDDFKKLNDEVFEDIKKSYELALEDEDNLNEF 324


>gi|401425919|ref|XP_003877444.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322493689|emb|CBZ28979.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 847

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/326 (23%), Positives = 144/326 (44%), Gaps = 6/326 (1%)

Query: 353 DMLK-ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKED 411
           DML+ ET  +++ ++    T  +    ++  +   RG+     G+  +A+ ++ + L+  
Sbjct: 380 DMLEAETWQQSEGSRAATRTATAGQPLLNEHYFYQRGLEHRRRGELEAAVHMYTKALELS 439

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P + +AL  R       +    AI D+T A+  +P         G +    G    A+Q 
Sbjct: 440 PTHFKALFNRAFCEDRLKNYTRAIEDYTAALDLDPRNPFTHYNLGISYDHKGSPARALQA 499

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            ++A+E +    D  H RG    K   + AA+ D +  + LD ++  ++       S +G
Sbjct: 500 FTRAIELDDRHPDFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSKLG 559

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
            Y++A   +  A+Q+  +   A+ +       L   E A+E     L ++ + + A + R
Sbjct: 560 RYEEAVAGYAAALQIVSDNANAYHNRGAALAKLGRLEAAVEDFNSALRLNPKLAFALNAR 619

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           GL+   L Q+ KA+ D +  + +D  N   L+ R   Y  +GE   AI DY A++ L   
Sbjct: 620 GLVYDQLQQYDKALADFTEAIRLDQRNPAWLHNRGYTYRNMGELELAIADYSASIKLAPH 679

Query: 652 SMEKFVLQCLAF-----YQKEIALYT 672
           S   +  +  AF     Y+  I  YT
Sbjct: 680 SHTAYTNRAFAFRKLGRYEAAIEDYT 705



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 124/268 (46%), Gaps = 1/268 (0%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF  +RG  Q  +G YA+AI+ +   +  DP + ++   R    +     E A++ +  A
Sbjct: 512 DFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVAGYAAA 571

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +Q       A+  RG A A LG    A++D + AL   P  A  L+ RG+V  + + ++ 
Sbjct: 572 LQIVSDNANAYHNRGAALAKLGRLEAAVEDFNSALRLNPKLAFALNARGLVYDQLQQYDK 631

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++LD+ N +     G    ++GE + A   +  +I+L  +   A+ +    +
Sbjct: 632 ALADFTEAIRLDQRNPAWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAF 691

Query: 562 QDLANSEKALECLQQVLYIDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           + L   E A+E   +VL       +K  + R      L   + AI+D +  L  DP N  
Sbjct: 692 RKLGRYEAAIEDYTKVLCEHPGVQTKVLNNRAYCFARLSLFEDAIRDYTEVLATDPVNAH 751

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
            LY R   +   G+Y  A+ D+  A+ L
Sbjct: 752 ALYNRGISFEKCGKYNAAVDDFTRAIRL 779



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 4/166 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    N G+   AI+ +   +K  P    A   R  A       EAAI D+T+ +  +
Sbjct: 652 NRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYEAAIEDYTKVLCEH 711

Query: 446 PSA-GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           P    +    R    A L    +AI+D ++ L  +P +A  L+ RGI   K   +NAAV+
Sbjct: 712 PGVQTKVLNNRAYCFARLSLFEDAIRDYTEVLATDPVNAHALYNRGISFEKCGKYNAAVD 771

Query: 505 DLSACVKLDKENKS---AYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           D +  ++L  E  S   +Y   G +   + +  +A E   +A++LD
Sbjct: 772 DFTRAIRLAPEAPSTANSYYSRGTSRLQLHQVPQATEDLKQALKLD 817



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 48/109 (44%), Gaps = 13/109 (11%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE-DPM------------YPEALIGRGTARAFQRE 430
           RL R  A V    YASA +  D  L+E DP               EAL  RG  RA   +
Sbjct: 49  RLLRAKAYVQLHDYASACADLDDWLQETDPTAHGINAGAAADRLTEALFYRGVCRARLSQ 108

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           ++ A++DFTE +Q  P    A   R    A L +   AI D   AL+ +
Sbjct: 109 VKDAVADFTEVLQRKPGHRRAHYERAACHARLDDFFNAIADYEAALQLD 157



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%)

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
           R ++A   RG+    L Q K A+ D +  L   P +    Y RA+C+  + ++  AI DY
Sbjct: 91  RLTEALFYRGVCRARLSQVKDAVADFTEVLQRKPGHRRAHYERAACHARLDDFFNAIADY 150

Query: 643 DAALDLELDSMEK 655
           +AAL L+    EK
Sbjct: 151 EAALQLDEVGREK 163


>gi|408674917|ref|YP_006874665.1| Tetratricopeptide TPR_1 repeat-containing protein [Emticicia
           oligotrophica DSM 17448]
 gi|387856541|gb|AFK04638.1| Tetratricopeptide TPR_1 repeat-containing protein [Emticicia
           oligotrophica DSM 17448]
          Length = 448

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 136/290 (46%), Gaps = 41/290 (14%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDP----MYPEALIGRGTARAFQRELEAAISDFTE 440
           L RG+ +     Y  AI  F ++++ +P    MY +A   RG  ++   + + +I+DFT+
Sbjct: 132 LYRGMTRAKLLDYRRAIQDFTKVVELNPEDDKMY-QAFFSRGACKSRLEDYQGSITDFTK 190

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI  NP   +++  RG +R  + +   +I+D  +A++  P  ++    RG    K +DF 
Sbjct: 191 AIDMNPKRSQSFASRGFSRLKINDFAGSIKDFDEAVKLNPEDSESYFNRGFAKTKIEDFR 250

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD------------- 547
            A+ D    ++LD +N  A+   G   S +G  K A     KAI++D             
Sbjct: 251 GAMNDYDKAIQLDPKNVRAFYGRGFCNSKLGNQKDATSDLTKAIEVDNMSIDSKVYYTGR 310

Query: 548 ---------RNFLEAWGHLTQFYQDLA--------------NSEKALECLQQVLYIDKRF 584
                    R+ ++    + +F +D +              + + A+  L + + ++  +
Sbjct: 311 ITKKTLDELRSVVQEKSRINEFSEDRSEAYYSRGISKFKSGDGKGAILDLNKSIELNPTY 370

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++AY  RGL+   +G  K+A++D S+ + ++P   E  Y+R    HA+G+
Sbjct: 371 AEAYFSRGLVRSSMGLQKEALQDCSNAIKLNPKYAEAYYVRGIIKHALGD 420



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 130/291 (44%), Gaps = 13/291 (4%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C+T+++  ++ S  F +  G+ +   G Y  A   +   +  +P    +   RG A+   
Sbjct: 16  CITKVNAQQTASEYFEI--GVNKSKAGDYIGASQAYSTAIAMNPENAASYYNRGLAKQQL 73

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++   AI DF   I  +P    A+  RG++++   +   A+QD ++ +E  P  A     
Sbjct: 74  KDHRGAILDFDRTIDLDPKNALAYLYRGKSKSEQDDHRSALQDYNRTIELNPEDAMAYLY 133

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL---GLALSSIGEYKKAEEAHLKAIQ 545
           RG+   K  D+  A++D +  V+L+ E+   Y      G   S + +Y+ +     KAI 
Sbjct: 134 RGMTRAKLLDYRRAIQDFTKVVELNPEDDKMYQAFFSRGACKSRLEDYQGSITDFTKAID 193

Query: 546 LDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           ++    +++   G       D A S K  +   + + ++   S++Y  RG     +   +
Sbjct: 194 MNPKRSQSFASRGFSRLKINDFAGSIKDFD---EAVKLNPEDSESYFNRGFAKTKIEDFR 250

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
            A+ D    + +DP N+   Y R  C   +G  ++A  D   A  +E+D+M
Sbjct: 251 GAMNDYDKAIQLDPKNVRAFYGRGFCNSKLGNQKDATSDLTKA--IEVDNM 299



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 2/226 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG +++    +A +I  FD+ +K +P   E+   RG A+    +   A++D+ +AIQ +
Sbjct: 204 SRGFSRLKINDFAGSIKDFDEAVKLNPEDSESYFNRGFAKTKIEDFRGAMNDYDKAIQLD 263

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDFNAAV 503
           P    A+  RG   + LG   +A  DL+KA+E +  S D  + +   I      +  + V
Sbjct: 264 PKNVRAFYGRGFCNSKLGNQKDATSDLTKAIEVDNMSIDSKVYYTGRITKKTLDELRSVV 323

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           ++ S   +  ++   AY   G++    G+ K A     K+I+L+  + EA+         
Sbjct: 324 QEKSRINEFSEDRSEAYYSRGISKFKSGDGKGAILDLNKSIELNPTYAEAYFSRGLVRSS 383

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           +   ++AL+     + ++ ++++AY++RG++ H LG       DLS
Sbjct: 384 MGLQKEALQDCSNAIKLNPKYAEAYYVRGIIKHALGDENAGCYDLS 429



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 53/97 (54%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           EA   RG ++    + + AI D  ++I+ NP+  EA+  RG  R+++G   EA+QD S A
Sbjct: 338 EAYYSRGISKFKSGDGKGAILDLNKSIELNPTYAEAYFSRGLVRSSMGLQKEALQDCSNA 397

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
           ++  P  A+  + RGI+     D NA   DLS   +L
Sbjct: 398 IKLNPKYAEAYYVRGIIKHALGDENAGCYDLSRAGEL 434



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRGI++   G    AI   ++ ++ +P Y EA   RG  R+     + A+ D + AI+ N
Sbjct: 342 SRGISKFKSGDGKGAILDLNKSIELNPTYAEAYFSRGLVRSSMGLQKEALQDCSNAIKLN 401

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
           P   EA+  RG  + ALG+      DLS+A E   ++A
Sbjct: 402 PKYAEAYYVRGIIKHALGDENAGCYDLSRAGELGYSAA 439



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 6/84 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           S++++ +A++ L+   ++SY      NR F  +++E  +  + D DKA+QLDP  ++A+ 
Sbjct: 218 SIKDFDEAVK-LNPEDSESY-----FNRGFAKTKIEDFRGAMNDYDKAIQLDPKNVRAFY 271

Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
            +G   S LG +++A S   K  E
Sbjct: 272 GRGFCNSKLGNQKDATSDLTKAIE 295


>gi|209526966|ref|ZP_03275483.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
 gi|209492568|gb|EDZ92906.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
          Length = 631

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 150/322 (46%), Gaps = 8/322 (2%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           I+ DF L +G A +NE +Y  AI+  D+ L+ +P   EA   +G A    ++   A+  +
Sbjct: 267 IADDF-LKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALECY 325

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
             A++  P   +AW  RG     L     A++  ++AL+ EPN   + H RG +  KF+ 
Sbjct: 326 DRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKFQK 385

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  A++     ++L+  +   +   G  LS +  Y++A  ++ +AIQ++    + W +  
Sbjct: 386 YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRG 445

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                +    +AL C +Q + ++ +  + +  +G +L  L +H++A+      + +   +
Sbjct: 446 MALCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSDS 505

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
            E    R     A+ +Y +A+ ++D  + L+ D+ +       A+ Q+ I L    + + 
Sbjct: 506 YEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQ-------AWCQRGICLEKMEQHDD 558

Query: 679 EFCWFDIDGDIDPLFKEYWCKR 700
               FD    + P   E W  R
Sbjct: 559 AIACFDTAIALKPDHAESWRHR 580



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 121/284 (42%), Gaps = 2/284 (0%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAF 427
           C  R  K +    D   +RG   V   +Y+ A+  ++Q LK +P        RG   R F
Sbjct: 324 CYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKF 383

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q+  E A+  +  AI+   +  E W  RG   + L    EAI    +A++  P   DI  
Sbjct: 384 QK-YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 442

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG+       ++ A+      + L+ +    +   G  L  +  +++A   + +AI L 
Sbjct: 443 NRGMALCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 502

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +  EAW    +    L   E+AL    +V+ +     +A+  RG+ L  + QH  AI  
Sbjct: 503 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIAC 562

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
             + + + P + E    R +    + +Y+EAI     A+ ++ D
Sbjct: 563 FDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKD 606


>gi|296127389|ref|YP_003634641.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019205|gb|ADG72442.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 425

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 147/301 (48%), Gaps = 7/301 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A+ N G Y  A+   D+ +  D    +A   R   +   ++   AI D+ + ++ + 
Sbjct: 109 RGFAKGNLGYYEEALKDIDKAIILDSTNIDAYSDRAFIKLVSKKYYEAIEDYKKVLELDD 168

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-NSADILHERGIVNFKFKDFNAAVED 505
               A+   G A+ ++G   EAI   +KA+E  P +SA   + RG+     K +N A+ D
Sbjct: 169 KDVYAYNGIGDAKRSIGLYEEAIFYYNKAIEISPASSAYAYNNRGVCKIGLKLYNEAILD 228

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           ++  +++  E   AY    +A  ++G Y+ + +   KAI+L+  +  A+ +       L 
Sbjct: 229 INKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELNAQYYYAYNNRGNSKSALG 288

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+      L I+  +  AY+ R L  + LG H+ A+KD       D +NI+  Y +
Sbjct: 289 LYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEYAVKDYDIVTEFDNNNIDAYYNK 348

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEK-----FVLQCLAFYQKEIALY-TASKINSE 679
           A  Y+ + +Y+EA+K+YD  ++L   S +      F   C+  YQ+ +  Y  A +IN +
Sbjct: 349 ALSYYNLSDYKEALKNYDKVIELNPQSADAYNNRGFTKYCMGLYQEALKDYDKAIEINPD 408

Query: 680 F 680
           +
Sbjct: 409 Y 409



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 134/275 (48%), Gaps = 1/275 (0%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S ++D    R   ++   KY  AI  + ++L+ D     A  G G A+      E AI  
Sbjct: 134 STNIDAYSDRAFIKLVSKKYYEAIEDYKKVLELDDKDVYAYNGIGDAKRSIGLYEEAIFY 193

Query: 438 FTEAIQSNP-SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           + +AI+ +P S+  A+  RG  +  L    EAI D++K+LE      D  + R I  +  
Sbjct: 194 YNKAIEISPASSAYAYNNRGVCKIGLKLYNEAILDINKSLEIYDEYTDAYNNRAIAKYNL 253

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
             +  +++D    ++L+ +   AY   G + S++G Y++A      A+ ++ ++++A+ +
Sbjct: 254 GLYEDSIKDFDKAIELNAQYYYAYNNRGNSKSALGLYEEAISDFDTALNIEPSYIDAYYN 313

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                 +L   E A++    V   D     AY+ + L  + L  +K+A+K+    + ++P
Sbjct: 314 RALAKNNLGLHEYAVKDYDIVTEFDNNNIDAYYNKALSYYNLSDYKEALKNYDKVIELNP 373

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            + +    R    + +G Y+EA+KDYD A+++  D
Sbjct: 374 QSADAYNNRGFTKYCMGLYQEALKDYDKAIEINPD 408



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 3/185 (1%)

Query: 369 CVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +  I+KS  I     D   +R IA+ N G Y  +I  FD+ ++ +  Y  A   RG ++
Sbjct: 225 AILDINKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELNAQYYYAYNNRGNSK 284

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           +     E AISDF  A+   PS  +A+  R  A+  LG    A++D     EF+ N+ D 
Sbjct: 285 SALGLYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEYAVKDYDIVTEFDNNNIDA 344

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + + +  +   D+  A+++    ++L+ ++  AY   G     +G Y++A + + KAI+
Sbjct: 345 YYNKALSYYNLSDYKEALKNYDKVIELNPQSADAYNNRGFTKYCMGLYQEALKDYDKAIE 404

Query: 546 LDRNF 550
           ++ ++
Sbjct: 405 INPDY 409



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 37/183 (20%)

Query: 524 GLALSSIGEYKKA--------------------------------EEA---HLKAIQLDR 548
           GL L   GEYKKA                                EEA   + KAI+ D 
Sbjct: 7   GLKLFKEGEYKKAVELFNKALNKEENTKSEIYNYLGLSENALGNFEEAINYYDKAIETDE 66

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N+ E + +      +L   E+A++   +V+ +    SKAY  RG     LG +++A+KD+
Sbjct: 67  NYAELYYNRANTKCNLGLYEEAVKDYDKVIELVPTHSKAYDDRGFAKGNLGYYEEALKDI 126

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
              + +D +NI+    RA       +Y EAI+DY     LELD  + +    +   ++ I
Sbjct: 127 DKAIILDSTNIDAYSDRAFIKLVSKKYYEAIEDYKKV--LELDDKDVYAYNGIGDAKRSI 184

Query: 669 ALY 671
            LY
Sbjct: 185 GLY 187



 Score = 46.6 bits (109), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 19/160 (11%)

Query: 58  ILDSLLAQSYEIQD-----ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCA 112
           ILD  + +S EI D       NRA     L L++  I+D DKA++L+     AY  +G +
Sbjct: 226 ILD--INKSLEIYDEYTDAYNNRAIAKYNLGLYEDSIKDFDKAIELNAQYYYAYNNRGNS 283

Query: 113 FSALGRKEEALSVW------EKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVS 166
            SALG  EEA+S +      E  Y  A +  A  K  L L E    A +D  +  E+D +
Sbjct: 284 KSALGLYEEAISDFDTALNIEPSYIDAYYNRALAKNNLGLHEY---AVKDYDIVTEFDNN 340

Query: 167 NSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRD 206
           N  +    + S  N +D   E  +N++K  + + + QS D
Sbjct: 341 NIDAYYNKALSYYNLSD-YKEALKNYDK--VIELNPQSAD 377



 Score = 40.0 bits (92), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDIC-NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
           +L N+ +AI   D  +       ++  NRA     L L++  ++D DK ++L PT  +AY
Sbjct: 47  ALGNFEEAINYYDKAIETDENYAELYYNRANTKCNLGLYEEAVKDYDKVIELVPTHSKAY 106

Query: 107 ILKGCAFSALGRKEEALSVWEKG 129
             +G A   LG  EEAL   +K 
Sbjct: 107 DDRGFAKGNLGYYEEALKDIDKA 129


>gi|443329566|ref|ZP_21058151.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
 gi|442790904|gb|ELS00406.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
          Length = 449

 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 105/198 (53%), Gaps = 2/198 (1%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           DP  P+  +  G  +  Q++   AI +F +A+ SNP+  +A   RG+A   L +    I+
Sbjct: 226 DP--PQDFVSVGRRKLNQKDYRGAIEEFNQALASNPNDLDALSGRGEAYYWLKDFPAVIK 283

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D    L   PN +  L  R   + +    + A+ D    +++D +N S Y   G++ S +
Sbjct: 284 DFDDVLRQNPNDSTFLWYRAYAHDELGKHHKAISDYDEAIRIDSDNASLYNSRGISYSKL 343

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           GEY KA   + +A++LD NF+EA+ +    Y +L   +KA+    +V+ +D + + AY+ 
Sbjct: 344 GEYDKAIADYNEALRLDPNFVEAYNNRGSSYINLGEYDKAITDYSEVIRLDSQHANAYYG 403

Query: 591 RGLLLHGLGQHKKAIKDL 608
           RG +   LG +++A++D 
Sbjct: 404 RGYIYQNLGDNQRAVQDF 421



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 5/215 (2%)

Query: 362 AKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           A RN     T I   +    DF +S G  ++N+  Y  AI  F+Q L  +P   +AL GR
Sbjct: 214 AARNNFAIPTNIDPPQ----DF-VSVGRRKLNQKDYRGAIEEFNQALASNPNDLDALSGR 268

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G A  + ++  A I DF + ++ NP+       R  A   LG+  +AI D  +A+  + +
Sbjct: 269 GEAYYWLKDFPAVIKDFDDVLRQNPNDSTFLWYRAYAHDELGKHHKAISDYDEAIRIDSD 328

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           +A + + RGI   K  +++ A+ D +  ++LD     AY   G +  ++GEY KA   + 
Sbjct: 329 NASLYNSRGISYSKLGEYDKAIADYNEALRLDPNFVEAYNNRGSSYINLGEYDKAITDYS 388

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
           + I+LD     A+      YQ+L ++++A++  QQ
Sbjct: 389 EVIRLDSQHANAYYGRGYIYQNLGDNQRAVQDFQQ 423



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 34/182 (18%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AI++ ++AL   PN  D L  RG   +  KDF A ++D    ++   +N +  T+L    
Sbjct: 247 AIEEFNQALASNPNDLDALSGRGEAYYWLKDFPAVIKDFDDVLR---QNPNDSTFL---- 299

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
                                 +  A+ H      +L    KA+    + + ID   +  
Sbjct: 300 ----------------------WYRAYAH-----DELGKHHKAISDYDEAIRIDSDNASL 332

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y+ RG+    LG++ KAI D +  L +DP+ +E    R S Y  +GEY +AI DY   + 
Sbjct: 333 YNSRGISYSKLGEYDKAIADYNEALRLDPNFVEAYNNRGSSYINLGEYDKAITDYSEVIR 392

Query: 648 LE 649
           L+
Sbjct: 393 LD 394



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 19/135 (14%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSY 67
           L K HK I + DE +R+DS  AS   +R I  +KL     ++ ++++A+R LD    ++Y
Sbjct: 309 LGKHHKAISDYDEAIRIDSDNASLYNSRGISYSKLGEYDKAIADYNEALR-LDPNFVEAY 367

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
                 NR   Y  L  +   I D  + ++LD     AY  +G  +  LG  + A+  ++
Sbjct: 368 N-----NRGSSYINLGEYDKAITDYSEVIRLDSQHANAYYGRGYIYQNLGDNQRAVQDFQ 422

Query: 128 KGYEHALHQSADLKQ 142
                   Q+ADL Q
Sbjct: 423 --------QAADLYQ 429



 Score = 46.2 bits (108), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 56/125 (44%)

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           +Y+ A E   +A+  + N L+A     + Y  L +    ++    VL  +   S     R
Sbjct: 243 DYRGAIEEFNQALASNPNDLDALSGRGEAYYWLKDFPAVIKDFDDVLRQNPNDSTFLWYR 302

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
                 LG+H KAI D    + ID  N      R   Y  +GEY +AI DY+ AL L+ +
Sbjct: 303 AYAHDELGKHHKAISDYDEAIRIDSDNASLYNSRGISYSKLGEYDKAIADYNEALRLDPN 362

Query: 652 SMEKF 656
            +E +
Sbjct: 363 FVEAY 367


>gi|428320334|ref|YP_007118216.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244014|gb|AFZ09800.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 560

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 3/262 (1%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           +AI+ FD+ ++ +  YPEA IGRG   +  R+ E AI+ F +AIQ NP+  EAW  RG A
Sbjct: 284 AAIACFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQINPNFPEAWLGRGIA 343

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE--- 515
            A L    EAI   S AL+ E N  +  + RG    K + +  A+      + L  E   
Sbjct: 344 LAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEI 403

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
                   G AL  + +Y++A  A+ + I++  +  EAW         L   E+AL    
Sbjct: 404 TSKVGLQQGAALEKLQQYEQAVAAYNRVIKIVPDNFEAWLKRGNALSKLQQYEQALASYD 463

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + I     + +  RGL+L  +  + +A+      + + P N E    R      +   
Sbjct: 464 RAITIWPDNYQGWVQRGLILGEMQNYSQALVAFDRVIQLKPDNWEAWAQRGDVLQKLQRT 523

Query: 636 REAIKDYDAALDLELDSMEKFV 657
           ++AI  Y  AL+++ D  E  V
Sbjct: 524 QDAISSYGVALEIKPDYYEALV 545



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 130/297 (43%), Gaps = 33/297 (11%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG   ++   ++ AI+ FD  ++ +    EA   RG      ++ +AA + +  A Q 
Sbjct: 101 MLRGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWDAAATCYKRATQL 160

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+    W R+G          EA+    +AL+  P + +    RG+   K + +  AV 
Sbjct: 161 HPNLPAMWYRQGNVLLQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAERYAEAVT 220

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------- 556
                ++L  +N  A+   G+A + + +Y +A  A+ + +Q+  N  EAW +        
Sbjct: 221 SYDRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAWFYKGMALKHQ 280

Query: 557 --------------LTQFY--------QDLANS---EKALECLQQVLYIDKRFSKAYHLR 591
                         +  FY        Q L+ S   E A+    Q + I+  F +A+  R
Sbjct: 281 WADAAIACFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQINPNFPEAWLGR 340

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           G+ L GL ++K+AI   S+ L I+ + +E   LR      + +Y EAI  +D  + L
Sbjct: 341 GIALAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISL 397



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 3/260 (1%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R  +  S   +  + RG        +  AI+ FDQ ++ +P +PEA +GRG A A  
Sbjct: 288 CFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQINPNFPEAWLGRGIALAGL 347

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN---SADI 485
              + AI  ++ A+Q   +  EAW  RG+A   L +  EAI    K +        ++ +
Sbjct: 348 ERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEITSKV 407

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
             ++G    K + +  AV   +  +K+  +N  A+   G ALS + +Y++A  ++ +AI 
Sbjct: 408 GLQQGAALEKLQQYEQAVAAYNRVIKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAIT 467

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +  +  + W        ++ N  +AL    +V+ +     +A+  RG +L  L + + AI
Sbjct: 468 IWPDNYQGWVQRGLILGEMQNYSQALVAFDRVIQLKPDNWEAWAQRGDVLQKLQRTQDAI 527

Query: 606 KDLSSGLGIDPSNIECLYLR 625
                 L I P   E L  R
Sbjct: 528 SSYGVALEIKPDYYEALVSR 547



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 77/362 (21%), Positives = 128/362 (35%), Gaps = 82/362 (22%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG      G+Y +A+  + + ++  P +  A +  G A          ++    A   NP
Sbjct: 35  RGNRLYASGRYEAAVLCYGKAVQIKPDWARAWLNLGKAYKQLHSYAETVACADRATAINP 94

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKAL------------------------------ 476
               AW  RG    +L    EAI     A+                              
Sbjct: 95  EEYWAWMLRGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWDAAATCY 154

Query: 477 ----EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
               +  PN   + + +G V  + + +  AV      +KL   N  A+   GLAL     
Sbjct: 155 KRATQLHPNLPAMWYRQGNVLLQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAER 214

Query: 533 YKKAEEAHLKAIQL----------------------------DR------NFLEAWGHLT 558
           Y +A  ++ +AIQL                            DR      N  EAW    
Sbjct: 215 YAEAVTSYDRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAW---- 270

Query: 559 QFYQDLA----NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            FY+ +A     ++ A+ C  + + I+  + +A+  RG  L      + AI      + I
Sbjct: 271 -FYKGMALKHQWADAAIACFDRAIQINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAIQI 329

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIA 669
           +P+  E    R      +  Y+EAI  Y  AL +E + +E +      L+ L  Y++ IA
Sbjct: 330 NPNFPEAWLGRGIALAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIA 389

Query: 670 LY 671
            +
Sbjct: 390 CF 391



 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 52/124 (41%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R+ K    + +  L RG A     +Y  A++ +D+ +   P   +  + RG      +  
Sbjct: 430 RVIKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAITIWPDNYQGWVQRGLILGEMQNY 489

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             A+  F   IQ  P   EAW +RG     L  + +AI     ALE +P+  + L  R  
Sbjct: 490 SQALVAFDRVIQLKPDNWEAWAQRGDVLQKLQRTQDAISSYGVALEIKPDYYEALVSREE 549

Query: 492 VNFK 495
           +  K
Sbjct: 550 LRLK 553


>gi|113475981|ref|YP_722042.1| hypothetical protein Tery_2349 [Trichodesmium erythraeum IMS101]
 gi|110167029|gb|ABG51569.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 649

 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 1/264 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI    +GKY  A++  +Q ++ +P Y +A   RG     Q + + A++D+ +AIQ N
Sbjct: 329 NRGIVYRKQGKYDLALADLNQAIQLNPKYADAYKNRGNVYYNQGKYDLALADYNQAIQLN 388

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA+  RG      G+   AI + ++A++  P  A   + RG+V      ++ A+ D
Sbjct: 389 PKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLNPKYAYAYNNRGVVYDDQGKYDLALAD 448

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+ +   AY   G      G+Y  A   + +AIQL+    EA+ +    Y+   
Sbjct: 449 YNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYNQAIQLNPKLAEAYNNRGAVYRKQG 508

Query: 566 NSEKALECLQQVLYIDK-RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             + AL    + + ++  +    Y+ RGL+ +   ++  A+ D S  + ++P +    Y 
Sbjct: 509 KYDLALADYNESIRLNNPQLWLPYNNRGLVYNDQRKYDLALADYSQAIQLNPKDAYAYYN 568

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R + Y   G+Y  AI DY  A+ L
Sbjct: 569 RGNVYDDQGKYDLAIADYSQAIQL 592



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 110/219 (50%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E E A++D+ +AIQ NP   +A+  RG      G+   A+ DL++A++  P  AD    R
Sbjct: 305 EFEQALADYNQAIQLNPKYADAYNNRGIVYRKQGKYDLALADLNQAIQLNPKYADAYKNR 364

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G V +    ++ A+ D +  ++L+ +   AY   GL     G+Y  A     +AIQL+  
Sbjct: 365 GNVYYNQGKYDLALADYNQAIQLNPKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLNPK 424

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           +  A+ +    Y D    + AL    Q + ++ ++++AY+ RG +    G++  AI D +
Sbjct: 425 YAYAYNNRGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYN 484

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             + ++P   E    R + Y   G+Y  A+ DY+ ++ L
Sbjct: 485 QAIQLNPKLAEAYNNRGAVYRKQGKYDLALADYNESIRL 523



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 1/264 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    N+GKY  A++ ++Q ++ +P Y EA   RG     Q + + AI++F +AIQ N
Sbjct: 363 NRGNVYYNQGKYDLALADYNQAIQLNPKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLN 422

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG      G+   A+ D ++A++  P  A+  + RG V  +   ++ A+ D
Sbjct: 423 PKYAYAYNNRGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIAD 482

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL-EAWGHLTQFYQDL 564
            +  ++L+ +   AY   G      G+Y  A   + ++I+L+   L   + +    Y D 
Sbjct: 483 YNQAIQLNPKLAEAYNNRGAVYRKQGKYDLALADYNESIRLNNPQLWLPYNNRGLVYNDQ 542

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              + AL    Q + ++ + + AY+ RG +    G++  AI D S  + ++P      Y 
Sbjct: 543 RKYDLALADYSQAIQLNPKDAYAYYNRGNVYDDQGKYDLAIADYSQAIQLNPKYANAYYT 602

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R           +AI D++ A DL
Sbjct: 603 RGLTNKDQRNMEKAISDFEKAADL 626



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 127/254 (50%), Gaps = 1/254 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           ++  A++ ++Q ++ +P Y +A   RG     Q + + A++D  +AIQ NP   +A+K R
Sbjct: 305 EFEQALADYNQAIQLNPKYADAYNNRGIVYRKQGKYDLALADLNQAIQLNPKYADAYKNR 364

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G      G+   A+ D ++A++  P  A+  + RG+V      ++ A+ + +  ++L+ +
Sbjct: 365 GNVYYNQGKYDLALADYNQAIQLNPKYAEAYNNRGLVYDDQGKYDLAIAEFNQAIQLNPK 424

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   G+     G+Y  A   + +AIQL+  + EA+ +    Y +    + A+    
Sbjct: 425 YAYAYNNRGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYN 484

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY-LRASCYHAIGE 634
           Q + ++ + ++AY+ RG +    G++  A+ D +  + ++   +   Y  R   Y+   +
Sbjct: 485 QAIQLNPKLAEAYNNRGAVYRKQGKYDLALADYNESIRLNNPQLWLPYNNRGLVYNDQRK 544

Query: 635 YREAIKDYDAALDL 648
           Y  A+ DY  A+ L
Sbjct: 545 YDLALADYSQAIQL 558



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 1/131 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +RG     +GKY  A++ +++ ++  +P        RG     QR+ + A++D+++AIQ 
Sbjct: 499 NRGAVYRKQGKYDLALADYNESIRLNNPQLWLPYNNRGLVYNDQRKYDLALADYSQAIQL 558

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A+  RG      G+   AI D S+A++  P  A+  + RG+ N   ++   A+ 
Sbjct: 559 NPKDAYAYYNRGNVYDDQGKYDLAIADYSQAIQLNPKYANAYYTRGLTNKDQRNMEKAIS 618

Query: 505 DLSACVKLDKE 515
           D      L K+
Sbjct: 619 DFEKAADLYKQ 629


>gi|423064909|ref|ZP_17053699.1| putative TPR repeat protein [Arthrospira platensis C1]
 gi|406714152|gb|EKD09320.1| putative TPR repeat protein [Arthrospira platensis C1]
          Length = 631

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 150/322 (46%), Gaps = 8/322 (2%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           I+ DF L +G A +NE +Y  AI+  D+ L+ +P   EA   +G A    ++   A+  +
Sbjct: 267 IADDF-LKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALECY 325

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
             A++  P   +AW  RG     L     A++  ++AL+ EPN   + H RG +  KF+ 
Sbjct: 326 DRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKFQK 385

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  A++     ++L+  +   +   G  LS +  Y++A  ++ +AIQ++    + W +  
Sbjct: 386 YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRG 445

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                +    +AL C +Q + ++ +  + +  +G +L  L +H++A+      + +   +
Sbjct: 446 MDLCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLKSDS 505

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
            E    R     A+ +Y +A+ ++D  + L+ D+ +       A+ Q+ I L    + + 
Sbjct: 506 YEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQ-------AWCQRGICLEKMEQHDD 558

Query: 679 EFCWFDIDGDIDPLFKEYWCKR 700
               FD    + P   E W  R
Sbjct: 559 AIACFDTAIALKPDHAESWRHR 580



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 121/284 (42%), Gaps = 2/284 (0%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAF 427
           C  R  K +    D   +RG   V   +Y+ A+  ++Q LK +P        RG   R F
Sbjct: 324 CYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNQALKIEPNDYAVWHNRGALLRKF 383

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q+  E A+  +  AI+   +  E W  RG   + L    EAI    +A++  P   DI  
Sbjct: 384 QK-YEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 442

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG+       ++ A+      + L+ +    +   G  L  +  +++A   + +AI L 
Sbjct: 443 NRGMDLCHIHQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 502

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +  EAW    +    L   E+AL    +V+ +     +A+  RG+ L  + QH  AI  
Sbjct: 503 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIAC 562

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
             + + + P + E    R +    + +Y+EAI     A+ ++ D
Sbjct: 563 FDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKD 606


>gi|320101816|ref|YP_004177407.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
 gi|319749098|gb|ADV60858.1| serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
          Length = 923

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 123/283 (43%), Gaps = 36/283 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+A    G    AI  +  +L+ DP    AL+ RG     + E E AI D+ EAI+ 
Sbjct: 589 FNRGLALRARGMELEAIQDYTSVLEIDPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRL 648

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG A +A G+   AI D ++++E EP +    + RG        F  ++ 
Sbjct: 649 APDHALAHLNRGYAFSAQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIP 708

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ-LDRNFLEAWGHLTQFYQD 563
           D +  + LD E+ SAY     AL S+G   +A E + +A+Q L R+              
Sbjct: 709 DFTQAIALDPEDGSAYANRAFALHSLGAVAQAIEDYTQALQRLGRD-------------- 754

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
                                +  Y+ RG+     G H+ AI D +  L I PS++    
Sbjct: 755 ---------------------ASTYYNRGVAHRDRGDHRAAIDDFAEALRIQPSDVAAAV 793

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
             A C  A+G+   A+ D + A+ L+ D  E ++++     Q+
Sbjct: 794 NLAVCRQAVGDLERALADLNEAIRLDPDEAEIYLIRGRLHLQR 836



 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 5/274 (1%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            ++ L+ +P  P  ++ RG      R  E AI+D++ AI+ +P   E +++R  A   +G
Sbjct: 472 IEERLQREPDRPRHVLRRGDLFLKHRAYEQAIADYSRAIRLDPREPEGFRKRALAYRLMG 531

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
           +  +AI+D S  +E  P       +RG    +  D++ A+ D S  ++LD    S Y   
Sbjct: 532 DFEQAIRDGSTLIELSPRDPTAYLQRGYSYHQIGDYDRAIADYSKAIRLDPGETSGYFNR 591

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GLAL + G   +A + +   +++D   + A  +    Y+     EKA+    + + +   
Sbjct: 592 GLALRARGMELEAIQDYTSVLEIDPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPD 651

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            + A+  RG      G H++AI D +  + ++P N    Y R   +  +G++  +I D+ 
Sbjct: 652 HALAHLNRGYAFSAQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFT 711

Query: 644 AALDLELD-----SMEKFVLQCLAFYQKEIALYT 672
            A+ L+ +     +   F L  L    + I  YT
Sbjct: 712 QAIALDPEDGSAYANRAFALHSLGAVAQAIEDYT 745



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 4/264 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   +    Y  AI+ + + ++ DP  PE    R  A     + E AI D +  I+ 
Sbjct: 487 LRRGDLFLKHRAYEQAIADYSRAIRLDPREPEGFRKRALAYRLMGDFEQAIRDGSTLIEL 546

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+ +RG +   +G+   AI D SKA+  +P        RG+          A++
Sbjct: 547 SPRDPTAYLQRGYSYHQIGDYDRAIADYSKAIRLDPGETSGYFNRGLALRARGMELEAIQ 606

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D ++ +++D ++ SA    G      GE++KA   + +AI+L  +   A  HL + Y   
Sbjct: 607 DYTSVLEIDPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPD--HALAHLNRGYAFS 664

Query: 565 ANS--EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           A    E+A+    + + ++ R   AY+ RG     LGQ  ++I D +  + +DP +    
Sbjct: 665 AQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIALDPEDGSAY 724

Query: 623 YLRASCYHAIGEYREAIKDYDAAL 646
             RA   H++G   +AI+DY  AL
Sbjct: 725 ANRAFALHSLGAVAQAIEDYTQAL 748



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 111/228 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG A   +G +  AI+ F + ++ +P  P A   RG A     +   +I DFT+AI  
Sbjct: 657 LNRGYAFSAQGDHERAIADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIAL 716

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P  G A+  R  A  +LG   +AI+D ++AL+     A   + RG+ +    D  AA++
Sbjct: 717 DPEDGSAYANRAFALHSLGAVAQAIEDYTQALQRLGRDASTYYNRGVAHRDRGDHRAAID 776

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  +++   + +A   L +   ++G+ ++A     +AI+LD +  E +    + +   
Sbjct: 777 DFAEALRIQPSDVAAAVNLAVCRQAVGDLERALADLNEAIRLDPDEAEIYLIRGRLHLQR 836

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +  +A       L ++     A  LRGL L  LG+   A+ DLS  L
Sbjct: 837 GDPTQAAADFAAALKLNPDLPSALRLRGLALFKLGKRLTALLDLSRSL 884



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 105/261 (40%), Gaps = 49/261 (18%)

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           D  E +Q  P       RRG          +AI D S+A+  +P   +   +R +     
Sbjct: 471 DIEERLQREPDRPRHVLRRGDLFLKHRAYEQAIADYSRAIRLDPREPEGFRKRALAYRLM 530

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
            DF  A+ D S  ++L   + +AY   G +   IG+Y +A   + KAI+LD       G 
Sbjct: 531 GDFEQAIRDGSTLIELSPRDPTAYLQRGYSYHQIGDYDRAIADYSKAIRLD------PGE 584

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
            + ++                             RGL L   G   +AI+D +S L IDP
Sbjct: 585 TSGYFN----------------------------RGLALRARGMELEAIQDYTSVLEIDP 616

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
            ++  L  R   Y   GE+ +AI+DYD A+ L  D     + +  AF     +++ IA +
Sbjct: 617 KDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALAHLNRGYAFSAQGDHERAIADF 676

Query: 672 T----------ASKINSEFCW 682
           T          A+  N  F W
Sbjct: 677 TRSIELEPRNPAAYYNRGFAW 697



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 127/269 (47%), Gaps = 14/269 (5%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG      G++  AI  +D+ ++  P +  A + RG A + Q + E AI+DFT +I+ 
Sbjct: 623 VNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALAHLNRGYAFSAQGDHERAIADFTRSIEL 682

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFK 497
            P    A+  RG A   LG+   +I D ++A+  +P       N A  LH  G V    +
Sbjct: 683 EPRNPAAYYNRGFAWTCLGQFARSIPDFTQAIALDPEDGSAYANRAFALHSLGAVAQAIE 742

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           D+  A++ L         + S Y   G+A    G+++ A +   +A+++  + + A  +L
Sbjct: 743 DYTQALQRLG-------RDASTYYNRGVAHRDRGDHRAAIDDFAEALRIQPSDVAAAVNL 795

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
               Q + + E+AL  L + + +D   ++ Y +RG L    G   +A  D ++ L ++P 
Sbjct: 796 AVCRQAVGDLERALADLNEAIRLDPDEAEIYLIRGRLHLQRGDPTQAAADFAAALKLNPD 855

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAAL 646
               L LR      +G+   A+ D   +L
Sbjct: 856 LPSALRLRGLALFKLGKRLTALLDLSRSL 884



 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 27/172 (15%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASA-----ITARIELAKLCSLRNWSKAIRILDSLL 63
           S +++    + I +  + +R+D    S      +  R    +L ++++++  + I     
Sbjct: 560 SYHQIGDYDRAIADYSKAIRLDPGETSGYFNRGLALRARGMELEAIQDYTSVLEI----- 614

Query: 64  AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
               ++  + NR F Y      +  IRD D+A++L P    A++ +G AFSA G  E A+
Sbjct: 615 -DPKDVSALVNRGFTYRLRGEFEKAIRDYDEAIRLAPDHALAHLNRGYAFSAQGDHERAI 673

Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSV--TCEYDVSNSMSSLT 173
                         AD  + +ELE    AA  +R    TC    + S+   T
Sbjct: 674 --------------ADFTRSIELEPRNPAAYYNRGFAWTCLGQFARSIPDFT 711


>gi|428210636|ref|YP_007083780.1| serine/threonine protein kinase [Oscillatoria acuminata PCC 6304]
 gi|427999017|gb|AFY79860.1| serine/threonine protein kinase [Oscillatoria acuminata PCC 6304]
          Length = 702

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 137/278 (49%), Gaps = 5/278 (1%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           +A+  +D+ ++ +P Y +A I RG      +  + AI+ F +AI+  P + EAW  +G  
Sbjct: 386 AAMDAYDRAIQLNPEYLDAWIRRGDVLNRLQRYDGAIASFEKAIELVPESAEAWNGKGNT 445

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
             +L    EAI    +ALEF+P S++  + RG    + KD+ AA++     V+   +   
Sbjct: 446 LLSLQRYEEAIAAYDQALEFQPESSEAWYARGWAFHQLKDYEAALKSYDKSVEYQFDYAV 505

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
            +   G  L  + + K+A E++ KA++   N+ EAW         L ++ +A +  ++ +
Sbjct: 506 GWYNRGNVLMQLNQAKEAVESYDKAVRFQPNYAEAWYSRGNALMQLNDASEAAKSYERAV 565

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            +   + +A++  G  LH L ++++AI+  +  + +   +    Y R +  + +  Y+EA
Sbjct: 566 KLQTNYQEAWYSLGWALHQLRRYEQAIEAYNQAIDLKKIDYRAWYNRGNALYNLNRYQEA 625

Query: 639 IKDYDAALDLELDSMEKFV-----LQCLAFYQKEIALY 671
           +  Y+ A  ++ D  E +      L  L  Y++ I  Y
Sbjct: 626 VSSYNEAAYVKPDHAESWYGKGNSLSTLGQYEEAILAY 663



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 34/251 (13%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI+ +DQ L+  P   EA   RG A    ++ EAA+  + ++++        W  R
Sbjct: 451 RYEEAIAAYDQALEFQPESSEAWYARGWAFHQLKDYEAALKSYDKSVEYQFDYAVGWYNR 510

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L ++ EA++   KA+ F+PN A+  + RG    +  D + A +     VKL   
Sbjct: 511 GNVLMQLNQAKEAVESYDKAVRFQPNYAEAWYSRGNALMQLNDASEAAKSYERAVKLQTN 570

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
            + A+  LG AL  +  Y++A EA+ +AI L +                           
Sbjct: 571 YQEAWYSLGWALHQLRRYEQAIEAYNQAIDLKK--------------------------- 603

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
               ID R   A++ RG  L+ L ++++A+   +    + P + E  Y + +    +G+Y
Sbjct: 604 ----IDYR---AWYNRGNALYNLNRYQEAVSSYNEAAYVKPDHAESWYGKGNSLSTLGQY 656

Query: 636 REAIKDYDAAL 646
            EAI  YD AL
Sbjct: 657 EEAILAYDRAL 667



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 96/220 (43%), Gaps = 8/220 (3%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N++++ H+ G   +    +  A++     +++  +   A+   G  LS + + + A +A+
Sbjct: 333 NASELYHQ-GHTLYHLSRYEEALKRYENAIEIKADYVEAWKEKGDTLSRLNQNEAAMDAY 391

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AIQL+  +L+AW         L   + A+   ++ + +    ++A++ +G  L  L +
Sbjct: 392 DRAIQLNPEYLDAWIRRGDVLNRLQRYDGAIASFEKAIELVPESAEAWNGKGNTLLSLQR 451

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
           +++AI      L   P + E  Y R   +H +       KDY+AAL     S+E      
Sbjct: 452 YEEAIAAYDQALEFQPESSEAWYARGWAFHQL-------KDYEAALKSYDKSVEYQFDYA 504

Query: 661 LAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           + +Y +   L   ++       +D      P + E W  R
Sbjct: 505 VGWYNRGNVLMQLNQAKEAVESYDKAVRFQPNYAEAWYSR 544



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 34/232 (14%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A      Y +A+  +D+ ++    Y      RG       + + A+  + +A++  
Sbjct: 475 ARGWAFHQLKDYEAALKSYDKSVEYQFDYAVGWYNRGNVLMQLNQAKEAVESYDKAVRFQ 534

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EAW  RG A   L ++ EA +   +A                              
Sbjct: 535 PNYAEAWYSRGNALMQLNDASEAAKSYERA------------------------------ 564

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               VKL    + A+  LG AL  +  Y++A EA+ +AI L +    AW +      +L 
Sbjct: 565 ----VKLQTNYQEAWYSLGWALHQLRRYEQAIEAYNQAIDLKKIDYRAWYNRGNALYNLN 620

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             ++A+    +  Y+    +++++ +G  L  LGQ+++AI      L   P+
Sbjct: 621 RYQEAVSSYNEAAYVKPDHAESWYGKGNSLSTLGQYEEAILAYDRALRYQPN 672


>gi|17232418|ref|NP_488966.1| hypothetical protein all4926 [Nostoc sp. PCC 7120]
 gi|17134064|dbj|BAB76625.1| all4926 [Nostoc sp. PCC 7120]
          Length = 1273

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 121/271 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+ Q  +G    AI+ ++Q ++ +P   E    RG           AI+ + +AI+  P
Sbjct: 380 QGLQQAKQGDLLGAIANYEQAIQLNPSSYEYWFNRGLTLFHLERFVEAIASYDQAIEIKP 439

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG     LG   EA+  L +A+  +P+       +G    K      A+   
Sbjct: 440 DYYKAWYNRGGTLGQLGLYEEAVASLKQAISIQPDMPGAWSSKGWAELKLGQIGEAIASY 499

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + L  E++  + Y G+AL    +Y+ A +++ KA+++  +F E W        +L  
Sbjct: 500 DEALLLSPEDQENWYYRGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLGQ 559

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+    Q L I   F  A++ RG+ L  LG+  +AI      + I P      Y +A
Sbjct: 560 WSEAIASWDQALSIQADFYLAWYNRGVALENLGRRAEAIASYKQAIEIKPDFHLAWYNQA 619

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                +  + EAI  YD AL ++LD  E ++
Sbjct: 620 VALFYLERFLEAIVCYDNALQIKLDYWEAWI 650



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 6/175 (3%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL---GLALSSIGEYKKAEEAHLK 542
           L  +G+   K  D   A+ +    ++L   N S+Y Y    GL L  +  + +A  ++ +
Sbjct: 377 LFYQGLQQAKQGDLLGAIANYEQAIQL---NPSSYEYWFNRGLTLFHLERFVEAIASYDQ 433

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           AI++  ++ +AW +       L   E+A+  L+Q + I      A+  +G     LGQ  
Sbjct: 434 AIEIKPDYYKAWYNRGGTLGQLGLYEEAVASLKQAISIQPDMPGAWSSKGWAELKLGQIG 493

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           +AI      L + P + E  Y R        +Y  AI  YD AL+++ D  E ++
Sbjct: 494 EAIASYDEALLLSPEDQENWYYRGIALGVDEQYEAAIDSYDKALEIQPDFHEVWI 548



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 66/146 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA   + +Y +AI  +D+ L+  P + E  I RG       +   AI+ + +A+    
Sbjct: 516 RGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLGQWSEAIASWDQALSIQA 575

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  RG A   LG   EAI    +A+E +P+     + + +  F  + F  A+   
Sbjct: 576 DFYLAWYNRGVALENLGRRAEAIASYKQAIEIKPDFHLAWYNQAVALFYLERFLEAIVCY 635

Query: 507 SACVKLDKENKSAYTYLGLALSSIGE 532
              +++  +   A+   G A+ ++ E
Sbjct: 636 DNALQIKLDYWEAWIGRGTAIGNLNE 661


>gi|119487888|ref|ZP_01621385.1| O-linked GlcNAc transferase [Lyngbya sp. PCC 8106]
 gi|119455464|gb|EAW36602.1| O-linked GlcNAc transferase [Lyngbya sp. PCC 8106]
          Length = 614

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 168/401 (41%), Gaps = 23/401 (5%)

Query: 276 QSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISD 335
           Q S +F        +AS+ E    Q N    +H KL SD  S + SN      + +S ++
Sbjct: 171 QDSINFLTQEASASQASIEELKQLQLNLIESLH-KLKSDFKSKDHSNLIQFPGANNSHNN 229

Query: 336 NKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG 395
               +   S     F W                   + + S  +  D  L +G A  N+ 
Sbjct: 230 LPKRNQLNSNFPSEFDWSF-----------------QFNSSPDLIADDYLKQGEALNNDK 272

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y+ A+  F++  K +P   EA   +G           A+  + + +Q +P   EAW  R
Sbjct: 273 RYSEALISFEKAAKMNPNLEEAWYNQGNILVRLNRYNEALKAYEKVVQIHPQKYEAWYNR 332

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L    EA++    AL  +PN  +  H RG +  KFK ++ A+      +++   
Sbjct: 333 GNVLVKLKRYSEALESYDHALAIQPNDDEAWHNRGALLRKFKRYDEALTSYDKALEIQPN 392

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
               +   G  L  +  Y++A  ++ +AI +D    E W +       L   E+A+   +
Sbjct: 393 KYETWHNRGNVLGKLKRYEEAIISYDRAITIDAGKREVWLNRAVALCKLKRYEQAIASFE 452

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           Q + +D    + +++R  LLH LG++ +AI    + +   P+  E    + S    + +Y
Sbjct: 453 QAIGLDPTSPELWNMRASLLHQLGRYSEAIDSFENAIEHQPNCYEAWLGKGSVLVQLKQY 512

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
            EA++ Y+ A+ ++ ++ E +  + L F     Y   IA Y
Sbjct: 513 SEALETYEKAITIQPEASEAWRHKGLLFEKLEQYPDAIAAY 553


>gi|338810665|ref|ZP_08622906.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
 gi|337277347|gb|EGO65743.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
           6540]
          Length = 329

 Score =  104 bits (259), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 118/256 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A   +G Y  AI+ + Q++      PE    RG     + + + AI+D+ +AI  NP
Sbjct: 47  QGTAYAAQGDYDHAIAAYSQVIALQLQVPETYNSRGIVYIKKGDYDRAIADYDQAIALNP 106

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG A  A G   +AI D S+A+   P +A   + RG    K   ++ A+ D 
Sbjct: 107 KFASAYNNRGVAYYAKGHYDQAIADHSQAVALNPKNAGAYYNRGNAYGKNDQYDRAIADY 166

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + L+ ++ +AY   G+     G+Y +A + H +AI L+     A+ +    Y     
Sbjct: 167 TQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDDHTQAIALEPKRATAYNNRGIAYTKKGQ 226

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+    Q + ++ + + AY+ RG+     G + +AI   +  + +DP   E  Y +A
Sbjct: 227 YNRAIADFDQAILLNPKDAMAYYNRGITYADKGDYTRAIVTYNRAIALDPHYAEAYYQKA 286

Query: 627 SCYHAIGEYREAIKDY 642
                 G   EA + Y
Sbjct: 287 VACEKAGRLPEAAESY 302



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 106/219 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRGI  + +G Y  AI+ +DQ +  +P +  A   RG A   +   + AI+D ++A+  N
Sbjct: 80  SRGIVYIKKGDYDRAIADYDQAIALNPKFASAYNNRGVAYYAKGHYDQAIADHSQAVALN 139

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A     +   AI D ++A+   P        RG++  K   ++ A++D
Sbjct: 140 PKNAGAYYNRGNAYGKNDQYDRAIADYTQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDD 199

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + L+ +  +AY   G+A +  G+Y +A     +AI L+     A+ +    Y D  
Sbjct: 200 HTQAIALEPKRATAYNNRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKG 259

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           +  +A+    + + +D  +++AY+ + +     G+  +A
Sbjct: 260 DYTRAIVTYNRAIALDPHYAEAYYQKAVACEKAGRLPEA 298



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/159 (27%), Positives = 68/159 (42%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A     +Y  AI+ + Q +  +P +  A   RG     + + + AI D T+AI   
Sbjct: 148 NRGNAYGKNDQYDRAIADYTQAIALNPKHVAAYDNRGMLYKKKGQYDQAIDDHTQAIALE 207

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A    G+   AI D  +A+   P  A   + RGI      D+  A+  
Sbjct: 208 PKRATAYNNRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKGDYTRAIVT 267

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
            +  + LD     AY    +A    G   +A E++ K I
Sbjct: 268 YNRAIALDPHYAEAYYQKAVACEKAGRLPEAAESYHKFI 306



 Score = 43.5 bits (101), Expect = 0.60,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 45/99 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA   +G+Y  AI+ FDQ +  +P    A   RG   A + +   AI  +  AI  +
Sbjct: 216 NRGIAYTKKGQYNRAIADFDQAILLNPKDAMAYYNRGITYADKGDYTRAIVTYNRAIALD 275

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           P   EA+ ++  A    G   EA +   K + +     D
Sbjct: 276 PHYAEAYYQKAVACEKAGRLPEAAESYHKFILYASTQDD 314


>gi|254425548|ref|ZP_05039265.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
 gi|196187971|gb|EDX82936.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
           7335]
          Length = 274

 Score =  104 bits (259), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 65/192 (33%), Positives = 101/192 (52%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           +L+ +G   A Q +LE AIS +  AIQ++P   EA++ RG A   LG   +AI D S AL
Sbjct: 51  SLVEQGRQEAEQGQLEEAISTYNRAIQADPQNAEAYRYRGLAYHDLGNYSQAIDDFSTAL 110

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           +F+PN  + L+ RG       D NAA+ DLS  ++L  +    Y    + L+  G++  A
Sbjct: 111 QFQPNDPETLYHRGEAYSHTPDINAALSDLSQAIELAPDFVQPYIDRSIILAVTGQFPLA 170

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
                 AI L  +  +A+ +  + Y +L N+E AL      + +    ++A+  RGLL +
Sbjct: 171 LSDLDSAISLAPDNADAYYNRGKVYTELGNAEAALTDFGTAIELAPNLAEAFGNRGLLHY 230

Query: 597 GLGQHKKAIKDL 608
            LG    AI+DL
Sbjct: 231 QLGDSNAAIEDL 242



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 58/197 (29%), Positives = 94/197 (47%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S +  + +G  +  +G+   AIS +++ ++ DP   EA   RG A         AI DF+
Sbjct: 48  STNSLVEQGRQEAEQGQLEEAISTYNRAIQADPQNAEAYRYRGLAYHDLGNYSQAIDDFS 107

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            A+Q  P+  E    RG+A +   +   A+ DLS+A+E  P+      +R I+      F
Sbjct: 108 TALQFQPNDPETLYHRGEAYSHTPDINAALSDLSQAIELAPDFVQPYIDRSIILAVTGQF 167

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ DL + + L  +N  AY   G   + +G  + A      AI+L  N  EA+G+   
Sbjct: 168 PLALSDLDSAISLAPDNADAYYNRGKVYTELGNAEAALTDFGTAIELAPNLAEAFGNRGL 227

Query: 560 FYQDLANSEKALECLQQ 576
            +  L +S  A+E LQQ
Sbjct: 228 LHYQLGDSNAAIEDLQQ 244



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 55/209 (26%), Positives = 89/209 (42%)

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           +ARA   +     Q    ++     S + L E+G    +      A+   +  ++ D +N
Sbjct: 23  RARATEHKKAVYAQLPQSSIHIAVTSTNSLVEQGRQEAEQGQLEEAISTYNRAIQADPQN 82

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY Y GLA   +G Y +A +    A+Q   N  E   H  + Y    +   AL  L Q
Sbjct: 83  AEAYRYRGLAYHDLGNYSQAIDDFSTALQFQPNDPETLYHRGEAYSHTPDINAALSDLSQ 142

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            + +   F + Y  R ++L   GQ   A+ DL S + + P N +  Y R   Y  +G   
Sbjct: 143 AIELAPDFVQPYIDRSIILAVTGQFPLALSDLDSAISLAPDNADAYYNRGKVYTELGNAE 202

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            A+ D+  A++L  +  E F  + L  YQ
Sbjct: 203 AALTDFGTAIELAPNLAEAFGNRGLLHYQ 231



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 4/176 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  + G Y+ AI  F   L+  P  PE L  RG A +   ++ AA+SD ++AI+  P
Sbjct: 89  RGLAYHDLGNYSQAIDDFSTALQFQPNDPETLYHRGEAYSHTPDINAALSDLSQAIELAP 148

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              + +  R    A  G+   A+ DL  A+   P++AD  + RG V  +  +  AA+ D 
Sbjct: 149 DFVQPYIDRSIILAVTGQFPLALSDLDSAISLAPDNADAYYNRGKVYTELGNAEAALTDF 208

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
              ++L      A+   GL    +G+      A ++ +Q   N  +A G    + Q
Sbjct: 209 GTAIELAPNLAEAFGNRGLLHYQLGD----SNAAIEDLQQAANLFQARGDQQSYQQ 260



 Score = 49.3 bits (116), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 10/124 (8%)

Query: 370 VTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           ++ +S++  ++ DF    + R I     G++  A+S  D  +   P   +A   RG    
Sbjct: 137 LSDLSQAIELAPDFVQPYIDRSIILAVTGQFPLALSDLDSAISLAPDNADAYYNRGKVYT 196

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
                EAA++DF  AI+  P+  EA+  RG     LG+S  AI+DL +A       A++ 
Sbjct: 197 ELGNAEAALTDFGTAIELAPNLAEAFGNRGLLHYQLGDSNAAIEDLQQA-------ANLF 249

Query: 487 HERG 490
             RG
Sbjct: 250 QARG 253


>gi|427730743|ref|YP_007076980.1| Flp pilus assembly protein TadD [Nostoc sp. PCC 7524]
 gi|427366662|gb|AFY49383.1| Flp pilus assembly protein TadD [Nostoc sp. PCC 7524]
          Length = 521

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 131/275 (47%), Gaps = 2/275 (0%)

Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
           ++ + + + F L   +    E  + +AIS +DQ LK  P   EA   RG A       E 
Sbjct: 219 TEDRKVGLLFELGNLLYAAKE--FEAAISSYDQALKFKPDKHEAWYNRGIALRNLGRNEE 276

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AIS + ++++ NP   +AW  RG     LG + EAI    +A++ +P+  +  + RGI  
Sbjct: 277 AISSYDQSVKFNPDDHQAWNNRGNTLFNLGRNEEAISSYDQAVKIKPDKHETWNNRGIAL 336

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
                   A+      +K   +   A+   G+AL ++G  ++A  ++ +A++   +F EA
Sbjct: 337 RNLGRNEEAISSYDQALKFQPDLHQAWNNRGIALFNLGRNEEAISSYDQALKFQPDFHEA 396

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           W +     ++L  +E+A+    Q L     F +A++ RG+ L  L ++++AI      L 
Sbjct: 397 WYNRGNALRNLGRNEEAISSYDQALKFQPDFHEAWNNRGVALFNLERNEEAISSYDQALK 456

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             P   +  Y +A CY       +AI++   A++L
Sbjct: 457 FQPDLHQAWYNKACCYALQNNVEKAIENLQIAINL 491



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 8/272 (2%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +E EAAIS + +A++  P   EAW  RG A   LG + EAI    ++++F P+     + 
Sbjct: 238 KEFEAAISSYDQALKFKPDKHEAWYNRGIALRNLGRNEEAISSYDQSVKFNPDDHQAWNN 297

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG   F       A+      VK+  +    +   G+AL ++G  ++A  ++ +A++   
Sbjct: 298 RGNTLFNLGRNEEAISSYDQAVKIKPDKHETWNNRGIALRNLGRNEEAISSYDQALKFQP 357

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           +  +AW +      +L  +E+A+    Q L     F +A++ RG  L  LG++++AI   
Sbjct: 358 DLHQAWNNRGIALFNLGRNEEAISSYDQALKFQPDFHEAWYNRGNALRNLGRNEEAISSY 417

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ--CLAF--- 663
              L   P   E    R      +    EAI  YD AL  + D  + +  +  C A    
Sbjct: 418 DQALKFQPDFHEAWNNRGVALFNLERNEEAISSYDQALKFQPDLHQAWYNKACCYALQNN 477

Query: 664 YQKEIA-LYTASKINSEFC--WFDIDGDIDPL 692
            +K I  L  A  +N E C  W   D D D +
Sbjct: 478 VEKAIENLQIAINLNPEQCRTWAKTDSDFDSI 509



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 84/191 (43%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G+   AIS +DQ LK  P   +A   RG A       E AIS + +A++  
Sbjct: 331 NRGIALRNLGRNEEAISSYDQALKFQPDLHQAWNNRGIALFNLGRNEEAISSYDQALKFQ 390

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG + EAI    +AL+F+P+  +  + RG+  F  +    A+  
Sbjct: 391 PDFHEAWYNRGNALRNLGRNEEAISSYDQALKFQPDFHEAWNNRGVALFNLERNEEAISS 450

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K   +   A+       +     +KA E    AI L+      W      +  + 
Sbjct: 451 YDQALKFQPDLHQAWYNKACCYALQNNVEKAIENLQIAINLNPEQCRTWAKTDSDFDSIR 510

Query: 566 NSEKALECLQQ 576
           N E   E +++
Sbjct: 511 NDELFQELMEK 521



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 8/238 (3%)

Query: 464 ESVEAIQDL-SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           E V   QDL ++  + E     +L E G + +  K+F AA+      +K   +   A+  
Sbjct: 204 EKVLEFQDLLAEQHQTEDRKVGLLFELGNLLYAAKEFEAAISSYDQALKFKPDKHEAWYN 263

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            G+AL ++G  ++A  ++ ++++ + +  +AW +      +L  +E+A+    Q + I  
Sbjct: 264 RGIALRNLGRNEEAISSYDQSVKFNPDDHQAWNNRGNTLFNLGRNEEAISSYDQAVKIKP 323

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
              + ++ RG+ L  LG++++AI      L   P   +    R      +G   EAI  Y
Sbjct: 324 DKHETWNNRGIALRNLGRNEEAISSYDQALKFQPDLHQAWNNRGIALFNLGRNEEAISSY 383

Query: 643 DAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           D AL  + D  E       A+Y +  AL    +       +D      P F E W  R
Sbjct: 384 DQALKFQPDFHE-------AWYNRGNALRNLGRNEEAISSYDQALKFQPDFHEAWNNR 434


>gi|168705001|ref|ZP_02737278.1| TPR repeat [Gemmata obscuriglobus UQM 2246]
          Length = 518

 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 131/281 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG A    G++A A++ F Q ++  P Y EA   R TA     +L+AA++D+T A++ 
Sbjct: 47  FHRGNAYAAAGRHAEAVADFTQAVELRPDYAEAYHNRATAHVDAGDLDAALADYTRAVEL 106

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P   +A   R    +       A  D   A +  P++  +   R   +        AV 
Sbjct: 107 DPEDPDAINGRAAVYSRQKNFDAAFADYETAAKLAPDTFRVFFNRANAHSSLNKHEDAVT 166

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +A +++   +  AY Y  ++L ++    +A      A++L     EA+    + Y   
Sbjct: 167 DYTAALRISPRSARAYLYRAMSLEALDRTAEALTDLSTALRLQPTSAEAFWQRARVYAAC 226

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              EKA+     +L +D + + A +LRG+    LG+H KA+ D +  + IDP+++   + 
Sbjct: 227 DEHEKAVADFTWLLKLDPKHADALNLRGVSHAELGEHAKAVADFTRAIAIDPNDVAPWFN 286

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           R   +    + + AI D+  +++L  D    +V +  AF++
Sbjct: 287 RGLSHTRTRDTQAAIDDFTKSIELAPDDPAAYVQRGYAFHE 327



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 168/403 (41%), Gaps = 41/403 (10%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L+ R  A   + E   A+  F+ AI   P+  E +  RG A AA G   EA+ D ++A+E
Sbjct: 12  LVRRAHAYTRRAEYPKALEAFSAAIDLEPADAELYFHRGNAYAAAGRHAEAVADFTQAVE 71

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
             P+ A+  H R   +    D +AA+ D +  V+LD E+  A        S    +  A 
Sbjct: 72  LRPDYAEAYHNRATAHVDAGDLDAALADYTRAVELDPEDPDAINGRAAVYSRQKNFDAAF 131

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
             +  A +L  +    + +    +  L   E A+      L I  R ++AY  R + L  
Sbjct: 132 ADYETAAKLAPDTFRVFFNRANAHSSLNKHEDAVTDYTAALRISPRSARAYLYRAMSLEA 191

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           L +  +A+ DLS+ L + P++ E  + RA  Y A  E+ +A+ D+   L L+    +   
Sbjct: 192 LDRTAEALTDLSTALRLQPTSAEAFWQRARVYAACDEHEKAVADFTWLLKLDPKHADALN 251

Query: 658 LQC-----LAFYQKEIALYT---ASKINSEFCWF----------DIDGDIDPLFKEYWCK 699
           L+      L  + K +A +T   A   N    WF          D    ID   K     
Sbjct: 252 LRGVSHAELGEHAKAVADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSI--- 308

Query: 700 RLHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADSIGKKIQYDCPGF-- 757
            L P +    V R           +LR  D +V     A+ L  DS G+      P F  
Sbjct: 309 ELAPDDPAAYVQR------GYAFHELREADRAVADFTRAIDLRPDS-GR------PYFGR 355

Query: 758 -LSNRRQHRMAGLAAIEIAQKVSKIWRSLQAEWKYSNRSSSKN 799
            L+NRR+    G     +A   + I R+ Q++  Y+ R+S ++
Sbjct: 356 ALANRRK----GDLHAAVADASAVIERNPQSDSAYNLRASLRH 394



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 134/309 (43%), Gaps = 34/309 (11%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA----------- 434
           +R  A V+ G   +A++ + + ++ DP  P+A+ GR    + Q+  +AA           
Sbjct: 82  NRATAHVDAGDLDAALADYTRAVELDPEDPDAINGRAAVYSRQKNFDAAFADYETAAKLA 141

Query: 435 -----------------------ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
                                  ++D+T A++ +P +  A+  R  +  AL  + EA+ D
Sbjct: 142 PDTFRVFFNRANAHSSLNKHEDAVTDYTAALRISPRSARAYLYRAMSLEALDRTAEALTD 201

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
           LS AL  +P SA+   +R  V     +   AV D +  +KLD ++  A    G++ + +G
Sbjct: 202 LSTALRLQPTSAEAFWQRARVYAACDEHEKAVADFTWLLKLDPKHADALNLRGVSHAELG 261

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           E+ KA     +AI +D N +  W +    +    +++ A++   + + +      AY  R
Sbjct: 262 EHAKAVADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAPDDPAAYVQR 321

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G   H L +  +A+ D +  + + P +    + RA      G+   A+ D  A ++    
Sbjct: 322 GYAFHELREADRAVADFTRAIDLRPDSGRPYFGRALANRRKGDLHAAVADASAVIERNPQ 381

Query: 652 SMEKFVLQC 660
           S   + L+ 
Sbjct: 382 SDSAYNLRA 390



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 14/242 (5%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           + A A++     L+  P   EA   R    A   E E A++DFT  ++ +P   +A   R
Sbjct: 194 RTAEALTDLSTALRLQPTSAEAFWQRARVYAACDEHEKAVADFTWLLKLDPKHADALNLR 253

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G + A LGE  +A+ D ++A+  +PN       RG+ + + +D  AA++D +  ++L  +
Sbjct: 254 GVSHAELGEHAKAVADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAPD 313

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK-----A 570
           + +AY   G A   + E  +A     +AI L  +    +     F + LAN  K     A
Sbjct: 314 DPAAYVQRGYAFHELREADRAVADFTRAIDLRPDSGRPY-----FGRALANRRKGDLHAA 368

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL----YLRA 626
           +     V+  + +   AY+LR  L H +G    A++D      IDP +   L    ++RA
Sbjct: 369 VADASAVIERNPQSDSAYNLRASLRHQIGDLVGALEDHQKAFEIDPDDAATLNHLAWIRA 428

Query: 627 SC 628
           +C
Sbjct: 429 TC 430



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 87/171 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG++    G++A A++ F + +  DP        RG +    R+ +AAI DFT++I+  P
Sbjct: 253 RGVSHAELGEHAKAVADFTRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAP 312

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+ +RG A   L E+  A+ D ++A++  P+S      R + N +  D +AAV D 
Sbjct: 313 DDPAAYVQRGYAFHELREADRAVADFTRAIDLRPDSGRPYFGRALANRRKGDLHAAVADA 372

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           SA ++ + ++ SAY         IG+   A E H KA ++D +      HL
Sbjct: 373 SAVIERNPQSDSAYNLRASLRHQIGDLVGALEDHQKAFEIDPDDAATLNHL 423



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 5/154 (3%)

Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +++I++D        +RG++        +AI  F + ++  P  P A + RG A    RE
Sbjct: 271 TRAIAIDPNDVAPWFNRGLSHTRTRDTQAAIDDFTKSIELAPDDPAAYVQRGYAFHELRE 330

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + A++DFT AI   P +G  +  R  A    G+   A+ D S  +E  P S    + R 
Sbjct: 331 ADRAVADFTRAIDLRPDSGRPYFGRALANRRKGDLHAAVADASAVIERNPQSDSAYNLRA 390

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
            +  +  D   A+ED     ++D ++ +   +L 
Sbjct: 391 SLRHQIGDLVGALEDHQKAFEIDPDDAATLNHLA 424



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/185 (18%), Positives = 81/185 (43%)

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           +P+    L  R     +  ++  A+E  SA + L+  +   Y + G A ++ G + +A  
Sbjct: 5   QPSELSNLVRRAHAYTRRAEYPKALEAFSAAIDLEPADAELYFHRGNAYAAAGRHAEAVA 64

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
              +A++L  ++ EA+ +    + D  + + AL    + + +D     A + R  +    
Sbjct: 65  DFTQAVELRPDYAEAYHNRATAHVDAGDLDAALADYTRAVELDPEDPDAINGRAAVYSRQ 124

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
                A  D  +   + P      + RA+ + ++ ++ +A+ DY AAL +   S   ++ 
Sbjct: 125 KNFDAAFADYETAAKLAPDTFRVFFNRANAHSSLNKHEDAVTDYTAALRISPRSARAYLY 184

Query: 659 QCLAF 663
           + ++ 
Sbjct: 185 RAMSL 189


>gi|223939851|ref|ZP_03631720.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223891443|gb|EEF57935.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 442

 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 5/267 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A   +G    A+  +++ L+ +P Y EA   R  A   QR+   AISD+T A+Q  P
Sbjct: 111 RGRAYAAKGNLEQAMQDYNRALELNPKYAEAFFDRANAYFLQRKFNEAISDYTNAVQFEP 170

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               ++  RG+AR+A  +  +AI D S+A+      A  L  RG   +K   F+ A+ D 
Sbjct: 171 GNARSFYERGEARSAKADWEQAINDYSEAVRLNSREALYLGARGFACYKTGRFDQALSDY 230

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +++D  +  +Y    L  SS+G+  KA      AI+L+    + +G        L  
Sbjct: 231 DEAIRIDANHYKSYHGRALIFSSLGQLDKALMNFDVAIRLNATQAQLYGGRGAICLKLGM 290

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC----L 622
            ++ALE   Q++ +D + +  Y  R  +    G+ KKA+ D    + +DP +++      
Sbjct: 291 LDQALEDYHQLIKLDPKNAMGYMARAAVHARKGEFKKALDDSLESVWLDPISVKTHNSLA 350

Query: 623 YLRASC-YHAIGEYREAIKDYDAALDL 648
           +L A+C   +I   REA +    A DL
Sbjct: 351 WLLATCPLDSIRNGREAFEIAQKACDL 377



 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 124/256 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+    +G++  A+  + ++++ +P   +A   RG A A +  LE A+ D+  A++ N
Sbjct: 76  TRGLIYDKKGEFDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELN 135

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA+  R  A     +  EAI D + A++FEP +A   +ERG       D+  A+ D
Sbjct: 136 PKYAEAFFDRANAYFLQRKFNEAISDYTNAVQFEPGNARSFYERGEARSAKADWEQAIND 195

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  V+L+          G A    G + +A   + +AI++D N  +++      +  L 
Sbjct: 196 YSEAVRLNSREALYLGARGFACYKTGRFDQALSDYDEAIRIDANHYKSYHGRALIFSSLG 255

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             +KAL      + ++   ++ Y  RG +   LG   +A++D    + +DP N      R
Sbjct: 256 QLDKALMNFDVAIRLNATQAQLYGGRGAICLKLGMLDQALEDYHQLIKLDPKNAMGYMAR 315

Query: 626 ASCYHAIGEYREAIKD 641
           A+ +   GE+++A+ D
Sbjct: 316 AAVHARKGEFKKALDD 331



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 131/291 (45%), Gaps = 38/291 (13%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---------------------- 431
           +G Y  +IS ++  L+ +P Y EA   RG A A + EL                      
Sbjct: 18  DGNYDLSISRWNAALQLNPHYAEAYTYRGMAYAAKLELNQALEDLDTAISLGDSRAYSTR 77

Query: 432 ----------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
                     + A+ D+ E ++  P   +A++ RG+A AA G   +A+QD ++ALE  P 
Sbjct: 78  GLIYDKKGEFDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELNPK 137

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A+   +R    F  + FN A+ D +  V+ +  N  ++   G A S+  ++++A   + 
Sbjct: 138 YAEAFFDRANAYFLQRKFNEAISDYTNAVQFEPGNARSFYERGEARSAKADWEQAINDYS 197

Query: 542 KAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
           +A++L+     +L A G            ++AL    + + ID    K+YH R L+   L
Sbjct: 198 EAVRLNSREALYLGARGFACY---KTGRFDQALSDYDEAIRIDANHYKSYHGRALIFSSL 254

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           GQ  KA+ +    + ++ +  +    R +    +G   +A++DY   + L+
Sbjct: 255 GQLDKALMNFDVAIRLNATQAQLYGGRGAICLKLGMLDQALEDYHQLIKLD 305



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 116/233 (49%), Gaps = 8/233 (3%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           +IS +  A+Q NP   EA+  RG A AA  E  +A++DL  A+    + A     RG++ 
Sbjct: 24  SISRWNAALQLNPHYAEAYTYRGMAYAAKLELNQALEDLDTAISLGDSRA--YSTRGLIY 81

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            K  +F+ A++D    V+L+ +   AY + G A ++ G  ++A + + +A++L+  + EA
Sbjct: 82  DKKGEFDKALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELNPKYAEA 141

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           +      Y       +A+      +  +   +++++ RG         ++AI D S  + 
Sbjct: 142 FFDRANAYFLQRKFNEAISDYTNAVQFEPGNARSFYERGEARSAKADWEQAINDYSEAVR 201

Query: 614 IDPSNIECLYLRA---SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           ++    E LYL A   +CY   G + +A+ DYD A+ ++ +  + +  + L F
Sbjct: 202 LNSR--EALYLGARGFACYK-TGRFDQALSDYDEAIRIDANHYKSYHGRALIF 251



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 2/122 (1%)

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           A+QL+ ++ EA+ +    Y       +ALE L   + +    S+AY  RGL+    G+  
Sbjct: 31  ALQLNPHYAEAYTYRGMAYAAKLELNQALEDLDTAISLGD--SRAYSTRGLIYDKKGEFD 88

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           KA+ D    + ++P   +    R   Y A G   +A++DY+ AL+L     E F  +  A
Sbjct: 89  KALDDWKEVVRLEPKLAKAYRFRGRAYAAKGNLEQAMQDYNRALELNPKYAEAFFDRANA 148

Query: 663 FY 664
           ++
Sbjct: 149 YF 150



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 5/166 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G++  A+S +D+ ++ D  + ++  GR    +   +L+ A+ +F  AI+ N
Sbjct: 212 ARGFACYKTGRFDQALSDYDEAIRIDANHYKSYHGRALIFSSLGQLDKALMNFDVAIRLN 271

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  + +  RG     LG   +A++D  + ++ +P +A     R  V+ +  +F  A++D
Sbjct: 272 ATQAQLYGGRGAICLKLGMLDQALEDYHQLIKLDPKNAMGYMARAAVHARKGEFKKALDD 331

Query: 506 LSACVKLDK-----ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
               V LD       N  A+      L SI   ++A E   KA  L
Sbjct: 332 SLESVWLDPISVKTHNSLAWLLATCPLDSIRNGREAFEIAQKACDL 377


>gi|435852070|ref|YP_007313656.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
           DSM 15978]
 gi|433662700|gb|AGB50126.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
           DSM 15978]
          Length = 1078

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 158/354 (44%), Gaps = 7/354 (1%)

Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
           ETS   K++    V ++      SVD   ++GI+  N G Y  ++  FD+ L  DP   +
Sbjct: 621 ETSGSVKKSINNDVPQLDIFTVDSVDAWSAKGISYQNIGNYNESLVCFDKALMLDPTSVK 680

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
            L  +G+A         AI  +  AI  +P    AW   G    + G+S  A       L
Sbjct: 681 VLCDKGSALVEAGMDLWAIECYESAIAFDPGYSPAWYSLGVVSLSTGDSDRAQICFDNVL 740

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             EPN+   + ++G V F    ++ A++  +  + +D EN  A++  G A  ++ +Y  A
Sbjct: 741 ALEPNNTSAMLQKGRVLFSTGSYDQALQYANTVISIDPENSQAFSDRGDAYYALEKYPDA 800

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
             ++ +A++LDR  ++     +  Y+ L   ++A+    +++        A + +GL L 
Sbjct: 801 ASSYDQALELDRGNVDILYKQSVAYEKLGQFDRAIGSYDKIIAEQPDSKDAIYHKGLALD 860

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            +G++  A+      L +DPS+   +  +A  ++  G+Y++A+  +D  L ++  S+   
Sbjct: 861 RMGRYDDAVACYDQLLELDPSDTLVMGTKAFSFYLRGDYQQALAGFDQVLAIDPTSVS-- 918

Query: 657 VLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKV 710
                A Y K    Y  S       ++D   ++DP     W  +    N+  +V
Sbjct: 919 -----AMYHKGTISYLVSSYKGSIYYYDKTLELDPTCVTAWYNKGFIYNLIGQV 967



 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 146/336 (43%), Gaps = 11/336 (3%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            S G+  ++ G    A   FD +L  +P    A++ +G         + A+      I  +
Sbjct: 718  SLGVVSLSTGDSDRAQICFDNVLALEPNNTSAMLQKGRVLFSTGSYDQALQYANTVISID 777

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P   +A+  RG A  AL +  +A     +ALE +  + DIL+++ +   K   F+ A+  
Sbjct: 778  PENSQAFSDRGDAYYALEKYPDAASSYDQALELDRGNVDILYKQSVAYEKLGQFDRAIGS 837

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                +    ++K A  + GLAL  +G Y  A   + + ++LD +     G     +    
Sbjct: 838  YDKIIAEQPDSKDAIYHKGLALDRMGRYDDAVACYDQLLELDPSDTLVMGTKAFSFYLRG 897

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            + ++AL    QVL ID     A + +G + + +  +K +I      L +DP+ +   Y +
Sbjct: 898  DYQQALAGFDQVLAIDPTSVSAMYHKGTISYLVSSYKGSIYYYDKTLELDPTCVTAWYNK 957

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN-SEFC--- 681
               Y+ IG+   +I  YD+A  L +D   + VL     Y K  ALY+  K + +E C   
Sbjct: 958  GFIYNLIGQVETSISCYDSA--LAIDPSSRSVL-----YNKRFALYSIGKSSEAEICKET 1010

Query: 682  WFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLR 717
               ID   +P  K+   K   P    E +  Q P R
Sbjct: 1011 LESIDPGFEPSLKDRGTKFFVPSTYSESLDYQLPER 1046



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 135/321 (42%), Gaps = 39/321 (12%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G++  A+  +D IL     Y  ++   G +         +I+ F  A+   P   + W  
Sbjct: 180 GRHEEAMVCYDHILDLFSTYANSMYDTGYSYLQVGRYNDSIASFDVALTMLPDDPKMWFA 239

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R  A  A+GE   A+ D +  L+ EP +A+ L+ +        D  +++E  +  +  D 
Sbjct: 240 RAAAYEAIGEYENALADYNNILKLEPLNAEALYGKARAATNLGDHASSIEAYNLLLSEDP 299

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            N +A+     +  S+G+Y  A   + + + LD     AW    +    L    +A+EC 
Sbjct: 300 YNINAWLLQAQSYDSLGQYTDAINCYDQLLVLDPQNATAWNKKGRTLDSLGRYSEAIEC- 358

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN-IECL----------- 622
                         + R L L+  G    +I D+SS L ID  N +EC            
Sbjct: 359 --------------YDRALQLNSDGFSGVSITDMSSYLFIDEVNAMECYNKSPTFSTESA 404

Query: 623 ---YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYTAS 674
              Y + + ++ +G+Y +AI  YD   +LE +S   +  +  AF     Y   +  Y+ +
Sbjct: 405 HIWYDKGTAFYNLGKYEDAISSYDRVTELEPNSAIVWYNRAKAFDMLQKYDGAVDSYSKA 464

Query: 675 KINSEFC---WFDIDGDIDPL 692
            +N+E C   WF+   D+D L
Sbjct: 465 -LNAESCARVWFERGMDLDKL 484



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/351 (20%), Positives = 135/351 (38%), Gaps = 72/351 (20%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG+     G +A AI  +D+ LKEDP +  AL  + +          A++ + + ++ 
Sbjct: 475 FERGMDLDKLGLFADAIKSYDKALKEDPGFSAALYAKASNLEKVERYTEALTAYNKLLEL 534

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD----ILHERGIVN------- 493
           +  + + W R+G     LG+  EAI    + L  +P   +    I+ +  ++N       
Sbjct: 535 HSESADIWYRKGMVLDKLGKYEEAIVAYEQTLALDPGYQEANLRIMIDTNLINADDTAES 594

Query: 494 ---------FKFKDFNAAV------EDLSACVKLDKENK------------SAYTYLGLA 526
                      F+ F   V       + S  VK    N              A++  G++
Sbjct: 595 MKMVQTDKATMFQIFKGIVPTPLSNNETSGSVKKSINNDVPQLDIFTVDSVDAWSAKGIS 654

Query: 527 LSSIGEYKKAEEAHLKAIQLDRN----------------------------------FLE 552
             +IG Y ++     KA+ LD                                    +  
Sbjct: 655 YQNIGNYNESLVCFDKALMLDPTSVKVLCDKGSALVEAGMDLWAIECYESAIAFDPGYSP 714

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           AW  L        +S++A  C   VL ++   + A   +G +L   G + +A++  ++ +
Sbjct: 715 AWYSLGVVSLSTGDSDRAQICFDNVLALEPNNTSAMLQKGRVLFSTGSYDQALQYANTVI 774

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            IDP N +    R   Y+A+ +Y +A   YD AL+L+  +++    Q +A+
Sbjct: 775 SIDPENSQAFSDRGDAYYALEKYPDAASSYDQALELDRGNVDILYKQSVAY 825



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 132/277 (47%), Gaps = 15/277 (5%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ--RELEAAISDFTEAIQS 444
           +G A  N GKY  AIS +D++ + +P    A++    A+AF   ++ + A+  +++A+ +
Sbjct: 410 KGTAFYNLGKYEDAISSYDRVTELEP--NSAIVWYNRAKAFDMLQKYDGAVDSYSKALNA 467

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             S    W  RG     LG   +AI+   KAL+ +P  +  L+ +     K + +  A+ 
Sbjct: 468 E-SCARVWFERGMDLDKLGLFADAIKSYDKALKEDPGFSAALYAKASNLEKVERYTEALT 526

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
             +  ++L  E+   +   G+ L  +G+Y++A  A+ + + LD  + EA   +     +L
Sbjct: 527 AYNKLLELHSESADIWYRKGMVLDKLGKYEEAIVAYEQTLALDPGYQEANLRI-MIDTNL 585

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL------GQHKKAIKDLSSGLGI-DPS 617
            N++   E ++ V   DK  +     +G++   L      G  KK+I +    L I    
Sbjct: 586 INADDTAESMKMVQ-TDKA-TMFQIFKGIVPTPLSNNETSGSVKKSINNDVPQLDIFTVD 643

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           +++    +   Y  IG Y E++  +D AL L+  S++
Sbjct: 644 SVDAWSAKGISYQNIGNYNESLVCFDKALMLDPTSVK 680



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/263 (20%), Positives = 106/263 (40%), Gaps = 35/263 (13%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+       Y  A+  F+Q L+ DP   E L  +   +    + ++A++ + +AI +  
Sbjct: 37  QGLEMSRNASYTEALEFFEQALEIDPQSIEILENKAETQYLMGDPQSALNSY-DAILNKS 95

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           ++ E   ++G     LG   E++                ++E  +  F  + +N +    
Sbjct: 96  NSSEFLYKKGVMLENLGRYQESLN---------------IYEASLKKFDAQYYNQS---- 136

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S    +   N S  T+L                 L  +  D  +++   H  +    L  
Sbjct: 137 SDQSNVSSSNSSNATFL---------------TDLNGMAFDSEYIQLVYHKGRSLDGLGR 181

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+ C   +L +   ++ + +  G     +G++  +I      L + P + +  + RA
Sbjct: 182 HEEAMVCYDHILDLFSTYANSMYDTGYSYLQVGRYNDSIASFDVALTMLPDDPKMWFARA 241

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
           + Y AIGEY  A+ DY+  L LE
Sbjct: 242 AAYEAIGEYENALADYNNILKLE 264


>gi|15678111|ref|NP_275226.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621120|gb|AAB84589.1| O-linked GlcNAc transferase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 379

 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 133/280 (47%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  +I K+     +   ++G+     G+Y  A+  +++ LK +P Y  A   +       
Sbjct: 72  CYEKILKNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKEL 131

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              + A+  + +A+Q NP   +AW  +G     L +  +A++   KA+E  P +      
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +GI     K +  A++     ++L+ ++  A+   GL  + +G Y ++ E + KA+Q++ 
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              EAW +      +L   E+ALEC ++ L ID    K ++ +GL+L  LG++K A++  
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECF 311

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              L I+P   +    +      + +  E++K Y  AL L
Sbjct: 312 QKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKL 351



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 151/304 (49%), Gaps = 6/304 (1%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + L+ G + + +GKY  A+  F + LK  P  PE L          +  E A+  + + +
Sbjct: 18  WHLAGGRSSLKQGKYKEALKEFRKALKARPNNPEILHYNAITLLKLKRPEKALECYEKIL 77

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           ++NP   EAW  +G     LG   EA++   KAL+  P  A   + + +V  +   ++ A
Sbjct: 78  KNNPKLAEAWNNKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEA 137

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +E     ++++ +   A+   G  L  + +YKKA +   KAI+L+     AWG       
Sbjct: 138 LECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGTKGITLH 197

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +L   E+AL+C  +VL ++ +  KA++ +GL+ + LG++ ++++     L I+P   E  
Sbjct: 198 NLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINPKLAEAW 257

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIALYT-ASKI 676
             +      +G Y EA++ Y+ AL+++ +     + +  VL+ L  Y+  +  +  A +I
Sbjct: 258 NNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECFQKALEI 317

Query: 677 NSEF 680
           N EF
Sbjct: 318 NPEF 321



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 115/223 (51%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A+  +++ L+ +P   +A   +G+   + ++ + A+  F +AI+ NP    AW  
Sbjct: 132 GRYDEALECYEKALQINPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRAWGT 191

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G     L    EA++   K L+  P      + +G+V  +   ++ ++E     ++++ 
Sbjct: 192 KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNELGRYDESLECYEKALQINP 251

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+   G+ LS +G Y++A E + KA+++D    + W +     ++L   + ALEC 
Sbjct: 252 KLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECF 311

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
           Q+ L I+  F+ A+  +G++L  L + ++++K     L ++P 
Sbjct: 312 QKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLNPP 354



 Score = 43.1 bits (100), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 34/58 (58%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           N+   +++L  +   +   +KALQ++P L +A+  KG   S LGR EEAL  +EK  E
Sbjct: 225 NKGLVFNELGRYDESLECYEKALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALE 282



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 6/119 (5%)

Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K++ ++ +L+     +G+     G+Y  A+  +++ L+ DP   +    +G       + 
Sbjct: 245 KALQINPKLAEAWNNKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKY 304

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD-ILHER 489
           + A+  F +A++ NP   +AWK +G     L +  E+++   KAL+  P   + ++H R
Sbjct: 305 KDALECFQKALEINPEFADAWKWKGIILEDLKKPEESLKCYKKALKLNPPKQNTMVHAR 363


>gi|427710394|ref|YP_007052771.1| hypothetical protein Nos7107_5106 [Nostoc sp. PCC 7107]
 gi|427362899|gb|AFY45621.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 226

 Score =  103 bits (257), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 98/165 (59%), Gaps = 2/165 (1%)

Query: 374 SKSKSISVDFR--LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           +K+ S  ++F+    +G+ ++ +G +++A++ FD++++++P + E    RG A++   +L
Sbjct: 30  AKTPSSQINFQEYFQQGVQKLEQGNFSAAVTDFDKVVQQNPKFYEGFCLRGLAKSQLGDL 89

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           +AAI DF +A+Q NP   +A+  RG   A LG   +AI D +  L+ +P S D  + RG+
Sbjct: 90  QAAIDDFNQALQLNPQHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGL 149

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             FK ++  AA+ D +  + L+ +   AY   GLA  ++G+ + A
Sbjct: 150 AYFKQQNPQAAISDFNQAISLNPQLADAYGNRGLAKYTLGDQRNA 194



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 34/194 (17%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G  +  Q    AA++DF + +Q NP   E +  RG A++ LG+   AI D ++AL+  P
Sbjct: 45  QGVQKLEQGNFSAAVTDFDKVVQQNPKFYEGFCLRGLAKSQLGDLQAAIDDFNQALQLNP 104

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
              D  + RG V  +  +   A+ D +A +K+D ++  AY   GLA              
Sbjct: 105 QHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGLA-------------- 150

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
                               Y    N + A+    Q + ++ + + AY  RGL  + LG 
Sbjct: 151 --------------------YFKQQNPQAAISDFNQAISLNPQLADAYGNRGLAKYTLGD 190

Query: 601 HKKAIKDLSSGLGI 614
            + AI DL     I
Sbjct: 191 QRNAIADLQQAAAI 204



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 65/136 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+   G   +AI  F+Q L+ +P + +A   RGT  A    L+ AI+DF   ++ +P
Sbjct: 79  RGLAKSQLGDLQAAIDDFNQALQLNPQHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDP 138

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            + +A+  RG A         AI D ++A+   P  AD    RG+  +   D   A+ DL
Sbjct: 139 QSVDAYYNRGLAYFKQQNPQAAISDFNQAISLNPQLADAYGNRGLAKYTLGDQRNAIADL 198

Query: 507 SACVKLDKENKSAYTY 522
                + ++     +Y
Sbjct: 199 QQAAAIFRQQGDTASY 214



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 50/95 (52%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D   SRG      G    AI+ F+  LK DP   +A   RG A   Q+  +AAISDF +
Sbjct: 107 IDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGLAYFKQQNPQAAISDFNQ 166

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           AI  NP   +A+  RG A+  LG+   AI DL +A
Sbjct: 167 AISLNPQLADAYGNRGLAKYTLGDQRNAIADLQQA 201



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 74/158 (46%)

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           ++G+   +  +F+AAV D    V+ + +    +   GLA S +G+ + A +   +A+QL+
Sbjct: 44  QQGVQKLEQGNFSAAVTDFDKVVQQNPKFYEGFCLRGLAKSQLGDLQAAIDDFNQALQLN 103

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
              ++A+      Y  L N +KA+      L ID +   AY+ RGL        + AI D
Sbjct: 104 PQHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGLAYFKQQNPQAAISD 163

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            +  + ++P   +    R    + +G+ R AI D   A
Sbjct: 164 FNQAISLNPQLADAYGNRGLAKYTLGDQRNAIADLQQA 201



 Score = 50.4 bits (119), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 65/149 (43%)

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           N   Y   G+     G +  A     K +Q +  F E +         L + + A++   
Sbjct: 38  NFQEYFQQGVQKLEQGNFSAAVTDFDKVVQQNPKFYEGFCLRGLAKSQLGDLQAAIDDFN 97

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           Q L ++ +   AY+ RG +   LG  +KAI D ++ L IDP +++  Y R   Y      
Sbjct: 98  QALQLNPQHIDAYNSRGTVYAQLGNLQKAIADFNATLKIDPQSVDAYYNRGLAYFKQQNP 157

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFY 664
           + AI D++ A+ L     + +  + LA Y
Sbjct: 158 QAAISDFNQAISLNPQLADAYGNRGLAKY 186


>gi|398019700|ref|XP_003863014.1| hypothetical protein, conserved [Leishmania donovani]
 gi|322501245|emb|CBZ36324.1| hypothetical protein, conserved [Leishmania donovani]
          Length = 847

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 138/320 (43%), Gaps = 16/320 (5%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           ++  +   RG+     G+  +AI ++ + L+  P + +AL  R       +    AI D+
Sbjct: 407 LNAHYFYQRGLEHRRRGELEAAIHMYTRALELSPTHFKALFNRAFCEDKLKNYTRAIEDY 466

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
           T A+  +P         G +    G    A+Q  ++A+E +    D  H RG    K   
Sbjct: 467 TAALDLDPRNPFTHYNLGISYDHKGRHARAMQAFTRAIELDDRHPDFFHNRGFTQRKQGA 526

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           + AA+ D +  + LD ++  ++       S +G Y++A   +  A+Q+D     A+ +  
Sbjct: 527 YAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRG 586

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                L   E A+E     L +  + + A + RGL+   L Q+ KA+ D +  + +D  N
Sbjct: 587 AALAKLGRLEAAVENFNCALRLSPKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRN 646

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT- 672
              L+ R   Y  +GE   AI DY A++ L   S   +  +  AF     Y+  I  YT 
Sbjct: 647 PVWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYEAAIEDYTR 706

Query: 673 --------ASKI--NSEFCW 682
                   A+K+  N  +C+
Sbjct: 707 ALREHPGVATKVLNNRAYCF 726



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 115/301 (38%), Gaps = 67/301 (22%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF  +RG  Q  +G YA+AI+ +   +  DP + ++   R    +     E A++D+  A
Sbjct: 512 DFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAA 571

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +Q +     A+  RG A A LG    A+++ + AL   P     L+ RG+V  + + ++ 
Sbjct: 572 LQIDSGNANAYHNRGAALAKLGRLEAAVENFNCALRLSPKLTFALNARGLVYDQLQQYDK 631

Query: 502 A----------------------------------VEDLSACVKLDKENKSAYTYLGLAL 527
           A                                  + D SA +KL   + +AYT    A 
Sbjct: 632 ALADFTEAIRLDQRNPVWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAF 691

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             +G Y+ A E + +A++      E  G  T+   +                        
Sbjct: 692 RKLGRYEAAIEDYTRALR------EHPGVATKVLNN------------------------ 721

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
              R      L   + A++D +  L  DP N   LY R   +   G+Y  A+ D+  A+ 
Sbjct: 722 ---RAYCFARLNLFEDAVRDYTEVLATDPVNAHALYNRGISFEKCGKYNAAVDDFTRAIR 778

Query: 648 L 648
           L
Sbjct: 779 L 779



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 117/307 (38%), Gaps = 59/307 (19%)

Query: 365 NKKFCVTRISKSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQILKED 411
           N+ +C +++ + +    D+  +             RG A    G+  +A+  F+  L+  
Sbjct: 550 NRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGRLEAAVENFNCALRLS 609

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAI---QSNPSAGEAW-KRRGQARAALGESVE 467
           P    AL  RG      ++ + A++DFTEAI   Q NP     W   RG     +GE   
Sbjct: 610 PKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRNP----VWLHNRGYTYRNMGELEL 665

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AI D S +++  P+S      R     K   + AA+ED                      
Sbjct: 666 AIADYSASIKLAPHSHTAYTNRAFAFRKLGRYEAAIED---------------------- 703

Query: 528 SSIGEYKKAEEAHLK-AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
                Y +A   H   A ++  N    +  L  F       E A+    +VL  D   + 
Sbjct: 704 -----YTRALREHPGVATKVLNNRAYCFARLNLF-------EDAVRDYTEVLATDPVNAH 751

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGID---PSNIECLYLRASCYHAIGEYREAIKDYD 643
           A + RG+     G++  A+ D +  + +    PS     Y R +    + +  +A +D  
Sbjct: 752 ALYNRGISFEKCGKYNAAVDDFTRAIRLAPEVPSTACSYYSRGTSRLQLHQVPQAAEDLK 811

Query: 644 AALDLEL 650
            AL L+L
Sbjct: 812 QALKLDL 818



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 15/110 (13%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE--------------DPMYPEALIGRGTARAFQR 429
           RL R  A V    YASA +  D  ++E              D +  EAL  RG  RA   
Sbjct: 49  RLLRAKAYVQLHDYASACADLDDWIQEIDRTAHGISAGAAADSL-TEALFYRGVCRARLS 107

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           +++ A++DFTE +Q  P    A   R    A L +   AI D   AL+ +
Sbjct: 108 QVKDAVADFTEVLQRKPGHRRAHYERAACHAQLDDFFNAIADYEAALQLD 157



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 37/72 (51%)

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            ++A   RG+    L Q K A+ D +  L   P +    Y RA+C+  + ++  AI DY+
Sbjct: 92  LTEALFYRGVCRARLSQVKDAVADFTEVLQRKPGHRRAHYERAACHAQLDDFFNAIADYE 151

Query: 644 AALDLELDSMEK 655
           AAL L+    EK
Sbjct: 152 AALQLDEVGREK 163



 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           NRA+C+S+L  ++  + D   ALQ+D     AY  +G A + LGR E A+
Sbjct: 550 NRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGRLEAAV 599


>gi|124023008|ref|YP_001017315.1| hypothetical protein P9303_13031 [Prochlorococcus marinus str. MIT
           9303]
 gi|123963294|gb|ABM78050.1| TPR repeat [Prochlorococcus marinus str. MIT 9303]
          Length = 306

 Score =  103 bits (257), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 72/278 (25%), Positives = 132/278 (47%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S  F    G A+V    Y  AI+ + + +  +P   +A   RG A++   + + AI+DF 
Sbjct: 17  SAVFYKKSGNAKVRSEDYQGAIADYSKAIAINPKDADAYNNRGLAKSKSGDNQGAIADFN 76

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI+ NP    A+  RG A++ LG+   AI D ++A+E  P        RG+       +
Sbjct: 77  KAIEINPQDARAYNNRGLAKSKLGDYQGAIADYNRAIEINPVYLYGFLNRGLAKKNLNKY 136

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ D +  + ++ +  +AY   GLA   + +Y+ A   + KAI ++     A+ +   
Sbjct: 137 QEAIADYNNAIAINPQLAAAYNKRGLAKVDLKDYQGAIADYNKAIAINPKDAAAYNNRGA 196

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
                 +++ A+    + + ID +++ AY  RGL  + LG ++ AI D S  + IDP ++
Sbjct: 197 VKGKSGDNQGAVADFNKAIEIDLQYADAYINRGLTQYNLGDNQGAIADYSEAIQIDPQDV 256

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                R      + +Y+ A  D+  A  L   S  +++
Sbjct: 257 FAYNNRGYATWKLKDYQSACNDFKKAASLGSQSTAQWL 294



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 60/273 (21%), Positives = 121/273 (44%), Gaps = 14/273 (5%)

Query: 295 ERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDM 354
           ++ G     + D    ++  S ++  +  ++++Y+   ++ +KS D+  + +  + K   
Sbjct: 22  KKSGNAKVRSEDYQGAIADYSKAIAINPKDADAYNNRGLAKSKSGDNQGAIADFN-KAIE 80

Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAI 401
           +      A  N+    +++   +    D+              L+RG+A+ N  KY  AI
Sbjct: 81  INPQDARAYNNRGLAKSKLGDYQGAIADYNRAIEINPVYLYGFLNRGLAKKNLNKYQEAI 140

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           + ++  +  +P    A   RG A+   ++ + AI+D+ +AI  NP    A+  RG  +  
Sbjct: 141 ADYNNAIAINPQLAAAYNKRGLAKVDLKDYQGAIADYNKAIAINPKDAAAYNNRGAVKGK 200

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
            G++  A+ D +KA+E +   AD    RG+  +   D   A+ D S  +++D ++  AY 
Sbjct: 201 SGDNQGAVADFNKAIEIDLQYADAYINRGLTQYNLGDNQGAIADYSEAIQIDPQDVFAYN 260

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             G A   + +Y+ A     KA  L       W
Sbjct: 261 NRGYATWKLKDYQSACNDFKKAASLGSQSTAQW 293



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 52/213 (24%), Positives = 108/213 (50%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +K+ G A+    +   AI D SKA+   P  AD  + RG+   K  D   A+ D +  ++
Sbjct: 21  YKKSGNAKVRSEDYQGAIADYSKAIAINPKDADAYNNRGLAKSKSGDNQGAIADFNKAIE 80

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           ++ ++  AY   GLA S +G+Y+ A   + +AI+++  +L  + +     ++L   ++A+
Sbjct: 81  INPQDARAYNNRGLAKSKLGDYQGAIADYNRAIEINPVYLYGFLNRGLAKKNLNKYQEAI 140

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
                 + I+ + + AY+ RGL    L  ++ AI D +  + I+P +      R +    
Sbjct: 141 ADYNNAIAINPQLAAAYNKRGLAKVDLKDYQGAIADYNKAIAINPKDAAAYNNRGAVKGK 200

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            G+ + A+ D++ A++++L   + ++ + L  Y
Sbjct: 201 SGDNQGAVADFNKAIEIDLQYADAYINRGLTQY 233


>gi|146094076|ref|XP_001467149.1| conserved hypothetical protein [Leishmania infantum JPCM5]
 gi|134071513|emb|CAM70202.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 847

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 138/320 (43%), Gaps = 16/320 (5%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           ++  +   RG+     G+  +AI ++ + L+  P + +AL  R       +    AI D+
Sbjct: 407 LNAHYFYQRGLEHRRRGELEAAIHMYTRALELSPTHFKALFNRAFCEDKLKNYTRAIEDY 466

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
           T A+  +P         G +    G    A+Q  ++A+E +    D  H RG    K   
Sbjct: 467 TAALDLDPRNPFTHYNLGISYDHKGRHARAMQAFTRAIELDDRHPDFFHNRGFTQRKQGA 526

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           + AA+ D +  + LD ++  ++       S +G Y++A   +  A+Q+D     A+ +  
Sbjct: 527 YAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRG 586

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                L   E A+E     L +  + + A + RGL+   L Q+ KA+ D +  + +D  N
Sbjct: 587 AALAKLGRLEAAVENFNCALRLSPKLTFALNARGLVYDQLQQYDKALADFTEAIRLDQRN 646

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT- 672
              L+ R   Y  +GE   AI DY A++ L   S   +  +  AF     Y+  I  YT 
Sbjct: 647 PVWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAFRKLGRYEAAIEDYTR 706

Query: 673 --------ASKI--NSEFCW 682
                   A+K+  N  +C+
Sbjct: 707 ALREHPGVATKVLNNRAYCF 726



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 73/313 (23%), Positives = 127/313 (40%), Gaps = 50/313 (15%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF  +RG  Q  +G YA+AI+ +   +  DP + ++   R    +     E A++D+  A
Sbjct: 512 DFFHNRGFTQRKQGAYAAAIADYTTAISLDPKHFKSHYNRAYCFSKLGRYEEAVADYAAA 571

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +Q +     A+  RG A A LG    A+++ + AL   P     L+ RG+V  + + ++ 
Sbjct: 572 LQIDSGNANAYHNRGAALAKLGRLEAAVENFNCALRLSPKLTFALNARGLVYDQLQQYDK 631

Query: 502 A----------------------------------VEDLSACVKLDKENKSAYTYLGLAL 527
           A                                  + D SA +KL   + +AYT    A 
Sbjct: 632 ALADFTEAIRLDQRNPVWLHNRGYTYRNMGELELAIADYSASIKLAPHSHTAYTNRAFAF 691

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS-------EKALECLQQVLYI 580
             +G Y+ A E + +A++      E  G  T+   + A         E A+    +VL  
Sbjct: 692 RKLGRYEAAIEDYTRALR------EHPGVATKVLNNRAYCFARLNLFEDAVRDYTEVLAT 745

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID---PSNIECLYLRASCYHAIGEYRE 637
           D   + A + RG+     G++  A  D +  + +    PS     Y R +    + +  +
Sbjct: 746 DPVNAHALYNRGISFEKCGKYNAAADDFTRAIRLAPEVPSTASSYYSRGTSRLQLHQVPQ 805

Query: 638 AIKDYDAALDLEL 650
           A +D   AL L+L
Sbjct: 806 AAEDLKQALKLDL 818



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 15/110 (13%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKE--------------DPMYPEALIGRGTARAFQR 429
           RL R  A V    YASA +  D  ++E              D +  EAL  RG  RA   
Sbjct: 49  RLLRAKAYVQLHDYASACADLDDWIQEIDRTAHGISAGAAADSL-TEALFYRGVCRARLS 107

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           +++ A++DFTE +Q  P    A   R    A L +   AI D   AL+ +
Sbjct: 108 QVKDAVADFTEVLQRKPGHRRAHYERAACHAQLDDFFNAIADYEAALQLD 157



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 37/72 (51%)

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            ++A   RG+    L Q K A+ D +  L   P +    Y RA+C+  + ++  AI DY+
Sbjct: 92  LTEALFYRGVCRARLSQVKDAVADFTEVLQRKPGHRRAHYERAACHAQLDDFFNAIADYE 151

Query: 644 AALDLELDSMEK 655
           AAL L+    EK
Sbjct: 152 AALQLDEVGREK 163



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           NRA+C+S+L  ++  + D   ALQ+D     AY  +G A + LGR E A+
Sbjct: 550 NRAYCFSKLGRYEEAVADYAAALQIDSGNANAYHNRGAALAKLGRLEAAV 599


>gi|254526134|ref|ZP_05138186.1| hypothetical protein P9202_786 [Prochlorococcus marinus str. MIT
           9202]
 gi|221537558|gb|EEE40011.1| hypothetical protein P9202_786 [Prochlorococcus marinus str. MIT
           9202]
          Length = 275

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 2/253 (0%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI   ++  K DP Y E L   G  +   +  + AI DFT+ I  NP   + +K RG
Sbjct: 11  YRGAIQDCEKAFKIDPKYEEVLYLSGVTKNCIKNYKGAIEDFTKLIAINPKTEDVFKNRG 70

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD-KE 515
            A+  LG+   AI+D + A+E  P        RG   +K  ++  A+EDL+  ++L+ K 
Sbjct: 71  IAKDELGDFKGAIEDYTSAIEINPEDHLNFFFRGNTKYKLNNYEDALEDLTKTIELNPKS 130

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           + + Y   G+    + + K A + +  AI+++  F  A+        DL +   A+E   
Sbjct: 131 SLALYDRAGIK-KILNDNKGAIQDYTSAIEINPTFANAYFKRGDLSSDLEDYASAIEDFS 189

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           +V+ ID  +   Y  RG   + L  +K AI D    +  +P + +  +   SC   +G+ 
Sbjct: 190 KVIVIDPNYQNIYFYRGNAKYNLDDNKSAIADYEIAIEKNPVHSDTYFNLGSCRENLGDL 249

Query: 636 REAIKDYDAALDL 648
           + AIK++  A +L
Sbjct: 250 KGAIKEWRKAAEL 262



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 78/160 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+   G +  AI  +   ++ +P        RG  +      E A+ D T+ I+ N
Sbjct: 68  NRGIAKDELGDFKGAIEDYTSAIEINPEDHLNFFFRGNTKYKLNNYEDALEDLTKTIELN 127

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +  A   R   +  L ++  AIQD + A+E  P  A+   +RG ++   +D+ +A+ED
Sbjct: 128 PKSSLALYDRAGIKKILNDNKGAIQDYTSAIEINPTFANAYFKRGDLSSDLEDYASAIED 187

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            S  + +D   ++ Y Y G A  ++ + K A   +  AI+
Sbjct: 188 FSKVIVIDPNYQNIYFYRGNAKYNLDDNKSAIADYEIAIE 227



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 74/160 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG  +     Y  A+    + ++ +P    AL  R   +    + + AI D+T AI+ NP
Sbjct: 103 RGNTKYKLNNYEDALEDLTKTIELNPKSSLALYDRAGIKKILNDNKGAIQDYTSAIEINP 162

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   A+ +RG   + L +   AI+D SK +  +PN  +I   RG   +   D  +A+ D 
Sbjct: 163 TFANAYFKRGDLSSDLEDYASAIEDFSKVIVIDPNYQNIYFYRGNAKYNLDDNKSAIADY 222

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
              ++ +  +   Y  LG    ++G+ K A +   KA +L
Sbjct: 223 EIAIEKNPVHSDTYFNLGSCRENLGDLKGAIKEWRKAAEL 262


>gi|186684446|ref|YP_001867642.1| hypothetical protein Npun_R4324 [Nostoc punctiforme PCC 73102]
 gi|186466898|gb|ACC82699.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 763

 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 137/304 (45%), Gaps = 5/304 (1%)

Query: 346 SKLSFKWDMLK-ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
           S LSF W+++  +   +A R    C+ +       S D   ++G A  N G+   AI+ +
Sbjct: 435 SLLSFSWNLINSKRYQDALR----CLNKALTFTPDSSDILFAKGNALFNLGRLEEAIASY 490

Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
           DQ L   P   +A   RG A      LE AI+ + +A+   P   +AW  RG A   LG 
Sbjct: 491 DQALNFKPDDHQAWYNRGIALFNLGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGR 550

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
             EAI    +AL F+P+  +  + RGI   +      A+      +    ++  A+   G
Sbjct: 551 LEEAIASYDQALNFKPDKDNAWNNRGIALVELGRLEEAIASYDQALNFKPDDHQAWYNRG 610

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           +AL ++G  ++A  +  +A+    ++ EAW +      +L   E+A+    Q + I    
Sbjct: 611 IALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVELGRLEEAIASFDQAIKIKSDD 670

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
            +A++  G  L  L + ++AI      L I P      Y +A CY  +G    AI++   
Sbjct: 671 HQAWNNWGYALVKLERLEEAIASFDEALKIKPDKDNAWYNKACCYGLLGNVDLAIENLQQ 730

Query: 645 ALDL 648
           +++L
Sbjct: 731 SINL 734



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 134/319 (42%), Gaps = 21/319 (6%)

Query: 308 HDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKK 367
           H ++ +   S + +  NS+ Y  +    NK+   T   S + F           AK N  
Sbjct: 429 HQEIKASLLSFSWNLINSKRYQDALRCLNKALTFTPDSSDILF-----------AKGNAL 477

Query: 368 FCVTRISK---SKSISVDFR-------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
           F + R+ +   S   +++F+        +RGIA  N G+   AI+ +DQ L   P   +A
Sbjct: 478 FNLGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASYDQALNFKPDDHQA 537

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
              RG A      LE AI+ + +A+   P    AW  RG A   LG   EAI    +AL 
Sbjct: 538 WYNRGIALFNLGRLEEAIASYDQALNFKPDKDNAWNNRGIALVELGRLEEAIASYDQALN 597

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
           F+P+     + RGI  F       A+      +    +   A+   G AL  +G  ++A 
Sbjct: 598 FKPDDHQAWYNRGIALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVELGRLEEAI 657

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
            +  +AI++  +  +AW +       L   E+A+    + L I      A++ +      
Sbjct: 658 ASFDQAIKIKSDDHQAWNNWGYALVKLERLEEAIASFDEALKIKPDKDNAWYNKACCYGL 717

Query: 598 LGQHKKAIKDLSSGLGIDP 616
           LG    AI++L   + ++P
Sbjct: 718 LGNVDLAIENLQQSINLNP 736



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 94/199 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G+   AI+ +DQ L   P    A   RG A      LE AI+ + +A+   
Sbjct: 540 NRGIALFNLGRLEEAIASYDQALNFKPDKDNAWNNRGIALVELGRLEEAIASYDQALNFK 599

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   LG   EAI    +AL F+P+  +  + RG    +      A+  
Sbjct: 600 PDDHQAWYNRGIALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVELGRLEEAIAS 659

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+  ++  A+   G AL  +   ++A  +  +A+++  +   AW +    Y  L 
Sbjct: 660 FDQAIKIKSDDHQAWNNWGYALVKLERLEEAIASFDEALKIKPDKDNAWYNKACCYGLLG 719

Query: 566 NSEKALECLQQVLYIDKRF 584
           N + A+E LQQ + ++ ++
Sbjct: 720 NVDLAIENLQQSINLNPKY 738



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 100/260 (38%), Gaps = 34/260 (13%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           +N  +Y  A+   ++ L   P   + L  +G A      LE AI+ + +A+   P   +A
Sbjct: 444 INSKRYQDALRCLNKALTFTPDSSDILFAKGNALFNLGRLEEAIASYDQALNFKPDDHQA 503

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W  RG A   LG   EAI    +AL F+P+     + RGI  F       A+      + 
Sbjct: 504 WYNRGIALFNLGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASYDQALN 563

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
              +  +A+   G+AL  +G                                    E+A+
Sbjct: 564 FKPDKDNAWNNRGIALVELGRL----------------------------------EEAI 589

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               Q L       +A++ RG+ L  LG+ ++AI      L   P   E  Y R +    
Sbjct: 590 ASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASFDQALNFKPDYHEAWYNRGTALVE 649

Query: 632 IGEYREAIKDYDAALDLELD 651
           +G   EAI  +D A+ ++ D
Sbjct: 650 LGRLEEAIASFDQAIKIKSD 669



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 7/218 (3%)

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           +A++ L+KAL F P+S+DIL  +G   F       A+      +    ++  A+   G+A
Sbjct: 451 DALRCLNKALTFTPDSSDILFAKGNALFNLGRLEEAIASYDQALNFKPDDHQAWYNRGIA 510

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
           L ++G  ++A  ++ +A+    +  +AW +      +L   E+A+    Q L        
Sbjct: 511 LFNLGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASYDQALNFKPDKDN 570

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           A++ RG+ L  LG+ ++AI      L   P + +  Y R      +G   EAI  +D AL
Sbjct: 571 AWNNRGIALVELGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASFDQAL 630

Query: 647 DLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           + + D  E       A+Y +  AL    ++      FD
Sbjct: 631 NFKPDYHE-------AWYNRGTALVELGRLEEAIASFD 661



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 72/167 (43%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA V  G+   AI+ +DQ L   P   +A   RG A      LE AI+ F +A+   
Sbjct: 574 NRGIALVELGRLEEAIASYDQALNFKPDDHQAWYNRGIALFNLGRLEEAIASFDQALNFK 633

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    +A++ + +     +  G    K +    A+  
Sbjct: 634 PDYHEAWYNRGTALVELGRLEEAIASFDQAIKIKSDDHQAWNNWGYALVKLERLEEAIAS 693

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
               +K+  +  +A+         +G    A E   ++I L+  + E
Sbjct: 694 FDEALKIKPDKDNAWYNKACCYGLLGNVDLAIENLQQSINLNPKYRE 740


>gi|374578333|ref|ZP_09651429.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. WSM471]
 gi|374426654|gb|EHR06187.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. WSM471]
          Length = 461

 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 135/290 (46%), Gaps = 5/290 (1%)

Query: 331 SSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
           S+I D  S+ S++  + L  + D    TS    +  +     I+     +  +RL   + 
Sbjct: 57  SAIVDQASNPSSDRAAALLVRADANARTSGGLTQALRDIDRAIALDGKNAKAWRLRGDLL 116

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           +   G    A +   + ++ DP   E+   RG     QR L+ A++D+ +AI+  P   +
Sbjct: 117 REAGGDLNRAAADLSKAIELDPQNSESYELRGVVYTNQRRLDRALADYDQAIKLKPDNAQ 176

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           AW  RG      G++ +AI+DLS+AL  +PN       RG    K      AV D    +
Sbjct: 177 AWSDRGVTYYLGGDNEKAIRDLSEALRLDPNGPRSYTNRGAAYKKLGQLAKAVFDDGEAI 236

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQDLANSE 568
           +LD +    Y   GL+L+++GEY KA   + +A++L    NF    G       +L    
Sbjct: 237 RLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSYHLKGELG--- 293

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            AL   +  L +D  F++ Y+ R +L   +G+ KKA+ D  + L +DP N
Sbjct: 294 AALSDYEAALKLDPNFAQTYNNRAVLYKKMGERKKALADYETALRLDPGN 343



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 4/209 (1%)

Query: 444 SNPSA--GEAWKRRGQARAAL-GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDF 499
           SNPS+    A   R  A A   G   +A++D+ +A+  +  +A     RG ++     D 
Sbjct: 64  SNPSSDRAAALLVRADANARTSGGLTQALRDIDRAIALDGKNAKAWRLRGDLLREAGGDL 123

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           N A  DLS  ++LD +N  +Y   G+  ++     +A   + +AI+L  +  +AW     
Sbjct: 124 NRAAADLSKAIELDPQNSESYELRGVVYTNQRRLDRALADYDQAIKLKPDNAQAWSDRGV 183

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            Y    ++EKA+  L + L +D    ++Y  RG     LGQ  KA+ D    + +DP   
Sbjct: 184 TYYLGGDNEKAIRDLSEALRLDPNGPRSYTNRGAAYKKLGQLAKAVFDDGEAIRLDPKVP 243

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDL 648
           E    R     A+GEY +AI DYD AL L
Sbjct: 244 EYYDNRGLSLAAMGEYDKAIADYDQALRL 272



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 89/194 (45%), Gaps = 7/194 (3%)

Query: 502 AVEDLSACVKLDKENKSAYTYLG-LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           A+ D+   + LD +N  A+   G L   + G+  +A     KAI+LD    E++      
Sbjct: 91  ALRDIDRAIALDGKNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQNSESYELRGVV 150

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y +    ++AL    Q + +    ++A+  RG+  +  G ++KAI+DLS  L +DP+   
Sbjct: 151 YTNQRRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNEKAIRDLSEALRLDPNGPR 210

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TAS 674
               R + Y  +G+  +A+ D   A+ L+    E +      L  +  Y K IA Y  A 
Sbjct: 211 SYTNRGAAYKKLGQLAKAVFDDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQAL 270

Query: 675 KINSEFCWFDIDGD 688
           ++     +F   GD
Sbjct: 271 RLAPRPNFFTNRGD 284



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 1/134 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G+ A A+    + ++ DP  PE    RG + A   E + AI+D+ +A++  
Sbjct: 214 NRGAAYKKLGQLAKAVFDDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLA 273

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG +    GE   A+ D   AL+ +PN A   + R ++  K  +   A+ D
Sbjct: 274 PRP-NFFTNRGDSYHLKGELGAALSDYEAALKLDPNFAQTYNNRAVLYKKMGERKKALAD 332

Query: 506 LSACVKLDKENKSA 519
               ++LD  N +A
Sbjct: 333 YETALRLDPGNDNA 346


>gi|434382555|ref|YP_006704338.1| TPR repeat-containing protein [Brachyspira pilosicoli WesB]
 gi|404431204|emb|CCG57250.1| TPR repeat-containing protein [Brachyspira pilosicoli WesB]
          Length = 412

 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 146/287 (50%), Gaps = 7/287 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           + G+A  N G Y  AI  + + +     Y  A   RG AR+     +  I D+ +AI+ +
Sbjct: 130 TNGVALNNMGSYQYAIDKYSEAIDLIDYYALAYYNRGLARSNLGFFKKTIKDYDKAIELS 189

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  +A+  RG A+   G   EAI+D +K +E + N+ D  + RG+     + F+ A++D
Sbjct: 190 KNYKDAYYNRGFAKNNAGLHKEAIEDYNKVIELDTNNIDA-YNRGVSKNYLELFDEAIKD 248

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
            +  ++L+  N  AY   G + + +G YK+A + + K+I+L+ N    + +  LT++   
Sbjct: 249 FNKILELEPNNYCAYGNRGNSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKY--S 306

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   ++A++   + + +   ++ AY  RG     LGQ+K+AI+D    + ++P+      
Sbjct: 307 LGLYKEAIKDYTKAIELTPDYTNAYGNRGSAKDELGQYKEAIEDYDKAIELEPNTAYLYN 366

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
            R       G Y+EA+KDY  A  LELD   ++    +A  +KE  L
Sbjct: 367 DRGWVKKNAGLYKEALKDYKKA--LELDPNNEYAKSNIANLKKEHGL 411



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 112/237 (47%), Gaps = 35/237 (14%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A+ N G +  AI  ++++++ D    +A   RG ++ +    + AI DF + 
Sbjct: 194 DAYYNRGFAKNNAGLHKEAIEDYNKVIELDTNNIDAY-NRGVSKNYLELFDEAIKDFNKI 252

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++  P+   A+  RG ++  LG   EA++D  K++E  PN ++  + RG+  +    +  
Sbjct: 253 LELEPNNYCAYGNRGNSKNDLGLYKEALKDYDKSIELNPNDSNTYNNRGLTKYSLGLYKE 312

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A++D +  ++L  +  +AY   G A   +G+YK+A E + KAI+L+ N            
Sbjct: 313 AIKDYTKAIELTPDYTNAYGNRGSAKDELGQYKEAIEDYDKAIELEPN------------ 360

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                           LY D         RG +    G +K+A+KD    L +DP+N
Sbjct: 361 -------------TAYLYND---------RGWVKKNAGLYKEALKDYKKALELDPNN 395


>gi|423064372|ref|ZP_17053162.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
 gi|406713615|gb|EKD08783.1| tetratricopeptide TPR_2 [Arthrospira platensis C1]
          Length = 608

 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 120/260 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  + G++  AI+ +D+ L  DP    A   RG A       E A+  + +A++ NP
Sbjct: 325 RGLALASLGRFEEAITSYDKTLAVDPSDDSAWYSRGNALMNLGGHEEAVQSYQKALEINP 384

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EAW   G A  +LG   EAI    K+L           ++G        +  A    
Sbjct: 385 DHHEAWHNLGGALTSLGRYQEAIVCYDKSLVANSEQDRSWLDKGSALLNLGRYEEAFASY 444

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++++  N  A+T L   L+ + EY+KA   + KA+ ++ N    W +L     DL +
Sbjct: 445 EKALEVNPSNDLAWTALAGILADLREYQKALTFYEKALSINSNNGLTWYNLGNTLIDLGS 504

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            EKA++C +  L+I+    +A++  G  L  L ++ +A+K     L I P   E  + R 
Sbjct: 505 HEKAVQCYENALFINPDDEQAWYNLGNALAVLKRYGEAVKSYDKALAIKPDKHEAWFNRG 564

Query: 627 SCYHAIGEYREAIKDYDAAL 646
           +     G Y EAI  +D AL
Sbjct: 565 NALDDWGRYEEAIASFDKAL 584



 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 123/262 (46%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+   ++ +F+Q+++  P        RG A A     E AI+ + + +  +PS   AW  
Sbjct: 299 GEMERSLELFNQLVEIKPDNFFMWYLRGLALASLGRFEEAITSYDKTLAVDPSDDSAWYS 358

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A   LG   EA+Q   KALE  P+  +  H  G        +  A+      +  + 
Sbjct: 359 RGNALMNLGGHEEAVQSYQKALEINPDHHEAWHNLGGALTSLGRYQEAIVCYDKSLVANS 418

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           E   ++   G AL ++G Y++A  ++ KA++++ +   AW  L     DL   +KAL   
Sbjct: 419 EQDRSWLDKGSALLNLGRYEEAFASYEKALEVNPSNDLAWTALAGILADLREYQKALTFY 478

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++ L I+      ++  G  L  LG H+KA++   + L I+P + +  Y   +    +  
Sbjct: 479 EKALSINSNNGLTWYNLGNTLIDLGSHEKAVQCYENALFINPDDEQAWYNLGNALAVLKR 538

Query: 635 YREAIKDYDAALDLELDSMEKF 656
           Y EA+K YD AL ++ D  E +
Sbjct: 539 YGEAVKSYDKALAIKPDKHEAW 560



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 144/329 (43%), Gaps = 29/329 (8%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+ G      G+   ++ +++Q+++  P    A  GRG A A     E AI+ F +A++ 
Sbjct: 168 LTEGNHLYEAGEVERSLELYNQVVELQPNQDSAWYGRGVALADLGRNEEAIASFDKALEI 227

Query: 445 NPSAGE--AWKRRGQARAALGESVEAIQDLSKALEFEPNS-----------------ADI 485
           NP   +   W  RG     L +  +AI    +AL   PN                  AD 
Sbjct: 228 NPEPEDDGIWISRGNVLVKLNKYKDAITSFDRALAINPNDQQVSQKREDLLNQLNQLADN 287

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L ++ +  +   +   ++E  +  V++  +N   +   GLAL+S+G +++A  ++ K + 
Sbjct: 288 LFDQAMGLYGAGEMERSLELFNQLVEIKPDNFFMWYLRGLALASLGRFEEAITSYDKTLA 347

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +D +   AW        +L   E+A++  Q+ L I+    +A+H  G  L  LG++++AI
Sbjct: 348 VDPSDDSAWYSRGNALMNLGGHEEAVQSYQKALEINPDHHEAWHNLGGALTSLGRYQEAI 407

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL------DLELDSMEKFVLQ 659
                 L  +         + S    +G Y EA   Y+ AL      DL   ++   +L 
Sbjct: 408 VCYDKSLVANSEQDRSWLDKGSALLNLGRYEEAFASYEKALEVNPSNDLAWTALAG-ILA 466

Query: 660 CLAFYQKEIALY-TASKINSE--FCWFDI 685
            L  YQK +  Y  A  INS     W+++
Sbjct: 467 DLREYQKALTFYEKALSINSNNGLTWYNL 495



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 119/280 (42%), Gaps = 29/280 (10%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E L+  G       E+E ++  + + ++  P+   AW  RG A A LG + EAI    KA
Sbjct: 165 ENLLTEGNHLYEAGEVERSLELYNQVVELQPNQDSAWYGRGVALADLGRNEEAIASFDKA 224

Query: 476 LEFEPNSAD--ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           LE  P   D  I   RG V  K   +  A+      + ++  ++                
Sbjct: 225 LEINPEPEDDGIWISRGNVLVKLNKYKDAITSFDRALAINPNDQQV-------------S 271

Query: 534 KKAEEAHLKAIQL-DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           +K E+   +  QL D  F +A G            E++LE   Q++ I       ++LRG
Sbjct: 272 QKREDLLNQLNQLADNLFDQAMGLYGA-----GEMERSLELFNQLVEIKPDNFFMWYLRG 326

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           L L  LG+ ++AI      L +DPS+    Y R +    +G + EA++ Y  AL++  D 
Sbjct: 327 LALASLGRFEEAITSYDKTLAVDPSDDSAWYSRGNALMNLGGHEEAVQSYQKALEINPDH 386

Query: 653 MEKF-----VLQCLAFYQKEIALYTASKI-NSE--FCWFD 684
            E +      L  L  YQ+ I  Y  S + NSE    W D
Sbjct: 387 HEAWHNLGGALTSLGRYQEAIVCYDKSLVANSEQDRSWLD 426



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 96/215 (44%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A  + G+Y  AI  +D+ L  +     + + +G+A       E A + + +A++ NPS
Sbjct: 394 GGALTSLGRYQEAIVCYDKSLVANSEQDRSWLDKGSALLNLGRYEEAFASYEKALEVNPS 453

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              AW       A L E  +A+    KAL    N+    +  G           AV+   
Sbjct: 454 NDLAWTALAGILADLREYQKALTFYEKALSINSNNGLTWYNLGNTLIDLGSHEKAVQCYE 513

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + ++ +++ A+  LG AL+ +  Y +A +++ KA+ +  +  EAW +      D    
Sbjct: 514 NALFINPDDEQAWYNLGNALAVLKRYGEAVKSYDKALAIKPDKHEAWFNRGNALDDWGRY 573

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           E+A+    + L I+     A H R + L  LG+++
Sbjct: 574 EEAIASFDKALAINPHNEAARHNRSVALRNLGRYE 608



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 111/266 (41%), Gaps = 21/266 (7%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILK--EDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           L R   Q   G    AI+  DQ +K  +D +       +      Q  L+ A+S F +A+
Sbjct: 13  LKRAEKQSELGNIDEAIAACDQAIKKSDDNLAYSPWCKKAYLLIQQERLDEALSCFQKAL 72

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
             N      W  + +    L    EAI+   +A++ +PNS  +  E+G +  +      A
Sbjct: 73  NINSRFDPIWHDQAKILVQLNRIDEAIKSYDQAIKIKPNSDSLWIEKGDLLVQQNQTRLA 132

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
            +     ++++  N      L   L+ + E             L  N L    HL +   
Sbjct: 133 ADSYQRALEINPNNHQVSQKLEGLLNQLQE-------------LAENLLTEGNHLYE--- 176

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS-NIEC 621
                E++LE   QV+ +      A++ RG+ L  LG++++AI      L I+P    + 
Sbjct: 177 -AGEVERSLELYNQVVELQPNQDSAWYGRGVALADLGRNEEAIASFDKALEINPEPEDDG 235

Query: 622 LYL-RASCYHAIGEYREAIKDYDAAL 646
           +++ R +    + +Y++AI  +D AL
Sbjct: 236 IWISRGNVLVKLNKYKDAITSFDRAL 261


>gi|119487585|ref|ZP_01621195.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119455754|gb|EAW36890.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 1107

 Score =  103 bits (257), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 159/339 (46%), Gaps = 32/339 (9%)

Query: 332 SISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQ 391
           S +D+   ++ E+ + L  K++ LK   ++AK    FCV                     
Sbjct: 271 SQTDDIFVENAENITPLETKYNELKAYQSQAK----FCV--------------------- 305

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
            ++G++  AI+I  Q LK  P +  A +  G A  FQ +LEAAI  +++ ++  P+  E 
Sbjct: 306 -DQGQFEQAITICQQALKIQPKFYHAYVILGNALHFQGKLEAAIRAYSQVLKLQPNFAEI 364

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +  RG   A L +  +AI D  +ALE +PN A +    G +  +   F  +++     ++
Sbjct: 365 YGNRGTMYAKLNQIDKAIADYQQALELQPNFAVVHWNLGKIFQRLGRFEESIKSWKTALE 424

Query: 512 LDKENKSA--YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           +      A  +  LG  L+   ++K A  ++ KA+++  + +EA  +L   Y +    E 
Sbjct: 425 IQPNLNGAKLHIELGNLLTGQKQFKAAISSYQKALEIQPSEVEAHLNLGCLYSEQKQYET 484

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A++  Q  + I+ +    Y   G  L  L  H++AI    + L I P N E      + Y
Sbjct: 485 AIKTFQAGIQINPKNLDLYLNMGFALVKLNHHQEAINCYQNLLNIQPDNKEAYASLGNIY 544

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKFVLQC-LAFYQKE 667
              G+ ++AI++Y+ A+ ++ D  E +   C LA  QK+
Sbjct: 545 ANAGQVKQAIENYEQAIKIKPDWAEIY---CRLAHIQKQ 580



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 6/216 (2%)

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI---LHERGIVNFKFKDFNA 501
           N  + E + + G      G+   AI    +AL+  P+ A+I   L E  ++N + +   A
Sbjct: 2   NFESVETYFKTGIEFQEAGKWGSAIASYQQALQIAPHQAEIYQKLAEAFVLNGQLE---A 58

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            ++ +   V L      AY  +G  L    + + A  A+ +A+ +   F EA  +L   Y
Sbjct: 59  GIKAIQTAVNLKPNFAVAYLSIGNVLQQQNQIELAIWAYTEALDVKPEFTEAQANLGSMY 118

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             L    +A++C Q+ +Y D   +  Y + G       Q +KAI      + + P+ ++ 
Sbjct: 119 YHLQRFSEAIQCYQKAIYFDSNSAIIYWMLGNAFSQTDQLEKAISCYQKAIDLQPNQVKF 178

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
               A+     G+  +AI  Y   L L+ D  E  V
Sbjct: 179 YLKLAAILDIQGKTIQAISYYQTILRLQPDCSEAIV 214



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 84/208 (40%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           SV+     GI     GK+ SAI+ + Q L+  P   E       A     +LEA I    
Sbjct: 5   SVETYFKTGIEFQEAGKWGSAIASYQQALQIAPHQAEIYQKLAEAFVLNGQLEAGIKAIQ 64

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            A+   P+   A+   G       +   AI   ++AL+ +P   +     G + +  + F
Sbjct: 65  TAVNLKPNFAVAYLSIGNVLQQQNQIELAIWAYTEALDVKPEFTEAQANLGSMYYHLQRF 124

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           + A++     +  D  +   Y  LG A S   + +KA   + KAI L  N ++ +  L  
Sbjct: 125 SEAIQCYQKAIYFDSNSAIIYWMLGNAFSQTDQLEKAISCYQKAIDLQPNQVKFYLKLAA 184

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKA 587
                  + +A+   Q +L +    S+A
Sbjct: 185 ILDIQGKTIQAISYYQTILRLQPDCSEA 212



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 75/184 (40%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           +AI+ + +A+Q  P   E +++  +A    G+    I+ +  A+  +PN A      G V
Sbjct: 24  SAIASYQQALQIAPHQAEIYQKLAEAFVLNGQLEAGIKAIQTAVNLKPNFAVAYLSIGNV 83

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             +      A+   +  + +  E   A   LG     +  + +A + + KAI  D N   
Sbjct: 84  LQQQNQIELAIWAYTEALDVKPEFTEAQANLGSMYYHLQRFSEAIQCYQKAIYFDSNSAI 143

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +  L   +      EKA+ C Q+ + +     K Y     +L   G+  +AI    + L
Sbjct: 144 IYWMLGNAFSQTDQLEKAISCYQKAIDLQPNQVKFYLKLAAILDIQGKTIQAISYYQTIL 203

Query: 613 GIDP 616
            + P
Sbjct: 204 RLQP 207


>gi|338738138|ref|YP_004675100.1| hypothetical protein HYPMC_1295 [Hyphomicrobium sp. MC1]
 gi|337758701|emb|CCB64526.1| TPR repeat-containing protein [Hyphomicrobium sp. MC1]
          Length = 557

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 125/271 (46%), Gaps = 2/271 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R +A V  G+  +A+  +++ ++  P YP A   RG       +L+ A+ DF  A+   P
Sbjct: 74  RAVANVRLGETKAALEDYNRAVELFPEYPVAYNNRGNLLLALGQLKEAMKDFDRALLLAP 133

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S   A+  RG AR  LG+S  A+ D +KA+E  P SA  L  RG+        +AA+ D 
Sbjct: 134 SFAAAYSNRGNARMKLGQSAAALADFTKAIELMPASAPPLSGRGLAYLSVGKPHAAIRDF 193

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  V  D    +AY     A  ++G+   A E   +AI  D N  E +      Y    N
Sbjct: 194 SRAVSADARFAAAYRNRAEARMAVGQRDDAIEDLSRAIAFDPNNGELYVVRGYAYLISGN 253

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-HKKAIKDLSSGLGIDPSNIECLYLR 625
           +  A++   + + +D + S  Y  RGL  +G+ +    A  DL+  + +DP +      R
Sbjct: 254 AASAIKDFSRAIELDPKSSAGYEGRGLA-NGVAEAFDDANSDLNRAIELDPRSPVAFAFR 312

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           A  Y   G+     KD + A+ L+ +S E  
Sbjct: 313 AYIYKQNGQPDIGAKDVETAIKLDTNSPEAL 343



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 148/329 (44%), Gaps = 15/329 (4%)

Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKL 348
           D    N+R     N     + +L    A+L D N   E + +  ++ N       +R  L
Sbjct: 59  DTGLPNDRRATILNDRAVANVRLGETKAALEDYNRAVELFPEYPVAYN-------NRGNL 111

Query: 349 SFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQIL 408
                 LKE   +  R        +  + S +  +  +RG A++  G+ A+A++ F + +
Sbjct: 112 LLALGQLKEAMKDFDRA-------LLLAPSFAAAYS-NRGNARMKLGQSAAALADFTKAI 163

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           +  P     L GRG A     +  AAI DF+ A+ ++     A++ R +AR A+G+  +A
Sbjct: 164 ELMPASAPPLSGRGLAYLSVGKPHAAIRDFSRAVSADARFAAAYRNRAEARMAVGQRDDA 223

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I+DLS+A+ F+PN+ ++   RG       +  +A++D S  ++LD ++ + Y   GLA  
Sbjct: 224 IEDLSRAIAFDPNNGELYVVRGYAYLISGNAASAIKDFSRAIELDPKSSAGYEGRGLANG 283

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
               +  A     +AI+LD     A+      Y+     +   + ++  + +D    +A 
Sbjct: 284 VAEAFDDANSDLNRAIELDPRSPVAFAFRAYIYKQNGQPDIGAKDVETAIKLDTNSPEAL 343

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             RG +    GQ   AI DL   L + PS
Sbjct: 344 WARGEIEEANGQADTAITDLRHALQLRPS 372



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 97/242 (40%), Gaps = 34/242 (14%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           R  A     E +AA+ D+  A++  P    A+  RG    ALG+  EA++D  +AL   P
Sbjct: 74  RAVANVRLGETKAALEDYNRAVELFPEYPVAYNNRGNLLLALGQLKEAMKDFDRALLLAP 133

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           + A     RG    K     AA+ D +  ++L   +    +  GLA  S+G+        
Sbjct: 134 SFAAAYSNRGNARMKLGQSAAALADFTKAIELMPASAPPLSGRGLAYLSVGK-------- 185

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
                                        A+    + +  D RF+ AY  R      +GQ
Sbjct: 186 --------------------------PHAAIRDFSRAVSADARFAAAYRNRAEARMAVGQ 219

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
              AI+DLS  +  DP+N E   +R   Y   G    AIKD+  A++L+  S   +  + 
Sbjct: 220 RDDAIEDLSRAIAFDPNNGELYVVRGYAYLISGNAASAIKDFSRAIELDPKSSAGYEGRG 279

Query: 661 LA 662
           LA
Sbjct: 280 LA 281


>gi|409994020|ref|ZP_11277142.1| hypothetical protein APPUASWS_22928 [Arthrospira platensis str.
           Paraca]
 gi|409935094|gb|EKN76636.1| hypothetical protein APPUASWS_22928 [Arthrospira platensis str.
           Paraca]
          Length = 636

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 152/345 (44%), Gaps = 7/345 (2%)

Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
           K  SN      +        S+ +  D  L +G A +NE +Y  AI+  D+ L+ +P   
Sbjct: 248 KSPSNHDNHELRLPPKHPPTSQPLIADDFLKKGEALINERQYKQAIASCDRALEINPDLD 307

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           EA   +G A    ++   A+  +   ++  P   +AW  RG     L    +A+   ++A
Sbjct: 308 EAWYQKGNALVQLKQYSEALECYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQA 367

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L+ +PN     H RG +  KF+ +  A+E     +KL+  +   +   G  LS +  Y++
Sbjct: 368 LKIQPNDYAAWHNRGALLRKFQKYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQE 427

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A  ++ +AIQ++    + W +       +    +AL C +Q + ++ +  + +  +G +L
Sbjct: 428 AISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVL 487

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
             L +H++A+      + +   + E    R     A+ +Y +A+ ++D  + L+ D+ + 
Sbjct: 488 VKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQ- 546

Query: 656 FVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                 A+ Q+ I L    + +     FD    + P   E W  R
Sbjct: 547 ------AWCQRGICLEKLERHDDAIACFDTAIALKPDHAESWRHR 585



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 2/282 (0%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT-ARAF 427
           C  R  K +    D   +RG   V   +Y+ A+S ++Q LK  P    A   RG   R F
Sbjct: 329 CYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGALLRKF 388

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q+  E A+  +  AI+   +  E W  RG   + L    EAI    +A++  P   DI  
Sbjct: 389 QK-YEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 447

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG+       ++ A+      + L+ +    +   G  L  +  +++A   + +AI L 
Sbjct: 448 NRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 507

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +  EAW    +    L   E+AL    +V+ +     +A+  RG+ L  L +H  AI  
Sbjct: 508 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAIAC 567

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             + + + P + E    R +    + +Y+EAI     A+ ++
Sbjct: 568 FDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQ 609



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 80/169 (47%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG+A  +  +Y+ A+S ++Q +  +   PE  I +G         E A+  +  A
Sbjct: 444 DIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRA 503

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I     + EAW  RG+   AL +  +A+ +  + +  +P++     +RGI   K +  + 
Sbjct: 504 ISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDD 563

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           A+      + L  ++  ++ + G  LS + +Y++A  +  KAI + +  
Sbjct: 564 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKEL 612



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 80/199 (40%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG       +Y  AIS +D+ ++ +P   +    RG A     +   A+S + +AI  N
Sbjct: 414 NRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLN 473

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               E W  +G     L    EA+    +A+  + +S +    RG +    K +  A+ +
Sbjct: 474 SKEPELWISQGGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALAN 533

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L  +   A+   G+ L  +  +  A      AI L  +  E+W H       L 
Sbjct: 534 WDRVIALQPDAYQAWCQRGICLEKLERHDDAIACFDTAIALKPDHAESWRHRGALLSRLK 593

Query: 566 NSEKALECLQQVLYIDKRF 584
             ++A+  L + + I K  
Sbjct: 594 KYQEAIASLGKAISIQKEL 612


>gi|406884520|gb|EKD31910.1| hypothetical protein ACD_77C00219G0007 [uncultured bacterium]
          Length = 664

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 132/279 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG   + EGKY  AI  F+ + + D    EA   RG A+    +   A  DF + ++ N 
Sbjct: 31  RGRQFLIEGKYTQAIENFNILTQLDTTLYEAYFFRGIAKYNLGDFLGAQIDFDKTLKINQ 90

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  R    + +G+   A++DL +A++  P+   +   RG+  F  + F  AV+D 
Sbjct: 91  LYTPAYHYRAITLSRIGKYDLALKDLEEAVDLRPSYTGLYFSRGVTYFLSQQFEKAVQDF 150

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++ + +   AY   G +   +G+  KA   +  AI L+R   E +   ++ Y     
Sbjct: 151 NRFLRFEPKVPDAYLNRGASYLFLGDTTKALGDYNTAISLNRFDPEGYIRRSRIYVLQNE 210

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           ++KALE L Q L +D   S  Y  R L+ +   +   A+ DL   L  DP N   LY RA
Sbjct: 211 NKKALEDLNQALLLDTANSFGYFNRALVRYNNKEIMGALSDLERVLRDDPGNALTLYNRA 270

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                IG+Y  A++DYD  +++  +++  +  +   F Q
Sbjct: 271 LIRSQIGDYNNALEDYDRVIEINPNNVLAYYNRAALFLQ 309



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 130/310 (41%), Gaps = 22/310 (7%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            SRG+      ++  A+  F++ L+ +P  P+A + RG +  F  +   A+ D+  AI  
Sbjct: 131 FSRGVTYFLSQQFEKAVQDFNRFLRFEPKVPDAYLNRGASYLFLGDTTKALGDYNTAISL 190

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N    E + RR +      E+ +A++DL++AL  +  ++     R +V +  K+   A+ 
Sbjct: 191 NRFDPEGYIRRSRIYVLQNENKKALEDLNQALLLDTANSFGYFNRALVRYNNKEIMGALS 250

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           DL   ++ D  N        L  S IG+Y  A E + + I+++ N + A+ +    +  L
Sbjct: 251 DLERVLRDDPGNALTLYNRALIRSQIGDYNNALEDYDRVIEINPNNVLAYYNRAALFLQL 310

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
                A++   Q + +   F+ AY  R  +   +GQ   A  D      I    I     
Sbjct: 311 GKFRDAMDDYSQAINLYPDFANAYLNRSYVKSQMGQFTSAKSDYE----IAQKKIREYKS 366

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           R      I  + +  K YD  L L+ D           F +K+         N    + D
Sbjct: 367 RIGDSTLISAFADTTKKYDKLLTLDAD-----------FAKKDFK-------NELLQYKD 408

Query: 685 IDGDIDPLFK 694
           +D  + PLFK
Sbjct: 409 VDIRLKPLFK 418



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 2/154 (1%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R SR     NE K   A+   +Q L  D         R   R   +E+  A+SD    ++
Sbjct: 200 RRSRIYVLQNENK--KALEDLNQALLLDTANSFGYFNRALVRYNNKEIMGALSDLERVLR 257

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            +P        R   R+ +G+   A++D  + +E  PN+    + R  +  +   F  A+
Sbjct: 258 DDPGNALTLYNRALIRSQIGDYNNALEDYDRVIEINPNNVLAYYNRAALFLQLGKFRDAM 317

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
           +D S  + L  +  +AY       S +G++  A+
Sbjct: 318 DDYSQAINLYPDFANAYLNRSYVKSQMGQFTSAK 351


>gi|428214976|ref|YP_007088120.1| hypothetical protein Oscil6304_4688 [Oscillatoria acuminata PCC
           6304]
 gi|428003357|gb|AFY84200.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
          Length = 291

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 125/277 (45%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I+ ++ + V+F   +G++    G Y  AI+ +D+ L+ DP   E    RG A        
Sbjct: 5   ITCARGLEVEFFFRKGLSLSEAGNYTGAIASYDKALELDPNADEIWYCRGNALYNLGRTN 64

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI  +  A++ NP   +A   RG A    G   EA++   + L  +P+     + RGI 
Sbjct: 65  PAIKSYDMALELNPGCYQALINRGNALDDSGRHQEAVESYDRVLRLKPDHHRTWNNRGIA 124

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
                 ++ A+      ++   +   A+ + GLAL S+G  +K    + KA+    +F E
Sbjct: 125 LGNLGKYDEAIASYDRAIEFKPDYSRAWYHRGLALKSMGLTEKTLACYDKALASQPDFYE 184

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            W +       L    +A+    + +     +  A++ RG++L  L ++++AI  L   +
Sbjct: 185 VWNNRGNTLYLLKRYSEAISSYDKAVQSFPNYHWAWYNRGVVLQELNRNEEAIVSLDKAV 244

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            ++P N E  Y RA    A+   R A   YD A +L+
Sbjct: 245 TLNPKNAEAWYYRALALEALDCTRSAAASYDKAYELK 281



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 77/165 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N GKY  AI+ +D+ ++  P Y  A   RG A       E  ++ + +A+ S 
Sbjct: 120 NRGIALGNLGKYDEAIASYDRAIEFKPDYSRAWYHRGLALKSMGLTEKTLACYDKALASQ 179

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E W  RG     L    EAI    KA++  PN     + RG+V  +      A+  
Sbjct: 180 PDFYEVWNNRGNTLYLLKRYSEAISSYDKAVQSFPNYHWAWYNRGVVLQELNRNEEAIVS 239

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           L   V L+ +N  A+ Y  LAL ++   + A  ++ KA +L  N 
Sbjct: 240 LDKAVTLNPKNAEAWYYRALALEALDCTRSAAASYDKAYELKPNL 284



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 7/177 (3%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GL+LS  G Y  A  ++ KA++LD N  E W        +L  +  A++     L ++  
Sbjct: 20  GLSLSEAGNYTGAIASYDKALELDPNADEIWYCRGNALYNLGRTNPAIKSYDMALELNPG 79

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
             +A   RG  L   G+H++A++     L + P +      R      +G+Y EAI  YD
Sbjct: 80  CYQALINRGNALDDSGRHQEAVESYDRVLRLKPDHHRTWNNRGIALGNLGKYDEAIASYD 139

Query: 644 AALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            A++ + D          A+Y + +AL +          +D      P F E W  R
Sbjct: 140 RAIEFKPDYSR-------AWYHRGLALKSMGLTEKTLACYDKALASQPDFYEVWNNR 189



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 92/243 (37%), Gaps = 42/243 (17%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
           E + R+G + +  G    AI    KALE +PN+ +I + RG   +     N A++     
Sbjct: 14  EFFFRKGLSLSEAGNYTGAIASYDKALELDPNADEIWYCRGNALYNLGRTNPAIKSYDMA 73

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           ++L+     A    G AL   G +++A E++ + ++L  +    W +             
Sbjct: 74  LELNPGCYQALINRGNALDDSGRHQEAVESYDRVLRLKPDHHRTWNN------------- 120

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
                                RG+ L  LG++ +AI      +   P      Y R    
Sbjct: 121 ---------------------RGIALGNLGKYDEAIASYDRAIEFKPDYSRAWYHRGLAL 159

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY---TASKINSEFC 681
            ++G   + +  YD AL  + D  E +      L  L  Y + I+ Y     S  N  + 
Sbjct: 160 KSMGLTEKTLACYDKALASQPDFYEVWNNRGNTLYLLKRYSEAISSYDKAVQSFPNYHWA 219

Query: 682 WFD 684
           W++
Sbjct: 220 WYN 222


>gi|406912627|gb|EKD52197.1| peptidase C14 caspase catalytic subunit P20 [uncultured bacterium]
          Length = 714

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 114/231 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G +  AIS F Q LK D         RGTA   ++  E AI+DF +AI+ N
Sbjct: 363 NRGKAWFKTGHFDEAISDFTQALKIDEHDANTYYDRGTAWLEKKNYEQAITDFNKAIEEN 422

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG+A  A  +  +A++D SKA++  P      + RG +      ++ A+ D
Sbjct: 423 PNLDIAFYNRGRAWKAKQDITKALEDYSKAIDINPIFESAYNNRGNLYLGNGFYDKAIAD 482

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  ++++     AY+  GLA S +GEY KA E + KA+ ++ + + A+ +    +  + 
Sbjct: 483 FSKLIEINPSRSDAYSNRGLAWSGVGEYSKAIEDYDKALLIEPSNIHAYVNRGVAWVHMG 542

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
              KA +   + L I+  FS AY  R  L    G    A+ D++  +   P
Sbjct: 543 EIHKAFDDYNKALQINPNFSHAYANRANLFLQTGNLNSAMTDIAFAMNSKP 593



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 127/264 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG A    G    A+  +   L  D    +A    G A + +   E AI  ++ AI+ 
Sbjct: 294 VNRGYAWQAGGDVDRALDAYAIALMLDSKNEDAYFNSGNAWSDKGNFEKAIGAYSNAIEF 353

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P   + +  RG+A    G   EAI D ++AL+ + + A+  ++RG    + K++  A+ 
Sbjct: 354 DPQNHKLYANRGKAWFKTGHFDEAISDFTQALKIDEHDANTYYDRGTAWLEKKNYEQAIT 413

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++ +     A+   G A  +  +  KA E + KAI ++  F  A+ +    Y   
Sbjct: 414 DFNKAIEENPNLDIAFYNRGRAWKAKQDITKALEDYSKAIDINPIFESAYNNRGNLYLGN 473

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              +KA+    +++ I+   S AY  RGL   G+G++ KAI+D    L I+PSNI     
Sbjct: 474 GFYDKAIADFSKLIEINPSRSDAYSNRGLAWSGVGEYSKAIEDYDKALLIEPSNIHAYVN 533

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R   +  +GE  +A  DY+ AL +
Sbjct: 534 RGVAWVHMGEIHKAFDDYNKALQI 557



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 137/294 (46%), Gaps = 7/294 (2%)

Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
           IL     Y    + RG A     +++ A+  +  A+  +    +A+   G A +  G   
Sbjct: 282 ILTLRQYYSSDYVNRGYAWQAGGDVDRALDAYAIALMLDSKNEDAYFNSGNAWSDKGNFE 341

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           +AI   S A+EF+P +  +   RG   FK   F+ A+ D +  +K+D+ + + Y   G A
Sbjct: 342 KAIGAYSNAIEFDPQNHKLYANRGKAWFKTGHFDEAISDFTQALKIDEHDANTYYDRGTA 401

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
                 Y++A     KAI+ + N   A+ +  + ++   +  KALE   + + I+  F  
Sbjct: 402 WLEKKNYEQAITDFNKAIEENPNLDIAFYNRGRAWKAKQDITKALEDYSKAIDINPIFES 461

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RG L  G G + KAI D S  + I+PS  +    R   +  +GEY +AI+DYD AL
Sbjct: 462 AYNNRGNLYLGNGFYDKAIADFSKLIEINPSRSDAYSNRGLAWSGVGEYSKAIEDYDKAL 521

Query: 647 DLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            +E  ++  +V        + +A     +I+  F  ++    I+P F   +  R
Sbjct: 522 LIEPSNIHAYV-------NRGVAWVHMGEIHKAFDDYNKALQINPNFSHAYANR 568


>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
 gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
          Length = 632

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 155/349 (44%), Gaps = 5/349 (1%)

Query: 348 LSFKWDMLKETSNEAKRNKKF-----CVTRISKSKSISVDFRLSRGIAQVNEGKYASAIS 402
           L+   D L E  N A+    F        ++ K    + D     GIA  N+GK   AI+
Sbjct: 22  LAQNIDQLFEQGNAAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIA 81

Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
            ++  ++ +P Y E     G A  +Q +LE AI+ +  AI+ NP+  E +   G A +  
Sbjct: 82  AYNTAIEINPNYAEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLGFALSNQ 141

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G+  EAI   +KA+E  PN A      GI  +       A+   +  ++++      Y+ 
Sbjct: 142 GKLEEAIAAYNKAIEINPNYAFAYIGLGIALYNQGKLEEAIAAYNKAIEINPNYAEVYSN 201

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
           LG AL + G+ ++A  A+  AI+++ N   A+ +L     +    E+A+      + I+ 
Sbjct: 202 LGFALYNQGKLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEINP 261

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
             + AY+  G+ L+  G+ ++AI   ++ + I+P++           H  G+  EAI  Y
Sbjct: 262 NDAFAYNNLGVALYNQGKLEEAIAAYNTAIEINPNDAFAYIGLGIALHDQGKLEEAIAAY 321

Query: 643 DAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +  L L     ++  +  LA      AL    K+      ++    IDP
Sbjct: 322 NKTLSLADKKADRASVHTLAHTTLGYALQQQGKLEEAIAEYEKALKIDP 370



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 41/216 (18%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +  GIA  N+GK   AI+ +++ ++ +P Y E     G A   Q +LE AI+ +  AI+ 
Sbjct: 166 IGLGIALYNQGKLEEAIAAYNKAIEINPNYAEVYSNLGFALYNQGKLEEAIAAYNTAIEI 225

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+   G A +  G+  EAI   + A+E  PN A   +  G+  +       A+ 
Sbjct: 226 NPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEINPNDAFAYNNLGVALYNQGKLEEAIA 285

Query: 505 DLSACVKLDKENKSAY-----------------------------------------TYL 523
             +  ++++  +  AY                                         T L
Sbjct: 286 AYNTAIEINPNDAFAYIGLGIALHDQGKLEEAIAAYNKTLSLADKKADRASVHTLAHTTL 345

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           G AL   G+ ++A   + KA+++D N   A  +L +
Sbjct: 346 GYALQQQGKLEEAIAEYEKALKIDPNNTTAQNNLKE 381


>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
          Length = 1979

 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 146/316 (46%), Gaps = 7/316 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+A +   K   A+  FDQ+L  +P   +AL  +G A A   + EAA+  +  A++ 
Sbjct: 43  FNRGLALLKIKKPEEALDSFDQVLHFEPENFDALYKKGIALATLEKFEAALETYDNALEI 102

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   + W ++G A A L ++  +I    KA+E EP      + RG V  K  ++  A+E
Sbjct: 103 NPDNPKIWYQKGLAFAELEKNEASILCFEKAIELEPECGSAWYARGTVTGKTGNYEEALE 162

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++++ +N  A    GL L+++ +Y +A E     I+      +AW         L
Sbjct: 163 CFEHALEINPKNSDACYSKGLVLANLEKYGEALECFDSLIREKPRHKDAWKQKYFSLIKL 222

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             +E+ALEC+   L        A + +G+LL+ L +++ A K  +  L I+P N E    
Sbjct: 223 GKNEEALECVDAFLRKFPVSETALYQKGILLNELSRYEDAEKTFTKILKINPGNKEIWLK 282

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           +      +    +AIK ++ A+ L+    E +  +CLA  + E+              FD
Sbjct: 283 KGLALIQLLRLNDAIKAFEEAIKLDPTYFEAWNYKCLALMKLEV-------YEEALEAFD 335

Query: 685 IDGDIDPLFKEYWCKR 700
              +I P  KE W  R
Sbjct: 336 SVLEIYPETKEIWYNR 351



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 129/266 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +A V    +  A   F +  + DP Y +AL  +G   A + + E A+  F   ++ N
Sbjct: 350 NRALALVKLQHFGEAAKSFSRTAELDPAYGDALYQQGRLLAREGKYEEALKAFDSMLEQN 409

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A K RG     LG   EA+  L+++LE EP +  +  ++G++      F  A++ 
Sbjct: 410 PEFIKAQKLRGTMLIKLGRIEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKA 469

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L    +L  +N + +   G AL S+  Y++A E   + ++L+    + W +       L 
Sbjct: 470 LEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEGLRLNPYLEKGWNNKGIVLGKLG 529

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +E+ALE  ++ + +   F  A+  RGL+L  +  ++KA +     L  +P +++ +Y R
Sbjct: 530 RTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASEAFDEVLKTNPEDLDSIYNR 589

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
            +    +G+   A++ ++  L L  D
Sbjct: 590 GTALLKLGKTETALECFEKILSLNPD 615



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 122/262 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG      G Y  A+  F+  L+ +P   +A   +G   A   +   A+  F   I+  
Sbjct: 146 ARGTVTGKTGNYEEALECFEHALEINPKNSDACYSKGLVLANLEKYGEALECFDSLIREK 205

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AWK++  +   LG++ EA++ +   L   P S   L+++GI+  +   +  A + 
Sbjct: 206 PRHKDAWKQKYFSLIKLGKNEEALECVDAFLRKFPVSETALYQKGILLNELSRYEDAEKT 265

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K++  NK  +   GLAL  +     A +A  +AI+LD  + EAW +       L 
Sbjct: 266 FTKILKINPGNKEIWLKKGLALIQLLRLNDAIKAFEEAIKLDPTYFEAWNYKCLALMKLE 325

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+ALE    VL I     + ++ R L L  L    +A K  S    +DP+  + LY +
Sbjct: 326 VYEEALEAFDSVLEIYPETKEIWYNRALALVKLQHFGEAAKSFSRTAELDPAYGDALYQQ 385

Query: 626 ASCYHAIGEYREAIKDYDAALD 647
                  G+Y EA+K +D+ L+
Sbjct: 386 GRLLAREGKYEEALKAFDSMLE 407



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 122/280 (43%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           CV    +   +S      +GI      +Y  A   F +ILK +P   E  + +G A    
Sbjct: 231 CVDAFLRKFPVSETALYQKGILLNELSRYEDAEKTFTKILKINPGNKEIWLKKGLALIQL 290

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
             L  AI  F EAI+ +P+  EAW  +  A   L    EA++     LE  P + +I + 
Sbjct: 291 LRLNDAIKAFEEAIKLDPTYFEAWNYKCLALMKLEVYEEALEAFDSVLEIYPETKEIWYN 350

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           R +   K + F  A +  S   +LD     A    G  L+  G+Y++A +A    ++ + 
Sbjct: 351 RALALVKLQHFGEAAKSFSRTAELDPAYGDALYQQGRLLAREGKYEEALKAFDSMLEQNP 410

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            F++A          L   E+AL+ L Q L  +      +  +GL+L   G+ + A+K L
Sbjct: 411 EFIKAQKLRGTMLIKLGRIEEALDSLAQSLEKEPENYGLWLQQGLILLDNGKFEPALKAL 470

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
                + P N  C   +    +++  Y EA++D++  L L
Sbjct: 471 EKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEGLRL 510



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 120/257 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G     EGKY  A+  FD +L+++P + +A   RGT       +E A+    ++++  P
Sbjct: 385 QGRLLAREGKYEEALKAFDSMLEQNPEFIKAQKLRGTMLIKLGRIEEALDSLAQSLEKEP 444

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                W ++G      G+   A++ L K  E +P++      +G   +    +  A+ED 
Sbjct: 445 ENYGLWLQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEALEDF 504

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L+   +  +   G+ L  +G  ++A EA  KA+ L  +F +AW +       + +
Sbjct: 505 EEGLRLNPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDD 564

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            EKA E   +VL  +     + + RG  L  LG+ + A++     L ++P   + LY  A
Sbjct: 565 YEKASEAFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLA 624

Query: 627 SCYHAIGEYREAIKDYD 643
                +G+  EA++ ++
Sbjct: 625 VAQAKLGKQEEALETFE 641



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 120/595 (20%), Positives = 245/595 (41%), Gaps = 29/595 (4%)

Query: 75   RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
            + F   QLE +   ++  + AL+  P     +  +G +   +   EEA       +E ++
Sbjct: 771  KGFAQMQLERYLPALKTFESALEEKPNSDILWYYRGLSLYRINMLEEAAC----AFESSV 826

Query: 135  HQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNK 194
              + ++K+ LE           R++ C ++     ++L   E+ L  N +    S  H K
Sbjct: 827  RLNPEMKEALEY----------RAI-CLFETEQYKAALKALEAVLEGNPE--NLSALHKK 873

Query: 195  SDICDSSSQSRDVSETCSKSSH-DPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVSEN 253
            +       + +  +ET  +    DP+     + E K    +   +SG   N  L    E 
Sbjct: 874  AICFLQLKKYKSGAETLLRVLELDPN-----NKEVKFELGIASFESG-EYNKALSLFEEV 927

Query: 254  HNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSS 313
              GS D S      +++ E+N    +   +    I + + +E++  + N +   + + + 
Sbjct: 928  SEGSDD-SFVYCPEKNSYELNNSEQN---VSEQGISEQNFSEQNNSEQNFSEQNNSEQNF 983

Query: 314  DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLS-FKWDMLKETSNEAKRNKKFCVTR 372
               S+++ N +++ +S+ + S  K S+ + S+ K S F W  L     EA        +R
Sbjct: 984  SEQSISEQNNSNQKFSEQNNSKQKFSEQSISKEKYSSFYWKGLVLIRLEAYERALEVFSR 1043

Query: 373  ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
            ++++  + V+    +GI+     ++  A   F+++L+ DP Y +     G +       E
Sbjct: 1044 LTENNPLFVEAWYLKGISHSKLKQHKEAAKDFEKVLELDPAYQDTCYQLGLSYFELGNFE 1103

Query: 433  AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
             AI  F  A++ +P   +A   R  A        E+     + L+  P+  + L      
Sbjct: 1104 EAIRVFESALKMDPENLDALYMRSLALLRSKRYGESASGFREVLKRNPSDTEALAHLSTA 1163

Query: 493  NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
            +FK   +  A+      +  + E K+     G+AL ++GE K+A       ++L  +   
Sbjct: 1164 SFKQGFYEEALGLFDQVLSKNPERKTVLFRKGVALKALGEVKRASTIFDSVLKLKPDCTY 1223

Query: 553  AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            A       + +L    +A+E  +  L   ++    Y+ RG+    LG  ++A++   + L
Sbjct: 1224 ALEQKAYTHFELEEYPEAVEAFKTALEYCQKKEDLYYYRGIAFFRLGNFEEAVRSFENAL 1283

Query: 613  GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
             +     E  Y     Y    EY +A++ ++A LD     +E    + LA ++ E
Sbjct: 1284 DLGCQQPEISYYTGIAYFENREYEKAVEIFNAILDSGALDLEILYKKALALFELE 1338



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 37/303 (12%)

Query: 382  DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
            D  +  G++Q+    Y +AI IF+++L+  P   +     G A     + E A+  F  A
Sbjct: 1546 DVWMKMGLSQLKLEHYEAAIEIFEKLLEVKPEASDLWYVAGLALRGLDQDEQAVEAFENA 1605

Query: 442  IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
            ++ +P+   AW++ G +   L    EA Q  S AL  +P++ + L+ R   +F+ + F  
Sbjct: 1606 VELDPALEAAWEQIGLSLLRLNMYEEASQAFSSALTLKPDNVNALYSRSEASFQLQHFEE 1665

Query: 502  AVEDLS--------------ACVKL-----------------------DKENKSAYTYLG 524
            A +DL               AC +L                       D  ++ A  Y G
Sbjct: 1666 AAQDLEKVLLSAPDFLNSIEACYRLGIARMELQECEKALEAFDIVLQQDPAHREALYYRG 1725

Query: 525  LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
            L L ++ EY+ A E     ++      E+  +L     +L + E AL+  ++    + + 
Sbjct: 1726 LVLFNLSEYEAAAETFGMLLEASPEDPESLNYLGLCLLELESPEAALKAFEKAALFNPKN 1785

Query: 585  SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
             +  +     L  L + +++I      L I P N++ L  +   +  +  YREA+K +D 
Sbjct: 1786 EETLYNAATTLIKLNRPQESIDYFDRILDISPENLDVLNYKGIAFCKLEMYREALKAFDL 1845

Query: 645  ALD 647
            AL+
Sbjct: 1846 ALE 1848



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 116/270 (42%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +G+  ++ GK+  A+   +++ +  P      + +G A       E A+ DF E ++ 
Sbjct: 451 LQQGLILLDNGKFEPALKALEKVAELKPDNDACWMNKGYALYSMDRYEEALEDFEEGLRL 510

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   + W  +G     LG + EA++   KA+   P+  D    RG++     D+  A E
Sbjct: 511 NPYLEKGWNNKGIVLGKLGRTEEALEAFEKAVSLRPDFEDAWKNRGLILLAVDDYEKASE 570

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +K + E+  +    G AL  +G+ + A E   K + L+ ++ +    L      L
Sbjct: 571 AFDEVLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLAVAQAKL 630

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+ALE  +++   +    K    +G     +G++  A++     L   P + E  Y 
Sbjct: 631 GKQEEALETFEKLAAKNPEDLKIQRRKGKFAMEIGKYDTALQAFDQVLSEKPESREAWYR 690

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSME 654
           +      +  + EAI  +D  +   L++ E
Sbjct: 691 KGLALIKLKRFEEAITAFDEVIVRNLNNKE 720



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 142/331 (42%), Gaps = 5/331 (1%)

Query: 318  LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
            LN     S+++S +      + ++  SRS+ SF+    +E + + +   K  ++      
Sbjct: 1626 LNMYEEASQAFSSALTLKPDNVNALYSRSEASFQLQHFEEAAQDLE---KVLLSAPDFLN 1682

Query: 378  SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
            SI   +RL  GIA++   +   A+  FD +L++DP + EAL  RG       E EAA   
Sbjct: 1683 SIEACYRL--GIARMELQECEKALEAFDIVLQQDPAHREALYYRGLVLFNLSEYEAAAET 1740

Query: 438  FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
            F   ++++P   E+    G     L     A++   KA  F P + + L+       K  
Sbjct: 1741 FGMLLEASPEDPESLNYLGLCLLELESPEAALKAFEKAALFNPKNEETLYNAATTLIKLN 1800

Query: 498  DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
                +++     + +  EN     Y G+A   +  Y++A +A   A++ D   ++A   +
Sbjct: 1801 RPQESIDYFDRILDISPENLDVLNYKGIAFCKLEMYREALKAFDLALEKDPENIKAIYSV 1860

Query: 558  TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                      E A     + L I+    ++    G+ L  + +++ A++     L I P 
Sbjct: 1861 GVVCFKQKMYETACRAFDEALAINPWHEQSLKYLGISLAKIEEYEDALRTFDRLLRIRPH 1920

Query: 618  NIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            +++ +  R      +G+Y EAI  ++  L L
Sbjct: 1921 DVQAMNYRGVILGKLGKYTEAINTFNEILRL 1951



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/350 (21%), Positives = 139/350 (39%), Gaps = 51/350 (14%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           + K+    +D   +RG A +  GK  +A+  F++IL  +P YP+ L     A+A   + E
Sbjct: 575 VLKTNPEDLDSIYNRGTALLKLGKTETALECFEKILSLNPDYPDLLYSLAVAQAKLGKQE 634

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            A+  F +    NP   +  +R+G+    +G+   A+Q   + L  +P S +  + +G+ 
Sbjct: 635 EALETFEKLAAKNPEDLKIQRRKGKFAMEIGKYDTALQAFDQVLSEKPESREAWYRKGLA 694

Query: 493 NFKFKDFNAAVEDLSACVKLDKENK----------------------------------- 517
             K K F  A+      +  +  NK                                   
Sbjct: 695 LIKLKRFEEAITAFDEVIVRNLNNKEISNSDYEELKNLDRDDIDNPARDETKRPDYEDEN 754

Query: 518 -----------SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
                      +A TY G A   +  Y  A +    A++   N    W +       +  
Sbjct: 755 PDYEDENSDYENARTYKGFAQMQLERYLPALKTFESALEEKPNSDILWYYRGLSLYRINM 814

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A    +  + ++    +A   R + L    Q+K A+K L + L  +P N+  L+ +A
Sbjct: 815 LEEAACAFESSVRLNPEMKEALEYRAICLFETEQYKAALKALEAVLEGNPENLSALHKKA 874

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSME-KFVLQCLAF----YQKEIALY 671
            C+  + +Y+   +     L+L+ ++ E KF L   +F    Y K ++L+
Sbjct: 875 ICFLQLKKYKSGAETLLRVLELDPNNKEVKFELGIASFESGEYNKALSLF 924



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 99/230 (43%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG+   N  +Y +A   F  +L+  P  PE+L   G         EAA+  F +A   NP
Sbjct: 1724 RGLVLFNLSEYEAAAETFGMLLEASPEDPESLNYLGLCLLELESPEAALKAFEKAALFNP 1783

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               E           L    E+I    + L+  P + D+L+ +GI   K + +  A++  
Sbjct: 1784 KNEETLYNAATTLIKLNRPQESIDYFDRILDISPENLDVLNYKGIAFCKLEMYREALKAF 1843

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               ++ D EN  A   +G+       Y+ A  A  +A+ ++    ++  +L      +  
Sbjct: 1844 DLALEKDPENIKAIYSVGVVCFKQKMYETACRAFDEALAINPWHEQSLKYLGISLAKIEE 1903

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
             E AL    ++L I     +A + RG++L  LG++ +AI   +  L + P
Sbjct: 1904 YEDALRTFDRLLRIRPHDVQAMNYRGVILGKLGKYTEAINTFNEILRLYP 1953



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 101/249 (40%), Gaps = 16/249 (6%)

Query: 382  DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
            D    RGIA    G +  A+  F+  L      PE     G A    RE E A+  F   
Sbjct: 1257 DLYYYRGIAFFRLGNFEEAVRSFENALDLGCQQPEISYYTGIAYFENREYEKAVEIFNAI 1316

Query: 442  IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN- 500
            + S     E   ++  A   L +  E +  +   LE E  + +I  + G    KF++ N 
Sbjct: 1317 LDSGALDLEILYKKALALFELEKPEEVVSTVYTLLELETENFNI-KDAG----KFEEENY 1371

Query: 501  ------AAVEDLSACVKLDKENKSAYTYL----GLALSSIGEYKKAEEAHLKAIQLDRNF 550
                   ++ + +A      EN  A+  L      +L  +G Y++A     K    +   
Sbjct: 1372 EESAGKESIGEENAGEIPAFENTKAFEELLEKFTFSLIQLGRYEEALLPLGKLTASESAS 1431

Query: 551  LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             EA       +Q+L  SE+ALE   ++ ++   F KA++ RGL+L  LG + +A+     
Sbjct: 1432 KEALYSKGIVFQELGRSEEALEIFSELRFLYPDFEKAWYRRGLILFSLGYYVEALDSFEQ 1491

Query: 611  GLGIDPSNI 619
                D + I
Sbjct: 1492 AALEDQTEI 1500



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 60/133 (45%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +GIA      Y  A+  FD  L++DP   +A+   G     Q+  E A   F EA+  NP
Sbjct: 1826 KGIAFCKLEMYREALKAFDLALEKDPENIKAIYSVGVVCFKQKMYETACRAFDEALAINP 1885

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               ++ K  G + A + E  +A++   + L   P+    ++ RG++  K   +  A+   
Sbjct: 1886 WHEQSLKYLGISLAKIEEYEDALRTFDRLLRIRPHDVQAMNYRGVILGKLGKYTEAINTF 1945

Query: 507  SACVKLDKENKSA 519
            +  ++L  E   A
Sbjct: 1946 NEILRLYPEMADA 1958



 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 44/99 (44%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            S G+    +  Y +A   FD+ L  +P + ++L   G + A   E E A+  F   ++  
Sbjct: 1859 SVGVVCFKQKMYETACRAFDEALAINPWHEQSLKYLGISLAKIEEYEDALRTFDRLLRIR 1918

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
            P   +A   RG     LG+  EAI   ++ L   P  AD
Sbjct: 1919 PHDVQAMNYRGVILGKLGKYTEAINTFNEILRLYPEMAD 1957


>gi|113478146|ref|YP_724207.1| TPR repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110169194|gb|ABG53734.1| serine/threonine protein kinase with TPR repeats [Trichodesmium
           erythraeum IMS101]
          Length = 746

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 114/227 (50%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG+A         AI+ + Q++K  P   +    RG AR F  + + ++ D+ + I+ 
Sbjct: 489 LGRGVAYAANNNLQKAIADYTQMIKIKPQKIDGYYRRGRARFFMGDYQGSLDDYNQVIKI 548

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   +A+ RR      L E  +A  D ++A++  P +    + R I     +++  A+ 
Sbjct: 549 NPKNEDAYARRCSTYLNLAEYEKAASDCTEAIKIRPKNEVAYNNRCIAYLNLQEYQKAIS 608

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++L+ +N   Y   GLA +   + +KA E + +AI L+ N  EA+ +    Y + 
Sbjct: 609 DCTKRIELEPQNAEGYINRGLAYTEDMQLQKAIEDYTQAIGLNPNKPEAYANRANVYNEQ 668

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            N ++A+    Q + ++  +++AY+ RGL+   +G  K AI DL + 
Sbjct: 669 KNYQQAIADYVQAIRLNPEYARAYYSRGLVRVNMGDIKGAISDLDTA 715



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/314 (25%), Positives = 149/314 (47%), Gaps = 9/314 (2%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            V+  ++  SI  +    +G  +  +G   +AI ++ + +K     PE   GRG A    
Sbjct: 335 VVSFFNRPNSIKAEKVFKQGEERARDGDIPAAILLYSKAIKGFEK-PEYFYGRGNAYYEL 393

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +  + AISD+T+AI  NPS   A+  RG          +AI D ++ L  +P  A+  ++
Sbjct: 394 KNYQNAISDYTKAILLNPSNVNAYFNRGVVYFEQQNYPKAINDFTQILRLQPEHAEAYYK 453

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAY-TYL--GLALSSIGEYKKAEEAHLKAIQ 545
           RG+V +K +D+  A++D +  + L      AY  YL  G+A ++    +KA   + + I+
Sbjct: 454 RGLVYYKSQDYLKAIQDYTQVIGLRPNTLDAYNAYLGRGVAYAANNNLQKAIADYTQMIK 513

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +    ++ +    +    + + + +L+   QV+ I+ +   AY  R      L +++KA 
Sbjct: 514 IKPQKIDGYYRRGRARFFMGDYQGSLDDYNQVIKINPKNEDAYARRCSTYLNLAEYEKAA 573

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-- 663
            D +  + I P N      R   Y  + EY++AI D    ++LE  + E ++ + LA+  
Sbjct: 574 SDCTEAIKIRPKNEVAYNNRCIAYLNLQEYQKAISDCTKRIELEPQNAEGYINRGLAYTE 633

Query: 664 ---YQKEIALYTAS 674
               QK I  YT +
Sbjct: 634 DMQLQKAIEDYTQA 647



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 143/309 (46%), Gaps = 9/309 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           ++   RG A      Y +AIS + + +  +P    A   RG     Q+    AI+DFT+ 
Sbjct: 381 EYFYGRGNAYYELKNYQNAISDYTKAILLNPSNVNAYFNRGVVYFEQQNYPKAINDFTQI 440

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE---RGIVNFKFKD 498
           ++  P   EA+ +RG       + ++AIQD ++ +   PN+ D  +    RG+      +
Sbjct: 441 LRLQPEHAEAYYKRGLVYYKSQDYLKAIQDYTQVIGLRPNTLDAYNAYLGRGVAYAANNN 500

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
              A+ D +  +K+  +    Y   G A   +G+Y+ + + + + I+++    +A+    
Sbjct: 501 LQKAIADYTQMIKIKPQKIDGYYRRGRARFFMGDYQGSLDDYNQVIKINPKNEDAYARRC 560

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
             Y +LA  EKA     + + I  +   AY+ R +    L +++KAI D +  + ++P N
Sbjct: 561 STYLNLAEYEKAASDCTEAIKIRPKNEVAYNNRCIAYLNLQEYQKAISDCTKRIELEPQN 620

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT- 672
            E    R   Y    + ++AI+DY  A+ L  +  E +  +   +     YQ+ IA Y  
Sbjct: 621 AEGYINRGLAYTEDMQLQKAIEDYTQAIGLNPNKPEAYANRANVYNEQKNYQQAIADYVQ 680

Query: 673 ASKINSEFC 681
           A ++N E+ 
Sbjct: 681 AIRLNPEYA 689



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 146/326 (44%), Gaps = 11/326 (3%)

Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR 387
           Y+K+ + +  + ++  +R  + F      E  N  K    F  T+I + +    +    R
Sbjct: 403 YTKAILLNPSNVNAYFNRGVVYF------EQQNYPKAINDF--TQILRLQPEHAEAYYKR 454

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEAL---IGRGTARAFQRELEAAISDFTEAIQS 444
           G+       Y  AI  + Q++   P   +A    +GRG A A    L+ AI+D+T+ I+ 
Sbjct: 455 GLVYYKSQDYLKAIQDYTQVIGLRPNTLDAYNAYLGRGVAYAANNNLQKAIADYTQMIKI 514

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   + + RRG+AR  +G+   ++ D ++ ++  P + D    R        ++  A  
Sbjct: 515 KPQKIDGYYRRGRARFFMGDYQGSLDDYNQVIKINPKNEDAYARRCSTYLNLAEYEKAAS 574

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  +K+  +N+ AY    +A  ++ EY+KA     K I+L+    E + +    Y + 
Sbjct: 575 DCTEAIKIRPKNEVAYNNRCIAYLNLQEYQKAISDCTKRIELEPQNAEGYINRGLAYTED 634

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              +KA+E   Q + ++    +AY  R  + +    +++AI D    + ++P      Y 
Sbjct: 635 MQLQKAIEDYTQAIGLNPNKPEAYANRANVYNEQKNYQQAIADYVQAIRLNPEYARAYYS 694

Query: 625 RASCYHAIGEYREAIKDYDAALDLEL 650
           R      +G+ + AI D D A  L L
Sbjct: 695 RGLVRVNMGDIKGAISDLDTAAQLYL 720


>gi|313203088|ref|YP_004041745.1| hypothetical protein Palpr_0604 [Paludibacter propionicigenes WB4]
 gi|312442404|gb|ADQ78760.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
           propionicigenes WB4]
          Length = 677

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 126/280 (45%), Gaps = 34/280 (12%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++K  P   E  + R  A+    + + A  D + AI+ NP   +A+  RG
Sbjct: 39  YVLSIQYFNQVIKIKPYLAEPYLNRAIAKIQLGDYQGADKDCSTAIEINPFLPQAYYARG 98

Query: 457 QARAALGESVEAIQDLSKALEFEPNSA--------------------------------- 483
            AR  +    EAI D SKALEF PNS                                  
Sbjct: 99  FARRKMNFDKEAIVDFSKALEFSPNSLYLIMNRLDARVNIKDYDGAMKDVEEYQKLSPKT 158

Query: 484 -DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
             IL+E+G +  + KD   A +     ++ D  N  A++   +    + +   A + + +
Sbjct: 159 HSILYEKGRIQLEQKDTLGAAKTFELFIQKDSANCLAWSSRAILRMQMNDLDGALKDYSE 218

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           AI+ +  ++  + +      +  N  +AL+     + +DK  + AY+ RGLL   LG + 
Sbjct: 219 AIKRNSTYVGDYINRGIINVERKNYNQALKDYDSAVKLDKSNALAYYNRGLLRANLGDNN 278

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
            A+ DL++ L +D +N E L  +A     IGEYR AIKDY
Sbjct: 279 NALTDLNTVLKLDSANTEALLRKAMLEQTIGEYRNAIKDY 318



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 34/223 (15%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R  A+VN   Y  A+   ++  K  P     L  +G  +  Q++   A   F   IQ 
Sbjct: 129 MNRLDARVNIKDYDGAMKDVEEYQKLSPKTHSILYEKGRIQLEQKDTLGAAKTFELFIQK 188

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           + +   AW  R   R  + +   A++D S+A++           RGI+N + K++N A++
Sbjct: 189 DSANCLAWSSRAILRMQMNDLDGALKDYSEAIKRNSTYVGDYINRGIINVERKNYNQALK 248

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D  + VKLDK N  AY   GL  +++G+                                
Sbjct: 249 DYDSAVKLDKSNALAYYNRGLLRANLGD-------------------------------- 276

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
             +  AL  L  VL +D   ++A   + +L   +G+++ AIKD
Sbjct: 277 --NNNALTDLNTVLKLDSANTEALLRKAMLEQTIGEYRNAIKD 317



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 88/196 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G  Q+ +     A   F+  +++D     A   R   R    +L+ A+ D++EAI+ N 
Sbjct: 165 KGRIQLEQKDTLGAAKTFELFIQKDSANCLAWSSRAILRMQMNDLDGALKDYSEAIKRNS 224

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +    +  RG          +A++D   A++ + ++A   + RG++     D N A+ DL
Sbjct: 225 TYVGDYINRGIINVERKNYNQALKDYDSAVKLDKSNALAYYNRGLLRANLGDNNNALTDL 284

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +KLD  N  A     +   +IGEY+ A + +   I     F+ A+  + +    L N
Sbjct: 285 NTVLKLDSANTEALLRKAMLEQTIGEYRNAIKDYKTIISRYNYFIPAYLGVAEAEAALGN 344

Query: 567 SEKALECLQQVLYIDK 582
            + A +  Q    I+K
Sbjct: 345 QKGAFQYRQLASNIEK 360



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 4/166 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SR I ++       A+  + + +K +  Y    I RG     ++    A+ D+  A++ +
Sbjct: 198 SRAILRMQMNDLDGALKDYSEAIKRNSTYVGDYINRGIINVERKNYNQALKDYDSAVKLD 257

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            S   A+  RG  RA LG++  A+ DL+  L+ +  + + L  + ++     ++  A++D
Sbjct: 258 KSNALAYYNRGLLRANLGDNNNALTDLNTVLKLDSANTEALLRKAMLEQTIGEYRNAIKD 317

Query: 506 LSACVKLDKENKSAYTYLGL--ALSSIGEYKKAEEAHLKAIQLDRN 549
               +   + N     YLG+  A +++G  K A +    A  +++N
Sbjct: 318 YKTIIS--RYNYFIPAYLGVAEAEAALGNQKGAFQYRQLASNIEKN 361



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 105/499 (21%), Positives = 191/499 (38%), Gaps = 75/499 (15%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +L+++S+AI+        S  + D  NR     + + +   ++D D A++LD +   AY 
Sbjct: 212 ALKDYSEAIK------RNSTYVGDYINRGIINVERKNYNQALKDYDSAVKLDKSNALAYY 265

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
            +G   + LG    AL+              DL   L+L+          S   E  +  
Sbjct: 266 NRGLLRANLGDNNNALT--------------DLNTVLKLD----------SANTEALLRK 301

Query: 168 SMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDE 227
           +M   T+ E              N  K      S  +  +      +  +  L N +   
Sbjct: 302 AMLEQTIGEY------------RNAIKDYKTIISRYNYFIPAYLGVAEAEAALGNQKGAF 349

Query: 228 AKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICNGP 287
                +  + K+  +IN K +E  +  N  ++ S+ +  SR     NR + D+       
Sbjct: 350 QYRQLASNIEKNKDYINRKNKENIQAKNKLAENSQKSSTSRKTELFNRFAVDN------N 403

Query: 288 IDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNK-----SSDST 342
            D      ++  +T G   V DK +     +N+       Y+K+  + +      + DS 
Sbjct: 404 ADNTDSESKYSTETRGA--VQDKYTD---VVNERGFVLSYYAKADETRHTNLYHPAIDSY 458

Query: 343 ESRSKLSFKWDMLKETSNEAKRNKKFC------VTRISK---SKSISVDFRLSRGIAQVN 393
             ++KLS    +LK T+NE     +        + ++S+   S + + D   SR +    
Sbjct: 459 NKKNKLS---SILKITNNELVLTAELIDMHFNIINQLSQKIASDANNADLYFSRSLEFTL 515

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
              Y SA+   +++L   P +  A   R   R    E    I +F     +NPS   + K
Sbjct: 516 VQDYKSALDDLNKVLLLRPDFMLAYFCRANVRNKSLEFNK-IQEFN----NNPSVDNSKK 570

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           +      ++ E+   ++D  KA+E  P+       R  V    KDF  A+ + +  +++D
Sbjct: 571 KTASDNQSVFETEMILRDYEKAIELNPDFDFAYFNRANVLCTQKDFQNAIANYTKSIEID 630

Query: 514 KENKSAYTYLGLALSSIGE 532
            +   AY   GL    IGE
Sbjct: 631 PDFAEAYFNRGLTYLFIGE 649



 Score = 46.2 bits (108), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 42/75 (56%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +++ ++ +P +  A   R      Q++ + AI+++T++I+ +P   EA+  RG     +G
Sbjct: 589 YEKAIELNPDFDFAYFNRANVLCTQKDFQNAIANYTKSIEIDPDFAEAYFNRGLTYLFIG 648

Query: 464 ESVEAIQDLSKALEF 478
           E  + + DLSKA E 
Sbjct: 649 EDTKGLSDLSKAGEL 663



 Score = 43.5 bits (101), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)

Query: 19  TICEIDELV-----RVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDIC 73
           TIC + +L+       D +MA    A      + S++ +++ I+I    LA+ Y      
Sbjct: 8   TICLLTQLLAMAQWNTDRIMAIGQNALYFEDYVLSIQYFNQVIKI-KPYLAEPY-----L 61

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
           NRA    QL  ++   +DC  A++++P L QAY  +G A   +   +EA+  + K  E +
Sbjct: 62  NRAIAKIQLGDYQGADKDCSTAIEINPFLPQAYYARGFARRKMNFDKEAIVDFSKALEFS 121



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 60/296 (20%), Positives = 108/296 (36%), Gaps = 36/296 (12%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I +  Q+L       + ++  G    +  +   +I  F + I+  P   E +  R  A+ 
Sbjct: 9   ICLLTQLLAMAQWNTDRIMAIGQNALYFEDYVLSIQYFNQVIKIKPYLAEPYLNRAIAKI 68

Query: 461 ALGESVEAIQDLSKA----------------------------------LEFEPNSADIL 486
            LG+   A +D S A                                  LEF PNS  ++
Sbjct: 69  QLGDYQGADKDCSTAIEINPFLPQAYYARGFARRKMNFDKEAIVDFSKALEFSPNSLYLI 128

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG-LALSSIGEYKKAEEAHLKAIQ 545
             R       KD++ A++D+    KL  +  S     G + L        A+   L  IQ
Sbjct: 129 MNRLDARVNIKDYDGAMKDVEEYQKLSPKTHSILYEKGRIQLEQKDTLGAAKTFEL-FIQ 187

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
            D     AW         + + + AL+   + +  +  +   Y  RG++      + +A+
Sbjct: 188 KDSANCLAWSSRAILRMQMNDLDGALKDYSEAIKRNSTYVGDYINRGIINVERKNYNQAL 247

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           KD  S + +D SN    Y R      +G+   A+ D +  L L+  + E  + + +
Sbjct: 248 KDYDSAVKLDKSNALAYYNRGLLRANLGDNNNALTDLNTVLKLDSANTEALLRKAM 303


>gi|307106595|gb|EFN54840.1| hypothetical protein CHLNCDRAFT_134871 [Chlorella variabilis]
          Length = 802

 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 134/304 (44%), Gaps = 34/304 (11%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           + DF  +RG +     +Y  A++ + + ++ +P + +A   R  A    R  + A +D++
Sbjct: 498 NADFYHNRGFSYRKMERYEDAVADYTRAVQFNPAHTKAYYNRAVALERLRRYQDAAADYS 557

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
             ++ +P    A + RG     LG   EA  DL  AL  +  +A   H RG V  +    
Sbjct: 558 LVLRLDPRNAPALQNRGTVWLRLGRLGEARADLDAALRLDSGAAASWHARGEVLERLGQV 617

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---------RNF 550
            AA+ DL    +LD  + +    LGLAL + G +++A     + +QL          R F
Sbjct: 618 QAALADLQRACELDPAHPAYLRSLGLALRNCGRHEQAVGVLGRVLQLQADDEAALQARGF 677

Query: 551 -----------------LEAWGHLT--QF------YQDLANSEKALECLQQVLYIDKRFS 585
                            L A GH T   F      +  L N  +A+    + + +D    
Sbjct: 678 CLRKAGSFAAAAEDYGRLIALGHATVRNFNSRAYCHASLGNYAQAVADYSEAIQLDPENV 737

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            A+  RG+     G H  A+ D ++ + +DP+N    Y RASC+ A+G+Y  A+ DY  A
Sbjct: 738 HAFFNRGISHEKRGSHAAAVDDFTACIRLDPTNAVAFYNRASCFDALGQYERAVGDYRRA 797

Query: 646 LDLE 649
           LD E
Sbjct: 798 LDAE 801



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 120/269 (44%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI +   G+YA+A++ F   +  +P   +    RG +       E A++D+T A+Q NP+
Sbjct: 472 GIVRDRLGQYAAAVAAFSAAIALEPRNADFYHNRGFSYRKMERYEDAVADYTRAVQFNPA 531

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +A+  R  A   L    +A  D S  L  +P +A  L  RG V  +      A  DL 
Sbjct: 532 HTKAYYNRAVALERLRRYQDAAADYSLVLRLDPRNAPALQNRGTVWLRLGRLGEARADLD 591

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
           A ++LD    +++   G  L  +G+ + A     +A +LD         L    ++    
Sbjct: 592 AALRLDSGAAASWHARGEVLERLGQVQAALADLQRACELDPAHPAYLRSLGLALRNCGRH 651

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+A+  L +VL +      A   RG  L   G    A +D    + +  + +     RA 
Sbjct: 652 EQAVGVLGRVLQLQADDEAALQARGFCLRKAGSFAAAAEDYGRLIALGHATVRNFNSRAY 711

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKF 656
           C+ ++G Y +A+ DY  A+ L+ +++  F
Sbjct: 712 CHASLGNYAQAVADYSEAIQLDPENVHAF 740



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 125/295 (42%), Gaps = 2/295 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           + D   +RG A   EG +  A+  +   L  DP + + L  R  +       +AA+ D+ 
Sbjct: 396 TADEHHARGYALRKEGDFEGAVREYSAALALDPAHFKCLFNRAFSLDKLGRYDAALRDYE 455

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            A+   P +  A    G  R  LG+   A+   S A+  EP +AD  H RG    K + +
Sbjct: 456 AALGLEPGSSYAHYNAGIVRDRLGQYAAAVAAFSAAIALEPRNADFYHNRGFSYRKMERY 515

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             AV D +  V+ +  +  AY    +AL  +  Y+ A   +   ++LD     A  +   
Sbjct: 516 EDAVADYTRAVQFNPAHTKAYYNRAVALERLRRYQDAAADYSLVLRLDPRNAPALQNRGT 575

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            +  L    +A   L   L +D   + ++H RG +L  LGQ + A+ DL     +DP++ 
Sbjct: 576 VWLRLGRLGEARADLDAALRLDSGAAASWHARGEVLERLGQVQAALADLQRACELDPAHP 635

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTAS 674
             L          G + +A+      L L+ D  ++  LQ   F  ++   + A+
Sbjct: 636 AYLRSLGLALRNCGRHEQAVGVLGRVLQLQAD--DEAALQARGFCLRKAGSFAAA 688



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 77/163 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S G+A  N G++  A+ +  ++L+       AL  RG          AA  D+   I   
Sbjct: 640 SLGLALRNCGRHEQAVGVLGRVLQLQADDEAALQARGFCLRKAGSFAAAAEDYGRLIALG 699

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +    +  R    A+LG   +A+ D S+A++ +P +      RGI + K     AAV+D
Sbjct: 700 HATVRNFNSRAYCHASLGNYAQAVADYSEAIQLDPENVHAFFNRGISHEKRGSHAAAVDD 759

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            +AC++LD  N  A+        ++G+Y++A   + +A+  ++
Sbjct: 760 FTACIRLDPTNAVAFYNRASCFDALGQYERAVGDYRRALDAEK 802



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 42/79 (53%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E AL     VL  +     A + RG +   LG  ++AI+D S  L +DP++ +  Y RA+
Sbjct: 85  ETALHDYGAVLRHEPGHVDAAYQRGAVCQQLGSTEQAIRDFSLVLRLDPNHAKAAYSRAA 144

Query: 628 CYHAIGEYREAIKDYDAAL 646
           C   +G Y EA  DY+ AL
Sbjct: 145 CNSLVGRYDEANADYEQAL 163


>gi|291569669|dbj|BAI91941.1| TPR domain protein [Arthrospira platensis NIES-39]
          Length = 636

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/345 (22%), Positives = 152/345 (44%), Gaps = 7/345 (2%)

Query: 356 KETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
           K  SN      +        S+ +  D  L +G A +NE +Y  AI+  D+ L+ +P   
Sbjct: 248 KSPSNHDNHELRLPPKHPHTSQPLIADDFLKKGEALINERQYKQAIASCDRALEINPDLD 307

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           EA   +G A    ++   A+  +   ++  P   +AW  RG     L    +A+   ++A
Sbjct: 308 EAWYQKGNALVQLKQYSEALECYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQA 367

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L+ +PN     H RG +  KF+ +  A+E     +KL+  +   +   G  LS +  Y++
Sbjct: 368 LKIQPNDYAAWHNRGALLRKFQKYEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQE 427

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A  ++ +AIQ++    + W +       +    +AL C +Q + ++ +  + +  +G +L
Sbjct: 428 AISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVL 487

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
             L +H++A+      + +   + E    R     A+ +Y +A+ ++D  + L+ D+ + 
Sbjct: 488 VKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQ- 546

Query: 656 FVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                 A+ Q+ I L    + +     FD    + P   E W  R
Sbjct: 547 ------AWCQRGICLEKLERHDDAIACFDTAIALKPDHAESWRHR 585



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 2/282 (0%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT-ARAF 427
           C  R  K +    D   +RG   V   +Y+ A+S ++Q LK  P    A   RG   R F
Sbjct: 329 CYDRTLKIQPKRSDAWYNRGNVLVRLKRYSQALSAYNQALKIQPNDYAAWHNRGALLRKF 388

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q+  E A+  +  AI+   +  E W  RG   + L    EAI    +A++  P   DI  
Sbjct: 389 QK-YEQALESYDRAIKLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 447

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG+       ++ A+      + L+ +    +   G  L  +  +++A   + +AI L 
Sbjct: 448 NRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRAISLK 507

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +  EAW    +    L   E+AL    +V+ +     +A+  RG+ L  L +H  AI  
Sbjct: 508 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDDAIAC 567

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             + + + P + E    R +    + +Y+EAI     A+ ++
Sbjct: 568 FDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQ 609



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 80/169 (47%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG+A  +  +Y+ A+S ++Q +  +   PE  I +G         E A+  +  A
Sbjct: 444 DIWANRGMALCHINQYSEALSCYEQAISLNSKEPELWISQGGVLVKLARHEEAVICYDRA 503

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I     + EAW  RG+   AL +  +A+ +  + +  +P++     +RGI   K +  + 
Sbjct: 504 ISLKSDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKLERHDD 563

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           A+      + L  ++  ++ + G  LS + +Y++A  +  KAI + +  
Sbjct: 564 AIACFDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKEL 612



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 80/199 (40%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG       +Y  AIS +D+ ++ +P   +    RG A     +   A+S + +AI  N
Sbjct: 414 NRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRGMALCHINQYSEALSCYEQAISLN 473

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               E W  +G     L    EA+    +A+  + +S +    RG +    K +  A+ +
Sbjct: 474 SKEPELWISQGGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALAN 533

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L  +   A+   G+ L  +  +  A      AI L  +  E+W H       L 
Sbjct: 534 WDRVIALQPDAYQAWCQRGICLEKLERHDDAIACFDTAIALKPDHAESWRHRGALLSRLK 593

Query: 566 NSEKALECLQQVLYIDKRF 584
             ++A+  L + + I K  
Sbjct: 594 KYQEAIASLGKAISIQKEL 612


>gi|223938532|ref|ZP_03630424.1| TPR repeat-containing protein [bacterium Ellin514]
 gi|223892794|gb|EEF59263.1| TPR repeat-containing protein [bacterium Ellin514]
          Length = 432

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 117/261 (44%), Gaps = 34/261 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +    +G   + I+  ++++   P Y EA    G A    +    AI+++T AIQ  
Sbjct: 100 ARALVYRLKGDVQNQINDLNEVIDLKPTYAEAHYQLGMAYVSLKNYSQAITNYTIAIQIK 159

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           PS G+ + RRG+A        +A++D ++AL   PN       RG +    KD+  A+ D
Sbjct: 160 PSEGDYYTRRGRAHWYNKAEQDALKDFAEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRD 219

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +    L+  N+ +Y Y G A    G Y+KA   +  AIQL                   
Sbjct: 220 FTKSTDLNPTNELSYEYRGWAYYKSGAYEKAISDYSSAIQL------------------- 260

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
                          +   S AY  RGL     G+ +KAI D S G+ ++P+N+  L+ R
Sbjct: 261 ---------------NPAESAAYGSRGLAYEKSGELEKAIADYSRGIKLNPTNVIALHAR 305

Query: 626 ASCYHAIGEYREAIKDYDAAL 646
           A+ YH  G++   I+DY  A+
Sbjct: 306 AAAYHKQGKFDRVIEDYREAI 326



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 34/262 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A   +G +  A++  D+++K DP  P +   R      + +++  I+D  E I   P
Sbjct: 67  RGWAFSRKGDFLHALADMDKLVKLDPSNPWSYAARALVYRLKGDVQNQINDLNEVIDLKP 126

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA  + G A  +L    +AI + + A++ +P+  D    RG  ++  K    A++D 
Sbjct: 127 TYAEAHYQLGMAYVSLKNYSQAITNYTIAIQIKPSEGDYYTRRGRAHWYNKAEQDALKDF 186

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++L+  ++ AY + G                                  Q Y D  +
Sbjct: 187 AEALRLNPNDEVAYAFRG----------------------------------QLYLDKKD 212

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              A+    +   ++     +Y  RG   +  G ++KAI D SS + ++P+       R 
Sbjct: 213 YPLAIRDFTKSTDLNPTNELSYEYRGWAYYKSGAYEKAISDYSSAIQLNPAESAAYGSRG 272

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
             Y   GE  +AI DY   + L
Sbjct: 273 LAYEKSGELEKAIADYSRGIKL 294



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 94/207 (45%)

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++ +P    A++ RG A +  G+ + A+ D+ K ++ +P++      R +V     D   
Sbjct: 54  LELDPQDSYAYRHRGWAFSRKGDFLHALADMDKLVKLDPSNPWSYAARALVYRLKGDVQN 113

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            + DL+  + L      A+  LG+A  S+  Y +A   +  AIQ+  +  + +    + +
Sbjct: 114 QINDLNEVIDLKPTYAEAHYQLGMAYVSLKNYSQAITNYTIAIQIKPSEGDYYTRRGRAH 173

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
                 + AL+   + L ++     AY  RG L      +  AI+D +    ++P+N   
Sbjct: 174 WYNKAEQDALKDFAEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRDFTKSTDLNPTNELS 233

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
              R   Y+  G Y +AI DY +A+ L
Sbjct: 234 YEYRGWAYYKSGAYEKAISDYSSAIQL 260



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 72/164 (43%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D+   RG A         A+  F + L+ +P    A   RG     +++   AI DFT++
Sbjct: 164 DYYTRRGRAHWYNKAEQDALKDFAEALRLNPNDEVAYAFRGQLYLDKKDYPLAIRDFTKS 223

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
              NP+   +++ RG A    G   +AI D S A++  P  +     RG+   K  +   
Sbjct: 224 TDLNPTNELSYEYRGWAYYKSGAYEKAISDYSSAIQLNPAESAAYGSRGLAYEKSGELEK 283

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           A+ D S  +KL+  N  A      A    G++ +  E + +AI+
Sbjct: 284 AIADYSRGIKLNPTNVIALHARAAAYHKQGKFDRVIEDYREAIK 327



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 81/167 (48%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           SAD +H+     +K  D++  +E  SA ++LD ++  AY + G A S  G++  A     
Sbjct: 26  SADNMHQAIEEAWKHHDYDLTIERCSAILELDPQDSYAYRHRGWAFSRKGDFLHALADMD 85

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           K ++LD +   ++      Y+   + +  +  L +V+ +   +++A++  G+    L  +
Sbjct: 86  KLVKLDPSNPWSYAARALVYRLKGDVQNQINDLNEVIDLKPTYAEAHYQLGMAYVSLKNY 145

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            +AI + +  + I PS  +    R   +      ++A+KD+  AL L
Sbjct: 146 SQAITNYTIAIQIKPSEGDYYTRRGRAHWYNKAEQDALKDFAEALRL 192


>gi|119492428|ref|ZP_01623749.1| serine/threonine kinase [Lyngbya sp. PCC 8106]
 gi|119453094|gb|EAW34263.1| serine/threonine kinase [Lyngbya sp. PCC 8106]
          Length = 724

 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 136/282 (48%), Gaps = 5/282 (1%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            +   ++   I      S+G+ ++ +G   +A+    Q +  +   PEA   RG A    
Sbjct: 323 LIKVFNRPDPIKAQVAFSQGVEKLEKGNPKAAVRTLTQAINYNSDNPEAYHQRGNAYYDL 382

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + AI D+T+AIQ NP+   A+  RG AR    +   AI D SK +E EP   D  ++
Sbjct: 383 EQYQNAIEDYTQAIQLNPNYTNAYFNRGLARYDAQDLSGAIADYSKVIELEPTDVDAYYK 442

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD- 547
           RG+ ++  +D+  A+ED S  +++  ++  AY   G+A  + G+ +     + +AI+LD 
Sbjct: 443 RGLAHYALEDYQKAIEDYSEVIRIQSDHPLAYRSRGIARVNSGDLQGGLADYTQAIRLDS 502

Query: 548 RNFLEAWGH-LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           +N L  +    T+F+  L + + AL    +V+ +    S  Y  R      L +H+ AI 
Sbjct: 503 KNILAYYDRGRTRFH--LGDYQGALADYDRVIELQPDNSFVYGNRCSTQINLSKHQAAID 560

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           D +  + ++P N      R   Y  I E  +A+ D   A++L
Sbjct: 561 DCTKAIQLEP-NAVAYNNRCVAYLNISELDKALADCTKAIEL 601



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 127/263 (48%), Gaps = 4/263 (1%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I +F+   + DP+  +    +G  +  +   +AA+   T+AI  N    EA+ +RG A  
Sbjct: 324 IKVFN---RPDPIKAQVAFSQGVEKLEKGNPKAAVRTLTQAINYNSDNPEAYHQRGNAYY 380

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            L +   AI+D ++A++  PN  +    RG+  +  +D + A+ D S  ++L+  +  AY
Sbjct: 381 DLEQYQNAIEDYTQAIQLNPNYTNAYFNRGLARYDAQDLSGAIADYSKVIELEPTDVDAY 440

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GLA  ++ +Y+KA E + + I++  +   A+        +  + +  L    Q + +
Sbjct: 441 YKRGLAHYALEDYQKAIEDYSEVIRIQSDHPLAYRSRGIARVNSGDLQGGLADYTQAIRL 500

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           D +   AY+ RG     LG ++ A+ D    + + P N      R S    + +++ AI 
Sbjct: 501 DSKNILAYYDRGRTRFHLGDYQGALADYDRVIELQPDNSFVYGNRCSTQINLSKHQAAID 560

Query: 641 DYDAALDLELDSMEKFVLQCLAF 663
           D   A+ LE +++  +  +C+A+
Sbjct: 561 DCTKAIQLEPNAV-AYNNRCVAY 582



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 126/281 (44%), Gaps = 35/281 (12%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +++ + +   VD    RG+A      Y  AI  + ++++    +P A   RG AR    +
Sbjct: 427 SKVIELEPTDVDAYYKRGLAHYALEDYQKAIEDYSEVIRIQSDHPLAYRSRGIARVNSGD 486

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           L+  ++D+T+AI+ +     A+  RG+ R  LG+   A+ D  + +E +P+++ +   R 
Sbjct: 487 LQGGLADYTQAIRLDSKNILAYYDRGRTRFHLGDYQGALADYDRVIELQPDNSFVYGNRC 546

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
                     AA++D +  ++L+  N  AY    +A  +I E  KA              
Sbjct: 547 STQINLSKHQAAIDDCTKAIQLEP-NAVAYNNRCVAYLNISELDKA-------------- 591

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
                        LA+  KA+E       +     KAY  RG++       + AI D + 
Sbjct: 592 -------------LADCTKAIE-------LTPTDHKAYSNRGMVQVAQQDFQAAIADYTK 631

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            + ++P++ +    RA+ Y+ + +Y +AI DY  A+ L+ D
Sbjct: 632 AIELNPNDAQSYSNRATTYYELQDYNQAIADYVQAIRLKPD 672



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALI--GRGTARAFQRELEAAISDFTEAIQSNPSA 448
           Q+N  K+ +AI   D   K   + P A+    R  A     EL+ A++D T+AI+  P+ 
Sbjct: 549 QINLSKHQAAI---DDCTKAIQLEPNAVAYNNRCVAYLNISELDKALADCTKAIELTPTD 605

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +A+  RG  + A  +   AI D +KA+E  PN A     R    ++ +D+N A+ D   
Sbjct: 606 HKAYSNRGMVQVAQQDFQAAIADYTKAIELNPNDAQSYSNRATTYYELQDYNQAIADYVQ 665

Query: 509 CVKLDKENKSAYTYLGLALSSIGE 532
            ++L  +  +AY   G+   ++G+
Sbjct: 666 AIRLKPDYPNAYYGRGIVRVALGD 689



 Score = 43.9 bits (102), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 49/103 (47%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N + A+  L Q +  +    +AYH RG   + L Q++ AI+D +  + ++P+     + 
Sbjct: 349 GNPKAAVRTLTQAINYNSDNPEAYHQRGNAYYDLEQYQNAIEDYTQAIQLNPNYTNAYFN 408

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           R    +   +   AI DY   ++LE   ++ +  + LA Y  E
Sbjct: 409 RGLARYDAQDLSGAIADYSKVIELEPTDVDAYYKRGLAHYALE 451


>gi|333987462|ref|YP_004520069.1| hypothetical protein MSWAN_1251 [Methanobacterium sp. SWAN-1]
 gi|333825606|gb|AEG18268.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 1161

 Score =  102 bits (255), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 143/311 (45%), Gaps = 37/311 (11%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+A  N  K   AI  +D  +K DP Y +AL  +GT      E + AI  F +A++ +P
Sbjct: 64  KGLALQNLKKIDEAIKCYDNAIKTDPNYSKALNNKGTLLTKISEYDKAIKCFDKALKIDP 123

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG---------------- 490
              E    +G A   LG   EAI+  +KA+ +EP +   L+ +G                
Sbjct: 124 DYAEVHNNKGLALGYLGRYEEAIKSFNKAINYEPKNIIFLYNKGELLRNLKRYEEAIESY 183

Query: 491 --IVNFKFKDFNAAVEDLSACVKLDKENKS-------------------AYTYLGLALSS 529
             I+N K   F+A +    +   L+K ++S                    Y+  GL+L +
Sbjct: 184 DRIINIKNDFFDAILNKGISLAHLEKYDESIEYFDKLIELNPNSPFIHIVYSNKGLSLGN 243

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +  Y++A +   K+I+L+    EAW +    ++ L   ++A+E  ++ L I    + +YH
Sbjct: 244 LERYEEAIKYLDKSIELNSENAEAWFNKGVIFETLGKYDEAIEYYEKALEIAPDLALSYH 303

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
               +L  LG++++AIK     + +D  N E  + +      +G + E+I  +D AL++ 
Sbjct: 304 RISEILRILGKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKALNIN 363

Query: 650 LDSMEKFVLQC 660
            +  + +  +C
Sbjct: 364 PNFSDAYSAKC 374



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 145/280 (51%), Gaps = 5/280 (1%)

Query: 375 KSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           + KSI++D     F  S+G++  + G++  +I+ FD+ L  +P + +A   +  +    R
Sbjct: 322 QDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKALNINPNFSDAYSAKCASLRNLR 381

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + E A++    AI+ NP++ E W  +G +   L    E+I+  ++A+      A   + +
Sbjct: 382 KNEDALNCINTAIEFNPNSPELWFNKGLSLIDLKRYEESIRCFNEAVTLNHKFALAYNSK 441

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G        FN A++  +  + +D   ++A+   G++  ++G+Y+KA E   +A++++  
Sbjct: 442 GFSLNHLDKFNEAIKCFNRALNIDSTLETAFNNKGISHLALGQYEKALECFNEALRINPY 501

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           F E + +      ++    + +EC  + L +++   +A++ +G  L  LG++ ++I   +
Sbjct: 502 FTEVYVNKGSALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGKYNESINCFN 561

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             + I+P+  E    +   +  +G++  AIK +D AL+L+
Sbjct: 562 QSIEINPNYGEVYNNKGVSFENLGKFNHAIKCFDKALELD 601



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 150/343 (43%), Gaps = 44/343 (12%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI---GRGTARAFQ 428
           RI   K+   D  L++GI+  +  KY  +I  FD++++ +P  P   I    +G +    
Sbjct: 185 RIINIKNDFFDAILNKGISLAHLEKYDESIEYFDKLIELNPNSPFIHIVYSNKGLSLGNL 244

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              E AI    ++I+ N    EAW  +G     LG+  EAI+   KALE  P+ A   H 
Sbjct: 245 ERYEEAIKYLDKSIELNSENAEAWFNKGVIFETLGKYDEAIEYYEKALEIAPDLALSYHR 304

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
              +      +  A++     + LD +N   +   GL+LS +G ++++     KA+ ++ 
Sbjct: 305 ISEILRILGKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKALNINP 364

Query: 549 NFLEA----------------------------------WGHLTQFYQDLANSEKALECL 574
           NF +A                                  W +      DL   E+++ C 
Sbjct: 365 NFSDAYSAKCASLRNLRKNEDALNCINTAIEFNPNSPELWFNKGLSLIDLKRYEESIRCF 424

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH-AIG 633
            + + ++ +F+ AY+ +G  L+ L +  +AIK  +  L ID S +E  +      H A+G
Sbjct: 425 NEAVTLNHKFALAYNSKGFSLNHLDKFNEAIKCFNRALNID-STLETAFNNKGISHLALG 483

Query: 634 EYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIALY 671
           +Y +A++ ++ AL +     E +V     L  +  Y +EI  Y
Sbjct: 484 QYEKALECFNEALRINPYFTEVYVNKGSALGNMEEYNEEIECY 526



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 124/254 (48%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  AI   D+ +  D    E    +G + +     E +I+ F +A+  NP+  +A+  
Sbjct: 313 GKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRFEESINPFDKALNINPNFSDAYSA 372

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +  +   L ++ +A+  ++ A+EF PNS ++   +G+     K +  ++   +  V L+ 
Sbjct: 373 KCASLRNLRKNEDALNCINTAIEFNPNSPELWFNKGLSLIDLKRYEESIRCFNEAVTLNH 432

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   AY   G +L+ + ++ +A +   +A+ +D     A+ +    +  L   EKALEC 
Sbjct: 433 KFALAYNSKGFSLNHLDKFNEAIKCFNRALNIDSTLETAFNNKGISHLALGQYEKALECF 492

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L I+  F++ Y  +G  L  + ++ + I+     L ++    E  Y + S    +G+
Sbjct: 493 NEALRINPYFTEVYVNKGSALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGK 552

Query: 635 YREAIKDYDAALDL 648
           Y E+I  ++ ++++
Sbjct: 553 YNESINCFNQSIEI 566



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 90/169 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI+ +  G+Y  A+  F++ L+ +P + E  + +G+A     E    I  + +A++ N
Sbjct: 474 NKGISHLALGQYEKALECFNEALRINPYFTEVYVNKGSALGNMEEYNEEIECYDKALELN 533

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EAW  +G A + LG+  E+I   ++++E  PN  ++ + +G+       FN A++ 
Sbjct: 534 QYIFEAWYNKGSALSNLGKYNESINCFNQSIEINPNYGEVYNNKGVSFENLGKFNHAIKC 593

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               ++LD      +   GL L+ IG+Y++  E+   A+++  +F EA+
Sbjct: 594 FDKALELDSTLFITHVNKGLVLAKIGKYERGIESCNNALKIQSDFAEAY 642



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 102/195 (52%), Gaps = 8/195 (4%)

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           KD+  A++     ++L ++ K A+ Y GLAL ++ +  +A + +  AI+ D N+ +A  +
Sbjct: 39  KDYKRAIDVFDKIIQLTQDPK-AWFYKGLALQNLKKIDEAIKCYDNAIKTDPNYSKALNN 97

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                  ++  +KA++C  + L ID  +++ ++ +GL L  LG++++AIK  +  +  +P
Sbjct: 98  KGTLLTKISEYDKAIKCFDKALKIDPDYAEVHNNKGLALGYLGRYEEAIKSFNKAINYEP 157

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKI 676
            NI  LY +      +  Y EAI+ YD  ++++ D  +       A   K I+L    K 
Sbjct: 158 KNIIFLYNKGELLRNLKRYEEAIESYDRIINIKNDFFD-------AILNKGISLAHLEKY 210

Query: 677 NSEFCWFDIDGDIDP 691
           +    +FD   +++P
Sbjct: 211 DESIEYFDKLIELNP 225



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/270 (18%), Positives = 129/270 (47%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C+    +    S +   ++G++ ++  +Y  +I  F++ +  +  +  A   +G +    
Sbjct: 389 CINTAIEFNPNSPELWFNKGLSLIDLKRYEESIRCFNEAVTLNHKFALAYNSKGFSLNHL 448

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            +   AI  F  A+  + +   A+  +G +  ALG+  +A++  ++AL   P   ++   
Sbjct: 449 DKFNEAIKCFNRALNIDSTLETAFNNKGISHLALGQYEKALECFNEALRINPYFTEVYVN 508

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G      +++N  +E     ++L++    A+   G ALS++G+Y ++     ++I+++ 
Sbjct: 509 KGSALGNMEEYNEEIECYDKALELNQYIFEAWYNKGSALSNLGKYNESINCFNQSIEINP 568

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N+ E + +    +++L     A++C  + L +D      +  +GL+L  +G++++ I+  
Sbjct: 569 NYGEVYNNKGVSFENLGKFNHAIKCFDKALELDSTLFITHVNKGLVLAKIGKYERGIESC 628

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREA 638
           ++ L I     E    +   +  + +Y +A
Sbjct: 629 NNALKIQSDFAEAYMGKGIIFLTLHKYNDA 658



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 145/314 (46%), Gaps = 10/314 (3%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           ++ F  ++G    N  +Y  AI  +D+I+     + +A++ +G + A   + + +I  F 
Sbjct: 159 NIIFLYNKGELLRNLKRYEEAIESYDRIINIKNDFFDAILNKGISLAHLEKYDESIEYFD 218

Query: 440 EAIQSNPSAGE---AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           + I+ NP++      +  +G +   L    EAI+ L K++E    +A+    +G++    
Sbjct: 219 KLIELNPNSPFIHIVYSNKGLSLGNLERYEEAIKYLDKSIELNSENAEAWFNKGVIFETL 278

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
             ++ A+E     +++  +   +Y  +   L  +G+Y++A +   K+I LD    E W  
Sbjct: 279 GKYDEAIEYYEKALEIAPDLALSYHRISEILRILGKYEEAIKYQDKSIALDSKNAEFWFS 338

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                 DL   E+++    + L I+  FS AY  +   L  L +++ A+  +++ +  +P
Sbjct: 339 KGLSLSDLGRFEESINPFDKALNINPNFSDAYSAKCASLRNLRKNEDALNCINTAIEFNP 398

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKI 676
           ++ E  + +      +  Y E+I+ ++ A+ L      KF    LA+  K  +L    K 
Sbjct: 399 NSPELWFNKGLSLIDLKRYEESIRCFNEAVTLN----HKF---ALAYNSKGFSLNHLDKF 451

Query: 677 NSEFCWFDIDGDID 690
           N     F+   +ID
Sbjct: 452 NEAIKCFNRALNID 465



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 70/303 (23%), Positives = 133/303 (43%), Gaps = 50/303 (16%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
            ++ + AI  F + IQ      +AW  +G A   L +  EAI+    A++ +PN +  L+
Sbjct: 38  NKDYKRAIDVFDKIIQLTQDP-KAWFYKGLALQNLKKIDEAIKCYDNAIKTDPNYSKALN 96

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G +  K  +++ A++     +K+D +    +   GLAL  +G Y++A ++  KAI  +
Sbjct: 97  NKGTLLTKISEYDKAIKCFDKALKIDPDYAEVHNNKGLALGYLGRYEEAIKSFNKAINYE 156

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA-------------------- 587
              +    +  +  ++L   E+A+E   +++ I   F  A                    
Sbjct: 157 PKNIIFLYNKGELLRNLKRYEEAIESYDRIINIKNDFFDAILNKGISLAHLEKYDESIEY 216

Query: 588 -----------------YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
                            Y  +GL L  L ++++AIK L   + ++  N E  + +   + 
Sbjct: 217 FDKLIELNPNSPFIHIVYSNKGLSLGNLERYEEAIKYLDKSIELNSENAEAWFNKGVIFE 276

Query: 631 AIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTASKI-----NSEF 680
            +G+Y EAI+ Y+ AL++  D    +     +L+ L  Y++ I  Y    I     N+EF
Sbjct: 277 TLGKYDEAIEYYEKALEIAPDLALSYHRISEILRILGKYEEAIK-YQDKSIALDSKNAEF 335

Query: 681 CWF 683
            WF
Sbjct: 336 -WF 337



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 20/196 (10%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITAR-IELAKLCSLRNWSKAIRILDSLL---AQSYE 68
           L +  + I   D ++ + +    AI  + I LA    L  + ++I   D L+     S  
Sbjct: 173 LKRYEEAIESYDRIINIKNDFFDAILNKGISLA---HLEKYDESIEYFDKLIELNPNSPF 229

Query: 69  IQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
           I  +  N+      LE ++  I+  DK+++L+    +A+  KG  F  LG+ +EA+  +E
Sbjct: 230 IHIVYSNKGLSLGNLERYEEAIKYLDKSIELNSENAEAWFNKGVIFETLGKYDEAIEYYE 289

Query: 128 KGYEHALHQSADLKQFLELEELLTAAK-----QDRSVTCE-------YDVSNSMSSLTVS 175
           K  E A   +    +  E+  +L   +     QD+S+  +       +    S+S L   
Sbjct: 290 KALEIAPDLALSYHRISEILRILGKYEEAIKYQDKSIALDSKNAEFWFSKGLSLSDLGRF 349

Query: 176 ESGLNANDKMSETSEN 191
           E  +N  DK    + N
Sbjct: 350 EESINPFDKALNINPN 365


>gi|428313677|ref|YP_007124654.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
 gi|428255289|gb|AFZ21248.1| hypothetical protein Mic7113_5616 [Microcoleus sp. PCC 7113]
          Length = 1041

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 9/314 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ Q   G Y  A+S FD+ L  +P    A I RG A    +  E AI     AI+ NP+
Sbjct: 11  GLQQFQAGDYQGAMSSFDEALAINPNNHHAWIYRGVALIQLKRYEEAIFSLESAIKINPN 70

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDL 506
              AW  R  A  +LG   EA+   ++ALE +P+   +   RG I+   F  +  A+   
Sbjct: 71  NHHAWCNRSSALQSLGLYQEALTSSNRALELDPDCPTLWKIRGCILANAFGHYEEALNCF 130

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +  +  +   +   G  LS +  +++A +++ +A+ ++ N  + W       Q+L  
Sbjct: 131 NCFLVFNANDSEVWRNHGTVLSHLERHEEALDSYSRALAINPNEYKTWRDQGALLQELNF 190

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+      L ++    K ++ +G LL  L ++K+AI      L I+P+  E    R 
Sbjct: 191 YEEAIASYDNALALNSDDYKLWNNQGFLLMRLERYKEAISSYDHALLINPNVSEVWSNRG 250

Query: 627 SCYHAIGEYREAIKDYDAALDL-----ELDSMEKFVLQCLAFYQKEIALYTASKI---NS 678
                +G Y EAI  YD AL +     E+ S   F L  L  Y++ ++ +  + +   N 
Sbjct: 251 FALWKLGRYEEAISSYDYALSINPNVSEVWSNRGFALWKLGRYEEAVSSFDHALLINPND 310

Query: 679 EFCWFDIDGDIDPL 692
              W +    +D L
Sbjct: 311 SLVWSNRGSALDDL 324



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 124/285 (43%), Gaps = 6/285 (2%)

Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           D++L  ++G   +   +Y  AIS +D  L  +P   E    RG A       E AIS + 
Sbjct: 208 DYKLWNNQGFLLMRLERYKEAISSYDHALLINPNVSEVWSNRGFALWKLGRYEEAISSYD 267

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            A+  NP+  E W  RG A   LG   EA+     AL   PN + +   RG        +
Sbjct: 268 YALSINPNVSEVWSNRGFALWKLGRYEEAVSSFDHALLINPNDSLVWSNRGSALDDLNRY 327

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+      + LD EN SA+   G AL  + +Y++A  +  +A+ L+ N  E W +   
Sbjct: 328 EEAISSWDRALSLDPENTSAWYGRGNALEDLEQYEEAIASWDRALTLNPNLPECWTNRGV 387

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHL---RGLLLHGLGQHKKAIKDLSSGLGIDP 616
             + L   E+A+      L  +  F +AY+    RG  L  L ++++AI  L   L +  
Sbjct: 388 LLRKLGRYEEAIASFDHALSQNPNFPEAYNAWNSRGGSLADLERYEEAIPCLDRALCLTN 447

Query: 617 SNIECLYL-RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
           + +   +L R   +  +  Y  A+++Y+  L      M  +   C
Sbjct: 448 NQMWSAWLNRGMAFFNLHSYEAALQNYNEGLQFLQPKMPGYQEGC 492



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 122/289 (42%), Gaps = 6/289 (2%)

Query: 387 RGIAQVNE-GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           RG    N  G Y  A++ F+  L  +    E     GT  +     E A+  ++ A+  N
Sbjct: 112 RGCILANAFGHYEEALNCFNCFLVFNANDSEVWRNHGTVLSHLERHEEALDSYSRALAIN 171

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  + W+ +G     L    EAI     AL    +   + + +G +  + + +  A+  
Sbjct: 172 PNEYKTWRDQGALLQELNFYEEAIASYDNALALNSDDYKLWNNQGFLLMRLERYKEAISS 231

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + ++      ++  G AL  +G Y++A  ++  A+ ++ N  E W +       L 
Sbjct: 232 YDHALLINPNVSEVWSNRGFALWKLGRYEEAISSYDYALSINPNVSEVWSNRGFALWKLG 291

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+      L I+   S  +  RG  L  L ++++AI      L +DP N    Y R
Sbjct: 292 RYEEAVSSFDHALLINPNDSLVWSNRGSALDDLNRYEEAISSWDRALSLDPENTSAWYGR 351

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSME-----KFVLQCLAFYQKEIA 669
            +    + +Y EAI  +D AL L  +  E       +L+ L  Y++ IA
Sbjct: 352 GNALEDLEQYEEAIASWDRALTLNPNLPECWTNRGVLLRKLGRYEEAIA 400



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 94/215 (43%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI+ +  A+  N    + W  +G     L    EAI     AL   PN +++   RG 
Sbjct: 192 EEAIASYDNALALNSDDYKLWNNQGFLLMRLERYKEAISSYDHALLINPNVSEVWSNRGF 251

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             +K   +  A+      + ++      ++  G AL  +G Y++A  +   A+ ++ N  
Sbjct: 252 ALWKLGRYEEAISSYDYALSINPNVSEVWSNRGFALWKLGRYEEAVSSFDHALLINPNDS 311

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
             W +      DL   E+A+    + L +D   + A++ RG  L  L Q+++AI      
Sbjct: 312 LVWSNRGSALDDLNRYEEAISSWDRALSLDPENTSAWYGRGNALEDLEQYEEAIASWDRA 371

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           L ++P+  EC   R      +G Y EAI  +D AL
Sbjct: 372 LTLNPNLPECWTNRGVLLRKLGRYEEAIASFDHAL 406



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 111/255 (43%), Gaps = 18/255 (7%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W   G  +   G+   A+    +AL   PN+      RG+   + K +  A+  L + +K
Sbjct: 7   WFNLGLQQFQAGDYQGAMSSFDEALAINPNNHHAWIYRGVALIQLKRYEEAIFSLESAIK 66

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD-LANSEKA 570
           ++  N  A+     AL S+G Y++A  +  +A++LD +    W        +   + E+A
Sbjct: 67  INPNNHHAWCNRSSALQSLGLYQEALTSSNRALELDPDCPTLWKIRGCILANAFGHYEEA 126

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           L C    L  +   S+ +   G +L  L +H++A+   S  L I+P+  +    + +   
Sbjct: 127 LNCFNCFLVFNANDSEVWRNHGTVLSHLERHEEALDSYSRALAINPNEYKTWRDQGALLQ 186

Query: 631 AIGEYREAIKDYDAAL-----DLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            +  Y EAI  YD AL     D +L + + F+L  L  Y++ I+ Y  + +         
Sbjct: 187 ELNFYEEAIASYDNALALNSDDYKLWNNQGFLLMRLERYKEAISSYDHALL--------- 237

Query: 686 DGDIDPLFKEYWCKR 700
              I+P   E W  R
Sbjct: 238 ---INPNVSEVWSNR 249



 Score = 40.0 bits (92), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 9/100 (9%)

Query: 38  TARIELAKLCSLRNWSKAIRILDSLLAQS---YEIQDICNRAFCYSQLELHKHVIRDCDK 94
           T R + A L  L  + +AI   D+ LA +   Y++ +  N+ F   +LE +K  I   D 
Sbjct: 177 TWRDQGALLQELNFYEEAIASYDNALALNSDDYKLWN--NQGFLLMRLERYKEAISSYDH 234

Query: 95  ALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL 134
           AL ++P + + +  +G A   LGR EEA+S     Y++AL
Sbjct: 235 ALLINPNVSEVWSNRGFALWKLGRYEEAIS----SYDYAL 270


>gi|334118605|ref|ZP_08492694.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333459612|gb|EGK88225.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 560

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 3/262 (1%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           +AI+ FD+ +K +  YPEA IGRG   +  R+ E AI+ F +A+Q NP+  EAW  RG A
Sbjct: 284 AAIACFDRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQINPNFPEAWLGRGIA 343

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE--- 515
            A L    EAI   S AL+ E N  +  + RG    K + +  A+      + L  E   
Sbjct: 344 LAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEI 403

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
                   G AL  +  Y++A  A+ + +++  +  EAW         L   E+AL    
Sbjct: 404 TSKVGLQQGAALEKLQRYEEAVAAYNRVLKIVPDNFEAWLKRGNALSKLQQYEQALASYD 463

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + +     + +  RGL+L  +  + +A+      + + P N E    R      +   
Sbjct: 464 RAITVWPDNYQGWVQRGLILGEMQNYSQALVAFDQVIQLKPDNWEAWAQRGDVLQKLQRT 523

Query: 636 REAIKDYDAALDLELDSMEKFV 657
           ++AI  Y  AL+++ D  E  V
Sbjct: 524 QDAISSYGVALEIKPDYYEALV 545



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 33/297 (11%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG   ++   ++ AI+ FD  ++ +    EA   RG      ++ EAA S + +A Q 
Sbjct: 101 MLRGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWEAAASCYKKATQL 160

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+    W R+G          EA+    +AL+  P + +    RG+   K + +  AV 
Sbjct: 161 HPNLPAMWYRQGNVLVQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAERYAEAVT 220

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------- 556
                ++L  +N  A+   G+A + + +Y +A  A+ + +Q+  N  EAW +        
Sbjct: 221 SYDRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAWFYKGMALKHQ 280

Query: 557 --------------LTQFY--------QDLANS---EKALECLQQVLYIDKRFSKAYHLR 591
                         +  FY        Q L+ S   E A+    Q + I+  F +A+  R
Sbjct: 281 WADAAIACFDRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQINPNFPEAWLGR 340

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           G+ L GL ++K+AI   S+ L I+ + +E   LR      + +Y EAI  +D  + L
Sbjct: 341 GIALAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISL 397



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 3/260 (1%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R  K  S   +  + RG        +  AI+ FDQ ++ +P +PEA +GRG A A  
Sbjct: 288 CFDRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQINPNFPEAWLGRGIALAGL 347

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN---SADI 485
              + AI  ++ A+Q   +  EAW  RG+A   L +  EAI    K +        ++ +
Sbjct: 348 ERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIACFDKVISLTSEAEITSKV 407

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
             ++G    K + +  AV   +  +K+  +N  A+   G ALS + +Y++A  ++ +AI 
Sbjct: 408 GLQQGAALEKLQRYEEAVAAYNRVLKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAIT 467

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +  +  + W        ++ N  +AL    QV+ +     +A+  RG +L  L + + AI
Sbjct: 468 VWPDNYQGWVQRGLILGEMQNYSQALVAFDQVIQLKPDNWEAWAQRGDVLQKLQRTQDAI 527

Query: 606 KDLSSGLGIDPSNIECLYLR 625
                 L I P   E L  R
Sbjct: 528 SSYGVALEIKPDYYEALVSR 547



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/269 (21%), Positives = 104/269 (38%), Gaps = 8/269 (2%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           EAA+  + +A+Q  P    AW   G+A   L    E +    +A    P        RG 
Sbjct: 46  EAAVICYGKAVQIKPDWARAWLNLGKAYKQLHSYAETVACADRATAINPEEYWAWMLRGT 105

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                ++ + A+      ++++ E   A+   G  L  + +++ A   + KA QL  N  
Sbjct: 106 GLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWEAAASCYKKATQLHPNLP 165

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
             W              +A+   ++ L +     +A+  RGL L    ++ +A+      
Sbjct: 166 AMWYRQGNVLVQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAERYAEAVTSYDRA 225

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           + + P N    + R      + +Y EA+  YD  L ++ +        C A++ K +AL 
Sbjct: 226 IQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPND-------CEAWFYKGMALK 278

Query: 672 TASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                 +  C FD    I+  + E W  R
Sbjct: 279 HQWADAAIAC-FDRAIKINSFYPEAWIGR 306



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 78/362 (21%), Positives = 128/362 (35%), Gaps = 82/362 (22%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG      G+Y +A+  + + ++  P +  A +  G A          ++    A   NP
Sbjct: 35  RGNRLYAAGRYEAAVICYGKAVQIKPDWARAWLNLGKAYKQLHSYAETVACADRATAINP 94

Query: 447 SAGEAWKRRGQARAALGESVEAIQDL---------------------------------- 472
               AW  RG    +L    EAI                                     
Sbjct: 95  EEYWAWMLRGTGLLSLQNHSEAIAAFDTAIQINSEKHEAWYQRGRVLEELQQWEAAASCY 154

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            KA +  PN   + + +G V  + + +  AV      +KL   N  A+   GLAL     
Sbjct: 155 KKATQLHPNLPAMWYRQGNVLVQAERYPEAVAAFERALKLVPTNWEAWLNRGLALMKAER 214

Query: 533 YKKAEEAHLKAIQL----------------------------DR------NFLEAWGHLT 558
           Y +A  ++ +AIQL                            DR      N  EAW    
Sbjct: 215 YAEAVTSYDRAIQLQPQNSLAWFNRGIASAKLHKYAEAVTAYDRVLQMQPNDCEAW---- 270

Query: 559 QFYQDLA----NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            FY+ +A     ++ A+ C  + + I+  + +A+  RG  L      + AI      + I
Sbjct: 271 -FYKGMALKHQWADAAIACFDRAIKINSFYPEAWIGRGQTLSESRDFEGAIAAFDQAVQI 329

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIA 669
           +P+  E    R      +  Y+EAI  Y  AL +E + +E +      L+ L  Y++ IA
Sbjct: 330 NPNFPEAWLGRGIALAGLERYKEAIIAYSNALQIEGNFLEAWNLRGEALEKLQQYEEAIA 389

Query: 670 LY 671
            +
Sbjct: 390 CF 391



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 53/124 (42%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R+ K    + +  L RG A     +Y  A++ +D+ +   P   +  + RG      +  
Sbjct: 430 RVLKIVPDNFEAWLKRGNALSKLQQYEQALASYDRAITVWPDNYQGWVQRGLILGEMQNY 489

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             A+  F + IQ  P   EAW +RG     L  + +AI     ALE +P+  + L  R  
Sbjct: 490 SQALVAFDQVIQLKPDNWEAWAQRGDVLQKLQRTQDAISSYGVALEIKPDYYEALVSREE 549

Query: 492 VNFK 495
           +  K
Sbjct: 550 LRLK 553


>gi|254414040|ref|ZP_05027808.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196179176|gb|EDX74172.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 481

 Score =  102 bits (255), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 140/285 (49%), Gaps = 9/285 (3%)

Query: 293 VNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSK-LSFK 351
           V +R GR   G H   D+ + D+        + + Y+   +S     ++     K L+ +
Sbjct: 172 VFDREGRVI-GIHGQGDREAYDA-------IDHQGYTTGQVSVRTGFNAAIPIQKFLAMR 223

Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKED 411
             + +  +N    N     + +S +++        RG++  + G++  +I+ FDQ +++ 
Sbjct: 224 SQIGQSVANIKVDNTPIATSSVSPTRTNDAQSDYVRGLSHFDMGEWLKSIADFDQAIQKQ 283

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P Y EA   RG AR  Q +L  +I+D+++AI+ N S  +A+  R   R+  G+   AI D
Sbjct: 284 PNYTEAYFYRGLARLQQGDLPGSIADYSQAIRLNSSYADAYYNRAVVRSQSGDQAGAIAD 343

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            ++A+  + + A   + RG+     +D   A+ED S  ++++    + Y   GLA S + 
Sbjct: 344 YTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALRINPGKANTYYNRGLAYSRLR 403

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
           + ++A   + +AI+L+ N+ +A+G+    +  L     A+  LQQ
Sbjct: 404 DDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHSAIADLQQ 448



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 11/191 (5%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ +G    +I+ + Q ++ +  Y +A   R   R+   +   AI+D+T+AI+ + 
Sbjct: 293 RGLARLQQGDLPGSIADYSQAIRLNSSYADAYYNRAVVRSQSGDQAGAIADYTQAIRIDS 352

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S   A+  RG AR+ L +   AI+D S+AL   P  A+  + RG+   + +D   A+ D 
Sbjct: 353 SFAAAYNNRGLARSDLEDQQGAIEDFSQALRINPGKANTYYNRGLAYSRLRDDRRAIADY 412

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++L+     AY   GLA + +GE   A     +A QL R    A G +  ++     
Sbjct: 413 TEAIRLNSNYAKAYGNRGLAFARLGELHSAIADLQQAAQLFR----AQGRMEDYH----- 463

Query: 567 SEKALECLQQV 577
             KAL+ ++Q+
Sbjct: 464 --KALDRIRQI 472



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 89/175 (50%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           +I+DF +AIQ  P+  EA+  RG AR   G+   +I D S+A+    + AD  + R +V 
Sbjct: 272 SIADFDQAIQKQPNYTEAYFYRGLARLQQGDLPGSIADYSQAIRLNSSYADAYYNRAVVR 331

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  D   A+ D +  +++D    +AY   GLA S + + + A E   +A++++      
Sbjct: 332 SQSGDQAGAIADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALRINPGKANT 391

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           + +    Y  L +  +A+    + + ++  ++KAY  RGL    LG+   AI DL
Sbjct: 392 YYNRGLAYSRLRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHSAIADL 446



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 90/194 (46%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG +   +GE +++I D  +A++ +PN  +    RG+   +  D   ++ D S  ++L+ 
Sbjct: 259 RGLSHFDMGEWLKSIADFDQAIQKQPNYTEAYFYRGLARLQQGDLPGSIADYSQAIRLNS 318

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
               AY    +  S  G+   A   + +AI++D +F  A+ +      DL + + A+E  
Sbjct: 319 SYADAYYNRAVVRSQSGDQAGAIADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDF 378

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q L I+   +  Y+ RGL    L   ++AI D +  + ++ +  +    R   +  +GE
Sbjct: 379 SQALRINPGKANTYYNRGLAYSRLRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGE 438

Query: 635 YREAIKDYDAALDL 648
              AI D   A  L
Sbjct: 439 LHSAIADLQQAAQL 452



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 6/211 (2%)

Query: 459 RAALGESVEAIQ------DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
           R+ +G+SV  I+        S       N A   + RG+ +F   ++  ++ D    ++ 
Sbjct: 223 RSQIGQSVANIKVDNTPIATSSVSPTRTNDAQSDYVRGLSHFDMGEWLKSIADFDQAIQK 282

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
                 AY Y GLA    G+   +   + +AI+L+ ++ +A+ +         +   A+ 
Sbjct: 283 QPNYTEAYFYRGLARLQQGDLPGSIADYSQAIRLNSSYADAYYNRAVVRSQSGDQAGAIA 342

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              Q + ID  F+ AY+ RGL    L   + AI+D S  L I+P      Y R   Y  +
Sbjct: 343 DYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALRINPGKANTYYNRGLAYSRL 402

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            + R AI DY  A+ L  +  + +  + LAF
Sbjct: 403 RDDRRAIADYTEAIRLNSNYAKAYGNRGLAF 433



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +R + +   G  A AI+ + Q ++ D  +  A   RG AR+   + + AI DF++A
Sbjct: 322 DAYYNRAVVRSQSGDQAGAIADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQA 381

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++ NP     +  RG A + L +   AI D ++A+    N A     RG+   +  + ++
Sbjct: 382 LRINPGKANTYYNRGLAYSRLRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHS 441

Query: 502 AVEDLSACVKL 512
           A+ DL    +L
Sbjct: 442 AIADLQQAAQL 452



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 11/110 (10%)

Query: 20  ICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLLAQSYEIQDICN 74
           I +  + +R+DS  A+A      AR +L  +  ++ ++S+A+RI +   A +Y      N
Sbjct: 341 IADYTQAIRIDSSFAAAYNNRGLARSDLEDQQGAIEDFSQALRI-NPGKANTY-----YN 394

Query: 75  RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
           R   YS+L   +  I D  +A++L+    +AY  +G AF+ LG    A++
Sbjct: 395 RGLAYSRLRDDRRAIADYTEAIRLNSNYAKAYGNRGLAFARLGELHSAIA 444


>gi|384207733|ref|YP_005593453.1| hypothetical protein Bint_0239 [Brachyspira intermedia PWS/A]
 gi|343385383|gb|AEM20873.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 392

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 130/265 (49%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           NE  Y SA+  +   +K +  +  A   RG         E A+ DF + I+ N +  EA+
Sbjct: 55  NEDSYKSAVEDYTWTIKLNDKFAAAYYNRGIINRSLGNSEEALKDFDKTIELNYNLEEAY 114

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             R   +A+L +   +I+D +KA+E  P+ AD  + R +      ++  A++D    ++ 
Sbjct: 115 YVRANTKASLKDYKGSIEDYNKAIEVYPHFADAYYNRALSKNALSEYKEAIKDYDKAIEY 174

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           +     AY   G     +G + +A + +  AI ++R F + + +       + + + A+E
Sbjct: 175 NSHFIDAYNNRGNVKEKLGNFNEAIDDYTNAIHINREFADGYFNRANAKFHIKDYKGAVE 234

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              +++ I+ +++KAY  RG++   +G +++AIKD    + +D +  +  Y +A   + +
Sbjct: 235 DFDELIKINPKYTKAYLNRGIIAMTMGAYQEAIKDFDKAIELDSNIADAYYNKAVALNHL 294

Query: 633 GEYREAIKDYDAALDLELDSMEKFV 657
           G Y EAI  YD A+ L  +  E + 
Sbjct: 295 GIYDEAILYYDQAIKLNPNYSESYF 319



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 134/304 (44%), Gaps = 44/304 (14%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARA--------------------------------- 460
           AI  F+E I+ + +  EA+  R  A+A                                 
Sbjct: 25  AIEYFSEVIKLDSTIYEAYYNRANAKANINNEDSYKSAVEDYTWTIKLNDKFAAAYYNRG 84

Query: 461 ----ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
               +LG S EA++D  K +E   N  +  + R       KD+  ++ED +  +++    
Sbjct: 85  IINRSLGNSEEALKDFDKTIELNYNLEEAYYVRANTKASLKDYKGSIEDYNKAIEVYPHF 144

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY    L+ +++ EYK+A + + KAI+ + +F++A+ +     + L N  +A++    
Sbjct: 145 ADAYYNRALSKNALSEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDDYTN 204

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            ++I++ F+  Y  R      +  +K A++D    + I+P   +    R      +G Y+
Sbjct: 205 AIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTMGAYQ 264

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEY 696
           EAIKD+D A++L+ +  +       A+Y K +AL      +    ++D    ++P + E 
Sbjct: 265 EAIKDFDKAIELDSNIAD-------AYYNKAVALNHLGIYDEAILYYDQAIKLNPNYSES 317

Query: 697 WCKR 700
           +  R
Sbjct: 318 YFNR 321



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 9/197 (4%)

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE---YKKAEEAHLKAIQLDRNF 550
           FK K++  A+E  S  +KLD     AY     A ++I     YK A E +   I+L+  F
Sbjct: 17  FKSKNYKLAIEYFSEVIKLDSTIYEAYYNRANAKANINNEDSYKSAVEDYTWTIKLNDKF 76

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +     + L NSE+AL+   + + ++    +AY++R      L  +K +I+D + 
Sbjct: 77  AAAYYNRGIINRSLGNSEEALKDFDKTIELNYNLEEAYYVRANTKASLKDYKGSIEDYNK 136

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQ 665
            + + P   +  Y RA   +A+ EY+EAIKDYD A++     ++ +     V + L  + 
Sbjct: 137 AIEVYPHFADAYYNRALSKNALSEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFN 196

Query: 666 KEIALYT-ASKINSEFC 681
           + I  YT A  IN EF 
Sbjct: 197 EAIDDYTNAIHINREFA 213


>gi|20090223|ref|NP_616298.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
 gi|19915215|gb|AAM04778.1| O-linked GlcNAc transferase [Methanosarcina acetivorans C2A]
          Length = 400

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 114/227 (50%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  A+  ++++L+E P Y EA  G+G A       + AI  + +AI+ +P   EAW  
Sbjct: 169 GSYEEAVEAYEKVLEESPDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLEAWYY 228

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G    +LG   +A++   KA+E +P + D  +  GI     + +  A+      + ++ 
Sbjct: 229 KGVDLDSLGSHRQALKAYEKAVELDPENDDAWNNMGIDLENLEKYEEAINAFDKAIAINS 288

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           EN   +   G  LS +  +++A EA+ KA QLD  +LEA+  L      L N E+ALE  
Sbjct: 289 ENSDVWYNKGFTLSQMHRFEEAVEAYRKATQLDPEYLEAYTSLGFVLAQLKNFEEALETY 348

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           ++ L +D+  + ++  + + L  LG+ ++A       + IDP   E 
Sbjct: 349 EKALELDQGAADSWFGKAVCLSFLGREEEAEDAYRKAVEIDPRYAEI 395



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 138/290 (47%), Gaps = 7/290 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNP 446
           G+  +  GK+  AI  FD+ +++DP     L  +  A  +F R  E A+  + +A++ N 
Sbjct: 60  GLDLLKLGKFNEAIIAFDKAIEKDPKNIYLLNNKAAALESFGR-FEEALKLYQKAVEINS 118

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              + W     + + +GE   A++   KALE  P+  +  + + +   +   +  AVE  
Sbjct: 119 EDADLWNNMAFSYSQVGEYERAVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAVEAY 178

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++   + K A+   G+AL  +G Y +A  A+ KAI++D  FLEAW +       L +
Sbjct: 179 EKVLEESPDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLEAWYYKGVDLDSLGS 238

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +AL+  ++ + +D     A++  G+ L  L ++++AI      + I+  N +  Y + 
Sbjct: 239 HRQALKAYEKAVELDPENDDAWNNMGIDLENLEKYEEAINAFDKAIAINSENSDVWYNKG 298

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEK-----FVLQCLAFYQKEIALY 671
                +  + EA++ Y  A  L+ + +E      FVL  L  +++ +  Y
Sbjct: 299 FTLSQMHRFEEAVEAYRKATQLDPEYLEAYTSLGFVLAQLKNFEEALETY 348



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 119/255 (46%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A+  + + L+  P YP A  G+    +     E A+  + + ++ +P   EAW  
Sbjct: 135 GEYERAVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAVEAYEKVLEESPDYKEAWAG 194

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   +G   EAI    KA+E +P   +  + +G+          A++     V+LD 
Sbjct: 195 KGIALGQMGRYDEAIIAYDKAIEIDPGFLEAWYYKGVDLDSLGSHRQALKAYEKAVELDP 254

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           EN  A+  +G+ L ++ +Y++A  A  KAI ++    + W +       +   E+A+E  
Sbjct: 255 ENDDAWNNMGIDLENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEAY 314

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++   +D  + +AY   G +L  L   ++A++     L +D    +  + +A C   +G 
Sbjct: 315 RKATQLDPEYLEAYTSLGFVLAQLKNFEEALETYEKALELDQGAADSWFGKAVCLSFLGR 374

Query: 635 YREAIKDYDAALDLE 649
             EA   Y  A++++
Sbjct: 375 EEEAEDAYRKAVEID 389



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 96/201 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +GIA    G+Y  AI  +D+ ++ DP + EA   +G           A+  + +A++ +
Sbjct: 194 GKGIALGQMGRYDEAIIAYDKAIEIDPGFLEAWYYKGVDLDSLGSHRQALKAYEKAVELD 253

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW   G     L +  EAI    KA+     ++D+ + +G    +   F  AVE 
Sbjct: 254 PENDDAWNNMGIDLENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEA 313

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                +LD E   AYT LG  L+ +  +++A E + KA++LD+   ++W         L 
Sbjct: 314 YRKATQLDPEYLEAYTSLGFVLAQLKNFEEALETYEKALELDQGAADSWFGKAVCLSFLG 373

Query: 566 NSEKALECLQQVLYIDKRFSK 586
             E+A +  ++ + ID R+++
Sbjct: 374 REEEAEDAYRKAVEIDPRYAE 394



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 78/169 (46%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L+E G+   K   FN A+      ++ D +N         AL S G +++A + + KA++
Sbjct: 56  LNECGLDLLKLGKFNEAIIAFDKAIEKDPKNIYLLNNKAAALESFGRFEEALKLYQKAVE 115

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++    + W ++   Y  +   E+A+E   + L +   +  A++ + L L   G +++A+
Sbjct: 116 INSEDADLWNNMAFSYSQVGEYERAVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAV 175

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           +     L   P   E    +      +G Y EAI  YD A++++   +E
Sbjct: 176 EAYEKVLEESPDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLE 224



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L +L  + +AI   D  +A + E  D+  N+ F  SQ+   +  +    KA QLDP  L+
Sbjct: 267 LENLEKYEEAINAFDKAIAINSENSDVWYNKGFTLSQMHRFEEAVEAYRKATQLDPEYLE 326

Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSA 138
           AY   G   + L   EEAL  +EK  E  L Q A
Sbjct: 327 AYTSLGFVLAQLKNFEEALETYEKALE--LDQGA 358



 Score = 42.7 bits (99), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 7/132 (5%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
           +L K ++ I   D+ +  D      +  +   A L S   + +A+++    +  + E  D
Sbjct: 65  KLGKFNEAIIAFDKAIEKDPKNIYLLNNKA--AALESFGRFEEALKLYQKAVEINSEDAD 122

Query: 72  ICNR-AFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
           + N  AF YSQ+  ++  +    KAL+L P    A+  K    S  G  EEA+    + Y
Sbjct: 123 LWNNMAFSYSQVGEYERAVEAYGKALELRPDYPNAWYGKALNLSQAGSYEEAV----EAY 178

Query: 131 EHALHQSADLKQ 142
           E  L +S D K+
Sbjct: 179 EKVLEESPDYKE 190



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L    ++ +A+   + +L +S + ++    +     Q+  +   I   DKA+++DP  L+
Sbjct: 165 LSQAGSYEEAVEAYEKVLEESPDYKEAWAGKGIALGQMGRYDEAIIAYDKAIEIDPGFLE 224

Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
           A+  KG    +LG   +AL  +EK  E
Sbjct: 225 AWYYKGVDLDSLGSHRQALKAYEKAVE 251


>gi|427720339|ref|YP_007068333.1| serine/threonine protein kinase [Calothrix sp. PCC 7507]
 gi|427352775|gb|AFY35499.1| serine/threonine protein kinase with TPR repeats [Calothrix sp. PCC
           7507]
          Length = 670

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 111/237 (46%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG  +        A+ D T+AI+ NP    A+ RRG A   LGE  +A  D SKA++  P
Sbjct: 316 RGVGKYEIGNYSGAVKDLTQAIELNPKNALAYNRRGDAFYRLGEYQKAQADSSKAIQLNP 375

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
             A+  ++RG   ++   + AA+ D +  + L+  N  AY   G+A   + +++ A    
Sbjct: 376 RDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQMKDHQGAFGDF 435

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            KAI L  N+ EA+       + L   + A++ L   + ++   +KAY+ RGL      Q
Sbjct: 436 SKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDLDAAIELNPNDAKAYYQRGLAQFSNQQ 495

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
              A+ D ++ + + P  IE    R   +  +G   EA  DY+  L +   S   +V
Sbjct: 496 KHAAVSDFTNAINLSPKYIEAYLSRGDAHSELGNKLEATADYNKVLQINPKSSIAYV 552



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 13/282 (4%)

Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           SK+I ++ R       RG      GKY +AI+ + + +  +     A  GRG AR   ++
Sbjct: 368 SKAIQLNPRDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQMKD 427

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + A  DF++AI    +  EA+ +RG  R  L +   AIQDL  A+E  PN A   ++RG
Sbjct: 428 HQGAFGDFSKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDLDAAIELNPNDAKAYYQRG 487

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN- 549
           +  F  +  +AAV D +  + L  +   AY   G A S +G   +A   + K +Q++   
Sbjct: 488 LAQFSNQQKHAAVSDFTNAINLSPKYIEAYLSRGDAHSELGNKLEATADYNKVLQINPKS 547

Query: 550 ---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
              ++    H   F     + + A++   Q + +D + + AY+ RG +    G  K A +
Sbjct: 548 SIAYVRRGAHRFSF----GDVQGAIKDYTQAIKLDSKNAAAYNNRGNVHLERGNQKAASE 603

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           D S  + ++PS     Y R       G    AI D+  A  L
Sbjct: 604 DYSQAIKVNPSYALAYYNRGLIKAKQGNRASAIGDFQQAAKL 645



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 120/262 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A +   + ++ +P    A   RG       +  AAI+D+T+AI  N 
Sbjct: 350 RGDAFYRLGEYQKAQADSSKAIQLNPRDANAYYDRGFTFYELGKYPAAIADYTKAITLNS 409

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG AR  + +   A  D SKA+  + N  +   +RGI+  + K   AA++DL
Sbjct: 410 RNAYAYYGRGIARVQMKDHQGAFGDFSKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDL 469

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            A ++L+  +  AY   GLA  S  +   A      AI L   ++EA+      + +L N
Sbjct: 470 DAAIELNPNDAKAYYQRGLAQFSNQQKHAAVSDFTNAINLSPKYIEAYLSRGDAHSELGN 529

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A     +VL I+ + S AY  RG      G  + AIKD +  + +D  N      R 
Sbjct: 530 KLEATADYNKVLQINPKSSIAYVRRGAHRFSFGDVQGAIKDYTQAIKLDSKNAAAYNNRG 589

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
           + +   G  + A +DY  A+ +
Sbjct: 590 NVHLERGNQKAASEDYSQAIKV 611



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 106/215 (49%), Gaps = 7/215 (3%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           +++RG+  ++  +++ AV+DL+  ++L+ +N  AY   G A   +GEY+KA+    KAIQ
Sbjct: 313 IYQRGVGKYEIGNYSGAVKDLTQAIELNPKNALAYNRRGDAFYRLGEYQKAQADSSKAIQ 372

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           L+     A+      + +L     A+    + + ++ R + AY+ RG+    +  H+ A 
Sbjct: 373 LNPRDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQMKDHQGAF 432

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            D S  + +  +  E    R      + + + AI+D DAA++L  +  +       A+YQ
Sbjct: 433 GDFSKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDLDAAIELNPNDAK-------AYYQ 485

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           + +A ++  + ++    F    ++ P + E +  R
Sbjct: 486 RGLAQFSNQQKHAAVSDFTNAINLSPKYIEAYLSR 520



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 102/205 (49%), Gaps = 2/205 (0%)

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           +RG  +  +G    A++DL++A+E  P +A   + RG   ++  ++  A  D S  ++L+
Sbjct: 315 QRGVGKYEIGNYSGAVKDLTQAIELNPKNALAYNRRGDAFYRLGEYQKAQADSSKAIQLN 374

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDLANSEKALE 572
             + +AY   G     +G+Y  A   + KAI L+ RN    +G      Q + + + A  
Sbjct: 375 PRDANAYYDRGFTFYELGKYPAAIADYTKAITLNSRNAYAYYGRGIARVQ-MKDHQGAFG 433

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + + +   +++AY  RG++   L Q + AI+DL + + ++P++ +  Y R     + 
Sbjct: 434 DFSKAIALKSNYTEAYLQRGIIRRRLKQKQAAIQDLDAAIELNPNDAKAYYQRGLAQFSN 493

Query: 633 GEYREAIKDYDAALDLELDSMEKFV 657
            +   A+ D+  A++L    +E ++
Sbjct: 494 QQKHAAVSDFTNAINLSPKYIEAYL 518



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 2/142 (1%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           ++  LSRG A    G    A + ++++L+ +P    A + RG  R    +++ AI D+T+
Sbjct: 514 IEAYLSRGDAHSELGNKLEATADYNKVLQINPKSSIAYVRRGAHRFSFGDVQGAIKDYTQ 573

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI+ +     A+  RG      G    A +D S+A++  P+ A   + RG++  K  +  
Sbjct: 574 AIKLDSKNAAAYNNRGNVHLERGNQKAASEDYSQAIKVNPSYALAYYNRGLIKAKQGNRA 633

Query: 501 AAVEDLSACVKL--DKENKSAY 520
           +A+ D     KL   K NK  Y
Sbjct: 634 SAIGDFQQAAKLFEKKGNKEGY 655


>gi|427416698|ref|ZP_18906881.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
 gi|425759411|gb|EKV00264.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
          Length = 272

 Score =  102 bits (254), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 60/193 (31%), Positives = 102/193 (52%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           + L+ RG  +A Q +L AAI+ +T+ I+++    EA+ +RG A   +G+  +AI D S A
Sbjct: 46  DELLERGQQQAKQGQLAAAIATYTQLIEADTDNAEAYLQRGIAYHDVGDINQAIDDFSAA 105

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L    +  +  + RG       + NAA+ DL+  + LD E   AY   G  L+ +G++  
Sbjct: 106 LRLRSDHPETFYHRGEAYLHTSNVNAAIADLTQAIDLDPEFTRAYMDRGTVLAELGQFSL 165

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A     +A+ L+ +  +A+ +  Q Y  L + + AL      + +D   ++AY  RGLL 
Sbjct: 166 ALTDFQQAVALEPDNADAYYNRAQVYIGLRDGQTALADFDTAIRLDPELAEAYGTRGLLN 225

Query: 596 HGLGQHKKAIKDL 608
           H LG  ++A+ DL
Sbjct: 226 HRLGNSQQAMADL 238



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 1/193 (0%)

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
           + V A+Q  + A+     +AD L ERG    K     AA+   +  ++ D +N  AY   
Sbjct: 27  QPVRAVQP-AHAVPLMATNADELLERGQQQAKQGQLAAAIATYTQLIEADTDNAEAYLQR 85

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G+A   +G+  +A +    A++L  +  E + H  + Y   +N   A+  L Q + +D  
Sbjct: 86  GIAYHDVGDINQAIDDFSAALRLRSDHPETFYHRGEAYLHTSNVNAAIADLTQAIDLDPE 145

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           F++AY  RG +L  LGQ   A+ D    + ++P N +  Y RA  Y  + + + A+ D+D
Sbjct: 146 FTRAYMDRGTVLAELGQFSLALTDFQQAVALEPDNADAYYNRAQVYIGLRDGQTALADFD 205

Query: 644 AALDLELDSMEKF 656
            A+ L+ +  E +
Sbjct: 206 TAIRLDPELAEAY 218



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 54/179 (30%), Positives = 85/179 (47%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T++ ++ + + +  L RGIA  + G    AI  F   L+    +PE    RG A      
Sbjct: 69  TQLIEADTDNAEAYLQRGIAYHDVGDINQAIDDFSAALRLRSDHPETFYHRGEAYLHTSN 128

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           + AAI+D T+AI  +P    A+  RG   A LG+   A+ D  +A+  EP++AD  + R 
Sbjct: 129 VNAAIADLTQAIDLDPEFTRAYMDRGTVLAELGQFSLALTDFQQAVALEPDNADAYYNRA 188

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            V    +D   A+ D    ++LD E   AY   GL    +G  ++A     +A  L +N
Sbjct: 189 QVYIGLRDGQTALADFDTAIRLDPELAEAYGTRGLLNHRLGNSQQAMADLQQAATLFQN 247



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 61/136 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A ++     +AI+   Q +  DP +  A + RGT  A   +   A++DF +A+   P
Sbjct: 119 RGEAYLHTSNVNAAIADLTQAIDLDPEFTRAYMDRGTVLAELGQFSLALTDFQQAVALEP 178

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  R Q    L +   A+ D   A+  +P  A+    RG++N +  +   A+ DL
Sbjct: 179 DNADAYYNRAQVYIGLRDGQTALADFDTAIRLDPELAEAYGTRGLLNHRLGNSQQAMADL 238

Query: 507 SACVKLDKENKSAYTY 522
                L +      +Y
Sbjct: 239 QQAATLFQNRGDQESY 254



 Score = 50.1 bits (118), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 48/100 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG      G+++ A++ F Q +  +P   +A   R       R+ + A++DF  AI+ 
Sbjct: 151 MDRGTVLAELGQFSLALTDFQQAVALEPDNADAYYNRAQVYIGLRDGQTALADFDTAIRL 210

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           +P   EA+  RG     LG S +A+ DL +A     N  D
Sbjct: 211 DPELAEAYGTRGLLNHRLGNSQQAMADLQQAATLFQNRGD 250


>gi|386810943|ref|ZP_10098169.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386405667|dbj|GAB61050.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 560

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 117/258 (45%), Gaps = 4/258 (1%)

Query: 395 GKYASAISI----FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           GK  S +SI    + + L  D +     + R   +  Q  +E A+ D   AI+ + +   
Sbjct: 214 GKRISQMSIKKGYYLKNLTMDEVIANIYLNRSIIQKEQGNIENALKDVNRAIELHKNDAV 273

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+  RG      G    AI D +K+++  P+ A   + RG +    +    A+ D S  V
Sbjct: 274 AYCNRGVIYEKTGNVEHAIYDYNKSIDLNPDYAPAYYNRGSLYASMEKLEKAIIDYSMAV 333

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
            LD  +  +Y   G+A   +G    + E   K I LD  F  A+ H    Y +   SEKA
Sbjct: 334 SLDPNSILSYYNRGIAFKMVGRVDLSIEDLSKVISLDHTFAVAYAHRGLAYAESGESEKA 393

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           +    + L ID   ++ Y  RG+L   L     AIKDL++ +   P+N    Y+RA  Y 
Sbjct: 394 MADFNKALEIDPNHAETYMKRGILHADLQHFDDAIKDLTTFIQCVPNNAFAYYIRAKAYR 453

Query: 631 AIGEYREAIKDYDAALDL 648
             GE  +++ DYD  ++L
Sbjct: 454 GKGEIEKSMADYDRVIEL 471



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 136/304 (44%), Gaps = 34/304 (11%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           +  +  L+R I Q  +G   +A+   ++ ++       A   RG        +E AI D+
Sbjct: 236 VIANIYLNRSIIQKEQGNIENALKDVNRAIELHKNDAVAYCNRGVIYEKTGNVEHAIYDY 295

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
            ++I  NP    A+  RG   A++ +  +AI D S A+  +PNS    + RGI       
Sbjct: 296 NKSIDLNPDYAPAYYNRGSLYASMEKLEKAIIDYSMAVSLDPNSILSYYNRGIAFKMVGR 355

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN--------- 549
            + ++EDLS  + LD     AY + GLA +  GE +KA     KA+++D N         
Sbjct: 356 VDLSIEDLSKVISLDHTFAVAYAHRGLAYAESGESEKAMADFNKALEIDPNHAETYMKRG 415

Query: 550 --------FLEAWGHLTQFYQDLANS-----------------EKALECLQQVLYIDKRF 584
                   F +A   LT F Q + N+                 EK++    +V+ ++ R 
Sbjct: 416 ILHADLQHFDDAIKDLTTFIQCVPNNAFAYYIRAKAYRGKGEIEKSMADYDRVIELNPRM 475

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
           +  Y+ RG + + L + ++A+ D S+ L + P N      R + +  +GE + A++DY  
Sbjct: 476 AGVYYERGQIKNQLEKSREALMDFSTSLELFPYNPLAYLHRGNTFKKLGEMKNALRDYSV 535

Query: 645 ALDL 648
            L L
Sbjct: 536 YLKL 539



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 5/179 (2%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           SK IS+D   +     RG+A    G+   A++ F++ L+ DP + E  + RG   A  + 
Sbjct: 364 SKVISLDHTFAVAYAHRGLAYAESGESEKAMADFNKALEIDPNHAETYMKRGILHADLQH 423

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI D T  IQ  P+   A+  R +A    GE  +++ D  + +E  P  A + +ERG
Sbjct: 424 FDDAIKDLTTFIQCVPNNAFAYYIRAKAYRGKGEIEKSMADYDRVIELNPRMAGVYYERG 483

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            +  + +    A+ D S  ++L   N  AY + G     +GE K A   +   ++L+ N
Sbjct: 484 QIKNQLEKSREALMDFSTSLELFPYNPLAYLHRGNTFKKLGEMKNALRDYSVYLKLNPN 542



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 87/184 (47%)

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           K L  +   A+I   R I+  +  +   A++D++  ++L K +  AY   G+     G  
Sbjct: 229 KNLTMDEVIANIYLNRSIIQKEQGNIENALKDVNRAIELHKNDAVAYCNRGVIYEKTGNV 288

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           + A   + K+I L+ ++  A+ +    Y  +   EKA+      + +D     +Y+ RG+
Sbjct: 289 EHAIYDYNKSIDLNPDYAPAYYNRGSLYASMEKLEKAIIDYSMAVSLDPNSILSYYNRGI 348

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
               +G+   +I+DLS  + +D +       R   Y   GE  +A+ D++ AL+++ +  
Sbjct: 349 AFKMVGRVDLSIEDLSKVISLDHTFAVAYAHRGLAYAESGESEKAMADFNKALEIDPNHA 408

Query: 654 EKFV 657
           E ++
Sbjct: 409 ETYM 412



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 73/156 (46%), Gaps = 7/156 (4%)

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
           Y+ +    I +    +  +LK + +D      + + +   ++  N E AL+ + + + + 
Sbjct: 209 YVNMPGKRISQMSIKKGYYLKNLTMDEVIANIYLNRSIIQKEQGNIENALKDVNRAIELH 268

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
           K  + AY  RG++    G  + AI D +  + ++P      Y R S Y ++ +  +AI D
Sbjct: 269 KNDAVAYCNRGVIYEKTGNVEHAIYDYNKSIDLNPDYAPAYYNRGSLYASMEKLEKAIID 328

Query: 642 YDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN 677
           Y  A+ L+ +S+       L++Y + IA     +++
Sbjct: 329 YSMAVSLDPNSI-------LSYYNRGIAFKMVGRVD 357


>gi|113478145|ref|YP_724206.1| TPR repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110169193|gb|ABG53733.1| serine/threonine protein kinase with TPR repeats [Trichodesmium
           erythraeum IMS101]
          Length = 738

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 138/285 (48%), Gaps = 7/285 (2%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A++   Q L+ +P Y +A   RG       + ++AI D++E+I+ NP   + +  RG AR
Sbjct: 435 AMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKSAIQDYSESIRLNPKDSKTYINRGIAR 494

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
            AL + V AI D ++A++  PN     + RG   FK  D+  A+E+ +  +++  ++  A
Sbjct: 495 GALEDQVGAISDYTQAIKLNPNDVKAYYYRGKSLFKMLDYQGAIENYNQFLEVKPDDADA 554

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           YT    A    G    A     +AI+++     A+ +L   Y +L   ++A E     + 
Sbjct: 555 YTNRCSAYLHKGNDSSAIADCQQAIEINPQDFLAYHNLCIAYFNLGEYQRATENCSIAIG 614

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           IDK  +KAY  R L     G  ++AIKD ++ + I+P +      R   +  +  Y +AI
Sbjct: 615 IDKNNAKAYTNRALAQSARGYLQEAIKDFTTAIEINPQDDLNYSHRGMIFSVLKNYNQAI 674

Query: 640 KDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           KD+  A+ L  ++ +       A+Y + + L+    + +    F+
Sbjct: 675 KDFSQAIRLNSNNAK-------AYYNRGVILHKLEDLPAAIVDFN 712



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 153/297 (51%), Gaps = 5/297 (1%)

Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           NK   +T ++++  I+ ++  +   RG+     G Y SAI  + + ++ +P   +  I R
Sbjct: 431 NKDKAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKSAIQDYSESIRLNPKDSKTYINR 490

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G AR    +   AISD+T+AI+ NP+  +A+  RG++   + +   AI++ ++ LE +P+
Sbjct: 491 GIARGALEDQVGAISDYTQAIKLNPNDVKAYYYRGKSLFKMLDYQGAIENYNQFLEVKPD 550

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            AD    R        + ++A+ D    ++++ ++  AY  L +A  ++GEY++A E   
Sbjct: 551 DADAYTNRCSAYLHKGNDSSAIADCQQAIEINPQDFLAYHNLCIAYFNLGEYQRATENCS 610

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
            AI +D+N  +A+ +           ++A++     + I+ +    Y  RG++   L  +
Sbjct: 611 IAIGIDKNNAKAYTNRALAQSARGYLQEAIKDFTTAIEINPQDDLNYSHRGMIFSVLKNY 670

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD--AALDLELDSMEKF 656
            +AIKD S  + ++ +N +  Y R    H + +   AI D++  A+L L+ D ++ +
Sbjct: 671 NQAIKDFSQAIRLNSNNAKAYYNRGVILHKLEDLPAAIVDFNKSASLFLKQDQIKNY 727



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 128/262 (48%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG +  +   Y  AI  +   +K    Y +A   R          + A++D T+ ++ NP
Sbjct: 388 RGNSYYSHRSYEKAIKDYTAGIKIKANYEDAYYQRALVYYELDNKDKAMTDLTQTLRINP 447

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  +A+K+RG     +G+   AIQD S+++   P  +     RGI     +D   A+ D 
Sbjct: 448 NYTQAYKKRGLIYYEIGDYKSAIQDYSESIRLNPKDSKTYINRGIARGALEDQVGAISDY 507

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +KL+  +  AY Y G +L  + +Y+ A E + + +++  +  +A+ +    Y    N
Sbjct: 508 TQAIKLNPNDVKAYYYRGKSLFKMLDYQGAIENYNQFLEVKPDDADAYTNRCSAYLHKGN 567

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              A+   QQ + I+ +   AYH   +    LG++++A ++ S  +GID +N +    RA
Sbjct: 568 DSSAIADCQQAIEINPQDFLAYHNLCIAYFNLGEYQRATENCSIAIGIDKNNAKAYTNRA 627

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
               A G  +EAIKD+  A+++
Sbjct: 628 LAQSARGYLQEAIKDFTTAIEI 649



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 118/251 (47%), Gaps = 34/251 (13%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           + L  +G   A Q + +AAI+++TEA++ NP     + +RG +  +     +AI+D +  
Sbjct: 349 QTLYKKGQELAKQGKQQAAIANYTEALKLNPKKASIYYKRGNSYYSHRSYEKAIKDYTAG 408

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           ++ + N  D  ++R +V ++  + + A+ DL+  ++++     AY   GL    IG+YK 
Sbjct: 409 IKIKANYEDAYYQRALVYYELDNKDKAMTDLTQTLRINPNYTQAYKKRGLIYYEIGDYKS 468

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A + + ++I+L                                  + + SK Y  RG+  
Sbjct: 469 AIQDYSESIRL----------------------------------NPKDSKTYINRGIAR 494

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
             L     AI D +  + ++P++++  Y R      + +Y+ AI++Y+  L+++ D  + 
Sbjct: 495 GALEDQVGAISDYTQAIKLNPNDVKAYYYRGKSLFKMLDYQGAIENYNQFLEVKPDDADA 554

Query: 656 FVLQCLAFYQK 666
           +  +C A+  K
Sbjct: 555 YTNRCSAYLHK 565


>gi|119512967|ref|ZP_01632028.1| serine/threonine kinase [Nodularia spumigena CCY9414]
 gi|119462380|gb|EAW43356.1| serine/threonine kinase [Nodularia spumigena CCY9414]
          Length = 713

 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 127/260 (48%), Gaps = 2/260 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           KY  A++ +DQ ++  P Y EA  GRG   R  QR  EA I+ F +A+Q + +A E W  
Sbjct: 391 KYEEALAAYDQAIQIQPDYVEAWSGRGFVLRDLQRYPEA-IASFDKALQLDNTAPEIWNA 449

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G+    L +   AIQ  ++A+E +PN     + +G+     K +N A+      ++   
Sbjct: 450 KGEIFRNLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAINAYETAIEFKP 509

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+  LG AL ++  +  A +A+ KA+Q    F  AW   +     L    +A+E  
Sbjct: 510 DYGQAWYSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILIILRRYPQAIESF 569

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q +  +    +A++ RG  LH   ++++AI   +    I  ++ +  Y   +  + + +
Sbjct: 570 DQAIKHNPNDYQAWYSRGWALHQSQRYEEAIASYNKAAAIKRNDYQIWYNLGNSQYILQK 629

Query: 635 YREAIKDYDAALDLELDSME 654
           Y++AI  YD A+  + +  E
Sbjct: 630 YQQAIASYDKAVRYQTNHAE 649



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 141/312 (45%), Gaps = 14/312 (4%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           F V  I+   +I++     +G       +Y  A++ + + +   P Y     G+G   + 
Sbjct: 332 FIVNSINAHNAIALS---EQGSTLFELQRYQDALAAYQEAVSISPDYVPGWNGQGKTLSQ 388

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
            ++ E A++ + +AIQ  P   EAW  RG     L    EAI    KAL+ +  + +I +
Sbjct: 389 LKKYEEALAAYDQAIQIQPDYVEAWSGRGFVLRDLQRYPEAIASFDKALQLDNTAPEIWN 448

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G +    + +N A++  +  ++L      A+   GLA  ++ +Y  A  A+  AI+  
Sbjct: 449 AKGEIFRNLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAINAYETAIEFK 508

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            ++ +AW  L     +L   + AL+   + +    +F  A+  R  +L  L ++ +AI+ 
Sbjct: 509 PDYGQAWYSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILIILRRYPQAIES 568

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME--------KFVLQ 659
               +  +P++ +  Y R    H    Y EAI  Y+ A  ++ +  +        +++LQ
Sbjct: 569 FDQAIKHNPNDYQAWYSRGWALHQSQRYEEAIASYNKAAAIKRNDYQIWYNLGNSQYILQ 628

Query: 660 CLAFYQKEIALY 671
               YQ+ IA Y
Sbjct: 629 K---YQQAIASY 637



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 100/225 (44%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           N  +Y +AI  ++Q ++  P Y +A   +G A    ++   AI+ +  AI+  P  G+AW
Sbjct: 456 NLQQYNNAIQSYNQAIELQPNYYQAWYSKGLAFHNLKQYNDAINAYETAIEFKPDYGQAW 515

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
              G A   L     A++   KA+++ P        R  +    + +  A+E     +K 
Sbjct: 516 YSLGNALFNLNRFDNALKAYDKAVQYRPKFYPAWFSRSNILIILRRYPQAIESFDQAIKH 575

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           +  +  A+   G AL     Y++A  ++ KA  + RN  + W +L      L   ++A+ 
Sbjct: 576 NPNDYQAWYSRGWALHQSQRYEEAIASYNKAAAIKRNDYQIWYNLGNSQYILQKYQQAIA 635

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              + +      +++++ RG  L  L ++K+AI      +   P+
Sbjct: 636 SYDKAVRYQTNHAESWYSRGNALLNLQRYKEAIDSYDQAIKYKPN 680



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/186 (20%), Positives = 82/186 (44%), Gaps = 7/186 (3%)

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           ++  N  A +  G  L  +  Y+ A  A+ +A+ +  +++  W    +    L   E+AL
Sbjct: 337 INAHNAIALSEQGSTLFELQRYQDALAAYQEAVSISPDYVPGWNGQGKTLSQLKKYEEAL 396

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               Q + I   + +A+  RG +L  L ++ +AI      L +D +  E    +   +  
Sbjct: 397 AAYDQAIQIQPDYVEAWSGRGFVLRDLQRYPEAIASFDKALQLDNTAPEIWNAKGEIFRN 456

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           + +Y  AI+ Y+ A++L+ +  +       A+Y K +A +   + N     ++   +  P
Sbjct: 457 LQQYNNAIQSYNQAIELQPNYYQ-------AWYSKGLAFHNLKQYNDAINAYETAIEFKP 509

Query: 692 LFKEYW 697
            + + W
Sbjct: 510 DYGQAW 515



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/206 (20%), Positives = 90/206 (43%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+G+A  N  +Y  AI+ ++  ++  P Y +A    G A       + A+  + +A+Q  
Sbjct: 483 SKGLAFHNLKQYNDAINAYETAIEFKPDYGQAWYSLGNALFNLNRFDNALKAYDKAVQYR 542

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  R      L    +AI+   +A++  PN     + RG    + + +  A+  
Sbjct: 543 PKFYPAWFSRSNILIILRRYPQAIESFDQAIKHNPNDYQAWYSRGWALHQSQRYEEAIAS 602

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +    + + +   +  LG +   + +Y++A  ++ KA++   N  E+W        +L 
Sbjct: 603 YNKAAAIKRNDYQIWYNLGNSQYILQKYQQAIASYDKAVRYQTNHAESWYSRGNALLNLQ 662

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLR 591
             ++A++   Q +     + +A + R
Sbjct: 663 RYKEAIDSYDQAIKYKPNYRQAINAR 688


>gi|91772658|ref|YP_565350.1| TPR repeat-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91711673|gb|ABE51600.1| Tetratricopeptide repeat protein [Methanococcoides burtonii DSM
           6242]
          Length = 1049

 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 139/300 (46%), Gaps = 29/300 (9%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS- 444
           ++  AQ   G Y  AI+ +D ILK  P  P     +G   A + + E AI  + +A+ S 
Sbjct: 68  NKAAAQYLYGDYDEAIATYDHILKLQPGSPLIFTKKGMVLAKKGDYENAIKTYDKALMSI 127

Query: 445 ---------------NPSAGEAW-------------KRRGQARAALGESVEAIQDLSKAL 476
                          N S   A+               + ++   LG + EAIQ   K L
Sbjct: 128 SKYILGNTLNDTSELNGSTSTAYIIEELGVDESMILYHKAKSLEGLGRNEEAIQLYEKFL 187

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           E +   +  L+E+G+ + +      A+E     +++D +N++ +   G A  S+G Y++A
Sbjct: 188 EIQLEHSMTLYEKGLDHARDGKSERAIELYDEALQIDPDNRTIWYSKGQAFDSLGLYEEA 247

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
            E++ KAI+ D   ++ W +    Y  L   E A+   ++VL +D   ++A+   G+ L 
Sbjct: 248 IESYNKAIEFDSTDVKVWWNKALDYDKLDKKEDAIISYREVLVLDLYNAEAWFNLGVALE 307

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           G G + +AI      L +DP NI+  + +    + IG + EA+  YD+AL +  D++ K 
Sbjct: 308 GTGNYFEAINSFEQVLLLDPDNIDAWHKKGLVLNKIGRFDEALVSYDSALKINPDNIAKI 367



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 34/236 (14%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           +A + +G +   +   E A+  + +AI   P++   W  RGQ    LG+   AI +  KA
Sbjct: 634 DAWVAKGGSLFVKGSYENALLSYNKAIMIKPNSSVTWYMRGQTYEMLGDRSSAINNYEKA 693

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           ++ + +  D         +K  ++  A++     + LD ENK+A    G A   IG Y+ 
Sbjct: 694 VDLDSSYKDAWFALAQNVYKSSNYYYAIQAYDGLLNLDPENKTALLQKGQAYDKIGIYRS 753

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           +  ++ K +++D +  EAW                                  +LRGL  
Sbjct: 754 SLASYNKLLKVDTDNTEAW----------------------------------YLRGLAS 779

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           + LG  + A+      L  DP NI+ L  ++     +G + ++I +YD  L++++D
Sbjct: 780 YNLGNLEDAVYSYDKVLSSDPQNIDVLLAQSLVLEDLGLFEDSINNYDKVLEMKVD 835



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 124/297 (41%), Gaps = 35/297 (11%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDP-----------------MYPEALIGRGTARAFQR 429
           +G+    +GK   AI ++D+ L+ DP                 +Y EA+     A  F  
Sbjct: 200 KGLDHARDGKSERAIELYDEALQIDPDNRTIWYSKGQAFDSLGLYEEAIESYNKAIEFDS 259

Query: 430 -----------------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
                            + E AI  + E +  +    EAW   G A    G   EAI   
Sbjct: 260 TDVKVWWNKALDYDKLDKKEDAIISYREVLVLDLYNAEAWFNLGVALEGTGNYFEAINSF 319

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            + L  +P++ D  H++G+V  K   F+ A+    + +K++ +N +       A++S+  
Sbjct: 320 EQVLLLDPDNIDAWHKKGLVLNKIGRFDEALVSYDSALKINPDNIAKIYTSNPAIASLNT 379

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
             +  E +      + +  + W      Y  L++ E+A+   ++VL +D + +  ++ + 
Sbjct: 380 -SQFSECYAAIPSFNSDSAKIWYDKGTLYLGLSDYEEAVLSFEKVLELDSKHAVVWYKKA 438

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           L L  LG + +AI   +  L  DPS     YL+       G Y+EA+  Y   ++L+
Sbjct: 439 LALDKLGNYNEAIICYTEALRRDPSCPNVWYLKGYDLDTTGRYKEAVSCYRKTVELD 495



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 33/264 (12%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDP-----------------MYPEALIGRGTARAFQRE 430
           G+A    G Y  AI+ F+Q+L  DP                  + EAL+   +A     +
Sbjct: 303 GVALEGTGNYFEAINSFEQVLLLDPDNIDAWHKKGLVLNKIGRFDEALVSYDSALKINPD 362

Query: 431 LEAAI------------SDFTEAIQSNPS----AGEAWKRRGQARAALGESVEAIQDLSK 474
             A I            S F+E   + PS    + + W  +G     L +  EA+    K
Sbjct: 363 NIAKIYTSNPAIASLNTSQFSECYAAIPSFNSDSAKIWYDKGTLYLGLSDYEEAVLSFEK 422

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
            LE +   A + +++ +   K  ++N A+   +  ++ D    + +   G  L + G YK
Sbjct: 423 VLELDSKHAVVWYKKALALDKLGNYNEAIICYTEALRRDPSCPNVWYLKGYDLDTTGRYK 482

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           +A   + K ++LD  F  AW  L      +    +A+    QV+  +  FS AY+ +G  
Sbjct: 483 EAVSCYRKTVELDPQFTLAWYALGLDLAHMDEHSEAIAAYDQVIEQNSDFSDAYYRKGRT 542

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSN 618
           L  LG ++ AI+     + +D SN
Sbjct: 543 LDKLGLYQDAIESYRVAISLDSSN 566



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 134/319 (42%), Gaps = 35/319 (10%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A+S + + ++ DP +  A    G   A   E   AI+ + + I+ N    +A+ R
Sbjct: 479 GRYKEAVSCYRKTVELDPQFTLAWYALGLDLAHMDEHSEAIAAYDQVIEQNSDFSDAYYR 538

Query: 455 RGQARAALGESVEAIQ---------------------DLSKALEFEPNSADILHERGIVN 493
           +G+    LG   +AI+                     D+S+      +SA      G + 
Sbjct: 539 KGRTLDKLGLYQDAIESYRVAISLDSSNSAASFQMEADISRVERLNHSSAIPSQNIGPIF 598

Query: 494 FKFK---------DFNAAVEDLSAC--VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
             F+         D+NAA+ + +    + +  +   A+   G +L   G Y+ A  ++ K
Sbjct: 599 DIFEIIKGMTGISDYNAAIMEQNNVDLIGVVPDGYDAWVAKGGSLFVKGSYENALLSYNK 658

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           AI +  N    W    Q Y+ L +   A+   ++ + +D  +  A+      ++    + 
Sbjct: 659 AIMIKPNSSVTWYMRGQTYEMLGDRSSAINNYEKAVDLDSSYKDAWFALAQNVYKSSNYY 718

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            AI+     L +DP N   L  +   Y  IG YR ++  Y+  L ++ D+ E + L+ LA
Sbjct: 719 YAIQAYDGLLNLDPENKTALLQKGQAYDKIGIYRSSLASYNKLLKVDTDNTEAWYLRGLA 778

Query: 663 FY---QKEIALYTASKINS 678
            Y     E A+Y+  K+ S
Sbjct: 779 SYNLGNLEDAVYSYDKVLS 797



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 102/253 (40%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG+A  N G    A+  +D++L  DP   + L+ +          E +I+++ + ++   
Sbjct: 775  RGLASYNLGNLEDAVYSYDKVLSSDPQNIDVLLAQSLVLEDLGLFEDSINNYDKVLEMKV 834

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                   ++G     LG   +A       L  EP ++  L  +G   +   D+  A++  
Sbjct: 835  DDPSVLMKKGNVYEKLGLYKDANDCYDIVLINEPANSLALSRKGFNLYMLGDYIGAMDQY 894

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               +  +  + +A+   G        Y  + + +LKA++L    + AW +L        +
Sbjct: 895  DLVIAKNPYDAAAWYNKGNVAYLTSSYAGSTQFYLKAVELQPKSITAWYNLGYIANIRGD 954

Query: 567  SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             + A+   ++ L ID   + A + +    + +GQ   A  +      IDP  I  L  R 
Sbjct: 955  VDTAITYYEKALAIDPNAASALYNKRFAHYRVGQSVSAETERKKLDVIDPEFIVALDDRG 1014

Query: 627  SCYHAIGEYREAI 639
            + +    EY  AI
Sbjct: 1015 TKFFTPDEYDPAI 1027



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 29/228 (12%)

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           ++   G A    G   +AI+    AL  +PN    L  +    + + D++ A+      +
Sbjct: 31  SFNEEGVALMLNGTYDKAIEKYDLALVSDPNYRIALENKAAAQYLYGDYDEAIATYDHIL 90

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-------------------- 550
           KL   +   +T  G+ L+  G+Y+ A + + KA+     +                    
Sbjct: 91  KLQPGSPLIFTKKGMVLAKKGDYENAIKTYDKALMSISKYILGNTLNDTSELNGSTSTAY 150

Query: 551 -LEAWG--------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
            +E  G        H  +  + L  +E+A++  ++ L I    S   + +GL     G+ 
Sbjct: 151 IIEELGVDESMILYHKAKSLEGLGRNEEAIQLYEKFLEIQLEHSMTLYEKGLDHARDGKS 210

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           ++AI+     L IDP N    Y +   + ++G Y EAI+ Y+ A++ +
Sbjct: 211 ERAIELYDEALQIDPDNRTIWYSKGQAFDSLGLYEEAIESYNKAIEFD 258



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 53/265 (20%), Positives = 111/265 (41%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  +++G +   +G Y +A+  +++ +   P        RG       +  +AI+++ +A
Sbjct: 634 DAWVAKGGSLFVKGSYENALLSYNKAIMIKPNSSVTWYMRGQTYEMLGDRSSAINNYEKA 693

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +  + S  +AW    Q          AIQ     L  +P +   L ++G    K   + +
Sbjct: 694 VDLDSSYKDAWFALAQNVYKSSNYYYAIQAYDGLLNLDPENKTALLQKGQAYDKIGIYRS 753

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           ++   +  +K+D +N  A+   GLA  ++G  + A  ++ K +  D   ++     +   
Sbjct: 754 SLASYNKLLKVDTDNTEAWYLRGLASYNLGNLEDAVYSYDKVLSSDPQNIDVLLAQSLVL 813

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           +DL   E ++    +VL +          +G +   LG +K A       L  +P+N   
Sbjct: 814 EDLGLFEDSINNYDKVLEMKVDDPSVLMKKGNVYEKLGLYKDANDCYDIVLINEPANSLA 873

Query: 622 LYLRASCYHAIGEYREAIKDYDAAL 646
           L  +    + +G+Y  A+  YD  +
Sbjct: 874 LSRKGFNLYMLGDYIGAMDQYDLVI 898



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 106/253 (41%), Gaps = 6/253 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +G A    G Y S+++ ++++LK D    EA   RG A      LE A+  + + + S
Sbjct: 739 LQKGQAYDKIGIYRSSLASYNKLLKVDTDNTEAWYLRGLASYNLGNLEDAVYSYDKVLSS 798

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P   +    +      LG   ++I +  K LE + +   +L ++G V  K   +  A +
Sbjct: 799 DPQNIDVLLAQSLVLEDLGLFEDSINNYDKVLEMKVDDPSVLMKKGNVYEKLGLYKDAND 858

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFY 561
                +  +  N  A +  G  L  +G+Y  A + +   I  +     AW   G++    
Sbjct: 859 CYDIVLINEPANSLALSRKGFNLYMLGDYIGAMDQYDLVIAKNPYDAAAWYNKGNVAYLT 918

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
              A S +    L+ V    K  +  Y+L G + +  G    AI      L IDP+    
Sbjct: 919 SSYAGSTQF--YLKAVELQPKSITAWYNL-GYIANIRGDVDTAITYYEKALAIDPNAASA 975

Query: 622 LYLRASCYHAIGE 634
           LY +   ++ +G+
Sbjct: 976 LYNKRFAHYRVGQ 988


>gi|384208606|ref|YP_005594326.1| hypothetical protein Bint_1125 [Brachyspira intermedia PWS/A]
 gi|343386256|gb|AEM21746.1| TPR repeat-containing protein [Brachyspira intermedia PWS/A]
          Length = 348

 Score =  102 bits (253), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 70/239 (29%), Positives = 127/239 (53%), Gaps = 3/239 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A    GKY +A+  F+  LK D    +    +G       + E AI D+T++I+ + 
Sbjct: 42  RGLANNKLGKYKAALKDFNTALKLDNNNADIYYNKGLTEYDMGDYEKAIKDYTKSIKLDN 101

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           + G+ +  RG   AALGE  ++I+D + A++   N A+  + RG+  +  +D+  A+ D 
Sbjct: 102 TIGDVYNNRGLCYAALGEFEKSIKDFTCAIKLNKNDAEFYYNRGLAKYNLEDYQNALMDF 161

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEA-HLKAIQLDRNFLEAWGHLTQFYQDLA 565
              ++++ +  +AY   G     +   ++   A + K+I++D N + A+ +   +Y    
Sbjct: 162 DKAIEINPKYSNAYNNRGNVKDELNYNEEDIIADYDKSIEIDNN-INAYFNKALYYDINE 220

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
           N EKAL    +VL ID+ + +AY  RG +L+ L ++ +AIKD +  + +D S    LYL
Sbjct: 221 NYEKALNLYNKVLEIDEYYIEAYGNRGFVLYKLNKYDEAIKDCNKAIELD-SKYWILYL 278



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 60/235 (25%), Positives = 119/235 (50%), Gaps = 2/235 (0%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E +I  + + I  N    E +  RG A   LG+   A++D + AL+ + N+ADI + +G+
Sbjct: 19  EKSIEYYDKLIFYNGDNAEIYNCRGLANNKLGKYKAALKDFNTALKLDNNNADIYYNKGL 78

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             +   D+  A++D +  +KLD      Y   GL  +++GE++K+ +    AI+L++N  
Sbjct: 79  TEYDMGDYEKAIKDYTKSIKLDNTIGDVYNNRGLCYAALGEFEKSIKDFTCAIKLNKNDA 138

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK-AIKDLSS 610
           E + +      +L + + AL    + + I+ ++S AY+ RG +   L  +++  I D   
Sbjct: 139 EFYYNRGLAKYNLEDYQNALMDFDKAIEINPKYSNAYNNRGNVKDELNYNEEDIIADYDK 198

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            + ID +NI   + +A  Y     Y +A+  Y+  L+++   +E +  +    Y+
Sbjct: 199 SIEID-NNINAYFNKALYYDINENYEKALNLYNKVLEIDEYYIEAYGNRGFVLYK 252



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/215 (24%), Positives = 107/215 (49%), Gaps = 7/215 (3%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G   ++I+   K + +  ++A+I + RG+ N K   + AA++D +  +KLD  N   Y  
Sbjct: 16  GNYEKSIEYYDKLIFYNGDNAEIYNCRGLANNKLGKYKAALKDFNTALKLDNNNADIYYN 75

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            GL    +G+Y+KA + + K+I+LD    + + +    Y  L   EK+++     + ++K
Sbjct: 76  KGLTEYDMGDYEKAIKDYTKSIKLDNTIGDVYNNRGLCYAALGEFEKSIKDFTCAIKLNK 135

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE-AIKD 641
             ++ Y+ RGL  + L  ++ A+ D    + I+P        R +    +    E  I D
Sbjct: 136 NDAEFYYNRGLAKYNLEDYQNALMDFDKAIEINPKYSNAYNNRGNVKDELNYNEEDIIAD 195

Query: 642 YDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
           YD +++++ +++  +  + L +     Y+K + LY
Sbjct: 196 YDKSIEID-NNINAYFNKALYYDINENYEKALNLY 229



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 80/155 (51%)

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           F   ++  ++E     +  + +N   Y   GLA + +G+YK A +    A++LD N  + 
Sbjct: 13  FDAGNYEKSIEYYDKLIFYNGDNAEIYNCRGLANNKLGKYKAALKDFNTALKLDNNNADI 72

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           + +      D+ + EKA++   + + +D      Y+ RGL    LG+ +K+IKD +  + 
Sbjct: 73  YYNKGLTEYDMGDYEKAIKDYTKSIKLDNTIGDVYNNRGLCYAALGEFEKSIKDFTCAIK 132

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           ++ ++ E  Y R    + + +Y+ A+ D+D A+++
Sbjct: 133 LNKNDAEFYYNRGLAKYNLEDYQNALMDFDKAIEI 167



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 54/87 (62%)

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           D  N EK++E   ++++ +   ++ Y+ RGL  + LG++K A+KD ++ L +D +N +  
Sbjct: 14  DAGNYEKSIEYYDKLIFYNGDNAEIYNCRGLANNKLGKYKAALKDFNTALKLDNNNADIY 73

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLE 649
           Y +    + +G+Y +AIKDY  ++ L+
Sbjct: 74  YNKGLTEYDMGDYEKAIKDYTKSIKLD 100


>gi|186684246|ref|YP_001867442.1| hypothetical protein Npun_R4121 [Nostoc punctiforme PCC 73102]
 gi|186466698|gb|ACC82499.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 1319

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 132/293 (45%)

Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
           N    + R S +   +      +G++Q   G    AI+ +D+ ++  P + E    RG  
Sbjct: 396 NSPGIIERHSNNPITNAQGWFYQGLSQAKTGDLLGAIASYDRAIELQPEFSEYWFNRGLI 455

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
                  E AI+ +  AI+  P   +AW  RG     LG   EAI    KA+E +P+  +
Sbjct: 456 LFHLERFEEAIASYETAIELKPDFYKAWYNRGGTLGELGYFEEAIASFDKAIEVKPDYQE 515

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
               +G+   K      A+      + L+ E++  + + G+AL+   ++ +A  ++ KA+
Sbjct: 516 AWSSKGLALLKLGWLPEAIYSYDQALHLEPEDQENWYHRGIALAVGEQFAEAIISYDKAL 575

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           +++  + E W        +L    +A+    + L +   F  A++ RG+ L  LG+ ++A
Sbjct: 576 EINPEYHEVWIDRGVVLFNLGRWSEAIASWDKALSVQADFYLAWYNRGIALDNLGRRQEA 635

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           I      + I P      Y +A     + ++ EAI  YD AL+++ D  E ++
Sbjct: 636 IASYRQAIAIKPDFHLAWYNQAVALFYLEQFAEAIACYDNALEIKQDYWEAWI 688



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 5/220 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G +  AI+ FD+ ++  P Y EA   +G A      L  AI  + +A+   P   E W  
Sbjct: 494 GYFEEAIASFDKAIEVKPDYQEAWSSKGLALLKLGWLPEAIYSYDQALHLEPEDQENWYH 553

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A A   +  EAI    KALE  P   ++  +RG+V F    ++ A+      + +  
Sbjct: 554 RGIALAVGEQFAEAIISYDKALEINPEYHEVWIDRGVVLFNLGRWSEAIASWDKALSVQA 613

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
           +   A+   G+AL ++G  ++A  ++ +AI +  +F  AW +  +  FY  L    +A+ 
Sbjct: 614 DFYLAWYNRGIALDNLGRRQEAIASYRQAIAIKPDFHLAWYNQAVALFY--LEQFAEAIA 671

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           C    L I + + +A+  RG  +  L  +  A+ +LSS +
Sbjct: 672 CYDNALEIKQDYWEAWIGRGTAIGNL-VNSDALLNLSSNI 710



 Score = 48.1 bits (113), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 64/144 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA     ++A AI  +D+ L+ +P Y E  I RG           AI+ + +A+    
Sbjct: 554 RGIALAVGEQFAEAIISYDKALEINPEYHEVWIDRGVVLFNLGRWSEAIASWDKALSVQA 613

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  RG A   LG   EAI    +A+  +P+     + + +  F  + F  A+   
Sbjct: 614 DFYLAWYNRGIALDNLGRRQEAIASYRQAIAIKPDFHLAWYNQAVALFYLEQFAEAIACY 673

Query: 507 SACVKLDKENKSAYTYLGLALSSI 530
              +++ ++   A+   G A+ ++
Sbjct: 674 DNALEIKQDYWEAWIGRGTAIGNL 697



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 32/173 (18%)

Query: 560 FYQDLANSEK-----ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           FYQ L+ ++      A+    + + +   FS+ +  RGL+L  L + ++AI    + + +
Sbjct: 416 FYQGLSQAKTGDLLGAIASYDRAIELQPEFSEYWFNRGLILFHLERFEEAIASYETAIEL 475

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA------------ 662
            P   +  Y R      +G + EAI  +D A++++ D  E +  + LA            
Sbjct: 476 KPDFYKAWYNRGGTLGELGYFEEAIASFDKAIEVKPDYQEAWSSKGLALLKLGWLPEAIY 535

Query: 663 ---------------FYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                          +Y + IAL    +       +D   +I+P + E W  R
Sbjct: 536 SYDQALHLEPEDQENWYHRGIALAVGEQFAEAIISYDKALEINPEYHEVWIDR 588


>gi|75908429|ref|YP_322725.1| hypothetical protein Ava_2212 [Anabaena variabilis ATCC 29413]
 gi|75702154|gb|ABA21830.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 1276

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/271 (25%), Positives = 120/271 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+     G  + AI+ ++Q ++ +P   E    RG           AI+ + +AI+  P
Sbjct: 381 QGLQLAKTGDLSGAIANYEQAIQLNPNSYEYWFNRGLTLFHLERFVEAIASYDQAIEIKP 440

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG     LG   EA+  L +A+  +P+       +G    K      A+   
Sbjct: 441 DYYKAWYNRGGTLGQLGLYEEAVASLKQAITIQPDMPGAWSSKGWAELKLGQIGEAIASY 500

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + L  E++  + Y G+AL    +Y+ A +++ KA+++  +F E W        +L  
Sbjct: 501 DEALLLSPEDQENWYYRGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLKQ 560

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+    Q L I   F  A++ RG+ L  LG  ++AI      + I P      Y +A
Sbjct: 561 WSEAIASWDQALSIQADFYLAWYNRGVALENLGHREEAIASYKQAIAIKPDFHLAWYNQA 620

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                +  + EAI  YD AL ++LD  E ++
Sbjct: 621 VALFYLERFLEAIVCYDNALQIKLDYWEAWI 651



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 78/172 (45%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L  +G+   K  D + A+ +    ++L+  +   +   GL L  +  + +A  ++ +AI+
Sbjct: 378 LFYQGLQLAKTGDLSGAIANYEQAIQLNPNSYEYWFNRGLTLFHLERFVEAIASYDQAIE 437

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +  ++ +AW +       L   E+A+  L+Q + I      A+  +G     LGQ  +AI
Sbjct: 438 IKPDYYKAWYNRGGTLGQLGLYEEAVASLKQAITIQPDMPGAWSSKGWAELKLGQIGEAI 497

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                 L + P + E  Y R        +Y  AI  YD AL+++ D  E ++
Sbjct: 498 ASYDEALLLSPEDQENWYYRGIALGVDEQYEAAIDSYDKALEIQPDFHEVWI 549



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 34/203 (16%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG      G Y  A++   Q +   P  P A   +G A     ++  AI+ + EA+  +
Sbjct: 448 NRGGTLGQLGLYEEAVASLKQAITIQPDMPGAWSSKGWAELKLGQIGEAIASYDEALLLS 507

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E W  RG A     +   AI    KALE +P+  ++  +RG+V F  K ++ A+  
Sbjct: 508 PEDQENWYYRGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLKQWSEAIAS 567

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGE-------YKKA----EEAHL------------- 541
               + +  +   A+   G+AL ++G        YK+A     + HL             
Sbjct: 568 WDQALSIQADFYLAWYNRGVALENLGHREEAIASYKQAIAIKPDFHLAWYNQAVALFYLE 627

Query: 542 ----------KAIQLDRNFLEAW 554
                      A+Q+  ++ EAW
Sbjct: 628 RFLEAIVCYDNALQIKLDYWEAW 650



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 66/146 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA   + +Y +AI  +D+ L+  P + E  I RG      ++   AI+ + +A+    
Sbjct: 517 RGIALGVDEQYEAAIDSYDKALEIQPDFHEVWIDRGVVLFNLKQWSEAIASWDQALSIQA 576

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  RG A   LG   EAI    +A+  +P+     + + +  F  + F  A+   
Sbjct: 577 DFYLAWYNRGVALENLGHREEAIASYKQAIAIKPDFHLAWYNQAVALFYLERFLEAIVCY 636

Query: 507 SACVKLDKENKSAYTYLGLALSSIGE 532
              +++  +   A+   G A+ ++ E
Sbjct: 637 DNALQIKLDYWEAWIGRGTAIGNLNE 662


>gi|427732169|ref|YP_007078406.1| hypothetical protein Nos7524_5084 [Nostoc sp. PCC 7524]
 gi|427368088|gb|AFY50809.1| hypothetical protein Nos7524_5084 [Nostoc sp. PCC 7524]
          Length = 1273

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/328 (24%), Positives = 148/328 (45%), Gaps = 17/328 (5%)

Query: 362 AKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
            + N+   ++  S +  ++      +G+ Q   G  A AI+ ++Q ++ +P   E    R
Sbjct: 347 GQMNQPPSMSAESSNVLVTAQAWFYQGLQQAKSGDLAGAIASYNQAIQINPNSSEYWFNR 406

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G           AI+ + +A+   P   +AW  RG     LG   EAI   ++A+    +
Sbjct: 407 GLTLFHLENFTEAIASYDQALHLKPDYYKAWYNRGGTLGQLGLFEEAIASFNQAIAIHAD 466

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           + ++   +G    K      A+      + L+  +   + Y G+AL+   +Y++A  ++ 
Sbjct: 467 NPEVWSSKGWAELKLGQITEAIASYDQALLLEPADPENWYYRGIALAVNEQYQQAIASYD 526

Query: 542 KAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           +A+++  +F EAW        +L Q+ + +A+ +KAL            F  A++ RG+ 
Sbjct: 527 RALEIQPDFHEAWIDRGVVLFNLKQWSEAIASWDKALAS-------QPDFYLAWYNRGVA 579

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           L  LG+ K+AI      + I P      Y +A     +  Y EAI  YD AL ++LD  E
Sbjct: 580 LDNLGRRKEAIASYQRAIKIKPDFHLAWYNQAVALFYLERYLEAIVSYDHALQIKLDYWE 639

Query: 655 KFVLQCLAFYQKE---IALYTASKINSE 679
            ++ +  A  Q +   ++L T   IN++
Sbjct: 640 AWIGRGTAAGQIDSDNLSLLTTIVINNQ 667



 Score = 40.0 bits (92), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 15/192 (7%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    ++  I  DF    + RG+   N  +++ AI+ +D+ L   P +  A   RG A 
Sbjct: 521 AIASYDRALEIQPDFHEAWIDRGVVLFNLKQWSEAIASWDKALASQPDFYLAWYNRGVAL 580

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                 + AI+ +  AI+  P    AW  +  A   L   +EAI     AL+ + +  + 
Sbjct: 581 DNLGRRKEAIASYQRAIKIKPDFHLAWYNQAVALFYLERYLEAIVSYDHALQIKLDYWEA 640

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
              RG    +    N +   L   + ++ +  +  TY G     I  Y++     LK I+
Sbjct: 641 WIGRGTAAGQIDSDNLS---LLTTIVINNQALNQGTYTG----KIASYEEG----LKYIR 689

Query: 546 LDRNFLEAWGHL 557
            D +  E WG L
Sbjct: 690 PDTH-PEGWGRL 700


>gi|376005819|ref|ZP_09783211.1| hypothetical protein (secreted) [Arthrospira sp. PCC 8005]
 gi|375325809|emb|CCE18964.1| hypothetical protein (secreted) [Arthrospira sp. PCC 8005]
          Length = 631

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 148/322 (45%), Gaps = 8/322 (2%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           I+ DF L +G A +NE +Y  AI+  D+ L+ +P   EA   +G A    ++   A+  +
Sbjct: 267 IADDF-LKKGEALINERQYKQAIAACDRALEINPDLDEAWYQKGNALVRLQQYSQALECY 325

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
             A++  P   +AW  RG     L     A++  ++AL+ EPN   + H RG +  KF+ 
Sbjct: 326 DRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNRALKIEPNDYAVWHNRGALLRKFQK 385

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  A+E     + L+  +   +   G  LS +  Y++A  ++ +AIQ++    + W +  
Sbjct: 386 YEQALESYDRAIMLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWANRG 445

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                +    +AL C +Q + ++ +  + +  +G +L  L ++++A+      +     +
Sbjct: 446 MALCHIHQYSEALSCYEQAISLNSKDPELWISQGGVLVKLARYEEALICYDRAISFKSDS 505

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
            E    R     A+ +Y +A+ ++D  + L+ D+ +       A+ Q+ I L    + + 
Sbjct: 506 YEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQ-------AWCQRGICLEKMEQHDD 558

Query: 679 EFCWFDIDGDIDPLFKEYWCKR 700
               FD    + P   E W  R
Sbjct: 559 AIACFDTAIALKPDHAESWRHR 580



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 120/284 (42%), Gaps = 2/284 (0%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAF 427
           C  R  K +    D   +RG   V   +Y+ A+  +++ LK +P        RG   R F
Sbjct: 324 CYDRALKIQPQRSDAWYNRGNVLVRLKRYSPALEAYNRALKIEPNDYAVWHNRGALLRKF 383

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q+  E A+  +  AI    +  E W  RG   + L    EAI    +A++  P   DI  
Sbjct: 384 QK-YEQALESYDRAIMLEANHYETWHNRGNVLSQLKRYQEAISSYDRAIQINPGQFDIWA 442

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG+       ++ A+      + L+ ++   +   G  L  +  Y++A   + +AI   
Sbjct: 443 NRGMALCHIHQYSEALSCYEQAISLNSKDPELWISQGGVLVKLARYEEALICYDRAISFK 502

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +  EAW    +    L   E+AL    +V+ +     +A+  RG+ L  + QH  AI  
Sbjct: 503 SDSYEAWMGRGEILTALKQYEQALANWDRVIALQPDAYQAWCQRGICLEKMEQHDDAIAC 562

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
             + + + P + E    R +    + +Y+EAI     A+ ++ D
Sbjct: 563 FDTAIALKPDHAESWRHRGALLSRLKKYQEAIASLGKAISIQKD 606


>gi|428202816|ref|YP_007081405.1| tetratricopeptide repeat protein,protein kinase family protein
           [Pleurocapsa sp. PCC 7327]
 gi|427980248|gb|AFY77848.1| tetratricopeptide repeat protein,protein kinase family protein
           [Pleurocapsa sp. PCC 7327]
          Length = 739

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 5/280 (1%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A++ ++Q LK  P Y EA  G+G     Q+  + ++  + +AIQ  P+  +    R 
Sbjct: 373 YDRALAAYEQALKIRPEYGEAWQGKGDVFQAQKRYKESLIAYEKAIQIQPNRWQPRLGRA 432

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
           Q    LG++ EAI+   K ++ +PN A+       V  +   ++ A+      +K+  EN
Sbjct: 433 QVLDKLGKNQEAIETYKKVIKIKPNLAEAWLGLAQVQMELNQYSEAIASYDRLLKMQPEN 492

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A+   G A  ++ EY+KA +++ KA+ +  +   AW        +L   EKA+E   +
Sbjct: 493 SLAWYQQGWAWQNLREYEKAIKSYDKAVDIKPDLSSAWYQKGNVLMNLEEYEKAVEAYAK 552

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            +    +  +A++ +G+ L  LG++++AI   S    +  +  +  Y +    H +  Y 
Sbjct: 553 AVQFQPKLHQAWYSQGIALSKLGRNEEAIAAYSQATQVKSNYAQAWYQKGWMLHQLKRYE 612

Query: 637 EAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
           EAI  YD  + L     + +     VL  L  Y+  IA Y
Sbjct: 613 EAISAYDTVIRLRPSDYQAWYNKGNVLYNLGNYEGAIAAY 652



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 134/291 (46%), Gaps = 5/291 (1%)

Query: 366 KKFCVTRISKSKSISVDF-----RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           K++  + I+  K+I +       RL R       GK   AI  + +++K  P   EA +G
Sbjct: 405 KRYKESLIAYEKAIQIQPNRWQPRLGRAQVLDKLGKNQEAIETYKKVIKIKPNLAEAWLG 464

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
               +    +   AI+ +   ++  P    AW ++G A   L E  +AI+   KA++ +P
Sbjct: 465 LAQVQMELNQYSEAIASYDRLLKMQPENSLAWYQQGWAWQNLREYEKAIKSYDKAVDIKP 524

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           + +   +++G V    +++  AVE  +  V+   +   A+   G+ALS +G  ++A  A+
Sbjct: 525 DLSSAWYQKGNVLMNLEEYEKAVEAYAKAVQFQPKLHQAWYSQGIALSKLGRNEEAIAAY 584

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +A Q+  N+ +AW         L   E+A+     V+ +     +A++ +G +L+ LG 
Sbjct: 585 SQATQVKSNYAQAWYQKGWMLHQLKRYEEAISAYDTVIRLRPSDYQAWYNKGNVLYNLGN 644

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           ++ AI      + I+    +    + +    +  Y EA+  YD AL  + D
Sbjct: 645 YEGAIAAYKQTVAIERDYYQAWNSQGNALLLLKRYDEAVNAYDRALRYQPD 695



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 5/197 (2%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N+A  L+ +G + ++ KD++ A+      +K+  E   A+   G    +   YK++  A+
Sbjct: 355 NNATDLYRQGNILYELKDYDRALAAYEQALKIRPEYGEAWQGKGDVFQAQKRYKESLIAY 414

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            KAIQ+  N  +      Q    L  +++A+E  ++V+ I    ++A+     +   L Q
Sbjct: 415 EKAIQIQPNRWQPRLGRAQVLDKLGKNQEAIETYKKVIKIKPNLAEAWLGLAQVQMELNQ 474

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF---- 656
           + +AI      L + P N    Y +   +  + EY +AIK YD A+D++ D    +    
Sbjct: 475 YSEAIASYDRLLKMQPENSLAWYQQGWAWQNLREYEKAIKSYDKAVDIKPDLSSAWYQKG 534

Query: 657 -VLQCLAFYQKEIALYT 672
            VL  L  Y+K +  Y 
Sbjct: 535 NVLMNLEEYEKAVEAYA 551



 Score = 46.6 bits (109), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 34/167 (20%), Positives = 75/167 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G   +N  +Y  A+  + + ++  P   +A   +G A +     E AI+ +++A Q   
Sbjct: 533 KGNVLMNLEEYEKAVEAYAKAVQFQPKLHQAWYSQGIALSKLGRNEEAIAAYSQATQVKS 592

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  +AW ++G     L    EAI      +   P+     + +G V +   ++  A+   
Sbjct: 593 NYAQAWYQKGWMLHQLKRYEEAISAYDTVIRLRPSDYQAWYNKGNVLYNLGNYEGAIAAY 652

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
              V ++++   A+   G AL  +  Y +A  A+ +A++   ++ +A
Sbjct: 653 KQTVAIERDYYQAWNSQGNALLLLKRYDEAVNAYDRALRYQPDYRQA 699



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +++++ KA+ I   L +  Y+  ++         LE ++  +    KA+Q  P L QA+ 
Sbjct: 512 AIKSYDKAVDIKPDLSSAWYQKGNVL------MNLEEYEKAVEAYAKAVQFQPKLHQAWY 565

Query: 108 LKGCAFSALGRKEEALSVWEKG------YEHALHQSA-DLKQFLELEELLTA 152
            +G A S LGR EEA++ + +       Y  A +Q    L Q    EE ++A
Sbjct: 566 SQGIALSKLGRNEEAIAAYSQATQVKSNYAQAWYQKGWMLHQLKRYEEAISA 617


>gi|383774716|ref|YP_005453785.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
 gi|381362843|dbj|BAL79673.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
          Length = 461

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 5/290 (1%)

Query: 331 SSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
            +I D  S+ S++  + L  + D    TS    +  +     I+     +  +RL   + 
Sbjct: 57  GAIIDQASNPSSDRAAALLVRADANARTSGGLTQALRDIDRAIALDGRNAKAWRLRGDLL 116

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           +   G    A +   + ++ DP   E+   RG     QR L+ A++D+ +AI+  P   +
Sbjct: 117 REAGGDLNRAAADLSKAIELDPQDAESYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQ 176

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           AW  RG      G++ +A++DLS+AL  +PN       RG    K    + AV D    +
Sbjct: 177 AWSDRGVTYYLGGDNEKAVRDLSEALRLDPNRPRSYTNRGAAYKKLGQLDKAVADDGEAI 236

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQDLANSE 568
           +LD +    Y   GL+L+++GEY KA   + +A++L    NF    G       +L    
Sbjct: 237 RLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFTNRGDSYHLKGELG--- 293

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            AL   +  L +D  F++ Y+ R +L   +G+ +KA+ D  + L +DP N
Sbjct: 294 AALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALRLDPGN 343



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 1/187 (0%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           G   +A++D+ +A+  +  +A     RG ++     D N A  DLS  ++LD ++  +Y 
Sbjct: 86  GGLTQALRDIDRAIALDGRNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAESYE 145

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G+  ++     +A   + +AI+L  +  +AW      Y    ++EKA+  L + L +D
Sbjct: 146 LRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVTYYLGGDNEKAVRDLSEALRLD 205

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
               ++Y  RG     LGQ  KA+ D    + +DP   E    R     A+GEY +AI D
Sbjct: 206 PNRPRSYTNRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIAD 265

Query: 642 YDAALDL 648
           YD AL L
Sbjct: 266 YDQALRL 272



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 7/194 (3%)

Query: 502 AVEDLSACVKLDKENKSAYTYLG-LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           A+ D+   + LD  N  A+   G L   + G+  +A     KAI+LD    E++      
Sbjct: 91  ALRDIDRAIALDGRNAKAWRLRGDLLREAGGDLNRAAADLSKAIELDPQDAESYELRGVV 150

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y +    ++AL    Q + +    ++A+  RG+  +  G ++KA++DLS  L +DP+   
Sbjct: 151 YTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVTYYLGGDNEKAVRDLSEALRLDPNRPR 210

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TAS 674
               R + Y  +G+  +A+ D   A+ L+    E +      L  +  Y K IA Y  A 
Sbjct: 211 SYTNRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQAL 270

Query: 675 KINSEFCWFDIDGD 688
           ++     +F   GD
Sbjct: 271 RLAPRPNFFTNRGD 284



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 1/134 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G+   A++   + ++ DP  PE    RG + A   E + AI+D+ +A++  
Sbjct: 214 NRGAAYKKLGQLDKAVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLA 273

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG +    GE   A+ D   AL+ +PN A   + R ++  K  +   A+ D
Sbjct: 274 PRP-NFFTNRGDSYHLKGELGAALSDYESALKLDPNFAQTYNNRAVLYKKMGERRKALAD 332

Query: 506 LSACVKLDKENKSA 519
               ++LD  N +A
Sbjct: 333 YETALRLDPGNDNA 346



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 1/116 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG++    G+Y  AI+ +DQ L+  P  P     RG +   + EL AA+SD+  A++ +
Sbjct: 248 NRGLSLAAMGEYDKAIADYDQALRLAPR-PNFFTNRGDSYHLKGELGAALSDYESALKLD 306

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           P+  + +  R      +GE  +A+ D   AL  +P + +  + R  +  +   F A
Sbjct: 307 PNFAQTYNNRAVLYKKMGERRKALADYETALRLDPGNDNAANGRRAMIAEIAKFGA 362


>gi|21228822|ref|NP_634744.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
 gi|20907343|gb|AAM32416.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
          Length = 1129

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 133/576 (23%), Positives = 246/576 (42%), Gaps = 71/576 (12%)

Query: 80   SQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
            S+L  +K  ++  D+A+ LD     A+  K  A + +GR E+++  +++  E A   SA+
Sbjct: 480  SKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSIVCYDRVLEVA-PDSAE 538

Query: 140  L--KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKM-----SETSENH 192
            +   + L L+EL    +   +  C        S+ +V+   LN + +M     +  S N+
Sbjct: 539  IWYNKGLLLDEL---GRYQEASDCYSQALQINSNYSVARFRLNKDIEMLSGNLTSISANN 595

Query: 193  NKSDICDSSSQSRDV-SETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVS 251
              ++I    + +    S   S     PD                       I+G ++++S
Sbjct: 596  KNTNINPQKAITGGFWSYLLSYKYASPD-------------------DNTEISGSIKDLS 636

Query: 252  E--NHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHD 309
                ++ +  G  ST++  +  E +   S D  +   P+   +  E+            D
Sbjct: 637  PEFGYDEAWYGKASTYSKLEMYE-DALHSYDMALAINPVRTEAWYEKGS--------ALD 687

Query: 310  KLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFC 369
            KL     +L       E Y K+   D +SS++          W  +  TS++  R ++  
Sbjct: 688  KLGRSEEAL-------ECYQKALDIDPQSSNA----------WYGMASTSSDLGRAEEAI 730

Query: 370  VT--RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
                ++ K  S   +    + +A  + G+Y  A++ F+ +L+ +P   EAL GR  A A 
Sbjct: 731  AYYDQLLKLNSTDSEALQGKSLALASLGRYDEAVACFNPLLELEPENVEALEGRAFALAR 790

Query: 428  QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
                EAA+ D+   ++ +P+  +A   +      LG   EA     + LE  P + +I++
Sbjct: 791  SGRPEAALEDYDVIMKLDPTNSKALSEKASLLEELGRYDEAASTYGEILEITPENREIMY 850

Query: 488  ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
             +G       DF AA+      + LD +N  A    G ALS + +Y++A   + KA++ D
Sbjct: 851  RQGKALEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYD 910

Query: 548  RNFLEAWGHLTQFYQDLAN-----SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
             +   AW     +++  AN     +  ALEC  + + +      A++ +G L + LG   
Sbjct: 911  PDNPAAW-----YFKGCANFAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVN 965

Query: 603  KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            ++I    S L IDP +   LY +   ++ I EY EA
Sbjct: 966  ESINSYESALEIDPDSPSALYNKRFSHYRIKEYDEA 1001



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 132/281 (46%), Gaps = 4/281 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  +I+ +D  ++  P+  E+   +G      +    AI+ + +++ ++      W ++
Sbjct: 111 KYEESIACYDMAIETFPVSSESWYKKGDEYLQTKNYIEAINCYEKSLATDNYLSRVWFQK 170

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
             A   LG   EA+     +++F  NS+  L  +G    + +++  A+   +  + +  E
Sbjct: 171 ATASEKLGLDQEALTSYDTSIQFGTNSSKALQMQGKAYAQLENYEEAMNCFNRALNVTPE 230

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +   +   G+     G+Y+ A E + +AI L+ + +EAW +     + +   + AL C +
Sbjct: 231 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 290

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            VL  +     A   +GL L  LG++++A++     L   P N E  Y + S  +A+G+Y
Sbjct: 291 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 350

Query: 636 REAIKDYDAALD----LELDSMEKFVLQCLAFYQKEIALYT 672
             AI  YD AL+    +E+      +L+ L  Y   + +Y+
Sbjct: 351 DAAIICYDRALNPDAGIEIQEAGDSLLESLKVYDSSLPVYS 391



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 150/354 (42%), Gaps = 43/354 (12%)

Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           DF L   +GI     G Y SAI  +DQ +  +P   EA   +G         + A++ + 
Sbjct: 231 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 290

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
             + S P    A +++G     LG + EA+Q   + L + P++ +  + +G V      +
Sbjct: 291 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 350

Query: 500 NAAV-------------------EDLSACVKLDKENKSAYTYL--------------GLA 526
           +AA+                   + L   +K+   +   Y+ +              G+A
Sbjct: 351 DAAIICYDRALNPDAGIEIQEAGDSLLESLKVYDSSLPVYSEVPEFKSPAVKIWYDKGMA 410

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
             ++G Y+ A E + K ++ + +    W         L  S +A+ C  + L +D  ++K
Sbjct: 411 FDNLGNYESALECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAK 470

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            ++ +G     LG++K A+K     + +D +     Y +A     IG Y ++I  YD  L
Sbjct: 471 VWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSIVCYDRVL 530

Query: 647 DLELDSME-----KFVLQCLAFYQKEIALYT-ASKINSEF--CWFDIDGDIDPL 692
           ++  DS E       +L  L  YQ+    Y+ A +INS +    F ++ DI+ L
Sbjct: 531 EVAPDSAEIWYNKGLLLDELGRYQEASDCYSQALQINSNYSVARFRLNKDIEML 584



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/305 (21%), Positives = 128/305 (41%), Gaps = 7/305 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A    G+   A+  + + L  DP    A  G  +  +     E AI+ + + ++ N 
Sbjct: 682 KGSALDKLGRSEEALECYQKALDIDPQSSNAWYGMASTSSDLGRAEEAIAYYDQLLKLNS 741

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA + +  A A+LG   EA+   +  LE EP + + L  R     +     AA+ED 
Sbjct: 742 TDSEALQGKSLALASLGRYDEAVACFNPLLELEPENVEALEGRAFALARSGRPEAALEDY 801

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +KLD  N  A +     L  +G Y +A   + + +++     E      +  + + +
Sbjct: 802 DVIMKLDPTNSKALSEKASLLEELGRYDEAASTYGEILEITPENREIMYRQGKALEAMGD 861

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A+ C  ++L +D +   A + +G  L  + ++++A+      L  DP N    Y + 
Sbjct: 862 FEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYFKG 921

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
               AI     A++ ++  + L+ D +        A+Y K         +N     ++  
Sbjct: 922 CANFAISSNNAALECFNKTVQLKPDCI-------TAWYNKGYLANVLGDVNESINSYESA 974

Query: 687 GDIDP 691
            +IDP
Sbjct: 975 LEIDP 979



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 145/351 (41%), Gaps = 48/351 (13%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A      Y  A++ F++ L   P   E    +G       + E+AI  + +AI  NP
Sbjct: 204 QGKAYAQLENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISLNP 263

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF----EPNSADILHERGIVNFKFKDFNAA 502
              EAW  +G       E +E  QD     EF    EP +   L ++G+   +      A
Sbjct: 264 DLVEAWYNKGMDL----ERMEMYQDALTCYEFVLLSEPENLSALQKKGLCLERLGRNEEA 319

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEY-------------------KKAEEAHLKA 543
           ++     +    +N  A+   G  L+++G+Y                   ++A ++ L++
Sbjct: 320 LQCYDEILVYSPDNTEAWYSKGSVLNAMGQYDAAIICYDRALNPDAGIEIQEAGDSLLES 379

Query: 544 IQLDRNFLEAWGHLTQF--------------YQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +++  + L  +  + +F              + +L N E ALEC  +VL  +   +  ++
Sbjct: 380 LKVYDSSLPVYSEVPEFKSPAVKIWYDKGMAFDNLGNYESALECYNKVLETEPDHAIIWY 439

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            +GL L  L +  +A+      L +D    +  Y +      +G+Y++A+K YD A+DL+
Sbjct: 440 QKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDLD 499

Query: 650 LDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
               E +    LA+Y K  AL    +       +D   ++ P   E W  +
Sbjct: 500 ----ENYT---LAWYGKAFALAKIGRYEDSIVCYDRVLEVAPDSAEIWYNK 543



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 131/314 (41%), Gaps = 7/314 (2%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A+  +D  L  +P+  EA   +G+A       E A+  + +A+  +P +  AW    
Sbjct: 658 YEDALHSYDMALAINPVRTEAWYEKGSALDKLGRSEEALECYQKALDIDPQSSNAWYGMA 717

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
              + LG + EAI    + L+     ++ L  + +       ++ AV   +  ++L+ EN
Sbjct: 718 STSSDLGRAEEAIAYYDQLLKLNSTDSEALQGKSLALASLGRYDEAVACFNPLLELEPEN 777

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A      AL+  G  + A E +   ++LD    +A        ++L   ++A     +
Sbjct: 778 VEALEGRAFALARSGRPEAALEDYDVIMKLDPTNSKALSEKASLLEELGRYDEAASTYGE 837

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
           +L I     +  + +G  L  +G  + AI      L +DP NI+ +  +      + +Y+
Sbjct: 838 ILEITPENREIMYRQGKALEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQ 897

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEY 696
           EA+  YD AL+ + D+         A+Y K  A +  S  N+    F+    + P     
Sbjct: 898 EALATYDKALEYDPDNPA-------AWYFKGCANFAISSNNAALECFNKTVQLKPDCITA 950

Query: 697 WCKRLHPKNVCEKV 710
           W  + +  NV   V
Sbjct: 951 WYNKGYLANVLGDV 964



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 124/272 (45%), Gaps = 3/272 (1%)

Query: 378 SISVDFRLSRGIAQVN---EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           S +  F  + G A+     EG+   A S  D++L + P   E L+ +G      +E E +
Sbjct: 22  SFTSGFLPAAGAAEAQKNLEGEEVPAASTRDEVLSQRPSSVEGLLTKGNDLYSLKEYELS 81

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I  F +A++  P++  AW  +G + +AL +  E+I     A+E  P S++  +++G    
Sbjct: 82  IGCFEKALEIEPNSSMAWYGKGCSLSALEKYEESIACYDMAIETFPVSSESWYKKGDEYL 141

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           + K++  A+      +  D      +     A   +G  ++A  ++  +IQ   N  +A 
Sbjct: 142 QTKNYIEAINCYEKSLATDNYLSRVWFQKATASEKLGLDQEALTSYDTSIQFGTNSSKAL 201

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
               + Y  L N E+A+ C  + L +     + ++ +G++    G ++ AI+     + +
Sbjct: 202 QMQGKAYAQLENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISL 261

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           +P  +E  Y +      +  Y++A+  Y+  L
Sbjct: 262 NPDLVEAWYNKGMDLERMEMYQDALTCYEFVL 293



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 126/280 (45%), Gaps = 15/280 (5%)

Query: 350 FKWDMLKETSN-EAKRNKKFCVTRISKSKSI-------------SVDFRLSRGIAQVNEG 395
           +++ +L E  N  A + K  C+ R+ +++               + +   S+G      G
Sbjct: 289 YEFVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMG 348

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y +AI  +D+ L  D        G     +  +  ++++  ++E  +    A + W  +
Sbjct: 349 QYDAAIICYDRALNPDAGIEIQEAGDSLLESL-KVYDSSLPVYSEVPEFKSPAVKIWYDK 407

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   LG    A++  +K LE EP+ A I +++G+   +      AV      +KLD  
Sbjct: 408 GMAFDNLGNYESALECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSG 467

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
               +   G   S +G+YK A +++ +AI LD N+  AW         +   E ++ C  
Sbjct: 468 YAKVWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSIVCYD 527

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           +VL +    ++ ++ +GLLL  LG++++A    S  L I+
Sbjct: 528 RVLEVAPDSAEIWYNKGLLLDELGRYQEASDCYSQALQIN 567



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 5/146 (3%)

Query: 369  CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
            C  +I      ++D   ++G A     KY  A++ +D+ L+ DP  P A   +G A    
Sbjct: 868  CYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYFKGCANFAI 927

Query: 429  RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
                AA+  F + +Q  P    AW  +G     LG+  E+I     ALE +P+S   L+ 
Sbjct: 928  SSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSYESALEIDPDSPSALYN 987

Query: 489  RGIVNFKFKDFNAAVEDLSAC-VKLD 513
            +   +++ K+++ A    S C  KLD
Sbjct: 988  KRFSHYRIKEYDEA----SVCKAKLD 1009



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 148/375 (39%), Gaps = 56/375 (14%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  ++ +++         +G+      K A A+  +D+ LK D  Y +    +G   +  
Sbjct: 423 CYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKL 482

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + A+  + EAI  + +   AW  +  A A +G   ++I    + LE  P+SA+I + 
Sbjct: 483 GKYKDAVKSYDEAIDLDENYTLAWYGKAFALAKIGRYEDSIVCYDRVLEVAPDSAEIWYN 542

Query: 489 RGIV----------------------NFKFKDF--NAAVEDLSA-CVKLDKENKSAY--- 520
           +G++                      N+    F  N  +E LS     +   NK+     
Sbjct: 543 KGLLLDELGRYQEASDCYSQALQINSNYSVARFRLNKDIEMLSGNLTSISANNKNTNINP 602

Query: 521 --TYLGLALSSIGEYKKAEE-------AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
                G   S +  YK A           +K +  +  + EAW      Y  L   E AL
Sbjct: 603 QKAITGGFWSYLLSYKYASPDDNTEISGSIKDLSPEFGYDEAWYGKASTYSKLEMYEDAL 662

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
                 L I+   ++A++ +G  L  LG+ ++A++     L IDP +    Y  AS    
Sbjct: 663 HSYDMALAINPVRTEAWYEKGSALDKLGRSEEALECYQKALDIDPQSSNAWYGMASTSSD 722

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +G   EAI  YD    L+L+S +   LQ      K +AL +  + +     F      +P
Sbjct: 723 LGRAEEAIAYYDQL--LKLNSTDSEALQ-----GKSLALASLGRYDEAVACF------NP 769

Query: 692 LFKEYWCKRLHPKNV 706
           L +      L P+NV
Sbjct: 770 LLE------LEPENV 778



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 81/164 (49%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G A    G + +AI+ +D+IL  DP   +A+  +G A +   + + A++ + +A++ +P
Sbjct: 852  QGKALEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDP 911

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                AW  +G A  A+  +  A++  +K ++ +P+     + +G +     D N ++   
Sbjct: 912  DNPAAWYFKGCANFAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSY 971

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
             + +++D ++ SA      +   I EY +A     K   LD +F
Sbjct: 972  ESALEIDPDSPSALYNKRFSHYRIKEYDEASVCKAKLDSLDPDF 1015



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 43/210 (20%), Positives = 95/210 (45%), Gaps = 6/210 (2%)

Query: 446 PSAGEAWKRRGQARAAL-GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           P+AG A     +A+  L GE V A     + L   P+S + L  +G   +  K++  ++ 
Sbjct: 29  PAAGAA-----EAQKNLEGEEVPAASTRDEVLSQRPSSVEGLLTKGNDLYSLKEYELSIG 83

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++++  +  A+   G +LS++ +Y+++   +  AI+      E+W      Y   
Sbjct: 84  CFEKALEIEPNSSMAWYGKGCSLSALEKYEESIACYDMAIETFPVSSESWYKKGDEYLQT 143

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N  +A+ C ++ L  D   S+ +  +      LG  ++A+    + +    ++ + L +
Sbjct: 144 KNYIEAINCYEKSLATDNYLSRVWFQKATASEKLGLDQEALTSYDTSIQFGTNSSKALQM 203

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSME 654
           +   Y  +  Y EA+  ++ AL++  +  E
Sbjct: 204 QGKAYAQLENYEEAMNCFNRALNVTPEDFE 233



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 33/55 (60%)

Query: 75  RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           +A  YS+LE+++  +   D AL ++P   +A+  KG A   LGR EEAL  ++K 
Sbjct: 648 KASTYSKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGRSEEALECYQKA 702



 Score = 43.5 bits (101), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 3   KRKLLDSRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSL 62
           K  LL+   R ++   T  EI E+   +  +       +E     ++ ++  AI   D +
Sbjct: 818 KASLLEELGRYDEAASTYGEILEITPENREIMYRQGKALE-----AMGDFEAAIACYDKI 872

Query: 63  LA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEE 121
           LA     I  I N+ F  S++E ++  +   DKAL+ DP    A+  KGCA  A+     
Sbjct: 873 LALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYFKGCANFAISSNNA 932

Query: 122 ALSVWEK 128
           AL  + K
Sbjct: 933 ALECFNK 939



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQD 71
           L +  + I   D+L++++S  + A+  +  LA L SL  + +A+   + LL    E ++ 
Sbjct: 723 LGRAEEAIAYYDQLLKLNSTDSEALQGK-SLA-LASLGRYDEAVACFNPLLELEPENVEA 780

Query: 72  ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
           +  RAF  ++    +  + D D  ++LDPT  +A   K      LGR +EA S +
Sbjct: 781 LEGRAFALARSGRPEAALEDYDVIMKLDPTNSKALSEKASLLEELGRYDEAASTY 835


>gi|392413167|ref|YP_006449774.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
 gi|390626303|gb|AFM27510.1| tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
          Length = 546

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 34/296 (11%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           +N+G+   A++I D I+ ++P    AL+ RG A+  Q E + A+ D+T AI  +P  G A
Sbjct: 49  INKGETGQAVAILDGIMLKNPKEVSALVLRGWAKERQDEYDLALHDYTAAIDLDPDYGSA 108

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W+ RG+  A + +   A++DL +A E +P++A I+   G++ F  +D++ A        +
Sbjct: 109 WEMRGRLLARMEDHEGALRDLKRAAELQPHAAAIVASMGLMRFFEQDYDGARTYFDKSSQ 168

Query: 512 LDKENKSAY-----TYL-----------------------------GLALSSIGEYKKAE 537
           LD + +SAY      YL                             G A    G+ +K+ 
Sbjct: 169 LDPKEESAYFGRTAIYLEKNDFTSAIAEMDKLLQFQPQSAQALFRRGFAYLKSGQPQKSL 228

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           E   KA++LD    E + +    ++ +   +KAL+  Q+   ID   S     +  +L  
Sbjct: 229 EDFDKALELDPEMKEIYWYRADAHRAINALDKALKDYQKAASIDPEDSILLLNQATILMM 288

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
           +G++ +A++ L   + ++P N      RA  Y   G Y  A+KD + AL ++ D +
Sbjct: 289 MGRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTGNYLGALKDLNKALQVQPDDV 344



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 121/281 (43%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S G+ +  E  Y  A + FD+  + DP    A  GR      + +  +AI++  + +Q  
Sbjct: 145 SMGLMRFFEQDYDGARTYFDKSSQLDPKEESAYFGRTAIYLEKNDFTSAIAEMDKLLQFQ 204

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P + +A  RRG A    G+  ++++D  KALE +P   +I   R   +      + A++D
Sbjct: 205 PQSAQALFRRGFAYLKSGQPQKSLEDFDKALELDPEMKEIYWYRADAHRAINALDKALKD 264

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                 +D E+          L  +G Y +A E   ++I L+ +    + +    Y    
Sbjct: 265 YQKAASIDPEDSILLLNQATILMMMGRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTG 324

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N   AL+ L + L +          R  +   + +  KA+ DL S + +DP N E   +R
Sbjct: 325 NYLGALKDLNKALQVQPDDVWLLIKRAHVFKMIARGDKALADLDSVIELDPENHEARLMR 384

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            S Y    +   AI+D   A+DL  +    + L   AF +K
Sbjct: 385 GSLYFNDKQLERAIQDLKIAIDLLPEDAAAYQLLAEAFLKK 425



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 113/252 (44%), Gaps = 10/252 (3%)

Query: 395 GKYASAISIFDQILKEDPMYP-----EALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
           G+Y  A+ +  Q +  +P  P      AL+  GT          A+ D  +A+Q  P   
Sbjct: 290 GRYDEALEMLRQSILLEPDNPLPYTNRALLYLGTGNYL-----GALKDLNKALQVQPDDV 344

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
               +R      +    +A+ DL   +E +P + +    RG + F  K    A++DL   
Sbjct: 345 WLLIKRAHVFKMIARGDKALADLDSVIELDPENHEARLMRGSLYFNDKQLERAIQDLKIA 404

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           + L  E+ +AY  L  A    G+  +A +   +A++ + +F  A+  L + +   ++ ++
Sbjct: 405 IDLLPEDAAAYQLLAEAFLKKGDTPEALKMIGQALKKESSFPAAFVTLGEIHMADSHMDQ 464

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           ALE   + L ID    +A   R  L   L  ++ A++DL      +P + +   LRA CY
Sbjct: 465 ALEAYSRALTIDPNSFEARMRRAELFIELNNYQNAVQDLEHAAKSNPYSGKVYQLRAMCY 524

Query: 630 HAIGEYREAIKD 641
             +G+  +A +D
Sbjct: 525 ETLGDKEKARQD 536



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 93/223 (41%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +  +  G Y  A+   ++ L+  P     LI R          + A++D    I+ +
Sbjct: 315 NRALLYLGTGNYLGALKDLNKALQVQPDDVWLLIKRAHVFKMIARGDKALADLDSVIELD 374

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA   RG       +   AIQDL  A++  P  A           K  D   A++ 
Sbjct: 375 PENHEARLMRGSLYFNDKQLERAIQDLKIAIDLLPEDAAAYQLLAEAFLKKGDTPEALKM 434

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           +   +K +    +A+  LG    +     +A EA+ +A+ +D N  EA     + + +L 
Sbjct: 435 IGQALKKESSFPAAFVTLGEIHMADSHMDQALEAYSRALTIDPNSFEARMRRAELFIELN 494

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N + A++ L+     +    K Y LR +    LG  +KA +DL
Sbjct: 495 NYQNAVQDLEHAAKSNPYSGKVYQLRAMCYETLGDKEKARQDL 537



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 34/178 (19%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS-------AGEAW 452
           A++  D +++ DP   EA + RG+     ++LE AI D   AI   P          EA+
Sbjct: 363 ALADLDSVIELDPENHEARLMRGSLYFNDKQLERAIQDLKIAIDLLPEDAAAYQLLAEAF 422

Query: 453 KRRGQARAAL---GESV------------------------EAIQDLSKALEFEPNSADI 485
            ++G    AL   G+++                        +A++  S+AL  +PNS + 
Sbjct: 423 LKKGDTPEALKMIGQALKKESSFPAAFVTLGEIHMADSHMDQALEAYSRALTIDPNSFEA 482

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
              R  +  +  ++  AV+DL    K +  +   Y    +   ++G+ +KA +   KA
Sbjct: 483 RMRRAELFIELNNYQNAVQDLEHAAKSNPYSGKVYQLRAMCYETLGDKEKARQDLWKA 540


>gi|300868979|ref|ZP_07113583.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300333046|emb|CBN58775.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 328

 Score =  101 bits (252), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 82/323 (25%), Positives = 143/323 (44%), Gaps = 21/323 (6%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            SRG  Q  +G +  AI+ + + +   P + +     G A     + + AI+ + + I+ 
Sbjct: 10  FSRGYLQYEKGDFEGAIAFYKKAIGIQPDFYKVWYNWGEALYELGQYKEAIAAYDKGIEF 69

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   +AW  RG     L    EAI    K+L  +P+  +  + RG+   KF DF  A+ 
Sbjct: 70  KPDLYQAWYSRGNVLYRLRRLGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIA 129

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
                + +  +   A+   G+AL  +G ++ A  ++ KA+ +  ++ EAW       G L
Sbjct: 130 SFDKALAIQPDYHEAWYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMALGKL 189

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
            QF   +A  +KA+E     L IDK   +A++ RG+ L  LG+ + AI      + +   
Sbjct: 190 GQFEGAIAAYDKAIE-----LKIDKH--EAWNNRGIALKNLGRFEDAIASYDRAIELKID 242

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN 677
             E    R    +++  + +AI  +D AL ++ D  E       A+  + +AL     + 
Sbjct: 243 KHEAWINRGIALNSLERFEDAIASFDKALAIKPDYHE-------AWNNRGVALRQLGDLE 295

Query: 678 SEFCWFDIDGDIDPLFKEYWCKR 700
                FD    I P ++E W  R
Sbjct: 296 GAIASFDKALVIKPDYQEAWHNR 318



 Score = 99.4 bits (246), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 7/285 (2%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E    RG  +  + + E AI+ + +AI   P   + W   G+A   LG+  EAI    K 
Sbjct: 7   EEWFSRGYLQYEKGDFEGAIAFYKKAIGIQPDFYKVWYNWGEALYELGQYKEAIAAYDKG 66

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           +EF+P+     + RG V ++ +    A+      + +  +   A+   G+AL   G+++ 
Sbjct: 67  IEFKPDLYQAWYSRGNVLYRLRRLGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFED 126

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A  +  KA+ +  ++ EAW +       L   E A+    + L I   + +A++ RG+ L
Sbjct: 127 AIASFDKALAIQPDYHEAWYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMAL 186

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
             LGQ + AI      + +     E    R      +G + +AI  YD A++L++D  E 
Sbjct: 187 GKLGQFEGAIAAYDKAIELKIDKHEAWNNRGIALKNLGRFEDAIASYDRAIELKIDKHE- 245

Query: 656 FVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                 A+  + IAL +  +       FD    I P + E W  R
Sbjct: 246 ------AWINRGIALNSLERFEDAIASFDKALAIKPDYHEAWNNR 284



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 71/241 (29%), Positives = 109/241 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG       +   AI+ FD+ L   P Y EA   RG A     + E AI+ F +A+   
Sbjct: 79  SRGNVLYRLRRLGEAIASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIASFDKALAIQ 138

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG    AI    KAL  +P+  +  + RG+   K   F  A+  
Sbjct: 139 PDYHEAWYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMALGKLGQFEGAIAA 198

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L  +   A+   G+AL ++G ++ A  ++ +AI+L  +  EAW +       L 
Sbjct: 199 YDKAIELKIDKHEAWNNRGIALKNLGRFEDAIASYDRAIELKIDKHEAWINRGIALNSLE 258

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E A+    + L I   + +A++ RG+ L  LG  + AI      L I P   E  + R
Sbjct: 259 RFEDAIASFDKALAIKPDYHEAWNNRGVALRQLGDLEGAIASFDKALVIKPDYQEAWHNR 318

Query: 626 A 626
           +
Sbjct: 319 S 319



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 3/232 (1%)

Query: 370 VTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           +    KS +I  D+     +RG+A    G +  AI+ FD+ L   P Y EA   RG A  
Sbjct: 94  IASFDKSLAIQPDYHEAWYNRGVALGKFGDFEDAIASFDKALAIQPDYHEAWYNRGVALG 153

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
                E AI+ + +A+   P   EAW  RG A   LG+   AI    KA+E + +  +  
Sbjct: 154 KLGRFEGAIASYDKALVIKPDYHEAWYNRGMALGKLGQFEGAIAAYDKAIELKIDKHEAW 213

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + RGI       F  A+      ++L  +   A+   G+AL+S+  ++ A  +  KA+ +
Sbjct: 214 NNRGIALKNLGRFEDAIASYDRAIELKIDKHEAWINRGIALNSLERFEDAIASFDKALAI 273

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
             ++ EAW +     + L + E A+    + L I   + +A+H R + +  L
Sbjct: 274 KPDYHEAWNNRGVALRQLGDLEGAIASFDKALVIKPDYQEAWHNRSMAISEL 325



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 3/200 (1%)

Query: 370 VTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           +    K+ +I  D+     +RG+A    G++  AI+ +D+ L   P Y EA   RG A  
Sbjct: 128 IASFDKALAIQPDYHEAWYNRGVALGKLGRFEGAIASYDKALVIKPDYHEAWYNRGMALG 187

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
              + E AI+ + +AI+      EAW  RG A   LG   +AI    +A+E + +  +  
Sbjct: 188 KLGQFEGAIAAYDKAIELKIDKHEAWNNRGIALKNLGRFEDAIASYDRAIELKIDKHEAW 247

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
             RGI     + F  A+      + +  +   A+   G+AL  +G+ + A  +  KA+ +
Sbjct: 248 INRGIALNSLERFEDAIASFDKALAIKPDYHEAWNNRGVALRQLGDLEGAIASFDKALVI 307

Query: 547 DRNFLEAWGHLTQFYQDLAN 566
             ++ EAW + +    +L++
Sbjct: 308 KPDYQEAWHNRSMAISELSD 327


>gi|20090471|ref|NP_616546.1| hypothetical protein MA1613 [Methanosarcina acetivorans C2A]
 gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1885

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 144/319 (45%), Gaps = 7/319 (2%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           I+ D    RG+  V   +Y  AI+ F++IL +DP + EAL  RG A     + + A+  F
Sbjct: 3   ITNDEAFQRGLDLVKRKRYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSF 62

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
            +A+Q  P   +A  R+G   AALG   EA++    ALE  P++ +I +  G+   + + 
Sbjct: 63  NDALQLEPGNSDALYRKGTCFAALGRFEEALEAYESALESSPDTPEIWYMMGLAFAEMER 122

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
             A++      ++L  E  +A   +G        Y++A E   +A+++     EAW    
Sbjct: 123 AEASILCFEKALELKPEYTAACCAMGTVAGKAERYEEALEDFERALEISPRNSEAWYAKG 182

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                +   E ALEC   ++    + + A   + L+L  LG++++A+  L   L   P+N
Sbjct: 183 LILAKIEKYENALECFDFLIREKPKDTAALEQKCLILANLGKNEEALGALEDFLKKFPAN 242

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
              LY +      +  Y +A +     L L     E       A+++K  AL    ++N 
Sbjct: 243 EAALYHKGILLSELSRYEDAERTISKVLKLNPGHRE-------AWFRKGFALVQLLRLNE 295

Query: 679 EFCWFDIDGDIDPLFKEYW 697
               FD    +DP + E W
Sbjct: 296 AIEAFDEAIRLDPAYFEAW 314



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 4/276 (1%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
               + K+    +D   +RGI+ +  G+  +A+   ++++   P YP+     G A    
Sbjct: 571 AFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLEKVVSLSPDYPDLAYSLGVALMEL 630

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            ELE A+  F +    NP   E   R+G+    LGE   A+Q   K L  +P S +  + 
Sbjct: 631 GELEKALETFEKLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEKVLLEKPGSREAWYR 690

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAY----TYLGLALSSIGEYKKAEEAHLKAI 544
           +G+     + F  AV+     +  +     +Y    T  G A   +G +  A E    A+
Sbjct: 691 KGLALLNMERFEDAVKAFDEVIVRNTTKDPSYEDAGTLKGFAQMQLGNFLPALETFEGAL 750

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           + + +    W +     Q+L   E+A    +  L ++  FS A+  R + L   GQ++ A
Sbjct: 751 EKNPDSGITWYYKGLTLQELQRQEEAARAFESALRLNPEFSDAFEYRAVCLFKTGQYETA 810

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           ++ L + L  DP N+  L  RA C+  +G ++EA++
Sbjct: 811 LEALEALLENDPENLSTLNSRAICFLELGRHKEAVE 846



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 118/262 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +GI      +Y  A     ++LK +P + EA   +G A      L  AI  F EAI+ +P
Sbjct: 249 KGILLSELSRYEDAERTISKVLKLNPGHREAWFRKGFALVQLLRLNEAIEAFDEAIRLDP 308

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EAW  +  A   L    EA++     LE  P+  +I + R +   K ++F  A    
Sbjct: 309 AYFEAWNYKCFALMKLEVYEEALEAFDTILETYPDMEEIWYNRALALLKLQNFPEAARSF 368

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +   +LD  N  A+   G  L+  G+Y++A E   + ++   +F EA          L  
Sbjct: 369 ARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYHPDFTEAQKFRGTVLTGLGR 428

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+ALE L + L  +      +  +GLLL  +G+ + A++   +  G+ P +  C   R 
Sbjct: 429 FEEALESLTKSLEKEPENYNMWIQKGLLLLDIGKFEPALEAFENAAGLKPDDEICWMNRG 488

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
              +++  Y EA++ +   L L
Sbjct: 489 FALYSLECYEEALEAFKEGLHL 510



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 131/285 (45%), Gaps = 15/285 (5%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPM-----YPEALIGRGTARAFQRELEAAISDFTEAI 442
            G+AQ+   +Y  A   F++IL+++P      Y   L+ RG  +      E A+  F +A+
Sbjct: 1462 GLAQLKTRRYEDAFDTFEKILEKNPTDADVWYLSGLVMRGLDQN-----EEAVEVFEKAL 1516

Query: 443  QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
            + NP+   A +++G    AL    EA      AL   P + DIL+ R + ++K  DF  A
Sbjct: 1517 ELNPALTAALEQKGLGLLALCRYEEARDAFGSALALNPENVDILYSRAVASYKLLDFEEA 1576

Query: 503  VEDLSACV----KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
             +DL   +          K+ Y  LG+A   + +Y++A +A    ++ +    +A  ++ 
Sbjct: 1577 SKDLERLLLFAPGFPDYTKACYM-LGIASIELQDYERALQALDLVLEREPAHRDALYNMA 1635

Query: 559  QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                +L   E+A    +Q+L       ++ +  GL L  L   K+A+K        +P N
Sbjct: 1636 LVLFNLEEYEEAARTFEQLLEASPEDPESLNYLGLCLLELEDLKEALKAFEKAALFNPKN 1695

Query: 619  IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
             E LY  A+    +   +E++  +D  L++  ++ +    + +AF
Sbjct: 1696 EEALYNAATTLIKLNRIQESLGYFDRILEISPENYDAMNYKGVAF 1740



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 117/259 (45%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+  F++ L+  P   EA   +G   A   + E A+  F   I+  P    A +++
Sbjct: 156 RYEEALEDFERALEISPRNSEAWYAKGLILAKIEKYENALECFDFLIREKPKDTAALEQK 215

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
               A LG++ EA+  L   L+  P +   L+ +GI+  +   +  A   +S  +KL+  
Sbjct: 216 CLILANLGKNEEALGALEDFLKKFPANEAALYHKGILLSELSRYEDAERTISKVLKLNPG 275

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           ++ A+   G AL  +    +A EA  +AI+LD  + EAW +       L   E+ALE   
Sbjct: 276 HREAWFRKGFALVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEALEAFD 335

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            +L       + ++ R L L  L    +A +  +    +DP N +  + +       G+Y
Sbjct: 336 TILETYPDMEEIWYNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKY 395

Query: 636 REAIKDYDAALDLELDSME 654
            EA++ +D  L+   D  E
Sbjct: 396 EEALETFDRLLEYHPDFTE 414



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 115/260 (44%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
            N GK   A+   +  LK+ P    AL  +G   +     E A    ++ ++ NP   EA
Sbjct: 220 ANLGKNEEALGALEDFLKKFPANEAALYHKGILLSELSRYEDAERTISKVLKLNPGHREA 279

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W R+G A   L    EAI+   +A+  +P   +  + +     K + +  A+E     ++
Sbjct: 280 WFRKGFALVQLLRLNEAIEAFDEAIRLDPAYFEAWNYKCFALMKLEVYEEALEAFDTILE 339

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
              + +  +    LAL  +  + +A  +  +  +LD    +AW    +        E+AL
Sbjct: 340 TYPDMEEIWYNRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKYEEAL 399

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           E   ++L     F++A   RG +L GLG+ ++A++ L+  L  +P N      +      
Sbjct: 400 ETFDRLLEYHPDFTEAQKFRGTVLTGLGRFEEALESLTKSLEKEPENYNMWIQKGLLLLD 459

Query: 632 IGEYREAIKDYDAALDLELD 651
           IG++  A++ ++ A  L+ D
Sbjct: 460 IGKFEPALEAFENAAGLKPD 479



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 123/266 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +A +    +  A   F ++ + DP   +A   +G   A   + E A+  F   ++ +
Sbjct: 350 NRALALLKLQNFPEAARSFARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYH 409

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA K RG     LG   EA++ L+K+LE EP + ++  ++G++      F  A+E 
Sbjct: 410 PDFTEAQKFRGTVLTGLGRFEEALESLTKSLEKEPENYNMWIQKGLLLLDIGKFEPALEA 469

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                 L  +++  +   G AL S+  Y++A EA  + + L+    + W         L 
Sbjct: 470 FENAAGLKPDDEICWMNRGFALYSLECYEEALEAFKEGLHLNPYLEKGWNKKGIVLGKLG 529

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +E+ALE  ++ + +   F  A+   GLLL    +++KA +  +  L  +P +++ LY R
Sbjct: 530 KTEEALEAFEEAVKLRPDFEDAWKNMGLLLFASEEYEKAEEAFAEVLKTNPEDLDALYNR 589

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
                 +G    A++  +  + L  D
Sbjct: 590 GISLLRLGRNETALEYLEKVVSLSPD 615



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/291 (22%), Positives = 128/291 (43%), Gaps = 3/291 (1%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
             R+++    + D    +G      GKY  A+  FD++L+  P + EA   RGT      
Sbjct: 368 FARVTELDPGNTDAWFQQGRLLARAGKYEEALETFDRLLEYHPDFTEAQKFRGTVLTGLG 427

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
             E A+   T++++  P     W ++G     +G+   A++    A   +P+       R
Sbjct: 428 RFEEALESLTKSLEKEPENYNMWIQKGLLLLDIGKFEPALEAFENAAGLKPDDEICWMNR 487

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G   +  + +  A+E     + L+   +  +   G+ L  +G+ ++A EA  +A++L  +
Sbjct: 488 GFALYSLECYEEALEAFKEGLHLNPYLEKGWNKKGIVLGKLGKTEEALEAFEEAVKLRPD 547

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           F +AW ++          EKA E   +VL  +     A + RG+ L  LG+++ A++ L 
Sbjct: 548 FEDAWKNMGLLLFASEEYEKAEEAFAEVLKTNPEDLDALYNRGISLLRLGRNETALEYLE 607

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
             + + P   +  Y        +GE  +A++ ++    L   + E   +QC
Sbjct: 608 KVVSLSPDYPDLAYSLGVALMELGELEKALETFE---KLAAKNPEDLEIQC 655



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 9/311 (2%)

Query: 340  DSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYAS 399
            D   SR+  S+K    +E S + +R   F       +K+  +      GIA +    Y  
Sbjct: 1558 DILYSRAVASYKLLDFEEASKDLERLLLFAPGFPDYTKACYM-----LGIASIELQDYER 1612

Query: 400  AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
            A+   D +L+ +P + +AL           E E A   F + ++++P   E+    G   
Sbjct: 1613 ALQALDLVLEREPAHRDALYNMALVLFNLEEYEEAARTFEQLLEASPEDPESLNYLGLCL 1672

Query: 460  AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              L +  EA++   KA  F P + + L+       K      ++      +++  EN  A
Sbjct: 1673 LELEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQESLGYFDRILEISPENYDA 1732

Query: 520  YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL--TQFYQDLANSEKALECLQQV 577
              Y G+A   + +Y++A ++    ++ D N ++A  ++    F Q L   E A    ++ 
Sbjct: 1733 MNYKGVAFCMLEQYREALKSFDNVLKKDPNNIKAVYNVGVVCFKQKL--YETAARAFKEA 1790

Query: 578  LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
            L I+     +    GL L   G ++ A+K     L I P + + +  R      + +Y E
Sbjct: 1791 LTINPWHEPSLRYLGLSLAKTGDYEDALKAFEKLLRIKPQDPQAMNYRGVLLGKLEKYGE 1850

Query: 638  AIKDYDAALDL 648
            AIK +D  L +
Sbjct: 1851 AIKAFDEVLSI 1861



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 124/284 (43%), Gaps = 22/284 (7%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-- 443
            S GIA +  GK   A  +F +IL+  P + +A  G+G     Q   + A+  F +A+   
Sbjct: 1373 SAGIALMGLGKQEEAFEVFSEILEVYPDFKKAWYGKGLVLFSQERYDEALEAFEQALMES 1432

Query: 444  -----------------SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
                             S+P   +AW + G A+       +A     K LE  P  AD+ 
Sbjct: 1433 PYEVAKIEESEIEKSKISDPELEDAWTKIGLAQLKTRRYEDAFDTFEKILEKNPTDADVW 1492

Query: 487  HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            +  G+V         AVE     ++L+    +A    GL L ++  Y++A +A   A+ L
Sbjct: 1493 YLSGLVMRGLDQNEEAVEVFEKALELNPALTAALEQKGLGLLALCRYEEARDAFGSALAL 1552

Query: 547  DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF---SKAYHLRGLLLHGLGQHKK 603
            +   ++           L + E+A + L+++L     F   +KA ++ G+    L  +++
Sbjct: 1553 NPENVDILYSRAVASYKLLDFEEASKDLERLLLFAPGFPDYTKACYMLGIASIELQDYER 1612

Query: 604  AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            A++ L   L  +P++ + LY  A     + EY EA + ++  L+
Sbjct: 1613 ALQALDLVLEREPAHRDALYNMALVLFNLEEYEEAARTFEQLLE 1656



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 129/330 (39%), Gaps = 71/330 (21%)

Query: 383  FRLSRGIAQVNEGKYASAISIFDQI-------------------LKEDPMYPEALIGRGT 423
            FRL  GI     G+Y  A  +F+ I                    K+ P+Y      +G 
Sbjct: 870  FRL--GIEYFELGRYDEAFPLFEGINEEVKAKNGEASGEESENSHKDSPLY-----WKGL 922

Query: 424  ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--- 480
                Q   E A+  F++  + NP   E W   G + + LG+  EA + L KALE +P   
Sbjct: 923  MFIRQEAYEKALEIFSKLTEQNPQFAEGWYFIGMSCSKLGKHEEASKALKKALEIDPAFR 982

Query: 481  NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN--------KSAYTYLGLALSSIGE 532
            +  DI +  G+  F+  +F  A++     +    EN        +       L+L  +G 
Sbjct: 983  DLHDIYYRLGLSCFELGNFEEALKAFEEALSTVPENSERNPDEAQDIMYKKSLSLLRLGR 1042

Query: 533  YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
            Y +AE    + + LD    EA  HL+       + ++ALE  ++VL  +         +G
Sbjct: 1043 YAEAESGFKEVLALDPANTEALAHLSTACFKKGHYKEALEIFERVLSQNPARKTILFRKG 1102

Query: 593  LLLHGLGQHKKAIK--DLSSGLGID--------------------------------PSN 618
            L L   G++ +A++  DL   L  D                                P N
Sbjct: 1103 LALKAFGKNLEALEAFDLVLKLKPDCTYALDQKGYTLFELEKYEEAAEAFKAALEYSPKN 1162

Query: 619  IECLYLRASCYHAIGEYREAIKDYDAALDL 648
             +  YLRA     +  ++EA+++++ A DL
Sbjct: 1163 ADMQYLRALALFRLRNFKEAMQEFEKAFDL 1192



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 15/257 (5%)

Query: 390  AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
            AQ+  G Y  A+   +++++E           G A     + E A   F+E ++  P   
Sbjct: 1343 AQIELGHYEEALLPLEKLIREGLASKGTFYSAGIALMGLGKQEEAFEVFSEILEVYPDFK 1402

Query: 450  EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
            +AW  +G    +     EA++   +AL   P     + E  I   K  D           
Sbjct: 1403 KAWYGKGLVLFSQERYDEALEAFEQALMESPYEVAKIEESEIEKSKISD----------- 1451

Query: 510  VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
                 E + A+T +GLA      Y+ A +   K ++ +    + W       + L  +E+
Sbjct: 1452 ----PELEDAWTKIGLAQLKTRRYEDAFDTFEKILEKNPTDADVWYLSGLVMRGLDQNEE 1507

Query: 570  ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
            A+E  ++ L ++   + A   +GL L  L ++++A     S L ++P N++ LY RA   
Sbjct: 1508 AVEVFEKALELNPALTAALEQKGLGLLALCRYEEARDAFGSALALNPENVDILYSRAVAS 1567

Query: 630  HAIGEYREAIKDYDAAL 646
            + + ++ EA KD +  L
Sbjct: 1568 YKLLDFEEASKDLERLL 1584



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 132/323 (40%), Gaps = 64/323 (19%)

Query: 387  RGIAQVNEGKYASAISIFDQIL----KEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
            +G+A +N  ++  A+  FD+++     +DP Y +A   +G A+        A+  F  A+
Sbjct: 691  KGLALLNMERFEDAVKAFDEVIVRNTTKDPSYEDAGTLKGFAQMQLGNFLPALETFEGAL 750

Query: 443  QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
            + NP +G  W  +G     L    EA +    AL   P  +D    R +  FK   +  A
Sbjct: 751  EKNPDSGITWYYKGLTLQELQRQEEAARAFESALRLNPEFSDAFEYRAVCLFKTGQYETA 810

Query: 503  VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA--HLKAIQLDRN-----FLEAWG 555
            +E L A ++ D EN S      +    +G +K+A EA  +L  I  +R        EA  
Sbjct: 811  LEALEALLENDPENLSTLNSRAICFLELGRHKEAVEALSNLLEINPEREETKFRLDEAKF 870

Query: 556  HLTQFYQDLANSEKALECLQQV------------------------------LYIDKR-- 583
             L   Y +L   ++A    + +                              ++I +   
Sbjct: 871  RLGIEYFELGRYDEAFPLFEGINEEVKAKNGEASGEESENSHKDSPLYWKGLMFIRQEAY 930

Query: 584  ------FSK----------AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS--NIECLYLR 625
                  FSK           ++  G+    LG+H++A K L   L IDP+  ++  +Y R
Sbjct: 931  EKALEIFSKLTEQNPQFAEGWYFIGMSCSKLGKHEEASKALKKALEIDPAFRDLHDIYYR 990

Query: 626  --ASCYHAIGEYREAIKDYDAAL 646
               SC+  +G + EA+K ++ AL
Sbjct: 991  LGLSCFE-LGNFEEALKAFEEAL 1012



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 99/230 (43%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
             +   N  +Y  A   F+Q+L+  P  PE+L   G       +L+ A+  F +A   NP 
Sbjct: 1635 ALVLFNLEEYEEAARTFEQLLEASPEDPESLNYLGLCLLELEDLKEALKAFEKAALFNPK 1694

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              EA          L    E++    + LE  P + D ++ +G+     + +  A++   
Sbjct: 1695 NEEALYNAATTLIKLNRIQESLGYFDRILEISPENYDAMNYKGVAFCMLEQYREALKSFD 1754

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
              +K D  N  A   +G+       Y+ A  A  +A+ ++     +  +L        + 
Sbjct: 1755 NVLKKDPNNIKAVYNVGVVCFKQKLYETAARAFKEALTINPWHEPSLRYLGLSLAKTGDY 1814

Query: 568  EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
            E AL+  +++L I  +  +A + RG+LL  L ++ +AIK     L I P+
Sbjct: 1815 EDALKAFEKLLRIKPQDPQAMNYRGVLLGKLEKYGEAIKAFDEVLSIYPN 1864



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 4/272 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG A  +   Y  A+  F + L  +P   +    +G       + E A+  F EA++ 
Sbjct: 485 MNRGFALYSLECYEEALEAFKEGLHLNPYLEKGWNKKGIVLGKLGKTEEALEAFEEAVKL 544

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   +AWK  G    A  E  +A +  ++ L+  P   D L+ RGI   +      A+E
Sbjct: 545 RPDFEDAWKNMGLLLFASEEYEKAEEAFAEVLKTNPEDLDALYNRGISLLRLGRNETALE 604

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            L   V L  +       LG+AL  +GE +KA E   K    +   LE      +   +L
Sbjct: 605 YLEKVVSLSPDYPDLAYSLGVALMELGELEKALETFEKLAAKNPEDLEIQCRKGKLAMEL 664

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL----GIDPSNIE 620
              E AL+  ++VL       +A++ +GL L  + + + A+K     +      DPS  +
Sbjct: 665 GEHETALQAFEKVLLEKPGSREAWYRKGLALLNMERFEDAVKAFDEVIVRNTTKDPSYED 724

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
              L+      +G +  A++ ++ AL+   DS
Sbjct: 725 AGTLKGFAQMQLGNFLPALETFEGALEKNPDS 756



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 100/240 (41%), Gaps = 3/240 (1%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G+  +   +Y  A   F   L  +P   + L  R  A     + E A  D    +   P
Sbjct: 1529 KGLGLLALCRYEEARDAFGSALALNPENVDILYSRAVASYKLLDFEEASKDLERLLLFAP 1588

Query: 447  SAGEAWK---RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
               +  K     G A   L +   A+Q L   LE EP   D L+   +V F  +++  A 
Sbjct: 1589 GFPDYTKACYMLGIASIELQDYERALQALDLVLEREPAHRDALYNMALVLFNLEEYEEAA 1648

Query: 504  EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                  ++   E+  +  YLGL L  + + K+A +A  KA   +    EA  +       
Sbjct: 1649 RTFEQLLEASPEDPESLNYLGLCLLELEDLKEALKAFEKAALFNPKNEEALYNAATTLIK 1708

Query: 564  LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            L   +++L    ++L I      A + +G+    L Q+++A+K   + L  DP+NI+ +Y
Sbjct: 1709 LNRIQESLGYFDRILEISPENYDAMNYKGVAFCMLEQYREALKSFDNVLKKDPNNIKAVY 1768



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 4/240 (1%)

Query: 382  DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
            D    + ++ +  G+YA A S F ++L  DP   EAL    TA   +   + A+  F   
Sbjct: 1028 DIMYKKSLSLLRLGRYAEAESGFKEVLALDPANTEALAHLSTACFKKGHYKEALEIFERV 1087

Query: 442  IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
            +  NP+      R+G A  A G+++EA++     L+ +P+    L ++G   F+ + +  
Sbjct: 1088 LSQNPARKTILFRKGLALKAFGKNLEALEAFDLVLKLKPDCTYALDQKGYTLFELEKYEE 1147

Query: 502  AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQ 559
            A E   A ++   +N        LAL  +  +K+A +   KA  L   +  +  +  L+ 
Sbjct: 1148 AAEAFKAALEYSPKNADMQYLRALALFRLRNFKEAMQEFEKAFDLGCRKPEISYYTGLSC 1207

Query: 560  FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            F  +  +   A++    VL    +  +    R L L  LG+ ++A+  ++S L     N+
Sbjct: 1208 F--ETGDYAGAIKAFDIVLRAGIQEPEILQKRALALFELGKAEEAVSAVNSLLEFSAENL 1265



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 86/186 (46%), Gaps = 8/186 (4%)

Query: 318  LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
            L D     +++ K+++ + K+ ++  + +    K + ++E+     R     +  IS   
Sbjct: 1675 LEDLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRIQESLGYFDR-----ILEISPEN 1729

Query: 378  SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
              +++++   G+A     +Y  A+  FD +LK+DP   +A+   G     Q+  E A   
Sbjct: 1730 YDAMNYK---GVAFCMLEQYREALKSFDNVLKKDPNNIKAVYNVGVVCFKQKLYETAARA 1786

Query: 438  FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
            F EA+  NP    + +  G + A  G+  +A++   K L  +P     ++ RG++  K +
Sbjct: 1787 FKEALTINPWHEPSLRYLGLSLAKTGDYEDALKAFEKLLRIKPQDPQAMNYRGVLLGKLE 1846

Query: 498  DFNAAV 503
             +  A+
Sbjct: 1847 KYGEAI 1852



 Score = 41.2 bits (95), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 76/344 (22%), Positives = 137/344 (39%), Gaps = 59/344 (17%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEA--LIGRGTARAFQRELEAAISDFTEAIQS 444
            +G+  + +  Y  A+ IF ++ +++P + E    IG   ++  + E   A     +A++ 
Sbjct: 920  KGLMFIRQEAYEKALEIFSKLTEQNPQFAEGWYFIGMSCSKLGKHE--EASKALKKALEI 977

Query: 445  NPS---AGEAWKRRGQARAALGESVEAIQDLSKAL-------EFEPNSA-DILHERGIVN 493
            +P+     + + R G +   LG   EA++   +AL       E  P+ A DI++++ +  
Sbjct: 978  DPAFRDLHDIYYRLGLSCFELGNFEEALKAFEEALSTVPENSERNPDEAQDIMYKKSLSL 1037

Query: 494  FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD---RNF 550
             +   +  A       + LD  N  A  +L  A    G YK+A E   + +  +   +  
Sbjct: 1038 LRLGRYAEAESGFKEVLALDPANTEALAHLSTACFKKGHYKEALEIFERVLSQNPARKTI 1097

Query: 551  LEAWG-HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
            L   G  L  F ++L    +ALE    VL +    + A   +G  L  L ++++A +   
Sbjct: 1098 LFRKGLALKAFGKNL----EALEAFDLVLKLKPDCTYALDQKGYTLFELEKYEEAAEAFK 1153

Query: 610  SGLGIDPSNIECLYLRA-----------------------------------SCYHAIGE 634
            + L   P N +  YLRA                                   SC+   G+
Sbjct: 1154 AALEYSPKNADMQYLRALALFRLRNFKEAMQEFEKAFDLGCRKPEISYYTGLSCFET-GD 1212

Query: 635  YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
            Y  AIK +D  L   +   E    + LA ++   A    S +NS
Sbjct: 1213 YAGAIKAFDIVLRAGIQEPEILQKRALALFELGKAEEAVSAVNS 1256



 Score = 40.4 bits (93), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 5/95 (5%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQD-ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L   + + KAI   + +L +  + ++ + +R     + E  +  +   + ALQL+P    
Sbjct: 15  LVKRKRYEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSFNDALQLEPGNSD 74

Query: 105 AYILKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
           A   KG  F+ALGR EEAL    + YE AL  S D
Sbjct: 75  ALYRKGTCFAALGRFEEAL----EAYESALESSPD 105


>gi|145482337|ref|XP_001427191.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394271|emb|CAK59793.1| unnamed protein product [Paramecium tetraurelia]
          Length = 610

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 150/304 (49%), Gaps = 14/304 (4%)

Query: 357 ETSNEAKRNKK----FCVTRISKS-----KSISVDFRLS-----RGIAQVNEGKYASAIS 402
           +  N++ RNKK     C+ +  ++     ++IS++ + S     +G       ++  A+ 
Sbjct: 174 DPQNQSARNKKGNALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALK 233

Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
            +++ +  +P   +A  G+G      ++ + AI  F EAI  NP   +AW  +G A A L
Sbjct: 234 SYEESILINPQQIDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKL 293

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
            +  EAIQ  +KA+  +P      + +G+   + + +  A++  +  + ++ +   A+  
Sbjct: 294 NQYQEAIQSFNKAISIDPKCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYGYAFYN 353

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            G +L+ +  Y++A + + +AI ++  F  AW    +    L   + A++   + + I+ 
Sbjct: 354 KGNSLARLQHYQEAIKCYDEAIFINPKFDTAWNIKGKVLVLLTYYQHAIKSFDEAISINP 413

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
           +++ A+  +G  L  L Q+++AIK     + I+P   +  + +     ++ +Y+EAIK Y
Sbjct: 414 QYNDAWFSKGQALARLKQYQEAIKSFDEAISINPEQNDAWFSKGQALASLKQYQEAIKSY 473

Query: 643 DAAL 646
           D A+
Sbjct: 474 DEAI 477



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/276 (22%), Positives = 134/276 (48%), Gaps = 5/276 (1%)

Query: 378 SISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           +IS+D      R  +G A +   +Y  AI  +D+ +  +P +      +G   A   + +
Sbjct: 170 AISIDPQNQSARNKKGNALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQ 229

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            A+  + E+I  NP   +AW  +G     L +   AIQ   +A+   P   D  + +G  
Sbjct: 230 EALKSYEESILINPQQIDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNA 289

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             K   +  A++  +  + +D +   A+   GLAL+ +  Y++A + + +AI ++  +  
Sbjct: 290 LAKLNQYQEAIQSFNKAISIDPKCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYGY 349

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A+ +       L + ++A++C  + ++I+ +F  A++++G +L  L  ++ AIK     +
Sbjct: 350 AFYNKGNSLARLQHYQEAIKCYDEAIFINPKFDTAWNIKGKVLVLLTYYQHAIKSFDEAI 409

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            I+P   +  + +      + +Y+EAIK +D A+ +
Sbjct: 410 SINPQYNDAWFSKGQALARLKQYQEAIKSFDEAISI 445



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 140/284 (49%), Gaps = 7/284 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A  N  +Y  AI  +DQ +  DP Y  A  G+G A A  ++ + AI  + +AI  +P
Sbjct: 48  KGQALANLKQYQEAIKCYDQAISIDPKYASAWQGKGQALANLKQYQEAIKCYDQAISIDP 107

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  +G + A L E  EAI+  ++ +   P   +    +G    K K +  A++  
Sbjct: 108 KYYPTYYYKGLSLAELKEYQEAIKCYNQTISINPKVFNAQKNKGNALAKLKLYQEAIKCY 167

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + +D +N+SA    G AL  + +Y++A + + +AI ++  F   W +      +L  
Sbjct: 168 DEAISIDPQNQSARNKKGNALICLKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQ 227

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++AL+  ++ + I+ +   A++ +GL+L  L Q+K AI+     + I+P   +    + 
Sbjct: 228 HQEALKSYEESILINPQQIDAWYGKGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKG 287

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
           +    + +Y+EAI+ ++ A+ ++   +        AFY K +AL
Sbjct: 288 NALAKLNQYQEAIQSFNKAISIDPKCV-------YAFYNKGLAL 324



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 135/265 (50%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           +L+ G++ V   +Y  AI  +D+ +  +P Y  A  G+G A A  ++ + AI  + +AI 
Sbjct: 11  QLALGLSLVCLKQYNEAIKCYDEAISINPKYASAWQGKGQALANLKQYQEAIKCYDQAIS 70

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            +P    AW+ +GQA A L +  EAI+   +A+  +P      + +G+   + K++  A+
Sbjct: 71  IDPKYASAWQGKGQALANLKQYQEAIKCYDQAISIDPKYYPTYYYKGLSLAELKEYQEAI 130

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           +  +  + ++ +  +A    G AL+ +  Y++A + + +AI +D     A          
Sbjct: 131 KCYNQTISINPKVFNAQKNKGNALAKLKLYQEAIKCYDEAISIDPQNQSARNKKGNALIC 190

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   ++A++C  + + I+ +FS  +  +G  L  L QH++A+K     + I+P  I+  Y
Sbjct: 191 LKQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALKSYEESILINPQQIDAWY 250

Query: 624 LRASCYHAIGEYREAIKDYDAALDL 648
            +      + +Y+ AI+ +D A+ +
Sbjct: 251 GKGLVLTQLKQYKHAIQSFDEAISI 275



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 135/280 (48%), Gaps = 9/280 (3%)

Query: 376 SKSISVDFRLSRGIAQVNEGK-------YASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           +++IS++ ++    AQ N+G        Y  AI  +D+ +  DP    A   +G A    
Sbjct: 134 NQTISINPKVFN--AQKNKGNALAKLKLYQEAIKCYDEAISIDPQNQSARNKKGNALICL 191

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++ + AI  + EAI  NP     WK +G   A L +  EA++   +++   P   D  + 
Sbjct: 192 KQYQEAIKCYDEAISINPKFSNVWKNKGNTLAELHQHQEALKSYEESILINPQQIDAWYG 251

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G+V  + K +  A++     + ++ +   A+   G AL+ + +Y++A ++  KAI +D 
Sbjct: 252 KGLVLTQLKQYKHAIQSFDEAISINPKYNDAWNGKGNALAKLNQYQEAIQSFNKAISIDP 311

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             + A+ +       L +  +A++C  + + I+ ++  A++ +G  L  L  +++AIK  
Sbjct: 312 KCVYAFYNKGLALARLQHYREAIKCYNEAISINPKYGYAFYNKGNSLARLQHYQEAIKCY 371

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              + I+P       ++      +  Y+ AIK +D A+ +
Sbjct: 372 DEAIFINPKFDTAWNIKGKVLVLLTYYQHAIKSFDEAISI 411


>gi|91201109|emb|CAJ74168.1| hypothetical protein kuste3406 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 610

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 135/269 (50%), Gaps = 1/269 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +++G   +++  Y  A+  +++ +   P  PEA   +     +  + E AI     A+QS
Sbjct: 33  INKGNILIHKQNYQDALHEYERAISLKPDAPEAWYNKAAVLDYMGDFERAIEAADMAVQS 92

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   EAW  +G+A    G+  EAI+   KALE +P++  +L+ +G V+    D  A+V+
Sbjct: 93  KPDYWEAWYMKGRASDHTGKYYEAIKAFDKALEIKPDALMVLYNKGNVHDHIGDIEASVK 152

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKK-AEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
              + +KL  +   A+   GLAL+ I E +  A EA+ +AI+++  + EAW +    +  
Sbjct: 153 TYDSILKLKPDEYEAWNNKGLALARIPEKRGIALEAYDQAIRINPVYYEAWINKGNCFVR 212

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L    +A++     + I  +   A+  +G  L  +G+H++A+   +  + + P +     
Sbjct: 213 LRRYGEAIDAYDTAIKIRPKEHAAWANKGFTLADMGKHEEAVDAFNKAIELSPGSYAAWN 272

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDS 652
            +     ++  Y +A+K Y+  ++++ DS
Sbjct: 273 GKGLALDSLSRYEDALKAYEKTIEIQPDS 301



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 155/358 (43%), Gaps = 32/358 (8%)

Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVD-----FRLSRGI--AQVNEG-------KYASA 400
           LK    EA  NK   + RI + + I+++      R++     A +N+G       +Y  A
Sbjct: 160 LKPDEYEAWNNKGLALARIPEKRGIALEAYDQAIRINPVYYEAWINKGNCFVRLRRYGEA 219

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I  +D  +K  P    A   +G   A   + E A+  F +AI+ +P +  AW  +G A  
Sbjct: 220 IDAYDTAIKIRPKEHAAWANKGFTLADMGKHEEAVDAFNKAIELSPGSYAAWNGKGLALD 279

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
           +L    +A++   K +E +P+S       G+   + K  + AV      + +  ++    
Sbjct: 280 SLSRYEDALKAYEKTIEIQPDSYGAWTNMGLTLSRLKRHDEAVAAYEKALIIQPDSYETM 339

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
           T  G  L  +G Y +A +A  +AI+L  ++ EAW +       +   E+A E   +V  I
Sbjct: 340 TNKGCELFHLGNYVEAIKAFDRAIELQPDYAEAWKNKGNALARMGWLEEATESFAKVGQI 399

Query: 581 D--------KRFSK----AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
                     R SK    A    G+ L  L ++  A+   ++ L I   + +    +   
Sbjct: 400 ITDEEAVNVPRLSKIKLEALQNNGIALIRLNKYADAVNVYNNALRIKNDDFDVWMNKGIS 459

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKINSEF 680
           +  + EY EA+  +D A  LE ++ E F     VL+ +  YQ+ +  Y  A ++  +F
Sbjct: 460 HSFLNEYEEALTAFDKAALLESNAYEAFNYKGYVLEEMGKYQEALDAYDNALRLKPDF 517



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 12/261 (4%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A++ +++ L   P   E +  +G           AI  F  AI+  P   EAWK +G A 
Sbjct: 321 AVAAYEKALIIQPDSYETMTNKGCELFHLGNYVEAIKAFDRAIELQPDYAEAWKNKGNAL 380

Query: 460 AALGESVEAIQDLSKALEF--------EPNSADI----LHERGIVNFKFKDFNAAVEDLS 507
           A +G   EA +  +K  +          P  + I    L   GI   +   +  AV   +
Sbjct: 381 ARMGWLEEATESFAKVGQIITDEEAVNVPRLSKIKLEALQNNGIALIRLNKYADAVNVYN 440

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +++  ++   +   G++ S + EY++A  A  KA  L+ N  EA+ +     +++   
Sbjct: 441 NALRIKNDDFDVWMNKGISHSFLNEYEEALTAFDKAALLESNAYEAFNYKGYVLEEMGKY 500

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++AL+     L +   F +A + +GLLL  +G H+ A+K  ++ L I+P     L+ +A 
Sbjct: 501 QEALDAYDNALRLKPDFPEAMNNKGLLLDNIGNHEDAVKMYNNALRINPDFDAVLFNKAC 560

Query: 628 CYHAIGEYREAIKDYDAALDL 648
               +    EA+   + A+ L
Sbjct: 561 ALSLLSRKEEALDSLEKAVQL 581



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 12/243 (4%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-- 443
           ++G    + G Y  AI  FD+ ++  P Y EA   +G A A    LE A   F +  Q  
Sbjct: 341 NKGCELFHLGNYVEAIKAFDRAIELQPDYAEAWKNKGNALARMGWLEEATESFAKVGQII 400

Query: 444 ------SNPSAG----EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
                 + P       EA +  G A   L +  +A+   + AL  + +  D+   +GI +
Sbjct: 401 TDEEAVNVPRLSKIKLEALQNNGIALIRLNKYADAVNVYNNALRIKNDDFDVWMNKGISH 460

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
               ++  A+        L+     A+ Y G  L  +G+Y++A +A+  A++L  +F EA
Sbjct: 461 SFLNEYEEALTAFDKAALLESNAYEAFNYKGYVLEEMGKYQEALDAYDNALRLKPDFPEA 520

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
             +      ++ N E A++     L I+  F      +   L  L + ++A+  L   + 
Sbjct: 521 MNNKGLLLDNIGNHEDAVKMYNNALRINPDFDAVLFNKACALSLLSRKEEALDSLEKAVQ 580

Query: 614 IDP 616
           ++P
Sbjct: 581 LNP 583



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/278 (19%), Positives = 120/278 (43%), Gaps = 12/278 (4%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +G+A  +  +Y  A+  +++ ++  P    A    G   +  +  + A++ + +A+   
Sbjct: 273 GKGLALDSLSRYEDALKAYEKTIEIQPDSYGAWTNMGLTLSRLKRHDEAVAAYEKALIIQ 332

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P + E    +G     LG  VEAI+   +A+E +P+ A+    +G    +      A E 
Sbjct: 333 PDSYETMTNKGCELFHLGNYVEAIKAFDRAIELQPDYAEAWKNKGNALARMGWLEEATES 392

Query: 506 LSAC------------VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +               +L K    A    G+AL  + +Y  A   +  A+++  +  + 
Sbjct: 393 FAKVGQIITDEEAVNVPRLSKIKLEALQNNGIALIRLNKYADAVNVYNNALRIKNDDFDV 452

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           W +    +  L   E+AL    +   ++    +A++ +G +L  +G++++A+    + L 
Sbjct: 453 WMNKGISHSFLNEYEEALTAFDKAALLESNAYEAFNYKGYVLEEMGKYQEALDAYDNALR 512

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           + P   E +  +      IG + +A+K Y+ AL +  D
Sbjct: 513 LKPDFPEAMNNKGLLLDNIGNHEDAVKMYNNALRINPD 550



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 14/172 (8%)

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           Y+ A   + +AI L  +  EAW +       + + E+A+E     +     + +A++++G
Sbjct: 45  YQDALHEYERAISLKPDAPEAWYNKAAVLDYMGDFERAIEAADMAVQSKPDYWEAWYMKG 104

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
                 G++ +AIK     L I P  +  LY + + +  IG+   ++K YD+ L L+ D 
Sbjct: 105 RASDHTGKYYEAIKAFDKALEIKPDALMVLYNKGNVHDHIGDIEASVKTYDSILKLKPDE 164

Query: 653 MEKFVLQCLAFY----QKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            E +  + LA      ++ IAL            +D    I+P++ E W  +
Sbjct: 165 YEAWNNKGLALARIPEKRGIALEA----------YDQAIRINPVYYEAWINK 206



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 3/109 (2%)

Query: 24  DELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL-AQSYEIQDICNRAFCYSQL 82
           D+ +R++ V   A   +        LR + +AI   D+ +  +  E     N+ F  + +
Sbjct: 190 DQAIRINPVYYEAWINKGNC--FVRLRRYGEAIDAYDTAIKIRPKEHAAWANKGFTLADM 247

Query: 83  ELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
             H+  +   +KA++L P    A+  KG A  +L R E+AL  +EK  E
Sbjct: 248 GKHEEAVDAFNKAIELSPGSYAAWNGKGLALDSLSRYEDALKAYEKTIE 296


>gi|327404353|ref|YP_004345191.1| hypothetical protein Fluta_2367 [Fluviicola taffensis DSM 16823]
 gi|327319861|gb|AEA44353.1| Tetratricopeptide TPR_1 repeat-containing protein [Fluviicola
           taffensis DSM 16823]
          Length = 322

 Score =  101 bits (251), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 130/259 (50%), Gaps = 3/259 (1%)

Query: 391 QVNEGKYAS---AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           +++  KY S   ++ I    +K D    EA + RG      ++ +A++ D  + I   P 
Sbjct: 23  EIDTSKYTSYRLSVRIASNRIKIDSTNAEAYLQRGYYLFLLKDFDASLRDTDKFISLEPK 82

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A++ R +   + G   +AIQD++KA+  EP++ D++++R  + +K  ++ A  +DL 
Sbjct: 83  VASAYQSRAKVSYSQGNIDQAIQDINKAISLEPDNIDMINDRSTLYYKAGNYEACKKDLL 142

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +K D EN S   YLG   +    Y KA       I  D  + EA+ +L   Y  L ++
Sbjct: 143 YLLKKDPENLSFLLYLGYCETKQKNYSKAITHFQTLISKDSLYKEAYNNLGFCYYSLGDN 202

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
            KAL+ + + L ID R+ +AY  R  +    G +KKA++DL+  L + P     L  RA 
Sbjct: 203 IKALKAINKALEIDPRYPEAYDKRSQVWMATGDYKKALEDLNKALSLYPFLSTSLNNRAL 262

Query: 628 CYHAIGEYREAIKDYDAAL 646
            Y  + +Y +A+ D +  L
Sbjct: 263 IYLEMKQYSDALGDMNLLL 281


>gi|423452169|ref|ZP_17429022.1| hypothetical protein IEE_00913 [Bacillus cereus BAG5X1-1]
 gi|401142240|gb|EJQ49789.1| hypothetical protein IEE_00913 [Bacillus cereus BAG5X1-1]
          Length = 918

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 125/249 (50%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI ++++ ++ D  Y  A I RG     Q E E AI D+T+ I+ + +    +  R  A 
Sbjct: 572 AIEMYNKAIELDGNYLSAYINRGHINRRQGEYEDAILDYTKVIELDGNKATFYDHRAYAY 631

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             L +  EAI+D +KA+E + N A   + RG +  +   +  A+ + +  ++LD      
Sbjct: 632 IQLEKYEEAIEDCNKAIELDGNKAMFYNRRGNIYSQLGKYGKAIGECNKAIELDGNRAVF 691

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y       S +G+Y++A E   KAI LD N   A+      Y      EKA+E  ++V+ 
Sbjct: 692 YCNRAFVYSQLGKYEEAIEECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIEDCKKVIE 751

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           +D+  + AY  R    + L ++++AI+D +  + +D S       R   Y+ + +Y+EAI
Sbjct: 752 LDENNASAYSNRSYAYNQLEKYEEAIEDCNKAIKLDGSRAVFYNNRGYAYNQLEKYKEAI 811

Query: 640 KDYDAALDL 648
           +D   A++L
Sbjct: 812 EDCKKAIEL 820



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 133/279 (47%), Gaps = 9/279 (3%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG     +G+Y  AI  + ++++ D         R  A     + E AI D  +AI+ 
Sbjct: 591 INRGHINRRQGEYEDAILDYTKVIELDGNKATFYDHRAYAYIQLEKYEEAIEDCNKAIEL 650

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           + +    + RRG   + LG+  +AI + +KA+E + N A     R  V  +   +  A+E
Sbjct: 651 DGNKAMFYNRRGNIYSQLGKYGKAIGECNKAIELDGNRAVFYCNRAFVYSQLGKYEEAIE 710

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           +    + LD  N +AY+      +  G+Y+KA E   K I+LD N   A+ + +  Y  L
Sbjct: 711 ECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIEDCKKVIELDENNASAYSNRSYAYNQL 770

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC--- 621
              E+A+E   + + +D   +  Y+ RG   + L ++K+AI+D    + +  + ++    
Sbjct: 771 EKYEEAIEDCNKAIKLDGSRAVFYNNRGYAYNQLEKYKEAIEDCKKAIELIENKVDVHSK 830

Query: 622 ------LYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
                    R+  Y+ + +Y+EAI+D   A++L  D  E
Sbjct: 831 RIKGNAYSNRSHAYNQLEKYKEAIEDCKKAIELGTDKTE 869



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 106/216 (49%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI  + +AI+ + +   A+  RG      GE  +AI D +K +E + N A     R    
Sbjct: 572 AIEMYNKAIELDGNYLSAYINRGHINRRQGEYEDAILDYTKVIELDGNKATFYDHRAYAY 631

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            + + +  A+ED +  ++LD      Y   G   S +G+Y KA     KAI+LD N    
Sbjct: 632 IQLEKYEEAIEDCNKAIELDGNKAMFYNRRGNIYSQLGKYGKAIGECNKAIELDGNRAVF 691

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           + +    Y  L   E+A+E  ++ + +D   + AY  R  + +  G+++KAI+D    + 
Sbjct: 692 YCNRAFVYSQLGKYEEAIEECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIEDCKKVIE 751

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +D +N      R+  Y+ + +Y EAI+D + A+ L+
Sbjct: 752 LDENNASAYSNRSYAYNQLEKYEEAIEDCNKAIKLD 787



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 10/169 (5%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  AI    ++++ D     A   R  A     + E AI D  +AI+ + S    +  
Sbjct: 737 GKYEKAIEDCKKVIELDENNASAYSNRSYAYNQLEKYEEAIEDCNKAIKLDGSRAVFYNN 796

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF---------KFKDFNAAVED 505
           RG A   L +  EAI+D  KA+E   N  D+  +R   N          + + +  A+ED
Sbjct: 797 RGYAYNQLEKYKEAIEDCKKAIELIENKVDVHSKRIKGNAYSNRSHAYNQLEKYKEAIED 856

Query: 506 LSACVKLDKENKSAYTY-LGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
               ++L  +      Y  G A   + +Y+KAE+ ++KAI+++ ++ EA
Sbjct: 857 CKKAIELGTDKTEVLYYNRGYAYEKLKDYQKAEKDYIKAIEVNPDYEEA 905



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 14/86 (16%)

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
           CNRAF YSQL  ++  I +C KA+ LD     AY  +   ++  G+ E+A+         
Sbjct: 693 CNRAFVYSQLGKYEEAIEECKKAIGLDGNNAAAYSCRAYVYNQSGKYEKAIE-------- 744

Query: 133 ALHQSADLKQFLELEELLTAAKQDRS 158
                 D K+ +EL+E   +A  +RS
Sbjct: 745 ------DCKKVIELDENNASAYSNRS 764



 Score = 43.5 bits (101), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 37/58 (63%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           NR++ Y+QLE ++  I DC+KA++LD +    Y  +G A++ L + +EA+   +K  E
Sbjct: 762 NRSYAYNQLEKYEEAIEDCNKAIKLDGSRAVFYNNRGYAYNQLEKYKEAIEDCKKAIE 819



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++ +++K I  LD   A  Y+     +RA+ Y QLE ++  I DC+KA++LD      Y 
Sbjct: 606 AILDYTKVIE-LDGNKATFYD-----HRAYAYIQLEKYEEAIEDCNKAIELDGNKAMFYN 659

Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
            +G  +S LG+  +A+    K  E
Sbjct: 660 RRGNIYSQLGKYGKAIGECNKAIE 683



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 47/87 (54%)

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           D  NS+KA+E   + + +D  +  AY  RG +    G+++ AI D +  + +D +     
Sbjct: 565 DNNNSKKAIEMYNKAIELDGNYLSAYINRGHINRRQGEYEDAILDYTKVIELDGNKATFY 624

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLE 649
             RA  Y  + +Y EAI+D + A++L+
Sbjct: 625 DHRAYAYIQLEKYEEAIEDCNKAIELD 651


>gi|17231265|ref|NP_487813.1| serine/threonine kinase [Nostoc sp. PCC 7120]
 gi|17132907|dbj|BAB75472.1| serine/threonine kinase [Nostoc sp. PCC 7120]
          Length = 707

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 136/284 (47%), Gaps = 11/284 (3%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+S ++Q +   P Y  A  G+G      ++ + A++ + +AIQ  P   EAW  R
Sbjct: 344 RYKDALSAYEQAVDIRPDYAPAWQGKGKTLFRLKQYQDALTAYDKAIQIQPDYVEAWSGR 403

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G +   L    EAI    KAL+   N  ++ + RG      K ++ A++     ++ + +
Sbjct: 404 GFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKSYDKAIEFNSD 463

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              ++   GLAL S+ EY +A  A+ KAI++  ++  AW +L     +L   E A +   
Sbjct: 464 AYESFYNKGLALQSMKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYD 523

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + +     ++ A+  RG +L  L ++ +A++  +  +  +P+N +  Y R    H    Y
Sbjct: 524 KAVQYKTDYAIAWLSRGNVLIILRRYPEALESFNQVIKFNPNNYQAWYGRGWSQHQNQRY 583

Query: 636 REAIKDYDAALDLELDSME--------KFVLQCLAFYQKEIALY 671
            EAI+ Y  A  ++  + E        +++LQ    YQ+ IA Y
Sbjct: 584 AEAIESYKKAATIKPSNYEIWYSLGNSQYILQQ---YQEAIASY 624



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 39/290 (13%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG +  N  +Y+ AI+ FD+ L+ +  YPE    RG A +  ++ + AI  + +AI+ N 
Sbjct: 403 RGFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKSYDKAIEFNS 462

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            A E++  +G A  ++ E  EAI   +KA+E + +     +ER   N             
Sbjct: 463 DAYESFYNKGLALQSMKEYNEAINAYNKAIEIKSD-----YERAWYN------------- 504

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
                           LG +L ++  Y+ A +A+ KA+Q   ++  AW         L  
Sbjct: 505 ----------------LGNSLVNLNRYEDAFKAYDKAVQYKTDYAIAWLSRGNVLIILRR 548

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +ALE   QV+  +    +A++ RG   H   ++ +AI+       I PSN E  Y   
Sbjct: 549 YPEALESFNQVIKFNPNNYQAWYGRGWSQHQNQRYAEAIESYKKAATIKPSNYEIWYSLG 608

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
           +  + + +Y+EAI  Y+ A+      +E +      L  L  Y++ IA Y
Sbjct: 609 NSQYILQQYQEAIASYNKAVRYRPKHIESWYSRGNALFSLKQYKEAIASY 658



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 129/313 (41%), Gaps = 77/313 (24%)

Query: 380 SVDFRLSRGIAQVNEGK-------YASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           +VD R     A   +GK       Y  A++ +D+ ++  P Y EA  GRG +    +   
Sbjct: 355 AVDIRPDYAPAWQGKGKTLFRLKQYQDALTAYDKAIQIQPDYVEAWSGRGFSLQNLQRYS 414

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI+ F +A+Q N +  E W  RG+A + L +  +AI+   KA+EF  ++ +  + +G+ 
Sbjct: 415 EAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKSYDKAIEFNSDAYESFYNKGLA 474

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-- 550
               K++N A+   +  +++  + + A+  LG +L ++  Y+ A +A+ KA+Q   ++  
Sbjct: 475 LQSMKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLNRYEDAFKAYDKAVQYKTDYAI 534

Query: 551 ------------------LEAWGHLTQF----YQ-------------------------- 562
                             LE++  + +F    YQ                          
Sbjct: 535 AWLSRGNVLIILRRYPEALESFNQVIKFNPNNYQAWYGRGWSQHQNQRYAEAIESYKKAA 594

Query: 563 -----------DLANSEKALECLQQ--------VLYIDKRFSKAYHLRGLLLHGLGQHKK 603
                       L NS+  L+  Q+        V Y  K   ++++ RG  L  L Q+K+
Sbjct: 595 TIKPSNYEIWYSLGNSQYILQQYQEAIASYNKAVRYRPKHI-ESWYSRGNALFSLKQYKE 653

Query: 604 AIKDLSSGLGIDP 616
           AI      +   P
Sbjct: 654 AIASYEQAIKHKP 666



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 82/171 (47%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N+A  L ++G   F+ + +  A+      V +  +   A+   G  L  + +Y+ A  A+
Sbjct: 327 NNATDLAKKGNTFFELQRYKDALSAYEQAVDIRPDYAPAWQGKGKTLFRLKQYQDALTAY 386

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            KAIQ+  +++EAW       Q+L    +A+    + L +++ + + ++ RG     L Q
Sbjct: 387 DKAIQIQPDYVEAWSGRGFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQ 446

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           + +AIK     +  +    E  Y +     ++ EY EAI  Y+ A++++ D
Sbjct: 447 YDQAIKSYDKAIEFNSDAYESFYNKGLALQSMKEYNEAINAYNKAIEIKSD 497



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/198 (19%), Positives = 90/198 (45%)

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           ++G     L    +A+    +A++  P+ A     +G   F+ K +  A+      +++ 
Sbjct: 334 KKGNTFFELQRYKDALSAYEQAVDIRPDYAPAWQGKGKTLFRLKQYQDALTAYDKAIQIQ 393

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +   A++  G +L ++  Y +A  +  KA+QL+ N+ E W    + + +L   ++A++ 
Sbjct: 394 PDYVEAWSGRGFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKS 453

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             + +  +    ++++ +GL L  + ++ +AI   +  + I        Y   +    + 
Sbjct: 454 YDKAIEFNSDAYESFYNKGLALQSMKEYNEAINAYNKAIEIKSDYERAWYNLGNSLVNLN 513

Query: 634 EYREAIKDYDAALDLELD 651
            Y +A K YD A+  + D
Sbjct: 514 RYEDAFKAYDKAVQYKTD 531



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 8/170 (4%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G     +  YK A  A+ +A+ +  ++  AW    +    L   + AL    + + I   
Sbjct: 336 GNTFFELQRYKDALSAYEQAVDIRPDYAPAWQGKGKTLFRLKQYQDALTAYDKAIQIQPD 395

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           + +A+  RG  L  L ++ +AI      L ++ +  E    R   +  + +Y +AIK YD
Sbjct: 396 YVEAWSGRGFSLQNLQRYSEAIASFDKALQLNENYPEVWNARGEAFSNLKQYDQAIKSYD 455

Query: 644 AALDLELDSMEKF-----VLQCLAFYQKEIALYT-ASKINSEF--CWFDI 685
            A++   D+ E F      LQ +  Y + I  Y  A +I S++   W+++
Sbjct: 456 KAIEFNSDAYESFYNKGLALQSMKEYNEAINAYNKAIEIKSDYERAWYNL 505



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 18/149 (12%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +L  + KAI+I      Q   ++    R F    L+ +   I   DKALQL+    + + 
Sbjct: 382 ALTAYDKAIQI------QPDYVEAWSGRGFSLQNLQRYSEAIASFDKALQLNENYPEVWN 435

Query: 108 LKGCAFSALGRKEEALSVWEK-------GYEHALHQSADLKQFLELEELLTAAKQDRSVT 160
            +G AFS L + ++A+  ++K        YE   ++   L+   E  E + A  +   + 
Sbjct: 436 ARGEAFSNLKQYDQAIKSYDKAIEFNSDAYESFYNKGLALQSMKEYNEAINAYNKAIEIK 495

Query: 161 CEYD-----VSNSMSSLTVSESGLNANDK 184
            +Y+     + NS+ +L   E    A DK
Sbjct: 496 SDYERAWYNLGNSLVNLNRYEDAFKAYDK 524


>gi|158335983|ref|YP_001517157.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris marina MBIC11017]
 gi|158306224|gb|ABW27841.1| serine/threonine kinase with TPR repeats [Acaryochloris marina
           MBIC11017]
          Length = 810

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/275 (28%), Positives = 131/275 (47%), Gaps = 7/275 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  AI+ FD +LK+ P    A   RG  R      +AAISD+ EA+  +P   E +  
Sbjct: 389 GKYPEAIAQFDTLLKQQPKTAAAFRERGEIRFATGGYQAAISDYNEALTLDPKDAETYNH 448

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A+  LG+   AI D  KA+  +PN A      G V F      AAV++L   ++ + 
Sbjct: 449 RGDAQVELGKYEAAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAES 508

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            + SA+   G   S +G+ + AE+   KA++L     + +         L   + A+   
Sbjct: 509 NHLSAHVNRGSYRSVLGDPEGAEQDWEKALKLPVRTAKDYASRGYAKSRLDRKQDAIADY 568

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q L I+ + ++A+   G + +  G+ ++A +     L I+P++     LR       G+
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRGELRAYQGQ 628

Query: 635 ---YREAIKDYDAALDLELDSMEKFVL--QCLAFY 664
              +  A++DYD A  + ++  + FVL  +C A +
Sbjct: 629 QADFEGALQDYDRA--IAINPKDPFVLNNRCGALF 661



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 131/265 (49%), Gaps = 3/265 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG AQV  GKY +AI+ + + ++  P   +  +  G+    Q +LEAA+ +  +AIQ+  
Sbjct: 449 RGDAQVELGKYEAAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAES 508

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   A   RG  R+ LG+   A QD  KAL+    +A     RG    +      A+ D 
Sbjct: 509 NHLSAHVNRGSYRSVLGDPEGAEQDWEKALKLPVRTAKDYASRGYAKSRLDRKQDAIADY 568

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQD 563
           +  + ++ +   A+T LG      GE ++A ++  +A+Q++ N   A+   G L  +   
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRGELRAYQGQ 628

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            A+ E AL+   + + I+ +     + R   L  L + ++A+ D + GL I+PS+     
Sbjct: 629 QADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRALADCNKGLEINPSSAALYT 688

Query: 624 LRASCYHAIGEYREAIKDYDAALDL 648
           +R + Y  + +Y +AI+DY   + +
Sbjct: 689 VRGNIYLRLKQYEKAIQDYGRTIQI 713



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 133/320 (41%), Gaps = 11/320 (3%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G + SA   F+Q L+    Y EA +  G   A   +   AI+ F   ++  P    A++ 
Sbjct: 355 GNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPEAIAQFDTLLKQQPKTAAAFRE 414

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG+ R A G    AI D ++AL  +P  A+  + RG    +   + AA+ D    ++L  
Sbjct: 415 RGEIRFATGGYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEAAIADYRKAIRLQP 474

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
                Y  LG      G+ + A +   KAIQ + N L A  +   +   L + E A +  
Sbjct: 475 NQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRGSYRSVLGDPEGAEQDW 534

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++ L +  R +K Y  RG     L + + AI D +  L I+P            ++  GE
Sbjct: 535 EKALKLPVRTAKDYASRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVFYEQGE 594

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDI----- 689
             +A + +D AL +  +S   ++L+       E+  Y   + + E    D D  I     
Sbjct: 595 IEQARQSFDQALQINPNSTSAYLLRG------ELRAYQGQQADFEGALQDYDRAIAINPK 648

Query: 690 DPLFKEYWCKRLHPKNVCEK 709
           DP      C  L   N  ++
Sbjct: 649 DPFVLNNRCGALFSLNELQR 668



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 102/241 (42%), Gaps = 36/241 (14%)

Query: 376 SKSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +++++++ +L+R     G     +G+   A   FDQ L+ +P    A + RG  RA+Q +
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRGELRAYQGQ 628

Query: 431 ---LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
               E A+ D+  AI  NP        R  A  +L E   A+ D +K LE  P+SA +  
Sbjct: 629 QADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRALADCNKGLEINPSSAALYT 688

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG +  + K +  A++D    ++++   KS        + S   Y     A ++   LD
Sbjct: 689 VRGNIYLRLKQYEKAIQDYGRTIQINDTRKS-------EVRSQAAYSNRASARIQLKDLD 741

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
                                 AL+ L   L I    ++ Y+ RGLL     + + AI D
Sbjct: 742 ---------------------GALQDLNDALRIKPDAAEDYYKRGLLYSVQNKRQDAITD 780

Query: 608 L 608
           L
Sbjct: 781 L 781



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 111/275 (40%), Gaps = 16/275 (5%)

Query: 390 AQVNEGKYASAISI-------FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           A VN G Y S +         +++ LK      +    RG A++     + AI+D+ +A+
Sbjct: 513 AHVNRGSYRSVLGDPEGAEQDWEKALKLPVRTAKDYASRGYAKSRLDRKQDAIADYNQAL 572

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV---NFKFKDF 499
             NP    A    G      GE  +A Q   +AL+  PNS      RG +     +  DF
Sbjct: 573 TINPQLTRAHTNLGGVFYEQGEIEQARQSFDQALQINPNSTSAYLLRGELRAYQGQQADF 632

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A++D    + ++ ++         AL S+ E ++A     K ++++ +    +     
Sbjct: 633 EGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRALADCNKGLEINPSSAALYTVRGN 692

Query: 560 FYQDLANSEKALECLQQVLYIDK------RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
            Y  L   EKA++   + + I+       R   AY  R      L     A++DL+  L 
Sbjct: 693 IYLRLKQYEKAIQDYGRTIQINDTRKSEVRSQAAYSNRASARIQLKDLDGALQDLNDALR 752

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           I P   E  Y R   Y    + ++AI D   A DL
Sbjct: 753 IKPDAAEDYYKRGLLYSVQNKRQDAITDLKKAADL 787


>gi|414079262|ref|YP_007000686.1| hypothetical protein ANA_C20172 [Anabaena sp. 90]
 gi|413972541|gb|AFW96629.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 619

 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 112/220 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG +     KY  A S F Q ++ D  Y EA   R       +    A+ D  +A++ +P
Sbjct: 360 RGRSYYELSKYEDAFSDFTQAIELDSDYVEAYGNRSAVSYRLKNYRKALQDSNKALKIDP 419

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S  +A+  RGQAR  L +   AIQD +K++ F+P      + RG+  ++ +D+  A+ED 
Sbjct: 420 SCADAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMVLAYNNRGLAKYEIEDYQGAIEDC 479

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +KLD     AY   GLA+  I +Y +A +   +AI+LD    +++    + +  L N
Sbjct: 480 TEALKLDPNCALAYNNRGLAMYEIKDYHRAIDDCNQAIKLDSKLAQSYYIRGKSHLGLRN 539

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
              AL  + Q + I+   ++AY  +G +    G+ K+AI+
Sbjct: 540 LGSALSDIDQAIQINPEIAEAYTDKGFIHLISGRKKEAIQ 579



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 2/259 (0%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI  F++ +  +   P+    RG +     + E A SDFT+AI+ +    EA+  
Sbjct: 334 GNYEEAIENFNEAINCNNNDPQIYNMRGRSYYELSKYEDAFSDFTQAIELDSDYVEAYGN 393

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R      L    +A+QD +KAL+ +P+ AD    RG      K +  A++D +  +  D 
Sbjct: 394 RSAVSYRLKNYRKALQDSNKALKIDPSCADAYLNRGQAREGLKQYKGAIQDYTKSISFDP 453

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
               AY   GLA   I +Y+ A E   +A++LD N   A+ +      ++ +  +A++  
Sbjct: 454 GMVLAYNNRGLAKYEIEDYQGAIEDCTEALKLDPNCALAYNNRGLAMYEIKDYHRAIDDC 513

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI-G 633
            Q + +D + +++Y++RG    GL     A+ D+   + I+P   E  Y      H I G
Sbjct: 514 NQAIKLDSKLAQSYYIRGKSHLGLRNLGSALSDIDQAIQINPEIAEA-YTDKGFIHLISG 572

Query: 634 EYREAIKDYDAALDLELDS 652
             +EAI+ Y  +L L L +
Sbjct: 573 RKKEAIQFYKISLHLHLKT 591



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 111/225 (49%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI +F EAI  N +  + +  RG++   L +  +A  D ++A+E + +  +    R  
Sbjct: 337 EEAIENFNEAINCNNNDPQIYNMRGRSYYELSKYEDAFSDFTQAIELDSDYVEAYGNRSA 396

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V+++ K++  A++D +  +K+D     AY   G A   + +YK A + + K+I  D   +
Sbjct: 397 VSYRLKNYRKALQDSNKALKIDPSCADAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMV 456

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A+ +      ++ + + A+E   + L +D   + AY+ RGL ++ +  + +AI D +  
Sbjct: 457 LAYNNRGLAKYEIEDYQGAIEDCTEALKLDPNCALAYNNRGLAMYEIKDYHRAIDDCNQA 516

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           + +D    +  Y+R   +  +     A+ D D A+ +  +  E +
Sbjct: 517 IKLDSKLAQSYYIRGKSHLGLRNLGSALSDIDQAIQINPEIAEAY 561



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 126/277 (45%), Gaps = 11/277 (3%)

Query: 397 YASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS-------A 448
           Y  AI  +  I+   P +YP A   RG A       +AAI DF + I   P         
Sbjct: 229 YKEAIEFYTAIINIKPDLYP-AYHYRGYAYYLLDNYQAAIDDFRQIIHFKPHNLLTYLLL 287

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
              + ++   +AAL +   AI  L+  L+ E +    +    I N K  ++  A+E+ + 
Sbjct: 288 TSVFIKKLDYQAALEQCKIAII-LNNHLDKELDILIYIQCGWIFN-KIGNYEEAIENFNE 345

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            +  +  +   Y   G +   + +Y+ A     +AI+LD +++EA+G+ +     L N  
Sbjct: 346 AINCNNNDPQIYNMRGRSYYELSKYEDAFSDFTQAIELDSDYVEAYGNRSAVSYRLKNYR 405

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           KAL+   + L ID   + AY  RG    GL Q+K AI+D +  +  DP  +     R   
Sbjct: 406 KALQDSNKALKIDPSCADAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMVLAYNNRGLA 465

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            + I +Y+ AI+D   AL L+ +    +  + LA Y+
Sbjct: 466 KYEIEDYQGAIEDCTEALKLDPNCALAYNNRGLAMYE 502



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 5/239 (2%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI  +T  I   P    A+  RG A   L     AI D  + + F+P++         V 
Sbjct: 232 AIEFYTAIINIKPDLYPAYHYRGYAYYLLDNYQAAIDDFRQIIHFKPHNLLTYLLLTSVF 291

Query: 494 FKFKDFNAAVEDLSACV----KLDKE-NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            K  D+ AA+E     +     LDKE +   Y   G   + IG Y++A E   +AI  + 
Sbjct: 292 IKKLDYQAALEQCKIAIILNNHLDKELDILIYIQCGWIFNKIGNYEEAIENFNEAINCNN 351

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N  + +    + Y +L+  E A     Q + +D  + +AY  R  + + L  ++KA++D 
Sbjct: 352 NDPQIYNMRGRSYYELSKYEDAFSDFTQAIELDSDYVEAYGNRSAVSYRLKNYRKALQDS 411

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           +  L IDPS  +    R      + +Y+ AI+DY  ++  +   +  +  + LA Y+ E
Sbjct: 412 NKALKIDPSCADAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMVLAYNNRGLAKYEIE 470



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 70/140 (50%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  L+RG A+    +Y  AI  + + +  DP    A   RG A+    + + AI D TEA
Sbjct: 423 DAYLNRGQAREGLKQYKGAIQDYTKSISFDPGMVLAYNNRGLAKYEIEDYQGAIEDCTEA 482

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++ +P+   A+  RG A   + +   AI D ++A++ +   A   + RG  +   ++  +
Sbjct: 483 LKLDPNCALAYNNRGLAMYEIKDYHRAIDDCNQAIKLDSKLAQSYYIRGKSHLGLRNLGS 542

Query: 502 AVEDLSACVKLDKENKSAYT 521
           A+ D+   ++++ E   AYT
Sbjct: 543 ALSDIDQAIQINPEIAEAYT 562


>gi|443476573|ref|ZP_21066472.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
 gi|443018443|gb|ELS32690.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
          Length = 822

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 163/346 (47%), Gaps = 33/346 (9%)

Query: 329 SKSSISDNKSSDSTESRSKLSFKWDMLKET---------SNEAKRNKKFCVTRISKSKSI 379
           ++SS+ + + +     R++  ++W++             ++  +R KK  V +I KS ++
Sbjct: 376 AQSSLGNEQKALEDFDRARFDYEWNLRSRGGSRRDREYYADVLQRPKKAPVEQI-KSPTL 434

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S       G A    G Y  AI+ + + ++  P + +A   RG A+    + + AISD++
Sbjct: 435 S----YQSGNANSRVGNYRQAIADYSEAIRLKPDFADAFNNRGNAKYNLEDKQGAISDYS 490

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           EAI+  P +  A+  RG A++ LG+   AI D ++A+  +PN AD  + RG       D 
Sbjct: 491 EAIRLKPDSINAFNNRGNAKSDLGDKEGAIADYNEAIRIKPNYADAYNGRGNAKSALGDQ 550

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
              + D +  +++  ++  AY   G A S++G+ + A     +AI+L+ NFL       Q
Sbjct: 551 QGPIADFNEAIRISPDHYKAYNNRGNARSALGDKQGAIADFNEAIRLNSNFL-------Q 603

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG--QHKKAIKDLSSGLGIDPS 617
            Y++ +NS+K L   Q  +     F         +  G+     K AI D    + +DPS
Sbjct: 604 VYKNRSNSKKYLGDEQGAIADRIEF---------IQQGVSSKNEKVAISDYDELMRLDPS 654

Query: 618 NIECLYL-RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           N    Y  RA     + +Y+ AI DY+  +  E ++ + +  +  A
Sbjct: 655 NKSKYYSGRARIKLKLEDYQGAISDYNEVIRAEPNNADSYSSRAFA 700



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 6/129 (4%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI-GRGTARAFQRELEAAISDFTEAIQ 443
           + +G++  NE     AIS +D++++ DP        GR   +    + + AISD+ E I+
Sbjct: 629 IQQGVSSKNE---KVAISDYDELMRLDPSNKSKYYSGRARIKLKLEDYQGAISDYNEVIR 685

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN--SADILHERGIVNFKFKDFNA 501
           + P+  +++  R  A+  +     AI D ++A+       + D  + RG    + KD+  
Sbjct: 686 AEPNNADSYSSRAFAKLRISNYQGAIDDCTQAIRISQGYENYDYYYIRGDAKLELKDYQG 745

Query: 502 AVEDLSACV 510
           A++D +  V
Sbjct: 746 AIDDYNQVV 754



 Score = 46.6 bits (109), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 70/332 (21%), Positives = 135/332 (40%), Gaps = 57/332 (17%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA--------- 426
           SK +S      R I +   G Y  AI+ + ++++ +P   +A   R TA+          
Sbjct: 57  SKRLSAQQLHDRAIKKRQGGDYEGAIADYTELIRLEPTNAKAYNDRATAKKEIASERKFG 116

Query: 427 -FQ---RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
            FQ    +L+ A++D  EAI+        +  R + +  + +   ++ D  +A+  EP++
Sbjct: 117 DFQAKITDLKGALADNNEAIRLELQNASFYSSRAETKQKMNDFNGSLADYKEAMRLEPSN 176

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL--------------- 527
            D    R  +     D+ AA+ D    ++L       + Y   A+               
Sbjct: 177 DDFYRNRAALFVAISDYQAALADYDEAIRLKPR---GFNYFVRAIFKEDLIKQQFRETPE 233

Query: 528 ---SSIGEYKK----AEEAHLKAIQLDRNFLEAWGHLTQFYQD-LANSEKALECLQQVLY 579
              S + +Y K    A++++ K I      +  +  L  F  D + + + AL  L + + 
Sbjct: 234 FKDSVVDDYTKCIQTADKSYDKHI-----LIGCYNALATFNIDEIQDYDGALAILNEAIR 288

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL---RASCYHAIGEYR 636
           ++ + S  Y  R         ++ A+ D +  + +D   +   Y+   RA  Y  + + +
Sbjct: 289 LNSKDSSLYASRAFAKIETRDYRGALADANEAISLDHKFVRA-YISLGRAKSY--LRDNQ 345

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLA---FYQ 665
            A+ DYD A  L     +K+ L  LA   +YQ
Sbjct: 346 GALADYDRAYPL----FDKWALNNLARISYYQ 373



 Score = 44.3 bits (103), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 80/207 (38%), Gaps = 57/207 (27%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A+   G     I+ F++ ++  P + +A   RG AR+   + + AI+DF EAI+ N 
Sbjct: 540 RGNAKSALGDQQGPIADFNEAIRISPDHYKAYNNRGNARSALGDKQGAIADFNEAIRLNS 599

Query: 447 SAGEAWKRR-------GQARAALGESVEAIQ----------------------------- 470
           +  + +K R       G  + A+ + +E IQ                             
Sbjct: 600 NFLQVYKNRSNSKKYLGDEQGAIADRIEFIQQGVSSKNEKVAISDYDELMRLDPSNKSKY 659

Query: 471 -------------------DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
                              D ++ +  EPN+AD    R     +  ++  A++D +  ++
Sbjct: 660 YSGRARIKLKLEDYQGAISDYNEVIRAEPNNADSYSSRAFAKLRISNYQGAIDDCTQAIR 719

Query: 512 LDK--ENKSAYTYLGLALSSIGEYKKA 536
           + +  EN   Y   G A   + +Y+ A
Sbjct: 720 ISQGYENYDYYYIRGDAKLELKDYQGA 746


>gi|154341943|ref|XP_001566923.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134064248|emb|CAM40447.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 849

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 131/291 (45%), Gaps = 5/291 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+     G+  +A++++ + L+  P + +AL  R       +    AI D+T A++ +P
Sbjct: 417 RGLQHRQSGELEAAVAMYTKALEISPTHFKALFNRAFCEDKLKNYARAIDDYTAALELDP 476

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +   G +    G    A+Q  ++A+E + +  D  H RG +  K   + AA+ D 
Sbjct: 477 RNPFTYYNLGISYDHTGSHARAVQAFTRAIELDDHHPDFFHNRGFMQRKQGAYTAAIADY 536

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +A + LD  +  ++       + +G Y +A   +  A+++D +    + +       L  
Sbjct: 537 TAAIFLDPNHFKSHYNRAYCFAKLGYYDEAVADYTAALKIDSDNSNVYHNRGAALAKLGK 596

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              A+E   + L  D + + + + RGL+   L Q+ +A+ D +  + +D  N   L+ R 
Sbjct: 597 LRAAVEDFNRALKRDPKLAFSLNARGLVYDQLQQYDRAVADFTEAIRLDKRNPTWLHNRG 656

Query: 627 SCYHAIGEYREAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIALYT 672
             Y  +GE   AI DY AA+ +        S   + L+ L  Y+  I  YT
Sbjct: 657 HTYRNMGELELAIADYSAAIKMAPHGHTTYSSRAYALRKLGRYEAAIEDYT 707



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 1/266 (0%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF  +RG  Q  +G Y +AI+ +   +  DP + ++   R    A     + A++D+T A
Sbjct: 514 DFFHNRGFMQRKQGAYTAAIADYTAAIFLDPNHFKSHYNRAYCFAKLGYYDEAVADYTAA 573

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++ +      +  RG A A LG+   A++D ++AL+ +P  A  L+ RG+V  + + ++ 
Sbjct: 574 LKIDSDNSNVYHNRGAALAKLGKLRAAVEDFNRALKRDPKLAFSLNARGLVYDQLQQYDR 633

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           AV D +  ++LDK N +     G    ++GE + A   +  AI++  +    +       
Sbjct: 634 AVADFTEAIRLDKRNPTWLHNRGHTYRNMGELELAIADYSAAIKMAPHGHTTYSSRAYAL 693

Query: 562 QDLANSEKALECLQQVLYIDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           + L   E A+E   + L       +K  + R      L   + AI+D S  L  DP +  
Sbjct: 694 RKLGRYEAAIEDYTKALNEQPGVRTKVLNSRAYCFARLNLFEYAIRDYSEVLATDPVDAH 753

Query: 621 CLYLRASCYHAIGEYREAIKDYDAAL 646
            LY R   +   G+Y  AI D+  A+
Sbjct: 754 ALYNRGISFEMCGKYSAAIDDFTRAI 779



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 34/201 (16%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           + +RG      GE   A+   +KALE  P     L  R     K K++  A++D +A ++
Sbjct: 414 FYQRGLQHRQSGELEAAVAMYTKALEISPTHFKALFNRAFCEDKLKNYARAIDDYTAALE 473

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           LD  N   Y  LG++    G + +A +A  +AI+LD        H   F+          
Sbjct: 474 LDPRNPFTYYNLGISYDHTGSHARAVQAFTRAIELD-------DHHPDFF---------- 516

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
                            H RG +    G +  AI D ++ + +DP++ +  Y RA C+  
Sbjct: 517 -----------------HNRGFMQRKQGAYTAAIADYTAAIFLDPNHFKSHYNRAYCFAK 559

Query: 632 IGEYREAIKDYDAALDLELDS 652
           +G Y EA+ DY AAL ++ D+
Sbjct: 560 LGYYDEAVADYTAALKIDSDN 580



 Score = 48.9 bits (115), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 5/94 (5%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ---SN 445
            A++N  +YA  I  + ++L  DP+   AL  RG +     +  AAI DFT AI+     
Sbjct: 728 FARLNLFEYA--IRDYSEVLATDPVDAHALYNRGISFEMCGKYSAAIDDFTRAIRRAPEA 785

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           PS   A+  RG +R  L +  +A+ DL +AL  +
Sbjct: 786 PSTANAYYSRGTSRLQLHQVPQAVGDLKQALRLD 819



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 79/200 (39%), Gaps = 38/200 (19%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+      +Y  A++ F + ++ D   P  L  RG       ELE AI+D++ AI+  
Sbjct: 620 ARGLVYDQLQQYDRAVADFTEAIRLDKRNPTWLHNRGHTYRNMGELELAIADYSAAIKMA 679

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE----------------------FE---- 479
           P     +  R  A   LG    AI+D +KAL                       FE    
Sbjct: 680 PHGHTTYSSRAYALRKLGRYEAAIEDYTKALNEQPGVRTKVLNSRAYCFARLNLFEYAIR 739

Query: 480 ---------PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS---AYTYLGLAL 527
                    P  A  L+ RGI       ++AA++D +  ++   E  S   AY   G + 
Sbjct: 740 DYSEVLATDPVDAHALYNRGISFEMCGKYSAAIDDFTRAIRRAPEAPSTANAYYSRGTSR 799

Query: 528 SSIGEYKKAEEAHLKAIQLD 547
             + +  +A     +A++LD
Sbjct: 800 LQLHQVPQAVGDLKQALRLD 819



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 13/109 (11%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYP-------------EALIGRGTARAFQRE 430
           RL R  A V    YASA +  +  +++    P             EAL  RG  RA   +
Sbjct: 48  RLLRAKAYVQLHNYASACADLESWIQKTGYTPPDTSGDVAADSLTEALFYRGVCRARLSQ 107

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           ++ A+ DFTE +Q  P    A   R    A L + V AI D   AL+ +
Sbjct: 108 VKDAVGDFTEVLQREPGHRRAQYERAACHARLDDYVNAIADYEAALQMD 156



 Score = 42.4 bits (98), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 10/99 (10%)

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
           LE+W   T +     + + A + L + L+           RG+    L Q K A+ D + 
Sbjct: 68  LESWIQKTGYTPPDTSGDVAADSLTEALFY----------RGVCRARLSQVKDAVGDFTE 117

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            L  +P +    Y RA+C+  + +Y  AI DY+AAL ++
Sbjct: 118 VLQREPGHRRAQYERAACHARLDDYVNAIADYEAALQMD 156


>gi|21228450|ref|NP_634372.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
 gi|20906930|gb|AAM32044.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
          Length = 412

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 114/227 (50%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A+  +D +LKE+  Y EA  G+G A       + AI  + +A++ +P   EAW  
Sbjct: 181 GRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYY 240

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G    +LG   +A++   KA+E +P + D  +  GI     + ++ A+      ++++ 
Sbjct: 241 KGVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINS 300

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           EN   +   G  LS +  + +A EA+ KA+QLD  +LEA+  L      L   E+AL+  
Sbjct: 301 ENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIY 360

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           ++ L +D   + ++  + + L  LG+ ++A       + IDP   E 
Sbjct: 361 EKALKLDPEAADSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEI 407



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 145/304 (47%), Gaps = 8/304 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+  +  GKY  AI  F++ + +DP     L  +  A       E A+  + EA++ N  
Sbjct: 72  GLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVKINSE 131

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             + W     + + +GE  +A++   KAL+ +P+  +  + + +   +   +  AV+   
Sbjct: 132 DADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYD 191

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +K +   K A+   G+AL  +G Y +A  A+ KA+++D  FLEAW +       L + 
Sbjct: 192 IVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSF 251

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++AL+  ++ + ID     A++  G+ L  L ++ +AI      + I+  N +  Y +  
Sbjct: 252 KQALKAYEKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGF 311

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEK-----FVLQCLAFYQKEIALY-TASKINSEFC 681
               +  + EA++ Y  A+ L+ + +E      FVL  L  +++ + +Y  A K++ E  
Sbjct: 312 TLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAA 371

Query: 682 --WF 683
             WF
Sbjct: 372 DSWF 375



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 119/255 (46%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A+  + + L   P YP A  G+    +     E A+  +   ++ N +  EAW  
Sbjct: 147 GEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYDIVLKENSNYKEAWAG 206

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   +G   EAI    KALE +P   +  + +G+       F  A++     V++D 
Sbjct: 207 KGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEIDP 266

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           EN  A+  +G+ L ++  Y +A  A  KAI+++    + W +       +   ++A+E  
Sbjct: 267 ENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAY 326

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++ + +D  + +AY   G +L  L + ++A+      L +DP   +  + +A C   +G 
Sbjct: 327 RKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAVCLSYLGR 386

Query: 635 YREAIKDYDAALDLE 649
             EA   Y  A++++
Sbjct: 387 EEEAEDAYRKAVEID 401



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 98/201 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +GIA    G Y  AI  +D+ L+ DP + EA   +G         + A+  + +A++ +
Sbjct: 206 GKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEID 265

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW   G     L    EAI    KA+E    ++D+ + +G    + + F+ AVE 
Sbjct: 266 PENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEA 325

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               V+LD E   AY+ LG  L+ +  +++A + + KA++LD    ++W         L 
Sbjct: 326 YRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAVCLSYLG 385

Query: 566 NSEKALECLQQVLYIDKRFSK 586
             E+A +  ++ + ID R+++
Sbjct: 386 REEEAEDAYRKAVEIDPRYAE 406



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/234 (21%), Positives = 101/234 (43%), Gaps = 40/234 (17%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L+E G+   +   +N A+      +  D  N         AL S+G +++A + + +A++
Sbjct: 68  LNECGLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVK 127

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVL-----YIDKRFSKAYHL---------- 590
           ++    + W ++   Y  +   EKA+E   + L     Y +  + KA +L          
Sbjct: 128 INSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAV 187

Query: 591 -------------------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
                              +G+ L  +G + +AI      L IDP  +E  Y +     +
Sbjct: 188 DAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDS 247

Query: 632 IGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEI-ALYTASKINSE 679
           +G +++A+K Y+ A++++ ++ + +      L+ L  Y + I A   A +INSE
Sbjct: 248 LGSFKQALKAYEKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINSE 301



 Score = 47.4 bits (111), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L +L  + +AI   +  +  + E  D+  N+ F  SQ++     +    KA+QLDP  L+
Sbjct: 279 LENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLE 338

Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
           AY   G   + L R EEAL ++EK
Sbjct: 339 AYSSLGFVLAQLKRFEEALDIYEK 362



 Score = 40.4 bits (93), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 49/104 (47%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   ++G       ++  A+  + + ++ DP Y EA    G   A  +  E A+  + +A
Sbjct: 304 DVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKA 363

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           ++ +P A ++W  +    + LG   EA     KA+E +P  A+I
Sbjct: 364 LKLDPEAADSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEI 407



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
           RL K ++ I   ++ +  D      +  +   A L SL  + +A+++    +  + E  D
Sbjct: 77  RLGKYNEAIIAFEKAIDKDPGNIYLLNNKA--AALESLGRFEEALKLYQEAVKINSEDAD 134

Query: 72  ICNR-AFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
           + N  AF YSQ+  ++  +    KAL L P    A+  K    S  GR EEA+      Y
Sbjct: 135 LWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDA----Y 190

Query: 131 EHALHQSADLKQ 142
           +  L ++++ K+
Sbjct: 191 DIVLKENSNYKE 202



 Score = 40.0 bits (92), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 30/59 (50%)

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
             +     Q+  +   I   DKAL++DP  L+A+  KG    +LG  ++AL  +EK  E
Sbjct: 205 AGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVE 263


>gi|158341361|ref|YP_001522526.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158311602|gb|ABW33212.1| TPR repeat-containing protein [Acaryochloris marina MBIC11017]
          Length = 505

 Score =  100 bits (250), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 2/219 (0%)

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           Q N+ K  +AI ++ + ++ +  Y  A   RG  R    + + AI+DF +AIQ NP    
Sbjct: 262 QQNDNK--AAIELYTRAIRLNADYANAYNNRGLLRQNFNDNKGAIADFEKAIQLNPDDSF 319

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+  RG A + LG+   AI D SKA++  P +A   + RGI  ++  D   A+ D    +
Sbjct: 320 AYNNRGNALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGAIADFEKTI 379

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           +L+ +N  AY   G ALS +G+   A   + KAIQL+ ++  A+ +       L++   A
Sbjct: 380 QLNPDNALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNRGNTRFRLSDPNGA 439

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           +    + + ++   + AY+ R ++   LG  K AI D++
Sbjct: 440 ITDYDKAIQLNPDHAGAYYNRAIVRRSLGDRKGAIADMT 478



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 98/221 (44%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q + +AAI  +T AI+ N     A+  RG  R    ++  AI D  KA++  P+ +   +
Sbjct: 263 QNDNKAAIELYTRAIRLNADYANAYNNRGLLRQNFNDNKGAIADFEKAIQLNPDDSFAYN 322

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG    +  D   A+ D S  ++L+  N  AY   G+    +G+ + A     K IQL+
Sbjct: 323 NRGNALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGAIADFEKTIQLN 382

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +   A+ +      +L +   A+    + + ++  +  AY+ RG     L     AI D
Sbjct: 383 PDNALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNRGNTRFRLSDPNGAITD 442

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
               + ++P +    Y RA    ++G+ + AI D   A  L
Sbjct: 443 YDKAIQLNPDHAGAYYNRAIVRRSLGDRKGAIADMTEAAQL 483



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 77/161 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G    AI+ + + ++ +P+   A   RG  R    +   AI+DF + IQ N
Sbjct: 323 NRGNALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGAIADFEKTIQLN 382

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A + LG+   AI D  KA++  P+     + RG   F+  D N A+ D
Sbjct: 383 PDNALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNRGNTRFRLSDPNGAITD 442

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
               ++L+ ++  AY    +   S+G+ K A     +A QL
Sbjct: 443 YDKAIQLNPDHAGAYYNRAIVRRSLGDRKGAIADMTEAAQL 483



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 4/206 (1%)

Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
           W +  E + +   NK   +   +++  ++ D+  +   RG+ + N      AI+ F++ +
Sbjct: 253 WFLRAEKARQQNDNKA-AIELYTRAIRLNADYANAYNNRGLLRQNFNDNKGAIADFEKAI 311

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           + +P    A   RG A +   + E AI+D+++AIQ NP    A+  RG  R  LG++  A
Sbjct: 312 QLNPDDSFAYNNRGNALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGA 371

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I D  K ++  P++A   + RG    +  D N A+ D    ++L+ +   AY   G    
Sbjct: 372 IADFEKTIQLNPDNALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNRGNTRF 431

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAW 554
            + +   A   + KAIQL+ +   A+
Sbjct: 432 RLSDPNGAITDYDKAIQLNPDHAGAY 457



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 34/184 (18%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AI+  ++A+    + A+  + RG++   F D   A+ D    ++L+ ++  AY   G AL
Sbjct: 269 AIELYTRAIRLNADYANAYNNRGLLRQNFNDNKGAIADFEKAIQLNPDDSFAYNNRGNAL 328

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
           S +G+ + A   + KAIQL  N + A                                 A
Sbjct: 329 SELGDREGAIADYSKAIQL--NPVNAG--------------------------------A 354

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y+ RG+  + LG ++ AI D    + ++P N      R +    +G+   AI DYD A+ 
Sbjct: 355 YYNRGIDRYRLGDNRGAIADFEKTIQLNPDNALAYNNRGNALSELGDLNGAIADYDKAIQ 414

Query: 648 LELD 651
           L  D
Sbjct: 415 LNPD 418



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 7/167 (4%)

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           K A E + +AI+L+ ++  A+ +     Q+  +++ A+   ++ + ++   S AY+ RG 
Sbjct: 267 KAAIELYTRAIRLNADYANAYNNRGLLRQNFNDNKGAIADFEKAIQLNPDDSFAYNNRGN 326

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
            L  LG  + AI D S  + ++P N    Y R    + +G+ R AI D++  + L  D+ 
Sbjct: 327 ALSELGDREGAIADYSKAIQLNPVNAGAYYNRGIDRYRLGDNRGAIADFEKTIQLNPDN- 385

Query: 654 EKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                  LA+  +  AL     +N     +D    ++P +   +  R
Sbjct: 386 ------ALAYNNRGNALSELGDLNGAIADYDKAIQLNPDYPGAYYNR 426


>gi|313204456|ref|YP_004043113.1| hypothetical protein Palpr_1991 [Paludibacter propionicigenes WB4]
 gi|312443772|gb|ADQ80128.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
           propionicigenes WB4]
          Length = 301

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 1/282 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S +F   +G+   N   Y +AI  F + ++ +P   +A + RG A+ + ++    I D  
Sbjct: 20  SANFYFDKGVTAYNNRDYKTAIENFTRSIQINPRNIKAYVSRGIAKYYIQDYIGGIEDQH 79

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +A++ NP+ G+A+   G     L +   AI++ SKA+E  P        RG       DF
Sbjct: 80  KALEINPTYGDAYFNIGDCEYNLQDYTAAIENYSKAIELNPKDIMAYMSRGFTKQYINDF 139

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             AV D S  +KL       YT  G A S + ++K A + + KAIQ++ +  +A+    +
Sbjct: 140 AGAVSDFSIVIKLKPNLADGYTNRGFAKSYLEDFKGAIDDYTKAIQMNGS-ADAYFDRGK 198

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             + L + + AL    + L  + + +KA + R L    L     A++D    L IDP   
Sbjct: 199 AKEALNDHKGALSDFNKALRENAKHTKALYNRALTKISLQDTDGALEDFDKALEIDPRYA 258

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           +  Y R      +G+     +D  AA  L  +  ++ +L  L
Sbjct: 259 DAFYERGMLKIKVGQKEAGFQDLKAASGLGHEKAKRALLDLL 300



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 113/280 (40%), Gaps = 42/280 (15%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G      R+ + AI +FT +IQ NP   +A+  RG A+  + + +  I+D  KALE  P
Sbjct: 27  KGVTAYNNRDYKTAIENFTRSIQINPRNIKAYVSRGIAKYYIQDYIGGIEDQHKALEINP 86

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
              D     G   +  +D+ AA+E+ S  ++L+ ++  AY   G     I ++  A    
Sbjct: 87  TYGDAYFNIGDCEYNLQDYTAAIENYSKAIELNPKDIMAYMSRGFTKQYINDFAGAVSDF 146

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
              I+L  N  +                          Y ++ F+K+Y         L  
Sbjct: 147 SIVIKLKPNLADG-------------------------YTNRGFAKSY---------LED 172

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
            K AI D +  + ++ S        A  Y   G+ +EA+ D+  AL     ++ +     
Sbjct: 173 FKGAIDDYTKAIQMNGS--------ADAYFDRGKAKEALNDHKGALSDFNKALRENAKHT 224

Query: 661 LAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            A Y + +   +    +     FD   +IDP + + + +R
Sbjct: 225 KALYNRALTKISLQDTDGALEDFDKALEIDPRYADAFYER 264


>gi|436837943|ref|YP_007323159.1| Tetratricopeptide TPR_2 repeat protein [Fibrella aestuarina BUZ 2]
 gi|384069356|emb|CCH02566.1| Tetratricopeptide TPR_2 repeat protein [Fibrella aestuarina BUZ 2]
          Length = 450

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 141/288 (48%), Gaps = 16/288 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++  G  A+A++ F++     P     L  RG  +    +   A++DF  A++ +
Sbjct: 134 NRGLCKLQLGYSAAALNDFNRASSLSPNDANILTARGNCKNGLNDFRGALADFGLALEKS 193

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   RG +R  L +   ++ D S+A+E  P  AD+ ++RG+V  +  +F+ AV D
Sbjct: 194 PNKTTALSGRGYSRFKLEDYKGSLADFSRAIELAPTDADLFYKRGLVKTRMGEFDNAVVD 253

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+  +  AY   G   S  G  K A     K+I++D   ++   + ++F     
Sbjct: 254 YNKTLELNPNHYKAYFSRGFCRSRTGNAKVALGDLDKSIEMDNRSIQTKAYYSEFI---- 309

Query: 566 NSEKALECLQQVLYIDKRF---------SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
            ++  L     V  + +R+         + AY +RG+L +  G  K A+ DL+  + ++P
Sbjct: 310 -TQNMLPLFATV--VQERYKVAELGDDRADAYIVRGMLKNANGDSKPALLDLNRAVELNP 366

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
           ++ E  ++R     ++G+ + A+ D ++ + L     E + L+ L  Y
Sbjct: 367 TSAESYFIRGIIRSSLGDQKGAMIDCNSTVRLNPRHAEAYYLRGLIRY 414



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/300 (23%), Positives = 137/300 (45%), Gaps = 20/300 (6%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           S+  +VDF  + GI + N   +  A+  F   +  +P    +   R  A+    +++ A+
Sbjct: 23  SQQTAVDF-FNEGIQKSNAKDFTGALQAFTTAIIMNPENAPSYYNRALAKTSLNDIQGAV 81

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           SD  +AI+ NP    A+  RG  R+ L ++  A+QD ++A+E  PN A + + RG+   +
Sbjct: 82  SDLDQAIELNPQEANAYLYRGINRSKLEDNRGAMQDFNRAVELSPNDAFLYYNRGLCKLQ 141

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLE 552
                AA+ D +    L   + +  T  G   + + +++ A      A++   N    L 
Sbjct: 142 LGYSAAALNDFNRASSLSPNDANILTARGNCKNGLNDFRGALADFGLALEKSPNKTTALS 201

Query: 553 AWGH----LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             G+    L  +   LA+  +A+E       +    +  ++ RGL+   +G+   A+ D 
Sbjct: 202 GRGYSRFKLEDYKGSLADFSRAIE-------LAPTDADLFYKRGLVKTRMGEFDNAVVDY 254

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
           +  L ++P++ +  + R  C    G  + A+ D D +++     M+   +Q  A+Y + I
Sbjct: 255 NKTLELNPNHYKAYFSRGFCRSRTGNAKVALGDLDKSIE-----MDNRSIQTKAYYSEFI 309



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 107/260 (41%), Gaps = 36/260 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  +     +  A++ F   L++ P    AL GRG +R    + + +++DF+ AI+  
Sbjct: 168 ARGNCKNGLNDFRGALADFGLALEKSPNKTTALSGRGYSRFKLEDYKGSLADFSRAIELA 227

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  + + +RG  +  +GE   A+ D +K LE  PN       RG    +  +   A+ D
Sbjct: 228 PTDADLFYKRGLVKTRMGEFDNAVVDYNKTLELNPNHYKAYFSRGFCRSRTGNAKVALGD 287

Query: 506 LSACVKLDK------------------------------------ENKSAYTYLGLALSS 529
           L   +++D                                     +   AY   G+  ++
Sbjct: 288 LDKSIEMDNRSIQTKAYYSEFITQNMLPLFATVVQERYKVAELGDDRADAYIVRGMLKNA 347

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
            G+ K A     +A++L+    E++         L + + A+      + ++ R ++AY+
Sbjct: 348 NGDSKPALLDLNRAVELNPTSAESYFIRGIIRSSLGDQKGAMIDCNSTVRLNPRHAEAYY 407

Query: 590 LRGLLLHGLGQHKKAIKDLS 609
           LRGL+ +  G       DLS
Sbjct: 408 LRGLIRYDTGDEVSGCADLS 427



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 79/188 (42%), Gaps = 36/188 (19%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            D    RG+ +   G++ +A+  +++ L+ +P + +A   RG  R+     + A+ D  +
Sbjct: 231 ADLFYKRGLVKTRMGEFDNAVVDYNKTLELNPNHYKAYFSRGFCRSRTGNAKVALGDLDK 290

Query: 441 AIQSNPSA------------------------------------GEAWKRRGQARAALGE 464
           +I+ +  +                                     +A+  RG  + A G+
Sbjct: 291 SIEMDNRSIQTKAYYSEFITQNMLPLFATVVQERYKVAELGDDRADAYIVRGMLKNANGD 350

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
           S  A+ DL++A+E  P SA+    RGI+     D   A+ D ++ V+L+  +  AY   G
Sbjct: 351 SKPALLDLNRAVELNPTSAESYFIRGIIRSSLGDQKGAMIDCNSTVRLNPRHAEAYYLRG 410

Query: 525 LALSSIGE 532
           L     G+
Sbjct: 411 LIRYDTGD 418



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 21/171 (12%)

Query: 366 KKFCVTRISKSK--------SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE- 416
           + FC +R   +K        SI +D R  +  A  +E    + + +F  +++E     E 
Sbjct: 271 RGFCRSRTGNAKVALGDLDKSIEMDNRSIQTKAYYSEFITQNMLPLFATVVQERYKVAEL 330

Query: 417 ------ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
                 A I RG  +    + + A+ D   A++ NP++ E++  RG  R++LG+   A+ 
Sbjct: 331 GDDRADAYIVRGMLKNANGDSKPALLDLNRAVELNPTSAESYFIRGIIRSSLGDQKGAMI 390

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           D +  +   P  A+  + RG++ +   D      ++S C  L +  +  Y 
Sbjct: 391 DCNSTVRLNPRHAEAYYLRGLIRYDTGD------EVSGCADLSRSGELGYV 435


>gi|452210866|ref|YP_007490980.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
 gi|452100768|gb|AGF97708.1| GTP cyclohydrolase III (methanopterin) [Methanosarcina mazei Tuc01]
          Length = 398

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 114/227 (50%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A+  +D +LKE+  Y EA  G+G A       + AI  + +A++ +P   EAW  
Sbjct: 167 GRYEEAVDAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYY 226

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G    +LG   +A++   KA+E +P + D  +  GI     + ++ A+      ++++ 
Sbjct: 227 KGVDLDSLGSFKQALKAYEKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINS 286

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           EN   +   G  LS +  + +A EA+ KA+QLD  +LEA+  L      L   E+AL+  
Sbjct: 287 ENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIY 346

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           ++ L +D   + ++  + + L  LG+ ++A       + IDP   E 
Sbjct: 347 EKALKLDPEAADSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEI 393



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 145/304 (47%), Gaps = 8/304 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+  +  GKY  AI  F++ + +DP     L  +  A       E A+  + EA++ N  
Sbjct: 58  GLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVKINSE 117

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             + W     + + +GE  +A++   KAL+ +P+  +  + + +   +   +  AV+   
Sbjct: 118 DADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYD 177

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +K +   K A+   G+AL  +G Y +A  A+ KA+++D  FLEAW +       L + 
Sbjct: 178 IVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSF 237

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++AL+  ++ + ID     A++  G+ L  L ++ +AI      + I+  N +  Y +  
Sbjct: 238 KQALKAYEKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGF 297

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEK-----FVLQCLAFYQKEIALYT-ASKINSEFC 681
               +  + EA++ Y  A+ L+ + +E      FVL  L  +++ + +Y  A K++ E  
Sbjct: 298 TLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAA 357

Query: 682 --WF 683
             WF
Sbjct: 358 DSWF 361



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 119/255 (46%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A+  + + L   P YP A  G+    +     E A+  +   ++ N +  EAW  
Sbjct: 133 GEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDAYDIVLKENSNYKEAWAG 192

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   +G   EAI    KALE +P   +  + +G+       F  A++     V++D 
Sbjct: 193 KGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEIDP 252

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           EN  A+  +G+ L ++  Y +A  A  KAI+++    + W +       +   ++A+E  
Sbjct: 253 ENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAY 312

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++ + +D  + +AY   G +L  L + ++A+      L +DP   +  + +A C   +G 
Sbjct: 313 RKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAVCLSYLGR 372

Query: 635 YREAIKDYDAALDLE 649
             EA   Y  A++++
Sbjct: 373 EEEAEDAYRKAVEID 387



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 98/201 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +GIA    G Y  AI  +D+ L+ DP + EA   +G         + A+  + +A++ +
Sbjct: 192 GKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVEID 251

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW   G     L    EAI    KA+E    ++D+ + +G    + + F+ AVE 
Sbjct: 252 PENDDAWNNMGIDLENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEA 311

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               V+LD E   AY+ LG  L+ +  +++A + + KA++LD    ++W         L 
Sbjct: 312 YRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKALKLDPEAADSWFGKAVCLSYLG 371

Query: 566 NSEKALECLQQVLYIDKRFSK 586
             E+A +  ++ + ID R+++
Sbjct: 372 REEEAEDAYRKAVEIDPRYAE 392



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/234 (21%), Positives = 101/234 (43%), Gaps = 40/234 (17%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L+E G+   +   +N A+      +  D  N         AL S+G +++A + + +A++
Sbjct: 54  LNECGLDLLRLGKYNEAIIAFEKAIDKDPGNIYLLNNKAAALESLGRFEEALKLYQEAVK 113

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVL-----YIDKRFSKAYHL---------- 590
           ++    + W ++   Y  +   EKA+E   + L     Y +  + KA +L          
Sbjct: 114 INSEDADLWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAV 173

Query: 591 -------------------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
                              +G+ L  +G + +AI      L IDP  +E  Y +     +
Sbjct: 174 DAYDIVLKENSNYKEAWAGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDS 233

Query: 632 IGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEI-ALYTASKINSE 679
           +G +++A+K Y+ A++++ ++ + +      L+ L  Y + I A   A +INSE
Sbjct: 234 LGSFKQALKAYEKAVEIDPENDDAWNNMGIDLENLERYDEAINAFEKAIEINSE 287



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L +L  + +AI   +  +  + E  D+  N+ F  SQ++     +    KA+QLDP  L+
Sbjct: 265 LENLERYDEAINAFEKAIEINSENSDVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLE 324

Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
           AY   G   + L R EEAL ++EK
Sbjct: 325 AYSSLGFVLAQLKRFEEALDIYEK 348



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
           RL K ++ I   ++ +  D      +  +   A L SL  + +A+++    +  + E  D
Sbjct: 63  RLGKYNEAIIAFEKAIDKDPGNIYLLNNKA--AALESLGRFEEALKLYQEAVKINSEDAD 120

Query: 72  ICNR-AFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
           + N  AF YSQ+  ++  +    KAL L P    A+  K    S  GR EEA+      Y
Sbjct: 121 LWNNMAFSYSQIGEYEKAVEAYGKALDLKPDYPNAWYGKALNLSQAGRYEEAVDA----Y 176

Query: 131 EHALHQSADLKQ 142
           +  L ++++ K+
Sbjct: 177 DIVLKENSNYKE 188



 Score = 40.4 bits (93), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 49/104 (47%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   ++G       ++  A+  + + ++ DP Y EA    G   A  +  E A+  + +A
Sbjct: 290 DVWYNKGFTLSQVQRFDEAVEAYRKAVQLDPEYLEAYSSLGFVLAQLKRFEEALDIYEKA 349

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           ++ +P A ++W  +    + LG   EA     KA+E +P  A+I
Sbjct: 350 LKLDPEAADSWFGKAVCLSYLGREEEAEDAYRKAVEIDPRYAEI 393



 Score = 40.0 bits (92), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 30/59 (50%)

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
             +     Q+  +   I   DKAL++DP  L+A+  KG    +LG  ++AL  +EK  E
Sbjct: 191 AGKGIALGQMGNYDEAIIAYDKALEIDPEFLEAWYYKGVDLDSLGSFKQALKAYEKAVE 249


>gi|427419274|ref|ZP_18909457.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
 gi|425761987|gb|EKV02840.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
          Length = 510

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 9/291 (3%)

Query: 365 NKKFCVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N +  +   + + ++  DF    L RG A        +A+  ++Q +  D  Y  A + R
Sbjct: 102 NDEAAIEEFNAAINLKPDFAPSYLFRGAAFARLENTEAALDNYNQAISIDANYSTAYLNR 161

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G         + A +DF   I ++P +  A+   G   +  G    A++ L+ A++ +P+
Sbjct: 162 GILYYDLGRTDLATTDFERTIATDPESANAYIYLGLIASEQGNQQIALEYLNDAVQLDPS 221

Query: 482 SADILHERGIVNFKFKDFNA---AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           +A     RG+V   FK  N+   A+ D +  ++LD +N + +   G    ++G+ ++A +
Sbjct: 222 NASAYFHRGLV---FKALNSPASAISDFTQSIELDDDNAATFINRGATYYTVGDTREALQ 278

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
              +AI +D N +EA+ + +      A  + A+  L QVL ++   + AY +RG +    
Sbjct: 279 DFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGNADAYLVRGQVFASS 338

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
                AI D S  L + P + E  Y R + Y   GE + AI DY AAL L+
Sbjct: 339 SNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAISDYTAALALD 389



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 139/296 (46%), Gaps = 5/296 (1%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R + G+ +  +G   +AI  F+  +   P +  + + RG A A     EAA+ ++ +AI 
Sbjct: 90  RFNEGLEEYQDGNDEAAIEEFNAAINLKPDFAPSYLFRGAAFARLENTEAALDNYNQAIS 149

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            + +   A+  RG     LG +  A  D  + +  +P SA+     G++  +  +   A+
Sbjct: 150 IDANYSTAYLNRGILYYDLGRTDLATTDFERTIATDPESANAYIYLGLIASEQGNQQIAL 209

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           E L+  V+LD  N SAY + GL   ++     A     ++I+LD +    + +    Y  
Sbjct: 210 EYLNDAVQLDPSNASAYFHRGLVFKALNSPASAISDFTQSIELDDDNAATFINRGATYYT 269

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + ++ +AL+   + + ID+   +AY+ R   L    + + AI DL+  L ++P N +   
Sbjct: 270 VGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGNADAYL 329

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY-----QKEIALYTAS 674
           +R   + +     +AI D+   L+L  DS E +  +  A+      Q  I+ YTA+
Sbjct: 330 VRGQVFASSSNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAISDYTAA 385



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 5/278 (1%)

Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +++IS+D       L+RGI   + G+   A + F++ +  DP    A I  G   + Q  
Sbjct: 145 NQAISIDANYSTAYLNRGILYYDLGRTDLATTDFERTIATDPESANAYIYLGLIASEQGN 204

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + A+    +A+Q +PS   A+  RG    AL     AI D ++++E + ++A     RG
Sbjct: 205 QQIALEYLNDAVQLDPSNASAYFHRGLVFKALNSPASAISDFTQSIELDDDNAATFINRG 264

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
              +   D   A++D +  + +D+ N  AY     AL S    + A     + + L+   
Sbjct: 265 ATYYTVGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGN 324

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            +A+    Q +   +N+  A+    +VL +    ++AY+ RG      G+ + AI D ++
Sbjct: 325 ADAYLVRGQVFASSSNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAISDYTA 384

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            L +DP +      R   +  +G+   A+ DY  A++L
Sbjct: 385 ALALDPEHAPSYKYRGDAFADLGDSFSALSDYSTAINL 422



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 104/224 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG      G    A+  F++ +  D    EA   R  A   +   +AAI+D  + +  
Sbjct: 261 INRGATYYTVGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLNQVLTL 320

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   +A+  RGQ  A+   + +AI D SK LE  P+SA+  + RG    +  +  AA+ 
Sbjct: 321 EPGNADAYLVRGQVFASSSNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAIS 380

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +A + LD E+  +Y Y G A + +G+   A   +  AI L+  +  A+    + + + 
Sbjct: 381 DYTAALALDPEHAPSYKYRGDAFADLGDSFSALSDYSTAINLNSAYWNAYASRGRMHYES 440

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            + + A      V+  +   +  ++ RG+    +G  + A+ DL
Sbjct: 441 GDYQSAYTDFSAVITANVLDADVFYYRGITNARMGNRRAAVTDL 484



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 4/268 (1%)

Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
           ASAIS F Q ++ D       I RG       +   A+ DF EAI  + +  EA+  R  
Sbjct: 240 ASAISDFTQSIELDDDNAATFINRGATYYTVGDTREALQDFNEAIDIDENNVEAYYNRSF 299

Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
           A  +      AI DL++ L  EP +AD    RG V     +   A+ D S  ++L  ++ 
Sbjct: 300 ALISEARPQAAIADLNQVLTLEPGNADAYLVRGQVFASSSNTADAINDFSKVLELSPDSA 359

Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
            AY   G A    GE + A   +  A+ LD     ++ +    + DL +S  AL      
Sbjct: 360 EAYYRRGNAYLEAGEQQAAISDYTAALALDPEHAPSYKYRGDAFADLGDSFSALSDYSTA 419

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
           + ++  +  AY  RG + +  G ++ A  D S+ +  +  + +  Y R      +G  R 
Sbjct: 420 INLNSAYWNAYASRGRMHYESGDYQSAYTDFSAVITANVLDADVFYYRGITNARMGNRRA 479

Query: 638 AIKDYDAALDLELDSME----KFVLQCL 661
           A+ D + A  L L + E    + VL  L
Sbjct: 480 AVTDLEKAGSLYLTNNEANRYRLVLDAL 507



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 115/281 (40%), Gaps = 7/281 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+    +G    A+   +  ++ DP    A   RG          +AISDFT++I+ +  
Sbjct: 196 GLIASEQGNQQIALEYLNDAVQLDPSNASAYFHRGLVFKALNSPASAISDFTQSIELDDD 255

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
               +  RG     +G++ EA+QD ++A++ + N+ +  + R           AA+ DL+
Sbjct: 256 NAATFINRGATYYTVGDTREALQDFNEAIDIDENNVEAYYNRSFALISEARPQAAIADLN 315

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + L+  N  AY   G   +S      A     K ++L  +  EA+      Y +    
Sbjct: 316 QVLTLEPGNADAYLVRGQVFASSSNTADAINDFSKVLELSPDSAEAYYRRGNAYLEAGEQ 375

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           + A+      L +D   + +Y  RG     LG    A+ D S+ + ++ +       R  
Sbjct: 376 QAAISDYTAALALDPEHAPSYKYRGDAFADLGDSFSALSDYSTAINLNSAYWNAYASRGR 435

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
            ++  G+Y+ A  D+ A +          VL    FY + I
Sbjct: 436 MHYESGDYQSAYTDFSAVITAN-------VLDADVFYYRGI 469



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 13/195 (6%)

Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAI 401
           + E + EA  N+ F +   ++ ++   D               L RG    +    A AI
Sbjct: 286 IDENNVEAYYNRSFALISEARPQAAIADLNQVLTLEPGNADAYLVRGQVFASSSNTADAI 345

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           + F ++L+  P   EA   RG A     E +AAISD+T A+  +P    ++K RG A A 
Sbjct: 346 NDFSKVLELSPDSAEAYYRRGNAYLEAGEQQAAISDYTAALALDPEHAPSYKYRGDAFAD 405

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           LG+S  A+ D S A+       +    RG ++++  D+ +A  D SA +  +  +   + 
Sbjct: 406 LGDSFSALSDYSTAINLNSAYWNAYASRGRMHYESGDYQSAYTDFSAVITANVLDADVFY 465

Query: 522 YLGLALSSIGEYKKA 536
           Y G+  + +G  + A
Sbjct: 466 YRGITNARMGNRRAA 480


>gi|334118012|ref|ZP_08492102.1| serine/threonine protein kinase with TPR repeats [Microcoleus
           vaginatus FGP-2]
 gi|333459997|gb|EGK88607.1| serine/threonine protein kinase with TPR repeats [Microcoleus
           vaginatus FGP-2]
          Length = 699

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 124/252 (49%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI+ FD  LK  P Y  A  GRG      +  E AI+ + +A++   +   AW  RGQA 
Sbjct: 421 AIASFDNALKIQPDYATAWEGRGDVLLDSQRYEEAIASYEKAVEFQSNLYRAWYNRGQAY 480

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             L +   A++   KA+E + ++ +  +  G V  +      A E     V+   +   +
Sbjct: 481 QKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLEVNKNQEAFEAYEKAVRFQPKFYQS 540

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +   G+AL  +  +++A EA+ KA++L  ++ +AW +L   Y +L   E+A+EC  + L 
Sbjct: 541 WYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALD 600

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           ++ +  +A++ RG   + L +++ AI   +  + +     E  Y R +   AI  Y +AI
Sbjct: 601 LNPKEDQAWYNRGNAQYNLKRYEDAIASYNEAVYVKQDYSEAWYSRGNALVAIKRYEDAI 660

Query: 640 KDYDAALDLELD 651
             YD A+  + D
Sbjct: 661 ASYDKAIRYKPD 672



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 127/263 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    N  ++  A++ +++ +   P Y E    +       ++   + S + +AI+  
Sbjct: 339 NRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYHESQSAYDKAIELK 398

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   L +S EAI     AL+ +P+ A     RG V    + +  A+  
Sbjct: 399 PEYLEAWTGRGYALDKLQQSQEAIASFDNALKIQPDYATAWEGRGDVLLDSQRYEEAIAS 458

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               V+       A+   G A   + +Y +A E++ KA+++  +  EAW +L   + ++ 
Sbjct: 459 YEKAVEFQSNLYRAWYNRGQAYQKLKQYDRAVESYQKAVEIKFDNYEAWYNLGNVFLEVN 518

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +++A E  ++ +    +F ++++ +G+ L  + +H++A++     + + P   +  Y  
Sbjct: 519 KNQEAFEAYEKAVRFQPKFYQSWYSKGIALLKMRRHEEAVEAYEKAVKLKPDYYQAWYNL 578

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
              YH + +Y +AI+ Y+ ALDL
Sbjct: 579 GWSYHELRKYEQAIECYNRALDL 601



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 76/177 (42%)

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
           F   +A  L+ RG   +    F  A+      + L  +    +      L  + +Y +++
Sbjct: 329 FNSANATDLYNRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLYKLKKYHESQ 388

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
            A+ KAI+L   +LEAW         L  S++A+      L I   ++ A+  RG +L  
Sbjct: 389 SAYDKAIELKPEYLEAWTGRGYALDKLQQSQEAIASFDNALKIQPDYATAWEGRGDVLLD 448

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
             ++++AI      +    +     Y R   Y  + +Y  A++ Y  A++++ D+ E
Sbjct: 449 SQRYEEAIASYEKAVEFQSNLYRAWYNRGQAYQKLKQYDRAVESYQKAVEIKFDNYE 505



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 2/171 (1%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + L     +VN+ +   A   +++ ++  P + ++   +G A    R  E A+  + +A+
Sbjct: 508 YNLGNVFLEVNKNQ--EAFEAYEKAVRFQPKFYQSWYSKGIALLKMRRHEEAVEAYEKAV 565

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +  P   +AW   G +   L +  +AI+  ++AL+  P      + RG   +  K +  A
Sbjct: 566 KLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALDLNPKEDQAWYNRGNAQYNLKRYEDA 625

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           +   +  V + ++   A+   G AL +I  Y+ A  ++ KAI+   ++  A
Sbjct: 626 IASYNEAVYVKQDYSEAWYSRGNALVAIKRYEDAIASYDKAIRYKPDYRAA 676


>gi|323137815|ref|ZP_08072890.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
 gi|322396818|gb|EFX99344.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. ATCC 49242]
          Length = 290

 Score =  100 bits (249), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 69/227 (30%), Positives = 106/227 (46%)

Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMY 414
           + +T ++A       +T + +    S +   +RG+A    G++  AI+ F Q +K DP  
Sbjct: 52  IADTDSKAAAANIDSLTEVIRRNPSSAEAYNTRGVAYARVGRFNEAIADFTQAIKLDPNS 111

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
             A   R  A+    + EAA +DF  AIQ NP+   A+  R     A G   +A+ DL  
Sbjct: 112 AAAYTNRALAQRQIGQNEAARNDFDHAIQVNPNHAPAYVGRANLLRAQGNLDQALSDLDT 171

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A+   P SA   H RG+++ K  D   AV D    +  D    + Y   G +L ++G+Y 
Sbjct: 172 AIRLNPESAQAFHARGLIHQKRGDNARAVTDFDNAIDRDPFAAAPYQARGESLVALGKYD 231

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
           KA E    A+ +D     AW  L   Y+   N +KA E  Q+ L +D
Sbjct: 232 KAVEDFNAALNVDNKSALAWAWLGLAYEKNGNRQKAQESYQRALQLD 278



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 37/247 (14%)

Query: 420 GRGTARAFQRELEAA---ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           GRG A     + +AA   I   TE I+ NPS+ EA+  RG A A +G   EAI D ++A+
Sbjct: 46  GRGIAEIADTDSKAAAANIDSLTEVIRRNPSSAEAYNTRGVAYARVGRFNEAIADFTQAI 105

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           + +PNSA                                  +AYT   LA   IG+ + A
Sbjct: 106 KLDPNSA----------------------------------AAYTNRALAQRQIGQNEAA 131

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
                 AIQ++ N   A+       +   N ++AL  L   + ++   ++A+H RGL+  
Sbjct: 132 RNDFDHAIQVNPNHAPAYVGRANLLRAQGNLDQALSDLDTAIRLNPESAQAFHARGLIHQ 191

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             G + +A+ D  + +  DP        R     A+G+Y +A++D++AAL+++  S   +
Sbjct: 192 KRGDNARAVTDFDNAIDRDPFAAAPYQARGESLVALGKYDKAVEDFNAALNVDNKSALAW 251

Query: 657 VLQCLAF 663
               LA+
Sbjct: 252 AWLGLAY 258



 Score = 42.0 bits (97), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 41/95 (43%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+     G  A A++ FD  +  DP        RG +     + + A+ DF  A+  +
Sbjct: 185 ARGLIHQKRGDNARAVTDFDNAIDRDPFAAAPYQARGESLVALGKYDKAVEDFNAALNVD 244

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
             +  AW   G A    G   +A +   +AL+ +P
Sbjct: 245 NKSALAWAWLGLAYEKNGNRQKAQESYQRALQLDP 279


>gi|449130251|ref|ZP_21766472.1| hypothetical protein HMPREF9724_01137 [Treponema denticola SP37]
 gi|448943090|gb|EMB23983.1| hypothetical protein HMPREF9724_01137 [Treponema denticola SP37]
          Length = 338

 Score =  100 bits (249), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 65/254 (25%), Positives = 124/254 (48%), Gaps = 1/254 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  + + ++ DP Y EA + RG    +  E E A++DF   I+ +P + +A+  +G   
Sbjct: 59  AIYYYTKAIEADPAYIEAYLNRGEMYYYVDENEKALADFDRVIELSPQSDKAYYFKGLLF 118

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G    AI++L+ A+       +    R  +    K ++ A+++++A +KL+ ++   
Sbjct: 119 NDTGNYNNAIENLNTAISLNDKDYEYYEARSKIYGYLKTYDKALDNINAAIKLNPKSAKL 178

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G           A      AI+LD N +  +  L   Y +     +A E + +++ 
Sbjct: 179 YNLRGRLHEHFKRTDDAVNDFKIAIKLDPNDIWPYNGLLYIYIETKKHNEAFEIVNKMIK 238

Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
           +   +    Y +RGLL    GQ+K+A++D ++G+ I P N     +R   Y  + EY++A
Sbjct: 239 MKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRIYPQNASLYNIRGKIYFDLKEYKKA 298

Query: 639 IKDYDAALDLELDS 652
           I+D+D A+   L++
Sbjct: 299 IEDFDMAIKFALEN 312



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 79/149 (53%), Gaps = 3/149 (2%)

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           K+N S   Y  +A ++  E K    A   + KAI+ D  ++EA+ +  + Y  +  +EKA
Sbjct: 34  KQNYSQAEYFNIAGNTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVDENEKA 93

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           L    +V+ +  +  KAY+ +GLL +  G +  AI++L++ + ++  + E    R+  Y 
Sbjct: 94  LADFDRVIELSPQSDKAYYFKGLLFNDTGNYNNAIENLNTAISLNDKDYEYYEARSKIYG 153

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQ 659
            +  Y +A+ + +AA+ L   S + + L+
Sbjct: 154 YLKTYDKALDNINAAIKLNPKSAKLYNLR 182



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 79/177 (44%)

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + N S  E +   G       +   AI   +KA+E +P   +    RG + +   +   A
Sbjct: 34  KQNYSQAEYFNIAGNTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVDENEKA 93

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D    ++L  ++  AY + GL  +  G Y  A E    AI L+    E +   ++ Y 
Sbjct: 94  LADFDRVIELSPQSDKAYYFKGLLFNDTGNYNNAIENLNTAISLNDKDYEYYEARSKIYG 153

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            L   +KAL+ +   + ++ + +K Y+LRG L     +   A+ D    + +DP++I
Sbjct: 154 YLKTYDKALDNINAAIKLNPKSAKLYNLRGRLHEHFKRTDDAVNDFKIAIKLDPNDI 210



 Score = 44.7 bits (104), Expect = 0.27,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 81/189 (42%), Gaps = 5/189 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+   + G Y +AI   +  +  +    E    R     + +  + A+ +   AI+ NP
Sbjct: 114 KGLLFNDTGNYNNAIENLNTAISLNDKDYEYYEARSKIYGYLKTYDKALDNINAAIKLNP 173

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI--VNFKFKDFNAAVE 504
            + + +  RG+       + +A+ D   A++ +PN  DI    G+  +  + K  N A E
Sbjct: 174 KSAKLYNLRGRLHEHFKRTDDAVNDFKIAIKLDPN--DIWPYNGLLYIYIETKKHNEAFE 231

Query: 505 DLSACVKLDKENKSA-YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            ++  +K+        Y   GL  S  G+YK+A E     I++       +    + Y D
Sbjct: 232 IVNKMIKMKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRIYPQNASLYNIRGKIYFD 291

Query: 564 LANSEKALE 572
           L   +KA+E
Sbjct: 292 LKEYKKAIE 300


>gi|359460420|ref|ZP_09248983.1| hypothetical protein ACCM5_16963 [Acaryochloris sp. CCMEE 5410]
          Length = 266

 Score =  100 bits (249), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 102/193 (52%), Gaps = 1/193 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +G AQ  +G Y  AI+ ++Q L+ +P + E  + RG A    +  + AI+DF +A+  
Sbjct: 41  LEKGQAQAKQGNYQGAIATYNQALQANPRFTEVYLARGLAYHDLQNYQQAIADFNQALNI 100

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-NFKFKDFNAAV 503
            P        RG+ R+ +G+   A+ DL++A+E +PN A+  + R I+ + +  +   A+
Sbjct: 101 EPQNAVVLYNRGETRSDVGDLDGAMSDLNQAIEVDPNYAEAFNLRAILYSTRLGNLKLAL 160

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           +DL   +KL     +AY   G  L+++G+   A   + +AI +D    EA+GH       
Sbjct: 161 DDLQHAIKLQPNYANAYYNRGNILTAMGDIDGAITDYTQAINIDAKLAEAYGHRGLLLAR 220

Query: 564 LANSEKALECLQQ 576
             +++  L+ LQ+
Sbjct: 221 KGDTQAGLKDLQK 233



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 6/209 (2%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L+ +G A+A Q   + AI+ + +A+Q+NP   E +  RG A   L    +AI D ++AL 
Sbjct: 40  LLEKGQAQAKQGNYQGAIATYNQALQANPRFTEVYLARGLAYHDLQNYQQAIADFNQALN 99

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS-IGEYKKA 536
            EP +A +L+ RG       D + A+ DL+  +++D     A+    +  S+ +G  K A
Sbjct: 100 IEPQNAVVLYNRGETRSDVGDLDGAMSDLNQAIEVDPNYAEAFNLRAILYSTRLGNLKLA 159

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
            +    AI+L  N+  A+ +       + + + A+    Q + ID + ++AY  RGLLL 
Sbjct: 160 LDDLQHAIKLQPNYANAYYNRGNILTAMGDIDGAITDYTQAINIDAKLAEAYGHRGLLLA 219

Query: 597 GLGQHKKAIKDLSSGLGI-----DPSNIE 620
             G  +  +KDL     +     DP N +
Sbjct: 220 RKGDTQAGLKDLQKAADLFQELGDPENYQ 248



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 88/203 (43%), Gaps = 35/203 (17%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +GQA+A  G    AI   ++AL+  P   ++   RG+     +++  A+ D +  + ++ 
Sbjct: 43  KGQAQAKQGNYQGAIATYNQALQANPRFTEVYLARGLAYHDLQNYQQAIADFNQALNIEP 102

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +N        + L + GE +                            D+ + + A+  L
Sbjct: 103 QN-------AVVLYNRGETR---------------------------SDVGDLDGAMSDL 128

Query: 575 QQVLYIDKRFSKAYHLRGLLLHG-LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
            Q + +D  +++A++LR +L    LG  K A+ DL   + + P+     Y R +   A+G
Sbjct: 129 NQAIEVDPNYAEAFNLRAILYSTRLGNLKLALDDLQHAIKLQPNYANAYYNRGNILTAMG 188

Query: 634 EYREAIKDYDAALDLELDSMEKF 656
           +   AI DY  A++++    E +
Sbjct: 189 DIDGAITDYTQAINIDAKLAEAY 211



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 51/99 (51%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N + A+    Q L  + RF++ Y  RGL  H L  +++AI D +  L I+P N   LY 
Sbjct: 51  GNYQGAIATYNQALQANPRFTEVYLARGLAYHDLQNYQQAIADFNQALNIEPQNAVVLYN 110

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           R      +G+   A+ D + A++++ +  E F L+ + +
Sbjct: 111 RGETRSDVGDLDGAMSDLNQAIEVDPNYAEAFNLRAILY 149



 Score = 45.1 bits (105), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 13/121 (10%)

Query: 376 SKSISVD------FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           +++I VD      F L   +     G    A+      +K  P Y  A   RG       
Sbjct: 129 NQAIEVDPNYAEAFNLRAILYSTRLGNLKLALDDLQHAIKLQPNYANAYYNRGNILTAMG 188

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +++ AI+D+T+AI  +    EA+  RG   A  G++   ++DL KA       AD+  E 
Sbjct: 189 DIDGAITDYTQAINIDAKLAEAYGHRGLLLARKGDTQAGLKDLQKA-------ADLFQEL 241

Query: 490 G 490
           G
Sbjct: 242 G 242


>gi|296127458|ref|YP_003634710.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019274|gb|ADG72511.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 687

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 157/321 (48%), Gaps = 16/321 (4%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G ++ N   Y  AI  F++ L+ D  + +    RG A    +  E A+SDFT+A++ NP+
Sbjct: 71  GASKHNLKNYNEAIEYFNKTLELDSSFFDVYYSRGVAEYHLKFYENAVSDFTKALEVNPN 130

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFKFKDFNAAVEDL 506
              A+  R    A + +  +AI+D    L  F+  +    + RG+  F    F  AV+D 
Sbjct: 131 LQNAYYIRALCYAKINKHKKAIEDFDTLLNSFDEINYIYYYYRGLSKFHLNLFEEAVKDF 190

Query: 507 S-ACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
             A   L  E    Y Y    L+ S +  + K+   + KAI++++N ++A+ +    Y +
Sbjct: 191 DIAAYYLPNE---GYIYYDRALSYSKLNMFDKSIRDYTKAIEINKNEIDAYYNRASSYCE 247

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           +    KA+E   +V+ ++    +AY+ R L    +  + KAI+D    + ++ ++ E +Y
Sbjct: 248 IEEYYKAIEDYNKVIELNPDDDEAYYNRALTYSKIEAYDKAIEDYDKVIELNHNDKEAVY 307

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWF 683
            RA C  ++  + EAIKD++A ++   D++  FV   L     E+  Y  S  N     F
Sbjct: 308 NRALCKQSVNLFEEAIKDFNAIIN--YDNI--FVYYNLGICYLELERYEESVNN-----F 358

Query: 684 DIDGDIDPLFKEYWCKRLHPK 704
           D+  +++P F + +  R + K
Sbjct: 359 DLFIEVNPDFADAYYYRGNAK 379



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 135/280 (48%), Gaps = 10/280 (3%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFD----QILKEDPMYPEALIGRGTARA 426
           T ++    I+  +   RG+++ +   +  A+  FD     +  E  +Y +  +       
Sbjct: 157 TLLNSFDEINYIYYYYRGLSKFHLNLFEEAVKDFDIAAYYLPNEGYIYYDRALSYSKLNM 216

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           F +    +I D+T+AI+ N +  +A+  R  +   + E  +AI+D +K +E  P+  +  
Sbjct: 217 FDK----SIRDYTKAIEINKNEIDAYYNRASSYCEIEEYYKAIEDYNKVIELNPDDDEAY 272

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + R +   K + ++ A+ED    ++L+  +K A     L   S+  +++A +     I  
Sbjct: 273 YNRALTYSKIEAYDKAIEDYDKVIELNHNDKEAVYNRALCKQSVNLFEEAIKDFNAIINY 332

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           D  F+  + +L   Y +L   E+++      + ++  F+ AY+ RG   +GLG + ++I+
Sbjct: 333 DNIFV--YYNLGICYLELERYEESVNNFDLFIEVNPDFADAYYYRGNAKYGLGYYDESIE 390

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           D +  L +D   I+  Y RA     +  Y EA+KD+D AL
Sbjct: 391 DYNKTLELDNVYIDAYYERAKVKIELSMYDEAMKDFDEAL 430



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 10/223 (4%)

Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
           E Y+K+   DN   D+   R+K+  +  M     +EA ++    +  I      +  + L
Sbjct: 390 EDYNKTLELDNVYIDAYYERAKVKIELSMY----DEAMKDFDEALFYIESDSDRAYLYTL 445

Query: 386 SRGIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
              + ++++ KY  AI  +   ++  +  Y +  I +  A      ++ A++D+ +AI+ 
Sbjct: 446 KATLNEISK-KYDDAIENYTNAIELGNECYYKMAIAKHNAGL----IKDALNDYNKAIEL 500

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   E +  RG A   L    EAI+D +KA+E  PN  +  + RGI N   K+++ A  
Sbjct: 501 EPYNYEIYGYRGNAELDLYLYKEAIEDFNKAIELNPNYDEAYYNRGIANEALKNYDEAFR 560

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           D    VKL+ ++  A+  LG     + EY KA E   KA++++
Sbjct: 561 DYETTVKLNHKHDYAFNNLGSCYVKLKEYDKALENFYKALEIN 603



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 127/257 (49%), Gaps = 8/257 (3%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI  ++++++ +P   EA   R    +     + AI D+ + I+ N +  EA   R
Sbjct: 250 EYYKAIEDYNKVIELNPDDDEAYYNRALTYSKIEAYDKAIEDYDKVIELNHNDKEAVYNR 309

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
              + ++    EAI+D +  + ++  +  + +  GI   + + +  +V +    ++++ +
Sbjct: 310 ALCKQSVNLFEEAIKDFNAIINYD--NIFVYYNLGICYLELERYEESVNNFDLFIEVNPD 367

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY Y G A   +G Y ++ E + K ++LD  +++A+    +   +L+  ++A++   
Sbjct: 368 FADAYYYRGNAKYGLGYYDESIEDYNKTLELDNVYIDAYYERAKVKIELSMYDEAMKDFD 427

Query: 576 QVL-YIDKRFSKA--YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
           + L YI+    +A  Y L+  L     ++  AI++ ++ + +     EC Y  A   H  
Sbjct: 428 EALFYIESDSDRAYLYTLKATLNEISKKYDDAIENYTNAIELGN---ECYYKMAIAKHNA 484

Query: 633 GEYREAIKDYDAALDLE 649
           G  ++A+ DY+ A++LE
Sbjct: 485 GLIKDALNDYNKAIELE 501



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 10/209 (4%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQIL-----KEDPMYPEALIGRGTARAFQRELE 432
           ++ +D    R   ++    Y  A+  FD+ L       D  Y   L  + T     ++ +
Sbjct: 400 NVYIDAYYERAKVKIELSMYDEAMKDFDEALFYIESDSDRAYLYTL--KATLNEISKKYD 457

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI ++T AI+      E + +   A+   G   +A+ D +KA+E EP + +I   RG  
Sbjct: 458 DAIENYTNAIEL---GNECYYKMAIAKHNAGLIKDALNDYNKAIELEPYNYEIYGYRGNA 514

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
                 +  A+ED +  ++L+     AY   G+A  ++  Y +A   +   ++L+     
Sbjct: 515 ELDLYLYKEAIEDFNKAIELNPNYDEAYYNRGIANEALKNYDEAFRDYETTVKLNHKHDY 574

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYID 581
           A+ +L   Y  L   +KALE   + L I+
Sbjct: 575 AFNNLGSCYVKLKEYDKALENFYKALEIN 603


>gi|428213339|ref|YP_007086483.1| hypothetical protein Oscil6304_2964 [Oscillatoria acuminata PCC
           6304]
 gi|428001720|gb|AFY82563.1| TPR repeat-containing protein [Oscillatoria acuminata PCC 6304]
          Length = 580

 Score =  100 bits (249), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 9/257 (3%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           +AI  FD+ ++  P +PEA + RG A +   + E A+S F +A + NP+   AW  RG A
Sbjct: 297 AAIGCFDKAIELHPNWPEAWMNRGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMA 356

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
              LG   +AIQ LS A++ +PN  +  + RG+   + + +  A+      V++ +E   
Sbjct: 357 LYGLGRYKDAIQALSNAIQIQPNFPEAWYHRGLALEQLQRYEEALTAYEKVVQVTQEPMF 416

Query: 519 AY---TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALE 572
            Y         L  +  Y +A +A  K +++  N  +AW   G L    Q   +   A+ 
Sbjct: 417 RYRSWVKRSEVLEKLERYPEALDAFAKVLEVKPNDAQAWMKRGDLLSLAQRYID---AIV 473

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              Q + I       +  RG +L  +GQ+ +AI    + + + P++      R  C   +
Sbjct: 474 AYDQAIAIWPNHYDPWMKRGRVLSKIGQYPQAIAAYDTVIQMKPTHSPAWLRRGECLEKL 533

Query: 633 GEYREAIKDYDAALDLE 649
             Y EA + Y  AL+++
Sbjct: 534 HRYPEAARSYGVALEVD 550



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 149/341 (43%), Gaps = 30/341 (8%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQ 443
            ++G+A   + +YA A++ +D+ L+  P    +   RG T    QR  + A++ F   IQ
Sbjct: 216 FNQGVALDRQQRYAEAVAAYDRTLQLVPENAASWFNRGVTLEKLQRYTD-AVASFDRVIQ 274

Query: 444 SNPSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
             PS    W  +G  RA   + VE AI    KA+E  PN  +    RGI       +  A
Sbjct: 275 FAPSNPLVWFYKG--RALKHQWVEAAIGCFDKAIELHPNWPEAWMNRGIALSDAGQYEVA 332

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +       K++    +A+   G+AL  +G YK A +A   AIQ+  NF EAW H     +
Sbjct: 333 LSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQALSNAIQIQPNFPEAWYHRGLALE 392

Query: 563 DLANSEKALECLQQVLYIDK----RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            L   E+AL   ++V+ + +    R+ +++  R  +L  L ++ +A+   +  L + P++
Sbjct: 393 QLQRYEEALTAYEKVVQVTQEPMFRY-RSWVKRSEVLEKLERYPEALDAFAKVLEVKPND 451

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTA 673
            +    R         Y +AI  YD A+ +  +  + +     VL  +  Y + IA Y  
Sbjct: 452 AQAWMKRGDLLSLAQRYIDAIVAYDQAIAIWPNHYDPWMKRGRVLSKIGQYPQAIAAY-- 509

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQP 714
                     D    + P     W +R       EK++R P
Sbjct: 510 ----------DTVIQMKPTHSPAWLRR---GECLEKLHRYP 537



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 123/280 (43%), Gaps = 16/280 (5%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           FR  R + ++ + K  +A++ F++++K  P        RG         + A++   +A+
Sbjct: 149 FR-GRSLLELQQSK--AAVTAFNKVVKLKPKLSSGWYYRGLTFLSLDRPDLALTSLEQAV 205

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
             +P    AW  +G A        EA+    + L+  P +A     RG+   K + +  A
Sbjct: 206 ALDPQNPAAWFNQGVALDRQQRYAEAVAAYDRTLQLVPENAASWFNRGVTLEKLQRYTDA 265

Query: 503 VEDLSACVKLDKENKSAYTYLGLAL------SSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           V      ++    N   + Y G AL      ++IG + KA       I+L  N+ EAW +
Sbjct: 266 VASFDRVIQFAPSNPLVWFYKGRALKHQWVEAAIGCFDKA-------IELHPNWPEAWMN 318

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                 D    E AL    Q   I+   S A+  RG+ L+GLG++K AI+ LS+ + I P
Sbjct: 319 RGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQALSNAIQIQP 378

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           +  E  Y R      +  Y EA+  Y+  + +  + M ++
Sbjct: 379 NFPEAWYHRGLALEQLQRYEEALTAYEKVVQVTQEPMFRY 418



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 157/375 (41%), Gaps = 48/375 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A +N  +Y  AI+ +D  ++ +P        RG         + A++ F ++IQ 
Sbjct: 80  LKRGTALMNLHRYEEAIAGYDGAIQVNPDDYWGWTFRGRCLFHLNRYQEALASFDQSIQI 139

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N +  EAW  RG++   L +S  A+   +K ++ +P  +   + RG+        + A+ 
Sbjct: 140 NSNQYEAWYFRGRSLLELQQSKAAVTAFNKVVKLKPKLSSGWYYRGLTFLSLDRPDLALT 199

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---------- 554
            L   V LD +N +A+   G+AL     Y +A  A+ + +QL      +W          
Sbjct: 200 SLEQAVALDPQNPAAWFNQGVALDRQQRYAEAVAAYDRTLQLVPENAASWFNRGVTLEKL 259

Query: 555 -------------------GHLTQFYQDLANS----EKALECLQQVLYIDKRFSKAYHLR 591
                                L  FY+  A      E A+ C  + + +   + +A+  R
Sbjct: 260 QRYTDAVASFDRVIQFAPSNPLVWFYKGRALKHQWVEAAIGCFDKAIELHPNWPEAWMNR 319

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDYDAALDLEL 650
           G+ L   GQ++ A+        I+P N+   +L R    + +G Y++AI+    A+ ++ 
Sbjct: 320 GIALSDAGQYEVALSSFDQATKINP-NLSTAWLGRGMALYGLGRYKDAIQALSNAIQIQP 378

Query: 651 DSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD--IDGDIDPLFK-EYWCKRLHPKNVC 707
           +  E       A+Y + +AL    +       ++  +    +P+F+   W KR     V 
Sbjct: 379 NFPE-------AWYHRGLALEQLQRYEEALTAYEKVVQVTQEPMFRYRSWVKR---SEVL 428

Query: 708 EKVYRQPPLRDSLKK 722
           EK+ R P   D+  K
Sbjct: 429 EKLERYPEALDAFAK 443



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 98/253 (38%), Gaps = 37/253 (14%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RGIA  + G+Y  A+S FDQ  K +P    A +GRG A       + AI   + AIQ 
Sbjct: 317 MNRGIALSDAGQYEVALSSFDQATKINPNLSTAWLGRGMALYGLGRYKDAIQALSNAIQI 376

Query: 445 NPSAGEAWKRRGQA---------------------------------RAALGESVE---- 467
            P+  EAW  RG A                                 R+ + E +E    
Sbjct: 377 QPNFPEAWYHRGLALEQLQRYEEALTAYEKVVQVTQEPMFRYRSWVKRSEVLEKLERYPE 436

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           A+   +K LE +PN A    +RG +    + +  A+      + +   +   +   G  L
Sbjct: 437 ALDAFAKVLEVKPNDAQAWMKRGDLLSLAQRYIDAIVAYDQAIAIWPNHYDPWMKRGRVL 496

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
           S IG+Y +A  A+   IQ+      AW    +  + L    +A       L +D   + A
Sbjct: 497 SKIGQYPQAIAAYDTVIQMKPTHSPAWLRRGECLEKLHRYPEAARSYGVALEVDPTCTDA 556

Query: 588 YHLRGLLLHGLGQ 600
              R  L   L Q
Sbjct: 557 IDKRNRLQEKLAQ 569



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/196 (20%), Positives = 73/196 (37%), Gaps = 34/196 (17%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA------- 539
           +ERG   ++ K++  AV      ++       A    G AL ++  Y++A          
Sbjct: 46  YERGNRLYEQKNYAGAVAFYDKAIQKKPTMHRALLKRGTALMNLHRYEEAIAGYDGAIQV 105

Query: 540 ----------------HL-----------KAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
                           HL           ++IQ++ N  EAW    +   +L  S+ A+ 
Sbjct: 106 NPDDYWGWTFRGRCLFHLNRYQEALASFDQSIQINSNQYEAWYFRGRSLLELQQSKAAVT 165

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              +V+ +  + S  ++ RGL    L +   A+  L   + +DP N    + +       
Sbjct: 166 AFNKVVKLKPKLSSGWYYRGLTFLSLDRPDLALTSLEQAVALDPQNPAAWFNQGVALDRQ 225

Query: 633 GEYREAIKDYDAALDL 648
             Y EA+  YD  L L
Sbjct: 226 QRYAEAVAAYDRTLQL 241


>gi|113475613|ref|YP_721674.1| hypothetical protein Tery_1947 [Trichodesmium erythraeum IMS101]
 gi|110166661|gb|ABG51201.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 564

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 136/275 (49%), Gaps = 9/275 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S G+   N  +Y  AI+ FD+ +K +P   ++   +    +  ++   AI  + EA++  
Sbjct: 111 SYGVVLSNLKQYEQAIACFDKAIKINPNDYQSWFNKAIILSELKQDLPAIYCYKEALKIQ 170

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P  GE W  +GQA   + +  EA+     A + +P++ DI  +RG+  F+ + +  AV  
Sbjct: 171 PMKGEIWYGQGQALLNVQKYAEALAAYDCAAKLQPDNYDIWFKRGLALFQTQRYAEAVIS 230

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L  EN   +  LG+A S + +Y  A  +  KAI+L+ +  EAW     +Y+ LA
Sbjct: 231 YGHAIELQPENYLGWFNLGIAQSKLHKYHDAVSSFNKAIKLNPDDYEAW-----YYKGLA 285

Query: 566 N----SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
                 E  + CL + +  +    + +  RG +L  L ++++A++  +  + I+ +  E 
Sbjct: 286 LKNHWKEGGVACLDKAINFNPNLPEIWISRGYILLDLFKYREALESFNKAITINSNYPES 345

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
              R   + A+G+Y EA+  Y  A+ +E   +E +
Sbjct: 346 WLGRGKAWMALGKYNEALIAYGNAVSIEPYFLEAW 380



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 119/273 (43%), Gaps = 9/273 (3%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D    RG+A     +YA A+  +   ++  P         G A++   +   A+S F +A
Sbjct: 209 DIWFKRGLALFQTQRYAEAVISYGHAIELQPENYLGWFNLGIAQSKLHKYHDAVSSFNKA 268

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP   EAW  +G A     +    +  L KA+ F PN  +I   RG +      +  
Sbjct: 269 IKLNPDDYEAWYYKGLALKNHWKE-GGVACLDKAINFNPNLPEIWISRGYILLDLFKYRE 327

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+E  +  + ++     ++   G A  ++G+Y +A  A+  A+ ++  FLEAW    +  
Sbjct: 328 ALESFNKAITINSNYPESWLGRGKAWMALGKYNEALIAYGNAVSIEPYFLEAWNCRGEAL 387

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHL------RGLLLHGLGQHKKAIKDLSSGLGID 615
           + + N ++AL    +V  I   F +   +      RG  L  L ++ +AI+  +  +   
Sbjct: 388 ERVQNYDQALAAYDKV--IKMSFEQGVSVAKVGLQRGAALEKLERYPEAIEAYNLVIEKQ 445

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           P+N +    R      +  Y EA+  Y  A+ +
Sbjct: 446 PNNFDGWLNRGLNLEKMANYEEAVLSYSRAISI 478



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 5/272 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+A  N  K    ++  D+ +  +P  PE  I RG       +   A+  F +AI  N 
Sbjct: 282 KGLALKNHWK-EGGVACLDKAINFNPNLPEIWISRGYILLDLFKYREALESFNKAITINS 340

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  E+W  RG+A  ALG+  EA+     A+  EP   +  + RG    + ++++ A+   
Sbjct: 341 NYPESWLGRGKAWMALGKYNEALIAYGNAVSIEPYFLEAWNCRGEALERVQNYDQALAAY 400

Query: 507 SACVKLDKENKSAYTYLGL----ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
              +K+  E   +   +GL    AL  +  Y +A EA+   I+   N  + W +     +
Sbjct: 401 DKVIKMSFEQGVSVAKVGLQRGAALEKLERYPEAIEAYNLVIEKQPNNFDGWLNRGLNLE 460

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            +AN E+A+    + + I     +A+    L+L  L +  +AI   +  + + P N E  
Sbjct: 461 KMANYEEAVLSYSRAISIWPSNYQAWLQLALMLEKLERLDEAIVAYNKIISLRPGNHETW 520

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSME 654
             R      +G  +EA+  Y   L+++ D  E
Sbjct: 521 LKRGLILERLGYVQEAVSSYKIVLEIKPDYHE 552



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 111/242 (45%), Gaps = 4/242 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +SRG   ++  KY  A+  F++ +  +  YPE+ +GRG A     +   A+  +  A+  
Sbjct: 313 ISRGYILLDLFKYREALESFNKAITINSNYPESWLGRGKAWMALGKYNEALIAYGNAVSI 372

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALE--FEP--NSADILHERGIVNFKFKDFN 500
            P   EAW  RG+A   +    +A+    K ++  FE   + A +  +RG    K + + 
Sbjct: 373 EPYFLEAWNCRGEALERVQNYDQALAAYDKVIKMSFEQGVSVAKVGLQRGAALEKLERYP 432

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+E  +  ++    N   +   GL L  +  Y++A  ++ +AI +  +  +AW  L   
Sbjct: 433 EAIEAYNLVIEKQPNNFDGWLNRGLNLEKMANYEEAVLSYSRAISIWPSNYQAWLQLALM 492

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            + L   ++A+    +++ +     + +  RGL+L  LG  ++A+      L I P   E
Sbjct: 493 LEKLERLDEAIVAYNKIISLRPGNHETWLKRGLILERLGYVQEAVSSYKIVLEIKPDYHE 552

Query: 621 CL 622
            +
Sbjct: 553 AI 554



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 86/181 (47%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           ++RG   ++   + +A+      VK+  +    +  L  ALS + +Y++A EA+ +++ L
Sbjct: 42  YDRGNRLYEMGRYESAIPYYENAVKIKPDWAIGWLKLAEALSKLQKYEQAVEAYKRSLSL 101

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
            +N  +AW        +L   E+A+ C  + + I+    +++  + ++L  L Q   AI 
Sbjct: 102 KQNAHQAWHSYGVVLSNLKQYEQAIACFDKAIKINPNDYQSWFNKAIILSELKQDLPAIY 161

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
                L I P   E  Y +      + +Y EA+  YD A  L+ D+ + +  + LA +Q 
Sbjct: 162 CYKEALKIQPMKGEIWYGQGQALLNVQKYAEALAAYDCAAKLQPDNYDIWFKRGLALFQT 221

Query: 667 E 667
           +
Sbjct: 222 Q 222



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/195 (21%), Positives = 84/195 (43%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG     +G    AI     A++ +P+ A    +      K + +  AVE     + L +
Sbjct: 44  RGNRLYEMGRYESAIPYYENAVKIKPDWAIGWLKLAEALSKLQKYEQAVEAYKRSLSLKQ 103

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
               A+   G+ LS++ +Y++A     KAI+++ N  ++W +      +L     A+ C 
Sbjct: 104 NAHQAWHSYGVVLSNLKQYEQAIACFDKAIKINPNDYQSWFNKAIILSELKQDLPAIYCY 163

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++ L I     + ++ +G  L  + ++ +A+        + P N +  + R         
Sbjct: 164 KEALKIQPMKGEIWYGQGQALLNVQKYAEALAAYDCAAKLQPDNYDIWFKRGLALFQTQR 223

Query: 635 YREAIKDYDAALDLE 649
           Y EA+  Y  A++L+
Sbjct: 224 YAEAVISYGHAIELQ 238


>gi|452211222|ref|YP_007491336.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
 gi|452101124|gb|AGF98064.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
          Length = 1085

 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 132/576 (22%), Positives = 246/576 (42%), Gaps = 71/576 (12%)

Query: 80  SQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSAD 139
           S+L  +K  ++  D+A+ LD     A+  K  A + +GR E+++  +++  E A   SA+
Sbjct: 436 SKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALARIGRYEDSIVCYDRVLEVA-PDSAE 494

Query: 140 L--KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKM-----SETSENH 192
           +   + L L+EL    +   +  C        S+ +V+   LN + +M     +  S N+
Sbjct: 495 IWYNKGLLLDEL---GRYQEASDCYSQALQINSNYSVARFRLNKDIEMLSGNSTSISANN 551

Query: 193 NKSDICDSSSQSRDV-SETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSGLHINGKLREVS 251
             ++I    + +    S   S     PD                       I+G ++++S
Sbjct: 552 KNTNINPQKAITGGFWSYLLSYKYASPD-------------------DNTEISGSIKDLS 592

Query: 252 E--NHNGSSDGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHD 309
               ++ +  G  ST++  +  E +   S D  +   P+   +  E+            D
Sbjct: 593 PEFGYDEAWYGKASTYSKLEMYE-DALHSYDMALAINPVRTEAWYEKGS--------ALD 643

Query: 310 KLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFC 369
           KL     ++       E Y K+   D +SS++          W  +  TS++  R ++  
Sbjct: 644 KLGKSEEAM-------ECYQKALDIDPQSSNA----------WYGMASTSSDLGRAEEAI 686

Query: 370 VT--RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
               ++ K  S   +    + +A  + G+Y  A++ F+ +L+ +P   EAL GR  A A 
Sbjct: 687 AYYDQLLKLNSTDSEALQGKSLALASLGRYDEAVACFNPLLELEPENVEALEGRAFALAR 746

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
               EAA+ D+   ++ +P+  +A   +      LG   EA     + LE  P + +I++
Sbjct: 747 SGRPEAALEDYDVIMKLDPTNSKALAEKASLLEELGRYDEAALTYGEILEITPENREIMY 806

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G       DF AA+      + LD +N  A    G ALS + +Y++A   + KA++ D
Sbjct: 807 RQGKALEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYD 866

Query: 548 RNFLEAWGHLTQFYQDLAN-----SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
            +   AW     +++  AN     +  ALEC  + + +      A++ +G L + LG   
Sbjct: 867 PDNPAAW-----YFKGCANFAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVN 921

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
           ++I    S L IDP +   LY +   ++ I EY EA
Sbjct: 922 ESINSYESALEIDPDSPSALYNKRFSHYRIKEYDEA 957



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 132/281 (46%), Gaps = 4/281 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  +I+ +D  ++  P+  E+   +G      +    AI+ + +++ ++      W ++
Sbjct: 67  RYEESIACYDMAIETFPVSSESWYKKGDEYIQTKNYIEAINCYEKSLATDNYLSRVWFQK 126

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
             A   LG   EA+     +++F  NS+  L  +G    + +++  A+   +  + +  E
Sbjct: 127 ATASEKLGLDQEALTSYDTSIQFGANSSKALQMQGKAYAQLENYEEAMNCFNRALNVTPE 186

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +   +   G+     G+Y+ A E + +AI L+ + +EAW +     + +   + AL C +
Sbjct: 187 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 246

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            VL  +     A   +GL L  LG++++A++     L   P N E  Y + S  +A+G+Y
Sbjct: 247 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 306

Query: 636 REAIKDYDAALD----LELDSMEKFVLQCLAFYQKEIALYT 672
             AI  YD AL+    +E+      +L+ L  Y   + +Y+
Sbjct: 307 DAAIICYDRALNPDAGIEIQEAGDSLLESLKAYDSSLPVYS 347



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 149/354 (42%), Gaps = 43/354 (12%)

Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           DF L   +GI     G Y SAI  +DQ +  +P   EA   +G         + A++ + 
Sbjct: 187 DFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERMEMYQDALTCYE 246

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
             + S P    A +++G     LG + EA+Q   + L + P++ +  + +G V      +
Sbjct: 247 FVLLSEPENLSALQKKGLCLERLGRNEEALQCYDEILVYSPDNTEAWYSKGSVLNAMGQY 306

Query: 500 NAAV-------------------EDLSACVKLDKENKSAYTYL--------------GLA 526
           +AA+                   + L   +K    +   Y+ +              G+A
Sbjct: 307 DAAIICYDRALNPDAGIEIQEAGDSLLESLKAYDSSLPVYSEVPEFKSPAVKIWYDKGMA 366

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
             ++G Y+ A E + K ++ + +    W         L  S +A+ C  + L +D  ++K
Sbjct: 367 FDNLGNYESALECYNKVLETEPDHAIIWYQKGLNLDRLNKSAEAVGCYDKALKLDSGYAK 426

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            ++ +G     LG++K A+K     + +D +     Y +A     IG Y ++I  YD  L
Sbjct: 427 VWYKKGYDSSKLGKYKDAVKSYDEAIDLDENYTLAWYGKAFALARIGRYEDSIVCYDRVL 486

Query: 647 DLELDSME-----KFVLQCLAFYQKEIALYT-ASKINSEF--CWFDIDGDIDPL 692
           ++  DS E       +L  L  YQ+    Y+ A +INS +    F ++ DI+ L
Sbjct: 487 EVAPDSAEIWYNKGLLLDELGRYQEASDCYSQALQINSNYSVARFRLNKDIEML 540



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 127/305 (41%), Gaps = 7/305 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A    GK   A+  + + L  DP    A  G  +  +     E AI+ + + ++ N 
Sbjct: 638 KGSALDKLGKSEEAMECYQKALDIDPQSSNAWYGMASTSSDLGRAEEAIAYYDQLLKLNS 697

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA + +  A A+LG   EA+   +  LE EP + + L  R     +     AA+ED 
Sbjct: 698 TDSEALQGKSLALASLGRYDEAVACFNPLLELEPENVEALEGRAFALARSGRPEAALEDY 757

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +KLD  N  A       L  +G Y +A   + + +++     E      +  + + +
Sbjct: 758 DVIMKLDPTNSKALAEKASLLEELGRYDEAALTYGEILEITPENREIMYRQGKALEAMGD 817

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A+ C  ++L +D +   A + +G  L  + ++++A+      L  DP N    Y + 
Sbjct: 818 FEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPAAWYFKG 877

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
               AI     A++ ++  + L+ D +        A+Y K         +N     ++  
Sbjct: 878 CANFAISSNNAALECFNKTVQLKPDCI-------TAWYNKGYLANVLGDVNESINSYESA 930

Query: 687 GDIDP 691
            +IDP
Sbjct: 931 LEIDP 935



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 139/351 (39%), Gaps = 48/351 (13%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A      Y  A++ F++ L   P   E    +G       + E+AI  + +AI  NP
Sbjct: 160 QGKAYAQLENYEEAMNCFNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISLNP 219

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF----EPNSADILHERGIVNFKFKDFNAA 502
              EAW  +G       E +E  QD     EF    EP +   L ++G+   +      A
Sbjct: 220 DLVEAWYNKGMDL----ERMEMYQDALTCYEFVLLSEPENLSALQKKGLCLERLGRNEEA 275

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF------------ 550
           ++     +    +N  A+   G  L+++G+Y  A   + +A+  D               
Sbjct: 276 LQCYDEILVYSPDNTEAWYSKGSVLNAMGQYDAAIICYDRALNPDAGIEIQEAGDSLLES 335

Query: 551 -------LEAWGHLTQF--------------YQDLANSEKALECLQQVLYIDKRFSKAYH 589
                  L  +  + +F              + +L N E ALEC  +VL  +   +  ++
Sbjct: 336 LKAYDSSLPVYSEVPEFKSPAVKIWYDKGMAFDNLGNYESALECYNKVLETEPDHAIIWY 395

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            +GL L  L +  +A+      L +D    +  Y +      +G+Y++A+K YD A+DL+
Sbjct: 396 QKGLNLDRLNKSAEAVGCYDKALKLDSGYAKVWYKKGYDSSKLGKYKDAVKSYDEAIDLD 455

Query: 650 LDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
               E +    LA+Y K  AL    +       +D   ++ P   E W  +
Sbjct: 456 ----ENYT---LAWYGKAFALARIGRYEDSIVCYDRVLEVAPDSAEIWYNK 499



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 132/314 (42%), Gaps = 7/314 (2%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A+  +D  L  +P+  EA   +G+A     + E A+  + +A+  +P +  AW    
Sbjct: 614 YEDALHSYDMALAINPVRTEAWYEKGSALDKLGKSEEAMECYQKALDIDPQSSNAWYGMA 673

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
              + LG + EAI    + L+     ++ L  + +       ++ AV   +  ++L+ EN
Sbjct: 674 STSSDLGRAEEAIAYYDQLLKLNSTDSEALQGKSLALASLGRYDEAVACFNPLLELEPEN 733

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A      AL+  G  + A E +   ++LD    +A        ++L   ++A     +
Sbjct: 734 VEALEGRAFALARSGRPEAALEDYDVIMKLDPTNSKALAEKASLLEELGRYDEAALTYGE 793

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
           +L I     +  + +G  L  +G  + AI      L +DP NI+ +  +      + +Y+
Sbjct: 794 ILEITPENREIMYRQGKALEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQ 853

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEY 696
           EA+  YD AL+ + D+         A+Y K  A +  S  N+    F+    + P     
Sbjct: 854 EALATYDKALEYDPDNPA-------AWYFKGCANFAISSNNAALECFNKTVQLKPDCITA 906

Query: 697 WCKRLHPKNVCEKV 710
           W  + +  NV   V
Sbjct: 907 WYNKGYLANVLGDV 920



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 129/325 (39%), Gaps = 42/325 (12%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  A+  +D+ +  D  Y  A  G+  A A     E +I  +   ++  P + E W  
Sbjct: 439 GKYKDAVKSYDEAIDLDENYTLAWYGKAFALARIGRYEDSIVCYDRVLEVAPDSAEIWYN 498

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA-CVKLD 513
           +G     LG   EA    S+AL+   N +       +  F+    N  +E LS     + 
Sbjct: 499 KGLLLDELGRYQEASDCYSQALQINSNYS-------VARFRL---NKDIEMLSGNSTSIS 548

Query: 514 KENKSAY-----TYLGLALSSIGEYKKAEE-------AHLKAIQLDRNFLEAWGHLTQFY 561
             NK+          G   S +  YK A           +K +  +  + EAW      Y
Sbjct: 549 ANNKNTNINPQKAITGGFWSYLLSYKYASPDDNTEISGSIKDLSPEFGYDEAWYGKASTY 608

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             L   E AL      L I+   ++A++ +G  L  LG+ ++A++     L IDP +   
Sbjct: 609 SKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGKSEEAMECYQKALDIDPQSSNA 668

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFC 681
            Y  AS    +G   EAI  YD    L+L+S +   LQ      K +AL +  + +    
Sbjct: 669 WYGMASTSSDLGRAEEAIAYYDQL--LKLNSTDSEALQ-----GKSLALASLGRYDEAVA 721

Query: 682 WFDIDGDIDPLFKEYWCKRLHPKNV 706
            F      +PL +      L P+NV
Sbjct: 722 CF------NPLLE------LEPENV 734



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 80/164 (48%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A    G + +AI+ +D+IL  DP   +A+  +G A +   + + A++ + +A++ +P
Sbjct: 808 QGKALEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDP 867

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  +G A  A+  +  A++  +K ++ +P+     + +G +     D N ++   
Sbjct: 868 DNPAAWYFKGCANFAISSNNAALECFNKTVQLKPDCITAWYNKGYLANVLGDVNESINSY 927

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            + +++D ++ SA      +   I EY +A     K   LD  F
Sbjct: 928 ESALEIDPDSPSALYNKRFSHYRIKEYDEASVCKAKLDSLDPGF 971



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 97/249 (38%), Gaps = 29/249 (11%)

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           E +   PS+ E    +G    +L E   +I+   KALE EPNS+   + +G      + +
Sbjct: 9   EVLSQRPSSVEGLLTKGNDLYSLKEYELSIECFEKALEIEPNSSMSWYGKGCSLSALERY 68

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE------------AHLKAIQLD 547
             ++    AC  +  E           +SS   YKK +E             + K++  D
Sbjct: 69  EESI----ACYDMAIET--------FPVSSESWYKKGDEYIQTKNYIEAINCYEKSLATD 116

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
                 W       + L   ++AL      +      SKA  ++G     L  +++A+  
Sbjct: 117 NYLSRVWFQKATASEKLGLDQEALTSYDTSIQFGANSSKALQMQGKAYAQLENYEEAMNC 176

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQCLA 662
            +  L + P + E    +   Y   G+Y  AI+ YD A+ L  D +E +      L+ + 
Sbjct: 177 FNRALNVTPEDFELWNQKGIMYDLSGDYESAIECYDQAISLNPDLVEAWYNKGMDLERME 236

Query: 663 FYQKEIALY 671
            YQ  +  Y
Sbjct: 237 MYQDALTCY 245



 Score = 43.1 bits (100), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)

Query: 46  LCSLRNWSKAIRILDSLLA-QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L ++ ++  AI   D +LA     I  I N+ F  S++E ++  +   DKAL+ DP    
Sbjct: 812 LEAMGDFEAAIACYDKILALDPKNIDAINNKGFALSKMEKYQEALATYDKALEYDPDNPA 871

Query: 105 AYILKGCAFSALGRKEEALSVWEK 128
           A+  KGCA  A+     AL  + K
Sbjct: 872 AWYFKGCANFAISSNNAALECFNK 895



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query: 75  RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           +A  YS+LE+++  +   D AL ++P   +A+  KG A   LG+ EEA+  ++K 
Sbjct: 604 KASTYSKLEMYEDALHSYDMALAINPVRTEAWYEKGSALDKLGKSEEAMECYQKA 658



 Score = 40.8 bits (94), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQD 71
           L +  + I   D+L++++S  + A+  +  LA L SL  + +A+   + LL    E ++ 
Sbjct: 679 LGRAEEAIAYYDQLLKLNSTDSEALQGK-SLA-LASLGRYDEAVACFNPLLELEPENVEA 736

Query: 72  ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
           +  RAF  ++    +  + D D  ++LDPT  +A   K      LGR +EA
Sbjct: 737 LEGRAFALARSGRPEAALEDYDVIMKLDPTNSKALAEKASLLEELGRYDEA 787


>gi|42525946|ref|NP_971044.1| TPR [Treponema denticola ATCC 35405]
 gi|449112922|ref|ZP_21749468.1| hypothetical protein HMPREF9735_02517 [Treponema denticola ATCC
           33521]
 gi|449114862|ref|ZP_21751330.1| hypothetical protein HMPREF9721_01848 [Treponema denticola ATCC
           35404]
 gi|41815996|gb|AAS10925.1| TPR domain protein [Treponema denticola ATCC 35405]
 gi|448954305|gb|EMB35087.1| hypothetical protein HMPREF9721_01848 [Treponema denticola ATCC
           35404]
 gi|448955039|gb|EMB35807.1| hypothetical protein HMPREF9735_02517 [Treponema denticola ATCC
           33521]
          Length = 338

 Score =  100 bits (248), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 1/268 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  + + ++ DP Y EA + RG    +  E E A++DF   I+ NP   +A+  +G   
Sbjct: 59  AIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKALADFDRIIELNPKEDKAYYFKGLLF 118

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G   +AI++L+ A+       +    R     +  ++  A ED++  +KL+ ++   
Sbjct: 119 NDAGNYNKAIENLNTAINLNDKDYEYYEARSRAYEQINEYEKAFEDINTAIKLNPKSAKL 178

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G           A      AI+LD N +  +  L   Y ++  + +A E + +++ 
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIAIKLDSNDIWPYNGLLFIYLEMDKNNEAFEIVNKMIK 238

Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
           +   +    Y +RG L    GQ+K+AI+D ++G+ + P N     +R   Y  + EY++A
Sbjct: 239 MKPSWIGILYGIRGTLFSMRGQYKEAIEDCNTGIRMYPHNASLYNIRGKIYFDLKEYKKA 298

Query: 639 IKDYDAALDLELDSMEKFVLQCLAFYQK 666
           IKD+D A+   L++        + + QK
Sbjct: 299 IKDFDMAIKFALENQNTEKQDAIEYKQK 326



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 80/149 (53%), Gaps = 3/149 (2%)

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           K+N S   Y  +A ++  E K    A   + KAI+ D  ++EA+ +  + Y  +   EKA
Sbjct: 34  KQNYSQAEYFNIAGNTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKA 93

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           L    +++ ++ +  KAY+ +GLL +  G + KAI++L++ + ++  + E    R+  Y 
Sbjct: 94  LADFDRIIELNPKEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSRAYE 153

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQ 659
            I EY +A +D + A+ L   S + + L+
Sbjct: 154 QINEYEKAFEDINTAIKLNPKSAKLYNLR 182



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 79/177 (44%)

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + N S  E +   G       +   AI   +KA+E +P   +    RG + +   +   A
Sbjct: 34  KQNYSQAEYFNIAGNTAKEKKDGTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKA 93

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D    ++L+ +   AY + GL  +  G Y KA E    AI L+    E +   ++ Y+
Sbjct: 94  LADFDRIIELNPKEDKAYYFKGLLFNDAGNYNKAIENLNTAINLNDKDYEYYEARSRAYE 153

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            +   EKA E +   + ++ + +K Y+LRG L     +   AI D    + +D ++I
Sbjct: 154 QINEYEKAFEDINTAIKLNPKSAKLYNLRGRLHEHFERTDDAINDFKIAIKLDSNDI 210


>gi|332710566|ref|ZP_08430511.1| serine/threonine protein kinase [Moorea producens 3L]
 gi|332350621|gb|EGJ30216.1| serine/threonine protein kinase [Moorea producens 3L]
          Length = 726

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 120/255 (47%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A++ +DQ ++ +P Y  A  GRG         +AAI  F  A++  P+  +AW   G
Sbjct: 396 YEEALNAYDQAIQIEPDYSAAWKGRGKTLEQLERYDAAIKAFNSALELQPNDLDAWISLG 455

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
             +       +AI    KAL+ +P+S    + RG      + + AAVE     +     +
Sbjct: 456 NVQVKSKNYFDAIASFDKALKLKPDSYQAWYRRGWALHNLRRYKAAVESYDRALDYKPNS 515

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A+   G  LS++ +YK A +++ +A+Q   NF +AW         L   ++AL    Q
Sbjct: 516 AEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKYQEALGSFDQ 575

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            + +  +  +A++ RG  LH + +++ A++     + +     +  Y R + ++ +  Y+
Sbjct: 576 AVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRGNTFYKLERYK 635

Query: 637 EAIKDYDAALDLELD 651
           +AI  Y  A++ + D
Sbjct: 636 DAIASYQQAVNYKPD 650



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 6/275 (2%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+  +++ ++    Y  A  G+G      +  E A++ + +AIQ  P    AWK R
Sbjct: 361 RYEQALDAYNRAVEIRGEYAPAWQGQGKTLFALKYYEEALNAYDQAIQIEPDYSAAWKGR 420

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G+    L     AI+  + ALE +PN  D     G V  K K++  A+      +KL  +
Sbjct: 421 GKTLEQLERYDAAIKAFNSALELQPNDLDAWISLGNVQVKSKNYFDAIASFDKALKLKPD 480

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK---ALE 572
           +  A+   G AL ++  YK A E++ +A+    N  EAW    Q   DL+N  K   A +
Sbjct: 481 SYQAWYRRGWALHNLRRYKAAVESYDRALDYKPNSAEAW---YQRGNDLSNLRKYKDAAK 537

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
             QQ +     F +A++  G  L+ LG++++A+      + + P + +  Y R    H +
Sbjct: 538 SYQQAVQFQPNFYQAWYSWGNTLNQLGKYQEALGSFDQAVKLQPKSYQAWYSRGWTLHQV 597

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
             Y +A++ Y  A+ L+    + +  +   FY+ E
Sbjct: 598 QRYEDALEAYYKAIKLKSKPYQAWYSRGNTFYKLE 632



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 111/245 (45%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  +S G  QV    Y  AI+ FD+ LK  P   +A   RG A    R  +AA+  +  
Sbjct: 448 LDAWISLGNVQVKSKNYFDAIASFDKALKLKPDSYQAWYRRGWALHNLRRYKAAVESYDR 507

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+   P++ EAW +RG   + L +  +A +   +A++F+PN     +  G    +   + 
Sbjct: 508 ALDYKPNSAEAWYQRGNDLSNLRKYKDAAKSYQQAVQFQPNFYQAWYSWGNTLNQLGKYQ 567

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+      VKL  ++  A+   G  L  +  Y+ A EA+ KAI+L     +AW      
Sbjct: 568 EALGSFDQAVKLQPKSYQAWYSRGWTLHQVQRYEDALEAYYKAIKLKSKPYQAWYSRGNT 627

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           +  L   + A+   QQ +     +S+A++  G  L    ++KKAI      +   P+  E
Sbjct: 628 FYKLERYKDAIASYQQAVNYKPDYSQAWYSLGNALVKRNKYKKAIAAYDKAVRYQPNYRE 687

Query: 621 CLYLR 625
            +  R
Sbjct: 688 AIKAR 692



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 86/198 (43%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W  +G+    L    +A+   ++A+E     A     +G   F  K +  A+      ++
Sbjct: 349 WYNQGETFLELKRYEQALDAYNRAVEIRGEYAPAWQGQGKTLFALKYYEEALNAYDQAIQ 408

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           ++ +  +A+   G  L  +  Y  A +A   A++L  N L+AW  L        N   A+
Sbjct: 409 IEPDYSAAWKGRGKTLEQLERYDAAIKAFNSALELQPNDLDAWISLGNVQVKSKNYFDAI 468

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               + L +     +A++ RG  LH L ++K A++     L   P++ E  Y R +    
Sbjct: 469 ASFDKALKLKPDSYQAWYRRGWALHNLRRYKAAVESYDRALDYKPNSAEAWYQRGNDLSN 528

Query: 632 IGEYREAIKDYDAALDLE 649
           + +Y++A K Y  A+  +
Sbjct: 529 LRKYKDAAKSYQQAVQFQ 546



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 83/189 (43%), Gaps = 7/189 (3%)

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
           F   +A   + +G    + K +  A++  +  V++  E   A+   G  L ++  Y++A 
Sbjct: 341 FRGANATDWYNQGETFLELKRYEQALDAYNRAVEIRGEYAPAWQGQGKTLFALKYYEEAL 400

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
            A+ +AIQ++ ++  AW    +  + L   + A++     L +      A+   G +   
Sbjct: 401 NAYDQAIQIEPDYSAAWKGRGKTLEQLERYDAAIKAFNSALELQPNDLDAWISLGNVQVK 460

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
              +  AI      L + P + +  Y R    H +  Y+ A++ YD ALD + +S E   
Sbjct: 461 SKNYFDAIASFDKALKLKPDSYQAWYRRGWALHNLRRYKAAVESYDRALDYKPNSAE--- 517

Query: 658 LQCLAFYQK 666
               A+YQ+
Sbjct: 518 ----AWYQR 522


>gi|159028862|emb|CAO90667.1| mom72 [Microcystis aeruginosa PCC 7806]
          Length = 268

 Score =  100 bits (248), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 10/207 (4%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 38  NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 97

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL   PN  + L  R  V++  K + AAVED +  + L+      + Y G A   +
Sbjct: 98  DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 157

Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           G + +A E + KA+ L      DR F     +    Y      E AL    + L I+  F
Sbjct: 158 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 213

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           ++AYH RGL  + LG  +KAI DL + 
Sbjct: 214 AEAYHNRGLTYYKLGNREKAIADLEAA 240



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 2/192 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++  G Y+ AI+ F Q L+ +P   +A   RG A     + E AI+D+T+A+  N
Sbjct: 47  NRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQALTIN 106

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   R        +   A++D +KA+    N AD    RG           A+ED
Sbjct: 107 PNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGRHLEAIED 166

Query: 506 LSACVKLD--KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +  + L   +     +    LA +  G+ + A   + ++++++ NF EA+ +    Y  
Sbjct: 167 YTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESLKINANFAEAYHNRGLTYYK 226

Query: 564 LANSEKALECLQ 575
           L N EKA+  L+
Sbjct: 227 LGNREKAIADLE 238



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 2/218 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  +    +NP     +  RG  R   G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 28  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 87

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A            +Y+ A E   KAI L+ NF + +
Sbjct: 88  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 147

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   + ++ R L  +  GQ + A++D +  L
Sbjct: 148 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESL 207

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            I+ +  E  + R   Y+ +G   +AI D +AA  L L
Sbjct: 208 KINANFAEAYHNRGLTYYKLGNREKAIADLEAAARLAL 245



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 97/199 (48%), Gaps = 2/199 (1%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  LS      P  A   + RG+      D++ A+ D +  ++L+ ++  AY   G A  
Sbjct: 28  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 87

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+Y++A   + +A+ ++ N++ A G+    +      E A+E   + + ++  F+  +
Sbjct: 88  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 147

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREAIKDYDAAL 646
             RG     LG+H +AI+D +  L +  +  +    Y RA  Y+  G+   A++DY+ +L
Sbjct: 148 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESL 207

Query: 647 DLELDSMEKFVLQCLAFYQ 665
            +  +  E +  + L +Y+
Sbjct: 208 KINANFAEAYHNRGLTYYK 226



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A++  G+Y  AI+ + Q L  +P Y  AL  R       ++ EAA+ D T+A
Sbjct: 77  DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 136

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG  +EAI+D +KAL  +       I + R +   +    
Sbjct: 137 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 196

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D +  +K++     AY   GL    +G  +KA
Sbjct: 197 EMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 233



 Score = 41.2 bits (95), Expect = 3.2,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + G++  AI  + + L       +  I    A A+ R  + E A+ D+ 
Sbjct: 145 DFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYN 204

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL  A
Sbjct: 205 ESLKINANFAEAYHNRGLTYYKLGNREKAIADLEAA 240


>gi|359460872|ref|ZP_09249435.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris sp. CCMEE 5410]
          Length = 810

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 7/275 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  AI+ FD +L++ P    A   RG  R    E +AAISD+ EA+  +P   E +  
Sbjct: 389 GKYPDAITQFDTLLEQQPKTAAAFRERGAIRFAIGEYQAAISDYNEALTLDPKDAETYNH 448

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A+  LG+  +AI D  KA+  +PN A      G V F      AAV++L   ++ + 
Sbjct: 449 RGDAQVELGKYEKAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAES 508

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            + SA+   G   S++G+   AE+   +A++L     + +         L   + A+   
Sbjct: 509 NHLSAHVNRGSYRSALGDSDGAEQDWERALELPVRTAKEYTSRGYAKSRLDRKQDAIADY 568

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q L I+ + ++A+   G + +  G+ ++A K     L  +P++     LR       G+
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQARKSFDQALQSNPNSTSAYLLRGELRAYQGQ 628

Query: 635 ---YREAIKDYDAALDLELDSMEKFVL--QCLAFY 664
              +  A++DYD A  + ++  + FVL  +C A +
Sbjct: 629 QADFEGALQDYDRA--IAINPKDPFVLNNRCGALF 661



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 131/265 (49%), Gaps = 3/265 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG AQV  GKY  AI+ + + ++  P   +  +  G+    Q +LEAA+ +  +AIQ+  
Sbjct: 449 RGDAQVELGKYEKAIADYRKAIRLQPNQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAES 508

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   A   RG  R+ALG+S  A QD  +ALE    +A     RG    +      A+ D 
Sbjct: 509 NHLSAHVNRGSYRSALGDSDGAEQDWERALELPVRTAKEYTSRGYAKSRLDRKQDAIADY 568

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQD 563
           +  + ++ +   A+T LG      GE ++A ++  +A+Q + N   A+   G L  +   
Sbjct: 569 NQALTINPQLTRAHTNLGGVFYEQGEIEQARKSFDQALQSNPNSTSAYLLRGELRAYQGQ 628

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            A+ E AL+   + + I+ +     + R   L  L + ++A+ D + GL I+PS+     
Sbjct: 629 QADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRALADCNKGLEINPSSAALYT 688

Query: 624 LRASCYHAIGEYREAIKDYDAALDL 648
           +R + Y  + +Y +AI+DY   + +
Sbjct: 689 VRGNIYLRLKQYEKAIQDYGRTIQI 713



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 133/320 (41%), Gaps = 11/320 (3%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G + SA   F+Q L+    Y EA +  G   A   +   AI+ F   ++  P    A++ 
Sbjct: 355 GNWQSATENFEQALELKADYTEAALKLGETYAEIGKYPDAITQFDTLLEQQPKTAAAFRE 414

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG  R A+GE   AI D ++AL  +P  A+  + RG    +   +  A+ D    ++L  
Sbjct: 415 RGAIRFAIGEYQAAISDYNEALTLDPKDAETYNHRGDAQVELGKYEKAIADYRKAIRLQP 474

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
                Y  LG      G+ + A +   KAIQ + N L A  +   +   L +S+ A +  
Sbjct: 475 NQAQGYLNLGSVFFVQGKLEAAVKELDKAIQAESNHLSAHVNRGSYRSALGDSDGAEQDW 534

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++ L +  R +K Y  RG     L + + AI D +  L I+P            ++  GE
Sbjct: 535 ERALELPVRTAKEYTSRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVFYEQGE 594

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDI----- 689
             +A K +D AL    +S   ++L+       E+  Y   + + E    D D  I     
Sbjct: 595 IEQARKSFDQALQSNPNSTSAYLLRG------ELRAYQGQQADFEGALQDYDRAIAINPK 648

Query: 690 DPLFKEYWCKRLHPKNVCEK 709
           DP      C  L   N  ++
Sbjct: 649 DPFVLNNRCGALFSLNELQR 668



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 31/266 (11%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG A+    +   AI+ ++Q L  +P    A    G     Q E+E A   F +A+QSN
Sbjct: 550 SRGYAKSRLDRKQDAIADYNQALTINPQLTRAHTNLGGVFYEQGEIEQARKSFDQALQSN 609

Query: 446 PSAGEAWKRRGQARAALGESVE---AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           P++  A+  RG+ RA  G+  +   A+QD  +A+   P    +L+ R    F   +   A
Sbjct: 610 PNSTSAYLLRGELRAYQGQQADFEGALQDYDRAIAINPKDPFVLNNRCGALFSLNELQRA 669

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D +  ++++  + + YT  G     + +Y+KA + + + IQ+                
Sbjct: 670 LADCNKGLEINPSSAALYTVRGNIYLRLKQYEKAIQDYGRTIQI---------------- 713

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
              N  +  E   Q  Y   R S    L+ L          A+KDL+  L I P   E  
Sbjct: 714 ---NDTRKSEVRSQAAY-SNRASARIQLKDL--------DGALKDLNDALRIKPDAAEDY 761

Query: 623 YLRASCYHAIGEYREAIKDYDAALDL 648
           Y R   Y    + ++AI D   A DL
Sbjct: 762 YKRGLLYSVQNKRQDAITDLKKAADL 787


>gi|425440193|ref|ZP_18820501.1| Mom72 protein [Microcystis aeruginosa PCC 9717]
 gi|389719413|emb|CCH96738.1| Mom72 protein [Microcystis aeruginosa PCC 9717]
          Length = 260

 Score =  100 bits (248), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 10/207 (4%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL   PN  + L  R  V++  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           G + +A E + KA+ L      DR F     +    Y      E AL    + L I+  F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           ++AYH RGL  + LG  +KAI DL + 
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEAA 232



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 3/208 (1%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           V++ + +   +V+F  +RG+ ++  G Y+ AI+ F Q L+ +P   +A   RG A     
Sbjct: 24  VSQTTANPVKAVEF-YNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLG 82

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + E AI+D+T+A+  NP+   A   R        +   A++D +KA+    N AD    R
Sbjct: 83  QYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYR 142

Query: 490 GIVNFKFKDFNAAVEDLSACVKLD--KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           G           A+ED +  + L   +     +    LA +  G+ + A   + ++++++
Sbjct: 143 GNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESLKIN 202

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQ 575
            NF EA+ +    +  L N EKA+  L+
Sbjct: 203 ANFAEAYHNRGLTHYKLGNREKAIADLE 230



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 2/218 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS       +NP     +  RG  R   G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 20  ISPLVSQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A            +Y+ A E   KAI L+ NF + +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   + ++ R L  +  GQ + A++D +  L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESL 199

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            I+ +  E  + R   ++ +G   +AI D +AA  L L
Sbjct: 200 KINANFAEAYHNRGLTHYKLGNREKAIADLEAAARLAL 237



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 93/188 (49%), Gaps = 2/188 (1%)

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           P  A   + RG+      D++ A+ D +  ++L+ ++  AY   G A   +G+Y++A   
Sbjct: 31  PVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIAD 90

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
           + +A+ ++ N++ A G+    +      E A+E   + + ++  F+  +  RG     LG
Sbjct: 91  YTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLG 150

Query: 600 QHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           +H +AI+D +  L +  +  +    Y RA  Y+  G+   A++DY+ +L +  +  E + 
Sbjct: 151 RHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESLKINANFAEAYH 210

Query: 658 LQCLAFYQ 665
            + L  Y+
Sbjct: 211 NRGLTHYK 218



 Score = 42.0 bits (97), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + G++  AI  + + L       +  I    A A+ R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYN 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL  A
Sbjct: 197 ESLKINANFAEAYHNRGLTHYKLGNREKAIADLEAA 232


>gi|186683665|ref|YP_001866861.1| hypothetical protein Npun_R3512 [Nostoc punctiforme PCC 73102]
 gi|186466117|gb|ACC81918.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 535

 Score =  100 bits (248), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 129/263 (49%), Gaps = 7/263 (2%)

Query: 394 EGKYASAISIFDQILKEDPMYPEA-----LIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           E K    I I D + ++D   PE+     L+ +G      +E EAAI+ + +A++  P  
Sbjct: 200 EQKIEKVIEIQDLLTEKDQ--PESRKAGLLVEQGNLLDAAKEYEAAITSYNQALKFQPDY 257

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +AW  +G+A   LG   EA+    +AL+F+P+   +L+ +GI  +  + +  A+   + 
Sbjct: 258 YQAWNNQGKALRNLGRYEEALASFEQALKFQPDDYIVLNNKGIELWNLRRYEEALASYNE 317

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            V++  ++  A+   G+ L  +  Y++A  ++ +A+Q+  ++ EAW +       L   E
Sbjct: 318 AVQIKPDDPQAWYNRGITLWDLERYEEALASYNEAVQIKPDYQEAWHNQGNTLGKLERYE 377

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +AL    + + I     +A+H +G  L  LG  ++A+   +  L I P   +  Y R   
Sbjct: 378 EALASYVRTVTIQPDKHEAWHGKGFALGQLGCDEEALTAFNEALKIKPDYHQAWYNRGHA 437

Query: 629 YHAIGEYREAIKDYDAALDLELD 651
              +G   EAI  YD AL ++ D
Sbjct: 438 LSNLGRNEEAIASYDQALKIKPD 460



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 10/289 (3%)

Query: 340 DSTESRSKLSFKWDMLKETSN--EAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNE 394
           D  ESR     K  +L E  N  +A +  +  +T  +++     D+  +   +G A  N 
Sbjct: 217 DQPESR-----KAGLLVEQGNLLDAAKEYEAAITSYNQALKFQPDYYQAWNNQGKALRNL 271

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A++ F+Q LK  P     L  +G      R  E A++ + EA+Q  P   +AW  
Sbjct: 272 GRYEEALASFEQALKFQPDDYIVLNNKGIELWNLRRYEEALASYNEAVQIKPDDPQAWYN 331

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG     L    EA+   ++A++ +P+  +  H +G    K + +  A+      V +  
Sbjct: 332 RGITLWDLERYEEALASYNEAVQIKPDYQEAWHNQGNTLGKLERYEEALASYVRTVTIQP 391

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+   G AL  +G  ++A  A  +A+++  ++ +AW +      +L  +E+A+   
Sbjct: 392 DKHEAWHGKGFALGQLGCDEEALTAFNEALKIKPDYHQAWYNRGHALSNLGRNEEAIASY 451

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            Q L I   +  A++ +G  L  LG+ K+  K ++  + I+P  ++ ++
Sbjct: 452 DQALKIKPDYHYAWYYKGAALIKLGRWKEGNKSINKAIEINPDFVKNIF 500


>gi|443646836|ref|ZP_21129514.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           DIANCHI905]
 gi|443335665|gb|ELS50129.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           DIANCHI905]
          Length = 260

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 10/207 (4%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL   PN  + L  R  V++  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           G + +A E + KA+ L      DR F     +    Y      E AL    + L I+  F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           ++AYH RGL  + LG  +KAI DL + 
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADLEAA 232



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 2/192 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++  G Y+ AI+ F Q L+ +P   +A   RG A     + E AI+D+T+A+  N
Sbjct: 39  NRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQALTIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   R        +   A++D +KA+    N AD    RG           A+ED
Sbjct: 99  PNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGRHLEAIED 158

Query: 506 LSACVKLD--KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +  + L   +     +    LA +  G+ + A   + ++++++ NF EA+ +    Y  
Sbjct: 159 YTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESLKINANFAEAYHNRGLTYYK 218

Query: 564 LANSEKALECLQ 575
           L N EKA+  L+
Sbjct: 219 LGNREKAIADLE 230



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 2/218 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  +    +NP     +  RG  R   G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A            +Y+ A E   KAI L+ NF + +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   + ++ R L  +  GQ + A++D +  L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESL 199

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            I+ +  E  + R   Y+ +G   +AI D +AA  L L
Sbjct: 200 KINANFAEAYHNRGLTYYKLGNREKAIADLEAAARLAL 237



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 97/199 (48%), Gaps = 2/199 (1%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  LS      P  A   + RG+      D++ A+ D +  ++L+ ++  AY   G A  
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+Y++A   + +A+ ++ N++ A G+    +      E A+E   + + ++  F+  +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREAIKDYDAAL 646
             RG     LG+H +AI+D +  L +  +  +    Y RA  Y+  G+   A++DY+ +L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESL 199

Query: 647 DLELDSMEKFVLQCLAFYQ 665
            +  +  E +  + L +Y+
Sbjct: 200 KINANFAEAYHNRGLTYYK 218



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A++  G+Y  AI+ + Q L  +P Y  AL  R       ++ EAA+ D T+A
Sbjct: 69  DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG  +EAI+D +KAL  +       I + R +   +    
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D +  +K++     AY   GL    +G  +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225



 Score = 41.2 bits (95), Expect = 3.2,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + G++  AI  + + L       +  I    A A+ R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYN 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL  A
Sbjct: 197 ESLKINANFAEAYHNRGLTYYKLGNREKAIADLEAA 232


>gi|411120171|ref|ZP_11392547.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410710327|gb|EKQ67838.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 272

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 119/276 (43%), Gaps = 34/276 (12%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           ++  + I V F   +G+    +  Y +AI+ +D +L   P YP+A   RG A       E
Sbjct: 1   MADFREIEVVFLFQKGLYLNRQHDYVAAIASYDAVLNRQPDYPDAWYNRGNAFYRLGHYE 60

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI+ + +A++  P   EAW  RG A   L    EAI    +A++F+P+     + RGI 
Sbjct: 61  EAIASYDQALEYEPGFSEAWNNRGSALDDLQRYAEAIASYDQAIKFKPSYCWAWYNRGI- 119

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
                                            AL ++  Y++A +++ +AI+   ++  
Sbjct: 120 ---------------------------------ALRNLNRYEEAIDSYDRAIEFKPDYYW 146

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           AW +     + L   ++ +    + L     F +A+  RG  L+ LGQ + AI      L
Sbjct: 147 AWYNRALVLKQLGRLQQVVASYDKALEFKPDFEEAWTNRGNALYHLGQLEAAISSYDKAL 206

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            + P N   LY +A CY   G+Y  A +    A++L
Sbjct: 207 ELRPDNPNTLYNKACCYALQGKYELAFESLQRAVEL 242



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 80/181 (44%)

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
            L ++G+   +  D+ AA+    A +    +   A+   G A   +G Y++A  ++ +A+
Sbjct: 11  FLFQKGLYLNRQHDYVAAIASYDAVLNRQPDYPDAWYNRGNAFYRLGHYEEAIASYDQAL 70

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           + +  F EAW +      DL    +A+    Q +     +  A++ RG+ L  L ++++A
Sbjct: 71  EYEPGFSEAWNNRGSALDDLQRYAEAIASYDQAIKFKPSYCWAWYNRGIALRNLNRYEEA 130

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
           I      +   P      Y RA     +G  ++ +  YD AL+ + D  E +  +  A Y
Sbjct: 131 IDSYDRAIEFKPDYYWAWYNRALVLKQLGRLQQVVASYDKALEFKPDFEEAWTNRGNALY 190

Query: 665 Q 665
            
Sbjct: 191 H 191



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 7/177 (3%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GL L+   +Y  A  ++   +    ++ +AW +    +  L + E+A+    Q L  +  
Sbjct: 16  GLYLNRQHDYVAAIASYDAVLNRQPDYPDAWYNRGNAFYRLGHYEEAIASYDQALEYEPG 75

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           FS+A++ RG  L  L ++ +AI      +   PS     Y R      +  Y EAI  YD
Sbjct: 76  FSEAWNNRGSALDDLQRYAEAIASYDQAIKFKPSYCWAWYNRGIALRNLNRYEEAIDSYD 135

Query: 644 AALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            A++ + D          A+Y + + L    ++      +D   +  P F+E W  R
Sbjct: 136 RAIEFKPDYY-------WAWYNRALVLKQLGRLQQVVASYDKALEFKPDFEEAWTNR 185



 Score = 40.0 bits (92), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 45/96 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G+    ++ +D+ L+  P + EA   RG A     +LEAAIS + +A++  
Sbjct: 150 NRALVLKQLGRLQQVVASYDKALEFKPDFEEAWTNRGNALYHLGQLEAAISSYDKALELR 209

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           P        +    A  G+   A + L +A+E  P+
Sbjct: 210 PDNPNTLYNKACCYALQGKYELAFESLQRAVELNPH 245


>gi|166363119|ref|YP_001655392.1| hypothetical protein MAE_03780 [Microcystis aeruginosa NIES-843]
 gi|166085492|dbj|BAG00200.1| tetratricopeptide repeat protein [Microcystis aeruginosa NIES-843]
          Length = 1379

 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 152/309 (49%), Gaps = 7/309 (2%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            L RG     + KY  A++ + + L+ +P   EA +GRG+  + Q++ E A++D+++A++ 
Sbjct: 976  LGRGGIYSLQQKYELALADYSKALEINPNLAEAYLGRGSIYSLQQKYELALADYSKALEI 1035

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            NP+  EA+  RG       +   A+ D +KALE  PN A     RG + +  K +  A+ 
Sbjct: 1036 NPNLAEAYLGRGGIYLLQQKYELALADFNKALEINPNYAMAYFGRGELYYYQKKYELALA 1095

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            D +  + ++    +AY   G    +  +Y+ A     KAI+LD     A+ +    Y D 
Sbjct: 1096 DYNKAIDINPNYANAYNNRGSIYYNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQ 1155

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               E AL    + + +D + + AY  RG L +   +++ A+ D +  L I+P+  E    
Sbjct: 1156 QKYELALADFNKAIELDSKLAMAYSNRGNLYYLQQKYELALADYNKALDINPNLAEAYLG 1215

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY---QKEIAL--YT-ASKINS 678
            R   Y+   +   A+ D++ A+++  + +E +  +   +Y   + E+AL  Y  A KIN 
Sbjct: 1216 RGGIYYYQQKDELALADFNKAIEINPNLVEAYNNRGNLYYLQQKYELALSDYNKAIKINK 1275

Query: 679  EFCWFDIDG 687
               WF + G
Sbjct: 1276 N-AWFAMMG 1283



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 122/249 (48%)

Query: 400  AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
            A+S + + +  +P Y  A   RG     Q++ + A+SD+++AI  NP+  E +  RG   
Sbjct: 855  ALSDYTKAIDINPNYAVAYNNRGLLYFNQKKYDLALSDYSKAIDINPNYAETYNNRGNLY 914

Query: 460  AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              L +   A+ D SKA++  PN A   + RG++    + +  A+ D +  ++L++    A
Sbjct: 915  KDLQKYDLALSDYSKAIDINPNYAVAYNNRGLLYLLQQKYELALADWNKAIELNRNLALA 974

Query: 520  YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
            Y   G   S   +Y+ A   + KA++++ N  EA+      Y      E AL    + L 
Sbjct: 975  YLGRGGIYSLQQKYELALADYSKALEINPNLAEAYLGRGSIYSLQQKYELALADYSKALE 1034

Query: 580  IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
            I+   ++AY  RG +     +++ A+ D +  L I+P+     + R   Y+   +Y  A+
Sbjct: 1035 INPNLAEAYLGRGGIYLLQQKYELALADFNKALEINPNYAMAYFGRGELYYYQKKYELAL 1094

Query: 640  KDYDAALDL 648
             DY+ A+D+
Sbjct: 1095 ADYNKAIDI 1103



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 140/309 (45%), Gaps = 17/309 (5%)

Query: 366  KKFCVTRISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
            KK+ +     SK+I ++        +RG    N  KY  A+S + + +  +P   +A   
Sbjct: 736  KKYELALADYSKAIDINPNDAVAYYNRGNLYYNLQKYDLALSDYSKAIDINPNDAKAYYN 795

Query: 421  RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE------------SVEA 468
            RG   +  ++ + A+SD+++AI  NP+  E +  RG     L +             + A
Sbjct: 796  RGNLYSDLQKYDLALSDYSKAIDINPNYAETYNNRGNLYKDLQKYDLALSDYTKAIDILA 855

Query: 469  IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
            + D +KA++  PN A   + RG++ F  K ++ A+ D S  + ++      Y   G    
Sbjct: 856  LSDYTKAIDINPNYAVAYNNRGLLYFNQKKYDLALSDYSKAIDINPNYAETYNNRGNLYK 915

Query: 529  SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
             + +Y  A   + KAI ++ N+  A+ +    Y      E AL    + + +++  + AY
Sbjct: 916  DLQKYDLALSDYSKAIDINPNYAVAYNNRGLLYLLQQKYELALADWNKAIELNRNLALAY 975

Query: 589  HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              RG +     +++ A+ D S  L I+P+  E    R S Y    +Y  A+ DY  AL++
Sbjct: 976  LGRGGIYSLQQKYELALADYSKALEINPNLAEAYLGRGSIYSLQQKYELALADYSKALEI 1035

Query: 649  ELDSMEKFV 657
              +  E ++
Sbjct: 1036 NPNLAEAYL 1044



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 22/263 (8%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    N  KY  A+S +++ +K +P Y  A   RG   + Q++ E A++D+++AI  N
Sbjct: 693 NRGNLYYNLQKYDLALSDWNKAIKINPNYANAYNNRGNLYSDQKKYELALADYSKAIDIN 752

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG     L +   A+ D SKA++  PN A   + RG +    + ++ A+ D
Sbjct: 753 PNDAVAYYNRGNLYYNLQKYDLALSDYSKAIDINPNDAKAYYNRGNLYSDLQKYDLALSD 812

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  + ++      Y   G     + +Y  A   + KAI +                 L+
Sbjct: 813 YSKAIDINPNYAETYNNRGNLYKDLQKYDLALSDYTKAIDI---------------LALS 857

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +  KA++       I+  ++ AY+ RGLL     ++  A+ D S  + I+P+  E    R
Sbjct: 858 DYTKAID-------INPNYAVAYNNRGLLYFNQKKYDLALSDYSKAIDINPNYAETYNNR 910

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
            + Y  + +Y  A+ DY  A+D+
Sbjct: 911 GNLYKDLQKYDLALSDYSKAIDI 933



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 154/348 (44%), Gaps = 44/348 (12%)

Query: 366  KKFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
            KK+ +     SK+I ++   +     RG    +  KY  A+S + + +  +P Y  A   
Sbjct: 884  KKYDLALSDYSKAIDINPNYAETYNNRGNLYKDLQKYDLALSDYSKAIDINPNYAVAYNN 943

Query: 421  RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
            RG     Q++ E A++D+ +AI+ N +   A+  RG   +   +   A+ D SKALE  P
Sbjct: 944  RGLLYLLQQKYELALADWNKAIELNRNLALAYLGRGGIYSLQQKYELALADYSKALEINP 1003

Query: 481  NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            N A+    RG +    + +  A+ D S  ++++     AY   G       +Y+ A    
Sbjct: 1004 NLAEAYLGRGSIYSLQQKYELALADYSKALEINPNLAEAYLGRGGIYLLQQKYELALADF 1063

Query: 541  LKAIQLDRNFLEAW---GHLTQFYQD-----LANSEKALECL------------------ 574
             KA++++ N+  A+   G L  +YQ      LA+  KA++                    
Sbjct: 1064 NKALEINPNYAMAYFGRGELY-YYQKKYELALADYNKAIDINPNYANAYNNRGSIYYNQQ 1122

Query: 575  ---------QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
                      + + +D + + AY  RG + +   +++ A+ D +  + +D         R
Sbjct: 1123 KYELALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELALADFNKAIELDSKLAMAYSNR 1182

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ-CLAFYQK--EIAL 670
             + Y+   +Y  A+ DY+ ALD+  +  E ++ +  + +YQ+  E+AL
Sbjct: 1183 GNLYYLQQKYELALADYNKALDINPNLAEAYLGRGGIYYYQQKDELAL 1230



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 5/224 (2%)

Query: 376  SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            +K+I +D +L+     RG    ++ KY  A++ F++ ++ D     A   RG     Q++
Sbjct: 1132 NKAIELDSKLAMAYSNRGNIYNDQQKYELALADFNKAIELDSKLAMAYSNRGNLYYLQQK 1191

Query: 431  LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
             E A++D+ +A+  NP+  EA+  RG       +   A+ D +KA+E  PN  +  + RG
Sbjct: 1192 YELALADYNKALDINPNLAEAYLGRGGIYYYQQKDELALADFNKAIEINPNLVEAYNNRG 1251

Query: 491  IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
             + +  + +  A+ D +  +K++K    A   +GL     G   +A +   KA+ ++   
Sbjct: 1252 NLYYLQQKYELALSDYNKAIKINKNAWFAMMGIGLVKYEQGSISEAIKQWEKALIINNQS 1311

Query: 551  LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
             E    L   +      +KAL+  +  L I+ + +    L+ +L
Sbjct: 1312 AEIQLALAVAFYHQGEKDKALKLAESALSINSQLANIDFLKKIL 1355



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 132/298 (44%), Gaps = 34/298 (11%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            L RG   + + KY  A++ F++ L+ +P Y  A  GRG    +Q++ E A++D+ +AI  
Sbjct: 1044 LGRGGIYLLQQKYELALADFNKALEINPNYAMAYFGRGELYYYQKKYELALADYNKAIDI 1103

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            NP+   A+  RG       +   A+ D +KA+E +   A     RG +    + +  A+ 
Sbjct: 1104 NPNYANAYNNRGSIYYNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELALA 1163

Query: 505  DLSACVKLDKENKSAYTYLG----------LALS--------------------SIGEYK 534
            D +  ++LD +   AY+  G          LAL+                     I  Y+
Sbjct: 1164 DFNKAIELDSKLAMAYSNRGNLYYLQQKYELALADYNKALDINPNLAEAYLGRGGIYYYQ 1223

Query: 535  KAEEAHL----KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
            + +E  L    KAI+++ N +EA+ +    Y      E AL    + + I+K    A   
Sbjct: 1224 QKDELALADFNKAIEINPNLVEAYNNRGNLYYLQQKYELALSDYNKAIKINKNAWFAMMG 1283

Query: 591  RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             GL+ +  G   +AIK     L I+  + E     A  ++  GE  +A+K  ++AL +
Sbjct: 1284 IGLVKYEQGSISEAIKQWEKALIINNQSAEIQLALAVAFYHQGEKDKALKLAESALSI 1341



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 46/269 (17%)

Query: 432 EAAISDFTEAIQSN--PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD----- 484
           E AI  F EAI+ N   +   AW  +G A   LG+   AI+ L +A+   P   D     
Sbjct: 561 EEAIKAFDEAIKQNDPKNVYLAWYGKGLALGYLGKYQTAIEALQQAINTLPKREDLKNFH 620

Query: 485 --ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
             IL ++ +V    +++  A+  ++  + L   N + Y    + LS +  Y +   A  +
Sbjct: 621 SSILQKQSVVYRYLENYEQALTVINQAISLFPNNPNHYNEKYVVLSQLKRYDEGLAAITQ 680

Query: 543 AIQLDRNFLEAW-GHLTQFYQDLANSEKALECLQQV----------------LYIDKR-- 583
           AI L      AW G+    Y +L   + AL    +                 LY D++  
Sbjct: 681 AIDLAPR--AAWYGNRGNLYYNLQKYDLALSDWNKAIKINPNYANAYNNRGNLYSDQKKY 738

Query: 584 ------FSKA----------YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
                 +SKA          Y+ RG L + L ++  A+ D S  + I+P++ +  Y R +
Sbjct: 739 ELALADYSKAIDINPNDAVAYYNRGNLYYNLQKYDLALSDYSKAIDINPNDAKAYYNRGN 798

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKF 656
            Y  + +Y  A+ DY  A+D+  +  E +
Sbjct: 799 LYSDLQKYDLALSDYSKAIDINPNYAETY 827



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 6/85 (7%)

Query: 47   CSLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
             +L +W+KAI  L+  LA +Y       R   YS  + ++  + D  KAL+++P L +AY
Sbjct: 956  LALADWNKAIE-LNRNLALAY-----LGRGGIYSLQQKYELALADYSKALEINPNLAEAY 1009

Query: 107  ILKGCAFSALGRKEEALSVWEKGYE 131
            + +G  +S   + E AL+ + K  E
Sbjct: 1010 LGRGSIYSLQQKYELALADYSKALE 1034



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 11/126 (8%)

Query: 11   YRLNKTHKTICEIDELVRVDSVMASAITARIELAK-----LCSLRNWSKAIRILDSLLAQ 65
            Y   K    + + ++ + +DS +A A + R  +         +L +++KAI  LDS LA 
Sbjct: 1119 YNQQKYELALADWNKAIELDSKLAMAYSNRGNIYNDQQKYELALADFNKAIE-LDSKLAM 1177

Query: 66   SYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSV 125
            +Y      NR   Y   + ++  + D +KAL ++P L +AY+ +G  +    + E AL+ 
Sbjct: 1178 AY-----SNRGNLYYLQQKYELALADYNKALDINPNLAEAYLGRGGIYYYQQKDELALAD 1232

Query: 126  WEKGYE 131
            + K  E
Sbjct: 1233 FNKAIE 1238


>gi|398824104|ref|ZP_10582449.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. YR681]
 gi|398225243|gb|EJN11520.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. YR681]
          Length = 461

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 11/293 (3%)

Query: 331 SSISDNKSSDSTESRSKLSFKWDMLKETSN---EAKRNKKFCVTRISKSKSISVDFRLSR 387
           S+I D  ++ S++  + L  + D     S    +A R+    +T   K+      +RL  
Sbjct: 57  SAIVDQTANPSSDRAAALLVRADASARISGGLTQALRDIDRAITLDGKNAKA---WRLRG 113

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            + +   G    A +   + ++ D    EA   RG     QR LE A++D+  AI+  P 
Sbjct: 114 DLLREAGGDLGRAAADLSKAIELDAEDAEAYELRGVVYTNQRRLERALADYDRAIKLKPD 173

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +AW  RG      G++ +AI+DLS+AL  +PN A     RG    K    + +V D  
Sbjct: 174 YAQAWSDRGATYYLGGDNEKAIRDLSEALRLDPNRARSYTNRGAAYKKLGQLDKSVADDG 233

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQDLA 565
             ++LD +    Y   GL+L+++G+Y +A   + +A++L    NF    G   Q   +L 
Sbjct: 234 EAIRLDPKVPEYYDNRGLSLAAMGKYDEAIADYDQALRLAPKPNFFTNRGDSYQLKGELG 293

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
               AL   +  L +D  F++ Y+ R +L   +G+ +KA+ D  + L +DP N
Sbjct: 294 ---AALGDYESALKLDPNFAQTYNNRAVLYKKMGERRKALADYETALKLDPGN 343



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 1/187 (0%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           G   +A++D+ +A+  +  +A     RG ++     D   A  DLS  ++LD E+  AY 
Sbjct: 86  GGLTQALRDIDRAITLDGKNAKAWRLRGDLLREAGGDLGRAAADLSKAIELDAEDAEAYE 145

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G+  ++    ++A   + +AI+L  ++ +AW      Y    ++EKA+  L + L +D
Sbjct: 146 LRGVVYTNQRRLERALADYDRAIKLKPDYAQAWSDRGATYYLGGDNEKAIRDLSEALRLD 205

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
              +++Y  RG     LGQ  K++ D    + +DP   E    R     A+G+Y EAI D
Sbjct: 206 PNRARSYTNRGAAYKKLGQLDKSVADDGEAIRLDPKVPEYYDNRGLSLAAMGKYDEAIAD 265

Query: 642 YDAALDL 648
           YD AL L
Sbjct: 266 YDQALRL 272



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 90/194 (46%), Gaps = 7/194 (3%)

Query: 502 AVEDLSACVKLDKENKSAYTYLG-LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           A+ D+   + LD +N  A+   G L   + G+  +A     KAI+LD    EA+      
Sbjct: 91  ALRDIDRAITLDGKNAKAWRLRGDLLREAGGDLGRAAADLSKAIELDAEDAEAYELRGVV 150

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y +    E+AL    + + +   +++A+  RG   +  G ++KAI+DLS  L +DP+   
Sbjct: 151 YTNQRRLERALADYDRAIKLKPDYAQAWSDRGATYYLGGDNEKAIRDLSEALRLDPNRAR 210

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TAS 674
               R + Y  +G+  +++ D   A+ L+    E +      L  +  Y + IA Y  A 
Sbjct: 211 SYTNRGAAYKKLGQLDKSVADDGEAIRLDPKVPEYYDNRGLSLAAMGKYDEAIADYDQAL 270

Query: 675 KINSEFCWFDIDGD 688
           ++  +  +F   GD
Sbjct: 271 RLAPKPNFFTNRGD 284



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 13/140 (9%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G+   +++   + ++ DP  PE    RG + A   + + AI+D+ +A++  
Sbjct: 214 NRGAAYKKLGQLDKSVADDGEAIRLDPKVPEYYDNRGLSLAAMGKYDEAIADYDQALRLA 273

Query: 446 PSA------GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           P        G++++ +G+  AALG       D   AL+ +PN A   + R ++  K  + 
Sbjct: 274 PKPNFFTNRGDSYQLKGELGAALG-------DYESALKLDPNFAQTYNNRAVLYKKMGER 326

Query: 500 NAAVEDLSACVKLDKENKSA 519
             A+ D    +KLD  N +A
Sbjct: 327 RKALADYETALKLDPGNDNA 346



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%)

Query: 569 KALECLQQVLYIDKRFSKAYHLRG-LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +AL  + + + +D + +KA+ LRG LL    G   +A  DLS  + +D  + E   LR  
Sbjct: 90  QALRDIDRAITLDGKNAKAWRLRGDLLREAGGDLGRAAADLSKAIELDAEDAEAYELRGV 149

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            Y        A+ DYD A+ L+ D  + +  +   +Y
Sbjct: 150 VYTNQRRLERALADYDRAIKLKPDYAQAWSDRGATYY 186


>gi|164687574|ref|ZP_02211602.1| hypothetical protein CLOBAR_01215 [Clostridium bartlettii DSM
           16795]
 gi|164603348|gb|EDQ96813.1| tetratricopeptide repeat protein [Clostridium bartlettii DSM 16795]
          Length = 523

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 129/234 (55%), Gaps = 7/234 (2%)

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           E +  ++K +E   + AD  + RG    KF+ F +A++D    ++LDK  K AY   G+ 
Sbjct: 100 EKMAYVNKIIEKYDDCADGYYYRGDFYIKFEKFYSAIKDFEKVIQLDKNYKEAYRGKGVC 159

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
            S +G+   A + + KA+Q+D N+  A+ +L   Y +L   +KA+E  ++ L +D+    
Sbjct: 160 YSRLGDNDLAIKNYEKALQIDPNYEVAYYNLGVSYSNLKEYDKAMESYRKALELDENDVS 219

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RG +L  LG++K+A+KD ++ + ++  +   LY RA  ++ + +Y++A+ DY A +
Sbjct: 220 AYYNRGRILAYLGRYKEALKDFTNAINLEKYDERLLYERAGIFYLMKKYKDALLDYKAFV 279

Query: 647 DLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           +L     E ++     + Q        +++N+   +++   +IDP ++E +  R
Sbjct: 280 NLAPHMKEGYLGMADCYCQ-------MNQMNNAIEYYNKSIEIDPNYEESYFNR 326



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 144/308 (46%), Gaps = 3/308 (0%)

Query: 343 ESRSKLSFKWDMLKETSNEAKRNKKFC-VTRISKSKSISVDFRLSRGIAQVNEGKYASAI 401
           E   + +F  DML   + E + N+K   V +I +      D    RG   +   K+ SAI
Sbjct: 77  EDLERKTFIQDMLNHANMEFEINEKMAYVNKIIEKYDDCADGYYYRGDFYIKFEKFYSAI 136

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
             F+++++ D  Y EA  G+G   +   + + AI ++ +A+Q +P+   A+   G + + 
Sbjct: 137 KDFEKVIQLDKNYKEAYRGKGVCYSRLGDNDLAIKNYEKALQIDPNYEVAYYNLGVSYSN 196

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK-ENKSAY 520
           L E  +A++   KALE + N     + RG +      +  A++D +  + L+K + +  Y
Sbjct: 197 LKEYDKAMESYRKALELDENDVSAYYNRGRILAYLGRYKEALKDFTNAINLEKYDERLLY 256

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              G+    + +YK A   +   + L  +  E +  +   Y  +     A+E   + + I
Sbjct: 257 ERAGI-FYLMKKYKDALLDYKAFVNLAPHMKEGYLGMADCYCQMNQMNNAIEYYNKSIEI 315

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           D  + ++Y  R +        +KAIKDL   +G++P N E  Y RA  Y  I  + + I+
Sbjct: 316 DPNYEESYFNRSVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYYNRALAYGRIENHTKVIR 375

Query: 641 DYDAALDL 648
           D+  A+ +
Sbjct: 376 DFSKAIKM 383



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 110/247 (44%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  A+  +   +   P   E  +G         ++  AI  + ++I+ +P+  E++  R
Sbjct: 267 KYKDALLDYKAFVNLAPHMKEGYLGMADCYCQMNQMNNAIEYYNKSIEIDPNYEESYFNR 326

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
             A     +  +AI+DL K +   P + +  + R +   + ++    + D S  +K+  +
Sbjct: 327 SVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYYNRALAYGRIENHTKVIRDFSKAIKMGYK 386

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              +Y   G   S  G +KKA++ + ++I+   +    +        DL    +A+    
Sbjct: 387 VGKSYCNRGKEYSLTGNFKKAKDDYTRSIEHGYDSYIVYMGRGAANLDLEEYNEAILDFN 446

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + +D      Y+ RGL  + L Q+K+AI D S  +   PS+I     R   Y  IG+Y
Sbjct: 447 KAIELDNTKLGNYYYRGLAYYNLKQYKEAIDDFSVAIEGCPSDIRAYEKRGDAYCRIGDY 506

Query: 636 REAIKDY 642
             AIKD+
Sbjct: 507 DNAIKDF 513



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 24/243 (9%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           +AI DF + IQ + +  EA++ +G   + LG++  AI++  KAL+ +PN     +  G+ 
Sbjct: 134 SAIKDFEKVIQLDKNYKEAYRGKGVCYSRLGDNDLAIKNYEKALQIDPNYEVAYYNLGVS 193

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD----R 548
               K+++ A+E     ++LD+ + SAY   G  L+ +G YK+A +    AI L+    R
Sbjct: 194 YSNLKEYDKAMESYRKALELDENDVSAYYNRGRILAYLGRYKEALKDFTNAINLEKYDER 253

Query: 549 NFLEAWG--HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR-GLLLHG-----LGQ 600
              E  G  +L + Y+D     KA   L            A H++ G L        + Q
Sbjct: 254 LLYERAGIFYLMKKYKDALLDYKAFVNL------------APHMKEGYLGMADCYCQMNQ 301

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
              AI+  +  + IDP+  E  + R+  Y    + R+AIKD D  + L   + E +  + 
Sbjct: 302 MNNAIEYYNKSIEIDPNYEESYFNRSVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYYNRA 361

Query: 661 LAF 663
           LA+
Sbjct: 362 LAY 364



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 5/175 (2%)

Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +KSI +D        +R +A + +     AI   D+++  +P   EA   R  A      
Sbjct: 310 NKSIEIDPNYEESYFNRSVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYYNRALAYGRIEN 369

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
               I DF++AI+     G+++  RG+  +  G   +A  D ++++E   +S  +   RG
Sbjct: 370 HTKVIRDFSKAIKMGYKVGKSYCNRGKEYSLTGNFKKAKDDYTRSIEHGYDSYIVYMGRG 429

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
             N   +++N A+ D +  ++LD      Y Y GLA  ++ +YK+A +    AI+
Sbjct: 430 AANLDLEEYNEAILDFNKAIELDNTKLGNYYYRGLAYYNLKQYKEAIDDFSVAIE 484



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 34/232 (14%)

Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKET-------------SNEAKR 364
           +N  N   E Y+KS   D    +S  +RS    K D L++              + EA  
Sbjct: 299 MNQMNNAIEYYNKSIEIDPNYEESYFNRSVAYLKQDDLRKAIKDLDKVIGLNPKNGEAYY 358

Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
           N+     RI     +  DF              + AI +  ++ K       +   RG  
Sbjct: 359 NRALAYGRIENHTKVIRDF--------------SKAIKMGYKVGK-------SYCNRGKE 397

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
            +     + A  D+T +I+    +   +  RG A   L E  EAI D +KA+E +     
Sbjct: 398 YSLTGNFKKAKDDYTRSIEHGYDSYIVYMGRGAANLDLEEYNEAILDFNKAIELDNTKLG 457

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             + RG+  +  K +  A++D S  ++    +  AY   G A   IG+Y  A
Sbjct: 458 NYYYRGLAYYNLKQYKEAIDDFSVAIEGCPSDIRAYEKRGDAYCRIGDYDNA 509


>gi|119356061|ref|YP_910705.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
 gi|119353410|gb|ABL64281.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 308

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 115/261 (44%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI +   G  + A+  F++ L  DP    A   RG          AAI+D+T AI+ NP 
Sbjct: 34  GIVKGRSGDTSGALDDFNRALILDPKNSGAYYNRGLVNGQLGNFSAAIADYTSAIKLNPH 93

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
               +  RG A AA G    AI D+SKA+  +P   ++ + RG V    KD+  A+ED +
Sbjct: 94  FPGTYNNRGFAHAATGNYRAAIIDISKAIALDPLIPELYNNRGTVKMSLKDYIGAIEDFT 153

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
              +L+ +    +   GLA S  G    A E    A+  D+ +  AW +         + 
Sbjct: 154 KAARLNPKLAGPFNNRGLAKSLAGNIMGAIEDFTLALVRDQTYDAAWYNRGNARLSSGDF 213

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
             A+E  ++ L +     +AY+ R      LG ++ A+ D++  +     N    Y R  
Sbjct: 214 NGAIEDYKKALVLQPDLIEAYNNRAFAKASLGDYRGAVDDMNILIEKGTENAMTYYNRGL 273

Query: 628 CYHAIGEYREAIKDYDAALDL 648
               +G+   AI D+  A +L
Sbjct: 274 AKKMLGDLNGAIADFLKASNL 294



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 2/230 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+     G +++AI+ +   +K +P +P     RG A A      AAI D ++AI  +
Sbjct: 66  NRGLVNGQLGNFSAAIADYTSAIKLNPHFPGTYNNRGFAHAATGNYRAAIIDISKAIALD 125

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E +  RG  + +L + + AI+D +KA    P  A   + RG+      +   A+ED
Sbjct: 126 PLIPELYNNRGTVKMSLKDYIGAIEDFTKAARLNPKLAGPFNNRGLAKSLAGNIMGAIED 185

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +  D+   +A+   G A  S G++  A E + KA+ L  + +EA+ +       L 
Sbjct: 186 FTLALVRDQTYDAAWYNRGNARLSSGDFNGAIEDYKKALVLQPDLIEAYNNRAFAKASLG 245

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL--SSGLG 613
           +   A++ +  ++      +  Y+ RGL    LG    AI D   +S LG
Sbjct: 246 DYRGAVDDMNILIEKGTENAMTYYNRGLAKKMLGDLNGAIADFLKASNLG 295



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 63/255 (24%), Positives = 103/255 (40%), Gaps = 7/255 (2%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           PE  I  G  +    +   A+ DF  A+  +P    A+  RG     LG    AI D + 
Sbjct: 27  PEDFIELGIVKGRSGDTSGALDDFNRALILDPKNSGAYYNRGLVNGQLGNFSAAIADYTS 86

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A++  P+     + RG  +    ++ AA+ D+S  + LD      Y   G    S+ +Y 
Sbjct: 87  AIKLNPHFPGTYNNRGFAHAATGNYRAAIIDISKAIALDPLIPELYNNRGTVKMSLKDYI 146

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
            A E   KA +L+      + +         N   A+E     L  D+ +  A++ RG  
Sbjct: 147 GAIEDFTKAARLNPKLAGPFNNRGLAKSLAGNIMGAIEDFTLALVRDQTYDAAWYNRGNA 206

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
               G    AI+D    L + P  IE    RA    ++G+YR A+ D +  +       E
Sbjct: 207 RLSSGDFNGAIEDYKKALVLQPDLIEAYNNRAFAKASLGDYRGAVDDMNILI-------E 259

Query: 655 KFVLQCLAFYQKEIA 669
           K     + +Y + +A
Sbjct: 260 KGTENAMTYYNRGLA 274


>gi|443329565|ref|ZP_21058150.1| TPR repeat-containing protein [Xenococcus sp. PCC 7305]
 gi|442790903|gb|ELS00405.1| TPR repeat-containing protein [Xenococcus sp. PCC 7305]
          Length = 486

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 144/284 (50%), Gaps = 12/284 (4%)

Query: 374 SKSKSISVDFRLSRGIAQVNEGK-YASAISIFDQILKEDPMY-------PEALIGRGTAR 425
           S+++ I V+ R    I++ N GK Y + I +   + +   ++       P+  +  G  +
Sbjct: 182 SEARLIGVNGRF---ISEGNTGKVYGAGIPLEIYLAERGNLFISTNITLPQDFVSLGRRK 238

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
             Q++   AI++F  A+ SN +  ++   RG+A   L +   A +D    L+ +PN+ + 
Sbjct: 239 LKQKDYRGAIAEFNRALASNINDLDSLSGRGEAYLILKDYSMANKDFDAVLQRDPNNINA 298

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L  RG+     ++ + A+ D S  + ++ +   AY   G   +S  E+ KA   + + I+
Sbjct: 299 LLYRGVTYMISEEKDKAIIDFSQAISINPDFGLAYLLRGTIYASRKEFDKAIADYQEPIR 358

Query: 546 LDRNF-LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           L  +F + ++  L   + +L   +KA+    + +  + + ++ Y  RGL+ + L ++ KA
Sbjct: 359 LGSDFAVASYSFLGMLHMNLEEYDKAIGYYTEAISFNPKITEIYLSRGLIYYRLEEYNKA 418

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           I D + G+ +DPS+ +   LR   Y+ +G+ ++AI D+  A DL
Sbjct: 419 IADCTKGISVDPSSADAYVLRGLSYNDLGDEKKAIDDFQKAADL 462



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 10/126 (7%)

Query: 18  KTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQDI-CNRA 76
           K I +  E +R+ S  A A  + + +  + +L  + KAI      ++ + +I +I  +R 
Sbjct: 348 KAIADYQEPIRLGSDFAVASYSFLGMLHM-NLEEYDKAIGYYTEAISFNPKITEIYLSRG 406

Query: 77  FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQ 136
             Y +LE +   I DC K + +DP+   AY+L+G +++ LG +++A+  ++K        
Sbjct: 407 LIYYRLEEYNKAIADCTKGISVDPSSADAYVLRGLSYNDLGDEKKAIDDFQK-------- 458

Query: 137 SADLKQ 142
           +ADL Q
Sbjct: 459 AADLYQ 464



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 118/300 (39%), Gaps = 23/300 (7%)

Query: 231 GSSVPVSKSG---------LHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDF 281
           GS  P S  G         + +NG+   +SE + G   G+        A   N   S + 
Sbjct: 168 GSFTPGSSGGGIFDSEARLIGVNGRF--ISEGNTGKVYGAGIPLEIYLAERGNLFISTNI 225

Query: 282 DICNGPIDKASVNERHGRQTN---GTHDVHDKLSSDSASLNDSNTNSESYS--KSSISDN 336
            +   P D  S+  R  +Q +      + +  L+S+   L+  +   E+Y   K     N
Sbjct: 226 TL---PQDFVSLGRRKLKQKDYRGAIAEFNRALASNINDLDSLSGRGEAYLILKDYSMAN 282

Query: 337 KSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVN 393
           K  D+   R   +    + +  +      K   +   S++ SI+ DF L+   RG    +
Sbjct: 283 KDFDAVLQRDPNNINALLYRGVTYMISEEKDKAIIDFSQAISINPDFGLAYLLRGTIYAS 342

Query: 394 EGKYASAISIFDQILKEDPMYPEALIG-RGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
             ++  AI+ + + ++    +  A     G       E + AI  +TEAI  NP   E +
Sbjct: 343 RKEFDKAIADYQEPIRLGSDFAVASYSFLGMLHMNLEEYDKAIGYYTEAISFNPKITEIY 402

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             RG     L E  +AI D +K +  +P+SAD    RG+      D   A++D      L
Sbjct: 403 LSRGLIYYRLEEYNKAIADCTKGISVDPSSADAYVLRGLSYNDLGDEKKAIDDFQKAADL 462



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 7/103 (6%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+  +N  +Y  AI  + + +  +P   E  + RG       E   AI+D T+ I  +PS
Sbjct: 372 GMLHMNLEEYDKAIGYYTEAISFNPKITEIYLSRGLIYYRLEEYNKAIADCTKGISVDPS 431

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           + +A+  RG +   LG+  +AI D  KA       AD+  ++G
Sbjct: 432 SADAYVLRGLSYNDLGDEKKAIDDFQKA-------ADLYQKQG 467


>gi|425448155|ref|ZP_18828134.1| Mom72 protein [Microcystis aeruginosa PCC 9443]
 gi|389731136|emb|CCI04771.1| Mom72 protein [Microcystis aeruginosa PCC 9443]
          Length = 260

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 10/207 (4%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL   PN  + L  R  V++  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           G++ +A E + KA+ L      DR F     +    Y      E AL    + L I+  F
Sbjct: 150 GKHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           ++AYH RGL  + LG  +KAI DL + 
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEAA 232



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 2/192 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++  G Y+ AI+ F Q L+ +P   +A   RG A     + E AI+D+T+A+  N
Sbjct: 39  NRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQALTIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   R        +   A++D +KA+    N AD    RG           A+ED
Sbjct: 99  PNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGKHLEAIED 158

Query: 506 LSACVKLD--KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +  + L   +     +    LA +  G+ + A   + ++++++ NF EA+ +    +  
Sbjct: 159 YTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESLKINANFAEAYHNRGLTHYK 218

Query: 564 LANSEKALECLQ 575
           L N EKA+  L+
Sbjct: 219 LGNREKAIADLE 230



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 2/218 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  +    +NP     +  RG  R   G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A            +Y+ A E   KAI L+ NF + +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   + ++ R L  +  GQ + A++D +  L
Sbjct: 140 IYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESL 199

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            I+ +  E  + R   ++ +G   +AI D +AA  L L
Sbjct: 200 KINANFAEAYHNRGLTHYKLGNREKAIADLEAAARLAL 237



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 96/199 (48%), Gaps = 2/199 (1%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  LS      P  A   + RG+      D++ A+ D +  ++L+ ++  AY   G A  
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+Y++A   + +A+ ++ N++ A G+    +      E A+E   + + ++  F+  +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREAIKDYDAAL 646
             RG     LG+H +AI+D +  L +  +  +    Y RA  Y+  G+   A++DY+ +L
Sbjct: 140 IYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESL 199

Query: 647 DLELDSMEKFVLQCLAFYQ 665
            +  +  E +  + L  Y+
Sbjct: 200 KINANFAEAYHNRGLTHYK 218



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A++  G+Y  AI+ + Q L  +P Y  AL  R       ++ EAA+ D T+A
Sbjct: 69  DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG+ +EAI+D +KAL  +       I + R +   +    
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D +  +K++     AY   GL    +G  +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTHYKLGNREKA 225



 Score = 42.7 bits (99), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + GK+  AI  + + L       +  I    A A+ R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYN 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL  A
Sbjct: 197 ESLKINANFAEAYHNRGLTHYKLGNREKAIADLEAA 232


>gi|296125217|ref|YP_003632469.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296017033|gb|ADG70270.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 356

 Score = 99.8 bits (247), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 1/262 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+++     Y  AI  F++++  DP Y  A    G         + AI  +++A++ +
Sbjct: 43  NRGLSKSGLRMYEEAIRDFEKVISIDPNYVHAYNNIGLVNHNLGNYKEAIKYYSKALELD 102

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  + +   G A   LG   EAI++  KA+E  PN     +  G+V      +  A++D
Sbjct: 103 NNCIQVYNNIGLANHNLGNYEEAIKNYIKAIEISPN-VHTYNNIGLVKNDLGLYEDAIKD 161

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++LDK    AY  +GL+  ++  Y ++ E   KA++LD N    + ++     DL 
Sbjct: 162 FNKVLELDKNYFKAYYNIGLSKYNLKMYDESIEYFNKALELDNNSAYTYNNIGIVKHDLG 221

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++ALE   + L +D  +SK+Y+ RG+    L  + +A+ D    + ++P N    +  
Sbjct: 222 KYKEALEYFDKALELDNNYSKSYYNRGVSKVNLKLYDEAVNDFYKVIELEPQNFNAYFRL 281

Query: 626 ASCYHAIGEYREAIKDYDAALD 647
           A     +  Y EAI+ YD  +D
Sbjct: 282 AYVKLKLKMYEEAIEYYDKYID 303



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 127/255 (49%), Gaps = 1/255 (0%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y ++I  FD+++       E    RG +++  R  E AI DF + I  +P+   A+  
Sbjct: 18  GDYKNSIEYFDKLIFYYGDIAELYNNRGLSKSGLRMYEEAIRDFEKVISIDPNYVHAYNN 77

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            G     LG   EAI+  SKALE + N   + +  G+ N    ++  A+++    +++  
Sbjct: 78  IGLVNHNLGNYKEAIKYYSKALELDNNCIQVYNNIGLANHNLGNYEEAIKNYIKAIEI-S 136

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            N   Y  +GL  + +G Y+ A +   K ++LD+N+ +A+ ++     +L   ++++E  
Sbjct: 137 PNVHTYNNIGLVKNDLGLYEDAIKDFNKVLELDKNYFKAYYNIGLSKYNLKMYDESIEYF 196

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L +D   +  Y+  G++ H LG++K+A++     L +D +  +  Y R      +  
Sbjct: 197 NKALELDNNSAYTYNNIGIVKHDLGKYKEALEYFDKALELDNNYSKSYYNRGVSKVNLKL 256

Query: 635 YREAIKDYDAALDLE 649
           Y EA+ D+   ++LE
Sbjct: 257 YDEAVNDFYKVIELE 271



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 52  WSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
           +  +I   D L+    +I ++ N R    S L +++  IRD +K + +DP  + AY   G
Sbjct: 20  YKNSIEYFDKLIFYYGDIAELYNNRGLSKSGLRMYEEAIRDFEKVISIDPNYVHAYNNIG 79

Query: 111 CAFSALGRKEEALSVWEKGYE 131
                LG  +EA+  + K  E
Sbjct: 80  LVNHNLGNYKEAIKYYSKALE 100


>gi|428311393|ref|YP_007122370.1| hypothetical protein Mic7113_3225 [Microcoleus sp. PCC 7113]
 gi|428253005|gb|AFZ18964.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
          Length = 496

 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 137/290 (47%), Gaps = 26/290 (8%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+++  +G Y  AI+ + Q+L+ +P   EA   RG  RA   +   A+ D+ +A+Q + 
Sbjct: 104 RGMSRYKKGDYLGAINDYSQVLRVNPHNAEAYSERGFVRAVLADRWGAMQDYNQALQIDA 163

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              + +  R   R  L +  EAI D + AL   PN       RG+ +F+ +D+  A+ED 
Sbjct: 164 KHIKTYLNRIPLRVELADYQEAIADCNAALNINPNLPKAYLYRGMAHFELEDYPNAMEDY 223

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + ++      Y   GL    +G+Y++A     +A++L+ N+ +A+ +       L +
Sbjct: 224 NQALNINPNLAEGYFNRGLNRIGLGDYQEAIADFNQALKLNPNYTQAYLNRGYTRLQLGD 283

Query: 567 SEKALECLQQVLYIDKRFSKAYH---------------------LRGLLLHG-----LGQ 600
           +  +LE   Q L++D   +KA+                      ++GL+L G      G 
Sbjct: 284 NWGSLEDFDQALHLDPVSAKAFFSQMAPAFSQELGIVEDENQQLIQGLMLQGNLRYDSGD 343

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           +  A+   +  L +DP+  E    R++   A+ +Y  A++D + A +L L
Sbjct: 344 YHAALNAFNQVLNLDPNYTEAYNRRSTVRSALRDYEGALEDLETAKNLSL 393



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 137/298 (45%), Gaps = 26/298 (8%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             +G+ + + G Y  AI  F+Q L+ +  + E    RG +R  + +   AI+D+++ ++ 
Sbjct: 68  FKQGLNKFHRGDYRGAIQDFNQALRFNADFAEVYYYRGMSRYKKGDYLGAINDYSQVLRV 127

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   EA+  RG  RA L +   A+QD ++AL+ +         R  +  +  D+  A+ 
Sbjct: 128 NPHNAEAYSERGFVRAVLADRWGAMQDYNQALQIDAKHIKTYLNRIPLRVELADYQEAIA 187

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +A + ++     AY Y G+A   + +Y  A E + +A+ ++ N  E + +       L
Sbjct: 188 DCNAALNINPNLPKAYLYRGMAHFELEDYPNAMEDYNQALNINPNLAEGYFNRGLNRIGL 247

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN------ 618
            + ++A+    Q L ++  +++AY  RG     LG +  +++D    L +DP +      
Sbjct: 248 GDYQEAIADFNQALKLNPNYTQAYLNRGYTRLQLGDNWGSLEDFDQALHLDPVSAKAFFS 307

Query: 619 --------------------IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
                               I+ L L+ +  +  G+Y  A+  ++  L+L+ +  E +
Sbjct: 308 QMAPAFSQELGIVEDENQQLIQGLMLQGNLRYDSGDYHAALNAFNQVLNLDPNYTEAY 365



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 110/210 (52%), Gaps = 1/210 (0%)

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           A E++K+ G  +   G+   AIQD ++AL F  + A++ + RG+  +K  D+  A+ D S
Sbjct: 64  ASESFKQ-GLNKFHRGDYRGAIQDFNQALRFNADFAEVYYYRGMSRYKKGDYLGAINDYS 122

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++++  N  AY+  G   + + +   A + + +A+Q+D   ++ + +      +LA+ 
Sbjct: 123 QVLRVNPHNAEAYSERGFVRAVLADRWGAMQDYNQALQIDAKHIKTYLNRIPLRVELADY 182

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+      L I+    KAY  RG+    L  +  A++D +  L I+P+  E  + R  
Sbjct: 183 QEAIADCNAALNINPNLPKAYLYRGMAHFELEDYPNAMEDYNQALNINPNLAEGYFNRGL 242

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFV 657
               +G+Y+EAI D++ AL L  +  + ++
Sbjct: 243 NRIGLGDYQEAIADFNQALKLNPNYTQAYL 272



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 128/294 (43%), Gaps = 25/294 (8%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+R   +V    Y  AI+  +  L  +P  P+A + RG A     +   A+ D+ +A+  
Sbjct: 170 LNRIPLRVELADYQEAIADCNAALNINPNLPKAYLYRGMAHFELEDYPNAMEDYNQALNI 229

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+  E +  RG  R  LG+  EAI D ++AL+  PN       RG    +  D   ++E
Sbjct: 230 NPNLAEGYFNRGLNRIGLGDYQEAIADFNQALKLNPNYTQAYLNRGYTRLQLGDNWGSLE 289

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    + LD  +  A+ +  +A +   E    E+ + + IQ     L   G+L     D 
Sbjct: 290 DFDQALHLDPVSAKAF-FSQMAPAFSQELGIVEDENQQLIQ----GLMLQGNLR---YDS 341

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID--------- 615
            +   AL    QVL +D  +++AY+ R  +   L  ++ A++DL +   +          
Sbjct: 342 GDYHAALNAFNQVLNLDPNYTEAYNRRSTVRSALRDYEGALEDLETAKNLSLSHQPSLQP 401

Query: 616 PSNIECLYLRASCYH------AIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           P  +         YH       IG+++ AI D++    L+++  +   L C  F
Sbjct: 402 PPVVPVGQTAKDYYHQGVEKLQIGDFQGAIADFNQV--LQMNGNDATTLTCRGF 453


>gi|425463465|ref|ZP_18842804.1| hypothetical protein MICAH_230001 [Microcystis aeruginosa PCC 9809]
 gi|389832747|emb|CCI23369.1| hypothetical protein MICAH_230001 [Microcystis aeruginosa PCC 9809]
          Length = 308

 Score = 99.4 bits (246), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 55/174 (31%), Positives = 96/174 (55%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG+A    GKY  A++ + Q+++ +P Y +A   RG A    +E + AI+D+T+A
Sbjct: 3   DAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQA 62

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +  +P+  +A+  RG     LGES +AI D ++AL  +PN  D    RGIV+ +  +   
Sbjct: 63  LSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQ 122

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
           A+ D +  ++L+ +   AY   G     + +Y+KA   + +AI+L+ N  +  G
Sbjct: 123 AIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKALTDYEQAIRLNPNLKQVIG 176



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 5/207 (2%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           +A   RG A     + + A++D+T+ I+ NP+  +A+  RG A   L ES +AI D ++A
Sbjct: 3   DAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQA 62

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L  +PN  D    RGIV+ +  +   A+ D +  + LD     AY   G+  + +GE ++
Sbjct: 63  LSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQ 122

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR---- 591
           A   + +AI+L+    +A+      Y  L   +KAL   +Q + ++    +    R    
Sbjct: 123 AIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKALTDYEQAIRLNPNLKQVIGSRLPSR 182

Query: 592 -GLLLHGLGQHKKAIKDLSSGLGIDPS 617
             L  +G G +K      SS L I PS
Sbjct: 183 LPLPKNGYGVYKFNRGATSSTLKIIPS 209



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 86/166 (51%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           AD    RG+   +   +  A+ D +  ++L+     AY   GLA + + E +KA   + +
Sbjct: 2   ADAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQ 61

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           A+ LD N ++A+ +    +  L  S++A+    Q L +D     AY  RG++ + LG+ +
Sbjct: 62  ALSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQ 121

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           +AI D +  + ++P   +    R   Y+ + +Y++A+ DY+ A+ L
Sbjct: 122 QAIADYTEAIRLNPKLADAYNKRGDTYYWLKKYQKALTDYEQAIRL 167



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 12/147 (8%)

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y  L   +KAL    QV+ ++  ++ AY  RGL  + L + +KAI D +  L +DP+ ++
Sbjct: 12  YGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQALSLDPNLVD 71

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-AS 674
             + R   ++ +GE ++AI DY  AL L+ + ++ +     V   L   Q+ IA YT A 
Sbjct: 72  AYFNRGIVHNRLGESQQAIADYTQALSLDPNLVDAYFNRGIVHNRLGESQQAIADYTEAI 131

Query: 675 KINSEFC-WFDIDGDIDPLFKEYWCKR 700
           ++N +    ++  GD       YW K+
Sbjct: 132 RLNPKLADAYNKRGD-----TYYWLKK 153



 Score = 43.5 bits (101), Expect = 0.57,   Method: Composition-based stats.
 Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 5/95 (5%)

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
           + AY  RGL    LG+++KA+ D +  + ++P+  +  + R   Y+ + E ++AI DY  
Sbjct: 2   ADAYFNRGLAYGQLGKYQKALADYTQVIRLNPNYADAYFNRGLAYNRLKESQKAIADYTQ 61

Query: 645 ALDLELDSMEKF-----VLQCLAFYQKEIALYTAS 674
           AL L+ + ++ +     V   L   Q+ IA YT +
Sbjct: 62  ALSLDPNLVDAYFNRGIVHNRLGESQQAIADYTQA 96



 Score = 41.6 bits (96), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 20/112 (17%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +L ++++ IR L+   A +Y      NR   Y++L+  +  I D  +AL LDP L+ AY 
Sbjct: 21  ALADYTQVIR-LNPNYADAY-----FNRGLAYNRLKESQKAIADYTQALSLDPNLVDAYF 74

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSV 159
            +G   + LG  ++A+              AD  Q L L+  L  A  +R +
Sbjct: 75  NRGIVHNRLGESQQAI--------------ADYTQALSLDPNLVDAYFNRGI 112


>gi|425434489|ref|ZP_18814958.1| Mom72 protein [Microcystis aeruginosa PCC 9432]
 gi|389676033|emb|CCH94905.1| Mom72 protein [Microcystis aeruginosa PCC 9432]
          Length = 260

 Score = 99.4 bits (246), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 10/204 (4%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL   PN  + L  R  V++  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           G + +A E + KA+ L      DR F     +    Y      E AL    + L I+  F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALSYNRAGQQEMALRDYNESLKINANF 205

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDL 608
           ++AYH RGL  + LG  +KAI DL
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADL 229



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 2/193 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++  G Y+ AI+ F Q L+ +P   +A   RG A     + E AI+D+T+A+  N
Sbjct: 39  NRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQALTIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   R        +   A++D +KA+    N AD    RG           A+ED
Sbjct: 99  PNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGRHLEAIED 158

Query: 506 LSACVKLDKENKSAYTYLGLALS--SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +  + L         +   ALS    G+ + A   + ++++++ NF EA+ +    Y  
Sbjct: 159 YTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYNESLKINANFAEAYHNRGLTYYK 218

Query: 564 LANSEKALECLQQ 576
           L N EKA+  L++
Sbjct: 219 LGNREKAIADLEE 231



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 97/199 (48%), Gaps = 2/199 (1%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  LS      P  A   + RG+      D++ A+ D +  ++L+ ++  AY   G A  
Sbjct: 20  ISPLSAQTTPNPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+Y++A   + +A+ ++ N++ A G+    +      E A+E   + + ++  F+  +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREAIKDYDAAL 646
             RG     LG+H +AI+D +  L +  +  +    Y RA  Y+  G+   A++DY+ +L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYNESL 199

Query: 647 DLELDSMEKFVLQCLAFYQ 665
            +  +  E +  + L +Y+
Sbjct: 200 KINANFAEAYHNRGLTYYK 218



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 2/218 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  +     NP     +  RG  R   G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 20  ISPLSAQTTPNPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A            +Y+ A E   KAI L+ NF + +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   + ++ R L  +  GQ + A++D +  L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYNESL 199

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            I+ +  E  + R   Y+ +G   +AI D + A  L L
Sbjct: 200 KINANFAEAYHNRGLTYYKLGNREKAIADLEEAARLAL 237



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A++  G+Y  AI+ + Q L  +P Y  AL  R       ++ EAA+ D T+A
Sbjct: 69  DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG  +EAI+D +KAL  +       I + R +   +    
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQ 188

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D +  +K++     AY   GL    +G  +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225



 Score = 40.8 bits (94), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + G++  AI  + + L       +  I    A ++ R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYN 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL +A
Sbjct: 197 ESLKINANFAEAYHNRGLTYYKLGNREKAIADLEEA 232


>gi|428297688|ref|YP_007135994.1| hypothetical protein Cal6303_0957 [Calothrix sp. PCC 6303]
 gi|428234232|gb|AFZ00022.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 331

 Score = 99.4 bits (246), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 69/275 (25%), Positives = 131/275 (47%), Gaps = 8/275 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF L +G  +  +  +  A++ + + +K DP Y  A   RG  R    + + A++D+ +A
Sbjct: 17  DF-LIKGNEKYEKKDFRGALADYSEAIKLDPNYANAYGNRGATRKELGDKQGALADYNQA 75

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP+   A+  RG  R  LG+   A+ D ++A++  PN A   + RG   ++  D   
Sbjct: 76  IKINPNYANAYGNRGATRDELGDKQGALADYNQAIKINPNDAIAYNRRGYFRYELGDKQG 135

Query: 502 AVEDLSACVKLDKENKSAYTY-------LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           A+ DL+  + ++     AY         LG    +I +  +A   + +AI+++ N  + +
Sbjct: 136 AIADLNQAIIINPNYADAYNSRGYVRYELGDKQGAIDDLNQALADYNQAIKINPNDAQVY 195

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                    L + + A++ L Q + I+ ++  A    GL+ +  G  + AIK     + I
Sbjct: 196 SGRGYARYRLGDKQGAIDDLNQAIKINPKYRDAIIFIGLIKYEDGDRETAIKQWQEAITI 255

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           DP + E L   ++  H  G+ ++A+     AL L+
Sbjct: 256 DPKSAEPLLALSTALHKKGQRQQAVNMAKQALTLD 290



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 124/261 (47%), Gaps = 7/261 (2%)

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
           + P+  + +G  +  +++   A++D++EAI+ +P+   A+  RG  R  LG+   A+ D 
Sbjct: 13  LKPDDFLIKGNEKYEKKDFRGALADYSEAIKLDPNYANAYGNRGATRKELGDKQGALADY 72

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           ++A++  PN A+    RG    +  D   A+ D +  +K++  +  AY   G     +G+
Sbjct: 73  NQAIKINPNYANAYGNRGATRDELGDKQGALADYNQAIKINPNDAIAYNRRGYFRYELGD 132

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY-------IDKRFS 585
            + A     +AI ++ N+ +A+        +L + + A++ L Q L        I+   +
Sbjct: 133 KQGAIADLNQAIIINPNYADAYNSRGYVRYELGDKQGAIDDLNQALADYNQAIKINPNDA 192

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           + Y  RG   + LG  + AI DL+  + I+P   + +       +  G+   AIK +  A
Sbjct: 193 QVYSGRGYARYRLGDKQGAIDDLNQAIKINPKYRDAIIFIGLIKYEDGDRETAIKQWQEA 252

Query: 646 LDLELDSMEKFVLQCLAFYQK 666
           + ++  S E  +    A ++K
Sbjct: 253 ITIDPKSAEPLLALSTALHKK 273


>gi|427706884|ref|YP_007049261.1| hypothetical protein Nos7107_1468 [Nostoc sp. PCC 7107]
 gi|427359389|gb|AFY42111.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 1333

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 118/271 (43%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+ Q   G  ASAI+ +D+ ++  P   E    RG           A++ +  AI   P
Sbjct: 436 QGLQQAKTGDLASAIASYDRAIELQPESYEYWFNRGLTLFHLERFAEAVAAYDTAIDLKP 495

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG     LG   EAI   S+A+E  PN  +    + +   K      A+   
Sbjct: 496 DHYKAWYNRGGTLGELGLFAEAIASFSQAIEIHPNYPEAWASKALALLKLGQVWEAITSY 555

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L  ++   + Y G+A +   +Y +A  ++ +A++L  ++ E W        +L  
Sbjct: 556 DQALELQPQDPETWYYRGIAFAVSEQYTEAIASYNQALELQPDYYEVWIDRGVVLFNLKQ 615

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+    + L     F  A++ RG+ L  L + ++AI      + I P      Y +A
Sbjct: 616 WSEAIASWDKALAAQPDFYLAWYNRGVALDNLVRREEAIASYQKAIAIKPDFHLPWYNQA 675

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                +  Y EAI  YD AL ++LD  E ++
Sbjct: 676 VALFYLERYTEAIVAYDNALQIKLDYWEAWI 706



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 101/240 (42%), Gaps = 19/240 (7%)

Query: 443 QSNPSA------------GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           Q+NPS              +AW  +G  +A  G+   AI    +A+E +P S +    RG
Sbjct: 412 QANPSPTTTTNPANTAIQAQAWFYQGLQQAKTGDLASAIASYDRAIELQPESYEYWFNRG 471

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +  F  + F  AV      + L  ++  A+   G  L  +G + +A  +  +AI++  N+
Sbjct: 472 LTLFHLERFAEAVAAYDTAIDLKPDHYKAWYNRGGTLGELGLFAEAIASFSQAIEIHPNY 531

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            EAW         L    +A+    Q L +  +  + ++ RG+      Q+ +AI   + 
Sbjct: 532 PEAWASKALALLKLGQVWEAITSYDQALELQPQDPETWYYRGIAFAVSEQYTEAIASYNQ 591

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
            L + P   E    R      + ++ EAI  +D AL  + D         LA+Y + +AL
Sbjct: 592 ALELQPDYYEVWIDRGVVLFNLKQWSEAIASWDKALAAQPDFY-------LAWYNRGVAL 644



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 4/200 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G +A AI+ F Q ++  P YPEA   +  A     ++  AI+ + +A++  P   E W  
Sbjct: 512 GLFAEAIASFSQAIEIHPNYPEAWASKALALLKLGQVWEAITSYDQALELQPQDPETWYY 571

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A A   +  EAI   ++ALE +P+  ++  +RG+V F  K ++ A+      +    
Sbjct: 572 RGIAFAVSEQYTEAIASYNQALELQPDYYEVWIDRGVVLFNLKQWSEAIASWDKALAAQP 631

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
           +   A+   G+AL ++   ++A  ++ KAI +  +F   W +  +  FY  L    +A+ 
Sbjct: 632 DFYLAWYNRGVALDNLVRREEAIASYQKAIAIKPDFHLPWYNQAVALFY--LERYTEAIV 689

Query: 573 CLQQVLYIDKRFSKAYHLRG 592
                L I   + +A+  RG
Sbjct: 690 AYDNALQIKLDYWEAWIGRG 709



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 75/169 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+ +A +  G+   AI+ +DQ L+  P  PE    RG A A   +   AI+ + +A++  
Sbjct: 537 SKALALLKLGQVWEAITSYDQALELQPQDPETWYYRGIAFAVSEQYTEAIASYNQALELQ 596

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E W  RG     L +  EAI    KAL  +P+     + RG+          A+  
Sbjct: 597 PDYYEVWIDRGVVLFNLKQWSEAIASWDKALAAQPDFYLAWYNRGVALDNLVRREEAIAS 656

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               + +  +    +    +AL  +  Y +A  A+  A+Q+  ++ EAW
Sbjct: 657 YQKAIAIKPDFHLPWYNQAVALFYLERYTEAIVAYDNALQIKLDYWEAW 705



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 67/151 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA     +Y  AI+ ++Q L+  P Y E  I RG      ++   AI+ + +A+ + P
Sbjct: 572 RGIAFAVSEQYTEAIASYNQALELQPDYYEVWIDRGVVLFNLKQWSEAIASWDKALAAQP 631

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  RG A   L    EAI    KA+  +P+     + + +  F  + +  A+   
Sbjct: 632 DFYLAWYNRGVALDNLVRREEAIASYQKAIAIKPDFHLPWYNQAVALFYLERYTEAIVAY 691

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
              +++  +   A+   G A+  + + +  E
Sbjct: 692 DNALQIKLDYWEAWIGRGTAIGHVPDTETLE 722


>gi|347756696|ref|YP_004864259.1| ankyrin repeat-containing protein [Candidatus Chloracidobacterium
           thermophilum B]
 gi|347589213|gb|AEP13742.1| Ankyrin repeat protein [Candidatus Chloracidobacterium thermophilum
           B]
          Length = 609

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 136/310 (43%), Gaps = 43/310 (13%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           ++ GKY  AI ++ Q ++    +PEA   RG A       E A  DF  AIQ  P+  +A
Sbjct: 45  LSAGKYEEAIQLYTQAIERKADFPEAYNWRGFAYRATGRREEARRDFDRAIQLRPNYAKA 104

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           ++ R      LG+  +A++D ++  + +P S   +  RG+  F  + ++ A+ D  A +K
Sbjct: 105 YELRALTLYELGQYADAVKDYTEVFKLDPKSQSNIGYRGLCYFGLEQYDEAIRDFDAAIK 164

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
                   + Y G A                                  Y+   +S++AL
Sbjct: 165 ASPREALWFVYRGRA----------------------------------YEAKRDSKRAL 190

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
              +Q L +D    +A   RG+ L+  GQ ++AI D    L  +P+N + L  R   +  
Sbjct: 191 SDYEQALLLDPNNVRARTARGVALYVQGQFERAIADFDVVLRTEPNNQDMLAYRGQAHIE 250

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ-KEIALYTASKINSEFCWFDIDGDID 690
           +  + +A+KD+D  + L+ ++   +V +  A YQ K+ AL  A         FD   ++D
Sbjct: 251 LKRFDQAVKDFDELVRLDPNNARGYVGRGFARYQVKDYALAKAD--------FDRALELD 302

Query: 691 PLFKEYWCKR 700
           P   + +C R
Sbjct: 303 PNTGKVFCYR 312



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 92/195 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+      +Y  AI  FD  +K  P      + RG A   +R+ + A+SD+ +A+  +P
Sbjct: 142 RGLCYFGLEQYDEAIRDFDAAIKASPREALWFVYRGRAYEAKRDSKRALSDYEQALLLDP 201

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   A   RG A    G+   AI D    L  EPN+ D+L  RG  + + K F+ AV+D 
Sbjct: 202 NNVRARTARGVALYVQGQFERAIADFDVVLRTEPNNQDMLAYRGQAHIELKRFDQAVKDF 261

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              V+LD  N   Y   G A   + +Y  A+    +A++LD N  + + +    ++++  
Sbjct: 262 DELVRLDPNNARGYVGRGFARYQVKDYALAKADFDRALELDPNTGKVFCYRAMTHREMGQ 321

Query: 567 SEKALECLQQVLYID 581
            E A    +Q   +D
Sbjct: 322 LEAADADFRQCFTLD 336



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 3/172 (1%)

Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQIL 408
           W + +  + EAKR+ K  ++   ++  +   +V  R +RG+A   +G++  AI+ FD +L
Sbjct: 172 WFVYRGRAYEAKRDSKRALSDYEQALLLDPNNVRARTARGVALYVQGQFERAIADFDVVL 231

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           + +P   + L  RG A    +  + A+ DF E ++ +P+    +  RG AR  + +   A
Sbjct: 232 RTEPNNQDMLAYRGQAHIELKRFDQAVKDFDELVRLDPNNARGYVGRGFARYQVKDYALA 291

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
             D  +ALE +PN+  +   R + + +     AA  D   C  LD   K+ Y
Sbjct: 292 KADFDRALELDPNTGKVFCYRAMTHREMGQLEAADADFRQCFTLDVGQKTVY 343


>gi|425450205|ref|ZP_18830037.1| Mom72 protein [Microcystis aeruginosa PCC 7941]
 gi|389769061|emb|CCI05989.1| Mom72 protein [Microcystis aeruginosa PCC 7941]
          Length = 260

 Score = 99.4 bits (246), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 10/204 (4%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL   PN  + L  R  V++  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           G + +A E + KA+ L      DR F     +    Y      E AL    + L I+  F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALSYNRAGQQEMALRDYNESLKINANF 205

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDL 608
           ++AYH RGL  + LG  +KAI DL
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADL 229



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 2/193 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++  G Y+ AI+ F Q L+ +P   +A   RG A     + E AI+D+T+A+  N
Sbjct: 39  NRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQALTIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   R        +   A++D +KA+    N AD    RG           A+ED
Sbjct: 99  PNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGRHLEAIED 158

Query: 506 LSACVKLDKENKSAYTYLGLALS--SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +  + L         +   ALS    G+ + A   + ++++++ NF EA+ +    Y  
Sbjct: 159 YTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYNESLKINANFAEAYHNRGLTYYK 218

Query: 564 LANSEKALECLQQ 576
           L N EKA+  L++
Sbjct: 219 LGNREKAIADLEE 231



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 97/199 (48%), Gaps = 2/199 (1%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  LS      P  A   + RG+      D++ A+ D +  ++L+ ++  AY   G A  
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+Y++A   + +A+ ++ N++ A G+    +      E A+E   + + ++  F+  +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREAIKDYDAAL 646
             RG     LG+H +AI+D +  L +  +  +    Y RA  Y+  G+   A++DY+ +L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYNESL 199

Query: 647 DLELDSMEKFVLQCLAFYQ 665
            +  +  E +  + L +Y+
Sbjct: 200 KINANFAEAYHNRGLTYYK 218



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 2/218 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  +    +NP     +  RG  R   G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A            +Y+ A E   KAI L+ NF + +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   + ++ R L  +  GQ + A++D +  L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYNESL 199

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            I+ +  E  + R   Y+ +G   +AI D + A  L L
Sbjct: 200 KINANFAEAYHNRGLTYYKLGNREKAIADLEEAARLAL 237



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A++  G+Y  AI+ + Q L  +P Y  AL  R       ++ EAA+ D T+A
Sbjct: 69  DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG  +EAI+D +KAL  +       I + R +   +    
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQ 188

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D +  +K++     AY   GL    +G  +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225



 Score = 40.4 bits (93), Expect = 4.9,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + G++  AI  + + L       +  I    A ++ R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYN 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL +A
Sbjct: 197 ESLKINANFAEAYHNRGLTYYKLGNREKAIADLEEA 232


>gi|440751922|ref|ZP_20931125.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
 gi|440176415|gb|ELP55688.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
          Length = 260

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 67/204 (32%), Positives = 98/204 (48%), Gaps = 10/204 (4%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL   PN  + L  R  V++  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           G + +A E + KA+ L      DR F     +    Y      E AL    + L I+  F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALSYNRAGQQEMALRDYNESLKINANF 205

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDL 608
           ++AYH RGL  + LG  +KAI DL
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADL 229



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 2/193 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++  G Y+ AI+ F Q L+ +P   +A   RG A     + E AI+D+T+A+  N
Sbjct: 39  NRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQALTIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   R        +   A++D +KA+    N AD    RG           A+ED
Sbjct: 99  PNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGRHLEAIED 158

Query: 506 LSACVKLDKENKSAYTYLGLALS--SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +  + L         +   ALS    G+ + A   + ++++++ NF EA+ +    Y  
Sbjct: 159 YTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYNESLKINANFAEAYHNRGLTYYK 218

Query: 564 LANSEKALECLQQ 576
           L N EKA+  L++
Sbjct: 219 LGNREKAIADLEE 231



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 97/199 (48%), Gaps = 2/199 (1%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           +  LS      P  A   + RG+      D++ A+ D +  ++L+ ++  AY   G A  
Sbjct: 20  VSPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+Y++A   + +A+ ++ N++ A G+    +      E A+E   + + ++  F+  +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREAIKDYDAAL 646
             RG     LG+H +AI+D +  L +  +  +    Y RA  Y+  G+   A++DY+ +L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYNESL 199

Query: 647 DLELDSMEKFVLQCLAFYQ 665
            +  +  E +  + L +Y+
Sbjct: 200 KINANFAEAYHNRGLTYYK 218



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 2/218 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           +S  +    +NP     +  RG  R   G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 20  VSPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A            +Y+ A E   KAI L+ NF + +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   + ++ R L  +  GQ + A++D +  L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYNESL 199

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            I+ +  E  + R   Y+ +G   +AI D + A  L L
Sbjct: 200 KINANFAEAYHNRGLTYYKLGNREKAIADLEEAARLAL 237



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A++  G+Y  AI+ + Q L  +P Y  AL  R       ++ EAA+ D T+A
Sbjct: 69  DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG  +EAI+D +KAL  +       I + R +   +    
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQ 188

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D +  +K++     AY   GL    +G  +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225



 Score = 40.4 bits (93), Expect = 5.0,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + G++  AI  + + L       +  I    A ++ R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALSYNRAGQQEMALRDYN 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL +A
Sbjct: 197 ESLKINANFAEAYHNRGLTYYKLGNREKAIADLEEA 232


>gi|328954592|ref|YP_004371926.1| hypothetical protein Desac_2946 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454916|gb|AEB10745.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
           acetoxidans DSM 11109]
          Length = 668

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 167/378 (44%), Gaps = 29/378 (7%)

Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRS-K 347
           ++   + R GR      D +  L  +       +    +YSK   SD    D  ++R  +
Sbjct: 160 NRGMAHSRRGRYDQAIADYNRALELNPGDAQVYHLRGIAYSKLGRSDLAKEDFQKARGLQ 219

Query: 348 LSFKWDMLKET-SNEAKRNK---------KFCVTRISKSKSISVDFRLSRGIAQVNEGKY 397
           +    + +    ++EA+ ++         +F   R S  +SI   +  ++G+      +Y
Sbjct: 220 IPVTLESVPPALTDEARPSREVRESAPPEQFITVRSSLDRSIKPIY--NQGVDHFFNKQY 277

Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
             A+S F Q++   P +PEA   RG   A + + E AI+DF   ++ +P+ G+A+  RG 
Sbjct: 278 DLAVSEFSQVINAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDPNRGDAYVNRGM 337

Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
           A+   G   +A+ D ++AL+F P+ A I   RG V         A ED     +L    +
Sbjct: 338 AQVRRGRLEKALADFNRALQFNPSDAQIYRARGNVYDMLHKTQQAREDFQKAKEL--SGR 395

Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL-EAWGHLTQFYQDLANSEKALECLQQ 576
            AY+              A++  +      R  +  + G +     + A  + A + +Q 
Sbjct: 396 VAYS-----------PPSAQDTAIPVPPSTRPVVAPSAGPVAP--PESAADQAAWDKIQN 442

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L I+ + + AY+ RG L    G+   AI D S  L + P  ++    R + +   G++ 
Sbjct: 443 ALKINPKNADAYYQRGGLQLKRGKIDDAIADFSRSLELRPKFVKAYVDRGTAWAKKGQFD 502

Query: 637 EAIKDYDAALDLELDSME 654
           +A+ D + ALDL+ DS+E
Sbjct: 503 QALVDLNRALDLDPDSVE 520



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 61/340 (17%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+    +G+   AI+ F+ +L+ DP   +A + RG A+  +  LE A++DF  A+Q 
Sbjct: 299 FNRGMIYALKGQDELAIADFNAVLRIDPNRGDAYVNRGMAQVRRGRLEKALADFNRALQF 358

Query: 445 NPSAGEAWKRRG----------QAR----------AALGESVEAIQD------------- 471
           NPS  + ++ RG          QAR            +  S  + QD             
Sbjct: 359 NPSDAQIYRARGNVYDMLHKTQQAREDFQKAKELSGRVAYSPPSAQDTAIPVPPSTRPVV 418

Query: 472 ---------------------LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
                                +  AL+  P +AD  ++RG +  K    + A+ D S  +
Sbjct: 419 APSAGPVAPPESAADQAAWDKIQNALKINPKNADAYYQRGGLQLKRGKIDDAIADFSRSL 478

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           +L  +   AY   G A +  G++ +A     +A+ LD + +E+  +    Y   +  ++A
Sbjct: 479 ELRPKFVKAYVDRGTAWAKKGQFDQALVDLNRALDLDPDSVESLNNRGGIYARQSMYDRA 538

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           L  L + L ++  ++KAY+ R  + +  G  ++A+ DL   + +DP + +  Y R   Y 
Sbjct: 539 LSDLNRALDLNPNYAKAYYNRAQVYYFTGHLQQAVADLEKAVSLDPKDADAYYNRGLIYD 598

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
              +Y  AI D++ AL L     +       A+Y + +AL
Sbjct: 599 KRKQYDLAIADFNQALALNPRLAQ-------AYYDRAVAL 631



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 105/215 (48%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           +AA      A++ NP   +A+ +RG  +   G+  +AI D S++LE  P       +RG 
Sbjct: 434 QAAWDKIQNALKINPKNADAYYQRGGLQLKRGKIDDAIADFSRSLELRPKFVKAYVDRGT 493

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
              K   F+ A+ DL+  + LD ++  +    G   +    Y +A     +A+ L+ N+ 
Sbjct: 494 AWAKKGQFDQALVDLNRALDLDPDSVESLNNRGGIYARQSMYDRALSDLNRALDLNPNYA 553

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +A+ +  Q Y    + ++A+  L++ + +D + + AY+ RGL+     Q+  AI D +  
Sbjct: 554 KAYYNRAQVYYFTGHLQQAVADLEKAVSLDPKDADAYYNRGLIYDKRKQYDLAIADFNQA 613

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           L ++P   +  Y RA      G  +EA+  Y+A L
Sbjct: 614 LALNPRLAQAYYDRAVALEKTGRRQEALDSYEAFL 648



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 14/272 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+   +  +Y  A++ F +I+   P + E+   RG       + E AI+DF   ++ +
Sbjct: 92  NQGVDYFHTKQYDLAVATFSRIIANHPDHVESYYNRGLIYTLLGKEELAIADFGTVLRLD 151

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A +  G   +AI D ++ALE  P  A + H RGI   K    + A ED
Sbjct: 152 PVRPAAYYNRGMAHSRRGRYDQAIADYNRALELNPGDAQVYHLRGIAYSKLGRSDLAKED 211

Query: 506 LSACVKLD-----KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG----H 556
                 L      +    A T        + E    E+       LDR+    +     H
Sbjct: 212 FQKARGLQIPVTLESVPPALTDEARPSREVRESAPPEQFITVRSSLDRSIKPIYNQGVDH 271

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                 DLA SE       QV+     F +AY  RG++    GQ + AI D ++ L IDP
Sbjct: 272 FFNKQYDLAVSE-----FSQVINAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDP 326

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           +  +    R       G   +A+ D++ AL  
Sbjct: 327 NRGDAYVNRGMAQVRRGRLEKALADFNRALQF 358



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 12/288 (4%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
             +RI  +    V+   +RG+     GK   AI+ F  +L+ DP+ P A   RG A + +
Sbjct: 109 TFSRIIANHPDHVESYYNRGLIYTLLGKEELAIADFGTVLRLDPVRPAAYYNRGMAHSRR 168

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA--------LEFEP 480
              + AI+D+  A++ NP   + +  RG A + LG S  A +D  KA        LE  P
Sbjct: 169 GRYDQAIADYNRALELNPGDAQVYHLRGIAYSKLGRSDLAKEDFQKARGLQIPVTLESVP 228

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            +   L +    + + ++     + ++    LD+  K  Y   G+      +Y  A    
Sbjct: 229 PA---LTDEARPSREVRESAPPEQFITVRSSLDRSIKPIYN-QGVDHFFNKQYDLAVSEF 284

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            + I    NF EA+ +    Y      E A+     VL ID     AY  RG+     G+
Sbjct: 285 SQVINAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDPNRGDAYVNRGMAQVRRGR 344

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            +KA+ D +  L  +PS+ +    R + Y  + + ++A +D+  A +L
Sbjct: 345 LEKALADFNRALQFNPSDAQIYRARGNVYDMLHKTQQAREDFQKAKEL 392



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 42/78 (53%)

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           ++Y+ RGL+   LG+ + AI D  + L +DP      Y R   +   G Y +AI DY+ A
Sbjct: 122 ESYYNRGLIYTLLGKEELAIADFGTVLRLDPVRPAAYYNRGMAHSRRGRYDQAIADYNRA 181

Query: 646 LDLELDSMEKFVLQCLAF 663
           L+L     + + L+ +A+
Sbjct: 182 LELNPGDAQVYHLRGIAY 199



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 48/100 (48%)

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
           +E++ +    Y  L   E A+     VL +D     AY+ RG+     G++ +AI D + 
Sbjct: 121 VESYYNRGLIYTLLGKEELAIADFGTVLRLDPVRPAAYYNRGMAHSRRGRYDQAIADYNR 180

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            L ++P + +  +LR   Y  +G    A +D+  A  L++
Sbjct: 181 ALELNPGDAQVYHLRGIAYSKLGRSDLAKEDFQKARGLQI 220


>gi|145530013|ref|XP_001450788.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418413|emb|CAK83391.1| unnamed protein product [Paramecium tetraurelia]
          Length = 652

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 119/247 (48%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  +D+ +  +P    A   +G+A     + + AI  + +AI  NP    AW  +G A 
Sbjct: 2   AIECYDKSIAINPNEDSAWHNKGSALCDLNKYQEAIECYEKAIAINPKYDSAWHNKGWAL 61

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             L +  EAI+  +KA+   P        +G    K   +  A++     + ++ +  SA
Sbjct: 62  CYLNKFQEAIECNNKAIAINPKYDSAWQNKGSALHKLNKYQEAIKCYDKAIAINPKYDSA 121

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +   G AL    +Y++A E + KAI ++  +  AW    Q   +L   +KA++C ++ + 
Sbjct: 122 WHSKGQALEDQNKYQEAIECYDKAIAINSKYDCAWHSKGQALYNLNQYQKAIQCYEKAIV 181

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I+ ++  A+H +G  L  L  +++AIK     + I+P      + +    + + +Y+EAI
Sbjct: 182 INPKYDSAWHNKGSALCNLNNYQEAIKCYDKAIAINPKYDSAWHNKGWALYKLNKYQEAI 241

Query: 640 KDYDAAL 646
           K YD A+
Sbjct: 242 KCYDKAI 248



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 129/270 (47%), Gaps = 7/270 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A  +  KY  AI  +++ +  +P Y  A   +G A  +  + + AI    +AI  N
Sbjct: 22  NKGSALCDLNKYQEAIECYEKAIAINPKYDSAWHNKGWALCYLNKFQEAIECNNKAIAIN 81

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW+ +G A   L +  EAI+   KA+   P      H +G        +  A+E 
Sbjct: 82  PKYDSAWQNKGSALHKLNKYQEAIKCYDKAIAINPKYDSAWHSKGQALEDQNKYQEAIEC 141

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + ++ +   A+   G AL ++ +Y+KA + + KAI ++  +  AW +      +L 
Sbjct: 142 YDKAIAINSKYDCAWHSKGQALYNLNQYQKAIQCYEKAIVINPKYDSAWHNKGSALCNLN 201

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N ++A++C  + + I+ ++  A+H +G  L+ L ++++AIK     + ++P      +  
Sbjct: 202 NYQEAIKCYDKAIAINPKYDSAWHNKGWALYKLNKYQEAIKCYDKAIYMNPKYDSAWHKM 261

Query: 626 ASCYHAIG-------EYREAIKDYDAALDL 648
               H +G       +Y+EA + YD A+ +
Sbjct: 262 GIRNHYLGWALENLNKYQEANECYDKAIAI 291



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 123/270 (45%), Gaps = 7/270 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+G A  ++ KY  AI  +D+ +  +  Y  A   +G A     + + AI  + +AI  N
Sbjct: 124 SKGQALEDQNKYQEAIECYDKAIAINSKYDCAWHSKGQALYNLNQYQKAIQCYEKAIVIN 183

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  +G A   L    EAI+   KA+   P      H +G   +K   +  A++ 
Sbjct: 184 PKYDSAWHNKGSALCNLNNYQEAIKCYDKAIAINPKYDSAWHNKGWALYKLNKYQEAIKC 243

Query: 506 LSACVKLDKENKSAYT-------YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
               + ++ +  SA+        YLG AL ++ +Y++A E + KAI ++  +  +  +  
Sbjct: 244 YDKAIYMNPKYDSAWHKMGIRNHYLGWALENLNKYQEANECYDKAIAINPKYDSSQFNKG 303

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           Q  +DL   + A++   +   I+ ++  +    G  +  L +  + I+     + I+P  
Sbjct: 304 QALEDLIKDQGAIQSYDKATAINPKYDSSSQSNGFCIQDLNKQLEEIECYIKAIAINPKY 363

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDL 648
               + + S  H + +Y+EAI+ Y+ A+  
Sbjct: 364 DSTWHNKGSELHKLNKYQEAIECYNKAISF 393



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 134/302 (44%), Gaps = 2/302 (0%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAI 442
           + ++G A  +  K   AI  +D+    +P Y  +    G   +   ++LE  I  + +AI
Sbjct: 299 QFNKGQALEDLIKDQGAIQSYDKATAINPKYDSSSQSNGFCIQDLNKQLEE-IECYIKAI 357

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
             NP     W  +G     L +  EAI+  +KA+ F PN     +  G        +  A
Sbjct: 358 AINPKYDSTWHNKGSELHKLNKYQEAIECYNKAISFNPNQDSTWYHTGSALCNLNKYQEA 417

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           ++     + ++ +   A    GLAL ++ +Y++A E   KAI ++  +  AW +      
Sbjct: 418 IQCYDKAISINHKLNEAQNNKGLALYNLNKYQEAIECFNKAIAINPKYDIAWYNKGSALC 477

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +L   ++A+EC  + + I+ +++ A++ +GL L    ++++AI+     + ++P      
Sbjct: 478 NLTKYQQAIECYDKAIAINPKYASAWNNKGLALDDQNKYQEAIECYDKAMAVNPKYDGAW 537

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCW 682
           + +    H + ++ EAI+ Y  A+ +       +  Q    Y   +AL+   K       
Sbjct: 538 HNKGFALHKLNKFSEAIECYVKAIAINPKDDSSWNNQGKQLYYSGLALHKLQKFKDAISC 597

Query: 683 FD 684
           FD
Sbjct: 598 FD 599



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 117/259 (45%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A  N  KY  A   +D+ +  +P Y  +   +G A     + + AI  + +A   NP 
Sbjct: 269 GWALENLNKYQEANECYDKAIAINPKYDSSQFNKGQALEDLIKDQGAIQSYDKATAINPK 328

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              + +  G     L + +E I+   KA+   P      H +G    K   +  A+E  +
Sbjct: 329 YDSSSQSNGFCIQDLNKQLEEIECYIKAIAINPKYDSTWHNKGSELHKLNKYQEAIECYN 388

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +  +    S + + G AL ++ +Y++A + + KAI ++    EA  +      +L   
Sbjct: 389 KAISFNPNQDSTWYHTGSALCNLNKYQEAIQCYDKAISINHKLNEAQNNKGLALYNLNKY 448

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+EC  + + I+ ++  A++ +G  L  L ++++AI+     + I+P        +  
Sbjct: 449 QEAIECFNKAIAINPKYDIAWYNKGSALCNLTKYQQAIECYDKAIAINPKYASAWNNKGL 508

Query: 628 CYHAIGEYREAIKDYDAAL 646
                 +Y+EAI+ YD A+
Sbjct: 509 ALDDQNKYQEAIECYDKAM 527


>gi|425460167|ref|ZP_18839649.1| Mom72 protein [Microcystis aeruginosa PCC 9808]
 gi|389827162|emb|CCI21743.1| Mom72 protein [Microcystis aeruginosa PCC 9808]
          Length = 260

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 67/207 (32%), Positives = 99/207 (47%), Gaps = 10/207 (4%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL   PN  + L  R  V++  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           G + +A E + KA+ L      DR F     +    Y      E AL    + L I+  F
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYDESLKINANF 205

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           ++AYH RGL  + LG  +KAI DL + 
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEAA 232



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/199 (24%), Positives = 96/199 (48%), Gaps = 2/199 (1%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  LS      P  A   + RG+      D++ A+ D +  ++L+ ++  AY   G A  
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+Y++A   + +A+ ++ N++ A G+    +      E A+E   + + ++  F+  +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREAIKDYDAAL 646
             RG     LG+H +AI+D +  L +  +  +    Y RA  Y+  G+   A++DYD +L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYDESL 199

Query: 647 DLELDSMEKFVLQCLAFYQ 665
            +  +  E +  + L  Y+
Sbjct: 200 KINANFAEAYHNRGLTHYK 218



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 2/192 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++  G Y+ AI+ F Q L+ +P   +A   RG A     + E AI+D+T+A+  N
Sbjct: 39  NRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQALTIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   R        +   A++D +KA+    N AD    RG           A+ED
Sbjct: 99  PNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGRHLEAIED 158

Query: 506 LSACVKLD--KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +  + L   +     +    LA +  G+ + A   + ++++++ NF EA+ +    +  
Sbjct: 159 YTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYDESLKINANFAEAYHNRGLTHYK 218

Query: 564 LANSEKALECLQ 575
           L N EKA+  L+
Sbjct: 219 LGNREKAIADLE 230



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 2/218 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  +    +NP     +  RG  R   G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A            +Y+ A E   KAI L+ NF + +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   + ++ R L  +  GQ + A++D    L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYDESL 199

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            I+ +  E  + R   ++ +G   +AI D +AA  L L
Sbjct: 200 KINANFAEAYHNRGLTHYKLGNREKAIADLEAAARLAL 237



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A++  G+Y  AI+ + Q L  +P Y  AL  R       ++ EAA+ D T+A
Sbjct: 69  DAYYNRGYAELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG  +EAI+D +KAL  +       I + R +   +    
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D    +K++     AY   GL    +G  +KA
Sbjct: 189 EMALRDYDESLKINANFAEAYHNRGLTHYKLGNREKA 225



 Score = 41.2 bits (95), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + G++  AI  + + L       +  I    A A+ R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYD 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL  A
Sbjct: 197 ESLKINANFAEAYHNRGLTHYKLGNREKAIADLEAA 232


>gi|300863514|ref|ZP_07108466.1| Tetratricopeptide TPR_2 (fragment) [Oscillatoria sp. PCC 6506]
 gi|300338470|emb|CBN53608.1| Tetratricopeptide TPR_2 (fragment) [Oscillatoria sp. PCC 6506]
          Length = 401

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 131/289 (45%), Gaps = 7/289 (2%)

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P  P+A   +G A       + AI+ +T+A++ NP   EAW  RG A   LG + EAI D
Sbjct: 30  PQNPQACYDQGNALVQLGRFQEAIASWTQAVKLNPDFHEAWYNRGVAYRKLGCNQEAIAD 89

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             K+LE +P +A+  + R       + F  A+ D    +++  E   A++  G    ++ 
Sbjct: 90  YDKSLEIKPENAEAWYNRANALRSLERFEEAIADYDKALQIRPEYHEAWSNRGNTFVNLE 149

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
             ++A   + KA+ +  ++ EAW +     + L    +A+    + L I     +A++ R
Sbjct: 150 RNEEAIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWYNR 209

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G+ L   G+  +AI      L + P+  E    R +     G+   AI  +D A++L+ D
Sbjct: 210 GIALANSGEFAEAIASYDKTLALKPNAWEVWNKRGTALVQSGQLDVAIASWDRAVELKPD 269

Query: 652 SMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
             E       A+Y + +AL +  K  +    +D   +  P  +E W  R
Sbjct: 270 YHE-------AWYNRGLALASLEKFAAAIASWDKSLEFHPDNREAWYNR 311



 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 5/287 (1%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA- 424
            +   +++  ++ DF     +RG+A    G    AI+ +D+ L+  P   EA   R  A 
Sbjct: 52  AIASWTQAVKLNPDFHEAWYNRGVAYRKLGCNQEAIADYDKSLEIKPENAEAWYNRANAL 111

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           R+ +R  E AI+D+ +A+Q  P   EAW  RG     L  + EAI D  KAL   P+  +
Sbjct: 112 RSLER-FEEAIADYDKALQIRPEYHEAWSNRGNTFVNLERNEEAIADYDKALAIRPDYYE 170

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
             + RG+       F  A+   +  +++      A+   G+AL++ GE+ +A  ++ K +
Sbjct: 171 AWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWYNRGIALANSGEFAEAIASYDKTL 230

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
            L  N  E W             + A+    + + +   + +A++ RGL L  L +   A
Sbjct: 231 ALKPNAWEVWNKRGTALVQSGQLDVAIASWDRAVELKPDYHEAWYNRGLALASLEKFAAA 290

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           I      L   P N E  Y R      +    +AI  YD  L+++ D
Sbjct: 291 IASWDKSLEFHPDNREAWYNRGIALSKLERIEDAIASYDKVLEIKPD 337



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 138/308 (44%), Gaps = 13/308 (4%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL---EAAISDFTEAIQ 443
           +G A V  G++  AI+ + Q +K +P + EA   RG A    R+L   + AI+D+ ++++
Sbjct: 39  QGNALVQLGRFQEAIASWTQAVKLNPDFHEAWYNRGVA---YRKLGCNQEAIADYDKSLE 95

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
             P   EAW  R  A  +L    EAI D  KAL+  P   +    RG      +    A+
Sbjct: 96  IKPENAEAWYNRANALRSLERFEEAIADYDKALQIRPEYHEAWSNRGNTFVNLERNEEAI 155

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D    + +  +   A+   G+AL S+G++ +A  ++ +A+++  N  +AW +      +
Sbjct: 156 ADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWYNRGIALAN 215

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
                +A+    + L +     + ++ RG  L   GQ   AI      + + P   E  Y
Sbjct: 216 SGEFAEAIASYDKTLALKPNAWEVWNKRGTALVQSGQLDVAIASWDRAVELKPDYHEAWY 275

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWF 683
            R     ++ ++  AI  +D +L+   D+ E       A+Y + IAL    +I      +
Sbjct: 276 NRGLALASLEKFAAAIASWDKSLEFHPDNRE-------AWYNRGIALSKLERIEDAIASY 328

Query: 684 DIDGDIDP 691
           D   +I P
Sbjct: 329 DKVLEIKP 336



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 114/228 (50%), Gaps = 5/228 (2%)

Query: 363 KRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
           +RN++  +    K+ +I  D+     +RG+A  + GK+A AI+ +++ L+  P   +A  
Sbjct: 149 ERNEE-AIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRALEIRPNLHQAWY 207

Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
            RG A A   E   AI+ + + +   P+A E W +RG A    G+   AI    +A+E +
Sbjct: 208 NRGIALANSGEFAEAIASYDKTLALKPNAWEVWNKRGTALVQSGQLDVAIASWDRAVELK 267

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           P+  +  + RG+     + F AA+      ++   +N+ A+   G+ALS +   + A  +
Sbjct: 268 PDYHEAWYNRGLALASLEKFAAAIASWDKSLEFHPDNREAWYNRGIALSKLERIEDAIAS 327

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID-KRFSK 586
           + K +++  +      H    Y    N++ A+E LQ+ + ++ K++ K
Sbjct: 328 YDKVLEIKPDDAATLYHKAGLYCQQNNTDLAMENLQRAIALNPKKYRK 375



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 7/228 (3%)

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           +KA+E  P +    +++G    +   F  A+   +  VKL+ +   A+   G+A   +G 
Sbjct: 23  NKAVEITPQNPQACYDQGNALVQLGRFQEAIASWTQAVKLNPDFHEAWYNRGVAYRKLGC 82

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
            ++A   + K++++     EAW +     + L   E+A+    + L I   + +A+  RG
Sbjct: 83  NQEAIADYDKSLEIKPENAEAWYNRANALRSLERFEEAIADYDKALQIRPEYHEAWSNRG 142

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
                L ++++AI D    L I P   E  Y R     ++G++ EAI  Y+ AL++  + 
Sbjct: 143 NTFVNLERNEEAIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRALEIRPNL 202

Query: 653 MEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            +       A+Y + IAL  + +       +D    + P   E W KR
Sbjct: 203 HQ-------AWYNRGIALANSGEFAEAIASYDKTLALKPNAWEVWNKR 243



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 5/129 (3%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
           +L    + I + D+ + +    A A   R     L SL  + +AI   D  L    E  +
Sbjct: 79  KLGCNQEAIADYDKSLEIKPENAEAWYNRAN--ALRSLERFEEAIADYDKALQIRPEYHE 136

Query: 72  I-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
              NR   +  LE ++  I D DKAL + P   +A+  +G A  +LG+  EA++ + +  
Sbjct: 137 AWSNRGNTFVNLERNEEAIADYDKALAIRPDYYEAWYNRGMALKSLGKFAEAIASYNRAL 196

Query: 131 E--HALHQS 137
           E    LHQ+
Sbjct: 197 EIRPNLHQA 205


>gi|158523125|ref|YP_001530995.1| hypothetical protein Dole_3115 [Desulfococcus oleovorans Hxd3]
 gi|158511951|gb|ABW68918.1| TPR repeat-containing protein [Desulfococcus oleovorans Hxd3]
          Length = 284

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 1/261 (0%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           +A V  G+Y  A+  F ++L   P +  A   R  AR    + E A++D+  A+  NP  
Sbjct: 1   MASVQAGQYDKAVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDF 60

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E++  RG+A   +G+  +A+ DL +A+E  P+ AD  + RG+   K  DF  A+ D S 
Sbjct: 61  PESYNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIGALADHSR 120

Query: 509 CVKLDKENKSA-YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
            +++  +  +  Y   G+     G+  KA      A+  +  F  A+ +L   + +    
Sbjct: 121 AIQMRPDRAAEFYNARGVTWLEKGDPDKAIADFTAALAENPGFAWAYNNLASAWMEKGQP 180

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A+    + L I  R ++A   RG +    G +  A+ DL   +   PS     Y RA 
Sbjct: 181 DRAMAAYDKALSIFPRMAEALSGRGSVRAQAGDYTGALADLDKAIEFYPSYHTAYYNRAR 240

Query: 628 CYHAIGEYREAIKDYDAALDL 648
            Y   G   +A+ +   A+ L
Sbjct: 241 VYQLTGNREKALANAVKAVGL 261



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/234 (24%), Positives = 111/234 (47%), Gaps = 1/234 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R  A+ + G Y  A++ +++ L  +P +PE+  GRG A     +++ A++D   A++  
Sbjct: 32  NRAAARWDLGDYEGAVADYNRALAINPDFPESYNGRGKAFCDMGQMDKALADLDRAVELA 91

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN-SADILHERGIVNFKFKDFNAAVE 504
           P   +A+  RG A    G+ + A+ D S+A++  P+ +A+  + RG+   +  D + A+ 
Sbjct: 92  PDFADAYNNRGVALRKTGDFIGALADHSRAIQMRPDRAAEFYNARGVTWLEKGDPDKAIA 151

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +A +  +     AY  L  A    G+  +A  A+ KA+ +     EA           
Sbjct: 152 DFTAALAENPGFAWAYNNLASAWMEKGQPDRAMAAYDKALSIFPRMAEALSGRGSVRAQA 211

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            +   AL  L + +     +  AY+ R  +    G  +KA+ +    +G+ P+N
Sbjct: 212 GDYTGALADLDKAIEFYPSYHTAYYNRARVYQLTGNREKALANAVKAVGLFPNN 265



 Score = 52.8 bits (125), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 60/132 (45%)

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           +A    G+Y KA EA  + + L  +F  A+ +      DL + E A+    + L I+  F
Sbjct: 1   MASVQAGQYDKAVEAFTRVLDLSPDFAPAYNNRAAARWDLGDYEGAVADYNRALAINPDF 60

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
            ++Y+ RG     +GQ  KA+ DL   + + P   +    R       G++  A+ D+  
Sbjct: 61  PESYNGRGKAFCDMGQMDKALADLDRAVELAPDFADAYNNRGVALRKTGDFIGALADHSR 120

Query: 645 ALDLELDSMEKF 656
           A+ +  D   +F
Sbjct: 121 AIQMRPDRAAEF 132



 Score = 50.8 bits (120), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 55/113 (48%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           + +F  +RG+  + +G    AI+ F   L E+P +  A     +A   + + + A++ + 
Sbjct: 129 AAEFYNARGVTWLEKGDPDKAIADFTAALAENPGFAWAYNNLASAWMEKGQPDRAMAAYD 188

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           +A+   P   EA   RG  RA  G+   A+ DL KA+EF P+     + R  V
Sbjct: 189 KALSIFPRMAEALSGRGSVRAQAGDYTGALADLDKAIEFYPSYHTAYYNRARV 241


>gi|13472041|ref|NP_103608.1| hypothetical protein mll2208 [Mesorhizobium loti MAFF303099]
 gi|14022786|dbj|BAB49394.1| mll2208 [Mesorhizobium loti MAFF303099]
          Length = 551

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 137/270 (50%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           + +F  +RG+A   +G    AI+ +D  +K +P    A   RG   A + + E AI+D++
Sbjct: 128 NAEFYYNRGVAWSYKGNDERAIADYDAAIKLNPGDARAYHNRGLNWARKGDKERAIADYS 187

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI  +P    ++  RG A  + G+   A+ D ++ +  +  +A   + RG++  +  D 
Sbjct: 188 QAISLDPKNASSYNNRGDAWDSKGDDDRAMADYNQVIILDTKNAHAYYRRGLIWSRKGDD 247

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           + A+ D S  + LD  + S     GLA    G+  +A     +AI+LD     A+     
Sbjct: 248 SRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDPKMAAAYYDRGT 307

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            +    + ++A+    +V+ ++   + A + RG +L+ LG++++A+ DL+  +G+DP   
Sbjct: 308 EWLRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNELGEYERALADLNRAIGLDPKQA 367

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +    RA    A G++  A+ DY+ A+ L+
Sbjct: 368 KIYSNRAIARAAKGDFAPALADYNQAIALD 397



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 129/308 (41%), Gaps = 9/308 (2%)

Query: 371 TRISKSKSISVDFR----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           T I + K+ + D R     +R  A +  G    A + +D+ +  +P    A    G    
Sbjct: 47  TAIIEDKAEASDNRAAAYFNRAGALIRRGDNDDAFADYDKAIGINPELSAAYYNNGIILV 106

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
            + + + AI+   +AI  +P   E +  RG A +  G    AI D   A++  P  A   
Sbjct: 107 LKGDYDRAITYLDQAIFLDPDNAEFYYNRGVAWSYKGNDERAIADYDAAIKLNPGDARAY 166

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           H RG+   +  D   A+ D S  + LD +N S+Y   G A  S G+  +A   + + I L
Sbjct: 167 HNRGLNWARKGDKERAIADYSQAISLDPKNASSYNNRGDAWDSKGDDDRAMADYNQVIIL 226

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           D     A+      +    +  +A+    QV+ +D       + +GL     G   +AI 
Sbjct: 227 DTKNAHAYYRRGLIWSRKGDDSRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIA 286

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE-LDSM----EKFVLQCL 661
           D    + +DP      Y R + +   G+   AI DY   + LE  ++M      FVL  L
Sbjct: 287 DFDEAIRLDPKMAAAYYDRGTEWLRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNEL 346

Query: 662 AFYQKEIA 669
             Y++ +A
Sbjct: 347 GEYERALA 354



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+    +G  + AI+ + Q++  DP  P     +G A   + + + AI+DF EAI+ +P
Sbjct: 237 RGLIWSRKGDDSRAIADYSQVISLDPTDPSIRYNKGLAWLRKGDGDRAIADFDEAIRLDP 296

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G+   AI D S+ +  EP +A  L++RG V  +  ++  A+ DL
Sbjct: 297 KMAAAYYDRGTEWLRKGDRDRAITDYSEVITLEPTNAMALNDRGFVLNELGEYERALADL 356

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--HLTQFYQD- 563
           +  + LD +    Y+   +A ++ G++  A   + +AI LD NF  A+       FY   
Sbjct: 357 NRAIGLDPKQAKIYSNRAIARAAKGDFAPALADYNQAIALDPNFPNAYAGRGFVNFYSGM 416

Query: 564 LANSE----KALECLQQVLY-------IDKRFSKAYHLR 591
           LA +E    KA        Y       ID+R     HLR
Sbjct: 417 LAKAEPDFAKAAALAPDNAYLAIWLDIIDRRSGGTSHLR 455


>gi|427737217|ref|YP_007056761.1| hypothetical protein Riv7116_3769 [Rivularia sp. PCC 7116]
 gi|427372258|gb|AFY56214.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
          Length = 1381

 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 14/278 (5%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+AQ   G   +A+  ++Q ++  P   E    RG        LE AI+ + +AI+ N 
Sbjct: 504 QGLAQARAGNLEAAVQFYEQAVQIKPDVHEYWFNRGLTLFHLGRLEDAIASYDKAIEINN 563

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              + W  RG+A   LG   +AI   + ALE  PN  +     G+   K    + AV   
Sbjct: 564 DFYKGWYNRGRALGELGYLEDAIISFNTALEIRPNYQEAWSNNGLALLKLGRVDEAVFCY 623

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQ 559
              ++L+  +   + Y G+ALS  GEY+ A +++ KA++++    +AW       G L +
Sbjct: 624 DKSLELEPLDTENWYYRGVALSGNGEYENAIDSYDKALEIEPFLHDAWIDRGVAQGQLGE 683

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           + + + + +KAL        +   F   +  R +    LG+ K+A+      L I+P+  
Sbjct: 684 WAEAIISWDKALG-------LRPDFYLTWFNRAVAFDNLGRRKEAVASYDKALEIEPNFH 736

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
              Y RA     + +Y +AI  YD AL ++ D  E ++
Sbjct: 737 LAWYNRAVALFYLEQYEQAILCYDRALQIKADYWEAWL 774



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 7/252 (2%)

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            EAW  +G A+A  G    A+Q   +A++ +P+  +    RG+  F       A+     
Sbjct: 498 AEAWYFQGLAQARAGNLEAAVQFYEQAVQIKPDVHEYWFNRGLTLFHLGRLEDAIASYDK 557

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++++ +    +   G AL  +G  + A  +   A+++  N+ EAW +       L   +
Sbjct: 558 AIEINNDFYKGWYNRGRALGELGYLEDAIISFNTALEIRPNYQEAWSNNGLALLKLGRVD 617

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+ C  + L ++   ++ ++ RG+ L G G+++ AI      L I+P   +    R   
Sbjct: 618 EAVFCYDKSLELEPLDTENWYYRGVALSGNGEYENAIDSYDKALEIEPFLHDAWIDRGVA 677

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGD 688
              +GE+ EAI  +D AL L  D         L ++ + +A     +       +D   +
Sbjct: 678 QGQLGEWAEAIISWDKALGLRPDFY-------LTWFNRAVAFDNLGRRKEAVASYDKALE 730

Query: 689 IDPLFKEYWCKR 700
           I+P F   W  R
Sbjct: 731 IEPNFHLAWYNR 742



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 7/225 (3%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    K+  I+ DF     +RG A    G    AI  F+  L+  P Y EA    G A 
Sbjct: 551 AIASYDKAIEINNDFYKGWYNRGRALGELGYLEDAIISFNTALEIRPNYQEAWSNNGLAL 610

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                ++ A+  + ++++  P   E W  RG A +  GE   AI    KALE EP   D 
Sbjct: 611 LKLGRVDEAVFCYDKSLELEPLDTENWYYRGVALSGNGEYENAIDSYDKALEIEPFLHDA 670

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
             +RG+   +  ++  A+      + L  +    +    +A  ++G  K+A  ++ KA++
Sbjct: 671 WIDRGVAQGQLGEWAEAIISWDKALGLRPDFYLTWFNRAVAFDNLGRRKEAVASYDKALE 730

Query: 546 LDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           ++ NF  AW +  +  FY  L   E+A+ C  + L I   + +A+
Sbjct: 731 IEPNFHLAWYNRAVALFY--LEQYEQAILCYDRALQIKADYWEAW 773


>gi|425470454|ref|ZP_18849324.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis aeruginosa PCC
           9701]
 gi|389883930|emb|CCI35726.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis aeruginosa PCC
           9701]
          Length = 282

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 63/229 (27%), Positives = 108/229 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A  N G++  AI+ +D+ L+  P Y EA   RG A    R  E AI+ +  A++  P
Sbjct: 25  RGFALGNLGRFEEAIASYDRTLEFKPDYHEAWYNRGVALGNLRRFEEAIASYDRALEIKP 84

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG A   LG   EAI    +ALEF+P+  +  H RGI       F  A+   
Sbjct: 85  DDPDAWYGRGVALGNLGRFEEAIASWDRALEFKPDYHEAWHNRGIALRNLGRFEQAIASW 144

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++   +   A+   G+AL ++G +++A  +  +A+++  +  EAW         +  
Sbjct: 145 DRALEFKPDYPDAWNNRGVALGNLGRFEEAIASCDRALEIKPDLHEAWDSRGAALTFMGR 204

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
            + ALE     + I+  ++ AY+ +          + AI++L   + +D
Sbjct: 205 YKDALESYDHAIKINSNYANAYYNKACCYGLQNNVELAIENLQRAINLD 253



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 119/252 (47%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI+ +D+ L+  P Y +A  GRG A       E AI+ +   ++  P   EAW  RG A 
Sbjct: 4   AIASYDRALEIKPDYHQAWYGRGFALGNLGRFEEAIASYDRTLEFKPDYHEAWYNRGVAL 63

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             L    EAI    +ALE +P+  D  + RG+       F  A+      ++   +   A
Sbjct: 64  GNLRRFEEAIASYDRALEIKPDDPDAWYGRGVALGNLGRFEEAIASWDRALEFKPDYHEA 123

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +   G+AL ++G +++A  +  +A++   ++ +AW +      +L   E+A+    + L 
Sbjct: 124 WHNRGIALRNLGRFEQAIASWDRALEFKPDYPDAWNNRGVALGNLGRFEEAIASCDRALE 183

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I     +A+  RG  L  +G++K A++     + I+ +     Y +A CY        AI
Sbjct: 184 IKPDLHEAWDSRGAALTFMGRYKDALESYDHAIKINSNYANAYYNKACCYGLQNNVELAI 243

Query: 640 KDYDAALDLELD 651
           ++   A++L+++
Sbjct: 244 ENLQRAINLDVE 255



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 101/199 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N  ++  AI+ +D+ L+  P  P+A  GRG A       E AI+ +  A++  
Sbjct: 58  NRGVALGNLRRFEEAIASYDRALEIKPDDPDAWYGRGVALGNLGRFEEAIASWDRALEFK 117

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   +AI    +ALEF+P+  D  + RG+       F  A+  
Sbjct: 118 PDYHEAWHNRGIALRNLGRFEQAIASWDRALEFKPDYPDAWNNRGVALGNLGRFEEAIAS 177

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +   A+   G AL+ +G YK A E++  AI+++ N+  A+ +    Y    
Sbjct: 178 CDRALEIKPDLHEAWDSRGAALTFMGRYKDALESYDHAIKINSNYANAYYNKACCYGLQN 237

Query: 566 NSEKALECLQQVLYIDKRF 584
           N E A+E LQ+ + +D  +
Sbjct: 238 NVELAIENLQRAINLDVEY 256



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 56/218 (25%), Positives = 109/218 (50%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           +E AI+ +  A++  P   +AW  RG A   LG   EAI    + LEF+P+  +  + RG
Sbjct: 1   MEEAIASYDRALEIKPDYHQAWYGRGFALGNLGRFEEAIASYDRTLEFKPDYHEAWYNRG 60

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +     + F  A+      +++  ++  A+   G+AL ++G +++A  +  +A++   ++
Sbjct: 61  VALGNLRRFEEAIASYDRALEIKPDDPDAWYGRGVALGNLGRFEEAIASWDRALEFKPDY 120

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            EAW +     ++L   E+A+    + L     +  A++ RG+ L  LG+ ++AI     
Sbjct: 121 HEAWHNRGIALRNLGRFEQAIASWDRALEFKPDYPDAWNNRGVALGNLGRFEEAIASCDR 180

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            L I P   E    R +    +G Y++A++ YD A+ +
Sbjct: 181 ALEIKPDLHEAWDSRGAALTFMGRYKDALESYDHAIKI 218



 Score = 46.6 bits (109), Expect = 0.072,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 7/133 (5%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+A+    + L I   + +A++ RG  L  LG+ ++AI      L   P   E  Y R  
Sbjct: 2   EEAIASYDRALEIKPDYHQAWYGRGFALGNLGRFEEAIASYDRTLEFKPDYHEAWYNRGV 61

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG 687
               +  + EAI  YD AL+++ D  +       A+Y + +AL    +       +D   
Sbjct: 62  ALGNLRRFEEAIASYDRALEIKPDDPD-------AWYGRGVALGNLGRFEEAIASWDRAL 114

Query: 688 DIDPLFKEYWCKR 700
           +  P + E W  R
Sbjct: 115 EFKPDYHEAWHNR 127


>gi|255036666|ref|YP_003087287.1| hypothetical protein Dfer_2907 [Dyadobacter fermentans DSM 18053]
 gi|254949422|gb|ACT94122.1| Tetratricopeptide TPR_2 repeat protein [Dyadobacter fermentans DSM
           18053]
          Length = 471

 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 8/282 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG++      + +A+   D  L  +P    AL  RG  +   +E   +++DFT  I+ +
Sbjct: 157 NRGVSYAKLKNHRNALVDLDHALSLNPDELAALYARGNCKQDLQEYAGSLADFTRVIELS 216

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A+  LG+   A  D ++A+E  PN ++  + RG+   K +DF  A+ D
Sbjct: 217 PKRTGAYAGRGLAKLELGDYQGAAADFTRAIELSPNDSEYYNNRGLAKTKLEDFQGAILD 276

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD EN +AY   G A   + + + A     KAI++   +          Y    
Sbjct: 277 YDKTIQLDAENYNAYYGRGFAKGKLNDPRGAIADLSKAIEVKNAY--TGDPKKNAYIGKI 334

Query: 566 NSEKALECLQQV---LYIDK---RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           N EK  E   QV   + IDK     ++AY+ R +    +G+ K A+ DL+  + + P+  
Sbjct: 335 NKEKLDELRDQVQTNIKIDKLTNERAEAYYARAIAKSKVGELKGALADLTIAVELSPTYS 394

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
              + RA    A G+   A+ D+ +++ L  D  E + L+ +
Sbjct: 395 NAYFSRAMIRSAAGDQMGAVLDFTSSIKLRSDYPEAYYLRGI 436



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 4/232 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI--GRGTARAFQRELEAAISDFTEAI 442
            +RG+A+ N   Y  A+  +D+ ++ +P   EAL    RG +++ Q +  +AI D+++AI
Sbjct: 88  FNRGLAKANLKDYRGAMGDYDRAIELNP--KEALYYQSRGVSKSLQDDYRSAIDDYSKAI 145

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + NP   +A+  RG + A L     A+ DL  AL   P+    L+ RG      +++  +
Sbjct: 146 ELNPEEPKAYYNRGVSYAKLKNHRNALVDLDHALSLNPDELAALYARGNCKQDLQEYAGS 205

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D +  ++L  +   AY   GLA   +G+Y+ A     +AI+L  N  E + +      
Sbjct: 206 LADFTRVIELSPKRTGAYAGRGLAKLELGDYQGAAADFTRAIELSPNDSEYYNNRGLAKT 265

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            L + + A+    + + +D     AY+ RG     L   + AI DLS  + +
Sbjct: 266 KLEDFQGAILDYDKTIQLDAENYNAYYGRGFAKGKLNDPRGAIADLSKAIEV 317



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 109/241 (45%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G  +A   +   A+  +T  I  NP    ++  RG A+A L +   A+ D  +A+E  P 
Sbjct: 57  GNTKAGTGDFNGAMQAYTTVISMNPDHAPSYFNRGLAKANLKDYRGAMGDYDRAIELNPK 116

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A     RG+      D+ +A++D S  ++L+ E   AY   G++ + +  ++ A     
Sbjct: 117 EALYYQSRGVSKSLQDDYRSAIDDYSKAIELNPEEPKAYYNRGVSYAKLKNHRNALVDLD 176

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
            A+ L+ + L A        QDL     +L    +V+ +  + + AY  RGL    LG +
Sbjct: 177 HALSLNPDELAALYARGNCKQDLQEYAGSLADFTRVIELSPKRTGAYAGRGLAKLELGDY 236

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           + A  D +  + + P++ E    R      + +++ AI DYD  + L+ ++   +  +  
Sbjct: 237 QGAAADFTRAIELSPNDSEYYNNRGLAKTKLEDFQGAILDYDKTIQLDAENYNAYYGRGF 296

Query: 662 A 662
           A
Sbjct: 297 A 297



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 6/174 (3%)

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
           F   SA    E G       DFN A++  +  + ++ ++  +Y   GLA +++ +Y+ A 
Sbjct: 45  FAQRSAAEYFEDGNTKAGTGDFNGAMQAYTTVISMNPDHAPSYFNRGLAKANLKDYRGAM 104

Query: 538 EAHLKAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
             + +AI+L+     + ++ G +++  QD  +   A++   + + ++    KAY+ RG+ 
Sbjct: 105 GDYDRAIELNPKEALYYQSRG-VSKSLQD--DYRSAIDDYSKAIELNPEEPKAYYNRGVS 161

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              L  H+ A+ DL   L ++P  +  LY R +C   + EY  ++ D+   ++L
Sbjct: 162 YAKLKNHRNALVDLDHALSLNPDELAALYARGNCKQDLQEYAGSLADFTRVIEL 215



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 38/185 (20%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-S 444
           +RG+A+     +  AI  +D+ ++ D     A  GRG A+    +   AI+D ++AI+  
Sbjct: 259 NRGLAKTKLEDFQGAILDYDKTIQLDAENYNAYYGRGFAKGKLNDPRGAIADLSKAIEVK 318

Query: 445 NPSAG-------------------------------------EAWKRRGQARAALGESVE 467
           N   G                                     EA+  R  A++ +GE   
Sbjct: 319 NAYTGDPKKNAYIGKINKEKLDELRDQVQTNIKIDKLTNERAEAYYARAIAKSKVGELKG 378

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           A+ DL+ A+E  P  ++    R ++     D   AV D ++ +KL  +   AY   G+  
Sbjct: 379 ALADLTIAVELSPTYSNAYFSRAMIRSAAGDQMGAVLDFTSSIKLRSDYPEAYYLRGIVK 438

Query: 528 SSIGE 532
           +S+GE
Sbjct: 439 NSLGE 443



 Score = 48.9 bits (115), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           EA   R  A++   EL+ A++D T A++ +P+   A+  R   R+A G+ + A+ D + +
Sbjct: 361 EAYYARAIAKSKVGELKGALADLTIAVELSPTYSNAYFSRAMIRSAAGDQMGAVLDFTSS 420

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
           ++   +  +  + RGIV     + N    DLS   +L  +   AY  +G
Sbjct: 421 IKLRSDYPEAYYLRGIVKNSLGEINDGCLDLSKAGELGYQ--QAYKVIG 467



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 44/93 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R IA+   G+   A++     ++  P Y  A   R   R+   +   A+ DFT +I+  
Sbjct: 365 ARAIAKSKVGELKGALADLTIAVELSPTYSNAYFSRAMIRSAAGDQMGAVLDFTSSIKLR 424

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
               EA+  RG  + +LGE  +   DLSKA E 
Sbjct: 425 SDYPEAYYLRGIVKNSLGEINDGCLDLSKAGEL 457


>gi|443323912|ref|ZP_21052884.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
 gi|442796295|gb|ELS05593.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
          Length = 348

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 73/274 (26%), Positives = 124/274 (45%), Gaps = 14/274 (5%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           N     + I+ + +I+   P   EA   RG   A  +  + AI+D+  AI    + GE  
Sbjct: 36  NRENNQAQITEYTEIIGLYPRNAEAYYNRGNIYAQMKNYDQAIADYNSAIYLYLNYGETN 95

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             R           E ++       F P+   +  +R    +   ++  A+ D S  ++L
Sbjct: 96  ISRRTTEYLPTSDSEYVR-------FNPDLERVYFDRATTYYSLGNYENAIADYSTVIRL 148

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           +  N+ AY   GLAL +  EY KA   + + I L+ N L  +    + YQ LA  ++A+ 
Sbjct: 149 NLGNEQAYYNRGLALYNAKEYDKAIADYTQVISLNPNRLRVYNSRARAYQRLAQYDQAIA 208

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              QV+  + +  +AY  R  L   LGQ+ +AI D    + ++P+N E  Y RA  Y  +
Sbjct: 209 DYSQVIKANSQNVEAYQNRAQLYISLGQYDQAIADYGQIISLNPNNPEGYYNRAEIYDDL 268

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            +Y +AI DY+  + L   + +       A+YQ+
Sbjct: 269 KQYNKAIADYNKIIKLNPQNAK-------AYYQR 295



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 112/265 (42%)

Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
           A  N G   + +  +DQ + +        +  G     +R  E   +  +E ++ NP   
Sbjct: 60  AYYNRGNIYAQMKNYDQAIADYNSAIYLYLNYGETNISRRTTEYLPTSDSEYVRFNPDLE 119

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
             +  R     +LG    AI D S  +     +    + RG+  +  K+++ A+ D +  
Sbjct: 120 RVYFDRATTYYSLGNYENAIADYSTVIRLNLGNEQAYYNRGLALYNAKEYDKAIADYTQV 179

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           + L+      Y     A   + +Y +A   + + I+ +   +EA+ +  Q Y  L   ++
Sbjct: 180 ISLNPNRLRVYNSRARAYQRLAQYDQAIADYSQVIKANSQNVEAYQNRAQLYISLGQYDQ 239

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A+    Q++ ++    + Y+ R  +   L Q+ KAI D +  + ++P N +  Y R   Y
Sbjct: 240 AIADYGQIISLNPNNPEGYYNRAEIYDDLKQYNKAIADYNKIIKLNPQNAKAYYQRGLYY 299

Query: 630 HAIGEYREAIKDYDAALDLELDSME 654
             +    +AI D+  A +L  ++ E
Sbjct: 300 SYLENQDQAIADFKIAANLYEEANE 324



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/173 (27%), Positives = 92/173 (53%), Gaps = 11/173 (6%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
           +RG+A  N  +Y  AI+ + Q++  +P        R  ARA+QR  + + AI+D+++ I+
Sbjct: 158 NRGLALYNAKEYDKAIADYTQVISLNPNRLRVYNSR--ARAYQRLAQYDQAIADYSQVIK 215

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
           +N    EA++ R Q   +LG+  +AI D  + +   PN+ +  + R  +    K +N A+
Sbjct: 216 ANSQNVEAYQNRAQLYISLGQYDQAIADYGQIISLNPNNPEGYYNRAEIYDDLKQYNKAI 275

Query: 504 EDLSACVKLDKENKSAYTYLGLALS-------SIGEYKKAEEAHLKAIQLDRN 549
            D +  +KL+ +N  AY   GL  S       +I ++K A   + +A +++++
Sbjct: 276 ADYNKIIKLNPQNAKAYYQRGLYYSYLENQDQAIADFKIAANLYEEANEVNKH 328



 Score = 47.8 bits (112), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 60/123 (48%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +++ K+ S +V+   +R    ++ G+Y  AI+ + QI+  +P  PE    R       ++
Sbjct: 211 SQVIKANSQNVEAYQNRAQLYISLGQYDQAIADYGQIISLNPNNPEGYYNRAEIYDDLKQ 270

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
              AI+D+ + I+ NP   +A+ +RG   + L    +AI D   A      + ++   + 
Sbjct: 271 YNKAIADYNKIIKLNPQNAKAYYQRGLYYSYLENQDQAIADFKIAANLYEEANEVNKHQN 330

Query: 491 IVN 493
           ++N
Sbjct: 331 VLN 333


>gi|33863210|ref|NP_894770.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
           9313]
 gi|33635127|emb|CAE21113.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
          Length = 334

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 70/270 (25%), Positives = 129/270 (47%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A+V  G Y +AI+ +++ +  +P   +A   RG A++   + + AI+DF +AI+ NP 
Sbjct: 53  GNAKVGSGDYQAAIADYNKAIVINPKDADAYNNRGLAKSKSGDNQGAIADFNKAIEINPQ 112

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+  RG A++  G++  AI D + A+   P        RG+       +  A+ D +
Sbjct: 113 YVRAYNNRGLAKSKSGDNQGAIVDYNMAIAINPVYLYGFLNRGLAKKNLNKYQEAIVDYN 172

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + ++ +   AY   GLA   + +Y+ A     KAI L+     A+ +         ++
Sbjct: 173 KAIVINPQLAVAYHKRGLAKVDLKDYQGAIADFNKAITLNPKDAAAYNNRGAVKGKSGDN 232

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           + A+    + + ID +++ AY  RGL  + LG ++ AI D S  + IDP ++     R  
Sbjct: 233 QAAIADFNKAIEIDLQYADAYINRGLAKYNLGDNQGAITDYSEAIKIDPQDVFAYNNRGY 292

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFV 657
               + +Y+ A  D+  A  L   S  +++
Sbjct: 293 VTWKLKDYQSACNDFKKAASLGSQSTAQWI 322



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 14/277 (5%)

Query: 291 ASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSF 350
           A + ++ G    G+ D    ++  + ++  +  ++++Y+   ++ +KS D+  + +  + 
Sbjct: 46  AVLYKKSGNAKVGSGDYQAAIADYNKAIVINPKDADAYNNRGLAKSKSGDNQGAIADFN- 104

Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKY 397
           K   +      A  N+    ++   ++   VD+              L+RG+A+ N  KY
Sbjct: 105 KAIEINPQYVRAYNNRGLAKSKSGDNQGAIVDYNMAIAINPVYLYGFLNRGLAKKNLNKY 164

Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
             AI  +++ +  +P    A   RG A+   ++ + AI+DF +AI  NP    A+  RG 
Sbjct: 165 QEAIVDYNKAIVINPQLAVAYHKRGLAKVDLKDYQGAIADFNKAITLNPKDAAAYNNRGA 224

Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
            +   G++  AI D +KA+E +   AD    RG+  +   D   A+ D S  +K+D ++ 
Sbjct: 225 VKGKSGDNQAAIADFNKAIEIDLQYADAYINRGLAKYNLGDNQGAITDYSEAIKIDPQDV 284

Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            AY   G     + +Y+ A     KA  L       W
Sbjct: 285 FAYNNRGYVTWKLKDYQSACNDFKKAASLGSQSTAQW 321



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 53/213 (24%), Positives = 106/213 (49%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +K+ G A+   G+   AI D +KA+   P  AD  + RG+   K  D   A+ D +  ++
Sbjct: 49  YKKSGNAKVGSGDYQAAIADYNKAIVINPKDADAYNNRGLAKSKSGDNQGAIADFNKAIE 108

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           ++ +   AY   GLA S  G+ + A   +  AI ++  +L  + +     ++L   ++A+
Sbjct: 109 INPQYVRAYNNRGLAKSKSGDNQGAIVDYNMAIAINPVYLYGFLNRGLAKKNLNKYQEAI 168

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               + + I+ + + AYH RGL    L  ++ AI D +  + ++P +      R +    
Sbjct: 169 VDYNKAIVINPQLAVAYHKRGLAKVDLKDYQGAIADFNKAITLNPKDAAAYNNRGAVKGK 228

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            G+ + AI D++ A++++L   + ++ + LA Y
Sbjct: 229 SGDNQAAIADFNKAIEIDLQYADAYINRGLAKY 261


>gi|282899497|ref|ZP_06307462.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281195604|gb|EFA70536.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 280

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 67/225 (29%), Positives = 116/225 (51%), Gaps = 9/225 (4%)

Query: 364 RNKKFCVTRI--------SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
           RN+   VT I        ++  S + +F L +G  Q + G + +AI+ + + +  +  Y 
Sbjct: 35  RNQDLLVTEIGVNPPKRPTRKTSGAGEFYL-QGQNQHSRGNFQAAIAAYSKSISLNSDYA 93

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
            A   RG A       E AI+D+ +++Q NP+  E +  RG ARA+LG+   AI+D ++A
Sbjct: 94  PAFKARGLAYFDLNNKERAINDYNQSLQINPNDPETYNYRGNARASLGDQKGAIEDYNEA 153

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           +   PN A+  + RG  +    + NAA+ED +  +++D+    AY   G A SS+G   K
Sbjct: 154 IRLSPNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRIDQNYSVAYNNRGNAYSSLGNTSK 213

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
           A   + +AI+L+  F  A+ +    +    +  +AL+ LQ+   I
Sbjct: 214 AIADYNQAIRLNPQFAPAYNNRGNAFASSGDKRRALQDLQKAATI 258



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/184 (27%), Positives = 91/184 (49%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            +AAI+ ++++I  N     A+K RG A   L     AI D +++L+  PN  +  + RG
Sbjct: 75  FQAAIAAYSKSISLNSDYAPAFKARGLAYFDLNNKERAINDYNQSLQINPNDPETYNYRG 134

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
                  D   A+ED +  ++L      A+   G + ++ G    A E + +AI++D+N+
Sbjct: 135 NARASLGDQKGAIEDYNEAIRLSPNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRIDQNY 194

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +    Y  L N+ KA+    Q + ++ +F+ AY+ RG      G  ++A++DL  
Sbjct: 195 SVAYNNRGNAYSSLGNTSKAIADYNQAIRLNPQFAPAYNNRGNAFASSGDKRRALQDLQK 254

Query: 611 GLGI 614
              I
Sbjct: 255 AATI 258



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 1/198 (0%)

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           AGE +  +GQ + + G    AI   SK++    + A     RG+  F   +   A+ D +
Sbjct: 59  AGEFY-LQGQNQHSRGNFQAAIAAYSKSISLNSDYAPAFKARGLAYFDLNNKERAINDYN 117

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++++  +   Y Y G A +S+G+ K A E + +AI+L  N+ EA+ +    +    N 
Sbjct: 118 QSLQINPNDPETYNYRGNARASLGDQKGAIEDYNEAIRLSPNYAEAFNNRGNSHAAQGNK 177

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
             ALE   Q + ID+ +S AY+ RG     LG   KAI D +  + ++P        R +
Sbjct: 178 NAALEDYTQAIRIDQNYSVAYNNRGNAYSSLGNTSKAIADYNQAIRLNPQFAPAYNNRGN 237

Query: 628 CYHAIGEYREAIKDYDAA 645
            + + G+ R A++D   A
Sbjct: 238 AFASSGDKRRALQDLQKA 255



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 60/121 (49%)

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           S G ++ A  A+ K+I L+ ++  A+      Y DL N E+A+    Q L I+    + Y
Sbjct: 71  SRGNFQAAIAAYSKSISLNSDYAPAFKARGLAYFDLNNKERAINDYNQSLQINPNDPETY 130

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + RG     LG  K AI+D +  + + P+  E    R + + A G    A++DY  A+ +
Sbjct: 131 NYRGNARASLGDQKGAIEDYNEAIRLSPNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRI 190

Query: 649 E 649
           +
Sbjct: 191 D 191



 Score = 45.8 bits (107), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 48/92 (52%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N + A+    + + ++  ++ A+  RGL    L   ++AI D +  L I+P++ E    
Sbjct: 73  GNFQAAIAAYSKSISLNSDYAPAFKARGLAYFDLNNKERAINDYNQSLQINPNDPETYNY 132

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           R +   ++G+ + AI+DY+ A+ L  +  E F
Sbjct: 133 RGNARASLGDQKGAIEDYNEAIRLSPNYAEAF 164



 Score = 40.8 bits (94), Expect = 3.8,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 11/127 (8%)

Query: 8   DSRYRLNKTHKTICEIDELVRVDSVMASAITAR-----IELAKLCSLRNWSKAIRILDSL 62
           ++R  L      I + +E +R+    A A   R      +  K  +L ++++AIRI    
Sbjct: 135 NARASLGDQKGAIEDYNEAIRLSPNYAEAFNNRGNSHAAQGNKNAALEDYTQAIRI---- 190

Query: 63  LAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
             Q+Y +    NR   YS L      I D ++A++L+P    AY  +G AF++ G K  A
Sbjct: 191 -DQNYSVA-YNNRGNAYSSLGNTSKAIADYNQAIRLNPQFAPAYNNRGNAFASSGDKRRA 248

Query: 123 LSVWEKG 129
           L   +K 
Sbjct: 249 LQDLQKA 255


>gi|73670356|ref|YP_306371.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
 gi|72397518|gb|AAZ71791.1| O-linked N-acetylglucosamine transferase [Methanosarcina barkeri
           str. Fusaro]
          Length = 397

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 143/297 (48%), Gaps = 8/297 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G +  A+  FD+ ++ DP   + L  +  A     + + A+  + +AI+ N    + W  
Sbjct: 64  GNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIKINAEDPDIWNN 123

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
              + + +G+  EA++   KALE  P+  +  + + +   +  D+ AA+E     ++ + 
Sbjct: 124 MAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAIEAYEKVLEENS 183

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           + K A+   G+AL  +G+Y +A  A+ KAI+LD NF EAW +       L +  +AL+  
Sbjct: 184 DYKEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHYKGVDMDSLGSYRQALKAY 243

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           Q+ + +D     A++  G+ L  L ++ +AIK     + I+  N +  Y +      +  
Sbjct: 244 QKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQR 303

Query: 635 YREAIKDYDAALDLELDSMEK-----FVLQCLAFYQKEIALY-TASKINSEFC--WF 683
           + EA + Y  A  L+ + +E      FVL  L  + + + +Y  A K+N E    WF
Sbjct: 304 FEEAAETYRKATQLDPEYLEAYSSLGFVLAQLRRFAESLEIYEQALKLNPEAADSWF 360



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 133/265 (50%), Gaps = 2/265 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++  ++QV  GKY  A+  +++ L+  P YP A  G+    +   + +AAI  + + ++ 
Sbjct: 124 MAFSLSQV--GKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAIEAYEKVLEE 181

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N    EAW  +G A   +G+  EAI    KA+E +PN A+  H +G+       +  A++
Sbjct: 182 NSDYKEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHYKGVDMDSLGSYRQALK 241

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                V+LD EN  A+  +G+ L ++ +Y +A +A  KAI+++    + W +       +
Sbjct: 242 AYQKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQM 301

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+A E  ++   +D  + +AY   G +L  L +  ++++     L ++P   +  + 
Sbjct: 302 QRFEEAAETYRKATQLDPEYLEAYSSLGFVLAQLRRFAESLEIYEQALKLNPEAADSWFG 361

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           +A C   +G   EA + Y  A++++
Sbjct: 362 KAVCLSFLGREEEAEEAYRKAVEID 386



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 117/227 (51%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y +AI  ++++L+E+  Y EA +G+G A     + + AI  + +AI+ +P+  EAW  
Sbjct: 166 GDYKAAIEAYEKVLEENSDYKEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHY 225

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G    +LG   +A++   K +E +P + D  +  GI     + ++ A++     ++++ 
Sbjct: 226 KGVDMDSLGSYRQALKAYQKTVELDPENDDAWNNMGIDLENLEKYDEAIKAFDKAIEINS 285

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           EN   +   G  LS +  +++A E + KA QLD  +LEA+  L      L    ++LE  
Sbjct: 286 ENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLEAYSSLGFVLAQLRRFAESLEIY 345

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           +Q L ++   + ++  + + L  LG+ ++A +     + IDP   E 
Sbjct: 346 EQALKLNPEAADSWFGKAVCLSFLGREEEAEEAYRKAVEIDPRYAEV 392



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 90/198 (45%), Gaps = 14/198 (7%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L+E G+      +FN A++     +++D +N         AL ++G+Y +A   + KAI+
Sbjct: 53  LNEYGLDFLSCGNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIK 112

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++    + W ++      +   ++A++  ++ L +   +  A++ + L L   G +K AI
Sbjct: 113 INAEDPDIWNNMAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAI 172

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL-------------ELDS 652
           +     L  +    E    +      +G+Y EAI  YD A++L             ++DS
Sbjct: 173 EAYEKVLEENSDYKEAWVGKGIALGQMGKYDEAIIAYDKAIELDPNFAEAWHYKGVDMDS 232

Query: 653 MEKFVLQCLAFYQKEIAL 670
           +  +  Q L  YQK + L
Sbjct: 233 LGSY-RQALKAYQKTVEL 249



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 7/174 (4%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GL   S G + +A +A  KAI++D + ++   +  Q  + +   ++AL   ++ + I+  
Sbjct: 57  GLDFLSCGNFNEAMKAFDKAIEIDPDNIDLLNNKAQALETVGKYDEALGFYEKAIKINAE 116

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
               ++     L  +G++ +A+K     L + P      Y +A      G+Y+ AI+ Y+
Sbjct: 117 DPDIWNNMAFSLSQVGKYDEAVKAYEKALELRPDYPNAWYGKALNLSQAGDYKAAIEAYE 176

Query: 644 AALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYW 697
             L+   D  E +V        K IAL    K +     +D   ++DP F E W
Sbjct: 177 KVLEENSDYKEAWV-------GKGIALGQMGKYDEAIIAYDKAIELDPNFAEAW 223



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDI-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L +L  + +AI+  D  +  + E  D+  N+ F  SQ++  +       KA QLDP  L+
Sbjct: 264 LENLEKYDEAIKAFDKAIEINSENADVWYNKGFTLSQMQRFEEAAETYRKATQLDPEYLE 323

Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
           AY   G   + L R  E+L ++E+ 
Sbjct: 324 AYSSLGFVLAQLRRFAESLEIYEQA 348


>gi|425457014|ref|ZP_18836720.1| Mom72 protein [Microcystis aeruginosa PCC 9807]
 gi|389801728|emb|CCI19133.1| Mom72 protein [Microcystis aeruginosa PCC 9807]
          Length = 260

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 10/207 (4%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG     LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYGELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL   PN  + L  R  V++  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           G++ +A E + KA+ L      DR F     +    Y      E AL    + L I+  F
Sbjct: 150 GKHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYDESLKINANF 205

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           ++AYH RGL  + LG  +KAI DL + 
Sbjct: 206 AEAYHNRGLTYYKLGNREKAIADLEAA 232



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 96/199 (48%), Gaps = 2/199 (1%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  LS      P  A   + RG+      D++ A+ D +  ++L+ ++  AY   G    
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYGEL 79

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+Y++A   + +A+ ++ N++ A G+    +      E A+E   + + ++  F+  +
Sbjct: 80  VLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREAIKDYDAAL 646
             RG     LG+H +AI+D +  L +  +  +    Y RA  Y+  G+   A++DYD +L
Sbjct: 140 IYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYDESL 199

Query: 647 DLELDSMEKFVLQCLAFYQ 665
            +  +  E +  + L +Y+
Sbjct: 200 KINANFAEAYHNRGLTYYK 218



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 2/192 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++  G Y+ AI+ F Q L+ +P   +A   RG       + E AI+D+T+A+  N
Sbjct: 39  NRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYGELVLGQYERAIADYTQALTIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   R        +   A++D +KA+    N AD    RG           A+ED
Sbjct: 99  PNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGKHLEAIED 158

Query: 506 LSACVKLD--KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +  + L   +     +    LA +  G+ + A   + ++++++ NF EA+ +    Y  
Sbjct: 159 YTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYDESLKINANFAEAYHNRGLTYYK 218

Query: 564 LANSEKALECLQ 575
           L N EKA+  L+
Sbjct: 219 LGNREKAIADLE 230



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG  ++  G+Y  AI+ + Q L  +P Y  AL  R       ++ EAA+ D T+A
Sbjct: 69  DAYYNRGYGELVLGQYERAIADYTQALTINPNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG+ +EAI+D +KAL  +       I + R +   +    
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D    +K++     AY   GL    +G  +KA
Sbjct: 189 EMALRDYDESLKINANFAEAYHNRGLTYYKLGNREKA 225



 Score = 41.6 bits (96), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + GK+  AI  + + L       +  I    A A+ R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYD 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL  A
Sbjct: 197 ESLKINANFAEAYHNRGLTYYKLGNREKAIADLEAA 232


>gi|440684051|ref|YP_007158846.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428681170|gb|AFZ59936.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 1176

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 121/271 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+ Q   G    A++ ++Q  K  P   E    +G      + L  AI+ + +A+   P
Sbjct: 308 QGLQQAKSGDLLGALAFYNQATKMQPEDHEYWFNQGLTLFHLQRLTEAIAAYDQALSLKP 367

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG      G+   AI    +A++F+P+  +    RG+   K      A+   
Sbjct: 368 DFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSRGLALLKLGLIWEAISSY 427

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +KL   ++  + Y G+AL+   +Y+ A  ++ +AI +  ++ E W         L  
Sbjct: 428 DQALKLQPHDQETWYYRGVALAVGEQYEDAIASYDRAIDIQPDYHEVWIDRGVVLFSLKR 487

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+E   Q L I      A + RG+ L  LG+ ++AI      + I P      Y +A
Sbjct: 488 WSEAIESWDQALSIQPDVYLACYNRGIALENLGRREEAITSYQQAITIKPDFHPAWYNQA 547

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                +  + EAI  YD+AL+++LD  E ++
Sbjct: 548 VALFYLDRFPEAIACYDSALEIKLDYWEAWL 578



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 124/290 (42%), Gaps = 17/290 (5%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           +A   +G  +A   +L  A++ + +A +  P   E W  +G     L    EAI    +A
Sbjct: 303 QAWFYQGLQQAKSGDLLGALAFYNQATKMQPEDHEYWFNQGLTLFHLQRLTEAIAAYDQA 362

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L  +P+     + RG +  +F DF+ A+      ++   + + A++  GLAL  +G   +
Sbjct: 363 LSLKPDFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSRGLALLKLGLIWE 422

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLA-----NSEKALECLQQVLYIDKRFSKAYHL 590
           A  ++ +A++L  +  E W     +Y+ +A       E A+    + + I   + + +  
Sbjct: 423 AISSYDQALKLQPHDQETW-----YYRGVALAVGEQYEDAIASYDRAIDIQPDYHEVWID 477

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RG++L  L +  +AI+     L I P      Y R      +G   EAI  Y  A+ ++ 
Sbjct: 478 RGVVLFSLKRWSEAIESWDQALSIQPDVYLACYNRGIALENLGRREEAITSYQQAITIKP 537

Query: 651 DSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           D          A+Y + +AL+   +       +D   +I   + E W  R
Sbjct: 538 DFHP-------AWYNQAVALFYLDRFPEAIACYDSALEIKLDYWEAWLGR 580



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 9/226 (3%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    ++ S+  DF     +RG      G + +AI+ FDQ ++  P Y EA   RG A 
Sbjct: 355 AIAAYDQALSLKPDFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSRGLAL 414

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSAD 484
                +  AIS + +A++  P   E W  RG A  A+GE  E AI    +A++ +P+  +
Sbjct: 415 LKLGLIWEAISSYDQALKLQPHDQETWYYRGVA-LAVGEQYEDAIASYDRAIDIQPDYHE 473

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
           +  +RG+V F  K ++ A+E     + +  +   A    G+AL ++G  ++A  ++ +AI
Sbjct: 474 VWIDRGVVLFSLKRWSEAIESWDQALSIQPDVYLACYNRGIALENLGRREEAITSYQQAI 533

Query: 545 QLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +  +F  AW +  +  FY D     +A+ C    L I   + +A+
Sbjct: 534 TIKPDFHPAWYNQAVALFYLD--RFPEAIACYDSALEIKLDYWEAW 577



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 2/178 (1%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A     +G+   K  D   A+   +   K+  E+   +   GL L  +    +A  A+
Sbjct: 300 NQAQAWFYQGLQQAKSGDLLGALAFYNQATKMQPEDHEYWFNQGLTLFHLQRLTEAIAAY 359

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +A+ L  +F +AW +      +  + + A+    Q +     + +A+  RGL L  LG 
Sbjct: 360 DQALSLKPDFHKAWYNRGGILGEFGDFDNAIASFDQAIQFKPDYQEAWSSRGLALLKLGL 419

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE-YREAIKDYDAALDLELDSMEKFV 657
             +AI      L + P + E  Y R     A+GE Y +AI  YD A+D++ D  E ++
Sbjct: 420 IWEAISSYDQALKLQPHDQETWYYRGVAL-AVGEQYEDAIASYDRAIDIQPDYHEVWI 476


>gi|428774009|ref|YP_007165797.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
 gi|428688288|gb|AFZ48148.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
          Length = 724

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 118/243 (48%), Gaps = 14/243 (5%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q   E+AI  +T A++ NP   +A+  RG   A LG   +AI D ++ +E +P   D  +
Sbjct: 447 QENYESAIEQYTLAVEINPDFADAYYNRGLTYADLGLDDQAIADYTRTIEIDPEYLDAYN 506

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RGI+    +++  A+ D    +  D +   A+  LG+A  S+G ++ A  ++ +AI+L+
Sbjct: 507 NRGIIFANLQEYEKAITDYMKVISSDPDYVLAHNNLGVAYDSLGRFRDAIASYTRAIELN 566

Query: 548 RNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
             +  A+       G L Q+ + + +  +A+E        +   +  Y  RG     LG 
Sbjct: 567 PGYGLAYNNRAISHGSLEQYNEAIRDHTRAIE-------FNFVSADVYFRRGNAYRNLGS 619

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
           H+ AI D +  + ++ S+ +    R   ++++G+ + AI DY  A++L  D    F    
Sbjct: 620 HESAIADYTRAIELEASHADAYNNRGISHYSLGQNQRAIADYTRAIELIPDYAHSFYNLG 679

Query: 661 LAF 663
           L +
Sbjct: 680 LVY 682



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 98/191 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI   N  +Y  AI+ + +++  DP Y  A    G A         AI+ +T AI+ N
Sbjct: 507 NRGIIFANLQEYEKAITDYMKVISSDPDYVLAHNNLGVAYDSLGRFRDAIASYTRAIELN 566

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P  G A+  R  +  +L +  EAI+D ++A+EF   SAD+   RG          +A+ D
Sbjct: 567 PGYGLAYNNRAISHGSLEQYNEAIRDHTRAIEFNFVSADVYFRRGNAYRNLGSHESAIAD 626

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L+  +  AY   G++  S+G+ ++A   + +AI+L  ++  ++ +L   Y+D  
Sbjct: 627 YTRAIELEASHADAYNNRGISHYSLGQNQRAIADYTRAIELIPDYAHSFYNLGLVYRDQG 686

Query: 566 NSEKALECLQQ 576
           +   ALE L Q
Sbjct: 687 DINNALEHLGQ 697



 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 4/119 (3%)

Query: 357 ETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE 416
           E  NEA R+     TR  +   +S D    RG A  N G + SAI+ + + ++ +  + +
Sbjct: 584 EQYNEAIRDH----TRAIEFNFVSADVYFRRGNAYRNLGSHESAIADYTRAIELEASHAD 639

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           A   RG +     + + AI+D+T AI+  P    ++   G      G+   A++ L +A
Sbjct: 640 AYNNRGISHYSLGQNQRAIADYTRAIELIPDYAHSFYNLGLVYRDQGDINNALEHLGQA 698


>gi|449126815|ref|ZP_21763092.1| hypothetical protein HMPREF9733_00495, partial [Treponema denticola
           SP33]
 gi|448945453|gb|EMB26324.1| hypothetical protein HMPREF9733_00495, partial [Treponema denticola
           SP33]
          Length = 299

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 119/249 (47%), Gaps = 1/249 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  + + ++ DP Y EA + RG       + EAA+ DF  AI+ NP    A+  +G   
Sbjct: 23  AIYYYTKAIETDPYYIEAYLNRGVTYLNMGKKEAALHDFNTAIKLNPKEDSAYYWKGLVL 82

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
           A +G++  A  +L+KA+     +    + R  + +  +++  ++ DL+  V L+    + 
Sbjct: 83  AKIGKNGAARDNLNKAIALNNKNDQYYYTRARIYYGMEEYVHSLNDLNTAVNLNPNAANL 142

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G+    + +Y  A + + K I LD + L ++  L   Y       KA+E    +L 
Sbjct: 143 YETRGIVYQVLEKYDNAIKDYKKTISLDSHNLTSYKGLVLIYAAKKEYPKAIEAADILLE 202

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I   +   +++R  L   LGQ  KA+ D +  + + P      Y+R   Y  + EY +AI
Sbjct: 203 IKSDWL-IFNVRAKLFFELGQCDKALDDCNKAIKLYPYIAYSYYMRGWIYLQLKEYEKAI 261

Query: 640 KDYDAALDL 648
           KD+D A+ L
Sbjct: 262 KDFDKAISL 270



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 133/269 (49%), Gaps = 3/269 (1%)

Query: 352 WDMLKETSNEAKRNKK--FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
           ++M   T+ E K   +  +  T+  ++    ++  L+RG+  +N GK  +A+  F+  +K
Sbjct: 7   FNMAGNTAKEKKDGTRAIYYYTKAIETDPYYIEAYLNRGVTYLNMGKKEAALHDFNTAIK 66

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
            +P    A   +G   A   +  AA  +  +AI  N    + +  R +    + E V ++
Sbjct: 67  LNPKEDSAYYWKGLVLAKIGKNGAARDNLNKAIALNNKNDQYYYTRARIYYGMEEYVHSL 126

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
            DL+ A+   PN+A++   RGIV    + ++ A++D    + LD  N ++Y  L L  ++
Sbjct: 127 NDLNTAVNLNPNAANLYETRGIVYQVLEKYDNAIKDYKKTISLDSHNLTSYKGLVLIYAA 186

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
             EY KA EA    +++  ++L  +    + + +L   +KAL+   + + +    + +Y+
Sbjct: 187 KKEYPKAIEAADILLEIKSDWL-IFNVRAKLFFELGQCDKALDDCNKAIKLYPYIAYSYY 245

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           +RG +   L +++KAIKD    + + P +
Sbjct: 246 MRGWIYLQLKEYEKAIKDFDKAISLAPQD 274



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 89/205 (43%)

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S  E +   G       +   AI   +KA+E +P   +    RG+         AA+ D 
Sbjct: 2   SQAEYFNMAGNTAKEKKDGTRAIYYYTKAIETDPYYIEAYLNRGVTYLNMGKKEAALHDF 61

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +KL+ +  SAY + GL L+ IG+   A +   KAI L+    + +    + Y  +  
Sbjct: 62  NTAIKLNPKEDSAYYWKGLVLAKIGKNGAARDNLNKAIALNNKNDQYYYTRARIYYGMEE 121

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              +L  L   + ++   +  Y  RG++   L ++  AIKD    + +D  N+       
Sbjct: 122 YVHSLNDLNTAVNLNPNAANLYETRGIVYQVLEKYDNAIKDYKKTISLDSHNLTSYKGLV 181

Query: 627 SCYHAIGEYREAIKDYDAALDLELD 651
             Y A  EY +AI+  D  L+++ D
Sbjct: 182 LIYAAKKEYPKAIEAADILLEIKSD 206


>gi|449125237|ref|ZP_21761539.1| hypothetical protein HMPREF9723_01583 [Treponema denticola OTK]
 gi|448939206|gb|EMB20123.1| hypothetical protein HMPREF9723_01583 [Treponema denticola OTK]
          Length = 338

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 68/268 (25%), Positives = 126/268 (47%), Gaps = 1/268 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  + + ++ DP Y EA + RG    +  E E A++DF   I+ NP   +A+  +G   
Sbjct: 59  AIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKALADFDRIIELNPKEDKAYYFKGLLF 118

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G   +AI++L+ A+       +    R     +  ++  A ED++  +KL+ ++   
Sbjct: 119 NDAGNYNKAIKNLNTAINLNDKDYEYYEARSRAYEQNNEYEKAFEDINTAIKLNPKSAKL 178

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G           A      AI+LD N +  +  L   Y ++  + +A E + +++ 
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIAIKLDSNDIWPYNGLLFIYLEMDKNNEAFEIVNKMIK 238

Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
           +   +    Y +RG L    GQ+K+AI+D ++G+ + P N     +R   Y  + EY++A
Sbjct: 239 MKPSWIGILYGIRGTLFSMRGQYKEAIEDCNTGIRMYPHNASLYNIRGKIYFDLKEYKKA 298

Query: 639 IKDYDAALDLELDSMEKFVLQCLAFYQK 666
           IKD+D A+   L++        + + QK
Sbjct: 299 IKDFDMAIKFALENQNTEKQDAIEYKQK 326



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 3/149 (2%)

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           K+N S   Y  +A ++  E K    A   + KAI+ D  ++EA+ +  + Y  +   EKA
Sbjct: 34  KQNYSQAEYFNIAGNTAKEKKDRTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKA 93

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           L    +++ ++ +  KAY+ +GLL +  G + KAIK+L++ + ++  + E    R+  Y 
Sbjct: 94  LADFDRIIELNPKEDKAYYFKGLLFNDAGNYNKAIKNLNTAINLNDKDYEYYEARSRAYE 153

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQ 659
              EY +A +D + A+ L   S + + L+
Sbjct: 154 QNNEYEKAFEDINTAIKLNPKSAKLYNLR 182



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 78/177 (44%)

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + N S  E +   G       +   AI   +KA+E +P   +    RG + +   +   A
Sbjct: 34  KQNYSQAEYFNIAGNTAKEKKDRTRAIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKA 93

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D    ++L+ +   AY + GL  +  G Y KA +    AI L+    E +   ++ Y+
Sbjct: 94  LADFDRIIELNPKEDKAYYFKGLLFNDAGNYNKAIKNLNTAINLNDKDYEYYEARSRAYE 153

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
                EKA E +   + ++ + +K Y+LRG L     +   AI D    + +D ++I
Sbjct: 154 QNNEYEKAFEDINTAIKLNPKSAKLYNLRGRLHEHFERTDDAINDFKIAIKLDSNDI 210



 Score = 40.4 bits (93), Expect = 5.5,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 49/97 (50%)

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+    + +  D  + +AY  RG + + + +H+KA+ D    + ++P   +  Y +   
Sbjct: 58  RAIYYYTKAIEADPAYIEAYLNRGEMYYYVNEHEKALADFDRIIELNPKEDKAYYFKGLL 117

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           ++  G Y +AIK+ + A++L     E +  +  A+ Q
Sbjct: 118 FNDAGNYNKAIKNLNTAINLNDKDYEYYEARSRAYEQ 154


>gi|414075842|ref|YP_006995160.1| hypothetical protein ANA_C10547 [Anabaena sp. 90]
 gi|413969258|gb|AFW93347.1| TPR repeat-containing protein [Anabaena sp. 90]
          Length = 404

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 122/236 (51%), Gaps = 3/236 (1%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E  + +G  +  +R+ + AI+  TEAI+ +P   EA+ RRG A + +  + +AI DL K+
Sbjct: 146 EEFLKQGNDKLDKRDSQGAINTLTEAIRLDPKFAEAYSRRGVAYSNIENNQKAIDDLQKS 205

Query: 476 LEF---EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           ++    + N++   H++G +    KD+  A+   +  + LD  +   Y   G+A  S+G+
Sbjct: 206 VKLFATQGNNSASKHDQGRIRDYLKDYQGAIALYNESINLDPHDARTYQNRGIAHYSLGD 265

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
            + A     +AI+++ NF  A+        DL + + A+    Q + I+  F+ AY  RG
Sbjct: 266 KQAAIADFNQAIKINPNFAIAYHQRGNSRSDLGDKQAAIADFNQAIKINPNFAIAYKNRG 325

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            + + LG  + AI D +  + I+P   +  ++    ++ +G+ + AI D+  A+ L
Sbjct: 326 YIHYELGDKQAAIADYTQAIKINPKYSKAYHVLGYIHYDLGDKQAAIADFQQAVKL 381



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 81/150 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  + G   +AI+ F+Q +K +P +  A   RG +R+   + +AAI+DF +AI+ N
Sbjct: 255 NRGIAHYSLGDKQAAIADFNQAIKINPNFAIAYHQRGNSRSDLGDKQAAIADFNQAIKIN 314

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+K RG     LG+   AI D ++A++  P  +   H  G +++   D  AA+ D
Sbjct: 315 PNFAIAYKNRGYIHYELGDKQAAIADYTQAIKINPKYSKAYHVLGYIHYDLGDKQAAIAD 374

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKK 535
               VKL ++ K     L +A   I E +K
Sbjct: 375 FQQAVKLYQQQKGNEELLKIAQDRIRELQK 404



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 82/150 (54%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI+++++ +  DP        RG A     + +AAI+DF +AI+ NP+   A+ +RG
Sbjct: 232 YQGAIALYNESINLDPHDARTYQNRGIAHYSLGDKQAAIADFNQAIKINPNFAIAYHQRG 291

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            +R+ LG+   AI D ++A++  PN A     RG ++++  D  AA+ D +  +K++ + 
Sbjct: 292 NSRSDLGDKQAAIADFNQAIKINPNFAIAYKNRGYIHYELGDKQAAIADYTQAIKINPKY 351

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
             AY  LG     +G+ + A     +A++L
Sbjct: 352 SKAYHVLGYIHYDLGDKQAAIADFQQAVKL 381



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 108/219 (49%), Gaps = 7/219 (3%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI-----QSNPSAGEAWK 453
            AI+   + ++ DP + EA   RG A +     + AI D  +++     Q N SA +   
Sbjct: 163 GAINTLTEAIRLDPKFAEAYSRRGVAYSNIENNQKAIDDLQKSVKLFATQGNNSASK--H 220

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            +G+ R  L +   AI   ++++  +P+ A     RGI ++   D  AA+ D +  +K++
Sbjct: 221 DQGRIRDYLKDYQGAIALYNESINLDPHDARTYQNRGIAHYSLGDKQAAIADFNQAIKIN 280

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
                AY   G + S +G+ + A     +AI+++ NF  A+ +    + +L + + A+  
Sbjct: 281 PNFAIAYHQRGNSRSDLGDKQAAIADFNQAIKINPNFAIAYKNRGYIHYELGDKQAAIAD 340

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
             Q + I+ ++SKAYH+ G + + LG  + AI D    +
Sbjct: 341 YTQAIKINPKYSKAYHVLGYIHYDLGDKQAAIADFQQAV 379



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 104/257 (40%), Gaps = 57/257 (22%)

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           KA EF     D L +R        D   A+  L+  ++LD +   AY+  G+A S+I   
Sbjct: 144 KAEEFLKQGNDKLDKR--------DSQGAINTLTEAIRLDPKFAEAYSRRGVAYSNIENN 195

Query: 534 KKAEEAHLKAIQL----------------DRNFLEAW--------------GHLTQFYQD 563
           +KA +   K+++L                 R++L+ +               H  + YQ+
Sbjct: 196 QKAIDDLQKSVKLFATQGNNSASKHDQGRIRDYLKDYQGAIALYNESINLDPHDARTYQN 255

Query: 564 -------LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                  L + + A+    Q + I+  F+ AYH RG     LG  + AI D +  + I+P
Sbjct: 256 RGIAHYSLGDKQAAIADFNQAIKINPNFAIAYHQRGNSRSDLGDKQAAIADFNQAIKINP 315

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-VL-----------QCLAFY 664
           +       R   ++ +G+ + AI DY  A+ +     + + VL             +A +
Sbjct: 316 NFAIAYKNRGYIHYELGDKQAAIADYTQAIKINPKYSKAYHVLGYIHYDLGDKQAAIADF 375

Query: 665 QKEIALYTASKINSEFC 681
           Q+ + LY   K N E  
Sbjct: 376 QQAVKLYQQQKGNEELL 392


>gi|427708152|ref|YP_007050529.1| hypothetical protein Nos7107_2781 [Nostoc sp. PCC 7107]
 gi|427360657|gb|AFY43379.1| Tetratricopeptide TPR_1 repeat-containing protein [Nostoc sp. PCC
           7107]
          Length = 539

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 38/262 (14%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG++    G YA AI+ + Q ++ +    +  I RG A     +  AAI D+T+AI+ NP
Sbjct: 285 RGLSYYQLGDYAEAIADYSQAIQINLNDAKFYIKRGLANYQLGDYIAAIDDYTQAIRLNP 344

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   A+K R  AR+ LG++  AI+D ++AL+  PN A     RG+  +    F    +  
Sbjct: 345 NMAVAYKNRADARSHLGDNQGAIEDYTQALKINPNYAITYKNRGMSRY----FLGYQQSF 400

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +K++ ++  AY   G A + IG+Y                                 
Sbjct: 401 TKAIKINPQDAIAYKNRGNARADIGDY--------------------------------- 427

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E A++   QV+ I+   + AY+ RG   + +G +  A +D +  + I+P+  +  Y R 
Sbjct: 428 -EGAIDDYTQVIAINPHDAHAYYNRGNARYDMGDNAGAFEDYTQAIKINPNYADAYYNRG 486

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
           +    IG+ +EAI D+  A++L
Sbjct: 487 NVQSEIGDQQEAIADFQKAVEL 508



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 4/196 (2%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           F + RG+A    G Y +AI  + Q ++ +P    A   R  AR+   + + AI D+T+A+
Sbjct: 315 FYIKRGLANYQLGDYIAAIDDYTQAIRLNPNMAVAYKNRADARSHLGDNQGAIEDYTQAL 374

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + NP+    +K RG +R  LG      Q  +KA++  P  A     RG       D+  A
Sbjct: 375 KINPNYAITYKNRGMSRYFLGYQ----QSFTKAIKINPQDAIAYKNRGNARADIGDYEGA 430

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           ++D +  + ++  +  AY   G A   +G+   A E + +AI+++ N+ +A+ +      
Sbjct: 431 IDDYTQVIAINPHDAHAYYNRGNARYDMGDNAGAFEDYTQAIKINPNYADAYYNRGNVQS 490

Query: 563 DLANSEKALECLQQVL 578
           ++ + ++A+   Q+ +
Sbjct: 491 EIGDQQEAIADFQKAV 506



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 90/180 (50%), Gaps = 4/180 (2%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           GE  +AI   S+AL+   N A+I ++RG+  ++  D+  A+ D S  ++++  +   Y  
Sbjct: 259 GEYTDAIAHYSQALKLYQNDAEIYYQRGLSYYQLGDYAEAIADYSQAIQINLNDAKFYIK 318

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            GLA   +G+Y  A + + +AI+L+ N   A+ +       L +++ A+E   Q L I+ 
Sbjct: 319 RGLANYQLGDYIAAIDDYTQAIRLNPNMAVAYKNRADARSHLGDNQGAIEDYTQALKINP 378

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
            ++  Y  RG+  + LG  +      +  + I+P +      R +    IG+Y  AI DY
Sbjct: 379 NYAITYKNRGMSRYFLGYQQS----FTKAIKINPQDAIAYKNRGNARADIGDYEGAIDDY 434



 Score = 43.9 bits (102), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 37/67 (55%)

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
           G++  AI   S  L +  ++ E  Y R   Y+ +G+Y EAI DY  A+ + L+  + ++ 
Sbjct: 259 GEYTDAIAHYSQALKLYQNDAEIYYQRGLSYYQLGDYAEAIADYSQAIQINLNDAKFYIK 318

Query: 659 QCLAFYQ 665
           + LA YQ
Sbjct: 319 RGLANYQ 325


>gi|220906220|ref|YP_002481531.1| hypothetical protein Cyan7425_0783 [Cyanothece sp. PCC 7425]
 gi|219862831|gb|ACL43170.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 542

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 123/280 (43%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           IA+  +  Y  AI+ FD+ ++ +P    A   RG AR   ++   A++DF  AI+ NP  
Sbjct: 261 IAKYRQQDYRGAIADFDRAIRLNPQLDLAYSNRGLARYGLQDYRGAVADFDRAIRLNPQL 320

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
             A+  RG AR  L +   A  D  +A+   P  AD  + RG V  + +D+  AV D   
Sbjct: 321 DLAYYNRGLARYGLQDYRGARADFDQAIRLNPKDADAYNNRGSVRRELQDYRGAVADFDR 380

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++L+ +   AY   G+    + +Y  A     +AI+L+    +A+ +       L +  
Sbjct: 381 AIRLNPKFDLAYYNRGITRRKLQDYGGALADFDQAIRLNPRDADAYNNRGFVRYGLQDYG 440

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            AL    Q + ++   +  Y+ RG + +GL  ++ AI D    + + P      Y R   
Sbjct: 441 GALADFDQAIRLNPEDADIYNNRGFVRYGLQDYRGAIADFDQAIRLQPDLALAYYHRGLA 500

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
                E R A+ DY  A +L        V Q      +EI
Sbjct: 501 RAQAEERRAALPDYQRAAELAQAQGNDQVYQLAIMQLREI 540



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 64/127 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI +     Y  A++ FDQ ++ +P   +A   RG  R   ++   A++DF +AI+ N
Sbjct: 394 NRGITRRKLQDYGGALADFDQAIRLNPRDADAYNNRGFVRYGLQDYGGALADFDQAIRLN 453

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   + +  RG  R  L +   AI D  +A+  +P+ A   + RG+   + ++  AA+ D
Sbjct: 454 PEDADIYNNRGFVRYGLQDYRGAIADFDQAIRLQPDLALAYYHRGLARAQAEERRAALPD 513

Query: 506 LSACVKL 512
                +L
Sbjct: 514 YQRAAEL 520



 Score = 43.5 bits (101), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 3/142 (2%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE 68
           +R +L      + + D+ +R++   A A   R  +     L+++  A+   D  +  + E
Sbjct: 398 TRRKLQDYGGALADFDQAIRLNPRDADAYNNRGFVR--YGLQDYGGALADFDQAIRLNPE 455

Query: 69  IQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
             DI N R F    L+ ++  I D D+A++L P L  AY  +G A +    +  AL  ++
Sbjct: 456 DADIYNNRGFVRYGLQDYRGAIADFDQAIRLQPDLALAYYHRGLARAQAEERRAALPDYQ 515

Query: 128 KGYEHALHQSADLKQFLELEEL 149
           +  E A  Q  D    L + +L
Sbjct: 516 RAAELAQAQGNDQVYQLAIMQL 537


>gi|189346021|ref|YP_001942550.1| hypothetical protein Clim_0478 [Chlorobium limicola DSM 245]
 gi|189340168|gb|ACD89571.1| Tetratricopeptide TPR_2 repeat protein [Chlorobium limicola DSM
           245]
          Length = 343

 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 113/232 (48%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + + A + +T  +  NP + EA+  RG  +AA G+   A+ D S+AL+ +P+ A   + R
Sbjct: 41  DFQGASALYTAVLSGNPRSAEAYNNRGLCKAASGDVTGAVADYSEALKLDPSLAAASNNR 100

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+   K   ++ AV D +  ++++      Y  LGLA  ++G+   A +    A+ L   
Sbjct: 101 GLAMAKIGKYHEAVLDYNQALRINAVLPEVYNNLGLARIALGDQSGALDDFNTALALKPF 160

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           + EA  +     Q L+   +AL   QQV+     +++ Y    L    +G HK A+ D +
Sbjct: 161 YPEALFNRGCARQKLSEHREALRDFQQVISFRSGYAEPYFYAALSRSAMGDHKGALVDYT 220

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             + I PS  E    RA      G+YR A+ DYD  + L+ D+ E +  + L
Sbjct: 221 KAIAISPSYAEAFAGRALAKIRSGDYRGALDDYDTVIGLQSDNPELYYNRAL 272



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 1/254 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    A++ + + LK DP    A   RG A A   +   A+ D+ +A++ N
Sbjct: 65  NRGLCKAASGDVTGAVADYSEALKLDPSLAAASNNRGLAMAKIGKYHEAVLDYNQALRIN 124

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               E +   G AR ALG+   A+ D + AL  +P   + L  RG    K  +   A+ D
Sbjct: 125 AVLPEVYNNLGLARIALGDQSGALDDFNTALALKPFYPEALFNRGCARQKLSEHREALRD 184

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +         Y Y  L+ S++G++K A   + KAI +  ++ EA+           
Sbjct: 185 FQQVISFRSGYAEPYFYAALSRSAMGDHKGALVDYTKAIAISPSYAEAFAGRALAKIRSG 244

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +   AL+    V+ +     + Y+ R L+   L  +  A  D S  L  +    E  +LR
Sbjct: 245 DYRGALDDYDTVIGLQSDNPELYYNRALVKVKLSDYPGAEIDCSLALERNKVYAEAFFLR 304

Query: 626 ASCYHAIGEYREAI 639
                 +G  RE +
Sbjct: 305 GIVRSELGN-REGM 317


>gi|428312179|ref|YP_007123156.1| hypothetical protein Mic7113_4045 [Microcoleus sp. PCC 7113]
 gi|428253791|gb|AFZ19750.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
          Length = 436

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 133/299 (44%), Gaps = 28/299 (9%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+ +V +G    AI  FD  L+ +P + EA   RG  R    + + AI D+T A+Q N
Sbjct: 7   NQGLEKVLQGNLEGAIQDFDHALQINPHFTEAYYRRGVVRFDLGDRQGAIEDYTLALQLN 66

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
             + E++  R  A  AL E  +A+ D+   L  +PN       +G    +  D  AA+  
Sbjct: 67  CESIESYFGRALAWLALSEPQKALADVKHILNLKPNHTPAYSLQGTAYRQLGDTQAAIAS 126

Query: 506 LSACVKLDKENKSAY--------------------------TYLGLALSSI--GEYKKAE 537
           L    +L  E K                              +L  ALS I  G+Y+ A 
Sbjct: 127 LKNAAQLYLEQKDTVNCRRCLESISQMQATQRRAVMVTEIANFLESALSKIKQGQYRAAL 186

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           E     +Q++    +A  +    Y  L + ++A+  L Q L ++ + ++  + RGL+   
Sbjct: 187 EDLNWLLQVEPRHAQALCYRGIVYSKLGHYQEAMRDLAQALQLNPQDAQVLNQRGLVRLE 246

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           LG ++ AI+D S  +  +P NIE    R   Y    ++ +AI DY  AL L+ D  E +
Sbjct: 247 LGDYRGAIEDFSQLIQSNPHNIEAYINRGHAYRKYKDFSQAIADYSTALSLKPDHAELY 305



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 79/152 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L   ++++ +G+Y +A+   + +L+ +P + +AL  RG   +     + A+ D  +A+Q 
Sbjct: 170 LESALSKIKQGQYRAALEDLNWLLQVEPRHAQALCYRGIVYSKLGHYQEAMRDLAQALQL 229

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   +   +RG  R  LG+   AI+D S+ ++  P++ +    RG    K+KDF+ A+ 
Sbjct: 230 NPQDAQVLNQRGLVRLELGDYRGAIEDFSQLIQSNPHNIEAYINRGHAYRKYKDFSQAIA 289

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           D S  + L  ++   Y +     S + +Y+ A
Sbjct: 290 DYSTALSLKPDHAELYCHRAAVRSDLTDYQGA 321



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 2/157 (1%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q +  AA+ D    +Q  P   +A   RG   + LG   EA++DL++AL+  P  A +L+
Sbjct: 179 QGQYRAALEDLNWLLQVEPRHAQALCYRGIVYSKLGHYQEAMRDLAQALQLNPQDAQVLN 238

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           +RG+V  +  D+  A+ED S  ++ +  N  AY   G A     ++ +A   +  A+ L 
Sbjct: 239 QRGLVRLELGDYRGAIEDFSQLIQSNPHNIEAYINRGHAYRKYKDFSQAIADYSTALSLK 298

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQV--LYIDK 582
            +  E + H      DL + + A++  Q    +Y+D+
Sbjct: 299 PDHAELYCHRAAVRSDLTDYQGAVDDYQSAANIYLDQ 335



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 120/303 (39%), Gaps = 68/303 (22%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S++    R +A +   +   A++    IL   P +  A   +GTA     + +AAI+   
Sbjct: 69  SIESYFGRALAWLALSEPQKALADVKHILNLKPNHTPAYSLQGTAYRQLGDTQAAIASLK 128

Query: 440 EAIQ---------------SNPSAGEAWKRRGQARAALGESVE-------------AIQD 471
            A Q                + S  +A +RR      +   +E             A++D
Sbjct: 129 NAAQLYLEQKDTVNCRRCLESISQMQATQRRAVMVTEIANFLESALSKIKQGQYRAALED 188

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
           L+  L+ EP  A  L  RGIV  K   +  A+ DL+  ++L+ ++       GL    +G
Sbjct: 189 LNWLLQVEPRHAQALCYRGIVYSKLGHYQEAMRDLAQALQLNPQDAQVLNQRGLVRLELG 248

Query: 532 EYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           +Y+ A E   + IQ + + +EA+   GH  + Y+D +                       
Sbjct: 249 DYRGAIEDFSQLIQSNPHNIEAYINRGHAYRKYKDFS----------------------- 285

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
                         +AI D S+ L + P + E    RA+    + +Y+ A+ DY +A ++
Sbjct: 286 --------------QAIADYSTALSLKPDHAELYCHRAAVRSDLTDYQGAVDDYQSAANI 331

Query: 649 ELD 651
            LD
Sbjct: 332 YLD 334



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 55/101 (54%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N E A++     L I+  F++AY+ RG++   LG  + AI+D +  L ++  +IE  + 
Sbjct: 16  GNLEGAIQDFDHALQINPHFTEAYYRRGVVRFDLGDRQGAIEDYTLALQLNCESIESYFG 75

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           RA  + A+ E ++A+ D    L+L+ +    + LQ  A+ Q
Sbjct: 76  RALAWLALSEPQKALADVKHILNLKPNHTPAYSLQGTAYRQ 116


>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
 gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
          Length = 1711

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 121/262 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +GI      +Y  A  IF ++LK DP   EA   +G A      L  AI  F EAI+ +P
Sbjct: 138 KGILLSELSRYEEAEKIFSKVLKLDPENREAWFRKGFALVQLLRLNEAIKAFEEAIKIDP 197

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S  EAW  R  A   L    EA++     L   P+  DI + R +   K +++  AV+  
Sbjct: 198 SYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRALALLKLQNYAEAVQSF 257

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +   +LD ENK A+   GL L+  G++++A  A  K ++ D +F EA          L  
Sbjct: 258 ARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLLEYDPDFTEAQKLRGTVLAGLGR 317

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+AL  L++ L  +      +  +GL+L   G+ + AI    +   ++P N  C     
Sbjct: 318 FEEALGPLEKSLEKEPENYNLWLQKGLILLDTGKLEPAIDAFENAARLNPDNETCWMNMG 377

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
              +++  Y EA++ +   L L
Sbjct: 378 FALYSLERYEEALEAFKEGLRL 399



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 130/270 (48%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   SR +A +    YA A+  F ++ + DP   +A + +G   A   + E A++   + 
Sbjct: 235 DIWYSRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKL 294

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++ +P   EA K RG   A LG   EA+  L K+LE EP + ++  ++G++         
Sbjct: 295 LEYDPDFTEAQKLRGTVLAGLGRFEEALGPLEKSLEKEPENYNLWLQKGLILLDTGKLEP 354

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A++      +L+ +N++ +  +G AL S+  Y++A EA  + ++L+      W       
Sbjct: 355 AIDAFENAARLNPDNETCWMNMGFALYSLERYEEALEAFKEGLRLNPYLETGWNRKGIVL 414

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             L  + +ALE  ++ + +   F  A+  RGLLL    + +KA +  +  L I+P +I+ 
Sbjct: 415 GKLGKTGEALEAFEEAIKLRPDFEDAWKNRGLLLFASEECEKAEEAFAEVLKINPEDIDS 474

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELD 651
           LY R      +G    A++  +  + L  D
Sbjct: 475 LYNRGISLLKLGRKETALEYLEKVVSLRPD 504



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 136/287 (47%), Gaps = 19/287 (6%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPM-----YPEALIGRGTARAFQRELEAAISDFTEAI 442
            G++Q+  GKY  A   F+++L+++PM     Y   L+ RG  +      E A+  F  A+
Sbjct: 1288 GLSQLKTGKYEDACDTFEKVLEKNPMAADIWYLSGLVMRGLDQN-----EDAVEAFNRAL 1342

Query: 443  QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
            +  P    A +++G A  +L    EA    S  LE  P +AD+L+ R + +FK  +F  A
Sbjct: 1343 EIKPDLRAAQEQKGLALLSLCRYEEARDAFSSVLEESPENADVLYNRAVASFKTLNFEDA 1402

Query: 503  VEDLSACVKLDKENKSAYT----YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
             +DL   V L   +   YT     LG+A   + +Y++A +A    ++ +    EA  ++ 
Sbjct: 1403 AKDLEK-VLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEHEEALYNMA 1461

Query: 559  QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                +L   E+A    +Q+L       ++ +  GL L  L   K+A+K        +P N
Sbjct: 1462 LVLFNLEEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEKAALFNPKN 1521

Query: 619  IECLYLRASCYHAIGEYREAIKDYDAALDLELDSME----KFVLQCL 661
             E LY  A+    +   +E++  +D  L++  D+++    K V+ C+
Sbjct: 1522 EEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCM 1568



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/332 (23%), Positives = 147/332 (44%), Gaps = 42/332 (12%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+  F++ L+ +P   EA   +G   A   + ++A+  F    + NP    A +++
Sbjct: 45  RYEEALENFERALEINPKDSEACYAKGLVLAKLEKYDSALECFDSLTRENPRNENALEQK 104

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
               A +G+   A++ L   L+  P +   L+ +GI+  +   +  A +  S  +KLD E
Sbjct: 105 CLLLAKIGKKDLALEALEDFLKKYPANEAALYHKGILLSELSRYEEAEKIFSKVLKLDPE 164

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-------------------- 555
           N+ A+   G AL  +    +A +A  +AI++D ++ EAW                     
Sbjct: 165 NREAWFRKGFALVQLLRLNEAIKAFEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFD 224

Query: 556 HLTQFYQD--------------LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
            + + Y D              L N  +A++   +V  +D     A+  +GLLL   G+H
Sbjct: 225 SMLRIYPDVKDIWYSRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKH 284

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           ++A+  L   L  DP   E   LR +    +G + EA+   + +L+ E ++   ++ + L
Sbjct: 285 EEALNALEKLLEYDPDFTEAQKLRGTVLAGLGRFEEALGPLEKSLEKEPENYNLWLQKGL 344

Query: 662 AF-----YQKEI-ALYTASKIN--SEFCWFDI 685
                   +  I A   A+++N  +E CW ++
Sbjct: 345 ILLDTGKLEPAIDAFENAARLNPDNETCWMNM 376



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 134/307 (43%), Gaps = 29/307 (9%)

Query: 384  RLSRGIAQVNEGKYASAISIFDQILKE---------DPMYPEALIG-RGTARAFQRELEA 433
            +L  GI     G+Y +A+ +F+ I ++         DP  P +++  +G     Q   E 
Sbjct: 754  KLRLGIEYFELGQYENALELFEGINEKAEGIYEKTRDPQKPNSVLYWKGLVFIRQEAYEK 813

Query: 434  AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA-----DILHE 488
            A+  F      +P+  E W   G + + LG   EA +   KALE   NSA     DI ++
Sbjct: 814  AVEAFKGITDQDPNFAEGWYFTGLSCSKLGRYEEASEAFKKALEI--NSALRDTHDICYQ 871

Query: 489  RGIVNFKFKDFNAAVEDLSACVKL--DKENKSAYTYL------GLALSSIGEYKKAEEAH 540
             GI NF+   F  A++      K   D+E  +  TY        L+L  +G YK+AE   
Sbjct: 872  LGISNFELGKFEEALKAFEKAFKTTPDREQITETTYTDLIYMKSLSLLRLGRYKEAEVGF 931

Query: 541  LKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
             + I  D +  EA  HL+   F Q+  + E+ALE  ++VL            +G+ L  L
Sbjct: 932  KEVIFRDSDNAEALAHLSTACFKQE--HYEEALEIFEKVLSQTPERKTVLFRKGVALKAL 989

Query: 599  GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
            G+ + ++      L + P     L  R      +G Y EA + +  AL+   +      L
Sbjct: 990  GKIQDSLDIFDLVLKLKPDCSYALEQRGYALFELGRYGEAAEAFKEALEYCPNKTYMQYL 1049

Query: 659  QCLAFYQ 665
            + LAF++
Sbjct: 1050 KGLAFFR 1056



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 110/259 (42%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D   +RGI+ +  G+  +A+   ++++   P YP+     G A     E E A+  F +
Sbjct: 472 IDSLYNRGISLLKLGRKETALEYLEKVVSLRPDYPDLSYSLGVALTELGEYEKALETFEK 531

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
               NP   E   RRG+    +G    A+Q   + L  +P S +  + +G+   K ++F 
Sbjct: 532 LASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPASREAWYRKGLALLKLENFE 591

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            AV+   A    D + + A    G A   + E   A E   + ++   +   AW +    
Sbjct: 592 EAVKAFDAVATKDADYEDAGVLKGFAQMKLKECASALETFERVLEKKPDSDTAWYYRGMI 651

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
              L   E+A +  +    ++     A+  R   L   GQ++ A +   + L  DP N+ 
Sbjct: 652 LYTLQRQEEAAKAFESASRLNPGLYTAFEYRAKCLFETGQYEAAFEAFEAVLEKDPENLS 711

Query: 621 CLYLRASCYHAIGEYREAI 639
            L  RA C   + + +EA+
Sbjct: 712 ALEKRAICLFELKKNKEAV 730



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 126/301 (41%), Gaps = 34/301 (11%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPM-------------------------------Y 414
           ++G+      KY SA+  FD + +E+P                                Y
Sbjct: 69  AKGLVLAKLEKYDSALECFDSLTRENPRNENALEQKCLLLAKIGKKDLALEALEDFLKKY 128

Query: 415 P---EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P    AL  +G   +     E A   F++ ++ +P   EAW R+G A   L    EAI+ 
Sbjct: 129 PANEAALYHKGILLSELSRYEEAEKIFSKVLKLDPENREAWFRKGFALVQLLRLNEAIKA 188

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             +A++ +P+  +  + R     K + +  A+E   + +++  + K  +    LAL  + 
Sbjct: 189 FEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRALALLKLQ 248

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
            Y +A ++  +  +LD    +AW             E+AL  L+++L  D  F++A  LR
Sbjct: 249 NYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLLEYDPDFTEAQKLR 308

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G +L GLG+ ++A+  L   L  +P N      +       G+   AI  ++ A  L  D
Sbjct: 309 GTVLAGLGRFEEALGPLEKSLEKEPENYNLWLQKGLILLDTGKLEPAIDAFENAARLNPD 368

Query: 652 S 652
           +
Sbjct: 369 N 369



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 127/275 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A     +  ++I  F++ L+  P Y  A    GT        E A+ +F  A++ NP
Sbjct: 2   RGLAFAEIDRTEASILCFEKALELMPEYAAAWCAMGTVAGKAERYEEALENFERALEINP 61

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EA   +G   A L +   A++         P + + L ++ ++  K    + A+E L
Sbjct: 62  KDSEACYAKGLVLAKLEKYDSALECFDSLTRENPRNENALEQKCLLLAKIGKKDLALEAL 121

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +K    N++A  + G+ LS +  Y++AE+   K ++LD    EAW         L  
Sbjct: 122 EDFLKKYPANEAALYHKGILLSELSRYEEAEKIFSKVLKLDPENREAWFRKGFALVQLLR 181

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A++  ++ + ID  + +A++ R   L  L  +++A++   S L I P   +  Y RA
Sbjct: 182 LNEAIKAFEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRA 241

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
                +  Y EA++ +    +L+ ++ + ++ Q L
Sbjct: 242 LALLKLQNYAEAVQSFARVTELDPENKDAWLQQGL 276



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 7/270 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   S G+A    G+Y  A+  F+++  E+P   E    RG         E A+  F   
Sbjct: 507 DLSYSLGVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEVGNYETALQAFERI 566

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +   P++ EAW R+G A   L    EA++        + +  D    +G    K K+  +
Sbjct: 567 LTEKPASREAWYRKGLALLKLENFEEAVKAFDAVATKDADYEDAGVLKGFAQMKLKECAS 626

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+E     ++   ++ +A+ Y G+ L ++   ++A +A   A +L+     A+ +  +  
Sbjct: 627 ALETFERVLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGLYTAFEYRAKCL 686

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS---- 617
            +    E A E  + VL  D     A   R + L  L ++K+A+  LS+ L  DP     
Sbjct: 687 FETGQYEAAFEAFEAVLEKDPENLSALEKRAICLFELKKNKEAVDALSTLLESDPERKDT 746

Query: 618 --NIECLYLRASC-YHAIGEYREAIKDYDA 644
              +E   LR    Y  +G+Y  A++ ++ 
Sbjct: 747 KLRLEEAKLRLGIEYFELGQYENALELFEG 776



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 126/291 (43%), Gaps = 7/291 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++ G A  +  +Y  A+  F + L+ +P        +G       +   A+  F EAI+ 
Sbjct: 374 MNMGFALYSLERYEEALEAFKEGLRLNPYLETGWNRKGIVLGKLGKTGEALEAFEEAIKL 433

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   +AWK RG    A  E  +A +  ++ L+  P   D L+ RGI   K      A+E
Sbjct: 434 RPDFEDAWKNRGLLLFASEECEKAEEAFAEVLKINPEDIDSLYNRGISLLKLGRKETALE 493

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            L   V L  +       LG+AL+ +GEY+KA E   K    +   LE      +   ++
Sbjct: 494 YLEKVVSLRPDYPDLSYSLGVALTELGEYEKALETFEKLASENPYDLEIQCRRGKLAMEV 553

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N E AL+  +++L       +A++ +GL L  L   ++A+K   +    D    +   L
Sbjct: 554 GNYETALQAFERILTEKPASREAWYRKGLALLKLENFEEAVKAFDAVATKDADYEDAGVL 613

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASK 675
           +      + E   A++ ++  L+ + DS         A+Y + + LYT  +
Sbjct: 614 KGFAQMKLKECASALETFERVLEKKPDS-------DTAWYYRGMILYTLQR 657



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 6/261 (2%)

Query: 369  CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
             V   +++  I  D R +   +G+A ++  +Y  A   F  +L+E P   + L  R  A 
Sbjct: 1334 AVEAFNRALEIKPDLRAAQEQKGLALLSLCRYEEARDAFSSVLEESPENADVLYNRAVAS 1393

Query: 426  AFQRELEAAISDFTEAI---QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
                  E A  D  + +     +P   EA    G A   L +   A+Q L   LE+EP  
Sbjct: 1394 FKTLNFEDAAKDLEKVLLFAPDSPDYTEACYMLGIASIELQDYERALQALDMVLEWEPEH 1453

Query: 483  ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
             + L+   +V F  +++  A       ++   E+  +  YLGL L  +   K+A +A  K
Sbjct: 1454 EEALYNMALVLFNLEEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEK 1513

Query: 543  AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
            A   +    EA  +       L  ++++L    ++L I        + +G++   L Q++
Sbjct: 1514 AALFNPKNEEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCMLDQYR 1573

Query: 603  KAIKDLSSGLGIDPSNIECLY 623
            +A++     L  DP NI+ +Y
Sbjct: 1574 EALRAFDGVLKRDPENIKAIY 1594



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 131/289 (45%), Gaps = 12/289 (4%)

Query: 370  VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
            + ++++  S S +    RGIA +  G+   A  IF  +++  P + +A  G+G     Q 
Sbjct: 1195 LEKLAREGSASKETLYDRGIALLELGRQEEAFEIFSDLIEIYPDFKKAWYGKGLVLFSQE 1254

Query: 430  ELEAAISDFTEAIQ-------SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
              E A+    +A+          P   +A  + G ++   G+  +A     K LE  P +
Sbjct: 1255 HYEEALKALKQAVPDGEESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNPMA 1314

Query: 483  ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
            ADI +  G+V         AVE  +  +++  + ++A    GLAL S+  Y++A +A   
Sbjct: 1315 ADIWYLSGLVMRGLDQNEDAVEAFNRALEIKPDLRAAQEQKGLALLSLCRYEEARDAFSS 1374

Query: 543  AIQLD-RNFLEAWGHLTQFYQDLANSEKALECLQQVLYI---DKRFSKAYHLRGLLLHGL 598
             ++    N    +      ++ L N E A + L++VL        +++A ++ G+    L
Sbjct: 1375 VLEESPENADVLYNRAVASFKTL-NFEDAAKDLEKVLLFAPDSPDYTEACYMLGIASIEL 1433

Query: 599  GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
              +++A++ L   L  +P + E LY  A     + EY EA + ++  L+
Sbjct: 1434 QDYERALQALDMVLEWEPEHEEALYNMALVLFNLEEYEEAARTFEQLLE 1482



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 102/229 (44%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
             +   N  +Y  A   F+Q+L+  P  PE+L   G        L+ A+  F +A   NP 
Sbjct: 1461 ALVLFNLEEYEEAARTFEQLLETSPEDPESLNYLGLCLLELDNLKEALKAFEKAALFNPK 1520

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              EA          L  + E++    + LE  P++ D+L+ +G++      +  A+    
Sbjct: 1521 NEEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCMLDQYREALRAFD 1580

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
              +K D EN  A   +G+       Y+ A  A  +A+ ++    ++  +L      +   
Sbjct: 1581 GVLKRDPENIKAIYNVGVVCFKQKLYETAARAFKEALSINPWHEQSLRYLGISLAKIGEY 1640

Query: 568  EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
            E+AL+  +++L I+ +  ++ + RG++L  L +  +AI+     L I P
Sbjct: 1641 EEALKAFEKLLRINPQDVQSMNYRGVILGKLERFGEAIRAFDEILRIYP 1689



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 111/261 (42%), Gaps = 4/261 (1%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            GIA +    Y  A+   D +L+ +P + EAL           E E A   F + ++++P 
Sbjct: 1427 GIASIELQDYERALQALDMVLEWEPEHEEALYNMALVLFNLEEYEEAARTFEQLLETSPE 1486

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              E+    G     L    EA++   KA  F P + + L+       K      ++    
Sbjct: 1487 DPESLNYLGLCLLELDNLKEALKAFEKAALFNPKNEEALYNAATTLIKLNRAQESLGYFD 1546

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL--TQFYQDLA 565
              +++  +N     Y G+    + +Y++A  A    ++ D   ++A  ++    F Q L 
Sbjct: 1547 RILEISPDNLDVLNYKGVIFCMLDQYREALRAFDGVLKRDPENIKAIYNVGVVCFKQKL- 1605

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              E A    ++ L I+    ++    G+ L  +G++++A+K     L I+P +++ +  R
Sbjct: 1606 -YETAARAFKEALSINPWHEQSLRYLGISLAKIGEYEEALKAFEKLLRINPQDVQSMNYR 1664

Query: 626  ASCYHAIGEYREAIKDYDAAL 646
                  +  + EAI+ +D  L
Sbjct: 1665 GVILGKLERFGEAIRAFDEIL 1685



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 66/140 (47%)

Query: 397  YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
            Y  A+ IF+++L + P     L  +G A     +++ ++  F   ++  P    A ++RG
Sbjct: 958  YEEALEIFEKVLSQTPERKTVLFRKGVALKALGKIQDSLDIFDLVLKLKPDCSYALEQRG 1017

Query: 457  QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
             A   LG   EA +   +ALE+ PN   + + +G+  F+  +F  A+E     ++L  + 
Sbjct: 1018 YALFELGRYGEAAEAFKEALEYCPNKTYMQYLKGLAFFRIGNFTEALEGFGKALELGCQK 1077

Query: 517  KSAYTYLGLALSSIGEYKKA 536
                 Y GL+    G+Y  A
Sbjct: 1078 PDIPYYTGLSCFETGDYAGA 1097



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 7/242 (2%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           +++      ++ +  RG   +  G Y +A+  F++IL E P   EA   +G A       
Sbjct: 531 KLASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPASREAWYRKGLALLKLENF 590

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E A+  F      +    +A   +G A+  L E   A++   + LE +P+S    + RG+
Sbjct: 591 EEAVKAFDAVATKDADYEDAGVLKGFAQMKLKECASALETFERVLEKKPDSDTAWYYRGM 650

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           + +  +    A +   +  +L+    +A+ Y    L   G+Y+ A EA    ++ D   L
Sbjct: 651 ILYTLQRQEEAAKAFESASRLNPGLYTAFEYRAKCLFETGQYEAAFEAFEAVLEKDPENL 710

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDK-------RFSKAYHLRGLLLHGLGQHKKA 604
            A         +L  +++A++ L  +L  D        R  +A    G+    LGQ++ A
Sbjct: 711 SALEKRAICLFELKKNKEAVDALSTLLESDPERKDTKLRLEEAKLRLGIEYFELGQYENA 770

Query: 605 IK 606
           ++
Sbjct: 771 LE 772



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 64/141 (45%)

Query: 372  RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            RI +    ++D    +G+      +Y  A+  FD +LK DP   +A+   G     Q+  
Sbjct: 1547 RILEISPDNLDVLNYKGVIFCMLDQYREALRAFDGVLKRDPENIKAIYNVGVVCFKQKLY 1606

Query: 432  EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
            E A   F EA+  NP   ++ +  G + A +GE  EA++   K L   P     ++ RG+
Sbjct: 1607 ETAARAFKEALSINPWHEQSLRYLGISLAKIGEYEEALKAFEKLLRINPQDVQSMNYRGV 1666

Query: 492  VNFKFKDFNAAVEDLSACVKL 512
            +  K + F  A+      +++
Sbjct: 1667 ILGKLERFGEAIRAFDEILRI 1687



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 7/228 (3%)

Query: 432  EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
            E A+    +  +   ++ E    RG A   LG   EA +  S  +E  P+     + +G+
Sbjct: 1189 EEALLPLEKLAREGSASKETLYDRGIALLELGRQEEAFEIFSDLIEIYPDFKKAWYGKGL 1248

Query: 492  VNFKFKDFNAAVEDLSACVKLDKENK-------SAYTYLGLALSSIGEYKKAEEAHLKAI 544
            V F  + +  A++ L   V   +E+K        A T +GL+    G+Y+ A +   K +
Sbjct: 1249 VLFSQEHYEEALKALKQAVPDGEESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVL 1308

Query: 545  QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
            + +    + W       + L  +E A+E   + L I      A   +GL L  L ++++A
Sbjct: 1309 EKNPMAADIWYLSGLVMRGLDQNEDAVEAFNRALEIKPDLRAAQEQKGLALLSLCRYEEA 1368

Query: 605  IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
                SS L   P N + LY RA        + +A KD +  L    DS
Sbjct: 1369 RDAFSSVLEESPENADVLYNRAVASFKTLNFEDAAKDLEKVLLFAPDS 1416



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 8/248 (3%)

Query: 376  SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
            +++   D    + ++ +  G+Y  A   F +++  D    EAL    TA   Q   E A+
Sbjct: 903  TETTYTDLIYMKSLSLLRLGRYKEAEVGFKEVIFRDSDNAEALAHLSTACFKQEHYEEAL 962

Query: 436  SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
              F + +   P       R+G A  ALG+  +++      L+ +P+ +  L +RG   F+
Sbjct: 963  EIFEKVLSQTPERKTVLFRKGVALKALGKIQDSLDIFDLVLKLKPDCSYALEQRGYALFE 1022

Query: 496  FKDFNAAVEDLSACVKLDKENKSAYTYL-GLALSSIGEYKKAEEAHLKAIQL--DRNFLE 552
               +  A E     ++    NK+   YL GLA   IG + +A E   KA++L   +  + 
Sbjct: 1023 LGRYGEAAEAFKEALEYCP-NKTYMQYLKGLAFFRIGNFTEALEGFGKALELGCQKPDIP 1081

Query: 553  AWGHLTQFYQ-DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
             +  L+ F   D A + KA + L +    D         R L L  LG+ ++A+  ++  
Sbjct: 1082 YYTGLSCFETGDYAGALKAFDRLPEEGTQD---PDVLQKRALALFELGRQEEAVSAVNFL 1138

Query: 612  LGIDPSNI 619
            L +   N+
Sbjct: 1139 LELSAENL 1146



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 33/262 (12%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR---AFQRELEAAISDFTEAIQS 444
            G++    G YA A+  FD++ +E    P+ L  R  A      Q E  +A++   E    
Sbjct: 1085 GLSCFETGDYAGALKAFDRLPEEGTQDPDVLQKRALALFELGRQEEAVSAVNFLLELSAE 1144

Query: 445  NPSAGEA-----------------------WKRRGQARAALGESVEAIQDLSKALEFEPN 481
            N + GE                         ++   A   LG+  EA+  L K       
Sbjct: 1145 NLTIGEKGNEPEGNEPEKSPEENNRICQELLEKFASALIELGKPEEALLPLEKLAREGSA 1204

Query: 482  SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            S + L++RGI   +      A E  S  +++  + K A+   GL L S   Y++A +A  
Sbjct: 1205 SKETLYDRGIALLELGRQEEAFEIFSDLIEIYPDFKKAWYGKGLVLFSQEHYEEALKALK 1264

Query: 542  KAI------QLDRNFLE-AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
            +A+      ++    LE A   +          E A +  ++VL  +   +  ++L GL+
Sbjct: 1265 QAVPDGEESKIGEPELEDALTKIGLSQLKTGKYEDACDTFEKVLEKNPMAADIWYLSGLV 1324

Query: 595  LHGLGQHKKAIKDLSSGLGIDP 616
            + GL Q++ A++  +  L I P
Sbjct: 1325 MRGLDQNEDAVEAFNRALEIKP 1346



 Score = 41.2 bits (95), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 3/122 (2%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEIQD 71
           +L + ++ I   +E +++D     A   R     L  L  + +A+   DS+L    +++D
Sbjct: 178 QLLRLNEAIKAFEEAIKIDPSYFEAWNCRC--FALMKLEVYEEALEAFDSMLRIYPDVKD 235

Query: 72  I-CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
           I  +RA    +L+ +   ++   +  +LDP    A++ +G   +  G+ EEAL+  EK  
Sbjct: 236 IWYSRALALLKLQNYAEAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLL 295

Query: 131 EH 132
           E+
Sbjct: 296 EY 297


>gi|254414341|ref|ZP_05028108.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
 gi|196179016|gb|EDX74013.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
           7420]
          Length = 717

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 117/264 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   +  +Y  A++  ++  K  P YPEA   RG A      LE AI+ + +A+Q  
Sbjct: 250 NRGLVLFHLTRYTEAVTSCEKATKLQPNYPEAWFHRGNALFSLGRLEDAIASYDQALQLK 309

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     W  RG A  +LG   EA+     A  F P+ A+  + +G+   + +  NAA+  
Sbjct: 310 PDDYATWGNRGSALYSLGRYREAVSSCQNATYFNPDYAEAWYMQGLALMQGEQPNAAIAC 369

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L     L  +   A+ Y G  L  +G    A  +  +A  L  +++EAW         L 
Sbjct: 370 LDKATALKPDYAQAWLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQLQ 429

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +A+ CL +V+ +     +A+  RG +L  L + + AI      + + P   +  Y +
Sbjct: 430 RPHEAIACLDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYNK 489

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
                 +     AI  +D AL+L+
Sbjct: 490 GLLLMHLDRPDAAITTFDNALELQ 513



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 113/220 (51%), Gaps = 2/220 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDP-MYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++G+  ++  +  +AI+ FD  L+  P +YP A + RG     +   +AAI+ + +A+  
Sbjct: 488 NKGLLLMHLDRPDAAITTFDNALELQPKLYP-AWVNRGNLLLQEGRWDAAIASYDQALAI 546

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P+  EAW  RG A   LG   +A+    +AL  + + A   +  G+   +   +  A+ 
Sbjct: 547 QPNVAEAWANRGIALEKLGRYQDALDSYDQALVLQSDDAKTWNHHGVTLIQLGRYQDALI 606

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
             S  +    ++   +   GLAL ++G Y++A     +AI+L+ ++ +AW +     ++L
Sbjct: 607 SFSNALDHQPDDPETWNNRGLALDNLGRYEEAMVCFEQAIELNSDYAQAWNNRGVALRNL 666

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
              E+A+    Q L ++  + +A++ RGL L  LG+ ++A
Sbjct: 667 GREEEAILSFDQALELNPDYPEAWNNRGLALRHLGREEEA 706



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 118/277 (42%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C+ R+ +      +    RG       +   AIS FD+ +   P Y +A   +G      
Sbjct: 437 CLDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYNKGLLLMHL 496

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              +AAI+ F  A++  P    AW  RG      G    AI    +AL  +PN A+    
Sbjct: 497 DRPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAIASYDQALAIQPNVAEAWAN 556

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RGI   K   +  A++     + L  ++   + + G+ L  +G Y+ A  +   A+    
Sbjct: 557 RGIALEKLGRYQDALDSYDQALVLQSDDAKTWNHHGVTLIQLGRYQDALISFSNALDHQP 616

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           +  E W +      +L   E+A+ C +Q + ++  +++A++ RG+ L  LG+ ++AI   
Sbjct: 617 DDPETWNNRGLALDNLGRYEEAMVCFEQAIELNSDYAQAWNNRGVALRNLGREEEAILSF 676

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
              L ++P   E    R      +G   EA   ++ A
Sbjct: 677 DQALELNPDYPEAWNNRGLALRHLGREEEANASFEQA 713



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 120/279 (43%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+  +N G+   A++ FDQ    +  Y EA   +G           A+  + +A+   P
Sbjct: 149 QGLVLMNGGRKEEALTSFDQATSLNHDYLEAWKHKGWILFNLNRYTEALDSWQQAVSLQP 208

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  E W ++G     L    +A+    KA+  +P++ +  + RG+V F    +  AV   
Sbjct: 209 NDYEVWFQQGNTCYRLERLDDALASYEKAITLQPDAPEAWNNRGLVLFHLTRYTEAVTSC 268

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               KL      A+ + G AL S+G  + A  ++ +A+QL  +    WG+       L  
Sbjct: 269 EKATKLQPNYPEAWFHRGNALFSLGRLEDAIASYDQALQLKPDDYATWGNRGSALYSLGR 328

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+   Q   Y +  +++A++++GL L    Q   AI  L     + P   +    R 
Sbjct: 329 YREAVSSCQNATYFNPDYAEAWYMQGLALMQGEQPNAAIACLDKATALKPDYAQAWLYRG 388

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                +G   +AI     A  L+ D +E + +Q +A  Q
Sbjct: 389 HLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQ 427



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 113/266 (42%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  + G+Y  A+S        +P Y EA   +G A     +  AAI+   +A    
Sbjct: 318 NRGSALYSLGRYREAVSSCQNATYFNPDYAEAWYMQGLALMQGEQPNAAIACLDKATALK 377

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG     LG   +AI    +A   +P+  +    +GI   + +  + A+  
Sbjct: 378 PDYAQAWLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQLQRPHEAIAC 437

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L   V+L  E+  A+ + G  L  +   + A  +  +AI L  ++ +AW +       L 
Sbjct: 438 LDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYNKGLLLMHLD 497

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             + A+      L +  +   A+  RG LL   G+   AI      L I P+  E    R
Sbjct: 498 RPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAIASYDQALAIQPNVAEAWANR 557

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
                 +G Y++A+  YD AL L+ D
Sbjct: 558 GIALEKLGRYQDALDSYDQALVLQSD 583



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 136/332 (40%), Gaps = 7/332 (2%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C+ + +  K       L RG      G  A AI+   Q     P Y EA   +G A    
Sbjct: 369 CLDKATALKPDYAQAWLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQL 428

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +    AI+     ++  P   EAWK RG     L    +AI    +A+  +P+     + 
Sbjct: 429 QRPHEAIACLDRVVELYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYN 488

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G++       +AA+      ++L  +   A+   G  L   G +  A  ++ +A+ +  
Sbjct: 489 KGLLLMHLDRPDAAITTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAIASYDQALAIQP 548

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N  EAW +     + L   + AL+   Q L +    +K ++  G+ L  LG+++ A+   
Sbjct: 549 NVAEAWANRGIALEKLGRYQDALDSYDQALVLQSDDAKTWNHHGVTLIQLGRYQDALISF 608

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
           S+ L   P + E    R      +G Y EA+  ++ A++L  D  +       A+  + +
Sbjct: 609 SNALDHQPDDPETWNNRGLALDNLGRYEEAMVCFEQAIELNSDYAQ-------AWNNRGV 661

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           AL    +       FD   +++P + E W  R
Sbjct: 662 ALRNLGREEEAILSFDQALELNPDYPEAWNNR 693



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 113/257 (43%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G + +A++ +++ +   P Y EA   +G        LE A++ + +A Q NP    AW  
Sbjct: 55  GWFDAALTNYEKAITLKPDYSEAWFNQGNILFKLGRLEDALASYDQATQFNPDLAVAWGN 114

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R      LG+  EA+    +A   +P+     + +G+V         A+        L+ 
Sbjct: 115 RASTLYNLGQYEEALASCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQATSLNH 174

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+ + G  L ++  Y +A ++  +A+ L  N  E W         L   + AL   
Sbjct: 175 DYLEAWKHKGWILFNLNRYTEALDSWQQAVSLQPNDYEVWFQQGNTCYRLERLDDALASY 234

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++ + +     +A++ RGL+L  L ++ +A+        + P+  E  + R +   ++G 
Sbjct: 235 EKAITLQPDAPEAWNNRGLVLFHLTRYTEAVTSCEKATKLQPNYPEAWFHRGNALFSLGR 294

Query: 635 YREAIKDYDAALDLELD 651
             +AI  YD AL L+ D
Sbjct: 295 LEDAIASYDQALQLKPD 311



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 119/317 (37%), Gaps = 41/317 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R     N G+Y  A++   Q     P Y +A   +G         E A++ F +A   N
Sbjct: 114 NRASTLYNLGQYEEALASCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQATSLN 173

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EAWK +G     L    EA+    +A+  +PN  ++  ++G   ++ +  + A+  
Sbjct: 174 HDYLEAWKHKGWILFNLNRYTEALDSWQQAVSLQPNDYEVWFQQGNTCYRLERLDDALAS 233

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L  +   A+   GL L  +  Y +A  +  KA +L  N+ EAW H         
Sbjct: 234 YEKAITLQPDAPEAWNNRGLVLFHLTRYTEAVTSCEKATKLQPNYPEAWFH--------- 284

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
                                    RG  L  LG+ + AI      L + P +      R
Sbjct: 285 -------------------------RGNALFSLGRLEDAIASYDQALQLKPDDYATWGNR 319

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
            S  +++G YREA+     A     D  E + +Q LA  Q E       + N+     D 
Sbjct: 320 GSALYSLGRYREAVSSCQNATYFNPDYAEAWYMQGLALMQGE-------QPNAAIACLDK 372

Query: 686 DGDIDPLFKEYWCKRLH 702
              + P + + W  R H
Sbjct: 373 ATALKPDYAQAWLYRGH 389



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 118/298 (39%), Gaps = 3/298 (1%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            VT   K+  +  ++      RG A  + G+   AI+ +DQ L+  P        RG+A 
Sbjct: 264 AVTSCEKATKLQPNYPEAWFHRGNALFSLGRLEDAIASYDQALQLKPDDYATWGNRGSAL 323

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                   A+S    A   NP   EAW  +G A     +   AI  L KA   +P+ A  
Sbjct: 324 YSLGRYREAVSSCQNATYFNPDYAEAWYMQGLALMQGEQPNAAIACLDKATALKPDYAQA 383

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
              RG + F+      A+        L  +   A++  G+AL  +    +A     + ++
Sbjct: 384 WLYRGHLLFQLGHLADAIASCQQATTLQPDYVEAWSIQGIALMQLQRPHEAIACLDRVVE 443

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           L     EAW H       L   E A+    + + +   + +A++ +GLLL  L +   AI
Sbjct: 444 LYPEHPEAWKHRGTVLCQLERLEDAISSFDRAITLKPDYFQAWYNKGLLLMHLDRPDAAI 503

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
               + L + P        R +     G +  AI  YD AL ++ +  E +  + +A 
Sbjct: 504 TTFDNALELQPKLYPAWVNRGNLLLQEGRWDAAIASYDQALAIQPNVAEAWANRGIAL 561



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 12/239 (5%)

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
           +N      W ++G     +G   EAI    KA +F PN  +I    G   F    F+AA+
Sbjct: 2   TNDYLANQWLQQGIEYFQIGRYGEAIASFEKAAQFHPNMPEIWFHWGNTCFHLGWFDAAL 61

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +    + L  +   A+   G  L  +G  + A  ++ +A Q + +   AWG+      +
Sbjct: 62  TNYEKAITLKPDYSEAWFNQGNILFKLGRLEDALASYDQATQFNPDLAVAWGNRASTLYN 121

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   E+AL   QQ  +    + +A++++GL+L   G+ ++A+        ++   +E   
Sbjct: 122 LGQYEEALASCQQATHCQPDYVQAWYMQGLVLMNGGRKEEALTSFDQATSLNHDYLEAWK 181

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ------------CLAFYQKEIAL 670
            +      +  Y EA+  +  A+ L+ +  E +  Q             LA Y+K I L
Sbjct: 182 HKGWILFNLNRYTEALDSWQQAVSLQPNDYEVWFQQGNTCYRLERLDDALASYEKAITL 240


>gi|359464250|ref|ZP_09252813.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 1345

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 30/273 (10%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            G+   ++G+Y  A++ F+Q +  DP  P    G+G     Q++ +AAI+  T+AI+  P 
Sbjct: 761  GMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQAAIAAHTQAIELEPD 820

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
            +   +  R        +   AI DL+KA++  P      + RG          AA+ D S
Sbjct: 821  SANDYFSRANVYITTQQYQPAIADLTKAIQLAPPDPIYFNNRGDAYAALNQPEAALADYS 880

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
              + +DK N  AY  LG       +Y++A                           +A  
Sbjct: 881  QAIAVDKNNTRAYIGLGTVYQRTRQYQRA---------------------------IAQF 913

Query: 568  EKALEC--LQQVLYIDKRFSK-AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            ++A+E     Q L  DK++   AY  RG L   LG+ ++AI D S  + + P        
Sbjct: 914  DQAIEVADFPQQLETDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRA 973

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
            RA  Y A+  Y+EAI DY  A+++    +  ++
Sbjct: 974  RALNYTALNRYQEAIADYTQAIEIAPKDLSTYI 1006



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 21/282 (7%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG    + GK   AI+ F Q ++  P        R          + AI+D+T+AI+  
Sbjct: 939  ARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEIA 998

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P     + +RG+    LG+  EA  D  K L+ EP+ +     R  V    K +  A+ D
Sbjct: 999  PKDLSTYIQRGKVYRTLGQEAEANADFQKVLQTEPSDSQGYEARADVYKSLKRYPEALAD 1058

Query: 506  LSACVKLDKENKSAYTYL----GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
             +  +KL  +     + L         ++ +Y++A   + KA+ L  N          F 
Sbjct: 1059 YTQAIKLAPQTPLQRSLLHSSRAQMYGNLQQYEQANSDYSKALALLPN------PTVPFA 1112

Query: 562  QDL-----------ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             DL              E AL    Q + I+ +   AY  RG L  G  +++ A+ D ++
Sbjct: 1113 ADLYIARGNNSLNWQRQEDALADFNQAININPKNVMAYVGRGRLSLGTQKYQDALADFNT 1172

Query: 611  GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
             + ++P        R+  Y A+    +AI D D  ++L+ ++
Sbjct: 1173 VIKLNPKLGFVYDFRSRTYQALNRIEDAITDADQWIELQANA 1214



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 112/287 (39%), Gaps = 34/287 (11%)

Query: 396 KYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +YA A++ FD+ ++ +P +   A  G+      Q    AA     + +   P+    WK 
Sbjct: 565 QYAEALAAFDRAIQLNPSFVHLAWYGKALVYRSQENFPAAEMALRKVLTLKPNYKPGWKV 624

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHE-------------------------- 488
                    +  +A+  ++  L+  P  A +L+E                          
Sbjct: 625 LSAVYRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVVLSVLYRYPEALTAIDAAIAQAP 684

Query: 489 -------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
                  RG V  K   +   +  L+  +++D     AYT  G+  S +   K+A     
Sbjct: 685 RAAFYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLK 744

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KAI LD  ++ A+G L   Y      ++AL    Q + ID +    Y  +G +     Q+
Sbjct: 745 KAIALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQY 804

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + AI   +  + ++P +    + RA+ Y    +Y+ AI D   A+ L
Sbjct: 805 QAAIAAHTQAIELEPDSANDYFSRANVYITTQQYQPAIADLTKAIQL 851



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 40/260 (15%)

Query: 434 AISDFTEAIQSNPS------AGEAWKRRGQ-----ARAALGESV---------------- 466
           A++ F  AIQ NPS       G+A   R Q     A  AL + +                
Sbjct: 569 ALAAFDRAIQLNPSFVHLAWYGKALVYRSQENFPAAEMALRKVLTLKPNYKPGWKVLSAV 628

Query: 467 --------EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
                   +A+  ++  L+  P  A +L+E+ +V      +    E L+A      +   
Sbjct: 629 YRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVVLSVLYRYP---EALTAIDAAIAQAPR 685

Query: 519 AYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
           A  Y+  G  L  +  Y++   A  +AI++D N   A+ +    Y  L   ++A+  L++
Sbjct: 686 AAFYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLKK 745

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            + +D ++  AY   G+L H  G++++A+   + G+ IDP N      +   Y A  +Y+
Sbjct: 746 AIALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQ 805

Query: 637 EAIKDYDAALDLELDSMEKF 656
            AI  +  A++LE DS   +
Sbjct: 806 AAIAAHTQAIELEPDSANDY 825



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 4/214 (1%)

Query: 379  ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
             + D  ++RG   +N  +   A++ F+Q +  +P    A +GRG      ++ + A++DF
Sbjct: 1111 FAADLYIARGNNSLNWQRQEDALADFNQAININPKNVMAYVGRGRLSLGTQKYQDALADF 1170

Query: 439  TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
               I+ NP  G  +  R +   AL    +AI D  + +E + N+A     RGI++    +
Sbjct: 1171 NTVIKLNPKLGFVYDFRSRTYQALNRIEDAITDADQWIELQANAAS-YTRRGILHVLGAN 1229

Query: 499  FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL- 557
             + A+ D    + L+ +       LGL     G  K+A     +AI+LD +  E    L 
Sbjct: 1230 PSLALNDFQQAITLNPKAIIPTINLGLIYYEQGNRKQAIAQFRQAIELDSSLAEPQLALA 1289

Query: 558  TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
            T  Y    + ++A+   Q  L  D +F +   L+
Sbjct: 1290 TALYPR--DQQQAIALAQSALKQDPKFREVEFLK 1321



 Score = 40.4 bits (93), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 27/126 (21%), Positives = 65/126 (51%), Gaps = 3/126 (2%)

Query: 5   KLLDSRYRLNK-THKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL 63
           K+L + YRL K   + +  ++  +++    A  +  +  +  L  L  + +A+  +D+ +
Sbjct: 623 KVLSAVYRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVV--LSVLYRYPEALTAIDAAI 680

Query: 64  AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           AQ+       NR +   +++ ++  +   ++A+++DP +  AY  +G  +S L R +EA+
Sbjct: 681 AQAPRAAFYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAI 740

Query: 124 SVWEKG 129
           +  +K 
Sbjct: 741 ADLKKA 746


>gi|294781973|ref|ZP_06747305.1| TPR domain protein [Fusobacterium sp. 1_1_41FAA]
 gi|294481784|gb|EFG29553.1| TPR domain protein [Fusobacterium sp. 1_1_41FAA]
          Length = 275

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 125/278 (44%), Gaps = 54/278 (19%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ----SNPSAGEAWKRR 455
            I  + + + +DP   +  I RG      RE E A+ D++  I+    SN + G+ ++ R
Sbjct: 12  VIEEYTRKIVKDPNNIDYYIDRGDIYFSIREFEKALKDYSRVIELSSYSNSTKGKYYRDR 71

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L E  +AI+D SKA+E EP   D  + RG   +  K++  A+ED S  ++L   
Sbjct: 72  GYIYYCLKEYKKAIEDFSKAIELEPTDRDYHNNRGNAYYYLKEYKKAIEDYSRAIELSPY 131

Query: 516 N----KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           +       Y   G A   + EY++A E + KAI+      E W                 
Sbjct: 132 SVVFRGDYYCNRGNAYYYLKEYERAMEDYSKAIE------EGW----------------- 168

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL-------GIDPSNIECLYL 624
                V Y      + YH RG L + LG+++KAI+D S  +        + P  I+    
Sbjct: 169 -----VTY------RYYHARGELYYYLGEYEKAIEDYSKAIEHYSIETDLFPLRIDYYID 217

Query: 625 RASCYHAIGEYREAIKDYDAALDL-----ELDSMEKFV 657
           R   Y+ + EY +AIKDY  AL+      E++ +EK +
Sbjct: 218 RGDAYYCLKEYEKAIKDYSCALEFKSICEEVEDLEKII 255



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 8/190 (4%)

Query: 326 ESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
           E Y++  + D  + D    R  + F     ++   +  R     +   S S S    +  
Sbjct: 14  EEYTRKIVKDPNNIDYYIDRGDIYFSIREFEKALKDYSR----VIELSSYSNSTKGKYYR 69

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RG       +Y  AI  F + ++ +P   +    RG A  + +E + AI D++ AI+ +
Sbjct: 70  DRGYIYYCLKEYKKAIEDFSKAIELEPTDRDYHNNRGNAYYYLKEYKKAIEDYSRAIELS 129

Query: 446 PSA----GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           P +    G+ +  RG A   L E   A++D SKA+E    +    H RG + +   ++  
Sbjct: 130 PYSVVFRGDYYCNRGNAYYYLKEYERAMEDYSKAIEEGWVTYRYYHARGELYYYLGEYEK 189

Query: 502 AVEDLSACVK 511
           A+ED S  ++
Sbjct: 190 AIEDYSKAIE 199



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 4/118 (3%)

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL----YIDKRFSKAYHL 590
           K  E + + I  D N ++ +      Y  +   EKAL+   +V+    Y +    K Y  
Sbjct: 11  KVIEEYTRKIVKDPNNIDYYIDRGDIYFSIREFEKALKDYSRVIELSSYSNSTKGKYYRD 70

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           RG + + L ++KKAI+D S  + ++P++ +    R + Y+ + EY++AI+DY  A++L
Sbjct: 71  RGYIYYCLKEYKKAIEDFSKAIELEPTDRDYHNNRGNAYYYLKEYKKAIEDYSRAIEL 128


>gi|386876076|ref|ZP_10118214.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
           BD31]
 gi|386806122|gb|EIJ65603.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
           BD31]
          Length = 297

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 23/254 (9%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+A VN+GKY  A+ ++D+ L  DP        +G A       + A+  F +AIQ NP
Sbjct: 10  KGVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECFNQAIQINP 69

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV--NFKFKD-----F 499
           +   AW  +G     LG + EA+    + ++ +PN A   + RG+   N    D     F
Sbjct: 70  NDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDPNDA-AWYNRGMALDNLGRNDEALECF 128

Query: 500 NAAVE----DLSACVK----LDKENKSA-------YTYLGLALSSIGEYKKAEEAHLKAI 544
           N A++    +LSACVK    LDK  K+        +T  G+AL  I +  +A E + +A+
Sbjct: 129 NQAIQINPNNLSACVKKDITLDKIGKNVEREMVRMWTNKGVALEKIDKLNEALECYDEAL 188

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           ++ RN++  W +       L    +ALEC  Q + I+   +  ++ +G+ L  L ++ +A
Sbjct: 189 KISRNYMWPWDNKGIILNKLNRINEALECFNQAIQINPNDATVWNDKGVALGKLNRNDEA 248

Query: 605 IKDLSSGLGIDPSN 618
           +      + +DP++
Sbjct: 249 VMAFDQAIKLDPNS 262



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 66/294 (22%), Positives = 130/294 (44%), Gaps = 30/294 (10%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L  +G A   Q +   A+  + +A+  +P+    W  +G A   LG + EA++  ++A++
Sbjct: 7   LCEKGVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECFNQAIQ 66

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
             PN A     +GI   K    + AV      +K+D  N +A+   G+AL ++G   +A 
Sbjct: 67  INPNDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDP-NDAAWYNRGMALDNLGRNDEAL 125

Query: 538 EAHLKAIQLDRNFLEA----------------------WGHLTQFYQDLANSEKALECLQ 575
           E   +AIQ++ N L A                      W +     + +    +ALEC  
Sbjct: 126 ECFNQAIQINPNNLSACVKKDITLDKIGKNVEREMVRMWTNKGVALEKIDKLNEALECYD 185

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + L I + +   +  +G++L+ L +  +A++  +  + I+P++      +      +   
Sbjct: 186 EALKISRNYMWPWDNKGIILNKLNRINEALECFNQAIQINPNDATVWNDKGVALGKLNRN 245

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDI 689
            EA+  +D A+ L+ +S        +A+  K IAL    K +     F+++ +I
Sbjct: 246 DEAVMAFDQAIKLDPNS-------AVAWKNKGIALENLDKSDEAHNAFEMEREI 292



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 1/143 (0%)

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           EN +     G+AL + G+Y KA + + KA+ +D N    W +      +L  +++ALEC 
Sbjct: 2   ENATELCEKGVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECF 61

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + I+   + A+  +G+ L  LG++ +A+      + IDP N    Y R      +G 
Sbjct: 62  NQAIQINPNDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDP-NDAAWYNRGMALDNLGR 120

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
             EA++ ++ A+ +  +++   V
Sbjct: 121 NDEALECFNQAIQINPNNLSACV 143



 Score = 51.2 bits (121), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 23/207 (11%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI     G+   A+  FDQ +K DP    A   RG A       + A+  F +AIQ N
Sbjct: 77  NKGITLGKLGRNDEAVMAFDQEIKIDP-NDAAWYNRGMALDNLGRNDEALECFNQAIQIN 135

Query: 446 PSAGEA----------------------WKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
           P+   A                      W  +G A   + +  EA++   +AL+   N  
Sbjct: 136 PNNLSACVKKDITLDKIGKNVEREMVRMWTNKGVALEKIDKLNEALECYDEALKISRNYM 195

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
                +GI+  K    N A+E  +  ++++  + + +   G+AL  +    +A  A  +A
Sbjct: 196 WPWDNKGIILNKLNRINEALECFNQAIQINPNDATVWNDKGVALGKLNRNDEAVMAFDQA 255

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKA 570
           I+LD N   AW +     ++L  S++A
Sbjct: 256 IKLDPNSAVAWKNKGIALENLDKSDEA 282



 Score = 49.7 bits (117), Expect = 0.008,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 26/185 (14%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEAL---------IGRGTARAFQR------- 429
           +RG+A  N G+   A+  F+Q ++ +P    A          IG+   R   R       
Sbjct: 110 NRGMALDNLGRNDEALECFNQAIQINPNNLSACVKKDITLDKIGKNVEREMVRMWTNKGV 169

Query: 430 ------ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
                 +L  A+  + EA++ + +    W  +G     L    EA++  ++A++  PN A
Sbjct: 170 ALEKIDKLNEALECYDEALKISRNYMWPWDNKGIILNKLNRINEALECFNQAIQINPNDA 229

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
            + +++G+   K    + AV      +KLD  +  A+   G+AL ++    K++EAH  A
Sbjct: 230 TVWNDKGVALGKLNRNDEAVMAFDQAIKLDPNSAVAWKNKGIALENL---DKSDEAH-NA 285

Query: 544 IQLDR 548
            +++R
Sbjct: 286 FEMER 290



 Score = 48.5 bits (114), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 70/138 (50%), Gaps = 1/138 (0%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           +A  L E+G+       ++ A++     + +D  N + +   G+AL  +G   +A E   
Sbjct: 3   NATELCEKGVALVNQGKYHKALKVYDKALNIDPNNWNVWYNKGVALDELGRNDEALECFN 62

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +AIQ++ N   AW +       L  +++A+    Q + ID     A++ RG+ L  LG++
Sbjct: 63  QAIQINPNDAWAWSNKGITLGKLGRNDEAVMAFDQEIKIDPN-DAAWYNRGMALDNLGRN 121

Query: 602 KKAIKDLSSGLGIDPSNI 619
            +A++  +  + I+P+N+
Sbjct: 122 DEALECFNQAIQINPNNL 139


>gi|425440272|ref|ZP_18820578.1| putative Tetratricopeptide repeat protein [Microcystis aeruginosa PCC
            9717]
 gi|389719348|emb|CCH96816.1| putative Tetratricopeptide repeat protein [Microcystis aeruginosa PCC
            9717]
          Length = 1539

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 154/368 (41%), Gaps = 77/368 (20%)

Query: 382  DFRLSRGIA-QVNE-GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
            DF L   +A  +NE G+Y  A+   ++ +K  P + E+   RG  R +  +   AI+D  
Sbjct: 645  DFILYNWLAVPLNELGRYPEALKSGNKAIKIKPDHAESYFRRGQTRRYMGDYRGAIADVN 704

Query: 440  EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV------- 492
            EA++  P    A++ RG  ++  G++  AI D+++AL  +P++A     RGIV       
Sbjct: 705  EALRLQPDLAIAYQFRGTLKSEQGDNQGAIADINEALRLQPDNAGAYAARGIVYARMGDQ 764

Query: 493  ---------------------------NFKFKDFNAAVEDLSACVKLDKENK-SAYTYLG 524
                                        F  KD+  AVED +  ++L  E+    YT  G
Sbjct: 765  QRLAEDFNKALSLQPDDAWIHQNRGYARFILKDYQKAVEDYTEAIRLAPESAYQFYTERG 824

Query: 525  LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI---- 580
                   +YKKA E + +A++   N++ A+    + Y  L N +   E  ++ L +    
Sbjct: 825  FVRYQQEDYKKAIEDYTEALRFRPNYVMAYVRRGEAYAKLGNQQGFTEDFKKALSLQPDN 884

Query: 581  ---------------DKR-----FSKA-----------YHLRGLLLHGLGQHKKAIKDLS 609
                           DK+     + +A           Y+ RG   +G   +K AI D +
Sbjct: 885  AWIYTERGDTYFFLKDKQKGIGDYDEAIRLAPELADFYYNWRGNQFYGQEDYKAAIVDYT 944

Query: 610  SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----Y 664
              +G+ P      Y R   Y    +Y+EAI DY  A+ L+ D  + F  + + +     Y
Sbjct: 945  KAIGLKPDEAWYYYNRGDAYRLQEDYKEAIADYTEAIRLKPDLADAFNGRAITYARQKNY 1004

Query: 665  QKEIALYT 672
            Q  IA YT
Sbjct: 1005 QGAIADYT 1012



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 157/339 (46%), Gaps = 42/339 (12%)

Query: 383  FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
            +  +RG A   +  Y  AI+ + + ++  P   +A  GR    A Q+  + AI+D+TEAI
Sbjct: 956  YYYNRGDAYRLQEDYKEAIADYTEAIRLKPDLADAFNGRAITYARQKNYQGAIADYTEAI 1015

Query: 443  QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
            + +P   E +  R Q R  LG+   A+ DL++A+  +P+    L ERG +  + KD+  A
Sbjct: 1016 RLDPKYDENYYSRSQVRQELGDLQGALADLNEAVRLDPDDVGNLRERGDIRRQLKDYQEA 1075

Query: 503  VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL-DRNFLEAWGHLTQFY 561
            + D +  ++L  +   AY   GLA     +Y +A + + +A+++  + F   +G+  + +
Sbjct: 1076 IADYTEAIRLKPDFADAYNARGLAYHLQEKYPEAIKDYSEAVRIYPKPFY--YGNRGEAH 1133

Query: 562  QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL--------- 612
            +   + ++A+    + + +   F+ AY+ RGL    +G  + AI+DL             
Sbjct: 1134 RLQGDYQEAITDYTEAIGLKPDFADAYNARGLAKAEIGDKQGAIEDLQKAAQLFREQGND 1193

Query: 613  --------------GI----------DPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
                          GI          +P N++    R    +   +Y+ AI +Y+ A+ L
Sbjct: 1194 DAYQVAQTKIREIQGISTEDEQVSRGNPQNVDAHLGRGIASYKREDYQTAIAEYNEAIRL 1253

Query: 649  ELDSMEKFVLQCLAF-----YQKEIALYT-ASKINSEFC 681
               +   + L+  A+     YQ+ I  YT A ++N +F 
Sbjct: 1254 APQNAFAYNLRGNAYFAQENYQQAIKDYTQAIRLNPKFA 1292



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 44/322 (13%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAISDFTE 440
            +RG A+     Y  A+  + + ++  P      Y E    RG  R  Q + + AI D+TE
Sbjct: 787  NRGYARFILKDYQKAVEDYTEAIRLAPESAYQFYTE----RGFVRYQQEDYKKAIEDYTE 842

Query: 441  AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD-- 498
            A++  P+   A+ RRG+A A LG      +D  KAL  +P++A I  ERG   F  KD  
Sbjct: 843  ALRFRPNYVMAYVRRGEAYAKLGNQQGFTEDFKKALSLQPDNAWIYTERGDTYFFLKDKQ 902

Query: 499  ---------------------------------FNAAVEDLSACVKLDKENKSAYTYLGL 525
                                             + AA+ D +  + L  +    Y   G 
Sbjct: 903  KGIGDYDEAIRLAPELADFYYNWRGNQFYGQEDYKAAIVDYTKAIGLKPDEAWYYYNRGD 962

Query: 526  ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
            A     +YK+A   + +AI+L  +  +A+      Y    N + A+    + + +D ++ 
Sbjct: 963  AYRLQEDYKEAIADYTEAIRLKPDLADAFNGRAITYARQKNYQGAIADYTEAIRLDPKYD 1022

Query: 586  KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            + Y+ R  +   LG  + A+ DL+  + +DP ++  L  R      + +Y+EAI DY  A
Sbjct: 1023 ENYYSRSQVRQELGDLQGALADLNEAVRLDPDDVGNLRERGDIRRQLKDYQEAIADYTEA 1082

Query: 646  LDLELDSMEKFVLQCLAFYQKE 667
            + L+ D  + +  + LA++ +E
Sbjct: 1083 IRLKPDFADAYNARGLAYHLQE 1104



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 38/296 (12%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALI--GRGTARAFQRELEAAISDFTEAIQ 443
            +RG+A   + KY  AI  + + ++   +YP+      RG A   Q + + AI+D+TEAI 
Sbjct: 1095 ARGLAYHLQEKYPEAIKDYSEAVR---IYPKPFYYGNRGEAHRLQGDYQEAITDYTEAIG 1151

Query: 444  SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF------------------------- 478
              P   +A+  RG A+A +G+   AI+DL KA +                          
Sbjct: 1152 LKPDFADAYNARGLAKAEIGDKQGAIEDLQKAAQLFREQGNDDAYQVAQTKIREIQGIST 1211

Query: 479  --------EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
                     P + D    RGI ++K +D+  A+ + +  ++L  +N  AY   G A  + 
Sbjct: 1212 EDEQVSRGNPQNVDAHLGRGIASYKREDYQTAIAEYNEAIRLAPQNAFAYNLRGNAYFAQ 1271

Query: 531  GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
              Y++A + + +AI+L+  F  A+ +    Y +L   + A+    + + I    +  Y  
Sbjct: 1272 ENYQQAIKDYTQAIRLNPKFAVAYSNRGNIYYELEEYKSAVSDYTEAIRIKPDDADFYFK 1331

Query: 591  RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            RG        +  AI D +  + + P      Y R        +Y+ AI DY  A+
Sbjct: 1332 RGDARDQSEDYSGAIADYTEAIRLKPDYTTAYYYRGISKSKQKDYQAAISDYSQAI 1387



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 5/244 (2%)

Query: 421  RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
            RG     Q + +AAI D+T+AI   P     +  RG A     +  EAI D ++A+  +P
Sbjct: 926  RGNQFYGQEDYKAAIVDYTKAIGLKPDEAWYYYNRGDAYRLQEDYKEAIADYTEAIRLKP 985

Query: 481  NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            + AD  + R I   + K++  A+ D +  ++LD +    Y         +G+ + A    
Sbjct: 986  DLADAFNGRAITYARQKNYQGAIADYTEAIRLDPKYDENYYSRSQVRQELGDLQGALADL 1045

Query: 541  LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
             +A++LD + +          + L + ++A+    + + +   F+ AY+ RGL  H   +
Sbjct: 1046 NEAVRLDPDDVGNLRERGDIRRQLKDYQEAIADYTEAIRLKPDFADAYNARGLAYHLQEK 1105

Query: 601  HKKAIKDLSSGLGIDPSNIECLYL--RASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
            + +AIKD S  + I P   +  Y   R   +   G+Y+EAI DY  A+ L+ D  + +  
Sbjct: 1106 YPEAIKDYSEAVRIYP---KPFYYGNRGEAHRLQGDYQEAITDYTEAIGLKPDFADAYNA 1162

Query: 659  QCLA 662
            + LA
Sbjct: 1163 RGLA 1166



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 90/173 (52%)

Query: 372  RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            ++S+    +VD  L RGIA      Y +AI+ +++ ++  P    A   RG A   Q   
Sbjct: 1215 QVSRGNPQNVDAHLGRGIASYKREDYQTAIAEYNEAIRLAPQNAFAYNLRGNAYFAQENY 1274

Query: 432  EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
            + AI D+T+AI+ NP    A+  RG     L E   A+ D ++A+  +P+ AD   +RG 
Sbjct: 1275 QQAIKDYTQAIRLNPKFAVAYSNRGNIYYELEEYKSAVSDYTEAIRIKPDDADFYFKRGD 1334

Query: 492  VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
               + +D++ A+ D +  ++L  +  +AY Y G++ S   +Y+ A   + +AI
Sbjct: 1335 ARDQSEDYSGAIADYTEAIRLKPDYTTAYYYRGISKSKQKDYQAAISDYSQAI 1387



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 12/260 (4%)

Query: 397  YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
            Y  AI+ + + ++  P + +A   RG A   Q +   AI D++EA++  P     +  RG
Sbjct: 1072 YQEAIADYTEAIRLKPDFADAYNARGLAYHLQEKYPEAIKDYSEAVRIYPKPF-YYGNRG 1130

Query: 457  QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE- 515
            +A    G+  EAI D ++A+  +P+ AD  + RG+   +  D   A+EDL    +L +E 
Sbjct: 1131 EAHRLQGDYQEAITDYTEAIGLKPDFADAYNARGLAKAEIGDKQGAIEDLQKAAQLFREQ 1190

Query: 516  -NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQDLA--NSEKAL 571
             N  AY      +  I      +E      Q+ R N      HL +        + + A+
Sbjct: 1191 GNDDAYQVAQTKIREIQGISTEDE------QVSRGNPQNVDAHLGRGIASYKREDYQTAI 1244

Query: 572  ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
                + + +  + + AY+LRG        +++AIKD +  + ++P        R + Y+ 
Sbjct: 1245 AEYNEAIRLAPQNAFAYNLRGNAYFAQENYQQAIKDYTQAIRLNPKFAVAYSNRGNIYYE 1304

Query: 632  IGEYREAIKDYDAALDLELD 651
            + EY+ A+ DY  A+ ++ D
Sbjct: 1305 LEEYKSAVSDYTEAIRIKPD 1324



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 35/301 (11%)

Query: 383  FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
            F   RG  +  +  Y  AI  + + L+  P Y  A + RG A A     +    DF +A+
Sbjct: 819  FYTERGFVRYQQEDYKKAIEDYTEALRFRPNYVMAYVRRGEAYAKLGNQQGFTEDFKKAL 878

Query: 443  QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE-RGIVNFKFKDFNA 501
               P     +  RG     L +  + I D  +A+   P  AD  +  RG   +  +D+ A
Sbjct: 879  SLQPDNAWIYTERGDTYFFLKDKQKGIGDYDEAIRLAPELADFYYNWRGNQFYGQEDYKA 938

Query: 502  AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            A+ D +  + L  +    Y   G A     +YK+A   + +AI+L  +  +A+      Y
Sbjct: 939  AIVDYTKAIGLKPDEAWYYYNRGDAYRLQEDYKEAIADYTEAIRLKPDLADAFNGRAITY 998

Query: 562  QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI-- 619
                N + A+    + + +D ++ + Y+ R  +   LG  + A+ DL+  + +DP ++  
Sbjct: 999  ARQKNYQGAIADYTEAIRLDPKYDENYYSRSQVRQELGDLQGALADLNEAVRLDPDDVGN 1058

Query: 620  ----------------------ECLYL----------RASCYHAIGEYREAIKDYDAALD 647
                                  E + L          R   YH   +Y EAIKDY  A+ 
Sbjct: 1059 LRERGDIRRQLKDYQEAIADYTEAIRLKPDFADAYNARGLAYHLQEKYPEAIKDYSEAVR 1118

Query: 648  L 648
            +
Sbjct: 1119 I 1119



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 16/256 (6%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN---SADI 485
           R  + A     +AI+  PS  EAW   G A  +  +  EA +   KAL ++P      D+
Sbjct: 555 RRYQQAQIALEKAIEIKPSY-EAWFVHGMALKSQKKYQEAKKSFQKALTYKPEYKVDKDL 613

Query: 486 -LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
            L + G   +   D+  AV+     ++L  ++   Y +L + L+ +G Y +A ++  KAI
Sbjct: 614 ALRQVGDSAWYSGDYEEAVKAFKEAIELKPDDFILYNWLAVPLNELGRYPEALKSGNKAI 673

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           ++  +  E++    Q  + + +   A+  + + L +    + AY  RG L    G ++ A
Sbjct: 674 KIKPDHAESYFRRGQTRRYMGDYRGAIADVNEALRLQPDLAIAYQFRGTLKSEQGDNQGA 733

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD--------SMEKF 656
           I D++  L + P N      R   Y  +G+ +   +D++ AL L+ D           +F
Sbjct: 734 IADINEALRLQPDNAGAYAARGIVYARMGDQQRLAEDFNKALSLQPDDAWIHQNRGYARF 793

Query: 657 VLQCLAFYQKEIALYT 672
           +L+    YQK +  YT
Sbjct: 794 ILKD---YQKAVEDYT 806



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 40/72 (55%)

Query: 371  TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            T   + K    DF   RG A+     Y+ AI+ + + ++  P Y  A   RG +++ Q++
Sbjct: 1316 TEAIRIKPDDADFYFKRGDARDQSEDYSGAIADYTEAIRLKPDYTTAYYYRGISKSKQKD 1375

Query: 431  LEAAISDFTEAI 442
             +AAISD+++AI
Sbjct: 1376 YQAAISDYSQAI 1387


>gi|118400972|ref|XP_001032807.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89287152|gb|EAR85144.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 925

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 130/290 (44%), Gaps = 39/290 (13%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E L  +G     + + + AI  +T+AI+ NP   +A+  RG A   L     AI D S+A
Sbjct: 495 ENLHSQGFEMRKKGDFQKAIQLYTQAIELNPRHFKAFFNRGFAYDKLEMYDLAIADYSQA 554

Query: 476 LEFEPNS----------------------------------ADILHERGIVNFKFKDFNA 501
           LE +PN+                                  AD  H R     K K++  
Sbjct: 555 LEIDPNNAYAYYNRGISLDRKNLFDDAISNFTMAISLDDKKADFYHNRAFAYRKKKNYEM 614

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHLT 558
           A+ D +  +++D ++  AY         I  ++ AE  + +A+ L   + N L  +G L 
Sbjct: 615 AISDYTKAIEIDSKHFKAYYNRAFCFDKINNFESAESDYKQALMLQPKNINVLYHYGCLL 674

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           +      + E AL C  + L +D  ++ AY+ RGL+   L  + +A +D S+ + +  +N
Sbjct: 675 EKINTPQSLEDALICFNEALSLDSSYAPAYNARGLVYDKLKNYDQAYQDFSNAISLHQNN 734

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
              ++ RA C   +G+  EAI+D++AA  L+LDS    +   +    +++
Sbjct: 735 PVFIHNRACCLRNMGKLNEAIEDFNAA--LQLDSTNPIIYSNIGLVHRKL 782



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 11/273 (4%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
            DF  +R  A   +  Y  AIS + + ++ D  + +A   R          E+A SD+ +
Sbjct: 596 ADFYHNRAFAYRKKKNYEMAISDYTKAIEIDSKHFKAYYNRAFCFDKINNFESAESDYKQ 655

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDL-------SKALEFEPNSADILHERGIVN 493
           A+   P         G     L E +   Q L       ++AL  + + A   + RG+V 
Sbjct: 656 ALMLQPKNINVLYHYG----CLLEKINTPQSLEDALICFNEALSLDSSYAPAYNARGLVY 711

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            K K+++ A +D S  + L + N          L ++G+  +A E    A+QLD      
Sbjct: 712 DKLKNYDQAYQDFSNAISLHQNNPVFIHNRACCLRNMGKLNEAIEDFNAALQLDSTNPII 771

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           + ++   ++ L N E A+EC  + +      ++  + R      L  +K+A+ D +  L 
Sbjct: 772 YSNIGLVHRKLENFEHAIECYTKEMEYSTENARTINNRAYCFAKLKIYKEAVGDYTRALA 831

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           ++P NI  L+ R  CY  +G YR AI+D+ + +
Sbjct: 832 LEPKNIHALHNRGICYERMGLYRNAIEDFTSVI 864



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 101/221 (45%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           + LE A+  F EA+  + S   A+  RG     L    +A QD S A+    N+   +H 
Sbjct: 681 QSLEDALICFNEALSLDSSYAPAYNARGLVYDKLKNYDQAYQDFSNAISLHQNNPVFIHN 740

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           R          N A+ED +A ++LD  N   Y+ +GL    +  ++ A E + K ++   
Sbjct: 741 RACCLRNMGKLNEAIEDFNAALQLDSTNPIIYSNIGLVHRKLENFEHAIECYTKEMEYST 800

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
                  +    +  L   ++A+    + L ++ +   A H RG+    +G ++ AI+D 
Sbjct: 801 ENARTINNRAYCFAKLKIYKEAVGDYTRALALEPKNIHALHNRGICYERMGLYRNAIEDF 860

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +S +  +  N    + R  CY +IGE   AI DY  AL+++
Sbjct: 861 TSVISHNKDNANAYFNRGCCYDSIGELDLAIADYSTALEID 901



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 52/82 (63%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+A+     ++ ID+    AY++RG      G  +K I+D S  L +D S++  ++ RA+
Sbjct: 160 EQAINDTNTLISIDEYNVGAYYIRGCAYEKQGDIEKGIQDFSFVLELDASHVNAVFARAA 219

Query: 628 CYHAIGEYREAIKDYDAALDLE 649
           CY+ +G++ +AI+DY+ AL+L+
Sbjct: 220 CYNKLGDFNKAIEDYNKALELD 241



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           ISI  + L  DP + +AL  R ++   +   E AI+D    I  +     A+  RG A  
Sbjct: 129 ISICSKKLTIDPKHKKALYIRASSYMKKGLFEQAINDTNTLISIDEYNVGAYYIRGCAYE 188

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
             G+  + IQD S  LE + +  + +  R     K  DFN A+ED +  ++LD+E
Sbjct: 189 KQGDIEKGIQDFSFVLELDASHVNAVFARAACYNKLGDFNKAIEDYNKALELDQE 243



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 17/155 (10%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +KA++   Q + ++ R  KA+  RG     L  +  AI D S  L IDP+N    Y R  
Sbjct: 511 QKAIQLYTQAIELNPRHFKAFFNRGFAYDKLEMYDLAIADYSQALEIDPNNAYAYYNRGI 570

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT-ASKINSE-- 679
                  + +AI ++  A+ L+    + +  +  A+     Y+  I+ YT A +I+S+  
Sbjct: 571 SLDRKNLFDDAISNFTMAISLDDKKADFYHNRAFAYRKKKNYEMAISDYTKAIEIDSKHF 630

Query: 680 -------FCWFDIDGDIDPLFKEY-WCKRLHPKNV 706
                  FC FD   + +    +Y     L PKN+
Sbjct: 631 KAYYNRAFC-FDKINNFESAESDYKQALMLQPKNI 664



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 46/93 (49%)

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           L++ ++   N +  +    + L ID +  KA ++R       G  ++AI D ++ + ID 
Sbjct: 115 LSKSFRQTINVDNLISICSKKLTIDPKHKKALYIRASSYMKKGLFEQAINDTNTLISIDE 174

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            N+   Y+R   Y   G+  + I+D+   L+L+
Sbjct: 175 YNVGAYYIRGCAYEKQGDIEKGIQDFSFVLELD 207



 Score = 40.0 bits (92), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQD 71
           + K ++ I + +  +++DS     I + I L     L N+  AI      +  S E  + 
Sbjct: 748 MGKLNEAIEDFNAALQLDST-NPIIYSNIGLVHR-KLENFEHAIECYTKEMEYSTENART 805

Query: 72  ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           I NRA+C+++L+++K  + D  +AL L+P  + A   +G  +  +G    A+
Sbjct: 806 INNRAYCFAKLKIYKEAVGDYTRALALEPKNIHALHNRGICYERMGLYRNAI 857


>gi|17228118|ref|NP_484666.1| hypothetical protein alr0622 [Nostoc sp. PCC 7120]
 gi|17129968|dbj|BAB72580.1| alr0622 [Nostoc sp. PCC 7120]
          Length = 547

 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 115/228 (50%), Gaps = 4/228 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG++    G Y +AI+ + Q +  +    ++   RG A +     EAAI D+ +AI+ NP
Sbjct: 293 RGLSYYQLGDYEAAIADYSQAININLHDAKSYHKRGLALSQLAAYEAAIDDYNQAIRINP 352

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            A   +K R +AR+ LG++  AI+D ++A++  P  AD    RGI  +      A     
Sbjct: 353 HAASIYKNRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRYLL----ATQPGF 408

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +K++  + +AY   G A + IG+Y  A E + +AIQ++    +A+ +      DL +
Sbjct: 409 TQAIKINPNDANAYKNRGNARADIGDYLGAIEDYNQAIQINPKAADAYYNRGNARYDLGD 468

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            E A+    Q + I+  ++ AY+ RG +  G+   + AI D      I
Sbjct: 469 EEGAIADYTQAIQINPSYADAYYNRGNVRAGIKDKQGAIADFQKAADI 516



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 4/135 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R  A+ + G    AI  + Q +K +P Y +    RG +R     L A    FT+AI+ N
Sbjct: 360 NRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRY----LLATQPGFTQAIKIN 415

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+K RG ARA +G+ + AI+D ++A++  P +AD  + RG   +   D   A+ D
Sbjct: 416 PNDANAYKNRGNARADIGDYLGAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIAD 475

Query: 506 LSACVKLDKENKSAY 520
            +  ++++     AY
Sbjct: 476 YTQAIQINPSYADAY 490



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/351 (22%), Positives = 161/351 (45%), Gaps = 32/351 (9%)

Query: 354 MLKETSNEAKRN-----KKFCVTRISKSKSISVDFRLSRGIAQVNEG-------KYASAI 401
            +KE  NEA+ +       F  T++ K K+ ++ F    GI Q+  G       +   A 
Sbjct: 146 FIKEDVNEAQSSYHLLLAGFLPTQMIKLKTGNISF----GIEQLLYGGGLWGYLEQLQAS 201

Query: 402 SIFDQILKEDPMY-----PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           + + Q  +  P+Y     PE L      ++ +  L   I +     Q   +    + + G
Sbjct: 202 ANYHQFQQSPPIYQYKPQPELLSKINQTQSIKPALFTGIKNILPYRQQE-AINIDYIKIG 260

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
               A GE   +I++ S+AL+   ++ ++ ++RG+  ++  D+ AA+ D S  + ++  +
Sbjct: 261 DECFAQGEYTASIKNYSQALQASSDNCELYYKRGLSYYQLGDYEAAIADYSQAININLHD 320

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             +Y   GLALS +  Y+ A + + +AI+++ +    + +  +    L +++ A+E   Q
Sbjct: 321 AKSYHKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEARSHLGDNQGAIEDYTQ 380

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            + I+ +++  Y  RG+  + L          +  + I+P++      R +    IG+Y 
Sbjct: 381 AIKINPQYADTYKNRGISRYLLATQ----PGFTQAIKINPNDANAYKNRGNARADIGDYL 436

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAFY-----QKEIALYT-ASKINSEFC 681
            AI+DY+ A+ +   + + +  +  A Y     +  IA YT A +IN  + 
Sbjct: 437 GAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIADYTQAIQINPSYA 487



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 1/117 (0%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           F Q +K +P    A   RG ARA   +   AI D+ +AIQ NP A +A+  RG AR  LG
Sbjct: 408 FTQAIKINPNDANAYKNRGNARADIGDYLGAIEDYNQAIQINPKAADAYYNRGNARYDLG 467

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSA 519
           +   AI D ++A++  P+ AD  + RG V    KD   A+ D      +  KE K A
Sbjct: 468 DEEGAIADYTQAIQINPSYADAYYNRGNVRAGIKDKQGAIADFQKAADIYRKEGKLA 524


>gi|384209207|ref|YP_005594927.1| hypothetical protein Bint_1731 [Brachyspira intermedia PWS/A]
 gi|343386857|gb|AEM22347.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 357

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 132/268 (49%), Gaps = 1/268 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           SV+   +RG+A+ + G Y  AIS F++++  D  Y  A    G  +      E AI  + 
Sbjct: 37  SVEIYNNRGLAKSSLGMYEEAISDFEKVISIDAEYVNAYNNIGLVKHNLGMYEEAIDYYK 96

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +A+  +    +A+   G A   LG   EAI+   KA+E  PN     +  G++      +
Sbjct: 97  KALSLDNKCIQAFNNIGLANHNLGMYEEAIKYYIKAIEISPN-VHTYNNIGLIKNDLGMY 155

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+E  +  ++LD     AY  +GL+  ++ +Y +A E   K ++LD   + ++ ++  
Sbjct: 156 EEAIEYFNKVIRLDNNYIKAYYNIGLSKYNLKKYDEALEYFNKVLELDSKNIHSYNNIGI 215

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             QDL    +ALE   + L +DK +SKAY+ RGL    L  ++ A+ D +  L ++P+  
Sbjct: 216 IKQDLKQHSEALEYFNKALALDKNYSKAYYNRGLSELELELYECALYDFNRCLELEPNYY 275

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALD 647
                R      +  YREA++D++  ++
Sbjct: 276 PACCKRGEVKLKLKNYREALEDFNYYIE 303



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 99/191 (51%), Gaps = 13/191 (6%)

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           ++++   K + +  +S +I + RG+       +  A+ D    + +D E  +AY  +GL 
Sbjct: 22  KSLEYFDKLIFYYGDSVEIYNNRGLAKSSLGMYEEAISDFEKVISIDAEYVNAYNNIGLV 81

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
             ++G Y++A + + KA+ LD   ++A+ ++     +L   E+A++   + + I      
Sbjct: 82  KHNLGMYEEAIDYYKKALSLDNKCIQAFNNIGLANHNLGMYEEAIKYYIKAIEISPNVH- 140

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            Y+  GL+ + LG +++AI+  +  + +D +     Y++A  Y+ IG  +  +K YD AL
Sbjct: 141 TYNNIGLIKNDLGMYEEAIEYFNKVIRLDNN-----YIKA--YYNIGLSKYNLKKYDEAL 193

Query: 647 D-----LELDS 652
           +     LELDS
Sbjct: 194 EYFNKVLELDS 204



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 81/161 (50%), Gaps = 8/161 (4%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GLA SS+G Y++A     K I +D  ++ A+ ++     +L   E+A++  ++ L +D +
Sbjct: 45  GLAKSSLGMYEEAISDFEKVISIDAEYVNAYNNIGLVKHNLGMYEEAIDYYKKALSLDNK 104

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
             +A++  GL  H LG +++AIK     + I P N+          + +G Y EAI+ ++
Sbjct: 105 CIQAFNNIGLANHNLGMYEEAIKYYIKAIEISP-NVHTYNNIGLIKNDLGMYEEAIEYFN 163

Query: 644 AALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
             + L+ + ++       A+Y   ++ Y   K +    +F+
Sbjct: 164 KVIRLDNNYIK-------AYYNIGLSKYNLKKYDEALEYFN 197


>gi|284123878|ref|ZP_06386955.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283829235|gb|EFC33646.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
          Length = 237

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 106/220 (48%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S    + +G    ++G Y SAI  +D+ +  +P        RG A+    +   AISD+ 
Sbjct: 13  SAQNHVDKGNTLYDQGDYKSAILAYDKAINLNPNLAITYFKRGNAKYSIEQYPEAISDYD 72

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           EAI+      E +  RG A+  +G+  EAI D ++A+   PN++   + RGI        
Sbjct: 73  EAIRLGIDKAEVYNNRGYAKDEIGQYFEAISDYTEAIRLNPNNSVAYNNRGIAKVNLGHP 132

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
            AA+ D    ++LD  N +AY   G A   IG+Y +A   + +AI+L+  +  A+     
Sbjct: 133 EAAISDYDEAIRLDPNNANAYNNRGYAKDEIGQYFEAISDYTEAIRLNPKYANAYNCRGI 192

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
              +L +SE A+    + + ++   +K Y+ RG+    LG
Sbjct: 193 AKVNLGHSEAAISDFDEAIRLNPNEAKVYNNRGIANRKLG 232



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 89/205 (43%)

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
           SN  + +    +G      G+   AI    KA+   PN A    +RG   +  + +  A+
Sbjct: 9   SNIESAQNHVDKGNTLYDQGDYKSAILAYDKAINLNPNLAITYFKRGNAKYSIEQYPEAI 68

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D    ++L  +    Y   G A   IG+Y +A   + +AI+L+ N   A+ +      +
Sbjct: 69  SDYDEAIRLGIDKAEVYNNRGYAKDEIGQYFEAISDYTEAIRLNPNNSVAYNNRGIAKVN 128

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L + E A+    + + +D   + AY+ RG     +GQ+ +AI D +  + ++P       
Sbjct: 129 LGHPEAAISDYDEAIRLDPNNANAYNNRGYAKDEIGQYFEAISDYTEAIRLNPKYANAYN 188

Query: 624 LRASCYHAIGEYREAIKDYDAALDL 648
            R      +G    AI D+D A+ L
Sbjct: 189 CRGIAKVNLGHSEAAISDFDEAIRL 213



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/83 (38%), Positives = 47/83 (56%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+   G+Y  AIS + + ++ +P Y  A   RG A+      EAAISDF EAI+ N
Sbjct: 155 NRGYAKDEIGQYFEAISDYTEAIRLNPKYANAYNCRGIAKVNLGHSEAAISDFDEAIRLN 214

Query: 446 PSAGEAWKRRGQARAALGESVEA 468
           P+  + +  RG A   LG + +A
Sbjct: 215 PNEAKVYNNRGIANRKLGLTADA 237



 Score = 41.6 bits (96), Expect = 2.6,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 14/140 (10%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFL-------EAWGHLTQFYQDLANSEKALECLQQ 576
           G  L   G+YK A  A+ KAI L+ N          A   + Q+ + +++ ++A+     
Sbjct: 21  GNTLYDQGDYKSAILAYDKAINLNPNLAITYFKRGNAKYSIEQYPEAISDYDEAIR---- 76

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L IDK  ++ Y+ RG     +GQ+ +AI D +  + ++P+N      R      +G   
Sbjct: 77  -LGIDK--AEVYNNRGYAKDEIGQYFEAISDYTEAIRLNPNNSVAYNNRGIAKVNLGHPE 133

Query: 637 EAIKDYDAALDLELDSMEKF 656
            AI DYD A+ L+ ++   +
Sbjct: 134 AAISDYDEAIRLDPNNANAY 153


>gi|427738006|ref|YP_007057550.1| hypothetical protein Riv7116_4584 [Rivularia sp. PCC 7116]
 gi|427373047|gb|AFY57003.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
          Length = 247

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/160 (33%), Positives = 88/160 (55%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G  ++ +G Y  AI+   ++++ +P    A   RG ARA  ++ + AI+DFT+ IQ NP+
Sbjct: 56  GNKRLEKGDYQGAIADLTKVIQINPQLAPAYYNRGVARAQLQDNQGAIADFTKVIQFNPN 115

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA+  RG A   L ++  AI D +K ++F PN     +ERG    K +D+  A+ D S
Sbjct: 116 DTEAYYNRGVALHQLQDNQGAIADFTKVIQFNPNDFKAYNERGNARLKLRDYQTAIADFS 175

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
             ++++ +    Y   G+A S + +Y+ A     KAIQL+
Sbjct: 176 KAIQINPKIDITYYNRGIARSRLEDYQTAIADFTKAIQLN 215



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 11/218 (5%)

Query: 329 SKSSISDNKSSDSTESRSKLSFKW----DMLKETSNEAKRNKK--FCVTRISKSKSISVD 382
           SK++ +   S++  +  SKL        D L+   N  KR +K  +       +K I ++
Sbjct: 20  SKANATGLPSTNQLKPESKLQLAQANPQDALEYFKNGNKRLEKGDYQGAIADLTKVIQIN 79

Query: 383 FRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
            +L+     RG+A+        AI+ F ++++ +P   EA   RG A    ++ + AI+D
Sbjct: 80  PQLAPAYYNRGVARAQLQDNQGAIADFTKVIQFNPNDTEAYYNRGVALHQLQDNQGAIAD 139

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           FT+ IQ NP+  +A+  RG AR  L +   AI D SKA++  P      + RGI   + +
Sbjct: 140 FTKVIQFNPNDFKAYNERGNARLKLRDYQTAIADFSKAIQINPKIDITYYNRGIARSRLE 199

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           D+  A+ D +  ++L+ ++  AY   G+A   +  ++K
Sbjct: 200 DYQTAIADFTKAIQLNPQSDIAYYNRGVARRKLKAHRK 237



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 86/195 (44%)

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           Q+NP     + + G  R   G+   AI DL+K ++  P  A   + RG+   + +D   A
Sbjct: 43  QANPQDALEYFKNGNKRLEKGDYQGAIADLTKVIQINPQLAPAYYNRGVARAQLQDNQGA 102

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D +  ++ +  +  AY   G+AL  + + + A     K IQ + N  +A+        
Sbjct: 103 IADFTKVIQFNPNDTEAYYNRGVALHQLQDNQGAIADFTKVIQFNPNDFKAYNERGNARL 162

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            L + + A+    + + I+ +    Y+ RG+    L  ++ AI D +  + ++P +    
Sbjct: 163 KLRDYQTAIADFSKAIQINPKIDITYYNRGIARSRLEDYQTAIADFTKAIQLNPQSDIAY 222

Query: 623 YLRASCYHAIGEYRE 637
           Y R      +  +R+
Sbjct: 223 YNRGVARRKLKAHRK 237



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 7/172 (4%)

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           D+  A+ DL+  ++++ +   AY   G+A + + + + A     K IQ + N  EA+ + 
Sbjct: 64  DYQGAIADLTKVIQINPQLAPAYYNRGVARAQLQDNQGAIADFTKVIQFNPNDTEAYYNR 123

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                 L +++ A+    +V+  +    KAY+ RG     L  ++ AI D S  + I+P 
Sbjct: 124 GVALHQLQDNQGAIADFTKVIQFNPNDFKAYNERGNARLKLRDYQTAIADFSKAIQINPK 183

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
                Y R      + +Y+ AI D+  A+ L   S        +A+Y + +A
Sbjct: 184 IDITYYNRGIARSRLEDYQTAIADFTKAIQLNPQSD-------IAYYNRGVA 228


>gi|425452343|ref|ZP_18832160.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 7941]
 gi|389765891|emb|CCI08329.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 7941]
          Length = 436

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 139/296 (46%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T+I++  +       +RG+  + + KY  A++ F + +  +P Y EA + RG     Q +
Sbjct: 35  TQIAQGNNQDAIGHYNRGVDYIQQEKYDLALAEFTKAININPRYAEAYLNRGFLYEQQEK 94

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + A+SDF +AI  NP   EA+  RG      G+S  A+ D ++AL   P +A   + RG
Sbjct: 95  PDLALSDFNQAININPRLAEAYNNRGLLYYEQGKSDLALSDFNQALNINPRNATAYYNRG 154

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            +  +    + A+ D +  + ++  +  AY   G      G+   A   + +A+ ++  +
Sbjct: 155 NLYKEQGKPDLALFDYNQALNINPRDAEAYLNRGFLYHEQGKPDLALFDYNQALNINPLY 214

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +    Y +    + AL    Q + I+ R++ AY+ RGLL    G+   A+ D + 
Sbjct: 215 ALAYLNRGNLYHEQGKPDLALSDFNQAININPRYAMAYNNRGLLYQQQGKLNLALFDYNQ 274

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            + I+P        R   Y   G+   A+ D++ A+++     E +  + L +Y++
Sbjct: 275 AININPRYAMAYLNRGVLYAVQGKPDLALSDFNQAININPRLAEAYNNRGLLYYEQ 330



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 145/327 (44%), Gaps = 27/327 (8%)

Query: 361 EAKRNKKFCVTRISK--------SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQI 407
           EA  N+ F   +  K        +++I+++ RL+     RG+    +GK   A+S F+Q 
Sbjct: 80  EAYLNRGFLYEQQEKPDLALSDFNQAININPRLAEAYNNRGLLYYEQGKSDLALSDFNQA 139

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           L  +P    A   RG     Q + + A+ D+ +A+  NP   EA+  RG      G+   
Sbjct: 140 LNINPRNATAYYNRGNLYKEQGKPDLALFDYNQALNINPRDAEAYLNRGFLYHEQGKPDL 199

Query: 468 AIQDLSKALEFEP-------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
           A+ D ++AL   P       N  ++ HE+G  +    DFN A+        ++     AY
Sbjct: 200 ALFDYNQALNINPLYALAYLNRGNLYHEQGKPDLALSDFNQAI-------NINPRYAMAY 252

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL     G+   A   + +AI ++  +  A+ +    Y      + AL    Q + I
Sbjct: 253 NNRGLLYQQQGKLNLALFDYNQAININPRYAMAYLNRGVLYAVQGKPDLALSDFNQAINI 312

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           + R ++AY+ RGLL +  G+   A+ D +  + I+P   +    R   Y   G+   A+ 
Sbjct: 313 NPRLAEAYNNRGLLYYEQGKSDLALSDYNQAININPGYAQAYLNRGVLYAVQGKPDLALS 372

Query: 641 DYDAALDLELDSMEKFVLQCLAFYQKE 667
           DY+ A+++     + +  + + +Y ++
Sbjct: 373 DYNQAININPREAQAYANRGVLYYYRQ 399



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 7/281 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG     +GK   A+  ++Q L  +P   EA + RG     Q + + A+ D+ +A+  N
Sbjct: 152 NRGNLYKEQGKPDLALFDYNQALNINPRDAEAYLNRGFLYHEQGKPDLALFDYNQALNIN 211

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG      G+   A+ D ++A+   P  A   + RG++  +    N A+ D
Sbjct: 212 PLYALAYLNRGNLYHEQGKPDLALSDFNQAININPRYAMAYNNRGLLYQQQGKLNLALFD 271

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + ++     AY   G+  +  G+   A     +AI ++    EA+ +    Y +  
Sbjct: 272 YNQAININPRYAMAYLNRGVLYAVQGKPDLALSDFNQAININPRLAEAYNNRGLLYYEQG 331

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            S+ AL    Q + I+  +++AY  RG+L    G+   A+ D +  + I+P   +    R
Sbjct: 332 KSDLALSDYNQAININPGYAQAYLNRGVLYAVQGKPDLALSDYNQAININPREAQAYANR 391

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
              Y+   E  +AI+D   A +L       F  Q  AFY++
Sbjct: 392 GVLYYYRQEREKAIRDLRQAAEL-------FRQQGDAFYEE 425



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 34/224 (15%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG     +GK   A+S F+Q +  +P Y  A   RG     Q +L  A+ D+ +AI  
Sbjct: 219 LNRGNLYHEQGKPDLALSDFNQAININPRYAMAYNNRGLLYQQQGKLNLALFDYNQAINI 278

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A+  RG   A  G+   A+ D ++A+   P  A+  + RG++ ++    + A+ 
Sbjct: 279 NPRYAMAYLNRGVLYAVQGKPDLALSDFNQAININPRLAEAYNNRGLLYYEQGKSDLALS 338

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  + ++     AY   G+               L A+Q                   
Sbjct: 339 DYNQAININPGYAQAYLNRGV---------------LYAVQ------------------- 364

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              + AL    Q + I+ R ++AY  RG+L +   + +KAI+DL
Sbjct: 365 GKPDLALSDYNQAININPREAQAYANRGVLYYYRQEREKAIRDL 408


>gi|428298012|ref|YP_007136318.1| hypothetical protein Cal6303_1286 [Calothrix sp. PCC 6303]
 gi|428234556|gb|AFZ00346.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 839

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 140/289 (48%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           ++S SV+  L +G   ++ G+  +A+ IF Q    +P     L   G A       + +I
Sbjct: 2   TQSSSVETLLEQGYDLLDRGQEQTALEIFQQAATLEPQNHRVLYALGLALYRLESYQNSI 61

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
              T+A++  PS   A  RRG A   L +  EA  D  +A++ +P + +    RGI   +
Sbjct: 62  EYLTQALEIQPSYILALARRGMAYTKLDQVEEAKADFERAIQIQPINHEDYLGRGIAFDE 121

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
            K +  A+ D +  + L  ++ + Y   G A +++  Y++A   + +A+ L  ++  A+ 
Sbjct: 122 LKRYEEAIADFNQALILKPDDYNTYFNRGYAFNNLERYEEAIADYNQALILKPDYYNAYF 181

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           +    +++L   E+A+    Q L +      AY  RG +  GL ++++AI + +  L + 
Sbjct: 182 NRGITFRNLERYEEAIADYNQALILKPDDYDAYFNRGYVFDGLKRYEEAIANYNQALILK 241

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
           P + E L  RA   + +  Y EAI D + AL ++ D    + ++  +++
Sbjct: 242 PDSYEYLSKRACALNNLRRYEEAILDCNKALAIKTDDFYVYYVKAYSYH 290



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 34/247 (13%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A     +   A + F++ ++  P+  E  +GRG A    +  E AI+DF +A+   P
Sbjct: 81  RGMAYTKLDQVEEAKADFERAIQIQPINHEDYLGRGIAFDELKRYEEAIADFNQALILKP 140

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG A   L    EAI D ++AL  +P+  +    RGI     + +  A+ D 
Sbjct: 141 DDYNTYFNRGYAFNNLERYEEAIADYNQALILKPDYYNAYFNRGITFRNLERYEEAIADY 200

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + L  ++  AY   G     +  Y++A   + +A+ L  +  E              
Sbjct: 201 NQALILKPDDYDAYFNRGYVFDGLKRYEEAIANYNQALILKPDSYE-------------- 246

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
                       Y+ K        R   L+ L ++++AI D +  L I   +    Y++A
Sbjct: 247 ------------YLSK--------RACALNNLRRYEEAILDCNKALAIKTDDFYVYYVKA 286

Query: 627 SCYHAIG 633
             YH  G
Sbjct: 287 YSYHWQG 293



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 5/181 (2%)

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+E       L+ +N      LGLAL  +  Y+ + E   +A+++  +++ A       
Sbjct: 25  TALEIFQQAATLEPQNHRVLYALGLALYRLESYQNSIEYLTQALEIQPSYILALARRGMA 84

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y  L   E+A    ++ + I     + Y  RG+    L ++++AI D +  L + P +  
Sbjct: 85  YTKLDQVEEAKADFERAIQIQPINHEDYLGRGIAFDELKRYEEAIADFNQALILKPDDYN 144

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYTASK 675
             + R   ++ +  Y EAI DY+ AL L+ D    +  + + F     Y++ IA Y  + 
Sbjct: 145 TYFNRGYAFNNLERYEEAIADYNQALILKPDYYNAYFNRGITFRNLERYEEAIADYNQAL 204

Query: 676 I 676
           I
Sbjct: 205 I 205



 Score = 40.4 bits (93), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 29/51 (56%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
           NR + ++ LE ++  I D ++AL L P    AY  +G  F  L R EEA++
Sbjct: 148 NRGYAFNNLERYEEAIADYNQALILKPDYYNAYFNRGITFRNLERYEEAIA 198


>gi|428319180|ref|YP_007117062.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428242860|gb|AFZ08646.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 400

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 118/268 (44%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R ++G+A    G+   AI+ +++ L   P  PEA   R         L  AI+ + +AI+
Sbjct: 62  RYNQGVALKKLGQLEEAIAAYNKSLTIKPNNPEAWYNRANVLRKLNRLSEAIASYEKAIE 121

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
             PS  EAW  RG    +L +  EAI    KA+  +P+  +  + +     K     AA+
Sbjct: 122 LKPSYREAWTNRGNTLVSLEKFSEAIASYEKAIAIKPDYCEAWYNKAFALRKSDQNTAAI 181

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                 ++L  +   A+   GLAL+    Y +A  ++ K +QL  N   AW         
Sbjct: 182 ASYDKAIELKPDLHQAWYNRGLALADEKLYPEAVASYDKTLQLRPNSAAAWNKRGTAIAQ 241

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           +   E A+    + L +    S+ ++ RGL L  L + ++AI      L + P N E  Y
Sbjct: 242 MGKFEAAIASWDKALALKPNDSETFYNRGLALANLQRFEEAIASWDKTLELHPDNTEAWY 301

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            RA     I  + EAI  YD  + L+ D
Sbjct: 302 NRAIALKKIQRFTEAIASYDKIIALKPD 329



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/316 (23%), Positives = 137/316 (43%), Gaps = 12/316 (3%)

Query: 374 SKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           S  KSI+V+ +       RG A    G++ +AI  +++ ++ +P + EA   +G A    
Sbjct: 13  SGEKSIAVNTQKAQILYERGNALEAMGRFQAAIESWEEAIELEPKFYEARYNQGVALKKL 72

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            +LE AI+ + +++   P+  EAW  R      L    EAI    KA+E +P+  +    
Sbjct: 73  GQLEEAIAAYNKSLTIKPNNPEAWYNRANVLRKLNRLSEAIASYEKAIELKPSYREAWTN 132

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG      + F+ A+      + +  +   A+     AL    +   A  ++ KAI+L  
Sbjct: 133 RGNTLVSLEKFSEAIASYEKAIAIKPDYCEAWYNKAFALRKSDQNTAAIASYDKAIELKP 192

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           +  +AW +      D     +A+    + L +    + A++ RG  +  +G+ + AI   
Sbjct: 193 DLHQAWYNRGLALADEKLYPEAVASYDKTLQLRPNSAAAWNKRGTAIAQMGKFEAAIASW 252

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
              L + P++ E  Y R      +  + EAI  +D  L+L  D+ E       A+Y + I
Sbjct: 253 DKALALKPNDSETFYNRGLALANLQRFEEAIASWDKTLELHPDNTE-------AWYNRAI 305

Query: 669 ALYTASKINSEFCWFD 684
           AL    +       +D
Sbjct: 306 ALKKIQRFTEAIASYD 321



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 123/283 (43%), Gaps = 7/283 (2%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L  RG A       +AAI  + EAI+  P   EA   +G A   LG+  EAI   +K+L 
Sbjct: 28  LYERGNALEAMGRFQAAIESWEEAIELEPKFYEARYNQGVALKKLGQLEEAIAAYNKSLT 87

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
            +PN+ +  + R  V  K    + A+      ++L    + A+T  G  L S+ ++ +A 
Sbjct: 88  IKPNNPEAWYNRANVLRKLNRLSEAIASYEKAIELKPSYREAWTNRGNTLVSLEKFSEAI 147

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
            ++ KAI +  ++ EAW +     +    +  A+    + + +     +A++ RGL L  
Sbjct: 148 ASYEKAIAIKPDYCEAWYNKAFALRKSDQNTAAIASYDKAIELKPDLHQAWYNRGLALAD 207

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
              + +A+      L + P++      R +    +G++  AI  +D AL L+ +  E   
Sbjct: 208 EKLYPEAVASYDKTLQLRPNSAAAWNKRGTAIAQMGKFEAAIASWDKALALKPNDSE--- 264

Query: 658 LQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                FY + +AL    +       +D   ++ P   E W  R
Sbjct: 265 ----TFYNRGLALANLQRFEEAIASWDKTLELHPDNTEAWYNR 303



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  +E  Y  A++ +D+ L+  P    A   RGTA A   + EAAI+ + +A+   
Sbjct: 200 NRGLALADEKLYPEAVASYDKTLQLRPNSAAAWNKRGTAIAQMGKFEAAIASWDKALALK 259

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  E +  RG A A L    EAI    K LE  P++ +  + R I   K + F  A+  
Sbjct: 260 PNDSETFYNRGLALANLQRFEEAIASWDKTLELHPDNTEAWYNRAIALKKIQRFTEAIAS 319

Query: 506 LSACVKLDKENKSAY 520
               + L  ++ + Y
Sbjct: 320 YDKIIALKPDDPNLY 334



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/222 (21%), Positives = 89/222 (40%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           +E  I    ++I  N    +    RG A  A+G    AI+   +A+E EP   +  + +G
Sbjct: 7   IEKPIDSGEKSIAVNTQKAQILYERGNALEAMGRFQAAIESWEEAIELEPKFYEARYNQG 66

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +   K      A+   +  + +   N  A+      L  +    +A  ++ KAI+L  ++
Sbjct: 67  VALKKLGQLEEAIAAYNKSLTIKPNNPEAWYNRANVLRKLNRLSEAIASYEKAIELKPSY 126

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            EAW +       L    +A+   ++ + I   + +A++ +   L    Q+  AI     
Sbjct: 127 REAWTNRGNTLVSLEKFSEAIASYEKAIAIKPDYCEAWYNKAFALRKSDQNTAAIASYDK 186

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
            + + P   +  Y R         Y EA+  YD  L L  +S
Sbjct: 187 AIELKPDLHQAWYNRGLALADEKLYPEAVASYDKTLQLRPNS 228



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/139 (20%), Positives = 68/139 (48%), Gaps = 7/139 (5%)

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           Q LA+ EK ++  ++ + ++ + ++  + RG  L  +G+ + AI+     + ++P   E 
Sbjct: 2   QKLASIEKPIDSGEKSIAVNTQKAQILYERGNALEAMGRFQAAIESWEEAIELEPKFYEA 61

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFC 681
            Y +      +G+  EAI  Y+ +L ++ ++ E       A+Y +   L   ++++    
Sbjct: 62  RYNQGVALKKLGQLEEAIAAYNKSLTIKPNNPE-------AWYNRANVLRKLNRLSEAIA 114

Query: 682 WFDIDGDIDPLFKEYWCKR 700
            ++   ++ P ++E W  R
Sbjct: 115 SYEKAIELKPSYREAWTNR 133


>gi|150007314|ref|YP_001302057.1| hypothetical protein BDI_0659 [Parabacteroides distasonis ATCC
           8503]
 gi|149935738|gb|ABR42435.1| putative exported Tpr repeat-family protein [Parabacteroides
           distasonis ATCC 8503]
          Length = 707

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 128/289 (44%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           IS    I+ D  L+ G   +    Y  +I  F+Q++K  P   E    R  A+    + +
Sbjct: 15  ISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFK 74

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            A  D T  +Q NP   +A+  RG AR +  +  EAI D  K LEF+P    +L    + 
Sbjct: 75  GAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVA 134

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             + KD+N A +     +    +    Y   G      G+  KA   + KAI++D  +  
Sbjct: 135 FIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAP 194

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A+G+    +  + + + AL  L + L +D R S  Y  RGL+ + +   + A+ D    +
Sbjct: 195 AYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVI 254

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
            +D  N+   + R      +G+   AI+D+D  +  E D+   +  + L
Sbjct: 255 SMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRAL 303



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +D ++K +P +  A   R   R  QR+  AAI D+ EAI+ +P   EA+  RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677

Query: 464 ESVEAIQDLSKALEF 478
           +    I DLSKA E 
Sbjct: 678 DVNRGIADLSKAGEL 692



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 76/170 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG   + +G    A++ +++ ++ DP Y  A   R        + + A++D  EA++ 
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  RG  R  + +   A+ D  + +  +  +      RG++ F+  D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    ++ + +N  AY    L     G+Y+ A + +   ++    FL  +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332



 Score = 42.7 bits (99), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 2/98 (2%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P + + +   RA+  E E  + D+   I+ NP    A+  R   R A  +   AI D ++
Sbjct: 597 PRSAMLKDNKRAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNE 654

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
           A+E +P  A+  + RG+      D N  + DLS   +L
Sbjct: 655 AIERDPEFAEAYYNRGLARLSQGDVNRGIADLSKAGEL 692



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 55/137 (40%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + ++RG+ +        A++ +DQ++  D     A   RG  R    +   AI DF   I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           Q  P    A+  R   R   G+   A+QD    L+  P        R     K  D   A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348

Query: 503 VEDLSACVKLDKENKSA 519
             D  A +K++++ K+ 
Sbjct: 349 DRDYWAAIKMEEQAKNG 365



 Score = 39.7 bits (91), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 57/278 (20%), Positives = 117/278 (42%), Gaps = 18/278 (6%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R +RG+ +   G    AI  FD +++++P    A   R   R    +   A+ D+   ++
Sbjct: 264 RFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLK 323

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
             P+    +  R +A+  LG++V A +D   A++ E  + +      I        N AV
Sbjct: 324 QYPTFLPGFVSRSEAKRKLGDNVGADRDYWAAIKMEEQAKN----GQIPKTSSSGSNTAV 379

Query: 504 E-----DLSACVKLDKENKSAYTYLGLALSSIGEYKKAE-EAHLKAIQLDRNF---LEAW 554
                 D S     ++ +K+   +  L +    + +K++ ++ ++    DRN    LE  
Sbjct: 380 NGDAKTDDSEENTREQSDKNINKFNRLVVYDKEQERKSKYQSEVRGRVQDRNVHVDLEPQ 439

Query: 555 GHLTQF-----YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             LT +      + L   +K +E     + + ++         L    +  H  +I + S
Sbjct: 440 FVLTYYEKADPVKKLVYYDKMVEDYNGQMVLKRKLRITNEEAALTEDQIAVHFASIDEYS 499

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           + +  DP+N    + RA  +  + ++ EAIK +  A++
Sbjct: 500 AEIERDPNNANAYFGRAMDFMLVQDFSEAIKSFSEAIE 537


>gi|262382113|ref|ZP_06075251.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
 gi|262297290|gb|EEY85220.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
          Length = 707

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 129/292 (44%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           +  IS    I+ D  L+ G   +    Y  +I  F+Q++K  P   E    R  A+    
Sbjct: 12  IFTISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLD 71

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + + A  D T  +Q NP   +A+  RG AR +  +  EAI D  K LEF+P    +L   
Sbjct: 72  DFKGAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNM 131

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            +   + KD+N A +     +    +    Y   G      G+  KA   + KAI++D  
Sbjct: 132 AVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPY 191

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           +  A+G+    +  + + + AL  L + L +D R S  Y  RGL+ + +   + A+ D  
Sbjct: 192 YAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYD 251

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             + +D  N+   + R      +G+   AI+D+D  +  E D+   +  + L
Sbjct: 252 QVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRAL 303



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +D ++K +P +  A   R   R  QR+  AAI D+ EAI+ +P   EA+  RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677

Query: 464 ESVEAIQDLSKALEF 478
           +    I DLSKA E 
Sbjct: 678 DVNRGIADLSKAGEL 692



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E E  + D+   I+ NP    A+  R   R A  +   AI D ++A+E +P  A+  + R
Sbjct: 610 EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNR 669

Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
           G+      D N  + DLS   +L
Sbjct: 670 GLARLSQGDVNRGIADLSKAGEL 692



 Score = 40.4 bits (93), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 55/137 (40%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + ++RG+ +        A++ +DQ++  D     A   RG  R    +   AI DF   I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           Q  P    A+  R   R   G+   A+QD    L+  P        R     K  D   A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYWGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348

Query: 503 VEDLSACVKLDKENKSA 519
             D  A +K++++ K+ 
Sbjct: 349 DRDYWAAIKMEEQAKNG 365


>gi|423348133|ref|ZP_17325818.1| hypothetical protein HMPREF1060_03490 [Parabacteroides merdae
           CL03T12C32]
 gi|409215095|gb|EKN08102.1| hypothetical protein HMPREF1060_03490 [Parabacteroides merdae
           CL03T12C32]
          Length = 707

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 7/318 (2%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           F +  ++    I+ D  L+ G   +    Y  +I  F+Q++K  P   E    R  A+  
Sbjct: 10  FQLCSLAMFAQINTDRVLTIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKIN 69

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
             + + A  D T  ++ NP   +A+  RG AR +  +  EAI+D  K LEF+     +L 
Sbjct: 70  LDDYKGAEEDCTLCLERNPFLVQAYYARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLV 129

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
              + N + KDF  A +     +    +    Y   G   +  G+  KA   + KAI +D
Sbjct: 130 NMAVANIQKKDFKEAEKVFDELMAAHPKYSMNYLTRGAMYTEKGDTVKALADYDKAISMD 189

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
             +  A+G+    +  + N + AL  L + + ++ R S  Y  RGL+ + L   + A+ D
Sbjct: 190 PYYAPAYGNRAILHYQMNNMKDALADLNEAIRLNTRESGYYINRGLVRYQLKDLRGAMAD 249

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
               + +D  N+   + R      IG+   AI+D+D  +++E D+        +A+Y + 
Sbjct: 250 YDQVVSMDSHNLIARFNRGLLRAQIGDNNRAIEDFDVVIEIEPDN-------YMAYYNRA 302

Query: 668 IALYTASKINSEFCWFDI 685
           +  Y           FD+
Sbjct: 303 LLRYETGDYQGSVHDFDV 320



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 113/261 (43%), Gaps = 34/261 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+ ++ K+  AI  + + L+      + L+    A   +++ + A   F E + ++
Sbjct: 96  ARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLVNMAVANIQKKDFKEAEKVFDELMAAH 155

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG      G++V+A+ D  KA+  +P  A     R I++++  +   A+ D
Sbjct: 156 PKYSMNYLTRGAMYTEKGDTVKALADYDKAISMDPYYAPAYGNRAILHYQMNNMKDALAD 215

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L+  ++L+      Y   GL    + + + A   + + + +D + L A            
Sbjct: 216 LNEAIRLNTRESGYYINRGLVRYQLKDLRGAMADYDQVVSMDSHNLIA------------ 263

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
                            RF+     RGLL   +G + +AI+D    + I+P N    Y R
Sbjct: 264 -----------------RFN-----RGLLRAQIGDNNRAIEDFDVVIEIEPDNYMAYYNR 301

Query: 626 ASCYHAIGEYREAIKDYDAAL 646
           A   +  G+Y+ ++ D+D  L
Sbjct: 302 ALLRYETGDYQGSVHDFDVVL 322



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 106/265 (40%), Gaps = 34/265 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++  +A + +  +  A  +FD+++   P Y    + RG     + +   A++D+ +AI  
Sbjct: 129 VNMAVANIQKKDFKEAEKVFDELMAAHPKYSMNYLTRGAMYTEKGDTVKALADYDKAISM 188

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+  R      +    +A+ DL++A+      +     RG+V ++ KD   A+ 
Sbjct: 189 DPYYAPAYGNRAILHYQMNNMKDALADLNEAIRLNTRESGYYINRGLVRYQLKDLRGAMA 248

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    V +D  N  A    GL  + IG+                                
Sbjct: 249 DYDQVVSMDSHNLIARFNRGLLRAQIGD-------------------------------- 276

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             + +A+E    V+ I+     AY+ R LL +  G ++ ++ D    L   P+ +   Y 
Sbjct: 277 --NNRAIEDFDVVIEIEPDNYMAYYNRALLRYETGDYQGSVHDFDVVLRQYPNFVAGYYS 334

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           RA     + +   A +DY  A ++E
Sbjct: 335 RAEVKRKMHDEVGADRDYWTAYNME 359



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +D ++K +P +  A   RG  R  QR+  AAI D++EAIQ +P   EA+  RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAEAYFNRGLARLSQG 677

Query: 464 ESVEAIQDLSKALEF 478
           ++   I DLSKA E 
Sbjct: 678 DANRGIADLSKAGEL 692



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 24/203 (11%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           A+I +F+  I  NP+  +A+  R      + +  EAI+D +K +E +P+ A     R +V
Sbjct: 495 ASIDNFSARIVKNPNDVDAYFGRALDFMLVQDFTEAIKDYTKVIELDPDFAMAYFNRAVV 554

Query: 493 NFKFKDFN-----AAVEDLSAC---VKLDKENKSAYTYL--GLALSSIGEYKKAEEAHL- 541
            +K  D+N     ++ +D SA    +K+ K      T +    A +S+ + K+A E  + 
Sbjct: 555 RYKQLDYNMSQAASSQDDFSAMSMNLKMGKNPTVVRTPVTSDPASASLKDNKRAYEHEMI 614

Query: 542 -----KAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
                  I+L+  F+ A+   G+L    +D      A++   + +  D  F++AY  RGL
Sbjct: 615 TRDYDMVIKLNPGFVYAYFNRGNLRCAQRDF---RAAIQDYSEAIQRDPEFAEAYFNRGL 671

Query: 594 LLHGLGQHKKAIKDLSSG--LGI 614
                G   + I DLS    LGI
Sbjct: 672 ARLSQGDANRGIADLSKAGELGI 694



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           RA++ E+     D+   I+ NP    A+  RG  R A  +   AIQD S+A++ +P  A+
Sbjct: 607 RAYEHEM--ITRDYDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAE 664

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
               RG+      D N  + DLS   +L
Sbjct: 665 AYFNRGLARLSQGDANRGIADLSKAGEL 692



 Score = 43.9 bits (102), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 64/335 (19%), Positives = 122/335 (36%), Gaps = 53/335 (15%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + ++RG+ +        A++ +DQ++  D     A   RG  RA   +   AI DF   I
Sbjct: 229 YYINRGLVRYQLKDLRGAMADYDQVVSMDSHNLIARFNRGLLRAQIGDNNRAIEDFDVVI 288

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +  P    A+  R   R   G+   ++ D    L   PN     + R  V  K  D   A
Sbjct: 289 EIEPDNYMAYYNRALLRYETGDYQGSVHDFDVVLRQYPNFVAGYYSRAEVKRKMHDEVGA 348

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIG------------------------------- 531
             D      ++++ K+         S  G                               
Sbjct: 349 DRDYWTAYNMEQKKKNGNASGNAVASQNGNNTGTQSTDPASKDENTREQSDKNIDKFNRL 408

Query: 532 ------EYKKAE-EAHLKAIQLDRNF---LEAWGHLTQF-----YQDLANSEKALECLQQ 576
                 E +K +  + ++    DRN    LE    LT +      + L   +K +E    
Sbjct: 409 VVYDEEEVRKTKYNSEIRGRVQDRNVRVDLEPMFVLTYYEKVDPVKKLVYYDKMVEAYNS 468

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L ++++         L    +  H  +I + S+ +  +P++++  + RA  +  + ++ 
Sbjct: 469 RLVLERKLRVTNEEAALTEDQVAVHFASIDNFSARIVKNPNDVDAYFGRALDFMLVQDFT 528

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           EAIKDY   ++L+ D         +A++ + +  Y
Sbjct: 529 EAIKDYTKVIELDPDF-------AMAYFNRAVVRY 556


>gi|330506551|ref|YP_004382979.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328927359|gb|AEB67161.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 261

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 111/220 (50%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG    ++G Y  AI  +D+ L+ DP  P A   +GTA   QR  E AI  F E I+ 
Sbjct: 28  LERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQAFDEVIRI 87

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    AW  +G A   LGE  EAI  L +A+  EP +  I   +G   +   +++ A+ 
Sbjct: 88  DPELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQGEYDEALT 147

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            +   ++L+ ++  A++     L   G+Y++A  A  + I+L  ++  AW +  +    L
Sbjct: 148 AIEEAIRLEPDSTIAWSLKADILYEQGDYQEAITAVDEVIRLMPDYPAAWSNRGELLWRL 207

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
              +++LE L + + +D   + A++ RG  L   G+ ++A
Sbjct: 208 ERYDESLEALDRAIQLDSDLADAWYNRGEALKAQGRDEEA 247



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 80/153 (52%)

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
           +EN   +   G  L S G+Y++A EA+ +A++LD     AW +      +    E+A++ 
Sbjct: 21  QENAEEWLERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQA 80

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             +V+ ID   + A+  +G  LH LG++ +AI  L   +G++P N     L+ S  +  G
Sbjct: 81  FDEVIRIDPELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQG 140

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           EY EA+   + A+ LE DS   + L+    Y++
Sbjct: 141 EYDEALTAIEEAIRLEPDSTIAWSLKADILYEQ 173



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 105/233 (45%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E  + RG     Q + E AI  + EA++ +P    AW  +G A        EAIQ   + 
Sbjct: 25  EEWLERGNELFSQGDYEEAIEAYDEALRLDPENPVAWSNKGTALINQRRYEEAIQAFDEV 84

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           +  +P  A     +G    +  +++ A+  L   + L+ EN S ++  G AL   GEY +
Sbjct: 85  IRIDPELASAWSYKGGALHELGEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQGEYDE 144

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A  A  +AI+L+ +   AW        +  + ++A+  + +V+ +   +  A+  RG LL
Sbjct: 145 ALTAIEEAIRLEPDSTIAWSLKADILYEQGDYQEAITAVDEVIRLMPDYPAAWSNRGELL 204

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             L ++ ++++ L   + +D    +  Y R     A G   EA   Y  A +L
Sbjct: 205 WRLERYDESLEALDRAIQLDSDLADAWYNRGEALKAQGRDEEADVAYTRAKEL 257



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 74/152 (48%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  AI   DQ +  +P        +G+A  FQ E + A++   EAI+  P +  AW  
Sbjct: 106 GEYDEAIVALDQAIGLEPENGSIWSLKGSALYFQGEYDEALTAIEEAIRLEPDSTIAWSL 165

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +       G+  EAI  + + +   P+       RG + ++ + ++ ++E L   ++LD 
Sbjct: 166 KADILYEQGDYQEAITAVDEVIRLMPDYPAAWSNRGELLWRLERYDESLEALDRAIQLDS 225

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +   A+   G AL + G  ++A+ A+ +A +L
Sbjct: 226 DLADAWYNRGEALKAQGRDEEADVAYTRAKEL 257


>gi|414076244|ref|YP_006995562.1| TPR repeat-containing proptein [Anabaena sp. 90]
 gi|413969660|gb|AFW93749.1| TPR repeat-containing proptein [Anabaena sp. 90]
          Length = 972

 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 120/270 (44%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ Q   G   +A++++++  +  P   E    +G    + +    AI+ + + +   P 
Sbjct: 313 GLRQAKAGDLLNALALYERASQIQPHVYEYWFNQGLVLFYLQRFSEAIAAYDQTLALKPD 372

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             + W  RG     LG+   AI    +A+  +P+       RG+   K      A++   
Sbjct: 373 FYQVWYSRGSILGELGDFDAAIASFDQAIAIKPDYQAAWSSRGLALLKLGLIGEAIDSYD 432

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             V L+ ++  A+ Y G+AL+ + +Y +A  ++ +A+ L  N+ E W        +L   
Sbjct: 433 QAVNLEPQDSEAWYYRGIALAVVEQYAEAIASYDQALNLQPNYHEVWIDRGVVLFNLKQW 492

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
            +A+E   Q L I   F  A++ RG+    LG+ + AI      + I P      Y +A 
Sbjct: 493 LEAIESWDQALAIQPEFYLAWYNRGVSFEHLGRREDAISSYQQAIAIKPDFHPAWYNQAV 552

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFV 657
               +    +AI  YD AL+++LD  E ++
Sbjct: 553 ALFYLDRSAQAISGYDRALEIKLDYWEAWL 582



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 19/300 (6%)

Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
           QI+  +P   E+L   G  +A   +L  A++ +  A Q  P   E W  +G     L   
Sbjct: 299 QIVVTNPA--ESLFYEGLRQAKAGDLLNALALYERASQIQPHVYEYWFNQGLVLFYLQRF 356

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
            EAI    + L  +P+   + + RG +  +  DF+AA+      + +  + ++A++  GL
Sbjct: 357 SEAIAAYDQTLALKPDFYQVWYSRGSILGELGDFDAAIASFDQAIAIKPDYQAAWSSRGL 416

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA-----NSEKALECLQQVLYI 580
           AL  +G   +A +++ +A+ L+    EAW     +Y+ +A        +A+    Q L +
Sbjct: 417 ALLKLGLIGEAIDSYDQAVNLEPQDSEAW-----YYRGIALAVVEQYAEAIASYDQALNL 471

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
              + + +  RG++L  L Q  +AI+     L I P      Y R   +  +G   +AI 
Sbjct: 472 QPNYHEVWIDRGVVLFNLKQWLEAIESWDQALAIQPEFYLAWYNRGVSFEHLGRREDAIS 531

Query: 641 DYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            Y  A+ ++ D          A+Y + +AL+   +       +D   +I   + E W  R
Sbjct: 532 SYQQAIAIKPDFHP-------AWYNQAVALFYLDRSAQAISGYDRALEIKLDYWEAWLGR 584



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 4/234 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG      G + +AI+ FDQ +   P Y  A   RG A      +  AI  + +A+   
Sbjct: 379 SRGSILGELGDFDAAIASFDQAIAIKPDYQAAWSSRGLALLKLGLIGEAIDSYDQAVNLE 438

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A A + +  EAI    +AL  +PN  ++  +RG+V F  K +  A+E 
Sbjct: 439 PQDSEAWYYRGIALAVVEQYAEAIASYDQALNLQPNYHEVWIDRGVVLFNLKQWLEAIES 498

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
               + +  E   A+   G++   +G  + A  ++ +AI +  +F  AW +  +  FY D
Sbjct: 499 WDQALAIQPEFYLAWYNRGVSFEHLGRREDAISSYQQAIAIKPDFHPAWYNQAVALFYLD 558

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              S +A+    + L I   + +A+  RG     L  H+ ++  +S+    +P+
Sbjct: 559 --RSAQAISGYDRALEIKLDYWEAWLGRGAAAGHLTPHQSSLIVVSNISASNPA 610


>gi|27379691|ref|NP_771220.1| hypothetical protein blr4580 [Bradyrhizobium japonicum USDA 110]
 gi|27352843|dbj|BAC49845.1| blr4580 [Bradyrhizobium japonicum USDA 110]
          Length = 389

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 106/220 (48%)

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +Q+NPS   A   RG+     G++  A+ DL++A++ +PN A   + RGI      D + 
Sbjct: 67  LQANPSNALALANRGEIFRRKGDAERALADLNRAIDLDPNDAIAWYNRGIAYDDLGDRDH 126

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++L   +   Y   G +     +Y +A   + +AI+LDR F  A+ +    Y
Sbjct: 127 AIADYTRAIRLKPNDALYYNNRGNSYIGKNDYARALADYDQAIKLDRTFALAYFNRGTAY 186

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           ++   +++AL  L   + +D  +  AY  R  +    G+  +A+ D    L + P+N   
Sbjct: 187 REHGEADRALADLDMAIKLDPNYGPAYGNRARIFRDKGERARALADFGKSLQLTPNNDRD 246

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
            Y RAS Y    +Y  A++DYD A+         F  +C+
Sbjct: 247 AYARASMYFDDHDYARALEDYDRAIKANASYAGVFNARCM 286



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 121/282 (42%), Gaps = 36/282 (12%)

Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
           +L+ +P    AL  RG     + + E A++D   AI  +P+   AW  RG A   LG+  
Sbjct: 66  VLQANPSNALALANRGEIFRRKGDAERALADLNRAIDLDPNDAIAWYNRGIAYDDLGDRD 125

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
            AI D ++A+  +PN A   + RG       D+  A+ D    +KLD+    AY   G A
Sbjct: 126 HAIADYTRAIRLKPNDALYYNNRGNSYIGKNDYARALADYDQAIKLDRTFALAYFNRGTA 185

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD-------LANSEK---------- 569
               GE  +A      AI+LD N+  A+G+  + ++D       LA+  K          
Sbjct: 186 YREHGEADRALADLDMAIKLDPNYGPAYGNRARIFRDKGERARALADFGKSLQLTPNNDR 245

Query: 570 -----------------ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
                            ALE   + +  +  ++  ++ R +    LGQ ++A+ D    L
Sbjct: 246 DAYARASMYFDDHDYARALEDYDRAIKANASYAGVFNARCMTRAILGQLQEALADCEQSL 305

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL--ELDS 652
            + P +   L  RA  Y  +G    AI DYD AL    ELDS
Sbjct: 306 RMRPGDPYTLDSRALTYLKLGNLDAAIADYDTALSAKPELDS 347



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 109/248 (43%), Gaps = 6/248 (2%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           TR  + K     +  +RG + + +  YA A++ +DQ +K D  +  A   RGTA     E
Sbjct: 132 TRAIRLKPNDALYYNNRGNSYIGKNDYARALADYDQAIKLDRTFALAYFNRGTAYREHGE 191

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + A++D   AI+ +P+ G A+  R +     GE   A+ D  K+L+  PN+    + R 
Sbjct: 192 ADRALADLDMAIKLDPNYGPAYGNRARIFRDKGERARALADFGKSLQLTPNNDRDAYARA 251

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE---EAHLKAIQLD 547
            + F   D+  A+ED    +K +      +    +  + +G+ ++A    E  L+    D
Sbjct: 252 SMYFDDHDYARALEDYDRAIKANASYAGVFNARCMTRAILGQLQEALADCEQSLRMRPGD 311

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
              L++   LT  Y  L N + A+      L        A + RGL     G    A +D
Sbjct: 312 PYTLDSRA-LT--YLKLGNLDAAIADYDTALSAKPELDSALYGRGLAKRRTGDADGAERD 368

Query: 608 LSSGLGID 615
           +++   ++
Sbjct: 369 IAAARAVN 376



 Score = 39.7 bits (91), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 61/143 (42%)

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           SA ++ +  N  A    G      G+ ++A     +AI LD N   AW +    Y DL +
Sbjct: 64  SAVLQANPSNALALANRGEIFRRKGDAERALADLNRAIDLDPNDAIAWYNRGIAYDDLGD 123

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + A+    + + +    +  Y+ RG    G   + +A+ D    + +D +     + R 
Sbjct: 124 RDHAIADYTRAIRLKPNDALYYNNRGNSYIGKNDYARALADYDQAIKLDRTFALAYFNRG 183

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
           + Y   GE   A+ D D A+ L+
Sbjct: 184 TAYREHGEADRALADLDMAIKLD 206


>gi|354565710|ref|ZP_08984884.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353548583|gb|EHC18028.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 846

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 136/292 (46%), Gaps = 7/292 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF-QRELEAAISDFTEAIQS 444
           +R +A    G Y  A+  +DQ L   P   +A   RG A  F  R+ EA IS + +A+  
Sbjct: 452 NRSLALHLSGCYEEAVDSYDQALAIKPDLDQAWYNRGIALYFLGRDQEAVIS-YDKALAI 510

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   +A+  R QA   LG   EA+    + L  +P+     + +G   +  K ++ AV 
Sbjct: 511 KPDYHQAYYSRCQALENLGRYEEAVASYEQVLALKPDHYQAWYHKGNALYALKHYDEAVT 570

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                + L  +   A+    + L  +G Y++   +  K ++      +AW ++      L
Sbjct: 571 SYDQALALKPDYYQAWYNGSVVLYLLGLYEEVVRSCEKVVEFKPEHYQAWYNMGNALYFL 630

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + E+A+    +VL I   + +A++ R + L+ LG +++ +      + I P + +  Y 
Sbjct: 631 GHYEEAVAAYDKVLLIKPDYDQAWYNRSIALYPLGFYQEVVASCDKAVAIAPDHYKAWYN 690

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
           R +  +++G+Y+EA+  YD AL ++ D  E +     V+  L  Y++ +  Y
Sbjct: 691 RGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNRGVVMANLGDYKEAVVCY 742



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 130/289 (44%), Gaps = 3/289 (1%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            V    K+ +I  D+     SR  A  N G+Y  A++ ++Q+L   P + +A   +G A 
Sbjct: 500 AVISYDKALAIKPDYHQAYYSRCQALENLGRYEEAVASYEQVLALKPDHYQAWYHKGNAL 559

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
              +  + A++ + +A+   P   +AW         LG   E ++   K +EF+P     
Sbjct: 560 YALKHYDEAVTSYDQALALKPDYYQAWYNGSVVLYLLGLYEEVVRSCEKVVEFKPEHYQA 619

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            +  G   +    +  AV      + +  +   A+    +AL  +G Y++   +  KA+ 
Sbjct: 620 WYNMGNALYFLGHYEEAVAAYDKVLLIKPDYDQAWYNRSIALYPLGFYQEVVASCDKAVA 679

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +  +  +AW +       L   ++AL    + L I   + +A++ RG+++  LG +K+A+
Sbjct: 680 IAPDHYKAWYNRGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNRGVVMANLGDYKEAV 739

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
                 L I P N +  Y R +  + +G Y+EA+   + A+ L  DS E
Sbjct: 740 VCYDKVLAIHPHNYQAWYSRGNALNKLGSYQEALISLNKAIALSPDSFE 788



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 118/261 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA    G+   A+  +D+ L   P Y +A   R  A       E A++ + + +   
Sbjct: 486 NRGIALYFLGRDQEAVISYDKALAIKPDYHQAYYSRCQALENLGRYEEAVASYEQVLALK 545

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  +G A  AL    EA+    +AL  +P+     +   +V +    +   V  
Sbjct: 546 PDHYQAWYHKGNALYALKHYDEAVTSYDQALALKPDYYQAWYNGSVVLYLLGLYEEVVRS 605

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               V+   E+  A+  +G AL  +G Y++A  A+ K + +  ++ +AW + +     L 
Sbjct: 606 CEKVVEFKPEHYQAWYNMGNALYFLGHYEEAVAAYDKVLLIKPDYDQAWYNRSIALYPLG 665

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++ +    + + I     KA++ RG  L+ LG++K+A+      L I P   E  Y R
Sbjct: 666 FYQEVVASCDKAVAIAPDHYKAWYNRGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNR 725

Query: 626 ASCYHAIGEYREAIKDYDAAL 646
                 +G+Y+EA+  YD  L
Sbjct: 726 GVVMANLGDYKEAVVCYDKVL 746



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 106/233 (45%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A++ +DQ L   P Y +A              E  +    + ++  P   +AW   G
Sbjct: 565 YDEAVTSYDQALALKPDYYQAWYNGSVVLYLLGLYEEVVRSCEKVVEFKPEHYQAWYNMG 624

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            A   LG   EA+    K L  +P+     + R I  +    +   V      V +  ++
Sbjct: 625 NALYFLGHYEEAVAAYDKVLLIKPDYDQAWYNRSIALYPLGFYQEVVASCDKAVAIAPDH 684

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A+   G  L S+G+YK+A  ++ KA+ +  ++ EAW +      +L + ++A+ C  +
Sbjct: 685 YKAWYNRGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNRGVVMANLGDYKEAVVCYDK 744

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           VL I     +A++ RG  L+ LG +++A+  L+  + + P + E  Y +A CY
Sbjct: 745 VLAIHPHNYQAWYSRGNALNKLGSYQEALISLNKAIALSPDSFEAHYNKACCY 797



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 138/328 (42%), Gaps = 8/328 (2%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           ++ ++ IS D    RGIA      Y  A++ +D+ L       +    R  A       E
Sbjct: 406 LTFNREIS-DIWFYRGIALYLLANYEEAVTSYDKALALKSDSYQGWYNRSLALHLSGCYE 464

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            A+  + +A+   P   +AW  RG A   LG   EA+    KAL  +P+     + R   
Sbjct: 465 EAVDSYDQALAIKPDLDQAWYNRGIALYFLGRDQEAVISYDKALAIKPDYHQAYYSRCQA 524

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
                 +  AV      + L  ++  A+ + G AL ++  Y +A  ++ +A+ L  ++ +
Sbjct: 525 LENLGRYEEAVASYEQVLALKPDHYQAWYHKGNALYALKHYDEAVTSYDQALALKPDYYQ 584

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           AW + +     L   E+ +   ++V+       +A++  G  L+ LG +++A+      L
Sbjct: 585 AWYNGSVVLYLLGLYEEVVRSCEKVVEFKPEHYQAWYNMGNALYFLGHYEEAVAAYDKVL 644

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYT 672
            I P   +  Y R+   + +G Y+E +   D A+ +  D  +       A+Y +   LY+
Sbjct: 645 LIKPDYDQAWYNRSIALYPLGFYQEVVASCDKAVAIAPDHYK-------AWYNRGNGLYS 697

Query: 673 ASKINSEFCWFDIDGDIDPLFKEYWCKR 700
             K       +D    I P + E W  R
Sbjct: 698 LGKYKEALASYDKALTIKPDYYEAWYNR 725



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 85/184 (46%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  A++ +D++L   P Y +A   R  A       +  ++   +A+   P   +AW  
Sbjct: 631 GHYEEAVAAYDKVLLIKPDYDQAWYNRSIALYPLGFYQEVVASCDKAVAIAPDHYKAWYN 690

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG    +LG+  EA+    KAL  +P+  +  + RG+V     D+  AV      + +  
Sbjct: 691 RGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNRGVVMANLGDYKEAVVCYDKVLAIHP 750

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            N  A+   G AL+ +G Y++A  +  KAI L  +  EA  +    Y    N E ALE L
Sbjct: 751 HNYQAWYSRGNALNKLGSYQEALISLNKAIALSPDSFEAHYNKACCYALQQNLELALESL 810

Query: 575 QQVL 578
           Q+ +
Sbjct: 811 QRAI 814



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 62/130 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    + GKY  A++ +D+ L   P Y EA   RG   A   + + A+  + + +  +
Sbjct: 690 NRGNGLYSLGKYKEALASYDKALTIKPDYYEAWYNRGVVMANLGDYKEAVVCYDKVLAIH 749

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   LG   EA+  L+KA+   P+S +  + +       ++   A+E 
Sbjct: 750 PHNYQAWYSRGNALNKLGSYQEALISLNKAIALSPDSFEAHYNKACCYALQQNLELALES 809

Query: 506 LSACVKLDKE 515
           L   + L+ E
Sbjct: 810 LQRAISLNPE 819


>gi|284038657|ref|YP_003388587.1| hypothetical protein Slin_3793 [Spirosoma linguale DSM 74]
 gi|283817950|gb|ADB39788.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
          Length = 428

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 145/314 (46%), Gaps = 20/314 (6%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI++    +Y  A++ F + ++ +P+   A   R   +    +   +I DFT+ I+ +
Sbjct: 116 NRGISRSRLDQYQGALTDFSKAIELEPVNAYAYYARAVTKQKLNDFAGSILDFTKVIEIS 175

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG ++  L +   AI DL+KA+E  P  ++    RG    K  D+  A+ D
Sbjct: 176 PKRAQAYAGRGTSKVELNDFTGAITDLNKAIELSPQDSESYFHRGYAKGKLDDYKGALPD 235

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----GHLTQFY 561
               + L  ++  AY   G   S +G+ K A +   +AI+++  ++E      G ++   
Sbjct: 236 YERALALKPDHYRAYYGRGFCRSKLGDQKGAVQDFNQAIEVNNVYVETKVVYNGRISHAI 295

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            D  N    ++   ++  +    ++AY  RG+  H  G  K AI DL+  + ++P+  E 
Sbjct: 296 LD--NLRNVVQERDKINELGSERAEAYFSRGVSKHRQGDSKAAIIDLTKAIELNPAYAEA 353

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ-------------CLAFYQK-E 667
            +       A G+ + A+ D ++A+ L+    E F ++             CL   +  E
Sbjct: 354 YFTLGLIKSAQGDQKGALTDCNSAIKLKPGYAEVFYVRGLIKHSLGDENGGCLDLSKAGE 413

Query: 668 IALYTASKINSEFC 681
           +    A K+ SE+C
Sbjct: 414 LGYTPAYKVISEYC 427



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 115/236 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+     +  AI  +D+ ++ +     A + RG +++ Q +   AI DF  +I+ N
Sbjct: 48  NRGLAKATLKDHRGAILDYDKAIELNSKDALAYLSRGVSKSRQEDHRGAILDFGRSIELN 107

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P A +A+  RG +R+ L +   A+ D SKA+E EP +A   + R +   K  DF  ++ D
Sbjct: 108 PDAPQAYYNRGISRSRLDQYQGALTDFSKAIELEPVNAYAYYARAVTKQKLNDFAGSILD 167

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +++  +   AY   G +   + ++  A     KAI+L     E++ H       L 
Sbjct: 168 FTKVIEISPKRAQAYAGRGTSKVELNDFTGAITDLNKAIELSPQDSESYFHRGYAKGKLD 227

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           + + AL   ++ L +     +AY+ RG     LG  K A++D +  + ++   +E 
Sbjct: 228 DYKGALPDYERALALKPDHYRAYYGRGFCRSKLGDQKGAVQDFNQAIEVNNVYVET 283



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 21/201 (10%)

Query: 327 SYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS 386
            Y+K  + D K +     R+ L+ K D  +     A   + FC +++   K    DF  +
Sbjct: 220 GYAKGKLDDYKGALPDYERA-LALKPDHYR-----AYYGRGFCRSKLGDQKGAVQDFNQA 273

Query: 387 RGIAQVN-------EGKYASAI--SIFDQILKEDPM------YPEALIGRGTARAFQREL 431
             +  V         G+ + AI  ++ + + + D +        EA   RG ++  Q + 
Sbjct: 274 IEVNNVYVETKVVYNGRISHAILDNLRNVVQERDKINELGSERAEAYFSRGVSKHRQGDS 333

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           +AAI D T+AI+ NP+  EA+   G  ++A G+   A+ D + A++ +P  A++ + RG+
Sbjct: 334 KAAIIDLTKAIELNPAYAEAYFTLGLIKSAQGDQKGALTDCNSAIKLKPGYAEVFYVRGL 393

Query: 492 VNFKFKDFNAAVEDLSACVKL 512
           +     D N    DLS   +L
Sbjct: 394 IKHSLGDENGGCLDLSKAGEL 414



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 91/235 (38%), Gaps = 34/235 (14%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G  R+   +   A+  F+ AI  NP    ++  RG A+A L +   AI D  KA+E    
Sbjct: 16  GVNRSKSSDFTGALQAFSMAITMNPENAPSYYNRGLAKATLKDHRGAILDYDKAIELNSK 75

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A     RG+   + +D   A+ D    ++L+ +   AY   G++ S + +Y+       
Sbjct: 76  DALAYLSRGVSKSRQEDHRGAILDFGRSIELNPDAPQAYYNRGISRSRLDQYQ------- 128

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
                        G LT F        KA+E      Y       AY+ R +    L   
Sbjct: 129 -------------GALTDF-------SKAIELEPVNAY-------AYYARAVTKQKLNDF 161

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             +I D +  + I P   +    R +    + ++  AI D + A++L     E +
Sbjct: 162 AGSILDFTKVIEISPKRAQAYAGRGTSKVELNDFTGAITDLNKAIELSPQDSESY 216


>gi|225619900|ref|YP_002721157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214719|gb|ACN83453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 660

 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 3/265 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA-IQS 444
           SRG+++ N G Y  AI  F++ L+ DP + +A   R  + A       AI DF +  I+ 
Sbjct: 110 SRGVSKYNLGLYEEAIKDFNKTLELDPDFKDAYFIRALSYAKINSHNEAIDDFNKLLIEY 169

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  RG ++  L    EAI+D + AL+  PN + I ++R +       F  A+ 
Sbjct: 170 DEINYIYYYYRGLSKFNLNLFEEAIKDFTIALDDLPNESYIYYDRALAYSNLNMFENAIN 229

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++L+K +  +Y    L  S + EY KA E + K ++L+ N  EA  ++    Q+L
Sbjct: 230 DYNRVIELNKNDIDSYYNRALTYSKLEEYDKAIEDYNKVLELNPNDKEAVYNMALCKQNL 289

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+A++    ++  D  F   Y+  G+    L ++++AI +  + + ++P   +  + 
Sbjct: 290 ELFEEAIKDFNNIIDSDNIF--VYYSLGICYLELERYEEAIDNFDAFIKLNPDYPDAYFY 347

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           R +  + +  Y EAI DY+  L+L+
Sbjct: 348 RGNAKYDLKHYEEAIDDYNKTLELD 372



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 134/283 (47%), Gaps = 7/283 (2%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            I    +I +    + G ++ N   Y  ++  FD+ L+ +  Y  A   RG ++      
Sbjct: 62  EIDNMHNILISAYYNIGTSKCNLKMYEESLKYFDKTLELNDKYGNAYHSRGVSKYNLGLY 121

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL-EFEPNSADILHERG 490
           E AI DF + ++ +P   +A+  R  + A +    EAI D +K L E++  +    + RG
Sbjct: 122 EEAIKDFNKTLELDPDFKDAYFIRALSYAKINSHNEAIDDFNKLLIEYDEINYIYYYYRG 181

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDR 548
           +  F    F  A++D +  + LD     +Y Y    LA S++  ++ A   + + I+L++
Sbjct: 182 LSKFNLNLFEEAIKDFT--IALDDLPNESYIYYDRALAYSNLNMFENAINDYNRVIELNK 239

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N ++++ +    Y  L   +KA+E   +VL ++    +A +   L    L   ++AIKD 
Sbjct: 240 NDIDSYYNRALTYSKLEEYDKAIEDYNKVLELNPNDKEAVYNMALCKQNLELFEEAIKDF 299

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           ++   ID  NI   Y    CY  +  Y EAI ++DA + L  D
Sbjct: 300 NN--IIDSDNIFVYYSLGICYLELERYEEAIDNFDAFIKLNPD 340



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 65/127 (51%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           R  A+     ++ +I D+ +AI   P   E +  +G A   L    EAI+D  KA+E  P
Sbjct: 450 RAIAKHNAGLVKESIDDYNKAIDLEPDNYEIYSYKGNAELDLCLYEEAIKDFDKAIELNP 509

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N  +  + RGI N   K++  + +D    VKL++++  A+  LG     + EY KA E  
Sbjct: 510 NFDEAYYNRGIANDALKNYEESFKDYKMTVKLNEQHDYAFNNLGSYYVRLKEYDKALENF 569

Query: 541 LKAIQLD 547
            KA++++
Sbjct: 570 YKALEIN 576



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 16/222 (7%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD- 437
           + +D    R + ++N   Y  AI  FD+ L          I   + RA+   L+A + + 
Sbjct: 374 LYIDAYYERAMVKINLNLYDDAIKDFDEALYN--------IDSDSDRAYLFYLKAIVYEI 425

Query: 438 ---FTEAIQSNPSAGEA----WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
              + EAI++  +A E     + +R  A+   G   E+I D +KA++ EP++ +I   +G
Sbjct: 426 LKKYDEAIENYTNAIELGNDCYYKRAIAKHNAGLVKESIDDYNKAIDLEPDNYEIYSYKG 485

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
                   +  A++D    ++L+     AY   G+A  ++  Y+++ + +   ++L+   
Sbjct: 486 NAELDLCLYEEAIKDFDKAIELNPNFDEAYYNRGIANDALKNYEESFKDYKMTVKLNEQH 545

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
             A+ +L  +Y  L   +KALE   + L I+   S  Y+  G
Sbjct: 546 DYAFNNLGSYYVRLKEYDKALENFYKALEINSELSLPYNNIG 587



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 1/86 (1%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E++L+   + L ++ ++  AYH RG+  + LG +++AIKD +  L +DP   +  ++RA 
Sbjct: 88  EESLKYFDKTLELNDKYGNAYHSRGVSKYNLGLYEEAIKDFNKTLELDPDFKDAYFIRAL 147

Query: 628 CYHAIGEYREAIKDYDAALDLELDSM 653
            Y  I  + EAI D++  L +E D +
Sbjct: 148 SYAKINSHNEAIDDFNKLL-IEYDEI 172



 Score = 40.0 bits (92), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 26/169 (15%)

Query: 47  CSLRNWSKAIRILDSLLAQSYEIQDICNRAF-----CYSQLELHKHVIRDCDKALQLDPT 101
           C+L+ + ++++  D  L    E+ D    A+         L L++  I+D +K L+LDP 
Sbjct: 82  CNLKMYEESLKYFDKTL----ELNDKYGNAYHSRGVSKYNLGLYEEAIKDFNKTLELDPD 137

Query: 102 LLQAYILKGCAFSALGRKEEALSVWEK--------GYEHALHQSA---DLKQFLELEELL 150
              AY ++  +++ +    EA+  + K         Y +  ++     +L  F E  +  
Sbjct: 138 FKDAYFIRALSYAKINSHNEAIDDFNKLLIEYDEINYIYYYYRGLSKFNLNLFEEAIKDF 197

Query: 151 TAAKQD--RSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDI 197
           T A  D        YD + + S+L + E+ +N  +++ E     NK+DI
Sbjct: 198 TIALDDLPNESYIYYDRALAYSNLNMFENAINDYNRVIEL----NKNDI 242


>gi|301310686|ref|ZP_07216625.1| TPR domain protein [Bacteroides sp. 20_3]
 gi|423336937|ref|ZP_17314684.1| hypothetical protein HMPREF1059_00636 [Parabacteroides distasonis
           CL09T03C24]
 gi|300832260|gb|EFK62891.1| TPR domain protein [Bacteroides sp. 20_3]
 gi|409239956|gb|EKN32739.1| hypothetical protein HMPREF1059_00636 [Parabacteroides distasonis
           CL09T03C24]
          Length = 707

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 128/289 (44%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           IS    I+ D  L+ G   +    Y  +I  F+Q++K  P   E    R  A+    + +
Sbjct: 15  ISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFK 74

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            A  D T  +Q NP   +A+  RG AR +  +  EAI D  K LEF+P    +L    + 
Sbjct: 75  GAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVA 134

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             + KD+N A +     +    +    Y   G      G+  KA   + KAI++D  +  
Sbjct: 135 FIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAP 194

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A+G+    +  + + + AL  L + L +D R S  Y  RGL+ + +   + A+ D    +
Sbjct: 195 AYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVI 254

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
            +D  N+   + R      +G+   AI+D+D  +  E D+   +  + L
Sbjct: 255 SMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRAL 303



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +D ++K +P +  A   R   R  QR+  AAI D+ EAI+ +P   EA+  RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677

Query: 464 ESVEAIQDLSKALEF 478
           +    I DLSKA E 
Sbjct: 678 DVNRGIADLSKAGEL 692



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 76/170 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG   + +G    A++ +++ ++ DP Y  A   R        + + A++D  EA++ 
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  RG  R  + +   A+ D  + +  +  +      RG++ F+  D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    ++ + +N  AY    L     G+Y+ A + +   ++    FL  +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E E  + D+   I+ NP    A+  R   R A  +   AI D ++A+E +P  A+  + R
Sbjct: 610 EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNR 669

Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
           G+      D N  + DLS   +L
Sbjct: 670 GLARLSQGDVNRGIADLSKAGEL 692



 Score = 40.0 bits (92), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 10/274 (3%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R +RG+ +   G    AI  FD +++++P    A   R   R    +   A+ D+   ++
Sbjct: 264 RFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLK 323

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA-A 502
             P+    +  R +A+  LG++V A +D   A++ E  + +    +   +      N  A
Sbjct: 324 QYPTFLPGFVSRSEAKRKLGDNVGADRDYWAAIKMEEQAKNGQLPKTSSSGSNTAVNGDA 383

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE-EAHLKAIQLDRNF---LEAWGHLT 558
             D S     ++ +K+   +  L +    + +K++ ++ ++    DRN    LE    LT
Sbjct: 384 KTDDSEENTREQSDKNINKFNRLVVYDKEQERKSKYQSEVRGRVQDRNVHVDLEPQFVLT 443

Query: 559 QF-----YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
            +      + L   +K +E     + + ++         L    +  H  +I + S+ + 
Sbjct: 444 YYEKADPVKKLVYYDKMVEDYNGQMVLKRKLRITNEEAALTEDQIAVHFASIDEYSAEIE 503

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            DP+N    + RA  +  + ++ EAIK++  A++
Sbjct: 504 RDPNNANAYFGRAMDFMLVQDFSEAIKNFSEAIE 537


>gi|296127341|ref|YP_003634593.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296019157|gb|ADG72394.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 750

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 152/313 (48%), Gaps = 23/313 (7%)

Query: 363 KRNKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
           KRN +  +   +K+  ++    ++    G++      Y  AI  +++ L+ +  Y  A I
Sbjct: 361 KRNYEEAIKNFNKALELNTSMDMAYYNIGLSYYEMHDYEKAIEYYNKALEINTQYSAAYI 420

Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
             G         + AI+ +  A++ NP+   ++     A  +L +  +A++D + ALE  
Sbjct: 421 NLGLIEHNFGNYQEAINYYKRALEINPNYSLSYYNIALAEMSLEDYDKALEDFNHALELG 480

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
            N ADI    G++  +   ++ A+E  +  ++++    +AY  +   LS++ +YK+A E 
Sbjct: 481 YNEADIYTNIGLIYSREAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYKEALEI 540

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQD------LANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           + K I++        G+   +Y+       ++  E+A+     ++ ++ +   AY+ RG 
Sbjct: 541 YDKVIRM------YPGNFDVYYERGYTKYRVSKYEEAIRDFDIIINVNSKHYNAYYYRGC 594

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE---- 649
               L  + +AIKD    +  +P+N +    +ASCY  + +YRE+I++YD A++L     
Sbjct: 595 SKKYLKNYDEAIKDFDKAIEYNPNNPDYYSEKASCYDYLNKYRESIENYDKAIELNDNDW 654

Query: 650 ----LDSMEKFVL 658
               L + EKF+L
Sbjct: 655 FLYILRAKEKFLL 667



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 118/260 (45%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+    +  Y  AI  F++ L+ +     A    G +     + E AI  + +A++ N  
Sbjct: 355 GLVYHYKRNYEEAIKNFNKALELNTSMDMAYYNIGLSYYEMHDYEKAIEYYNKALEINTQ 414

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+   G      G   EAI    +ALE  PN +   +   +     +D++ A+ED +
Sbjct: 415 YSAAYINLGLIEHNFGNYQEAINYYKRALEINPNYSLSYYNIALAEMSLEDYDKALEDFN 474

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L       YT +GL  S    Y KA E + K ++++ N + A+ ++     ++   
Sbjct: 475 HALELGYNEADIYTNIGLIYSREAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKY 534

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++ALE   +V+ +       Y+ RG   + + ++++AI+D    + ++  +    Y R  
Sbjct: 535 KEALEIYDKVIRMYPGNFDVYYERGYTKYRVSKYEEAIRDFDIIINVNSKHYNAYYYRGC 594

Query: 628 CYHAIGEYREAIKDYDAALD 647
               +  Y EAIKD+D A++
Sbjct: 595 SKKYLKNYDEAIKDFDKAIE 614



 Score = 79.0 bits (193), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 109/227 (48%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G    ++R  E AI +F +A++ N S   A+   G +   + +  +AI+  +KALE    
Sbjct: 355 GLVYHYKRNYEEAIKNFNKALELNTSMDMAYYNIGLSYYEMHDYEKAIEYYNKALEINTQ 414

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            +      G++   F ++  A+      ++++     +Y  + LA  S+ +Y KA E   
Sbjct: 415 YSAAYINLGLIEHNFGNYQEAINYYKRALEINPNYSLSYYNIALAEMSLEDYDKALEDFN 474

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
            A++L  N  + + ++   Y   A  +KA+E   +VL I+     AY+     L  + ++
Sbjct: 475 HALELGYNEADIYTNIGLIYSREAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKY 534

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           K+A++     + + P N +  Y R    + + +Y EAI+D+D  +++
Sbjct: 535 KEALEIYDKVIRMYPGNFDVYYERGYTKYRVSKYEEAIRDFDIIINV 581



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 16/299 (5%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S D   +RG+A++N   Y  AI  FD+ ++       +   RG A+ +    + AI DF 
Sbjct: 41  SYDLYHNRGLAKLNLRLYEGAIKDFDRAIELGDY--NSYYERGLAKFYMAFYKEAIEDFN 98

Query: 440 EAIQSNPS--AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + ++ + S  A  A+   G  +  L E  EA++  +KA+E  PN     H   ++     
Sbjct: 99  KVVELDKSSAASFAYNTIGLCKYNLNEFDEALKYYNKAIETNPNLIIAYHNIALLKHSMG 158

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
             + A+  L+  +++D  N   Y  +      +G  ++A E   K +++  + L  +  +
Sbjct: 159 LDDEALSYLNKALEIDTNNIETYLKIYSIKLGLGLEREANEYLDKIMEMYPDDLYIYDRI 218

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                D    E++LE L++ L I+  F  AY+     LH L  + +A+  L   L I P+
Sbjct: 219 GNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLNLNDEALSYLEKALQISPN 278

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALD-----LELDSMEKFVLQCLAFYQKEIALY 671
           N       A  Y  I   + A+ DYD AL      LE+D  +  +   +A  + E+ LY
Sbjct: 279 N-------ADTYFKIFLIKRALGDYDGALSCLEKILEIDDTDVAIYNEIALIKIELELY 330



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 128/261 (49%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G  +++ G    ++    + L+ +P + +A      A       + A+S   +A+Q +P+
Sbjct: 219 GNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLNLNDEALSYLEKALQISPN 278

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             + + +    + ALG+   A+  L K LE +     I +E  ++  + + +  A+  L+
Sbjct: 279 NADTYFKIFLIKRALGDYDGALSCLEKILEIDDTDVAIYNEIALIKIELELYEEALYYLN 338

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + +D  N   Y  +GL       Y++A +   KA++L+ +   A+ ++   Y ++ + 
Sbjct: 339 KALCIDNNNAEIYNTIGLVYHYKRNYEEAIKNFNKALELNTSMDMAYYNIGLSYYEMHDY 398

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           EKA+E   + L I+ ++S AY   GL+ H  G +++AI      L I+P+     Y  A 
Sbjct: 399 EKAIEYYNKALEINTQYSAAYINLGLIEHNFGNYQEAINYYKRALEINPNYSLSYYNIAL 458

Query: 628 CYHAIGEYREAIKDYDAALDL 648
              ++ +Y +A++D++ AL+L
Sbjct: 459 AEMSLEDYDKALEDFNHALEL 479



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 6/207 (2%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E L+ +       ++ E AI    + I  N  + + +  RG A+  L     AI+D  +A
Sbjct: 9   EELLNKAKESFENKDYEKAIEYIDKVIFYNGDSYDLYHNRGLAKLNLRLYEGAIKDFDRA 68

Query: 476 LEF-EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY--LGLALSSIGE 532
           +E  + NS    +ERG+  F    +  A+ED +  V+LDK + +++ Y  +GL   ++ E
Sbjct: 69  IELGDYNS---YYERGLAKFYMAFYKEAIEDFNKVVELDKSSAASFAYNTIGLCKYNLNE 125

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           + +A + + KAI+ + N + A+ ++      +   ++AL  L + L ID    + Y    
Sbjct: 126 FDEALKYYNKAIETNPNLIIAYHNIALLKHSMGLDDEALSYLNKALEIDTNNIETYLKIY 185

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            +  GLG  ++A + L   + + P ++
Sbjct: 186 SIKLGLGLEREANEYLDKIMEMYPDDL 212



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 93/203 (45%)

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     + R G  +   G   E+++ L KALE  PN  D  ++      K    + A+  
Sbjct: 209 PDDLYIYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLNLNDEALSY 268

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L   +++   N   Y  + L   ++G+Y  A     K +++D   +  +  +     +L 
Sbjct: 269 LEKALQISPNNADTYFKIFLIKRALGDYDGALSCLEKILEIDDTDVAIYNEIALIKIELE 328

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+AL  L + L ID   ++ Y+  GL+ H    +++AIK+ +  L ++ S     Y  
Sbjct: 329 LYEEALYYLNKALCIDNNNAEIYNTIGLVYHYKRNYEEAIKNFNKALELNTSMDMAYYNI 388

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
              Y+ + +Y +AI+ Y+ AL++
Sbjct: 389 GLSYYEMHDYEKAIEYYNKALEI 411



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 142/320 (44%), Gaps = 13/320 (4%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           V  + KS + S  +  + G+ + N  ++  A+  +++ ++ +P     +I        + 
Sbjct: 100 VVELDKSSAASFAYN-TIGLCKYNLNEFDEALKYYNKAIETNP---NLIIAYHNIALLKH 155

Query: 430 EL---EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
            +   + A+S   +A++ + +  E + +    +  LG   EA + L K +E  P+   I 
Sbjct: 156 SMGLDDEALSYLNKALEIDTNNIETYLKIYSIKLGLGLEREANEYLDKIMEMYPDDLYIY 215

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
              G +         ++E L   ++++     AY  +  AL  +    +A     KA+Q+
Sbjct: 216 DRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLNLNDEALSYLEKALQI 275

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
             N  + +  +    + L + + AL CL+++L ID      Y+   L+   L  +++A+ 
Sbjct: 276 SPNNADTYFKIFLIKRALGDYDGALSCLEKILEIDDTDVAIYNEIALIKIELELYEEALY 335

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF--- 663
            L+  L ID +N E        YH    Y EAIK+++ AL+L       +    L++   
Sbjct: 336 YLNKALCIDNNNAEIYNTIGLVYHYKRNYEEAIKNFNKALELNTSMDMAYYNIGLSYYEM 395

Query: 664 --YQKEIALYT-ASKINSEF 680
             Y+K I  Y  A +IN+++
Sbjct: 396 HDYEKAIEYYNKALEINTQY 415



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 94/180 (52%), Gaps = 6/180 (3%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           NS + L  +   +F+ KD+  A+E +   +  + ++   Y   GLA  ++  Y+ A +  
Sbjct: 6   NSIEELLNKAKESFENKDYEKAIEYIDKVIFYNGDSYDLYHNRGLAKLNLRLYEGAIKDF 65

Query: 541 LKAIQL-DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR--FSKAYHLRGLLLHG 597
            +AI+L D N     G L +FY  +A  ++A+E   +V+ +DK    S AY+  GL  + 
Sbjct: 66  DRAIELGDYNSYYERG-LAKFY--MAFYKEAIEDFNKVVELDKSSAASFAYNTIGLCKYN 122

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           L +  +A+K  +  +  +P+ I   +  A   H++G   EA+   + AL+++ +++E ++
Sbjct: 123 LNEFDEALKYYNKAIETNPNLIIAYHNIALLKHSMGLDDEALSYLNKALEIDTNNIETYL 182


>gi|255014061|ref|ZP_05286187.1| TPR repeat-containing protein [Bacteroides sp. 2_1_7]
 gi|410101707|ref|ZP_11296635.1| hypothetical protein HMPREF0999_00407 [Parabacteroides sp. D25]
 gi|409239505|gb|EKN32289.1| hypothetical protein HMPREF0999_00407 [Parabacteroides sp. D25]
          Length = 707

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 128/289 (44%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           IS    I+ D  L+ G   +    Y  +I  F+Q++K  P   E    R  A+    + +
Sbjct: 15  ISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFK 74

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            A  D T  +Q NP   +A+  RG AR +  +  EAI D  K LEF+P    +L    + 
Sbjct: 75  GAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVA 134

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             + KD+N A +     +    +    Y   G      G+  KA   + KAI++D  +  
Sbjct: 135 FIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAP 194

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A+G+    +  + + + AL  L + L +D R S  Y  RGL+ + +   + A+ D    +
Sbjct: 195 AYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVI 254

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
            +D  N+   + R      +G+   AI+D+D  +  E D+   +  + L
Sbjct: 255 SMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRAL 303



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +D ++K +P +  A   R   R  QR+  AAI D+ EAI+ +P   EA+  RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677

Query: 464 ESVEAIQDLSKALEF 478
           +    I DLSKA E 
Sbjct: 678 DVNRGIADLSKAGEL 692



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 76/170 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG   + +G    A++ +++ ++ DP Y  A   R        + + A++D  EA++ 
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  RG  R  + +   A+ D  + +  +  +      RG++ F+  D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    ++ + +N  AY    L     G+Y+ A + +   ++    FL  +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E E  + D+   I+ NP    A+  R   R A  +   AI D ++A+E +P  A+  + R
Sbjct: 610 EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNR 669

Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
           G+      D N  + DLS   +L
Sbjct: 670 GLARLSQGDVNRGIADLSKAGEL 692



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 55/137 (40%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + ++RG+ +        A++ +DQ++  D     A   RG  R    +   AI DF   I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           Q  P    A+  R   R   G+   A+QD    L+  P        R     K  D   A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348

Query: 503 VEDLSACVKLDKENKSA 519
             D  A +K++++ K+ 
Sbjct: 349 DRDYWAAIKMEEQAKNG 365



 Score = 40.0 bits (92), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 10/274 (3%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R +RG+ +   G    AI  FD +++++P    A   R   R    +   A+ D+   ++
Sbjct: 264 RFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLK 323

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA-A 502
             P+    +  R +A+  LG++V A +D   A++ E  + +    +   +      N  A
Sbjct: 324 QYPTFLPGFVSRSEAKRKLGDNVGADRDYWAAIKMEEQAKNGQLPKTSSSSSNTAVNGDA 383

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE-EAHLKAIQLDRNF---LEAWGHLT 558
             D S     ++ +K+   +  L +    + +K++ ++ ++    DRN    LE    LT
Sbjct: 384 KTDDSEENTREQSDKNINKFNRLVVYDKEQERKSKYQSEVRGRVQDRNVHVDLEPQFVLT 443

Query: 559 QF-----YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
            +      + L   +K +E     + + ++         L    +  H  +I + S+ + 
Sbjct: 444 YYEKADPVKKLVYYDKMVEDYNGQMVLKRKLRITNEEAALTEDQIAVHFASIDEYSAEIE 503

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            DP+N    + RA  +  + ++ EAIK++  A++
Sbjct: 504 RDPNNANAYFGRAMDFMLVQDFSEAIKNFSEAIE 537


>gi|423332155|ref|ZP_17309939.1| hypothetical protein HMPREF1075_01952 [Parabacteroides distasonis
           CL03T12C09]
 gi|409229996|gb|EKN22868.1| hypothetical protein HMPREF1075_01952 [Parabacteroides distasonis
           CL03T12C09]
          Length = 707

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 129/292 (44%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           +  IS    I+ D  L+ G   +    Y  +I  F+Q++K  P   E    R  A+    
Sbjct: 12  IFTISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLD 71

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + + A  D T  +Q NP   +A+  RG AR +  +  EAI D  K LEF+P    +L   
Sbjct: 72  DFKGAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNM 131

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            +   + KD+N A +     +    +    Y   G      G+  KA   + KAI++D  
Sbjct: 132 AVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPY 191

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           +  A+G+    +  + + + AL  L + L +D R S  Y  RGL+ + +   + A+ D  
Sbjct: 192 YAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYD 251

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             + +D  N+   + R      +G+   AI+D+D  +  E D+   +  + L
Sbjct: 252 QVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRAL 303



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +D ++K +P +  A   R   R  QR+  AAI D+ EAI+ +P   EA+  RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677

Query: 464 ESVEAIQDLSKALEF 478
           +    I DLSKA E 
Sbjct: 678 DVNRGIADLSKAGEL 692



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 76/170 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG   + +G    A++ +++ ++ DP Y  A   R        + + A++D  EA++ 
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  RG  R  + +   A+ D  + +  +  +      RG++ F+  D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIE 282

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    ++ + +N  AY    L     G+Y+ A + +   ++    FL  +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 55/137 (40%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + ++RG+ +        A++ +DQ++  D     A   RG  R    +   AI DF   I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           Q  P    A+  R   R   G+   A+QD    L+  P        R     K  D   A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348

Query: 503 VEDLSACVKLDKENKSA 519
             D  A +K++++ K+ 
Sbjct: 349 DRDYWAAIKMEEQAKNG 365



 Score = 40.8 bits (94), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E E  + D+   I+ NP    A+  R   R A  +   AI D ++A+E +P  A+  + R
Sbjct: 610 EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNR 669

Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
           G+      D N  + DLS   +L
Sbjct: 670 GLARLSQGDVNRGIADLSKAGEL 692



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 10/274 (3%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R +RG+ +   G    AI  FD +++++P    A   R   R    +   A+ D+   ++
Sbjct: 264 RFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLK 323

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA-A 502
             P+    +  R +A+  LG++V A +D   A++ E  + +    +   +      N  A
Sbjct: 324 QYPTFLPGFVSRSEAKRKLGDNVGADRDYWAAIKMEEQAKNGQLPKTSSSSSNTAVNGDA 383

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE-EAHLKAIQLDRNF---LEAWGHLT 558
             D S     ++ +K+   +  L +    + +K++ ++ ++    DRN    LE    LT
Sbjct: 384 KTDDSEENTREQSDKNINKFNRLVVYDKEQERKSKYQSEVRGRVQDRNVHVDLEPQFVLT 443

Query: 559 QF-----YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
            +      + L   +K +E     + + ++         L    +  H  +I + S+ + 
Sbjct: 444 YYEKADPVKKLVYYDKMVEDYNGQMVLKRKLRITNEEAALTEDQIAVHFASIDEYSAEIE 503

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            DP+N    + RA  +  + ++ EAIK++  A++
Sbjct: 504 RDPNNANAYFGRAMDFMLVQDFSEAIKNFSEAIE 537


>gi|390337020|ref|XP_792593.3| PREDICTED: uncharacterized protein LOC587791 isoform 2
            [Strongylocentrotus purpuratus]
          Length = 2128

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 37/301 (12%)

Query: 396  KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
            K   A+   + ILK +  +  A   R        +L  AI +FT+ ++ +P   EA+ +R
Sbjct: 1210 KPTKALEDLNSILKINKEHVGAYRSRAQIFTSMGDLTMAIMNFTQTVKLDPQDHEAFFKR 1269

Query: 456  GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF-KDFNAAVEDLSACVKLDK 514
             +   A GE + A++D  +A    PN    + +RG+  F   K++ AA++D S  +  + 
Sbjct: 1270 AELYEARGEMLLALEDYREATRLMPNMTKAIMKRGLYQFDMNKNWMAAIKDFSELLVQEP 1329

Query: 515  ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---------GHLTQFYQDLA 565
             N   +TY G A +  G Y +A      AI LD N   A+          H  Q  QDL+
Sbjct: 1330 NNALGHTYRGRAFAKQGMYPEAVADLSAAIHLDPNSSVAFYHRGCLLRKAHPKQALQDLS 1389

Query: 566  NS--------------------------EKALECLQQVLYIDKRFSKAYHLRGLL-LHGL 598
             S                          E A+     VL +D+  + A+   GL+ +  L
Sbjct: 1390 VSILLDDGHSNGMAFFHRGILYMAMGRHEDAITDFDNVLKLDRTIAAAHVNLGLIYMTKL 1449

Query: 599  GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
              + KAI+  ++ + +DP+ +  +  R   YH I E + A+KD+  A+ L  D    ++L
Sbjct: 1450 DNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKIHELKNALKDFTRAIHLRPDQQHYYML 1509

Query: 659  Q 659
            +
Sbjct: 1510 R 1510



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 23/303 (7%)

Query: 383  FRLSRGIA--QVNEG--------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
             +L R IA   VN G         Y  AI  F   +K DP Y  A++ RG A     EL+
Sbjct: 1428 LKLDRTIAAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKIHELK 1487

Query: 433  AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
             A+ DFT AI   P     +  RGQ    +     A   +  A E          ++  V
Sbjct: 1488 NALKDFTRAIHLRPDQQHYYMLRGQILLRMKNLELASFCVLHAAELAHGLGSSPTQQAAV 1547

Query: 493  NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-- 550
                 +++ A+E LS+ VK+       Y  LG       +Y+ A ++  KA+ L + +  
Sbjct: 1548 QSFLHNYSKAIEVLSSTVKVSP-TAPLYILLGKTEIKAKKYQPAVQSLEKALDLMKPWQE 1606

Query: 551  --------LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
                     E +  +   + ++ N  KA E     + I+  + +AY+ RGL    L Q  
Sbjct: 1607 RQSWPLEAAEVYYLIGMCHMEIPNVYKAYEAFNSAIKINPEYPEAYYQRGLTRTRLHQ-A 1665

Query: 603  KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ-CL 661
            K I D +  L ++P   +    RA+ Y   G Y + I + + A+ L+ +S+  ++ +  L
Sbjct: 1666 KGILDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQAIRLQPNSVRAYLYRGAL 1725

Query: 662  AFY 664
             +Y
Sbjct: 1726 KYY 1728



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 9/231 (3%)

Query: 438  FTEAIQSNPSAGEA-WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
             TE + ++P        RRG     LG+  +A  DL++A+  EP   D    R ++    
Sbjct: 1149 MTEKLDNDPKPSPFDLTRRGVIYRKLGKLKQAWDDLNRAIALEPLLLDAYWNRHLLYLLK 1208

Query: 497  KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
            +    A+EDL++ +K++KE+  AY       +S+G+   A     + ++LD    EA+  
Sbjct: 1209 EKPTKALEDLNSILKINKEHVGAYRSRAQIFTSMGDLTMAIMNFTQTVKLDPQDHEAFFK 1268

Query: 557  LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH-KKAIKDLSSGLGID 615
              + Y+       ALE  ++   +    +KA   RGL    + ++   AIKD S  L  +
Sbjct: 1269 RAELYEARGEMLLALEDYREATRLMPNMTKAIMKRGLYQFDMNKNWMAAIKDFSELLVQE 1328

Query: 616  PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            P+N      R   +   G Y EA+ D  AA+ L+ +S        +AFY +
Sbjct: 1329 PNNALGHTYRGRAFAKQGMYPEAVADLSAAIHLDPNS-------SVAFYHR 1372



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 116/255 (45%), Gaps = 13/255 (5%)

Query: 421  RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-E 479
            +   ++F      AI   +  ++ +P+A   +   G+      +   A+Q L KAL+  +
Sbjct: 1544 QAAVQSFLHNYSKAIEVLSSTVKVSPTA-PLYILLGKTEIKAKKYQPAVQSLEKALDLMK 1602

Query: 480  P---------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
            P          +A++ +  G+ + +  +   A E  ++ +K++ E   AY   GL  + +
Sbjct: 1603 PWQERQSWPLEAAEVYYLIGMCHMEIPNVYKAYEAFNSAIKINPEYPEAYYQRGLTRTRL 1662

Query: 531  GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
             + K   + + +A+ L+    +A+     +Y       K +    Q + +     +AY  
Sbjct: 1663 HQAKGILDFN-RALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQAIRLQPNSVRAYLY 1721

Query: 591  RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL-E 649
            RG L + +  H  AIKDL   + +D +     + RA CYH  G+Y++A +DY   L L +
Sbjct: 1722 RGALKYYISAHALAIKDLCQAIELDTTCSLAYFNRAVCYHTTGDYQKAQRDYGIVLMLGD 1781

Query: 650  LDSMEKFVLQCLAFY 664
             +S++  + + L ++
Sbjct: 1782 ENSLKVLINRGLMYF 1796



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 400  AISIFDQILKEDPMYPEALIGRGTA--------------RAFQREL-------------- 431
            A++I+   L+ +P + +A +GRG A              R +QR +              
Sbjct: 1838 AVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVLLARRDYQRSIILEPECLVGRVNLA 1897

Query: 432  ---------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
                     + A + FT  ++ NP+   A + R      + +   A+ D++ AL     S
Sbjct: 1898 YNMQISGSYKIAWNLFTTCLKLNPNYRPALEGRAIVSLQMSDPYAALLDMNNALRIG-KS 1956

Query: 483  ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
            A++   RG+VN   +D  +A+ D  A +K DK    AY        S  ++ +A + + K
Sbjct: 1957 AELFVNRGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDK 2016

Query: 543  AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
             ++L+ +   A  +         +S+ ALE   + + +    +  Y  RG L   L +++
Sbjct: 2017 TLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQ 2076

Query: 603  KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             A KD S  L + P +      RA     +G   EAI DY  A++++
Sbjct: 2077 LAEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEIQ 2123



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 4/160 (2%)

Query: 503  VEDLSACVKLDKENKSA---YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             E L    KLD + K +    T  G+    +G+ K+A +   +AI L+   L+A+ +   
Sbjct: 1144 TEALYMTEKLDNDPKPSPFDLTRRGVIYRKLGKLKQAWDDLNRAIALEPLLLDAYWNRHL 1203

Query: 560  FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             Y       KALE L  +L I+K    AY  R  +   +G    AI + +  + +DP + 
Sbjct: 1204 LYLLKEKPTKALEDLNSILKINKEHVGAYRSRAQIFTSMGDLTMAIMNFTQTVKLDPQDH 1263

Query: 620  ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
            E  + RA  Y A GE   A++DY  A  L + +M K +++
Sbjct: 1264 EAFFKRAELYEARGEMLLALEDYREATRL-MPNMTKAIMK 1302



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 15/225 (6%)

Query: 361  EAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQI 407
            EA   +    TR+ ++K I +DF              LSR       G+Y+  I   +Q 
Sbjct: 1650 EAYYQRGLTRTRLHQAKGI-LDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQA 1708

Query: 408  LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
            ++  P    A + RG  + +      AI D  +AI+ + +   A+  R       G+  +
Sbjct: 1709 IRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIELDTTCSLAYFNRAVCYHTTGDYQK 1768

Query: 468  AIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
            A +D    L   + NS  +L  RG++ F  KD+  A +D S  V++   +      LGL 
Sbjct: 1769 AQRDYGIVLMLGDENSLKVLINRGLMYFAQKDYKNARDDFSQAVEVSPRDPKIRHTLGLC 1828

Query: 527  LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
               +   + A   +  A++ +  F++A+      + D  + +  L
Sbjct: 1829 CHKLNRLEDAVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVL 1873



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 62/309 (20%), Positives = 123/309 (39%), Gaps = 38/309 (12%)

Query: 380  SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
            S+   ++RG+    +  Y +A   F Q ++  P  P+     G        LE A++ ++
Sbjct: 1784 SLKVLINRGLMYFAQKDYKNARDDFSQAVEVSPRDPKIRHTLGLCCHKLNRLEDAVAIYS 1843

Query: 440  EAIQSNPSAGEAWKRRGQARAALGES---VEAIQDLSKA--------------------- 475
             A+++NP   +A+  RG A    G     + A +D  ++                     
Sbjct: 1844 SALEANPFFIDAYLGRGNAFMDYGHPQTVLLARRDYQRSIILEPECLVGRVNLAYNMQIS 1903

Query: 476  -------------LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
                         L+  PN    L  R IV+ +  D  AA+ D++  +++ K +   +  
Sbjct: 1904 GSYKIAWNLFTTCLKLNPNYRPALEGRAIVSLQMSDPYAALLDMNNALRIGK-SAELFVN 1962

Query: 523  LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
             G+    + +++ A      AI+ D+++  A+ +    Y       +AL+   + L ++ 
Sbjct: 1963 RGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDKTLELNG 2022

Query: 583  RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
                A   R +        K A++D    + + P +    + R + Y ++  Y+ A KDY
Sbjct: 2023 SDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQLAEKDY 2082

Query: 643  DAALDLELD 651
              AL L+ D
Sbjct: 2083 SEALSLQPD 2091



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 102/287 (35%), Gaps = 71/287 (24%)

Query: 400  AISIFDQILKEDPMYPEALIGRGTARA---------------------FQRELEAA---- 434
            A   F+  +K +P YPEA   RG  R                      FQ  L  A    
Sbjct: 1634 AYEAFNSAIKINPEYPEAYYQRGLTRTRLHQAKGILDFNRALALNPKLFQAYLSRAAYYG 1693

Query: 435  --------ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
                    I +  +AI+  P++  A+  RG  +  +     AI+DL +A+E         
Sbjct: 1694 QRGRYSKGIYNCNQAIRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIE--------- 1744

Query: 487  HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
                                     LD     AY    +   + G+Y+KA+  +   + L
Sbjct: 1745 -------------------------LDTTCSLAYFNRAVCYHTTGDYQKAQRDYGIVLML 1779

Query: 547  -DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
             D N L+   +    Y    + + A +   Q + +  R  K  H  GL  H L + + A+
Sbjct: 1780 GDENSLKVLINRGLMYFAQKDYKNARDDFSQAVEVSPRDPKIRHTLGLCCHKLNRLEDAV 1839

Query: 606  KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI---KDYDAALDLE 649
               SS L  +P  I+    R + +   G  +  +   +DY  ++ LE
Sbjct: 1840 AIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVLLARRDYQRSIILE 1886



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 11/178 (6%)

Query: 372  RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            RI KS  + V+    RG+       + SA+  F   +K+D  Y  A           R+ 
Sbjct: 1952 RIGKSAELFVN----RGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQF 2007

Query: 432  EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
              A+  + + ++ N S   A   R   +    +S  A++D  KA++  P SA +   RG 
Sbjct: 2008 MQALQFYDKTLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGN 2067

Query: 492  VNFKFKDFNAAVEDLSACVKLDKENKSAYT-------YLGLALSSIGEYKKAEEAHLK 542
            +    K +  A +D S  + L  ++   +         LG    +I +YK+A E   K
Sbjct: 2068 LYTSLKRYQLAEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEIQSK 2125


>gi|390337018|ref|XP_003724472.1| PREDICTED: uncharacterized protein LOC587791 isoform 1
            [Strongylocentrotus purpuratus]
          Length = 2128

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 37/301 (12%)

Query: 396  KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
            K   A+   + ILK +  +  A   R        +L  AI +FT+ ++ +P   EA+ +R
Sbjct: 1210 KPTKALEDLNSILKINKEHVGAYRSRAQIFTSMGDLTMAIMNFTQTVKLDPQDHEAFFKR 1269

Query: 456  GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF-KDFNAAVEDLSACVKLDK 514
             +   A GE + A++D  +A    PN    + +RG+  F   K++ AA++D S  +  + 
Sbjct: 1270 AELYEARGEMLLALEDYREATRLMPNMTKAIMKRGLYQFDMNKNWMAAIKDFSELLVQEP 1329

Query: 515  ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---------GHLTQFYQDLA 565
             N   +TY G A +  G Y +A      AI LD N   A+          H  Q  QDL+
Sbjct: 1330 NNALGHTYRGRAFAKQGMYPEAVADLSAAIHLDPNSSVAFYHRGCLLRKAHPKQALQDLS 1389

Query: 566  NS--------------------------EKALECLQQVLYIDKRFSKAYHLRGLL-LHGL 598
             S                          E A+     VL +D+  + A+   GL+ +  L
Sbjct: 1390 VSILLDDGHSNGMAFFHRGILYMAMGRHEDAITDFDNVLKLDRTIAAAHVNLGLIYMTKL 1449

Query: 599  GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
              + KAI+  ++ + +DP+ +  +  R   YH I E + A+KD+  A+ L  D    ++L
Sbjct: 1450 DNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKIHELKNALKDFTRAIHLRPDQQHYYML 1509

Query: 659  Q 659
            +
Sbjct: 1510 R 1510



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 23/303 (7%)

Query: 383  FRLSRGIA--QVNEG--------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
             +L R IA   VN G         Y  AI  F   +K DP Y  A++ RG A     EL+
Sbjct: 1428 LKLDRTIAAAHVNLGLIYMTKLDNYHKAIQKFTNAIKVDPTYVRAIVCRGEAYHKIHELK 1487

Query: 433  AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
             A+ DFT AI   P     +  RGQ    +     A   +  A E          ++  V
Sbjct: 1488 NALKDFTRAIHLRPDQQHYYMLRGQILLRMKNLELASFCVLHAAELAHGLGSSPTQQAAV 1547

Query: 493  NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-- 550
                 +++ A+E LS+ VK+       Y  LG       +Y+ A ++  KA+ L + +  
Sbjct: 1548 QSFLHNYSKAIEVLSSTVKVSP-TAPLYILLGKTEIKAKKYQPAVQSLEKALDLMKPWQE 1606

Query: 551  --------LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
                     E +  +   + ++ N  KA E     + I+  + +AY+ RGL    L Q  
Sbjct: 1607 RQSWPLEAAEVYYLIGMCHMEIPNVYKAYEAFNSAIKINPEYPEAYYQRGLTRTRLHQ-A 1665

Query: 603  KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ-CL 661
            K I D +  L ++P   +    RA+ Y   G Y + I + + A+ L+ +S+  ++ +  L
Sbjct: 1666 KGILDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQAIRLQPNSVRAYLYRGAL 1725

Query: 662  AFY 664
             +Y
Sbjct: 1726 KYY 1728



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 9/231 (3%)

Query: 438  FTEAIQSNPSAGEA-WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
             TE + ++P        RRG     LG+  +A  DL++A+  EP   D    R ++    
Sbjct: 1149 MTEKLDNDPKPSPFDLTRRGVIYRKLGKLKQAWDDLNRAIALEPLLLDAYWNRHLLYLLK 1208

Query: 497  KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
            +    A+EDL++ +K++KE+  AY       +S+G+   A     + ++LD    EA+  
Sbjct: 1209 EKPTKALEDLNSILKINKEHVGAYRSRAQIFTSMGDLTMAIMNFTQTVKLDPQDHEAFFK 1268

Query: 557  LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH-KKAIKDLSSGLGID 615
              + Y+       ALE  ++   +    +KA   RGL    + ++   AIKD S  L  +
Sbjct: 1269 RAELYEARGEMLLALEDYREATRLMPNMTKAIMKRGLYQFDMNKNWMAAIKDFSELLVQE 1328

Query: 616  PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            P+N      R   +   G Y EA+ D  AA+ L+ +S        +AFY +
Sbjct: 1329 PNNALGHTYRGRAFAKQGMYPEAVADLSAAIHLDPNS-------SVAFYHR 1372



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 116/255 (45%), Gaps = 13/255 (5%)

Query: 421  RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF-E 479
            +   ++F      AI   +  ++ +P+A   +   G+      +   A+Q L KAL+  +
Sbjct: 1544 QAAVQSFLHNYSKAIEVLSSTVKVSPTA-PLYILLGKTEIKAKKYQPAVQSLEKALDLMK 1602

Query: 480  P---------NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
            P          +A++ +  G+ + +  +   A E  ++ +K++ E   AY   GL  + +
Sbjct: 1603 PWQERQSWPLEAAEVYYLIGMCHMEIPNVYKAYEAFNSAIKINPEYPEAYYQRGLTRTRL 1662

Query: 531  GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
             + K   + + +A+ L+    +A+     +Y       K +    Q + +     +AY  
Sbjct: 1663 HQAKGILDFN-RALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQAIRLQPNSVRAYLY 1721

Query: 591  RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL-E 649
            RG L + +  H  AIKDL   + +D +     + RA CYH  G+Y++A +DY   L L +
Sbjct: 1722 RGALKYYISAHALAIKDLCQAIELDTTCSLAYFNRAVCYHTTGDYQKAQRDYGIVLMLGD 1781

Query: 650  LDSMEKFVLQCLAFY 664
             +S++  + + L ++
Sbjct: 1782 ENSLKVLINRGLMYF 1796



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 400  AISIFDQILKEDPMYPEALIGRGTA--------------RAFQREL-------------- 431
            A++I+   L+ +P + +A +GRG A              R +QR +              
Sbjct: 1838 AVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVLLARRDYQRSIILEPECLVGRVNLA 1897

Query: 432  ---------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
                     + A + FT  ++ NP+   A + R      + +   A+ D++ AL     S
Sbjct: 1898 YNMQISGSYKIAWNLFTTCLKLNPNYRPALEGRAIVSLQMSDPYAALLDMNNALRIG-KS 1956

Query: 483  ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
            A++   RG+VN   +D  +A+ D  A +K DK    AY        S  ++ +A + + K
Sbjct: 1957 AELFVNRGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDK 2016

Query: 543  AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
             ++L+ +   A  +         +S+ ALE   + + +    +  Y  RG L   L +++
Sbjct: 2017 TLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQ 2076

Query: 603  KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             A KD S  L + P +      RA     +G   EAI DY  A++++
Sbjct: 2077 LAEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEIQ 2123



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 4/160 (2%)

Query: 503  VEDLSACVKLDKENKSA---YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             E L    KLD + K +    T  G+    +G+ K+A +   +AI L+   L+A+ +   
Sbjct: 1144 TEALYMTEKLDNDPKPSPFDLTRRGVIYRKLGKLKQAWDDLNRAIALEPLLLDAYWNRHL 1203

Query: 560  FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             Y       KALE L  +L I+K    AY  R  +   +G    AI + +  + +DP + 
Sbjct: 1204 LYLLKEKPTKALEDLNSILKINKEHVGAYRSRAQIFTSMGDLTMAIMNFTQTVKLDPQDH 1263

Query: 620  ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
            E  + RA  Y A GE   A++DY  A  L + +M K +++
Sbjct: 1264 EAFFKRAELYEARGEMLLALEDYREATRL-MPNMTKAIMK 1302



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 93/225 (41%), Gaps = 15/225 (6%)

Query: 361  EAKRNKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQI 407
            EA   +    TR+ ++K I +DF              LSR       G+Y+  I   +Q 
Sbjct: 1650 EAYYQRGLTRTRLHQAKGI-LDFNRALALNPKLFQAYLSRAAYYGQRGRYSKGIYNCNQA 1708

Query: 408  LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
            ++  P    A + RG  + +      AI D  +AI+ + +   A+  R       G+  +
Sbjct: 1709 IRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIELDTTCSLAYFNRAVCYHTTGDYQK 1768

Query: 468  AIQDLSKALEF-EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
            A +D    L   + NS  +L  RG++ F  KD+  A +D S  V++   +      LGL 
Sbjct: 1769 AQRDYGIVLMLGDENSLKVLINRGLMYFAQKDYKNARDDFSQAVEVSPRDPKIRHTLGLC 1828

Query: 527  LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
               +   + A   +  A++ +  F++A+      + D  + +  L
Sbjct: 1829 CHKLNRLEDAVAIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVL 1873



 Score = 47.8 bits (112), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 62/309 (20%), Positives = 123/309 (39%), Gaps = 38/309 (12%)

Query: 380  SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
            S+   ++RG+    +  Y +A   F Q ++  P  P+     G        LE A++ ++
Sbjct: 1784 SLKVLINRGLMYFAQKDYKNARDDFSQAVEVSPRDPKIRHTLGLCCHKLNRLEDAVAIYS 1843

Query: 440  EAIQSNPSAGEAWKRRGQARAALGES---VEAIQDLSKA--------------------- 475
             A+++NP   +A+  RG A    G     + A +D  ++                     
Sbjct: 1844 SALEANPFFIDAYLGRGNAFMDYGHPQTVLLARRDYQRSIILEPECLVGRVNLAYNMQIS 1903

Query: 476  -------------LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
                         L+  PN    L  R IV+ +  D  AA+ D++  +++ K +   +  
Sbjct: 1904 GSYKIAWNLFTTCLKLNPNYRPALEGRAIVSLQMSDPYAALLDMNNALRIGK-SAELFVN 1962

Query: 523  LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
             G+    + +++ A      AI+ D+++  A+ +    Y       +AL+   + L ++ 
Sbjct: 1963 RGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQFMQALQFYDKTLELNG 2022

Query: 583  RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
                A   R +        K A++D    + + P +    + R + Y ++  Y+ A KDY
Sbjct: 2023 SDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGNLYTSLKRYQLAEKDY 2082

Query: 643  DAALDLELD 651
              AL L+ D
Sbjct: 2083 SEALSLQPD 2091



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 102/287 (35%), Gaps = 71/287 (24%)

Query: 400  AISIFDQILKEDPMYPEALIGRGTARA---------------------FQRELEAA---- 434
            A   F+  +K +P YPEA   RG  R                      FQ  L  A    
Sbjct: 1634 AYEAFNSAIKINPEYPEAYYQRGLTRTRLHQAKGILDFNRALALNPKLFQAYLSRAAYYG 1693

Query: 435  --------ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
                    I +  +AI+  P++  A+  RG  +  +     AI+DL +A+E         
Sbjct: 1694 QRGRYSKGIYNCNQAIRLQPNSVRAYLYRGALKYYISAHALAIKDLCQAIE--------- 1744

Query: 487  HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
                                     LD     AY    +   + G+Y+KA+  +   + L
Sbjct: 1745 -------------------------LDTTCSLAYFNRAVCYHTTGDYQKAQRDYGIVLML 1779

Query: 547  -DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
             D N L+   +    Y    + + A +   Q + +  R  K  H  GL  H L + + A+
Sbjct: 1780 GDENSLKVLINRGLMYFAQKDYKNARDDFSQAVEVSPRDPKIRHTLGLCCHKLNRLEDAV 1839

Query: 606  KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI---KDYDAALDLE 649
               SS L  +P  I+    R + +   G  +  +   +DY  ++ LE
Sbjct: 1840 AIYSSALEANPFFIDAYLGRGNAFMDYGHPQTVLLARRDYQRSIILE 1886



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 11/178 (6%)

Query: 372  RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            RI KS  + V+    RG+       + SA+  F   +K+D  Y  A           R+ 
Sbjct: 1952 RIGKSAELFVN----RGVVNQFLQDHESAMIDFQAAIKKDKSYALAYFNAANLYFSNRQF 2007

Query: 432  EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
              A+  + + ++ N S   A   R   +    +S  A++D  KA++  P SA +   RG 
Sbjct: 2008 MQALQFYDKTLELNGSDESALLNRAITKVLTRDSKGALEDFFKAVKLSPLSAHLYFNRGN 2067

Query: 492  VNFKFKDFNAAVEDLSACVKLDKENKSAYT-------YLGLALSSIGEYKKAEEAHLK 542
            +    K +  A +D S  + L  ++   +         LG    +I +YK+A E   K
Sbjct: 2068 LYTSLKRYQLAEKDYSEALSLQPDDPLVHKRRAEVRGRLGRREEAIADYKRAIEIQSK 2125


>gi|428305223|ref|YP_007142048.1| hypothetical protein Cri9333_1649 [Crinalium epipsammum PCC 9333]
 gi|428246758|gb|AFZ12538.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 832

 Score = 97.4 bits (241), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 5/291 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A  + G+Y  A++ FDQ LK  P   +A   +G A       E A++ F +A++  
Sbjct: 397 NKGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVK 456

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  +G A   LG   EA+    +AL+ +P+     + +GI   K      A+  
Sbjct: 457 PDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAA 516

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+  +   A+   G+AL  +G  ++A  A+ KA+++  +  EAW +      +L 
Sbjct: 517 FDQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLG 576

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++AL    Q L +     + +  +G++L  LG +++A+      L + P++ E    +
Sbjct: 577 CYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHEPWSNK 636

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
                 +G Y+EA+  +D  L ++ D  E +     VL  L  YQ+ I  +
Sbjct: 637 GIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAF 687



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 121/269 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A  N G Y  A++ FDQ LK  P   +A   +G         E A++ F +A++  
Sbjct: 261 NKGVALGNLGHYEEALAAFDQALKVKPDQHQAWYNKGNTLVNLERYEEALAAFDQALKVK 320

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  +G     LG   EA+    +AL+ + +     + +G    K   +  A+  
Sbjct: 321 PDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVKSDQHQAWNNKGNALGKLGRYEEAIAA 380

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+  ++  A+   G AL  +G Y++A  A  + +++  +  +AW +      DL 
Sbjct: 381 FDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLG 440

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+AL    Q L +     +A++ +G+ L  LG  ++A+      L + P   +    +
Sbjct: 441 RYEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKPDQHQAWNNK 500

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSME 654
                 +G   EA+  +D AL ++ D  +
Sbjct: 501 GIALGKLGCDEEALAAFDQALKVKSDQHQ 529



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 122/264 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GIA    G+   A++ +++ LK  P   EA   +G         + A++ F +A++  
Sbjct: 533 NKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVK 592

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   + WK +G     LG   EA+    +AL+ +PN  +    +GIV      +  A+  
Sbjct: 593 PDQHQVWKNKGIVLVNLGCYQEALVAFDQALKVKPNDHEPWSNKGIVLVNLGRYQEALIA 652

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+  +    +   G+ L ++G Y++A  A  + +++  +  E W +       L 
Sbjct: 653 FDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVKPDQYEVWNNKGIALGKLG 712

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++AL    Q L +     + ++ +G+ L  LG++++AI      L + P + +  Y +
Sbjct: 713 RYQEALAAFDQTLKVKPDQYEVWNNKGIALVNLGRYQEAITAFDQTLKVKPDDDKIFYNK 772

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
           A CY   G   +AI +   A++L+
Sbjct: 773 ACCYALQGNVEQAINNLQQAINLD 796



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 124/271 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GIA    G    A++ FDQ LK      +A   +G A       E A++ + +A++  
Sbjct: 499 NKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVK 558

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAWK +G     LG   EA+    +AL+ +P+   +   +GIV      +  A+  
Sbjct: 559 PDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVA 618

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+   +   ++  G+ L ++G Y++A  A  + +++  +  E W +      +L 
Sbjct: 619 FDQALKVKPNDHEPWSNKGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNKGIVLVNLG 678

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A+    Q L +     + ++ +G+ L  LG++++A+      L + P   E    +
Sbjct: 679 RYQEAITAFDQTLKVKPDQYEVWNNKGIALGKLGRYQEALAAFDQTLKVKPDQYEVWNNK 738

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
                 +G Y+EAI  +D  L ++ D  + F
Sbjct: 739 GIALVNLGRYQEAITAFDQTLKVKPDDDKIF 769



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 129/282 (45%), Gaps = 5/282 (1%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A++ FDQ LK      +A   +G A       E AI+ F +A++  P   +AW  
Sbjct: 338 GRYEEALAAFDQALKVKSDQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNN 397

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   LG   EA+    + L+ +P+     + +G        +  A+      +K+  
Sbjct: 398 KGNALGDLGRYEEALAAFDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKP 457

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+   G+AL  +G  ++A  A  +A+++  +  +AW +       L   E+AL   
Sbjct: 458 DQHQAWNNKGIALGKLGCDEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAF 517

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q L +     +A++ +G+ L  LG+ ++A+   +  L + P   E    + +    +G 
Sbjct: 518 DQALKVKSDQHQAWNNKGIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGC 577

Query: 635 YREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
           Y+EA+  +D AL ++ D  + +     VL  L  YQ+ +  +
Sbjct: 578 YQEALAAFDQALKVKPDQHQVWKNKGIVLVNLGCYQEALVAF 619



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 118/259 (45%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +YA AI+  DQ LK  P   +A   +G A       E A++ F +A++  P   +AW  +
Sbjct: 237 EYAVAITALDQALKVKPDDHQAWQNKGVALGNLGHYEEALAAFDQALKVKPDQHQAWYNK 296

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L    EA+    +AL+ +P+     + +G V  K   +  A+      +K+  +
Sbjct: 297 GNTLVNLERYEEALAAFDQALKVKPDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVKSD 356

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              A+   G AL  +G Y++A  A  +A+++  +  +AW +      DL   E+AL    
Sbjct: 357 QHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFD 416

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           Q L +     +A++ +G  L  LG++++A+      L + P   +    +      +G  
Sbjct: 417 QTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCD 476

Query: 636 REAIKDYDAALDLELDSME 654
            EA+  +D AL ++ D  +
Sbjct: 477 EEALAAFDQALKVKPDQHQ 495



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 131/291 (45%), Gaps = 5/291 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A    G+Y  AI+ FDQ LK  P   +A   +G A       E A++ F + ++  
Sbjct: 363 NKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAFDQTLKVK 422

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  +G A   LG   EA+    +AL+ +P+     + +GI   K      A+  
Sbjct: 423 PDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAA 482

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+  +   A+   G+AL  +G  ++A  A  +A+++  +  +AW +       L 
Sbjct: 483 FDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNKGIALGKLG 542

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+AL    + L +     +A+  +G  L  LG +++A+      L + P   +    +
Sbjct: 543 RDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAFDQALKVKPDQHQVWKNK 602

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
                 +G Y+EA+  +D AL ++ +  E +     VL  L  YQ+ +  +
Sbjct: 603 GIVLVNLGCYQEALVAFDQALKVKPNDHEPWSNKGIVLVNLGRYQEALIAF 653



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 5/291 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G   VN  +Y  A++ FDQ LK  P   +A   +G         E A++ F +A++  
Sbjct: 295 NKGNTLVNLERYEEALAAFDQALKVKPDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVK 354

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               +AW  +G A   LG   EAI    +AL+ +P+     + +G        +  A+  
Sbjct: 355 SDQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAA 414

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+  +   A+   G AL  +G Y++A  A  +A+++  +  +AW +       L 
Sbjct: 415 FDQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKPDQHQAWNNKGIALGKLG 474

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+AL    Q L +     +A++ +G+ L  LG  ++A+      L +     +    +
Sbjct: 475 CDEEALAAFDQALKVKPDQHQAWNNKGIALGKLGCDEEALAAFDQALKVKSDQHQAWNNK 534

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
                 +G   EA+  Y+ AL ++ D  E +      L  L  YQ+ +A +
Sbjct: 535 GIALGKLGRDEEALAAYNKALKVKPDQHEAWKNKGNTLVNLGCYQEALAAF 585



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 105/226 (46%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +E   AI+   +A++  P   +AW+ +G A   LG   EA+    +AL+ +P+     + 
Sbjct: 236 KEYAVAITALDQALKVKPDDHQAWQNKGVALGNLGHYEEALAAFDQALKVKPDQHQAWYN 295

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G      + +  A+      +K+  ++  A+   G  L  +G Y++A  A  +A+++  
Sbjct: 296 KGNTLVNLERYEEALAAFDQALKVKPDDHQAWNNKGNVLGKLGRYEEALAAFDQALKVKS 355

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           +  +AW +       L   E+A+    Q L +     +A++ +G  L  LG++++A+   
Sbjct: 356 DQHQAWNNKGNALGKLGRYEEAIAAFDQALKVKPDDHQAWNNKGNALGDLGRYEEALAAF 415

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
              L + P   +    + +    +G Y EA+  +D AL ++ D  +
Sbjct: 416 DQTLKVKPDQHQAWNNKGNALGDLGRYEEALAAFDQALKVKPDQHQ 461



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 15/207 (7%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI  VN G+Y  A+  FDQ LK  P   E    +G         + AI+ F + ++  
Sbjct: 635 NKGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNKGIVLVNLGRYQEAITAFDQTLKVK 694

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E W  +G A   LG   EA+    + L+ +P+  ++ + +GI       +  A+  
Sbjct: 695 PDQYEVWNNKGIALGKLGRYQEALAAFDQTLKVKPDQYEVWNNKGIALVNLGRYQEAITA 754

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+  ++   +       +  G  ++A     +AI LD             Y+DLA
Sbjct: 755 FDQTLKVKPDDDKIFYNKACCYALQGNVEQAINNLQQAINLDPK-----------YRDLA 803

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRG 592
            ++   + +QQ     +RF      +G
Sbjct: 804 KTDSDFDAMQQA----ERFQALISFKG 826


>gi|124024552|ref|YP_001018859.1| hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964838|gb|ABM79594.1| Hypothetical protein P9303_28641 [Prochlorococcus marinus str. MIT
           9303]
          Length = 581

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 121/232 (52%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + R  A+ + G Y  AI   +  L+ +P    A + RG AR+   + ++A+SDF++AI+ 
Sbjct: 297 IMRAYAKNDLGDYQGAIDDQNNALEINPDNAVAYVNRGLARSNMGDPKSALSDFSKAIKI 356

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+   A+  RG ++ ALG+   A+ D +KA++ +P +A+    RG+      D+  A+ 
Sbjct: 357 DPANAMAFSNRGVSKQALGDPQGALDDYNKAIKIDPRNANAYANRGVNKGDLGDYQGAIA 416

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D S  + ++ ++  AY   G+A     +Y+ A   + KAI++       + +    Y +L
Sbjct: 417 DYSKAIGINPQHSDAYYNRGIAKLESKDYQGAIADYNKAIRIGTQNARIYLNRGLVYDNL 476

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
            + ++A+    + + +D +++ AY  RGL     G  + AI D +  + +DP
Sbjct: 477 GDYQRAIADYNKAIELDPQYALAYVNRGLAKIKSGDIQGAIADSNKAIELDP 528



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G+  + + + DQ LK       A I R  A+    + + AI D   A++ NP    A+ 
Sbjct: 273 KGREQTMVRLADQALKLRKT-GFAYIMRAYAKNDLGDYQGAIDDQNNALEINPDNAVAYV 331

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG AR+ +G+   A+ D SKA++ +P +A     RG+      D   A++D +  +K+D
Sbjct: 332 NRGLARSNMGDPKSALSDFSKAIKIDPANAMAFSNRGVSKQALGDPQGALDDYNKAIKID 391

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
             N +AY   G+    +G+Y+ A   + KAI ++    +A+ +      +  + + A+  
Sbjct: 392 PRNANAYANRGVNKGDLGDYQGAIADYSKAIGINPQHSDAYYNRGIAKLESKDYQGAIAD 451

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             + + I  + ++ Y  RGL+   LG +++AI D +  + +DP        R       G
Sbjct: 452 YNKAIRIGTQNARIYLNRGLVYDNLGDYQRAIADYNKAIELDPQYALAYVNRGLAKIKSG 511

Query: 634 EYREAIKDYDAALDLE 649
           + + AI D + A++L+
Sbjct: 512 DIQGAIADSNKAIELD 527



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 7/260 (2%)

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
           G A+  R  A+  LG+   AI D + ALE  P++A     RG+      D  +A+ D S 
Sbjct: 293 GFAYIMRAYAKNDLGDYQGAIDDQNNALEINPDNAVAYVNRGLARSNMGDPKSALSDFSK 352

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            +K+D  N  A++  G++  ++G+ + A + + KAI++D     A+ +      DL + +
Sbjct: 353 AIKIDPANAMAFSNRGVSKQALGDPQGALDDYNKAIKIDPRNANAYANRGVNKGDLGDYQ 412

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A+    + + I+ + S AY+ RG+       ++ AI D +  + I   N      R   
Sbjct: 413 GAIADYSKAIGINPQHSDAYYNRGIAKLESKDYQGAIADYNKAIRIGTQNARIYLNRGLV 472

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGD 688
           Y  +G+Y+ AI DY+ A  +ELD         LA+  + +A   +  I       +   +
Sbjct: 473 YDNLGDYQRAIADYNKA--IELDPQ-----YALAYVNRGLAKIKSGDIQGAIADSNKAIE 525

Query: 689 IDPLFKEYWCKRLHPKNVCE 708
           +DP   + +  R   K + +
Sbjct: 526 LDPRMAKAYANRGAAKGMLD 545



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 5/184 (2%)

Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +K+I +D R      +RG+ + + G Y  AI+ + + +  +P + +A   RG A+   ++
Sbjct: 385 NKAIKIDPRNANAYANRGVNKGDLGDYQGAIADYSKAIGINPQHSDAYYNRGIAKLESKD 444

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+D+ +AI+        +  RG     LG+   AI D +KA+E +P  A     RG
Sbjct: 445 YQGAIADYNKAIRIGTQNARIYLNRGLVYDNLGDYQRAIADYNKAIELDPQYALAYVNRG 504

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +   K  D   A+ D +  ++LD     AY   G A   + + K       KA  L    
Sbjct: 505 LAKIKSGDIQGAIADSNKAIELDPRMAKAYANRGAAKGMLDDAKGGCADFKKAASLGSQL 564

Query: 551 LEAW 554
              W
Sbjct: 565 AAQW 568


>gi|427739371|ref|YP_007058915.1| hypothetical protein Riv7116_6007 [Rivularia sp. PCC 7116]
 gi|427374412|gb|AFY58368.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
          Length = 471

 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 130/302 (43%), Gaps = 34/302 (11%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +GI  + + K   A+  F++I+   P YP+A   +G       +LE A+  F +AIQ 
Sbjct: 113 LLQGIVMLEQKKLEPALISFEKIILIKPNYPKAWYEKGLTLYELGQLEDALMCFDKAIQY 172

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    AW R+G     L +   A+    KA+E EPN A+  +E+G   +K +    A+ 
Sbjct: 173 KPKFDLAWYRKGITLFDLEQLESALICFEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIF 232

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++ + +   A+ + G+AL  +G ++ A     KAIQ+  +F EA     +    L
Sbjct: 233 CFDKAIEYNHDLNLAWYHKGIALFDLGNFESALTCFEKAIQIQPDFSEALCRKAEILYSL 292

Query: 565 ANSEKALECLQQVLYIDKR------------------------FSK----------AYHL 590
              E  ++   QVL +D +                        F K          A+  
Sbjct: 293 GQLEDTIDTFNQVLKLDPQNCQVRNRLGTALGKSERYEDAILAFDKVIEIDSHNYAAHCF 352

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RG  LH L +++ AI  L+  + I+P+      +  S  H +    EAI  +D ALDL  
Sbjct: 353 RGYTLHKLRRNEDAIAALNKAIEINPNYDLAWKIYGSVLHKLKRNEEAILFFDKALDLSP 412

Query: 651 DS 652
           D 
Sbjct: 413 DQ 414



 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 6/266 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG++    GK   A+S  D  ++  P Y +AL+ +G     Q++LE A+  F + I   P
Sbjct: 81  RGVSLFRLGKLQEALSSLDIAIEIQPDYLKALLLQGIVMLEQKKLEPALISFEKIILIKP 140

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  +AW  +G     LG+  +A+    KA++++P      + +GI  F  +   +A+   
Sbjct: 141 NYPKAWYEKGLTLYELGQLEDALMCFDKAIQYKPKFDLAWYRKGITLFDLEQLESALICF 200

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++++  + + +   G  L  + + + A     KAI+ + +   AW H      DL N
Sbjct: 201 EKAIEIEPNDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNHDLNLAWYHKGIALFDLGN 260

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E AL C ++ + I   FS+A   +  +L+ LGQ +  I   +  L +DP N +   +R 
Sbjct: 261 FESALTCFEKAIQIQPDFSEALCRKAEILYSLGQLEDTIDTFNQVLKLDPQNCQ---VRN 317

Query: 627 SCYHAIGE---YREAIKDYDAALDLE 649
               A+G+   Y +AI  +D  ++++
Sbjct: 318 RLGTALGKSERYEDAILAFDKVIEID 343



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 124/299 (41%), Gaps = 40/299 (13%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+  +   ++  A+ I++QIL+  P   +AL+ RG A       E A+ DF  AI ++  
Sbjct: 14  GVTLIELQRFEEALLIYNQILEYKPNLYDALVFRGMALQGLENFEEALIDFERAITNSSH 73

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           +   W  RG +   LG+  EA+  L  A+E +P+    L  +GIV  + K    A+    
Sbjct: 74  SHYIWYERGVSLFRLGKLQEALSSLDIAIEIQPDYLKALLLQGIVMLEQKKLEPALISFE 133

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLA 565
             + +      A+   GL L  +G+ + A     KAIQ    F  AW    +T F  DL 
Sbjct: 134 KIILIKPNYPKAWYEKGLTLYELGQLEDALMCFDKAIQYKPKFDLAWYRKGITLF--DLE 191

Query: 566 NSEKALECLQQVLYIDKR------------------------FSKA-----------YHL 590
             E AL C ++ + I+                          F KA           YH 
Sbjct: 192 QLESALICFEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNHDLNLAWYH- 250

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +G+ L  LG  + A+      + I P   E L  +A   +++G+  + I  ++  L L+
Sbjct: 251 KGIALFDLGNFESALTCFEKAIQIQPDFSEALCRKAEILYSLGQLEDTIDTFNQVLKLD 309



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 119/262 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +GI   +  +  SA+  F++ ++ +P        +G       +LE AI  F +AI+ N 
Sbjct: 183 KGITLFDLEQLESALICFEKAIEIEPNDANTWYEKGCTLWKMEKLEYAIFCFDKAIEYNH 242

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  +G A   LG    A+    KA++ +P+ ++ L  +  + +        ++  
Sbjct: 243 DLNLAWYHKGIALFDLGNFESALTCFEKAIQIQPDFSEALCRKAEILYSLGQLEDTIDTF 302

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +KLD +N      LG AL     Y+ A  A  K I++D +   A          L  
Sbjct: 303 NQVLKLDPQNCQVRNRLGTALGKSERYEDAILAFDKVIEIDSHNYAAHCFRGYTLHKLRR 362

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           +E A+  L + + I+  +  A+ + G +LH L ++++AI      L + P     LY +A
Sbjct: 363 NEDAIAALNKAIEINPNYDLAWKIYGSVLHKLKRNEEAILFFDKALDLSPDQPNILYDKA 422

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
            CY A+ +   AI++   A+++
Sbjct: 423 CCYVALNKIDLAIQNLQQAINI 444



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 58/126 (46%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A     +Y  AI  FD++++ D     A   RG      R  E AI+   +AI+ NP+
Sbjct: 320 GTALGKSERYEDAILAFDKVIEIDSHNYAAHCFRGYTLHKLRRNEDAIAALNKAIEINPN 379

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              AWK  G     L  + EAI    KAL+  P+  +IL+++          + A+++L 
Sbjct: 380 YDLAWKIYGSVLHKLKRNEEAILFFDKALDLSPDQPNILYDKACCYVALNKIDLAIQNLQ 439

Query: 508 ACVKLD 513
             + ++
Sbjct: 440 QAININ 445


>gi|346224662|ref|ZP_08845804.1| TPR repeat-containing protein [Anaerophaga thermohalophila DSM
           12881]
          Length = 711

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 34/276 (12%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +++  ++ GIA +  G++  AI+ + +IL   P    A + RG A+    +   A+ DF+
Sbjct: 130 NINLMINLGIAYILTGQFDKAIATYTEILDTSPKLVRAYLNRGLAKFSASDTTGALKDFS 189

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI+ NP   + +  R       G   +A+ D+++A++  P+ +     RGI+ ++  D 
Sbjct: 190 KAIEVNPYIPDGYVNRSMIEYYRGNFDDALADINEAIKLRPDESSFYMNRGIIRYQLDDL 249

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
              +ED    V+++  N   Y   G+  + IG+             LD       G +  
Sbjct: 250 RGTMEDFDKFVEMEPRNAMGYNNRGILRAEIGD-------------LD-------GAIDD 289

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           F + LA   + L  L              + RG+L    G+ +KA+ D +      P   
Sbjct: 290 FSRVLALRGEDLPTL--------------YYRGMLYKEKGEFRKALSDFNIVADAYPDFA 335

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
              Y RA    A+G+ + A  DY+ A+ +E+D  EK
Sbjct: 336 PVYYNRAEVKQALGQTKAAQLDYNTAMKIEMDRREK 371



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 117/285 (41%), Gaps = 34/285 (11%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI  F+QI++  P   E    R   + +  +   A++D  EA++ NP   +A+  RG
Sbjct: 45  YVLAIQYFNQIIRAKPYLAEPYFYRALGKYYLEDYIGALNDCNEALERNPYLVDAYNLRG 104

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                +     +I D  + L+ +P + +++   GI       F+ A+   +  +    + 
Sbjct: 105 ILYQNMKNPEASIADFKRGLDIDPRNINLMINLGIAYILTGQFDKAIATYTEILDTSPKL 164

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-----------------NFLEAWGHLTQ 559
             AY   GLA  S  +   A +   KAI+++                  NF +A   + +
Sbjct: 165 VRAYLNRGLAKFSASDTTGALKDFSKAIEVNPYIPDGYVNRSMIEYYRGNFDDALADINE 224

Query: 560 ----------FYQD-------LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
                     FY +       L +    +E   + + ++ R +  Y+ RG+L   +G   
Sbjct: 225 AIKLRPDESSFYMNRGIIRYQLDDLRGTMEDFDKFVEMEPRNAMGYNNRGILRAEIGDLD 284

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            AI D S  L +   ++  LY R   Y   GE+R+A+ D++   D
Sbjct: 285 GAIDDFSRVLALRGEDLPTLYYRGMLYKEKGEFRKALSDFNIVAD 329



 Score = 48.5 bits (114), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 5/188 (2%)

Query: 376 SKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           SK+I V     D  ++R + +   G +  A++  ++ +K  P      + RG  R    +
Sbjct: 189 SKAIEVNPYIPDGYVNRSMIEYYRGNFDDALADINEAIKLRPDESSFYMNRGIIRYQLDD 248

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           L   + DF + ++  P     +  RG  RA +G+   AI D S+ L         L+ RG
Sbjct: 249 LRGTMEDFDKFVEMEPRNAMGYNNRGILRAEIGDLDGAIDDFSRVLALRGEDLPTLYYRG 308

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           ++  +  +F  A+ D +       +    Y        ++G+ K A+  +  A++++ + 
Sbjct: 309 MLYKEKGEFRKALSDFNIVADAYPDFAPVYYNRAEVKQALGQTKAAQLDYNTAMKIEMDR 368

Query: 551 LEAWGHLT 558
            E  G  T
Sbjct: 369 REKIGEST 376



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 41/82 (50%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y   I   +++++ +P +  A    G   +  R  E A+  +++AI+ N    EA+  RG
Sbjct: 602 YNMIIDDLEKVVEIEPDFEFAWFNLGYMSSVLRNFEEAVEFYSKAIEKNSDFAEAYFNRG 661

Query: 457 QARAALGESVEAIQDLSKALEF 478
             R  LG++ E   DLSKA E 
Sbjct: 662 LVRIFLGKTSEGTLDLSKAGEL 683



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 10/141 (7%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L+ RG        L  A+ +F + I+ NP    A   R   R  + +SV+ + +  K  +
Sbjct: 523 LMERGLLYMDVLNLNNALDNFNQVIRINPDYYIARFARAFTRYKMVQSVKEM-NTGKIPD 581

Query: 478 FEP----NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
            +P     + D L ++ I+     D+N  ++DL   V+++ + + A+  LG   S +  +
Sbjct: 582 EDPLAVSGAGDELSQQAIL-----DYNMIIDDLEKVVEIEPDFEFAWFNLGYMSSVLRNF 636

Query: 534 KKAEEAHLKAIQLDRNFLEAW 554
           ++A E + KAI+ + +F EA+
Sbjct: 637 EEAVEFYSKAIEKNSDFAEAY 657


>gi|427715955|ref|YP_007063949.1| hypothetical protein Cal7507_0626 [Calothrix sp. PCC 7507]
 gi|427348391|gb|AFY31115.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 1174

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 2/285 (0%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGK--YASAISIFDQILKEDPMYPEALIGRGTARA 426
             T +  + ++   F  + GI  + E K  + +     + I +E    P      G  + 
Sbjct: 150 LFTLLQNNNNVVHPFIQNLGITTIPEVKTNFPALTYQINNIAQEIENIPTTWFDLGVKQT 209

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
              + E AIS + +A++  P   EAW  RG A + L  + EAI    K L  +P+     
Sbjct: 210 MIGDFEGAISSYDKALEIKPGYYEAWYLRGYALSNLKRNEEAIASFDKVLAIQPDYYAAW 269

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + +G      K +  A+      +K+D +N  A+   G  L  +GEY+KA  ++ KA QL
Sbjct: 270 NRKGAALDHLKRYEDAIASFDQAIKIDPDNHEAWHNKGNMLDKLGEYEKALISYDKAQQL 329

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           D +    W         L   E+A+    + L I      A+  RG  L  LG++++A+ 
Sbjct: 330 DSSCYSGWNARGVTLTSLGRDEEAILSCDKALAIQPNDHLAWFNRGNALVNLGRYEEALT 389

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
             +  L I+P+  +    R +    +G Y EAI  YD AL+++ D
Sbjct: 390 SSNKALEIEPNFHQAWDNRGTALRNLGCYEEAILSYDKALEIQPD 434



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 144/341 (42%), Gaps = 27/341 (7%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A  N  +   AI+ FD++L   P Y  A   +G A    +  E AI+ F +AI+ +P
Sbjct: 238 RGYALSNLKRNEEAIASFDKVLAIQPDYYAAWNRKGAALDHLKRYEDAIASFDQAIKIDP 297

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EAW  +G     LGE  +A+    KA + + +     + RG+          A+   
Sbjct: 298 DNHEAWHNKGNMLDKLGEYEKALISYDKAQQLDSSCYSGWNARGVTLTSLGRDEEAILSC 357

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + +   +  A+   G AL ++G Y++A  +  KA++++ NF +AW +     ++L  
Sbjct: 358 DKALAIQPNDHLAWFNRGNALVNLGRYEEALTSSNKALEIEPNFHQAWDNRGTALRNLGC 417

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+    + L I   + + +  RG+ L  LG++++AI   S  L I P        R 
Sbjct: 418 YEEAILSYDKALEIQPDYHQVWDNRGIALGNLGRYEEAILSSSKALEIQPDFHYAWNNRG 477

Query: 627 SCYHAIGEYREAIKDYDAALD----------------LELDSMEKFVLQC---------- 660
                +G + EAI  YD A++                L L   E+ +L C          
Sbjct: 478 FALGNLGCHEEAILSYDKAIEIQPNFHLAWNNRGNTLLNLGRYEEAILSCDKALEIQPDF 537

Query: 661 -LAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
             A Y + IAL    +       +D    I P  ++ W  R
Sbjct: 538 HPALYNRGIALLNLGRYEEAILSYDKALAIQPDIQQAWNNR 578



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 123/264 (46%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ Q   G +  AIS +D+ L+  P Y EA   RG A +  +  E AI+ F + +   P 
Sbjct: 205 GVKQTMIGDFEGAISSYDKALEIKPGYYEAWYLRGYALSNLKRNEEAIASFDKVLAIQPD 264

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              AW R+G A   L    +AI    +A++ +P++ +  H +G +  K  ++  A+    
Sbjct: 265 YYAAWNRKGAALDHLKRYEDAIASFDQAIKIDPDNHEAWHNKGNMLDKLGEYEKALISYD 324

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
              +LD    S +   G+ L+S+G  ++A  +  KA+ +  N   AW +      +L   
Sbjct: 325 KAQQLDSSCYSGWNARGVTLTSLGRDEEAILSCDKALAIQPNDHLAWFNRGNALVNLGRY 384

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+AL    + L I+  F +A+  RG  L  LG +++AI      L I P   +    R  
Sbjct: 385 EEALTSSNKALEIEPNFHQAWDNRGTALRNLGCYEEAILSYDKALEIQPDYHQVWDNRGI 444

Query: 628 CYHAIGEYREAIKDYDAALDLELD 651
               +G Y EAI     AL+++ D
Sbjct: 445 ALGNLGRYEEAILSSSKALEIQPD 468



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 142/328 (43%), Gaps = 42/328 (12%)

Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDP------- 412
           KRN++  +    K  +I  D+  +   +G A  +  +Y  AI+ FDQ +K DP       
Sbjct: 246 KRNEE-AIASFDKVLAIQPDYYAAWNRKGAALDHLKRYEDAIASFDQAIKIDPDNHEAWH 304

Query: 413 ----------MYPEALI-----------------GRG-TARAFQRELEAAIS-DFTEAIQ 443
                      Y +ALI                  RG T  +  R+ EA +S D   AIQ
Sbjct: 305 NKGNMLDKLGEYEKALISYDKAQQLDSSCYSGWNARGVTLTSLGRDEEAILSCDKALAIQ 364

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
             P+   AW  RG A   LG   EA+   +KALE EPN       RG        +  A+
Sbjct: 365 --PNDHLAWFNRGNALVNLGRYEEALTSSNKALEIEPNFHQAWDNRGTALRNLGCYEEAI 422

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                 +++  +    +   G+AL ++G Y++A  +  KA+++  +F  AW +      +
Sbjct: 423 LSYDKALEIQPDYHQVWDNRGIALGNLGRYEEAILSSSKALEIQPDFHYAWNNRGFALGN 482

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   E+A+    + + I   F  A++ RG  L  LG++++AI      L I P     LY
Sbjct: 483 LGCHEEAILSYDKAIEIQPNFHLAWNNRGNTLLNLGRYEEAILSCDKALEIQPDFHPALY 542

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            R      +G Y EAI  YD AL ++ D
Sbjct: 543 NRGIALLNLGRYEEAILSYDKALAIQPD 570



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 3/189 (1%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +T  +K+  I  +F  +   RG A  N G Y  AI  +D+ L+  P Y +    RG A 
Sbjct: 387 ALTSSNKALEIEPNFHQAWDNRGTALRNLGCYEEAILSYDKALEIQPDYHQVWDNRGIAL 446

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                 E AI   ++A++  P    AW  RG A   LG   EAI    KA+E +PN    
Sbjct: 447 GNLGRYEEAILSSSKALEIQPDFHYAWNNRGFALGNLGCHEEAILSYDKAIEIQPNFHLA 506

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG        +  A+      +++  +   A    G+AL ++G Y++A  ++ KA+ 
Sbjct: 507 WNNRGNTLLNLGRYEEAILSCDKALEIQPDFHPALYNRGIALLNLGRYEEAILSYDKALA 566

Query: 546 LDRNFLEAW 554
           +  +  +AW
Sbjct: 567 IQPDIQQAW 575



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 63/141 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G+Y  AI    + L+  P +  A   RG A       E AI  + +AI+  
Sbjct: 441 NRGIALGNLGRYEEAILSSSKALEIQPDFHYAWNNRGFALGNLGCHEEAILSYDKAIEIQ 500

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   AW  RG     LG   EAI    KALE +P+    L+ RGI       +  A+  
Sbjct: 501 PNFHLAWNNRGNTLLNLGRYEEAILSCDKALEIQPDFHPALYNRGIALLNLGRYEEAILS 560

Query: 506 LSACVKLDKENKSAYTYLGLA 526
               + +  + + A+   G+A
Sbjct: 561 YDKALAIQPDIQQAWNNRGIA 581


>gi|300870878|ref|YP_003785749.1| hypothetical protein BP951000_1259 [Brachyspira pilosicoli 95/1000]
 gi|300688577|gb|ADK31248.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 233

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 99/189 (52%), Gaps = 5/189 (2%)

Query: 367 KFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           K+    +  +KSI +D   S     RG  + + G+Y  AI  +D  ++ D  Y  A   R
Sbjct: 28  KYEEAIVYYNKSIELDNNYSVAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNR 87

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G A+ +  E E AI D+ +AI+ +    +A+  RG  +  LG+  EA++D +K +E  PN
Sbjct: 88  GLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNILGKYEEAVKDFNKVIELNPN 147

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            +D  + RG V      +  A++D    ++L+  N + Y   G++  ++ EY +A + + 
Sbjct: 148 DSDAYYNRGTVKDVLGQYEEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKDYK 207

Query: 542 KAIQLDRNF 550
           KA++LD N+
Sbjct: 208 KALELDPNY 216



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 102/187 (54%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G+  EAI   +K++E + N +   + RG V     ++  A++D    ++LD     AY  
Sbjct: 27  GKYEEAIVYYNKSIELDNNYSVAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNN 86

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            GLA   +GEY++A + + KAI+LD ++ +A+ +       L   E+A++   +V+ ++ 
Sbjct: 87  RGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNILGKYEEAVKDFNKVIELNP 146

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
             S AY+ RG +   LGQ+++AIKD    + ++P+N      R      + EY EA+KDY
Sbjct: 147 NDSDAYYNRGTVKDVLGQYEEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKDY 206

Query: 643 DAALDLE 649
             AL+L+
Sbjct: 207 KKALELD 213



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +++++ KAI  LDS  + +Y      NR    + L  ++  ++D +K ++L+P    AY 
Sbjct: 100 AIKDYDKAIE-LDSDYSDAY-----NNRGIVKNILGKYEEAVKDFNKVIELNPNDSDAYY 153

Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
            +G     LG+ EEA+  ++K  E
Sbjct: 154 NRGTVKDVLGQYEEAIKDYDKAIE 177


>gi|67923599|ref|ZP_00517071.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
 gi|67854569|gb|EAM49856.1| TPR repeat:TPR repeat [Crocosphaera watsonii WH 8501]
          Length = 1115

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 1/279 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + + + Q   G+Y  A++   +I ++ P   +     G      ++ E AI+ + +A+Q 
Sbjct: 160 IDQAVEQYQRGEYQEAVNTVVEITQQYPNDYQGWYYLGELMGTFQQYEQAIASYDKALQL 219

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    AW  RG A   LG   E I    KAL+ +P+     + RG        ++ A+ 
Sbjct: 220 KPDYHPAWVNRGVALYELGRLDEEIASYDKALQLKPDDDVAWNNRGYALGNLGRWDEAIA 279

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD- 563
                ++L  +   A+   G+AL ++G + +A  ++ KA+QL  ++  AW H      D 
Sbjct: 280 SYDKALQLKPDKDEAWYNRGIALFNLGRWDEAIASYDKALQLKPDYHPAWDHRGIILCDN 339

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   E+A+   ++ L I   +  A+H RG+ L  L +  + I      L + P   +  Y
Sbjct: 340 LGRFEEAITSFEKALEIKPDYYSAWHNRGVALSNLQRFNEDIASYDKALQLKPDLHQAWY 399

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            R +    +    EAI  YD AL L+ D  E +  + LA
Sbjct: 400 YRGNTLGNLRRLDEAIASYDKALQLKPDFPEAWYHRGLA 438


>gi|429124499|ref|ZP_19185031.1| hypothetical protein A966_09454 [Brachyspira hampsonii 30446]
 gi|426279738|gb|EKV56759.1| hypothetical protein A966_09454 [Brachyspira hampsonii 30446]
          Length = 422

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 39/314 (12%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+++   G +  AI+ + + +  D  Y E    R          EAAI D+ + I+  P+
Sbjct: 41  GLSKQALGFFEEAINYYSKGIDIDENYGELYYNRANCECNLGFYEAAIKDYDKVIELVPT 100

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+  RG A+  LG   +A++D+ KA+  + N+ D   +R  +    K +  A+ED  
Sbjct: 101 HSRAYNDRGFAKGNLGLYEDALKDIDKAIVLDSNNVDSYIDRAFIKLMSKKYIEAIEDYK 160

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--------------------- 546
             ++LD     AY  +G A   +G Y++A   + K I+L                     
Sbjct: 161 KALELDDTEVYAYNGIGDAKRGMGLYEEAISYYKKVIELSNSSYAYNNIGACKIGLGLYK 220

Query: 547 ----DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK----------AYHLR 591
               D N  LE +   T  Y +   ++  LE  +  +   K F K          AY+ R
Sbjct: 221 DAIIDINKALEIYDEYTDAYNNRGTAKYNLELYEDAI---KDFDKAIELYPQYFYAYNNR 277

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G     LG ++ A++D S  + I+P  I+  Y RA   + +G + EA+KDYD  ++L+ +
Sbjct: 278 GNAKSALGLYEDALEDFSKSINIEPKYIDAYYNRAIVKNNMGLHNEAVKDYDIVIELDNN 337

Query: 652 SMEKFVLQCLAFYQ 665
           ++  +  + L++Y 
Sbjct: 338 NINAYYNRGLSYYN 351



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 134/273 (49%), Gaps = 3/273 (1%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S +VD  + R   ++   KY  AI  + + L+ D     A  G G A+      E AIS 
Sbjct: 133 SNNVDSYIDRAFIKLMSKKYIEAIEDYKKALELDDTEVYAYNGIGDAKRGMGLYEEAISY 192

Query: 438 FTEAIQ-SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           + + I+ SN S   A+   G  +  LG   +AI D++KALE      D  + RG   +  
Sbjct: 193 YKKVIELSNSSY--AYNNIGACKIGLGLYKDAIIDINKALEIYDEYTDAYNNRGTAKYNL 250

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           + +  A++D    ++L  +   AY   G A S++G Y+ A E   K+I ++  +++A+ +
Sbjct: 251 ELYEDAIKDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDFSKSINIEPKYIDAYYN 310

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                 ++    +A++    V+ +D     AY+ RGL  + L  ++KA+KD    + ++P
Sbjct: 311 RAIVKNNMGLHNEAVKDYDIVIELDNNNINAYYNRGLSYYNLADYEKALKDYDRVMELNP 370

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
              +    R    +++G Y EAI DYD A++++
Sbjct: 371 KLADAYNNRGFTKYSMGLYEEAINDYDKAIEID 403



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 34/230 (14%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G  ++  G Y  AI   ++ L+    Y +A   RGTA+      E AI DF +AI+  P 
Sbjct: 210 GACKIGLGLYKDAIIDINKALEIYDEYTDAYNNRGTAKYNLELYEDAIKDFDKAIELYPQ 269

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+  RG A++ALG   +A++D SK++  EP   D  + R IV       N AV+D  
Sbjct: 270 YFYAYNNRGNAKSALGLYEDALEDFSKSINIEPKYIDAYYNRAIVKNNMGLHNEAVKDYD 329

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++LD  N +AY   GL+  ++ +Y                                  
Sbjct: 330 IVIELDNNNINAYYNRGLSYYNLADY---------------------------------- 355

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
           EKAL+   +V+ ++ + + AY+ RG   + +G +++AI D    + ID +
Sbjct: 356 EKALKDYDRVMELNPKLADAYNNRGFTKYSMGLYEEAINDYDKAIEIDAN 405



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 87/168 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ N   Y  AI  FD+ ++  P Y  A   RG A++     E A+ DF+++I   
Sbjct: 242 NRGTAKYNLELYEDAIKDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDFSKSINIE 301

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  R   +  +G   EA++D    +E + N+ +  + RG+  +   D+  A++D
Sbjct: 302 PKYIDAYYNRAIVKNNMGLHNEAVKDYDIVIELDNNNINAYYNRGLSYYNLADYEKALKD 361

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
               ++L+ +   AY   G    S+G Y++A   + KAI++D N+ +A
Sbjct: 362 YDRVMELNPKLADAYNNRGFTKYSMGLYEEAINDYDKAIEIDANYEKA 409



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 2/184 (1%)

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           E G+  F+   F  A E     ++ D  N   Y YLGL+  ++G +++A   + K I +D
Sbjct: 5   EEGLQLFRETQFEKASELFIKALEEDCNNSEIYNYLGLSKQALGFFEEAINYYSKGIDID 64

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            N+ E + +      +L   E A++   +V+ +    S+AY+ RG     LG ++ A+KD
Sbjct: 65  ENYGELYYNRANCECNLGFYEAAIKDYDKVIELVPTHSRAYNDRGFAKGNLGLYEDALKD 124

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           +   + +D +N++    RA       +Y EAI+DY  A  LELD  E +    +   ++ 
Sbjct: 125 IDKAIVLDSNNVDSYIDRAFIKLMSKKYIEAIEDYKKA--LELDDTEVYAYNGIGDAKRG 182

Query: 668 IALY 671
           + LY
Sbjct: 183 MGLY 186



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 37/256 (14%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           + + E A   F +A++ + +  E +   G ++ ALG   EAI   SK ++ + N  ++ +
Sbjct: 13  ETQFEKASELFIKALEEDCNNSEIYNYLGLSKQALGFFEEAINYYSKGIDIDENYGELYY 72

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            R         + AA++D    ++L   +  AY   G A  ++G Y+ A +   KAI LD
Sbjct: 73  NRANCECNLGFYEAAIKDYDKVIELVPTHSRAYNDRGFAKGNLGLYEDALKDIDKAIVLD 132

Query: 548 RNFLEAWGHLTQFYQDLANSE--KALECLQQVLYIDKRFSKAYH-----LRGLLLH---- 596
            N ++++  + + +  L + +  +A+E  ++ L +D     AY+      RG+ L+    
Sbjct: 133 SNNVDSY--IDRAFIKLMSKKYIEAIEDYKKALELDDTEVYAYNGIGDAKRGMGLYEEAI 190

Query: 597 ------------------------GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
                                   GLG +K AI D++  L I     +    R +  + +
Sbjct: 191 SYYKKVIELSNSSYAYNNIGACKIGLGLYKDAIIDINKALEIYDEYTDAYNNRGTAKYNL 250

Query: 633 GEYREAIKDYDAALDL 648
             Y +AIKD+D A++L
Sbjct: 251 ELYEDAIKDFDKAIEL 266



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 9/100 (9%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG---- 129
           NR      LEL++  I+D DKA++L P    AY  +G A SALG  E+AL  + K     
Sbjct: 242 NRGTAKYNLELYEDAIKDFDKAIELYPQYFYAYNNRGNAKSALGLYEDALEDFSKSINIE 301

Query: 130 --YEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
             Y  A +  A +K  + L      A +D  +  E D +N
Sbjct: 302 PKYIDAYYNRAIVKNNMGLH---NEAVKDYDIVIELDNNN 338



 Score = 44.3 bits (103), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 28/148 (18%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +L ++SK+I I    +   Y      NRA   + + LH   ++D D  ++LD   + AY 
Sbjct: 290 ALEDFSKSINIEPKYIDAYY------NRAIVKNNMGLHNEAVKDYDIVIELDNNNINAYY 343

Query: 108 LKGCAFSALGRKEEALSVWEKGYEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSN 167
            +G ++  L   E+AL               D  + +EL   L  A  +R  T       
Sbjct: 344 NRGLSYYNLADYEKALK--------------DYDRVMELNPKLADAYNNRGFT------- 382

Query: 168 SMSSLTVSESGLNANDKMSETSENHNKS 195
              S+ + E  +N  DK  E   N+ K+
Sbjct: 383 -KYSMGLYEEAINDYDKAIEIDANYEKA 409


>gi|423344485|ref|ZP_17322197.1| hypothetical protein HMPREF1077_03627 [Parabacteroides johnsonii
           CL02T12C29]
 gi|409212883|gb|EKN05917.1| hypothetical protein HMPREF1077_03627 [Parabacteroides johnsonii
           CL02T12C29]
          Length = 707

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 7/318 (2%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           F +  ++    I+ D  L+ G   +    Y  +I  F+Q++K  P   E    R  A+  
Sbjct: 10  FQLCSLAMFAQINTDRVLTIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKIN 69

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
             + + A  D T  ++ NP   +A+  RG AR +  +  EAI+D  K LEF+     +L 
Sbjct: 70  LDDYKGAEEDCTLCLERNPFLVQAYYARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLV 129

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
              + N + KDF  A +     +    +    Y   G   +  G+  KA   + KAI +D
Sbjct: 130 NMAVANIQKKDFKEAEKVFDELMVAHPKYSMNYLTRGAMYTEKGDTVKALADYDKAISMD 189

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
             +  A+G+    +  + N + AL  L + + ++ R S  Y  RGL+ + L   + A+ D
Sbjct: 190 PYYAPAYGNRAILHYQMNNMKDALADLNEAIRLNTRESGYYINRGLVRYQLKDLRGAMAD 249

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
               + +D  N+   + R      IG+   AI+D+D  +++E D+        +A+Y + 
Sbjct: 250 YDQVVSMDSHNLIARFNRGLLRAQIGDNNRAIEDFDVVIEIEPDN-------YMAYYNRA 302

Query: 668 IALYTASKINSEFCWFDI 685
           +  Y           FD+
Sbjct: 303 LLRYETGDYQGSVHDFDV 320



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 113/261 (43%), Gaps = 34/261 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+ ++ K+  AI  + + L+      + L+    A   +++ + A   F E + ++
Sbjct: 96  ARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLVNMAVANIQKKDFKEAEKVFDELMVAH 155

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG      G++V+A+ D  KA+  +P  A     R I++++  +   A+ D
Sbjct: 156 PKYSMNYLTRGAMYTEKGDTVKALADYDKAISMDPYYAPAYGNRAILHYQMNNMKDALAD 215

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L+  ++L+      Y   GL    + + + A   + + + +D + L A            
Sbjct: 216 LNEAIRLNTRESGYYINRGLVRYQLKDLRGAMADYDQVVSMDSHNLIA------------ 263

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
                            RF+     RGLL   +G + +AI+D    + I+P N    Y R
Sbjct: 264 -----------------RFN-----RGLLRAQIGDNNRAIEDFDVVIEIEPDNYMAYYNR 301

Query: 626 ASCYHAIGEYREAIKDYDAAL 646
           A   +  G+Y+ ++ D+D  L
Sbjct: 302 ALLRYETGDYQGSVHDFDVVL 322



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 106/265 (40%), Gaps = 34/265 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++  +A + +  +  A  +FD+++   P Y    + RG     + +   A++D+ +AI  
Sbjct: 129 VNMAVANIQKKDFKEAEKVFDELMVAHPKYSMNYLTRGAMYTEKGDTVKALADYDKAISM 188

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+  R      +    +A+ DL++A+      +     RG+V ++ KD   A+ 
Sbjct: 189 DPYYAPAYGNRAILHYQMNNMKDALADLNEAIRLNTRESGYYINRGLVRYQLKDLRGAMA 248

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    V +D  N  A    GL  + IG+                                
Sbjct: 249 DYDQVVSMDSHNLIARFNRGLLRAQIGD-------------------------------- 276

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             + +A+E    V+ I+     AY+ R LL +  G ++ ++ D    L   P+ +   Y 
Sbjct: 277 --NNRAIEDFDVVIEIEPDNYMAYYNRALLRYETGDYQGSVHDFDVVLRQYPNFVAGYYS 334

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           RA     + +   A +DY  A ++E
Sbjct: 335 RAEVKRKMHDEVGADRDYWTAYNME 359



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +D ++K +P +  A   RG  R  QR+  AAI D++EAIQ +P   EA+  RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAEAYFNRGLARLSQG 677

Query: 464 ESVEAIQDLSKALEF 478
           ++   I DLSKA E 
Sbjct: 678 DANRGIADLSKAGEL 692



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 24/203 (11%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           A+I +F+  I  NP+  +A+  R      + +  EAI+D +K +E  P+ A     R +V
Sbjct: 495 ASIDNFSARIVKNPNDVDAYFGRALDFMLVQDFTEAIKDYTKVIELNPDFAMAYFNRAVV 554

Query: 493 NFKFKDFN-----AAVEDLSACVKLDKENKSAYTYLGLALS-----SIGEYKKAEEAHL- 541
            +K  D+N     ++ +D SA     K  K+       A S     S+ + K+A E  + 
Sbjct: 555 RYKQLDYNMSQAASSQDDFSAMSMNLKMGKNPTVVRTPATSDPASASLKDNKRAYEHEMI 614

Query: 542 -----KAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
                  I+L+  F+ A+   G+L    +D      A++   + +  D  F++AY  RGL
Sbjct: 615 TRDYDMVIKLNPGFVYAYFNRGNLRCAQRDF---RAAIQDYSEAIQRDPEFAEAYFNRGL 671

Query: 594 LLHGLGQHKKAIKDLSSG--LGI 614
                G   + I DLS    LGI
Sbjct: 672 ARLSQGDANRGIADLSKAGELGI 694



 Score = 44.3 bits (103), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           RA++ E+     D+   I+ NP    A+  RG  R A  +   AIQD S+A++ +P  A+
Sbjct: 607 RAYEHEM--ITRDYDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAE 664

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
               RG+      D N  + DLS   +L
Sbjct: 665 AYFNRGLARLSQGDANRGIADLSKAGEL 692



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 64/335 (19%), Positives = 121/335 (36%), Gaps = 53/335 (15%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + ++RG+ +        A++ +DQ++  D     A   RG  RA   +   AI DF   I
Sbjct: 229 YYINRGLVRYQLKDLRGAMADYDQVVSMDSHNLIARFNRGLLRAQIGDNNRAIEDFDVVI 288

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +  P    A+  R   R   G+   ++ D    L   PN     + R  V  K  D   A
Sbjct: 289 EIEPDNYMAYYNRALLRYETGDYQGSVHDFDVVLRQYPNFVAGYYSRAEVKRKMHDEVGA 348

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIG------------------------------- 531
             D      ++++ K+         S  G                               
Sbjct: 349 DRDYWTAYNMEQKKKNGNASGNAVASQNGNNTGTQSADPASKDENTREQSDKNIDKFNRL 408

Query: 532 ------EYKKAE-EAHLKAIQLDRNF---LEAWGHLTQF-----YQDLANSEKALECLQQ 576
                 E +K +  + ++    DRN    LE    LT +      + L   +K +E    
Sbjct: 409 VVYDEEEVRKTKYNSEIRGRVQDRNVRVDLEPMFVLTYYEKVDPVKKLVYYDKMVEAYNS 468

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L ++++         L    +  H  +I + S+ +  +P++++  + RA  +  + ++ 
Sbjct: 469 RLVLERKLRITNEEAALTEDQVAVHFASIDNFSARIVKNPNDVDAYFGRALDFMLVQDFT 528

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           EAIKDY   ++L  D         +A++ + +  Y
Sbjct: 529 EAIKDYTKVIELNPDF-------AMAYFNRAVVRY 556


>gi|406831287|ref|ZP_11090881.1| peptidase C14 caspase catalytic subunit p20 [Schlesneria paludicola
           DSM 18645]
          Length = 423

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 129/277 (46%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I  S+  + +    RG AQ   G Y +AI+ F Q ++ +P   +A   RG A  ++ + +
Sbjct: 22  IGYSQYHTAESHYKRGTAQHERGDYEAAIAEFTQAIRSEPQNAQAYCVRGIAWHYKGDED 81

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI D+TEAI+ +P   +A+  R  A     +   A+ D +  L ++P + +  + RG++
Sbjct: 82  LAIDDYTEAIRIDPEYAQAYVGRANAWFDKLQFNLAVADYTSTLRYDPKNLEAYYSRGVI 141

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             +  + + A+ D  + V++D+ +   Y+  G A   +     A   + +AI+   N   
Sbjct: 142 RLEQNEMSDAIADFDSVVRIDRTHAPVYSRRGYAHGQLNALDAAFADYTEAIRRQPNDWL 201

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           ++ +     Q +     A+    + + +D +    Y+ RG     L +   A  DLS  +
Sbjct: 202 SYFNRGNVRQLVGEFRVAIRDYSRAIRLDPQLVVGYNNRGCAYAALEEIDSAEIDLSEAV 261

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            +DP      Y RA+     G++  AI+DY  AL L+
Sbjct: 262 RVDPQFSIGYYNRANLRCLRGDFDNAIRDYTEALHLD 298



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 106/232 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA   +G    AI  + + ++ DP Y +A +GR  A   + +   A++D+T  ++ +P
Sbjct: 70  RGIAWHYKGDEDLAIDDYTEAIRIDPEYAQAYVGRANAWFDKLQFNLAVADYTSTLRYDP 129

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EA+  RG  R    E  +AI D    +  +   A +   RG  + +    +AA  D 
Sbjct: 130 KNLEAYYSRGVIRLEQNEMSDAIADFDSVVRIDRTHAPVYSRRGYAHGQLNALDAAFADY 189

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++    +  +Y   G     +GE++ A   + +AI+LD   +  + +    Y  L  
Sbjct: 190 TEAIRRQPNDWLSYFNRGNVRQLVGEFRVAIRDYSRAIRLDPQLVVGYNNRGCAYAALEE 249

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            + A   L + + +D +FS  Y+ R  L    G    AI+D +  L +DP N
Sbjct: 250 IDSAEIDLSEAVRVDPQFSIGYYNRANLRCLRGDFDNAIRDYTEALHLDPKN 301



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 86/187 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+ ++ + + + AI+ FD +++ D  +      RG A      L+AA +D+TEAI+  
Sbjct: 137 SRGVIRLEQNEMSDAIADFDSVVRIDRTHAPVYSRRGYAHGQLNALDAAFADYTEAIRRQ 196

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   ++  RG  R  +GE   AI+D S+A+  +P      + RG      ++ ++A  D
Sbjct: 197 PNDWLSYFNRGNVRQLVGEFRVAIRDYSRAIRLDPQLVVGYNNRGCAYAALEEIDSAEID 256

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           LS  V++D +    Y          G++  A   + +A+ LD      W  L      L 
Sbjct: 257 LSEAVRVDPQFSIGYYNRANLRCLRGDFDNAIRDYTEALHLDPKNWLFWSRLAWLRATLP 316

Query: 566 NSEKALE 572
             +   E
Sbjct: 317 GDDSVYE 323


>gi|354567785|ref|ZP_08986953.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353542243|gb|EHC11707.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 310

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/277 (23%), Positives = 126/277 (45%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           ++  +F   +G+ +    ++  AI+  D  L+  P YPEA   +G A       E AI+ 
Sbjct: 10  NLEAEFFFQQGLRRNRVQEFEVAIANLDTALRCKPDYPEAWFQKGFALGSLGRHEDAIAC 69

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           F E ++   +    W  R  A   L    EA+ +  +A+EF PN+A I H RG+     +
Sbjct: 70  FDEMLKLRSNDSWVWHNRAIALGKLERHQEALDNFDRAIEFNPNAATIWHNRGLTLCDLQ 129

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
            +  A+   + C+KL  +   A+   G A   +  Y++A  ++ +AI+   + + AW + 
Sbjct: 130 QYQQAIVSFNQCLKLQPDAYWAWNNKGNAQRELRRYEEALNSYDRAIEFHVDNVMAWFNR 189

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                +  + +KA++   + L I   + KA+  +G+    +  + +AI   +    + P+
Sbjct: 190 GVTLNEWKHYQKAIKSFDRTLSIQPNYYKAWLNKGIAWEHIENYDEAIASYNQAAKLQPN 249

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           +    Y  A CY        A+ + + A+ L  + +E
Sbjct: 250 DPVIWYNTARCYAQKHNIPVAVANLEQAISLCPEYLE 286



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/218 (19%), Positives = 93/218 (42%), Gaps = 7/218 (3%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           A+   ++G+   + ++F  A+ +L   ++   +   A+   G AL S+G ++ A     +
Sbjct: 13  AEFFFQQGLRRNRVQEFEVAIANLDTALRCKPDYPEAWFQKGFALGSLGRHEDAIACFDE 72

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
            ++L  N    W +       L   ++AL+   + +  +   +  +H RGL L  L Q++
Sbjct: 73  MLKLRSNDSWVWHNRAIALGKLERHQEALDNFDRAIEFNPNAATIWHNRGLTLCDLQQYQ 132

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           +AI   +  L + P        + +    +  Y EA+  YD A++  +D++       +A
Sbjct: 133 QAIVSFNQCLKLQPDAYWAWNNKGNAQRELRRYEEALNSYDRAIEFHVDNV-------MA 185

Query: 663 FYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           ++ + + L            FD    I P + + W  +
Sbjct: 186 WFNRGVTLNEWKHYQKAIKSFDRTLSIQPNYYKAWLNK 223


>gi|256839603|ref|ZP_05545112.1| TPR repeat-containing protein [Parabacteroides sp. D13]
 gi|256738533|gb|EEU51858.1| TPR repeat-containing protein [Parabacteroides sp. D13]
          Length = 707

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 128/289 (44%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           IS    I+ D  L+ G   +    Y  +I  F+Q++K  P   E    R  A+    + +
Sbjct: 15  ISLFAQINTDRVLAIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFK 74

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            A  D T  +Q NP   +A+  RG AR +  +  EAI D  K LEF+P    +L    + 
Sbjct: 75  GAEEDCTLCLQRNPFLTQAYYARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVA 134

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             + KD+N A +     +    +    Y   G      G+  KA   + KAI++D  +  
Sbjct: 135 FIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAP 194

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A+G+    +  + + + AL  L + L +D R S  Y  RGL+ + +   + A+ D    +
Sbjct: 195 AYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVI 254

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
            +D  N+   + R      +G+   AI+D+D  +  E D+   +  + L
Sbjct: 255 SMDRRNLIARFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRAL 303



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +D ++K +P +  A   R   R  QR+  AAI D+ EAI+ +P   EA+  RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 677

Query: 464 ESVEAIQDLSKALEF 478
           +    I DLSKA E 
Sbjct: 678 DVNRGIADLSKAGEL 692



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/170 (20%), Positives = 76/170 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG   + +G    A++ +++ ++ DP Y  A   R        + + A++D  EA++ 
Sbjct: 163 MTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNEALRL 222

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  RG  R  + +   A+ D  + +  +  +      RG++ F+  D N A+E
Sbjct: 223 DTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDRRNLIARFNRGLLRFQVGDNNRAIE 282

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    ++ + +N  AY    L     G+Y+ A + +   ++    FL  +
Sbjct: 283 DFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGF 332



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 39/83 (46%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E E  + D+   I+ NP    A+  R   R A  +   AI D ++A+E +P  A+  + R
Sbjct: 610 EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNR 669

Query: 490 GIVNFKFKDFNAAVEDLSACVKL 512
           G+      D N  + DLS   +L
Sbjct: 670 GLARLSQGDVNRGIADLSKAGEL 692



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 55/137 (40%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + ++RG+ +        A++ +DQ++  D     A   RG  R    +   AI DF   I
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVISMDRRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 288

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           Q  P    A+  R   R   G+   A+QD    L+  P        R     K  D   A
Sbjct: 289 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 348

Query: 503 VEDLSACVKLDKENKSA 519
             D  A +K++++ K+ 
Sbjct: 349 DRDYWAAIKMEEQAKNG 365



 Score = 40.0 bits (92), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 10/274 (3%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R +RG+ +   G    AI  FD +++++P    A   R   R    +   A+ D+   ++
Sbjct: 264 RFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLK 323

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA-A 502
             P+    +  R +A+  LG++V A +D   A++ E  + +    +   +      N  A
Sbjct: 324 QYPTFLPGFVSRSEAKRKLGDNVGADRDYWAAIKMEEQAKNGQLPKTSSSSSNTAVNGDA 383

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE-EAHLKAIQLDRNF---LEAWGHLT 558
             D S     ++ +K+   +  L +    + +K++ ++ ++    DRN    LE    LT
Sbjct: 384 KTDDSEENTREQSDKNINKFNRLVVYDKEQERKSKYQSEVRGRVQDRNVHVDLEPQFVLT 443

Query: 559 QF-----YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
            +      + L   +K +E     + + ++         L    +  H  +I + S+ + 
Sbjct: 444 YYEKADPVKKLVYYDKMVEDYNGQMVLKRKLRITNEEAALTEDQIAVHFASIDEYSAEIE 503

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            DP+N    + RA  +  + ++ EAIK++  A++
Sbjct: 504 RDPNNANAYFGRAMDFMLVQDFSEAIKNFSEAIE 537


>gi|440684784|ref|YP_007159579.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428681903|gb|AFZ60669.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 269

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 67/232 (28%), Positives = 108/232 (46%), Gaps = 13/232 (5%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           N G Y  AI  + Q +  +     + I RG AR+  ++ + AI DF +AI+ +P   +A+
Sbjct: 19  NSGDYQGAIENYSQAILLNSEDLTSYISRGVARSLTKDYQNAIEDFNQAIRLSPQYAQAY 78

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             RG ARAA+GE+  AI+D  +A++  P        RG  +F   ++  A+ED S   ++
Sbjct: 79  AERGIARAAIGENQTAIEDCHRAIQLNPQYVRAYFGRGAAHFYSGNYQGALEDFSLITRM 138

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----------GHLTQFYQ 562
           ++   S Y  LG+   S G   +  +   KA+ +D N + A+          G     + 
Sbjct: 139 ERSAISYYN-LGILQYSQGINSQVIKHLTKALDIDPNLMSAYYVRGNACYDLGDEQGAFA 197

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           D A ++         +Y +  F  A + RGL  H LG  + AI DL     I
Sbjct: 198 DFAEAKHIESVGADKIYFEDEF--ALYARGLAYHRLGNRENAIADLQESAQI 247



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 11/211 (5%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G+   AI++ S+A+            RG+     KD+  A+ED +  ++L  +   AY  
Sbjct: 21  GDYQGAIENYSQAILLNSEDLTSYISRGVARSLTKDYQNAIEDFNQAIRLSPQYAQAYAE 80

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQDLANSEKALECLQQVLYI 580
            G+A ++IGE + A E   +AIQL+  ++ A+       FY    N + ALE    +  +
Sbjct: 81  RGIARAAIGENQTAIEDCHRAIQLNPQYVRAYFGRGAAHFYS--GNYQGALEDFSLITRM 138

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           ++     Y+L G+L +  G + + IK L+  L IDP+ +   Y+R +  + +G+ + A  
Sbjct: 139 ERSAISYYNL-GILQYSQGINSQVIKHLTKALDIDPNLMSAYYVRGNACYDLGDEQGAFA 197

Query: 641 DYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           D+  A  +E    +K       +++ E ALY
Sbjct: 198 DFAEAKHIESVGADKI------YFEDEFALY 222



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 9/247 (3%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + + AI ++++AI  N     ++  RG AR+   +   AI+D ++A+   P  A    ER
Sbjct: 22  DYQGAIENYSQAILLNSEDLTSYISRGVARSLTKDYQNAIEDFNQAIRLSPQYAQAYAER 81

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           GI      +   A+ED    ++L+ +   AY   G A    G Y+ A E      +++R+
Sbjct: 82  GIARAAIGENQTAIEDCHRAIQLNPQYVRAYFGRGAAHFYSGNYQGALEDFSLITRMERS 141

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
            +  +      Y    NS+  ++ L + L ID     AY++RG   + LG  + A  D +
Sbjct: 142 AISYYNLGILQYSQGINSQ-VIKHLTKALDIDPNLMSAYYVRGNACYDLGDEQGAFADFA 200

Query: 610 SG-----LGIDPSNIE---CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
                  +G D    E    LY R   YH +G    AI D   +  + L        Q +
Sbjct: 201 EAKHIESVGADKIYFEDEFALYARGLAYHRLGNRENAIADLQESAQIALKHQNTIFHQKV 260

Query: 662 AFYQKEI 668
             +  EI
Sbjct: 261 INFMSEI 267



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 60/200 (30%), Positives = 92/200 (46%), Gaps = 9/200 (4%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +SRG+A+     Y +AI  F+Q ++  P Y +A   RG ARA   E + AI D   AIQ 
Sbjct: 45  ISRGVARSLTKDYQNAIEDFNQAIRLSPQYAQAYAERGIARAAIGENQTAIEDCHRAIQL 104

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A+  RG A    G    A++D S     E  SA   +  GI+ +     +  ++
Sbjct: 105 NPQYVRAYFGRGAAHFYSGNYQGALEDFSLITRME-RSAISYYNLGILQYSQGINSQVIK 163

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKK-----AEEAHLKAIQLDRNFLEAWGHLTQ 559
            L+  + +D    SAY   G A   +G+ +      AE  H++++  D+ + E    L  
Sbjct: 164 HLTKALDIDPNLMSAYYVRGNACYDLGDEQGAFADFAEAKHIESVGADKIYFEDEFALYA 223

Query: 560 ---FYQDLANSEKALECLQQ 576
               Y  L N E A+  LQ+
Sbjct: 224 RGLAYHRLGNRENAIADLQE 243



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 14/155 (9%)

Query: 519 AYTYLGLA--LSSIGEYKKAEEAHLKAIQLDRNFLEAW------GHLTQFYQDLANSEKA 570
           AY Y  LA  L + G+Y+ A E + +AI L+   L ++        LT+ YQ+      A
Sbjct: 7   AYGYSSLAYILYNSGDYQGAIENYSQAILLNSEDLTSYISRGVARSLTKDYQN------A 60

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           +E   Q + +  ++++AY  RG+    +G+++ AI+D    + ++P  +   + R + + 
Sbjct: 61  IEDFNQAIRLSPQYAQAYAERGIARAAIGENQTAIEDCHRAIQLNPQYVRAYFGRGAAHF 120

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
             G Y+ A++D+     +E  ++  + L  L + Q
Sbjct: 121 YSGNYQGALEDFSLITRMERSAISYYNLGILQYSQ 155


>gi|428302097|ref|YP_007140403.1| hypothetical protein Cal6303_5553 [Calothrix sp. PCC 6303]
 gi|428238641|gb|AFZ04431.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 211

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 11/192 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  + + G    AI  F+Q +K +P Y EA   RG AR    + + AI+D+T+AI+ N
Sbjct: 27  NRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNNRGFARYELGDKQGAITDYTQAIKIN 86

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+  RG AR+ LG+   A+ D ++A++  PN A+  + RG+V  K  D   A+ D
Sbjct: 87  PNDAEAYSNRGIARSELGDKQGALADFNQAIKINPNDAEAYNNRGVVRSKLGDKQGAITD 146

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K++     AY   G+  S +G+ + A +   KA           G L +   D A
Sbjct: 147 YTQAIKINPNLAQAYNNRGVVRSELGDQQGAIQDFQKA-----------GELLKQQGDNA 195

Query: 566 NSEKALECLQQV 577
             E+ ++ ++Q+
Sbjct: 196 KYERVMKLIEQI 207



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 51/177 (28%), Positives = 97/177 (54%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AI+D+ +AI+ NP+   A+  RG  R+ LG+   AI D ++A++  PN A+  + RG 
Sbjct: 5   QGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNNRGF 64

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             ++  D   A+ D +  +K++  +  AY+  G+A S +G+ + A     +AI+++ N  
Sbjct: 65  ARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKINPNDA 124

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           EA+ +       L + + A+    Q + I+   ++AY+ RG++   LG  + AI+D 
Sbjct: 125 EAYNNRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAIQDF 181



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 53/182 (29%), Positives = 97/182 (53%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G    AI+ ++Q +K +P    A   RG+ R+   + + AI DF +AI+ NP+  EA+  
Sbjct: 2   GDKQGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYNN 61

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG AR  LG+   AI D ++A++  PN A+    RGI   +  D   A+ D +  +K++ 
Sbjct: 62  RGFARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKINP 121

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +  AY   G+  S +G+ + A   + +AI+++ N  +A+ +      +L + + A++  
Sbjct: 122 NDAEAYNNRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAIQDF 181

Query: 575 QQ 576
           Q+
Sbjct: 182 QK 183



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 91/187 (48%)

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           +G+   AI D ++A++  PN     + RG       D   A+ D +  +K++     AY 
Sbjct: 1   MGDKQGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYN 60

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G A   +G+ + A   + +AI+++ N  EA+ +      +L + + AL    Q + I+
Sbjct: 61  NRGFARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKIN 120

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
              ++AY+ RG++   LG  + AI D +  + I+P+  +    R      +G+ + AI+D
Sbjct: 121 PNDAEAYNNRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAIQD 180

Query: 642 YDAALDL 648
           +  A +L
Sbjct: 181 FQKAGEL 187



 Score = 50.1 bits (118), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +G+ + A   + +AI+++ N   A+ +      DL + ++A+    Q + I+  +++AY+
Sbjct: 1   MGDKQGAIADYNQAIKINPNLDVAYYNRGSTRSDLGDKQRAIIDFNQAIKINPNYAEAYN 60

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            RG   + LG  + AI D +  + I+P++ E    R      +G+ + A+ D++ A+ + 
Sbjct: 61  NRGFARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKIN 120

Query: 650 LDSMEKF-----VLQCLAFYQKEIALYT-ASKIN 677
            +  E +     V   L   Q  I  YT A KIN
Sbjct: 121 PNDAEAYNNRGVVRSKLGDKQGAITDYTQAIKIN 154



 Score = 41.2 bits (95), Expect = 3.2,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 12/154 (7%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASAIT----ARIELA-KLCSLRNWSKAIRILDSLL 63
           +RY L      I +  + ++++   A A +    AR EL  K  +L ++++AI+I +   
Sbjct: 65  ARYELGDKQGAITDYTQAIKINPNDAEAYSNRGIARSELGDKQGALADFNQAIKI-NPND 123

Query: 64  AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           A++Y      NR    S+L   +  I D  +A++++P L QAY  +G   S LG ++ A+
Sbjct: 124 AEAYN-----NRGVVRSKLGDKQGAITDYTQAIKINPNLAQAYNNRGVVRSELGDQQGAI 178

Query: 124 SVWEKGYEHALHQSADLKQFLELEELLTAAKQDR 157
             ++K  E  L Q  D  ++  + +L+   +  R
Sbjct: 179 QDFQKAGE-LLKQQGDNAKYERVMKLIEQIQNLR 211


>gi|298375300|ref|ZP_06985257.1| TPR domain protein [Bacteroides sp. 3_1_19]
 gi|298267800|gb|EFI09456.1| TPR domain protein [Bacteroides sp. 3_1_19]
          Length = 681

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 119/265 (44%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++K  P   E    R  A+    + + A  D T  +Q NP   +A+  RG
Sbjct: 13  YVLSIQYFNQVIKSKPWLAEPYFYRAVAKINLDDFKGAEEDCTLCLQRNPFLTQAYYARG 72

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR +  +  EAI D  K LEF+P    +L    +   + KD+N A +     +    + 
Sbjct: 73  IARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAHPKY 132

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
              Y   G      G+  KA   + KAI++D  +  A+G+    +  + + + AL  L +
Sbjct: 133 SMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALADLNE 192

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L +D R S  Y  RGL+ + +   + A+ D    + +D  N+   + R      +G+  
Sbjct: 193 ALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNN 252

Query: 637 EAIKDYDAALDLELDSMEKFVLQCL 661
            AI+D+D  +  E D+   +  + L
Sbjct: 253 RAIEDFDVVIQQEPDNYMAYYNRAL 277



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 36/262 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+ ++ KY  AI  + + L+  P   + L+    A   +++   A   F + + ++
Sbjct: 70  ARGIARQSQEKYDEAIDDYQKGLEFKPEDRQMLVNMAVAFIQKKDYNGAEKTFDDLMTAH 129

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG      G++++A+ D +KA+E +P  A     R I++++  D+  A+ D
Sbjct: 130 PKYSMNYMTRGAMYLEKGDTLKALADYNKAIEMDPYYAPAYGNRAILHYQMDDYKDALAD 189

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDL 564
           L+  ++LD      Y   GL    + + + A   + + I +D RN +             
Sbjct: 190 LNEALRLDTRESGYYINRGLVRYQMNDLRGAMADYDQVISMDSRNLI------------- 236

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
                             RF+     RGLL   +G + +AI+D    +  +P N    Y 
Sbjct: 237 -----------------ARFN-----RGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYN 274

Query: 625 RASCYHAIGEYREAIKDYDAAL 646
           RA      G+YR A++DYD  L
Sbjct: 275 RALLRFETGDYRGAVQDYDVVL 296



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/265 (20%), Positives = 105/265 (39%), Gaps = 34/265 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++  +A + +  Y  A   FD ++   P Y    + RG     + +   A++D+ +AI+ 
Sbjct: 103 VNMAVAFIQKKDYNGAEKTFDDLMTAHPKYSMNYMTRGAMYLEKGDTLKALADYNKAIEM 162

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P    A+  R      + +  +A+ DL++AL  +   +     RG+V ++  D   A+ 
Sbjct: 163 DPYYAPAYGNRAILHYQMDDYKDALADLNEALRLDTRESGYYINRGLVRYQMNDLRGAMA 222

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    + +D  N  A    GL    +G+                                
Sbjct: 223 DYDQVISMDSRNLIARFNRGLLRFQVGD-------------------------------- 250

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             + +A+E    V+  +     AY+ R LL    G ++ A++D    L   P+ +     
Sbjct: 251 --NNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVS 308

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           R+     +G+   A +DY AA+ +E
Sbjct: 309 RSEAKRKLGDNVGADRDYWAAIKME 333



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 42/75 (56%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +D ++K +P +  A   R   R  QR+  AAI D+ EAI+ +P   EA+  RG AR + G
Sbjct: 592 YDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAEAYYNRGLARLSQG 651

Query: 464 ESVEAIQDLSKALEF 478
           +    I DLSKA E 
Sbjct: 652 DVNRGIADLSKAGEL 666



 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           RA+  E E  + D+   I+ NP    A+  R   R A  +   AI D ++A+E +P  A+
Sbjct: 581 RAY--EHEQIMRDYDMVIKLNPGFVYAYFNRANLRCAQRDFRAAIVDYNEAIERDPEFAE 638

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
             + RG+      D N  + DLS   +L
Sbjct: 639 AYYNRGLARLSQGDVNRGIADLSKAGEL 666



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 55/137 (40%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + ++RG+ +        A++ +DQ++  D     A   RG  R    +   AI DF   I
Sbjct: 203 YYINRGLVRYQMNDLRGAMADYDQVISMDSRNLIARFNRGLLRFQVGDNNRAIEDFDVVI 262

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           Q  P    A+  R   R   G+   A+QD    L+  P        R     K  D   A
Sbjct: 263 QQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLKQYPTFLPGFVSRSEAKRKLGDNVGA 322

Query: 503 VEDLSACVKLDKENKSA 519
             D  A +K++++ K+ 
Sbjct: 323 DRDYWAAIKMEEQAKNG 339



 Score = 40.4 bits (93), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 55/274 (20%), Positives = 118/274 (43%), Gaps = 10/274 (3%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R +RG+ +   G    AI  FD +++++P    A   R   R    +   A+ D+   ++
Sbjct: 238 RFNRGLLRFQVGDNNRAIEDFDVVIQQEPDNYMAYYNRALLRFETGDYRGAVQDYDVVLK 297

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA-A 502
             P+    +  R +A+  LG++V A +D   A++ E  + +    +   +      N  A
Sbjct: 298 QYPTFLPGFVSRSEAKRKLGDNVGADRDYWAAIKMEEQAKNGQLPKTSSSSSNTAVNGDA 357

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE-EAHLKAIQLDRNF---LEAWGHLT 558
             D S     ++ +K+   +  L +    + +K++ ++ ++    DRN    LE    LT
Sbjct: 358 KTDDSEENTREQSDKNINKFNRLVVYDKEQERKSKYQSEVRGRVQDRNVHVDLEPQFVLT 417

Query: 559 QF-----YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
            +      + L   +K +E     + + ++         L    +  H  +I + S+ + 
Sbjct: 418 YYEKADPVKKLVYYDKMVEDYNGQMVLKRKLRITNEEAALTEDQIAVHFASIDEYSAEIE 477

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            DP+N    + RA  +  + ++ EAIK++  A++
Sbjct: 478 RDPNNANAYFGRAMDFMLVQDFSEAIKNFSEAIE 511


>gi|449677145|ref|XP_004208790.1| PREDICTED: tetratricopeptide repeat protein 13-like [Hydra
           magnipapillata]
          Length = 565

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 167/413 (40%), Gaps = 73/413 (17%)

Query: 496 FKDFNAAVEDLSACVK-LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            KDF A  E L    K ++  N  +Y YLG+A  ++G  +KA +A   +++ D   L+  
Sbjct: 3   LKDFQAT-EYLKIGQKFINGHNAVSYEYLGMAYLNMGMLRKAIDALKTSLEFDSENLKII 61

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L   Y  + +SE A   L   L +D    K    +G +    GQ K+AI    S + +
Sbjct: 62  QTLGTTYNAIGDSENAHYYLDLALNLDPENPKTLETKGDVYFQSGQPKEAIHFYKSCIRL 121

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ--C-----LAFYQKE 667
           DP++  C+++++  + ++G++  A+K           +M K +L   C        Y ++
Sbjct: 122 DPTSTGCMFMKSVAFASVGQFFNAVK-----------AMTKVMLSGGCNQDYGEPLYLRD 170

Query: 668 IALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPK--NVCEKVYRQPPLRDSLKKGKL 725
              Y   K++     +  D D+   ++  W K++     N  E+   +P +        +
Sbjct: 171 FYRYLNRKLDEPLKNYRFDEDLPENYRNLWAKKVFSNYFNYTEQPGIEPHMIYDFFLSDV 230

Query: 726 RRQDFSVTKQKTALLLV-ADSIGKKIQYDCPGFLSNRRQHRMAGLAAIEIAQKVSKIWRS 784
               FS     T +LL  A+ +    QY   GF+ N+R +    LAAI++ Q +   W  
Sbjct: 231 EDFQFSELSNNTKVLLCKANQLAPYFQYRVDGFMENKRNNIAMALAAIDVGQTIKNYW-- 288

Query: 785 LQAEWKYSNRSSSKNGKRARRKDRINIASQNRGGAGCSTSSSSDTSSYGITEERSSGHPK 844
                       S  G + R                                        
Sbjct: 289 --------TYPKSTKGWKGRI--------------------------------------- 301

Query: 845 MSWQDVYTLAVKWRQISEPCDPVVWVNKLSEEF-NSGFGSHTPMILGQAKVVR 896
            SW+D+  +AVKWR++     PV+W+++L +   + GF +H  +  G  ++ R
Sbjct: 302 YSWRDLIEVAVKWRKLVSMDQPVIWLSELPKHIVDVGFTTHMLLKKGNVEMPR 354


>gi|309791531|ref|ZP_07686033.1| TPR repeat-containing protein [Oscillochloris trichoides DG-6]
 gi|308226456|gb|EFO80182.1| TPR repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 450

 Score = 97.1 bits (240), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 9/280 (3%)

Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           S++I++D      R  RG    + G++  A+  F + ++  P     L  RG      R 
Sbjct: 19  SRAIAIDPNYAWARYQRGQIYRDMGRHDDALEDFSRAIELAPDDAAFLAERGETYRVMRR 78

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + A++DF++AI  +     A   RGQ   +L    EA+ DLS+A+E  P+ + ++ ERG
Sbjct: 79  YDEALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPSMSWVIAERG 138

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            +       + A+ D +  V +  +   A  +  +A      Y +A      AIQLD + 
Sbjct: 139 ELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLEAAIQLDSS- 197

Query: 551 LEAWGHLTQF-YQDLA-NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            +AW +  +   Q L+ N ++ALE L + + +D  ++ A   RG     +GQ  +A++DL
Sbjct: 198 -QAWLYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALEDL 256

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           S  + +DP  I  L  RA+ Y ++  Y EA+ D+   +DL
Sbjct: 257 SRAIDLDPGYIWALSQRATLYRSLRRYDEALADFSRVIDL 296



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 119/256 (46%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A++ F Q +  D  Y  AL  RG      R  + A++D + AI+  PS       R
Sbjct: 78  RYDEALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPSMSWVIAER 137

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G+    LG + EAI D ++A+  +P+    L  R I   + + +  A+ DL A ++LD  
Sbjct: 138 GELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLEAAIQLDSS 197

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
               Y   G A    G   +A E   +AI LD N+  A        + +  +++ALE L 
Sbjct: 198 QAWLYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALEDLS 257

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + +D  +  A   R  L   L ++ +A+ D S  + ++PS++  L  R   +     Y
Sbjct: 258 RAIDLDPGYIWALSQRATLYRSLRRYDEALADFSRVIDLNPSHVSALAERGEIHRLHKRY 317

Query: 636 REAIKDYDAALDLELD 651
            EAI D+  A++ + D
Sbjct: 318 EEAIADFSRAIEAKSD 333



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 89/169 (52%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A++ F +++  +P +  AL  RG      +  E AI+DF+ AI++      A   R
Sbjct: 282 RYDEALADFSRVIDLNPSHVSALAERGEIHRLHKRYEEAIADFSRAIEAKSDYAWAIGSR 341

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           GQA  AL  + EA++D ++A E  P+ A I+ ERG      + +  A+ DLS  ++L+ +
Sbjct: 342 GQALRALNRNSEALEDFTRAAELRPDEAWIVAERGETLRLLRRYEEAITDLSKAIELNPQ 401

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           +  AY+  G A  S+  +++A     +A+++D N   AW      ++ +
Sbjct: 402 DSWAYSRRGAAYQSLKIFEEAFIDLTRAVEIDPNNAWAWAQRGSLFRQM 450



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 141/331 (42%), Gaps = 14/331 (4%)

Query: 376 SKSISVDFRLSRGIAQVNE-----GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           S++I +   +S  IA+  E     G+   AIS F Q +   P Y  AL  R  A   Q  
Sbjct: 121 SRAIELRPSMSWVIAERGELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQER 180

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
              A++D   AIQ + S    +  RG+A+   G   EA++DLS+A++ +PN A  L  RG
Sbjct: 181 YTEALADLEAAIQLDSSQAWLYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRG 240

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
                    + A+EDLS  + LD     A +       S+  Y +A     + I L+ + 
Sbjct: 241 AARRTMGQTDEALEDLSRAIDLDPGYIWALSQRATLYRSLRRYDEALADFSRVIDLNPSH 300

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
           + A     + ++     E+A+    + +     ++ A   RG  L  L ++ +A++D + 
Sbjct: 301 VSALAERGEIHRLHKRYEEAIADFSRAIEAKSDYAWAIGSRGQALRALNRNSEALEDFTR 360

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
              + P     +  R      +  Y EAI D   A  +EL+  + +       Y +  A 
Sbjct: 361 AAELRPDEAWIVAERGETLRLLRRYEEAITDLSKA--IELNPQDSWA------YSRRGAA 412

Query: 671 YTASKINSE-FCWFDIDGDIDPLFKEYWCKR 700
           Y + KI  E F       +IDP     W +R
Sbjct: 413 YQSLKIFEEAFIDLTRAVEIDPNNAWAWAQR 443



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 118/258 (45%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           + + ++ +A+S F + +  DP Y  A   RG         + A+ DF+ AI+  P     
Sbjct: 6   LRKDRHEAALSDFSRAIAIDPNYAWARYQRGQIYRDMGRHDDALEDFSRAIELAPDDAAF 65

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
              RG+    +    EA+ D S+A+  + + A  L  RG V    + ++ A+ DLS  ++
Sbjct: 66  LAERGETYRVMRRYDEALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIE 125

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           L           G  L ++G   +A     +A+ +  +++ A GH    Y++     +AL
Sbjct: 126 LRPSMSWVIAERGELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEAL 185

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
             L+  + +D   +  Y  RG      G   +A++DLS  + +DP+    L  R +    
Sbjct: 186 ADLEAAIQLDSSQAWLYAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRT 245

Query: 632 IGEYREAIKDYDAALDLE 649
           +G+  EA++D   A+DL+
Sbjct: 246 MGQTDEALEDLSRAIDLD 263



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 110/248 (44%), Gaps = 4/248 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG AQ   G    A+    + +  DP Y  AL  RG AR    + + A+ D + AI  +P
Sbjct: 205 RGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALEDLSRAIDLDP 264

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A  +R     +L    EA+ D S+ ++  P+    L ERG ++   K +  A+ D 
Sbjct: 265 GYIWALSQRATLYRSLRRYDEALADFSRVIDLNPSHVSALAERGEIHRLHKRYEEAIADF 324

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQDL 564
           S  ++   +   A    G AL ++    +A E   +A +L  +  EAW      +  + L
Sbjct: 325 SRAIEAKSDYAWAIGSRGQALRALNRNSEALEDFTRAAELRPD--EAWIVAERGETLRLL 382

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+A+  L + + ++ + S AY  RG     L   ++A  DL+  + IDP+N      
Sbjct: 383 RRYEEAITDLSKAIELNPQDSWAYSRRGAAYQSLKIFEEAFIDLTRAVEIDPNNAWAWAQ 442

Query: 625 RASCYHAI 632
           R S +  +
Sbjct: 443 RGSLFRQM 450



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 139/325 (42%), Gaps = 13/325 (4%)

Query: 369 CVTRISKSKSISVDFRL---SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +T  S++ ++  D+     SRG    +  +Y  A++   + ++  P     +  RG   
Sbjct: 82  ALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPSMSWVIAERGELL 141

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                 + AISDFT+A+   P    A   R  A        EA+ DL  A++ + + A +
Sbjct: 142 RTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQERYTEALADLEAAIQLDSSQAWL 201

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
             ERG       + + A+EDLS  + LD     A    G A  ++G+  +A E   +AI 
Sbjct: 202 YAERGEAQRLSGNLDEALEDLSRAIDLDPNYAWALASRGAARRTMGQTDEALEDLSRAID 261

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           LD  ++ A       Y+ L   ++AL    +V+ ++     A   RG +     ++++AI
Sbjct: 262 LDPGYIWALSQRATLYRSLRRYDEALADFSRVIDLNPSHVSALAERGEIHRLHKRYEEAI 321

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV-------L 658
            D S  +         +  R     A+    EA++D+  A +L  D  E ++       L
Sbjct: 322 ADFSRAIEAKSDYAWAIGSRGQALRALNRNSEALEDFTRAAELRPD--EAWIVAERGETL 379

Query: 659 QCLAFYQKEIA-LYTASKINSEFCW 682
           + L  Y++ I  L  A ++N +  W
Sbjct: 380 RLLRRYEEAITDLSKAIELNPQDSW 404



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 6/170 (3%)

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHL 557
           AA+ D S  + +D     A    G     +G +  A E   +AI+L   D  FL   G  
Sbjct: 13  AALSDFSRAIAIDPNYAWARYQRGQIYRDMGRHDDALEDFSRAIELAPDDAAFLAERG-- 70

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
            + Y+ +   ++AL    Q + +D  ++ A   RG +   L ++ +A+ DLS  + + PS
Sbjct: 71  -ETYRVMRRYDEALTDFSQAIALDSDYAWALGSRGQVYRSLRRYDEALADLSRAIELRPS 129

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
               +  R      +G   EAI D+  A+ ++ D +     + +A+ ++E
Sbjct: 130 MSWVIAERGELLRTLGRTDEAISDFTQAVTIQPDYVWALGHRAIAYREQE 179



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 42/84 (50%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E AL    + + ID  ++ A + RG +   +G+H  A++D S  + + P +   L  R  
Sbjct: 12  EAALSDFSRAIAIDPNYAWARYQRGQIYRDMGRHDDALEDFSRAIELAPDDAAFLAERGE 71

Query: 628 CYHAIGEYREAIKDYDAALDLELD 651
            Y  +  Y EA+ D+  A+ L+ D
Sbjct: 72  TYRVMRRYDEALTDFSQAIALDSD 95


>gi|427716097|ref|YP_007064091.1| hypothetical protein Cal7507_0771 [Calothrix sp. PCC 7507]
 gi|427348533|gb|AFY31257.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 420

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 14/272 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +  +  YA AI  F Q L+  P +PEA + RG A      +  A+SD+TE ++ N
Sbjct: 7   NRGLEKAKQKDYAGAIEEFSQALQLTPYFPEAYLQRGLAYYDSGAIHQAVSDYTEVLRLN 66

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA+  R  AR AL     A++D+ + +   PN A   + RGIV  K    + A+ +
Sbjct: 67  PEFVEAYYSRALARVALKNLPGALEDVDRTIRLNPNYAAAYNLRGIVRRKQGHIHDAIAN 126

Query: 506 LSACVKL-----DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-HLTQ 559
                +L     DKEN        L L SI E +  E+  ++        + +   + TQ
Sbjct: 127 FKKAAELYLVQKDKEN------CRLCLESIKELQPPEKPAVQQASSPSVTIRSTNEYFTQ 180

Query: 560 FYQ--DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                +  ++++A+  L  VL  D + ++AY  RG++   +G +++AI D +  L ++  
Sbjct: 181 LLDKAEKGDTQEAIADLNWVLQADPKDAQAYCCRGVVRCKMGSYREAIADFNQALHLNFQ 240

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +      R      +G+++ AI D++ AL ++
Sbjct: 241 DAIVYRNRGKARSFLGDHQGAIADFNQALQIQ 272



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 121/302 (40%), Gaps = 46/302 (15%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG+A  + G    A+S + ++L+ +P + EA   R  AR   + L  A+ D    I+ 
Sbjct: 40  LQRGLAYYDSGAIHQAVSDYTEVLRLNPEFVEAYYSRALARVALKNLPGALEDVDRTIRL 99

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKAL--------------------EFEPNSAD 484
           NP+   A+  RG  R   G   +AI +  KA                     E +P    
Sbjct: 100 NPNYAAAYNLRGIVRRKQGHIHDAIANFKKAAELYLVQKDKENCRLCLESIKELQPPEKP 159

Query: 485 ILHERGIVNFKFK----------------DFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
            + +    +   +                D   A+ DL+  ++ D ++  AY   G+   
Sbjct: 160 AVQQASSPSVTIRSTNEYFTQLLDKAEKGDTQEAIADLNWVLQADPKDAQAYCCRGVVRC 219

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAW-----GHLTQFYQDLANSEKALECLQQVLYIDKR 583
            +G Y++A     +A+ L  NF +A      G    F   L + + A+    Q L I  +
Sbjct: 220 KMGSYREAIADFNQALHL--NFQDAIVYRNRGKARSF---LGDHQGAIADFNQALQIQPQ 274

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            +  Y  RG      G +  AI+D +  L I+  + +  Y R   Y  + E ++A++DY 
Sbjct: 275 DALVYVARGNAHRAGGNYLSAIQDYTKALQINAHDAQAYYNRGITYTLLEEMQQAVEDYQ 334

Query: 644 AA 645
            A
Sbjct: 335 RA 336



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 89/176 (50%), Gaps = 5/176 (2%)

Query: 373 ISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           + ++ S SV  R      ++ + +  +G    AI+  + +L+ DP   +A   RG  R  
Sbjct: 161 VQQASSPSVTIRSTNEYFTQLLDKAEKGDTQEAIADLNWVLQADPKDAQAYCCRGVVRCK 220

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
                 AI+DF +A+  N      ++ RG+AR+ LG+   AI D ++AL+ +P  A +  
Sbjct: 221 MGSYREAIADFNQALHLNFQDAIVYRNRGKARSFLGDHQGAIADFNQALQIQPQDALVYV 280

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
            RG  +    ++ +A++D +  ++++  +  AY   G+  + + E ++A E + +A
Sbjct: 281 ARGNAHRAGGNYLSAIQDYTKALQINAHDAQAYYNRGITYTLLEEMQQAVEDYQRA 336



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 58/132 (43%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GL  +   +Y  A E   +A+QL   F EA+      Y D     +A+    +VL ++  
Sbjct: 9   GLEKAKQKDYAGAIEEFSQALQLTPYFPEAYLQRGLAYYDSGAIHQAVSDYTEVLRLNPE 68

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           F +AY+ R L    L     A++D+   + ++P+      LR       G   +AI ++ 
Sbjct: 69  FVEAYYSRALARVALKNLPGALEDVDRTIRLNPNYAAAYNLRGIVRRKQGHIHDAIANFK 128

Query: 644 AALDLELDSMEK 655
            A +L L   +K
Sbjct: 129 KAAELYLVQKDK 140


>gi|154490271|ref|ZP_02030532.1| hypothetical protein PARMER_00503 [Parabacteroides merdae ATCC
           43184]
 gi|423721808|ref|ZP_17695984.1| hypothetical protein HMPREF1078_00047 [Parabacteroides merdae
           CL09T00C40]
 gi|154089163|gb|EDN88207.1| tetratricopeptide repeat protein [Parabacteroides merdae ATCC
           43184]
 gi|409242821|gb|EKN35580.1| hypothetical protein HMPREF1078_00047 [Parabacteroides merdae
           CL09T00C40]
          Length = 707

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 7/318 (2%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           F +  ++    I+ D  L+ G   +    Y  +I  F+Q++K  P   E    R  A+  
Sbjct: 10  FQLCSLAMFAQINTDRVLTIGRNALYFEDYVLSIQYFNQVIKSKPWLAEPYFYRAVAKIN 69

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
             + + A  D T  ++ NP   +A+  RG AR +  +  EAI+D  K LEF+     +L 
Sbjct: 70  LDDYKGAEEDCTLCLERNPFLVQAYYARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLV 129

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
              + N + KDF  A +     +    +    Y   G   +  G+  KA   + KAI +D
Sbjct: 130 NVAVANIQKKDFKEAEKVFDELMTAHPKYSMNYLTRGAMYTEKGDTVKALADYDKAISMD 189

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
             +  A+G+    +  + N + AL  L + + ++ R S  Y  RGL+ + L   + A+ D
Sbjct: 190 PYYAPAYGNRAILHYQMNNMKDALADLNEAIRLNTRESGYYINRGLVRYQLKDLRGAMAD 249

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
               + +D  N+   + R      IG+   AI+D+D  +++E D+        +A+Y + 
Sbjct: 250 YDQVVSMDSHNLIARFNRGLLRAQIGDNNRAIEDFDVVIEIEPDN-------YMAYYNRA 302

Query: 668 IALYTASKINSEFCWFDI 685
           +  Y           FD+
Sbjct: 303 LLRYETGDYQGSVHDFDV 320



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 113/261 (43%), Gaps = 34/261 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+ ++ K+  AI  + + L+      + L+    A   +++ + A   F E + ++
Sbjct: 96  ARGIARQSQEKFDEAIEDYRKGLEFKAEDRQMLVNVAVANIQKKDFKEAEKVFDELMTAH 155

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG      G++V+A+ D  KA+  +P  A     R I++++  +   A+ D
Sbjct: 156 PKYSMNYLTRGAMYTEKGDTVKALADYDKAISMDPYYAPAYGNRAILHYQMNNMKDALAD 215

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L+  ++L+      Y   GL    + + + A   + + + +D + L A            
Sbjct: 216 LNEAIRLNTRESGYYINRGLVRYQLKDLRGAMADYDQVVSMDSHNLIA------------ 263

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
                            RF+     RGLL   +G + +AI+D    + I+P N    Y R
Sbjct: 264 -----------------RFN-----RGLLRAQIGDNNRAIEDFDVVIEIEPDNYMAYYNR 301

Query: 626 ASCYHAIGEYREAIKDYDAAL 646
           A   +  G+Y+ ++ D+D  L
Sbjct: 302 ALLRYETGDYQGSVHDFDVVL 322



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +D ++K +P +  A   RG  R  QR+  AAI D++EAIQ +P   EA+  RG AR + G
Sbjct: 618 YDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAEAYFNRGLARLSQG 677

Query: 464 ESVEAIQDLSKALEF 478
           ++   I DLSKA E 
Sbjct: 678 DANRGIADLSKAGEL 692



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 24/203 (11%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           A+I +F+  I  NP+  +A+  R      + +  EAI+D +K +E +P+ A     R +V
Sbjct: 495 ASIDNFSARIVKNPNDVDAYFGRALDFMLVQDFTEAIKDYTKVIELDPDFAMAYFNRAVV 554

Query: 493 NFKFKDFN-----AAVEDLSACVKLDKENKSAYTYLGLALS-----SIGEYKKAEEAHL- 541
            +K  D+N     ++ +D SA     K  K+       A S     S+ + K+A E  + 
Sbjct: 555 RYKQLDYNMSQAASSQDDFSAMSMNLKMGKNPTVVRTPATSDPASASLKDNKRAYEHEMI 614

Query: 542 -----KAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
                  I+L+  F+ A+   G+L    +D      A++   + +  D  F++AY  RGL
Sbjct: 615 TRDYDMVIKLNPGFVYAYFNRGNLRCAQRDF---RAAIQDYSEAIQRDPEFAEAYFNRGL 671

Query: 594 LLHGLGQHKKAIKDLSSG--LGI 614
                G   + I DLS    LGI
Sbjct: 672 ARLSQGDANRGIADLSKAGELGI 694



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 68/336 (20%), Positives = 128/336 (38%), Gaps = 55/336 (16%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + ++RG+ +        A++ +DQ++  D     A   RG  RA   +   AI DF   I
Sbjct: 229 YYINRGLVRYQLKDLRGAMADYDQVVSMDSHNLIARFNRGLLRAQIGDNNRAIEDFDVVI 288

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +  P    A+  R   R   G+   ++ D    L   PN     + R  V  K  D   A
Sbjct: 289 EIEPDNYMAYYNRALLRYETGDYQGSVHDFDVVLRQYPNFVAGYYSRAEVKRKMHDEVGA 348

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSS-----IG-------------------------- 531
             D      ++++ K+    LG A++S     IG                          
Sbjct: 349 DRDYWTAYNMEQKKKNG-NALGNAVASQNGNNIGTQLADPASKDENTREQSDKNIDKFNR 407

Query: 532 -------EYKKAE-EAHLKAIQLDRNF---LEAWGHLTQF-----YQDLANSEKALECLQ 575
                  E +K +  + ++    DRN    LE    LT +      + L   +K +E   
Sbjct: 408 LVVYDEEEVRKTKYNSEIRGRVQDRNVRVDLEPMFVLTYYEKVDPVKKLVYYDKMVEAYN 467

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
             L ++++         L    +  H  +I + S+ +  +P++++  + RA  +  + ++
Sbjct: 468 SRLVLERKLRITNEEAALTEDQVAVHFASIDNFSARIVKNPNDVDAYFGRALDFMLVQDF 527

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
            EAIKDY   ++L+ D         +A++ + +  Y
Sbjct: 528 TEAIKDYTKVIELDPDF-------AMAYFNRAVVRY 556



 Score = 44.3 bits (103), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           RA++ E+     D+   I+ NP    A+  RG  R A  +   AIQD S+A++ +P  A+
Sbjct: 607 RAYEHEM--ITRDYDMVIKLNPGFVYAYFNRGNLRCAQRDFRAAIQDYSEAIQRDPEFAE 664

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKL 512
               RG+      D N  + DLS   +L
Sbjct: 665 AYFNRGLARLSQGDANRGIADLSKAGEL 692


>gi|427716370|ref|YP_007064364.1| hypothetical protein Cal7507_1054 [Calothrix sp. PCC 7507]
 gi|427348806|gb|AFY31530.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 517

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 4/227 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D    RG+A+     YA AI+ ++Q +K +P   +A   RG +     + EAAI D+ +A
Sbjct: 258 DIYYKRGLARHEISDYAGAIADYNQAIKINPNNAKAYNKRGLSHYQLGDYEAAIDDYNQA 317

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP     +K R  AR+ LG++  AI+D ++A++  PN A +     I  +   +   
Sbjct: 318 IRINPHVAVNFKNRADARSQLGDNQGAIEDYTQAIKINPNYAIVDTNGSISRYLLTN--- 374

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
             +  +  +KL+  +  AY     A   +G+Y+ A   +++ I+++ N+++A+ +     
Sbjct: 375 -QQKFTKAIKLNPHDAVAYKNRADARYDLGDYEGAIADYIQVIKINPNYIDAYYNCGNAR 433

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            DL + E A+    QV+ I+  +  AY+ RG     +G  + +++D 
Sbjct: 434 YDLGDYEGAIASYTQVIKINANYIDAYYNRGNARFAMGNKQGSLEDF 480



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 123/255 (48%), Gaps = 6/255 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G + +A++ +++ LK  P   +    RG AR    +   AI+D+ +AI+ NP+  +A+ +
Sbjct: 237 GDFDAALTNYNKALKLHPDDADIYYKRGLARHEISDYAGAIADYNQAIKINPNNAKAYNK 296

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG +   LG+   AI D ++A+   P+ A     R     +  D   A+ED +  +K++ 
Sbjct: 297 RGLSHYQLGDYEAAIDDYNQAIRINPHVAVNFKNRADARSQLGDNQGAIEDYTQAIKINP 356

Query: 515 ENKSAYTYLGLALSSIGEYKKA-EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
                 T       SI  Y    ++   KAI+L+ +   A+ +      DL + E A+  
Sbjct: 357 NYAIVDTN-----GSISRYLLTNQQKFTKAIKLNPHDAVAYKNRADARYDLGDYEGAIAD 411

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             QV+ I+  +  AY+  G   + LG ++ AI   +  + I+ + I+  Y R +   A+G
Sbjct: 412 YIQVIKINPNYIDAYYNCGNARYDLGDYEGAIASYTQVIKINANYIDAYYNRGNARFAMG 471

Query: 634 EYREAIKDYDAALDL 648
             + +++D+  A D+
Sbjct: 472 NKQGSLEDFQKAADM 486



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/324 (20%), Positives = 159/324 (49%), Gaps = 30/324 (9%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDF-RLSRGIAQVNEGKYASAISIFDQILK--- 409
           +++E  NEA+      +     +K I +   R+S GI Q+    Y   +  + + L+   
Sbjct: 146 LIQEEVNEAQPEYHLFLAGFLPTKMIKLKTGRISFGIEQL---LYGGGLRCYLEQLQSAK 202

Query: 410 ------EDPMYPEALIGRGTA--------RAFQR-ELEAAISDFTEAIQSNPSAGEAWKR 454
                 +  + P ++I  G            F R + +AA++++ +A++ +P   + + +
Sbjct: 203 NGDSYHKQSIQPLSVIENGNNLLDEKLGDECFARGDFDAALTNYNKALKLHPDDADIYYK 262

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG AR  + +   AI D ++A++  PN+A   ++RG+ +++  D+ AA++D +  ++++ 
Sbjct: 263 RGLARHEISDYAGAIADYNQAIKINPNNAKAYNKRGLSHYQLGDYEAAIDDYNQAIRINP 322

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF--LEAWGHLTQFYQDLANSEKALE 572
                +     A S +G+ + A E + +AI+++ N+  ++  G ++++   L N +K  +
Sbjct: 323 HVAVNFKNRADARSQLGDNQGAIEDYTQAIKINPNYAIVDTNGSISRYL--LTNQQKFTK 380

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
            ++    ++   + AY  R    + LG ++ AI D    + I+P+ I+  Y   +  + +
Sbjct: 381 AIK----LNPHDAVAYKNRADARYDLGDYEGAIADYIQVIKINPNYIDAYYNCGNARYDL 436

Query: 633 GEYREAIKDYDAALDLELDSMEKF 656
           G+Y  AI  Y   + +  + ++ +
Sbjct: 437 GDYEGAIASYTQVIKINANYIDAY 460



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 51/90 (56%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R  A+ + G Y  AI+ + Q++K +P Y +A    G AR    + E AI+ +T+ I+ N
Sbjct: 394 NRADARYDLGDYEGAIADYIQVIKINPNYIDAYYNCGNARYDLGDYEGAIASYTQVIKIN 453

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKA 475
            +  +A+  RG AR A+G    +++D  KA
Sbjct: 454 ANYIDAYYNRGNARFAMGNKQGSLEDFQKA 483


>gi|225620848|ref|YP_002722106.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215668|gb|ACN84402.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 798

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 118/218 (54%), Gaps = 4/218 (1%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI DF  AI       E +  RG   + L E  EA+Q ++KA+E +PN  +  +ERG+++
Sbjct: 407 AIEDFDRAISLYDRDCEFYYYRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIH 466

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           ++  +++ A++D    ++LD E+  A  +L L+  ++ EY+ A + + + I+LD N  ++
Sbjct: 467 YRNSNYDLAIKDFKKVIELDNESVYANYHLALSYDALEEYETALKYYARVIELDPNTPDS 526

Query: 554 WGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           + +  L +   +L N  +A+E   +V+ ID     AY   G+    L +H+KAI   +  
Sbjct: 527 YYNRALAEIEMELYN--EAIEDFYKVIDIDNTIIDAYFNIGICYDSLKEHQKAIDCYTKV 584

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +  D S+I+  Y R      +  Y EA +DY  AL+++
Sbjct: 585 IEADKSSIDAYYNRGLSKVELKLYNEAFEDYIRALEID 622



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 132/264 (50%), Gaps = 4/264 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           G+ +   G Y  +I+ + +I++  D +Y  +   R  A    +  E A+ D+ +AI+ NP
Sbjct: 293 GLLEYKLGNYKESINYYTKIIEINDDIYY-SYYNRALAEESLQLYEDALKDYNKAIELNP 351

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               ++  RG  +  +    EA++D +KA+E E N A + + R ++  +   +  A+ED 
Sbjct: 352 EDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDF 411

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + L   +   Y Y GL  S + E  +A +   KAI+LD N++ A+      +   +N
Sbjct: 412 DRAISLYDRDCEFYYYRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIHYRNSN 471

Query: 567 SEKALECLQQVLYIDKRFSKA-YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            + A++  ++V+ +D     A YHL  L    L +++ A+K  +  + +DP+  +  Y R
Sbjct: 472 YDLAIKDFKKVIELDNESVYANYHL-ALSYDALEEYETALKYYARVIELDPNTPDSYYNR 530

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
           A     +  Y EAI+D+   +D++
Sbjct: 531 ALAEIEMELYNEAIEDFYKVIDID 554



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 133/283 (46%), Gaps = 12/283 (4%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I+ + +I VD   +RG++  N   Y  AI  FD++++  P    A   RG ++++  + E
Sbjct: 72  INNTHNILVDTYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGKYE 131

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
             I DF + ++ N    EA    G     LG   EAI++   AL  +    D  + RG  
Sbjct: 132 EGIKDFKKVLEFNEDDAEAIYYIGLGYFYLGRYQEAIKNFDIALLLDDEIDDAYYYRGHS 191

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
                 +  A+ D +  V+L  ++  +Y    L    +G Y+ A +   KAI+LD N+  
Sbjct: 192 KRYLNMYEEALSDFNKIVELRDDDSDSYYSKALTEFFLGLYEDAIKDFDKAIELDGNYSN 251

Query: 553 AWGH--LT----QFYQD-LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           A+    LT    + Y+D + + +KALE   +           Y+  GLL + LG +K++I
Sbjct: 252 AYYFRGLTKNSLELYKDAMDDYKKALEYADE-----DNIISIYNDMGLLEYKLGNYKESI 306

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              +  + I+       Y RA    ++  Y +A+KDY+ A++L
Sbjct: 307 NYYTKIIEINDDIYYSYYNRALAEESLQLYEDALKDYNKAIEL 349



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 163/375 (43%), Gaps = 77/375 (20%)

Query: 387 RGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           RG ++     Y  A+S F++I  L++D    ++   +     F    E AI DF +AI+ 
Sbjct: 188 RGHSKRYLNMYEEALSDFNKIVELRDDD--SDSYYSKALTEFFLGLYEDAIKDFDKAIEL 245

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILHERGIVNFKFKDFNA- 501
           + +   A+  RG  + +L    +A+ D  KALE+  E N   I ++ G++ +K  ++   
Sbjct: 246 DGNYSNAYYFRGLTKNSLELYKDAMDDYKKALEYADEDNIISIYNDMGLLEYKLGNYKES 305

Query: 502 ---------------------------------AVEDLSACVKLDKENKSAYTYLGLALS 528
                                            A++D +  ++L+ E+  +Y   GL  +
Sbjct: 306 INYYTKIIEINDDIYYSYYNRALAEESLQLYEDALKDYNKAIELNPEDTYSYNNRGLIKN 365

Query: 529 SIGEYKKAEEAHLKAIQLDRN---------FLEAWGHLTQ-------------------- 559
            +  Y +A E + KAI+L++N          L+   HL +                    
Sbjct: 366 EMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDFDRAISLYDRDCEFY 425

Query: 560 FYQDLANS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           +Y+ L NS     ++AL+ + + + +D  +  AY+ RGL+ +    +  AIKD    + +
Sbjct: 426 YYRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIHYRNSNYDLAIKDFKKVIEL 485

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTAS 674
           D  ++   Y  A  Y A+ EY  A+K Y   ++L+ ++ + +  + LA  + E+ LY  +
Sbjct: 486 DNESVYANYHLALSYDALEEYETALKYYARVIELDPNTPDSYYNRALA--EIEMELYNEA 543

Query: 675 KINSEFCWFDIDGDI 689
            I   +   DID  I
Sbjct: 544 -IEDFYKVIDIDNTI 557



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 2/242 (0%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           +F   RG+      +   A+   ++ ++ DP Y  A   RG         + AI DF + 
Sbjct: 423 EFYYYRGLTNSYLNELDEALQYINKAIELDPNYINAYNERGLIHYRNSNYDLAIKDFKKV 482

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ +  +  A      +  AL E   A++  ++ +E +PN+ D  + R +   + + +N 
Sbjct: 483 IELDNESVYANYHLALSYDALEEYETALKYYARVIELDPNTPDSYYNRALAEIEMELYNE 542

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ED    + +D     AY  +G+   S+ E++KA + + K I+ D++ ++A+ +     
Sbjct: 543 AIEDFYKVIDIDNTIIDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGLSK 602

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L    +A E   + L ID +++ AY+  G+            K+ S+   ID  N   
Sbjct: 603 VELKLYNEAFEDYIRALEIDPKYANAYN--GIGFSKTKYSNNEFKNGSTQRAIDLLNDAL 660

Query: 622 LY 623
           LY
Sbjct: 661 LY 662



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 84/167 (50%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
            D  + RG+  F  K++  A++D    ++L  E  +AY   G + S +G+Y++  +   K
Sbjct: 80  VDTYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGKYEEGIKDFKK 139

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
            ++ + +  EA  ++   Y  L   ++A++     L +D     AY+ RG     L  ++
Sbjct: 140 VLEFNEDDAEAIYYIGLGYFYLGRYQEAIKNFDIALLLDDEIDDAYYYRGHSKRYLNMYE 199

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +A+ D +  + +   + +  Y +A     +G Y +AIKD+D A++L+
Sbjct: 200 EALSDFNKIVELRDDDSDSYYSKALTEFFLGLYEDAIKDFDKAIELD 246


>gi|145505641|ref|XP_001438787.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405959|emb|CAK71390.1| unnamed protein product [Paramecium tetraurelia]
          Length = 348

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 132/268 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A     +Y  AI+ ++Q L  +P    A   +G A   Q + + AI  + E I  N
Sbjct: 38  NKGSALQKLNQYQEAINCYNQALSINPKNDSAWYQKGRALDTQNQSQEAIECYNEVISKN 97

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW R+G A   L +  EAI   ++AL   P      + +G++  + K +  A+E 
Sbjct: 98  PQHDSAWFRKGLALQNLNQHQEAINCYNQALSINPKRFSAWNNKGLIIQRLKQYQEAIEC 157

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + ++ +   A+   G AL  + +Y++A   + +A+ ++     AW +  +      
Sbjct: 158 YNQALFVNPKFDLAWNNKGSALQKLNQYQEAINCYNQALFINPKNDSAWYNKGRALDTQN 217

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            S++A+EC  + +  + ++  A+H +GL L  L Q+++ ++  +  + I+    +    +
Sbjct: 218 QSQEAIECYNEAISKNPQYDSAWHSKGLALQNLNQYEEVLECYNKSISINCQARKSFENK 277

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSM 653
               H+  +Y +AI ++D AL++E+ ++
Sbjct: 278 GVILHSQQKYIDAISNFDQALNIEIYAL 305



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 122/251 (48%), Gaps = 5/251 (1%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++ + AI  + +A+  NP    AW  +G A   L +  EAI   ++AL   P +    ++
Sbjct: 13  KQYQEAIECYNQALFINPKFDLAWNNKGSALQKLNQYQEAINCYNQALSINPKNDSAWYQ 72

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G           A+E  +  +  + ++ SA+   GLAL ++ ++++A   + +A+ ++ 
Sbjct: 73  KGRALDTQNQSQEAIECYNEVISKNPQHDSAWFRKGLALQNLNQHQEAINCYNQALSINP 132

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
               AW +     Q L   ++A+EC  Q L+++ +F  A++ +G  L  L Q+++AI   
Sbjct: 133 KRFSAWNNKGLIIQRLKQYQEAIECYNQALFVNPKFDLAWNNKGSALQKLNQYQEAINCY 192

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL--DLELDSM---EKFVLQCLAF 663
           +  L I+P N    Y +        + +EAI+ Y+ A+  + + DS    +   LQ L  
Sbjct: 193 NQALFINPKNDSAWYNKGRALDTQNQSQEAIECYNEAISKNPQYDSAWHSKGLALQNLNQ 252

Query: 664 YQKEIALYTAS 674
           Y++ +  Y  S
Sbjct: 253 YEEVLECYNKS 263



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/261 (20%), Positives = 122/261 (46%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI  ++Q L  +P +  A   +G+A     + + AI+ + +A+  NP    AW ++
Sbjct: 14  QYQEAIECYNQALFINPKFDLAWNNKGSALQKLNQYQEAINCYNQALSINPKNDSAWYQK 73

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G+A     +S EAI+  ++ +   P        +G+          A+   +  + ++ +
Sbjct: 74  GRALDTQNQSQEAIECYNEVISKNPQHDSAWFRKGLALQNLNQHQEAINCYNQALSINPK 133

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
             SA+   GL +  + +Y++A E + +A+ ++  F  AW +     Q L   ++A+ C  
Sbjct: 134 RFSAWNNKGLIIQRLKQYQEAIECYNQALFVNPKFDLAWNNKGSALQKLNQYQEAINCYN 193

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           Q L+I+ +   A++ +G  L    Q ++AI+  +  +  +P      + +      + +Y
Sbjct: 194 QALFINPKNDSAWYNKGRALDTQNQSQEAIECYNEAISKNPQYDSAWHSKGLALQNLNQY 253

Query: 636 REAIKDYDAALDLELDSMEKF 656
            E ++ Y+ ++ +   + + F
Sbjct: 254 EEVLECYNKSISINCQARKSF 274



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 6/166 (3%)

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
           T+L   L S+ +Y++A E + +A+ ++  F  AW +     Q L   ++A+ C  Q L I
Sbjct: 3   TFLNCILQSLKQYQEAIECYNQALFINPKFDLAWNNKGSALQKLNQYQEAINCYNQALSI 62

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           + +   A++ +G  L    Q ++AI+  +  +  +P +    + +      + +++EAI 
Sbjct: 63  NPKNDSAWYQKGRALDTQNQSQEAIECYNEVISKNPQHDSAWFRKGLALQNLNQHQEAIN 122

Query: 641 DYDAALDLELDSM-----EKFVLQCLAFYQKEIALYT-ASKINSEF 680
            Y+ AL +          +  ++Q L  YQ+ I  Y  A  +N +F
Sbjct: 123 CYNQALSINPKRFSAWNNKGLIIQRLKQYQEAIECYNQALFVNPKF 168


>gi|422340528|ref|ZP_16421469.1| TPR domain-containing protein [Treponema denticola F0402]
 gi|325475702|gb|EGC78878.1| TPR domain-containing protein [Treponema denticola F0402]
          Length = 337

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  + + ++ DP Y EA + RG    +  E E A++DF + I+  P   +A+  +G   
Sbjct: 59  AIYYYTKAIEADPDYIEAYLNRGEMYYYVNEHEKALADFDKVIELRPKEDKAYYFKGLLL 118

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G   +AI++L+ A+     + +    R     +  ++  A ED++  +KL++++   
Sbjct: 119 NDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQKSAKL 178

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G           A      A +LD N +  +  L   Y +     +A E + +++ 
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIATKLDPNDIWPYNGLLFIYIETKKHNEAFEIVNKMIK 238

Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
           +   +    Y +RGLL    GQ+K+A++D ++G+ + P N     +R   Y  + EY++A
Sbjct: 239 MKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRMYPQNASLYNIRGKIYFDLKEYKKA 298

Query: 639 IKDYDAALDLELDSME 654
           I+D+D A+   L+S +
Sbjct: 299 IEDFDMAIKFALESQD 314



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 80/148 (54%), Gaps = 3/148 (2%)

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           ++ S   Y  +A ++  E K    A   + KAI+ D +++EA+ +  + Y  +   EKAL
Sbjct: 35  QSYSQAKYFNMAGNTAKEKKDGTRAIYYYTKAIEADPDYIEAYLNRGEMYYYVNEHEKAL 94

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               +V+ +  +  KAY+ +GLLL+  G + KAI++L++ + ++    E    R++ Y  
Sbjct: 95  ADFDKVIELRPKEDKAYYFKGLLLNDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQ 154

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQ 659
           I EY +A +D + A+ L   S + + L+
Sbjct: 155 INEYEKAFEDINTAIKLNQKSAKLYNLR 182



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 74/156 (47%)

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
           +   AI   +KA+E +P+  +    RG + +   +   A+ D    ++L  +   AY + 
Sbjct: 55  DGTRAIYYYTKAIEADPDYIEAYLNRGEMYYYVNEHEKALADFDKVIELRPKEDKAYYFK 114

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GL L+  G Y KA E    AI L+    E +   +  Y+ +   EKA E +   + ++++
Sbjct: 115 GLLLNDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQK 174

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            +K Y+LRG L     +   AI D      +DP++I
Sbjct: 175 SAKLYNLRGRLHEHFERTDDAINDFKIATKLDPNDI 210


>gi|254412886|ref|ZP_05026658.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196180050|gb|EDX75042.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 456

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 142/316 (44%), Gaps = 31/316 (9%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           LS+GIA   +G Y  AI+  +Q L+ +P   +A   RG +   Q +   AI DF E ++ 
Sbjct: 28  LSQGIASFQQGDYRHAIAALNQALQINPDLAQAYHYRGMSHYCQGDALGAIGDFDEVLRL 87

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P   +A+  RG   A L +   A+QD ++AL+ + N A     R ++    +D++ A+ 
Sbjct: 88  DPQNAQAYSDRGLILATLNDRWGAMQDYNQALQLDSNYAKGYLNRSMLRLALEDYDGAIA 147

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++++      Y   G+A   +  Y+ A     +A+ ++ N   A+ +    +  L
Sbjct: 148 DCDQVIRMNPNLAEGYLNRGIARFEVEAYQDAIGDCDRALAINSNLAAAYFNRGMNHIAL 207

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN------ 618
              ++A+     VL ++   ++AY  RG +   LG++  +I+D    + ++P        
Sbjct: 208 GAYQEAIADFNHVLELNPNDAQAYLNRGYVRLQLGENWSSIEDFDQAMRLEPVAAKAFFQ 267

Query: 619 --------------------IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-- 656
                               I+ L +R +  + +G+Y  A+  Y+  L+L+ +  E +  
Sbjct: 268 QIANTLNQEPDTVEDDESKLIQGLMVRGNLRYQLGDYPAALNAYNQVLELDPNYTEAYNQ 327

Query: 657 ---VLQCLAFYQKEIA 669
              V   +  YQ  IA
Sbjct: 328 RSTVRSAMGDYQGAIA 343



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 116/229 (50%), Gaps = 5/229 (2%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +L   +S   E +QS+    + W  +G A    G+   AI  L++AL+  P+ A   H R
Sbjct: 8   KLSENLSAGMEDVQSD---ADTWLSQGIASFQQGDYRHAIAALNQALQINPDLAQAYHYR 64

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+ ++   D   A+ D    ++LD +N  AY+  GL L+++ +   A + + +A+QLD N
Sbjct: 65  GMSHYCQGDALGAIGDFDEVLRLDPQNAQAYSDRGLILATLNDRWGAMQDYNQALQLDSN 124

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           + + + + +     L + + A+    QV+ ++   ++ Y  RG+    +  ++ AI D  
Sbjct: 125 YAKGYLNRSMLRLALEDYDGAIADCDQVIRMNPNLAEGYLNRGIARFEVEAYQDAIGDCD 184

Query: 610 SGLGIDPSNIECLYLRASCYH-AIGEYREAIKDYDAALDLELDSMEKFV 657
             L I+ SN+   Y      H A+G Y+EAI D++  L+L  +  + ++
Sbjct: 185 RALAIN-SNLAAAYFNRGMNHIALGAYQEAIADFNHVLELNPNDAQAYL 232



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 141/315 (44%), Gaps = 33/315 (10%)

Query: 367 KFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
           +  +  ++++  I+ D   +   RG++   +G    AI  FD++L+ DP   +A   RG 
Sbjct: 41  RHAIAALNQALQINPDLAQAYHYRGMSHYCQGDALGAIGDFDEVLRLDPQNAQAYSDRGL 100

Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
             A   +   A+ D+ +A+Q + +  + +  R   R AL +   AI D  + +   PN A
Sbjct: 101 ILATLNDRWGAMQDYNQALQLDSNYAKGYLNRSMLRLALEDYDGAIADCDQVIRMNPNLA 160

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
           +    RGI  F+ + +  A+ D    + ++    +AY   G+   ++G Y++A       
Sbjct: 161 EGYLNRGIARFEVEAYQDAIGDCDRALAINSNLAAAYFNRGMNHIALGAYQEAIADFNHV 220

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEK--ALECLQQVLYIDKRFSKAYH------------ 589
           ++L+ N  +A  +L + Y  L   E   ++E   Q + ++   +KA+             
Sbjct: 221 LELNPN--DAQAYLNRGYVRLQLGENWSSIEDFDQAMRLEPVAAKAFFQQIANTLNQEPD 278

Query: 590 ---------LRGLLLHG-----LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
                    ++GL++ G     LG +  A+   +  L +DP+  E    R++   A+G+Y
Sbjct: 279 TVEDDESKLIQGLMVRGNLRYQLGDYPAALNAYNQVLELDPNYTEAYNQRSTVRSAMGDY 338

Query: 636 REAIKDYDAALDLEL 650
           + AI D D    L L
Sbjct: 339 QGAIADLDMVKTLSL 353



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 105/267 (39%), Gaps = 41/267 (15%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RGIA+     Y  AI   D+ L  +     A   RG         + AI+DF   ++ 
Sbjct: 164 LNRGIARFEVEAYQDAIGDCDRALAINSNLAAAYFNRGMNHIALGAYQEAIADFNHVLEL 223

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE---------------- 488
           NP+  +A+  RG  R  LGE+  +I+D  +A+  EP +A    +                
Sbjct: 224 NPNDAQAYLNRGYVRLQLGENWSSIEDFDQAMRLEPVAAKAFFQQIANTLNQEPDTVEDD 283

Query: 489 ----------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA-- 536
                     RG + ++  D+ AA+   +  ++LD     AY       S++G+Y+ A  
Sbjct: 284 ESKLIQGLMVRGNLRYQLGDYPAALNAYNQVLELDPNYTEAYNQRSTVRSAMGDYQGAIA 343

Query: 537 EEAHLKAIQL-------------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           +   +K + L             D+   + +  +     +  +   A+E    VL  ++ 
Sbjct: 344 DLDMVKTLSLATPLSPEPVSVATDKPTPQEYHKIGVHKLNQGDFHGAIEAFNYVLQENQN 403

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            + A   RG     LG   +AI D  +
Sbjct: 404 NATALTCRGFAYRRLGDKPRAIADFQT 430



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 85/165 (51%), Gaps = 2/165 (1%)

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           E+LSA ++  + +   +   G+A    G+Y+ A  A  +A+Q++ +  +A+ +    +  
Sbjct: 11  ENLSAGMEDVQSDADTWLSQGIASFQQGDYRHAIAALNQALQINPDLAQAYHYRGMSHYC 70

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
             ++  A+    +VL +D + ++AY  RGL+L  L     A++D +  L +D SN    Y
Sbjct: 71  QGDALGAIGDFDEVLRLDPQNAQAYSDRGLILATLNDRWGAMQDYNQALQLD-SNYAKGY 129

Query: 624 L-RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           L R+    A+ +Y  AI D D  + +  +  E ++ + +A ++ E
Sbjct: 130 LNRSMLRLALEDYDGAIADCDQVIRMNPNLAEGYLNRGIARFEVE 174



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYEI-QD 71
           LN     + + ++ +++DS  A     R  L    +L ++  AI   D ++  +  + + 
Sbjct: 105 LNDRWGAMQDYNQALQLDSNYAKGYLNRSMLR--LALEDYDGAIADCDQVIRMNPNLAEG 162

Query: 72  ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
             NR     ++E ++  I DCD+AL ++  L  AY  +G    ALG  +EA++
Sbjct: 163 YLNRGIARFEVEAYQDAIGDCDRALAINSNLAAAYFNRGMNHIALGAYQEAIA 215


>gi|189184574|ref|YP_001938359.1| TPR repeat-containing protein 08 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189181345|dbj|BAG41125.1| TPR repeat-containing protein 08 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 357

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 148/292 (50%), Gaps = 2/292 (0%)

Query: 366 KKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
           KKF +    K    S +  +++GIA    G++  AI  +D  +K  P   EA I +G + 
Sbjct: 24  KKFNLA--IKCNPYSAEAYINKGIALDKLGQHQEAIENYDIAIKYKPDSVEAYINKGISL 81

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
               + + AI ++  AI+  P + EA+  +G A   LG+  EAI++   A++++P+SA+ 
Sbjct: 82  KQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEAIENYDIAIKYKPDSAEA 141

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
              +G    +   +  A+E+    ++ +  + +AY   G+AL+ +G Y++A + +  AI+
Sbjct: 142 YINKGNTLMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYDIAIK 201

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
              +  +A+ +      +L   ++A+E     +  +    KAY+ +G+ L+ L Q+++AI
Sbjct: 202 YKPDLAKAYINKGNALNELGRYQEAIENFDTGIRYNPNDEKAYYNKGISLYQLVQYQEAI 261

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           ++    +   P   E    +      +G+++EAIK ++ A+  +    E ++
Sbjct: 262 ENCDIAIKHKPDLAEAYMNKGVALSKLGQHQEAIKKFNLAIKYKPGFAEAYL 313



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 130/272 (47%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K K  SV+  +++GI+    G+Y  AI  +D  +K  P   EA I +G A     + + A
Sbjct: 65  KYKPDSVEAYINKGISLKQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEA 124

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I ++  AI+  P + EA+  +G     L +  EAI++   A+   PN  +  + +GI   
Sbjct: 125 IENYDIAIKYKPDSAEAYINKGNTLMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALN 184

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           +   +  A+++    +K   +   AY   G AL+ +G Y++A E     I+ + N  +A+
Sbjct: 185 ELGRYQEAIDNYDIAIKYKPDLAKAYINKGNALNELGRYQEAIENFDTGIRYNPNDEKAY 244

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            +       L   ++A+E     +      ++AY  +G+ L  LGQH++AIK  +  +  
Sbjct: 245 YNKGISLYQLVQYQEAIENCDIAIKHKPDLAEAYMNKGVALSKLGQHQEAIKKFNLAIKY 304

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            P   E    +      +G+  +AIK+++ A+
Sbjct: 305 KPGFAEAYLNKGESLKQLGQREKAIKNFELAI 336



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 141/268 (52%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  AI  F+  +K +P   EA I +G A     + + AI ++  AI+  P + EA+  +
Sbjct: 18  KYQEAIKKFNLAIKCNPYSAEAYINKGIALDKLGQHQEAIENYDIAIKYKPDSVEAYINK 77

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G +   LG+  +AI++   A++++P+SA+    +G    +   +  A+E+    +K   +
Sbjct: 78  GISLKQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEAIENYDIAIKYKPD 137

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +  AY   G  L  + +Y++A E +  AI+ + N + A+ +      +L   ++A++   
Sbjct: 138 SAEAYINKGNTLMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYD 197

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
             +      +KAY  +G  L+ LG++++AI++  +G+  +P++ +  Y +    + + +Y
Sbjct: 198 IAIKYKPDLAKAYINKGNALNELGRYQEAIENFDTGIRYNPNDEKAYYNKGISLYQLVQY 257

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAF 663
           +EAI++ D A+  + D  E ++ + +A 
Sbjct: 258 QEAIENCDIAIKHKPDLAEAYMNKGVAL 285



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 129/253 (50%), Gaps = 22/253 (8%)

Query: 427 FQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           FQ R+ + AI  F  AI+ NP + EA+  +G A   LG+  EAI++   A++++P+S + 
Sbjct: 14  FQLRKYQEAIKKFNLAIKCNPYSAEAYINKGIALDKLGQHQEAIENYDIAIKYKPDSVEA 73

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
              +GI   +   +  A+++    +K   ++  AY   G AL+ +G+Y++A E +  AI+
Sbjct: 74  YINKGISLKQLGQYQDAIKNYDIAIKYKPDSAEAYINKGAALNELGQYQEAIENYDIAIK 133

Query: 546 LDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
              +  EA+         L Q+ + + N + A+ C       +     AY+ +G+ L+ L
Sbjct: 134 YKPDSAEAYINKGNTLMQLWQYQEAIENYDIAIRC-------NPNDVNAYYNKGIALNEL 186

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
           G++++AI +    +   P   +    + +  + +G Y+EAI+++D  +    +  EK   
Sbjct: 187 GRYQEAIDNYDIAIKYKPDLAKAYINKGNALNELGRYQEAIENFDTGIRYNPND-EK--- 242

Query: 659 QCLAFYQKEIALY 671
              A+Y K I+LY
Sbjct: 243 ---AYYNKGISLY 252



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 1/251 (0%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K K  S +  +++G A    G+Y  AI  +D  +K  P   EA I +G       + + A
Sbjct: 99  KYKPDSAEAYINKGAALNELGQYQEAIENYDIAIKYKPDSAEAYINKGNTLMQLWQYQEA 158

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I ++  AI+ NP+   A+  +G A   LG   EAI +   A++++P+ A     +G    
Sbjct: 159 IENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYDIAIKYKPDLAKAYINKGNALN 218

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           +   +  A+E+    ++ +  ++ AY   G++L  + +Y++A E    AI+   +  EA+
Sbjct: 219 ELGRYQEAIENFDTGIRYNPNDEKAYYNKGISLYQLVQYQEAIENCDIAIKHKPDLAEAY 278

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            +       L   ++A++     +     F++AY  +G  L  LGQ +KAIK+    +  
Sbjct: 279 MNKGVALSKLGQHQEAIKKFNLAIKYKPGFAEAYLNKGESLKQLGQREKAIKNFELAIKY 338

Query: 615 DPSNIECLYLR 625
            P  I   Y+R
Sbjct: 339 KPGLI-APYIR 348



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 23/159 (14%)

Query: 13  LNKTHKTICEIDELVRVDSVMAS---AITARIELAK--------LCSLRNWSKAIRILDS 61
           +N  +     ++EL R    + +   AI  + +LAK        L  L  + +AI   D+
Sbjct: 173 VNAYYNKGIALNELGRYQEAIDNYDIAIKYKPDLAKAYINKGNALNELGRYQEAIENFDT 232

Query: 62  LLAQSYEIQD---ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGR 118
            +   Y   D     N+     QL  ++  I +CD A++  P L +AY+ KG A S LG+
Sbjct: 233 GI--RYNPNDEKAYYNKGISLYQLVQYQEAIENCDIAIKHKPDLAEAYMNKGVALSKLGQ 290

Query: 119 KEEALS------VWEKGYEHA-LHQSADLKQFLELEELL 150
            +EA+        ++ G+  A L++   LKQ  + E+ +
Sbjct: 291 HQEAIKKFNLAIKYKPGFAEAYLNKGESLKQLGQREKAI 329



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)

Query: 46  LCSLRNWSKAIRILD-SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L  L  + +AI   D ++     ++    N+    ++L  ++  I + D A++  P L +
Sbjct: 149 LMQLWQYQEAIENYDIAIRCNPNDVNAYYNKGIALNELGRYQEAIDNYDIAIKYKPDLAK 208

Query: 105 AYILKGCAFSALGRKEEALSVWEKG 129
           AYI KG A + LGR +EA+  ++ G
Sbjct: 209 AYINKGNALNELGRYQEAIENFDTG 233


>gi|445063179|ref|ZP_21375426.1| hypothetical protein H263_07156 [Brachyspira hampsonii 30599]
 gi|444505434|gb|ELV05949.1| hypothetical protein H263_07156 [Brachyspira hampsonii 30599]
          Length = 290

 Score = 96.7 bits (239), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           SV+   +RG+A+ + G Y  AI  F+ +++ DP Y  A    G  +      E AI+ + 
Sbjct: 37  SVEIYNNRGLAKSSLGMYEEAIEDFENVIRIDPKYINAYNNIGLVKHNLGLYEEAINYYK 96

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +A+  + +  +A    G A   LG   EAI+   KA+E  PN A   +  G++      +
Sbjct: 97  KALLLDNNCVQACNNIGLANHNLGLYDEAIKYYIKAIEISPN-AHTYNNIGLIKNDLGMY 155

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+E  +  ++LD     AY  +GL+  ++  Y +A E   K IQLD   + A+ ++  
Sbjct: 156 EEAIEYFNKVIQLDNHYIKAYYNMGLSKYNLKNYDEALEYFNKVIQLDSKNIYAYNNIGI 215

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             QDL    +ALE   + L +DK +SKAY+ RG+    L  ++ A+ D +  L ++P+  
Sbjct: 216 IKQDLKLHSEALEYFNKALLLDKNYSKAYYNRGVSELKLELYECALYDFNICLELEPN-- 273

Query: 620 ECLYLRASCYHAIGEYREAIKD 641
              Y  A C    GE +  +K+
Sbjct: 274 ---YFPAYCKR--GEVKLKLKN 290



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 1/269 (0%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  L       +   Y  ++  F++++       E    RG A++     E AI DF  
Sbjct: 4   IDNLLELASKAFDSADYKKSLEYFNKLIFYYGDSVEIYNNRGLAKSSLGMYEEAIEDFEN 63

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            I+ +P    A+   G  +  LG   EAI    KAL  + N     +  G+ N     ++
Sbjct: 64  VIRIDPKYINAYNNIGLVKHNLGLYEEAINYYKKALLLDNNCVQACNNIGLANHNLGLYD 123

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A++     +++   N   Y  +GL  + +G Y++A E   K IQLD ++++A+ ++   
Sbjct: 124 EAIKYYIKAIEISP-NAHTYNNIGLIKNDLGMYEEAIEYFNKVIQLDNHYIKAYYNMGLS 182

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
             +L N ++ALE   +V+ +D +   AY+  G++   L  H +A++  +  L +D +  +
Sbjct: 183 KYNLKNYDEALEYFNKVIQLDSKNIYAYNNIGIIKQDLKLHSEALEYFNKALLLDKNYSK 242

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLE 649
             Y R      +  Y  A+ D++  L+LE
Sbjct: 243 AYYNRGVSELKLELYECALYDFNICLELE 271



 Score = 52.0 bits (123), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 15/176 (8%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N  D L E     F   D+  ++E  +  +    ++   Y   GLA SS+G Y++A E  
Sbjct: 2   NCIDNLLELASKAFDSADYKKSLEYFNKLIFYYGDSVEIYNNRGLAKSSLGMYEEAIEDF 61

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
              I++D  ++ A+ ++     +L   E+A+   ++ L +D    +A +  GL  H LG 
Sbjct: 62  ENVIRIDPKYINAYNNIGLVKHNLGLYEEAINYYKKALLLDNNCVQACNNIGLANHNLGL 121

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAI-------GEYREAIKDYDAALDLE 649
           + +AIK     + I P+        A  Y+ I       G Y EAI+ ++  + L+
Sbjct: 122 YDEAIKYYIKAIEISPN--------AHTYNNIGLIKNDLGMYEEAIEYFNKVIQLD 169


>gi|193214090|ref|YP_001995289.1| hypothetical protein Ctha_0371 [Chloroherpeton thalassium ATCC
           35110]
 gi|193087567|gb|ACF12842.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
           35110]
          Length = 361

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 14/224 (6%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +LE A+     AI+ NPS  EA+  RG  + +LG + E+I D S+AL++ PNS  I + R
Sbjct: 60  DLEKALQSLNGAIKKNPSYAEAYNFRGIVKKSLGRTQESIADFSQALKYSPNSTTIYNNR 119

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI---QL 546
           GI  +    +  A+ED +  + +D  N   +      L+++G  K A +++  AI     
Sbjct: 120 GISLYLVGRYQEALEDFNESLAIDNLNAEIWANRARTLTALGLTKDAIDSYNNAIGKEAY 179

Query: 547 DRNFLEAWGHLTQ---FYQD-LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           D    +  G L     FY D LA+ EKALE       +   ++  Y  R  +   LG + 
Sbjct: 180 DPELYKLRGDLYAKLGFYGDALADFEKALE-------LRDSYALCYLSRADVYRRLGLYA 232

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           +AI+D++  + + PSN E  Y R     + G Y +AI+++D AL
Sbjct: 233 EAIEDVNVAIKLIPSNPEGYYYRGLILISRGGYPQAIRNFDYAL 276



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 128/272 (47%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           V+ G    A+   +  +K++P Y EA   RG  +      + +I+DF++A++ +P++   
Sbjct: 56  VSTGDLEKALQSLNGAIKKNPSYAEAYNFRGIVKKSLGRTQESIADFSQALKYSPNSTTI 115

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +  RG +   +G   EA++D +++L  +  +A+I   R            A++  +  + 
Sbjct: 116 YNNRGISLYLVGRYQEALEDFNESLAIDNLNAEIWANRARTLTALGLTKDAIDSYNNAIG 175

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
            +  +   Y   G   + +G Y  A     KA++L  ++   +      Y+ L    +A+
Sbjct: 176 KEAYDPELYKLRGDLYAKLGFYGDALADFEKALELRDSYALCYLSRADVYRRLGLYAEAI 235

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           E +   + +     + Y+ RGL+L   G + +AI++    L  DP+     + R   + +
Sbjct: 236 EDVNVAIKLIPSNPEGYYYRGLILISRGGYPQAIRNFDYALSQDPNYHLAYHARGVAHDS 295

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +Y+ +I DY  A++L  ++ E +  + LA+
Sbjct: 296 LAQYQMSISDYTKAIELRANAWESYFNRGLAY 327



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 112/272 (41%), Gaps = 40/272 (14%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG---TARAFQRELEAAISDFTEAI 442
           +RGI+    G+Y  A+  F++ L  D +  E    R    TA    ++   AI  +  AI
Sbjct: 118 NRGISLYLVGRYQEALEDFNESLAIDNLNAEIWANRARTLTALGLTKD---AIDSYNNAI 174

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
                  E +K RG   A LG   +A+ D  KALE   + A     R  V  +   +  A
Sbjct: 175 GKEAYDPELYKLRGDLYAKLGFYGDALADFEKALELRDSYALCYLSRADVYRRLGLYAEA 234

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +ED++  +KL   N   Y Y GL L S G Y +A           RNF            
Sbjct: 235 IEDVNVAIKLIPSNPEGYYYRGLILISRGGYPQA----------IRNF------------ 272

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           D A S+            D  +  AYH RG+    L Q++ +I D +  + +  +  E  
Sbjct: 273 DYALSQ------------DPNYHLAYHARGVAHDSLAQYQMSISDYTKAIELRANAWESY 320

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           + R   Y  + E  +A KD   ALDL   S+E
Sbjct: 321 FNRGLAYIHLNELVKAKKDIKTALDLNPTSVE 352



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 133/333 (39%), Gaps = 52/333 (15%)

Query: 304 THDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAK 363
           T D+   L S + ++  + + +E+Y+   I       + ES +  S     LK + N   
Sbjct: 58  TGDLEKALQSLNGAIKKNPSYAEAYNFRGIVKKSLGRTQESIADFS---QALKYSPNSTT 114

Query: 364 --RNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYAS-------------AISIFDQIL 408
              N+   +  + + +    DF  S  I  +N   +A+             AI  ++  +
Sbjct: 115 IYNNRGISLYLVGRYQEALEDFNESLAIDNLNAEIWANRARTLTALGLTKDAIDSYNNAI 174

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
            ++   PE    RG   A       A++DF +A++   S    +  R      LG   EA
Sbjct: 175 GKEAYDPELYKLRGDLYAKLGFYGDALADFEKALELRDSYALCYLSRADVYRRLGLYAEA 234

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I+D++ A++  P++ +  + RG++      +  A+ +    +  D     AY   G+A  
Sbjct: 235 IEDVNVAIKLIPSNPEGYYYRGLILISRGGYPQAIRNFDYALSQDPNYHLAYHARGVAHD 294

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           S+ +Y+ +   + KAI+L  N   AW                               ++Y
Sbjct: 295 SLAQYQMSISDYTKAIELRAN---AW-------------------------------ESY 320

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             RGL    L +  KA KD+ + L ++P+++E 
Sbjct: 321 FNRGLAYIHLNELVKAKKDIKTALDLNPTSVEA 353



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 5/146 (3%)

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           S G+ +KA ++   AI+ + ++ EA+       + L  +++++    Q L      +  Y
Sbjct: 57  STGDLEKALQSLNGAIKKNPSYAEAYNFRGIVKKSLGRTQESIADFSQALKYSPNSTTIY 116

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL-- 646
           + RG+ L+ +G++++A++D +  L ID  N E    RA    A+G  ++AI  Y+ A+  
Sbjct: 117 NNRGISLYLVGRYQEALEDFNESLAIDNLNAEIWANRARTLTALGLTKDAIDSYNNAIGK 176

Query: 647 ---DLELDSMEKFVLQCLAFYQKEIA 669
              D EL  +   +   L FY   +A
Sbjct: 177 EAYDPELYKLRGDLYAKLGFYGDALA 202


>gi|119357637|ref|YP_912281.1| hypothetical protein Cpha266_1841 [Chlorobium phaeobacteroides DSM
            266]
 gi|119354986|gb|ABL65857.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
          Length = 3035

 Score = 96.7 bits (239), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 137/297 (46%), Gaps = 14/297 (4%)

Query: 400  AISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
            A+ +FDQ +  +P +P +   RG A RA QR  E A+  + +A+Q  P   +A+  RG  
Sbjct: 863  ALVLFDQAISINPGHPGSRNNRGNALRALQR-YEEALDSYEKALQLKPDYVDAYTNRGSV 921

Query: 459  RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
               L    EA+    +A+  +P+  +   +  +V    K +  A+      ++L +++  
Sbjct: 922  LLELKRYEEALASYERAIAIKPDHTEFYSDLAVVLLALKRYEEALATYERVLELRRDDPV 981

Query: 519  AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
             Y   G  L  +  Y++A  ++ KAI L+ ++ EA+ +L    + L   E+AL   ++ +
Sbjct: 982  VYNNRGNVLLELKRYEEALGSYEKAIALNPDYAEAYSNLGVTRKVLKRDEEALGSYEKAI 1041

Query: 579  YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
             +   F+ AY+ R +L + L ++++A+      + + P  +E    R +    +  Y EA
Sbjct: 1042 ALKPDFADAYYNRAVLFYDLDRYEEALASYDRAIVLKPDFVEVFSNRGNALLKLKRYEEA 1101

Query: 639  IKDYDAALDLELDSMEKFVLQCLAF------------YQKEIALYTASKINSEFCWF 683
            +  Y+ A+ L+ D  + F  Q  A             Y+K +A        S FC +
Sbjct: 1102 LGSYEKAIALKPDFADAFFNQGNALLELKRYEDALWSYEKTLACKPDYDFLSGFCLY 1158



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 137/299 (45%), Gaps = 12/299 (4%)

Query: 384  RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
            +L R +    EG+   A +++ +IL   P + +AL    T  A + + E A+  F +AI 
Sbjct: 813  KLQRALTLHQEGRLDEAEALYREILSSSPEHFDALQLSATIAAQRHDSEQALVLFDQAIS 872

Query: 444  SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
             NP    +   RG A  AL    EA+    KAL+ +P+  D    RG V  + K +  A+
Sbjct: 873  INPGHPGSRNNRGNALRALQRYEEALDSYEKALQLKPDYVDAYTNRGSVLLELKRYEEAL 932

Query: 504  EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                  + +  ++   Y+ L + L ++  Y++A   + + ++L R+    + +      +
Sbjct: 933  ASYERAIAIKPDHTEFYSDLAVVLLALKRYEEALATYERVLELRRDDPVVYNNRGNVLLE 992

Query: 564  LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            L   E+AL   ++ + ++  +++AY   G+    L + ++A+      + + P   +  Y
Sbjct: 993  LKRYEEALGSYEKAIALNPDYAEAYSNLGVTRKVLKRDEEALGSYEKAIALKPDFADAYY 1052

Query: 624  LRASCYHAIGEYREAIKDYDAALDLELDSMEKF------------VLQCLAFYQKEIAL 670
             RA  ++ +  Y EA+  YD A+ L+ D +E F              + L  Y+K IAL
Sbjct: 1053 NRAVLFYDLDRYEEALASYDRAIVLKPDFVEVFSNRGNALLKLKRYEEALGSYEKAIAL 1111



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 133/308 (43%), Gaps = 19/308 (6%)

Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSA 448
           AQ NE +   A+++FDQ L  +P +  +L  RG A R+ QR  E A+  F  A+   P  
Sbjct: 74  AQRNESE--KAVALFDQALNINPDHSGSLNNRGNALRSLQR-YEDALRSFERAVAVKPDY 130

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +A+  RG     L    +A++   KA+  +P+ A     RG        +  A+     
Sbjct: 131 ADAYINRGNVLMELLRCEDALESFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEK 190

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + L+     AY   GLAL  +  Y  A E + +AI L  ++ EA+ H    +  L   E
Sbjct: 191 AIALNPCFADAYYNKGLALQKLMRYDDALERYKQAIALKPDYTEAFLHQGNVFMALQRYE 250

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            AL   + V+ ++    +AY  RG  L  L ++  A+      L +   + +    R + 
Sbjct: 251 NALLSYEHVIALNPDDVEAYTNRGYALQELKRYGDALLSYDRVLALKCDDADAYNNRGNA 310

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFC-WFDIDG 687
           + A+  Y +A+  Y+  L L+ D            +   + LYT  KI    C W   D 
Sbjct: 311 FMALKRYEDALGSYNHVLALKPDYD----------FLSGLCLYTRMKI----CEWNAFDD 356

Query: 688 DIDPLFKE 695
            +D L K+
Sbjct: 357 QVDQLEKK 364



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 125/276 (45%)

Query: 384  RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
            +L R +    EG+   A +I  +IL   P + +AL    T  A + + E A++ F +A+ 
Sbjct: 2273 KLQRALKLHQEGRLDEAEAICQEILSSIPEHFDALQLSATIAAQRHDSEKALALFDQALA 2332

Query: 444  SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
              P    +   RG A   L    EA+    + L  +P+ A     RG      + +  AV
Sbjct: 2333 IKPDHARSLNNRGIALQELKRYEEALASYERLLAVKPDYAMAYSNRGNTLQGLRRYEEAV 2392

Query: 504  EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                  + L  +N +AY+  G+A+  +  Y  A E+H KAI L  ++ EA  +     Q+
Sbjct: 2393 SSYDQAIALRSDNANAYSNRGVAMMKLKRYADALESHDKAIALRPDYAEACSNRGNTLQE 2452

Query: 564  LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            L   E+AL   +Q + +   +++ Y   G +L  L ++++A+ +    + + P   +   
Sbjct: 2453 LKRYEEALMSYKQAIALKSDYAEFYSNYGNVLEELKRYEEALLNYEQAIALKPDFSDAYS 2512

Query: 624  LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
               +    +  YR+A+  YD A+ L  D +E +  Q
Sbjct: 2513 NLGNTLQVLMRYRDALASYDKAIGLNPDCIEAYCGQ 2548



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 113/250 (45%)

Query: 400  AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
            A+++FDQ L   P +  +L  RG A    +  E A++ +   +   P    A+  RG   
Sbjct: 2323 ALALFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERLLAVKPDYAMAYSNRGNTL 2382

Query: 460  AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              L    EA+    +A+    ++A+    RG+   K K +  A+E     + L  +   A
Sbjct: 2383 QGLRRYEEAVSSYDQAIALRSDNANAYSNRGVAMMKLKRYADALESHDKAIALRPDYAEA 2442

Query: 520  YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
             +  G  L  +  Y++A  ++ +AI L  ++ E + +     ++L   E+AL   +Q + 
Sbjct: 2443 CSNRGNTLQELKRYEEALMSYKQAIALKSDYAEFYSNYGNVLEELKRYEEALLNYEQAIA 2502

Query: 580  IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
            +   FS AY   G  L  L +++ A+      +G++P  IE    + +    +  Y EA+
Sbjct: 2503 LKPDFSDAYSNLGNTLQVLMRYRDALASYDKAIGLNPDCIEAYCGQGNALLELMRYEEAL 2562

Query: 640  KDYDAALDLE 649
              Y+ AL L+
Sbjct: 2563 VSYERALALK 2572



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 126/272 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L   +A    G    A +++  IL ++P + +AL    T  A + E E A++ F +A+  
Sbjct: 33  LHSALAFHQNGALDEAEALYQAILLQNPEHFDALQLLATIAAQRNESEKAVALFDQALNI 92

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    +   RG A  +L    +A++   +A+  +P+ AD    RG V  +      A+E
Sbjct: 93  NPDHSGSLNNRGNALRSLQRYEDALRSFERAVAVKPDYADAYINRGNVLMELLRCEDALE 152

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                + L  +   AY   G A+ ++  Y+ A  ++ KAI L+  F +A+ +     Q L
Sbjct: 153 SFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEKAIALNPCFADAYYNKGLALQKL 212

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              + ALE  +Q + +   +++A+  +G +   L +++ A+      + ++P ++E    
Sbjct: 213 MRYDDALERYKQAIALKPDYTEAFLHQGNVFMALQRYENALLSYEHVIALNPDDVEAYTN 272

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           R      +  Y +A+  YD  L L+ D  + +
Sbjct: 273 RGYALQELKRYGDALLSYDRVLALKCDDADAY 304



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 115/263 (43%)

Query: 384  RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
            R +RG A     +Y  A+  +++ L+  P Y +A   RG+     +  E A++ +  AI 
Sbjct: 881  RNNRGNALRALQRYEEALDSYEKALQLKPDYVDAYTNRGSVLLELKRYEEALASYERAIA 940

Query: 444  SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
              P   E +        AL    EA+    + LE   +   + + RG V  + K +  A+
Sbjct: 941  IKPDHTEFYSDLAVVLLALKRYEEALATYERVLELRRDDPVVYNNRGNVLLELKRYEEAL 1000

Query: 504  EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                  + L+ +   AY+ LG+    +   ++A  ++ KAI L  +F +A+ +    + D
Sbjct: 1001 GSYEKAIALNPDYAEAYSNLGVTRKVLKRDEEALGSYEKAIALKPDFADAYYNRAVLFYD 1060

Query: 564  LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            L   E+AL    + + +   F + +  RG  L  L ++++A+      + + P   +  +
Sbjct: 1061 LDRYEEALASYDRAIVLKPDFVEVFSNRGNALLKLKRYEEALGSYEKAIALKPDFADAFF 1120

Query: 624  LRASCYHAIGEYREAIKDYDAAL 646
             + +    +  Y +A+  Y+  L
Sbjct: 1121 NQGNALLELKRYEDALWSYEKTL 1143



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 108/245 (44%), Gaps = 6/245 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  +  +Y  A+  F++ +   P Y +A I RG         E A+  F +AI   
Sbjct: 102 NRGNALRSLQRYEDALRSFERAVAVKPDYADAYINRGNVLMELLRCEDALESFEKAIALK 161

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A  A+    +A+    KA+   P  AD  + +G+   K   ++ A+E 
Sbjct: 162 PDYAPAYFNRGNAVMAMHRYEDALASYEKAIALNPCFADAYYNKGLALQKLMRYDDALER 221

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L  +   A+ + G    ++  Y+ A  ++   I L+ + +EA+ +     Q+L 
Sbjct: 222 YKQAIALKPDYTEAFLHQGNVFMALQRYENALLSYEHVIALNPDDVEAYTNRGYALQELK 281

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP-----SNIE 620
               AL    +VL +    + AY+ RG     L +++ A+   +  L + P     S + 
Sbjct: 282 RYGDALLSYDRVLALKCDDADAYNNRGNAFMALKRYEDALGSYNHVLALKPDYDFLSGL- 340

Query: 621 CLYLR 625
           CLY R
Sbjct: 341 CLYTR 345



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 3/215 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  ++RG   +   +   A+  F++ +   P Y  A   RG A       E A++ + +A
Sbjct: 132 DAYINRGNVLMELLRCEDALESFEKAIALKPDYAPAYFNRGNAVMAMHRYEDALASYEKA 191

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I  NP   +A+  +G A   L    +A++   +A+  +P+  +    +G V    + +  
Sbjct: 192 IALNPCFADAYYNKGLALQKLMRYDDALERYKQAIALKPDYTEAFLHQGNVFMALQRYEN 251

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+      + L+ ++  AYT  G AL  +  Y  A  ++ + + L  +  +A+ +    +
Sbjct: 252 ALLSYEHVIALNPDDVEAYTNRGYALQELKRYGDALLSYDRVLALKCDDADAYNNRGNAF 311

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
             L   E AL     VL +   +     L GL L+
Sbjct: 312 MALKRYEDALGSYNHVLALKPDYD---FLSGLCLY 343



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 3/155 (1%)

Query: 476  LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
            L F P   D L     +  +  D   A+      + +  ++  +    G+AL  +  Y++
Sbjct: 1652 LSFSPEHFDALQLSATIAAQRHDSENALVLFDQALAIKPDHARSLNNRGIALQELKRYEE 1711

Query: 536  AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
            A  ++ +AI +  +F+E + +     Q+L   E+AL C    + +   +++ Y+ +G  L
Sbjct: 1712 ALASYERAIAVKPDFIEPYSNRGNTLQELKRYEEALACYDSAIALKPDYAEPYYNQGNAL 1771

Query: 596  HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
              L + + A++     L + P   +  +L   C H
Sbjct: 1772 LELKRDEDAVRSYEKALALKP---DYDFLSGLCLH 1803



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 6/182 (3%)

Query: 372  RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            R +K +S+    +L R +    EG+   A +++ +IL   P + +AL    T  A + + 
Sbjct: 1620 RSTKEESV----KLQRALKLHQEGRLDEAEALYREILSFSPEHFDALQLSATIAAQRHDS 1675

Query: 432  EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
            E A+  F +A+   P    +   RG A   L    EA+    +A+  +P+  +    RG 
Sbjct: 1676 ENALVLFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERAIAVKPDFIEPYSNRGN 1735

Query: 492  VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRN 549
               + K +  A+    + + L  +    Y   G AL  +   + A  ++ KA+ L  D +
Sbjct: 1736 TLQELKRYEEALACYDSAIALKPDYAEPYYNQGNALLELKRDEDAVRSYEKALALKPDYD 1795

Query: 550  FL 551
            FL
Sbjct: 1796 FL 1797



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%)

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            +SE AL    Q L I    +++ + RG+ L  L ++++A+      + + P  IE    R
Sbjct: 1674 DSENALVLFDQALAIKPDHARSLNNRGIALQELKRYEEALASYERAIAVKPDFIEPYSNR 1733

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
             +    +  Y EA+  YD+A+ L+ D  E +  Q
Sbjct: 1734 GNTLQELKRYEEALACYDSAIALKPDYAEPYYNQ 1767


>gi|449107797|ref|ZP_21744444.1| hypothetical protein HMPREF9722_00140 [Treponema denticola ATCC
           33520]
 gi|448962748|gb|EMB43435.1| hypothetical protein HMPREF9722_00140 [Treponema denticola ATCC
           33520]
          Length = 337

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  + + ++ DP Y EA + RG    +  E E A++DF + I+  P   +A+  +G   
Sbjct: 59  AIYYYTKAIEADPDYIEAYLNRGEMYYYVNEHEKALADFDKVIELRPKEDKAYYFKGLLL 118

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G   +AI++L+ A+     + +    R     +  ++  A ED++  +KL++++   
Sbjct: 119 NDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQKSAKL 178

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G           A      A +LD N +  +  L   Y +     +A E + +++ 
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIATKLDPNDIWPYNGLLFIYIETKKHNEAFEIVNKMIK 238

Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
           +   +    Y +RGLL    GQ+K+A++D ++G+ + P N     +R   Y  + EY++A
Sbjct: 239 MKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRMYPQNASLYNIRGKIYFDLKEYKKA 298

Query: 639 IKDYDAALDLELDS 652
           I+D+D A+   L+S
Sbjct: 299 IEDFDMAIKFALES 312



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/148 (28%), Positives = 80/148 (54%), Gaps = 3/148 (2%)

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           ++ S   Y  +A ++  E K    A   + KAI+ D +++EA+ +  + Y  +   EKAL
Sbjct: 35  QSYSQAKYFNMAGNTAKEKKDGTRAIYYYTKAIEADPDYIEAYLNRGEMYYYVNEHEKAL 94

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               +V+ +  +  KAY+ +GLLL+  G + KAI++L++ + ++    E    R++ Y  
Sbjct: 95  ADFDKVIELRPKEDKAYYFKGLLLNDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQ 154

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQ 659
           I EY +A +D + A+ L   S + + L+
Sbjct: 155 INEYEKAFEDINTAIKLNQKSAKLYNLR 182



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/156 (26%), Positives = 74/156 (47%)

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
           +   AI   +KA+E +P+  +    RG + +   +   A+ D    ++L  +   AY + 
Sbjct: 55  DGTRAIYYYTKAIEADPDYIEAYLNRGEMYYYVNEHEKALADFDKVIELRPKEDKAYYFK 114

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GL L+  G Y KA E    AI L+    E +   +  Y+ +   EKA E +   + ++++
Sbjct: 115 GLLLNDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQK 174

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            +K Y+LRG L     +   AI D      +DP++I
Sbjct: 175 SAKLYNLRGRLHEHFERTDDAINDFKIATKLDPNDI 210


>gi|425456094|ref|ZP_18835805.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9807]
 gi|389802896|emb|CCI18115.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9807]
          Length = 492

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 143/282 (50%), Gaps = 5/282 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG     + KY  A+S F++ +  +  + +A   RG     Q++ E A++D+ +AI  N
Sbjct: 207 NRGNLYSYQQKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDIN 266

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL---HERGIVNFKFKDFNAA 502
           P+   A+  RG   + L +   A+ D +KA++   NS D+      RGI   + + ++ A
Sbjct: 267 PNDAGAYASRGNLYSDLQKYELALADYNKAIDI--NSDDVFSAYFYRGIFYHRQQKYDLA 324

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + DL+  ++L+      Y   G+   +  +Y+ A   + KAI+LD N+ +A+ +  + Y+
Sbjct: 325 LADLNKAIELNSNFSHFYFVRGILHENKEKYELALADYSKAIELDSNYAQAYYNRGELYR 384

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                + AL    + + I+  ++ AY+ RGLL +   ++  A+ D S  + I+P+  +  
Sbjct: 385 LQKKYDLALADYSKAIDINPNYANAYYNRGLLYYNQQKYDLALSDYSKAIDINPNYADAY 444

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
             R   Y+ + +Y  A+ DY+ A+ +  +  + +  + L +Y
Sbjct: 445 NNRGVVYYNLQKYDLALADYNQAIRINPNYAQAYYNRGLLYY 486



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 76/353 (21%), Positives = 163/353 (46%), Gaps = 11/353 (3%)

Query: 352 WDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQIL 408
           W +L+ +   +++     +   +K+  ++ ++ ++   R +   ++ KY  A+  +++ +
Sbjct: 102 WYLLRASYYSSQQKYDLALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALDDYNKAI 161

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           + +P Y     GRG     Q++ E A++DF +AI  NP+  +A+  RG   +   +   A
Sbjct: 162 ELNPNYGLYYRGRGLNYLLQQKYELALADFNKAIDINPNNADAYNNRGNLYSYQQKYDLA 221

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           + D +KA++   N A     RG +  + + +  A+ D +  + ++  +  AY   G   S
Sbjct: 222 LSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAGAYASRGNLYS 281

Query: 529 SIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
            + +Y+ A   + KAI ++  +   A+ +   FY      + AL  L + + ++  FS  
Sbjct: 282 DLQKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQKYDLALADLNKAIELNSNFSHF 341

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y +RG+L     +++ A+ D S  + +D +  +  Y R   Y    +Y  A+ DY  A+D
Sbjct: 342 YFVRGILHENKEKYELALADYSKAIELDSNYAQAYYNRGELYRLQKKYDLALADYSKAID 401

Query: 648 LELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           +  +          A+Y + +  Y   K +     +    DI+P + + +  R
Sbjct: 402 INPNYAN-------AYYNRGLLYYNQQKYDLALSDYSKAIDINPNYADAYNNR 447



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 120/256 (46%), Gaps = 6/256 (2%)

Query: 396 KYASAISIFDQILKEDPMYPEAL--IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +Y   ++  +Q +K   + P AL  + R +  + Q++ + A+ D  +AI+ NP+   A+ 
Sbjct: 82  RYDEGLAAINQAIK---LAPRALWYLLRASYYSSQQKYDLALDDHNKAIELNPNYAMAYS 138

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            R    ++  +   A+ D +KA+E  PN       RG+     + +  A+ D +  + ++
Sbjct: 139 VRALHYSSQQKYDLALDDYNKAIELNPNYGLYYRGRGLNYLLQQKYELALADFNKAIDIN 198

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
             N  AY   G   S   +Y  A     KAI L+RNF +A+ +    Y+     E AL  
Sbjct: 199 PNNADAYNNRGNLYSYQQKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALAD 258

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAI 632
             + + I+   + AY  RG L   L +++ A+ D +  + I+  ++   Y  R   YH  
Sbjct: 259 YNKAIDINPNDAGAYASRGNLYSDLQKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQ 318

Query: 633 GEYREAIKDYDAALDL 648
            +Y  A+ D + A++L
Sbjct: 319 QKYDLALADLNKAIEL 334



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 15/171 (8%)

Query: 336 NKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG 395
           NK+ +   + S   F   +L E        +K+ +     SK+I +D   ++  A  N G
Sbjct: 329 NKAIELNSNFSHFYFVRGILHENK------EKYELALADYSKAIELDSNYAQ--AYYNRG 380

Query: 396 -------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
                  KY  A++ + + +  +P Y  A   RG     Q++ + A+SD+++AI  NP+ 
Sbjct: 381 ELYRLQKKYDLALADYSKAIDINPNYANAYYNRGLLYYNQQKYDLALSDYSKAIDINPNY 440

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            +A+  RG     L +   A+ D ++A+   PN A   + RG++ +  + +
Sbjct: 441 ADAYNNRGVVYYNLQKYDLALADYNQAIRINPNYAQAYYNRGLLYYNLQKY 491


>gi|398825329|ref|ZP_10583630.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
 gi|398223937|gb|EJN10265.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
          Length = 368

 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 1/263 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G    A++ +++ ++ DP Y  +   R      + EL+ AI+ FTEAI+ NP
Sbjct: 87  RGRAYSARGDRDHAMADYNEAIRLDPNYGPSYTSRAEGYFNKGELDLAIAGFTEAIEHNP 146

Query: 447 S-AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                A   RGQA AA G++  A+ D ++A+   P +A     R  V     +F+AA++D
Sbjct: 147 KHIYFATLMRGQAYAAKGDTDRAVADYTEAMRLNPAAASPYELRSNVRVNKGEFDAALDD 206

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  V+L+  +   +    + L    +   A +   +  +LD  F+ A+      +    
Sbjct: 207 CNNSVRLEPGSAGGHFCRAVVLLKWDDADGAIQEFDEVTRLDPTFMRAYSARALAWHKKG 266

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + ++A+    + + +    +  Y  R + L  LGQH +A+ D +  L IDP + + L  R
Sbjct: 267 DDKRAVADFDEAIRLQPGNATGYKNRAMALRELGQHARALADYNEALRIDPRDQDALVNR 326

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
           A  Y  + + + A  D+++ L L
Sbjct: 327 ALLYMMMSDTKHARADFNSVLAL 349



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 3/235 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           SR     N+G+   AI+ F + ++ +P  +Y   L+ RG A A + + + A++D+TEA++
Sbjct: 120 SRAEGYFNKGELDLAIAGFTEAIEHNPKHIYFATLM-RGQAYAAKGDTDRAVADYTEAMR 178

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            NP+A   ++ R   R   GE   A+ D + ++  EP SA     R +V  K+ D + A+
Sbjct: 179 LNPAAASPYELRSNVRVNKGEFDAALDDCNNSVRLEPGSAGGHFCRAVVLLKWDDADGAI 238

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           ++     +LD     AY+   LA    G+ K+A     +AI+L       + +     ++
Sbjct: 239 QEFDEVTRLDPTFMRAYSARALAWHKKGDDKRAVADFDEAIRLQPGNATGYKNRAMALRE 298

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           L    +AL    + L ID R   A   R LL   +   K A  D +S L + P++
Sbjct: 299 LGQHARALADYNEALRIDPRDQDALVNRALLYMMMSDTKHARADFNSVLALPPND 353



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 127/309 (41%), Gaps = 39/309 (12%)

Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
           I+  DP    A   RG A   +R+ + A  D + AI+ +P+ G A+  RG+A +A G+  
Sbjct: 39  IIAADPTNAVAYELRGEAYYMKRDRDRAFDDCSAAIRIDPNFGRAYNCRGRAYSARGDRD 98

Query: 467 EAIQDLSKALEFEPN-------SADILHERGIVNFKFKDFNAAVE--------------- 504
            A+ D ++A+  +PN        A+    +G ++     F  A+E               
Sbjct: 99  HAMADYNEAIRLDPNYGPSYTSRAEGYFNKGELDLAIAGFTEAIEHNPKHIYFATLMRGQ 158

Query: 505 -------------DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                        D +  ++L+    S Y        + GE+  A +    +++L+    
Sbjct: 159 AYAAKGDTDRAVADYTEAMRLNPAAASPYELRSNVRVNKGEFDAALDDCNNSVRLEPG-- 216

Query: 552 EAWGHLTQFYQDLA--NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
            A GH  +    L   +++ A++   +V  +D  F +AY  R L  H  G  K+A+ D  
Sbjct: 217 SAGGHFCRAVVLLKWDDADGAIQEFDEVTRLDPTFMRAYSARALAWHKKGDDKRAVADFD 276

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
             + + P N      RA     +G++  A+ DY+ AL ++    +  V + L +      
Sbjct: 277 EAIRLQPGNATGYKNRAMALRELGQHARALADYNEALRIDPRDQDALVNRALLYMMMSDT 336

Query: 670 LYTASKINS 678
            +  +  NS
Sbjct: 337 KHARADFNS 345



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 56/119 (47%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
            AI  FD++ + DP +  A   R  A   + + + A++DF EAI+  P     +K R  A
Sbjct: 236 GAIQEFDEVTRLDPTFMRAYSARALAWHKKGDDKRAVADFDEAIRLQPGNATGYKNRAMA 295

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
              LG+   A+ D ++AL  +P   D L  R ++     D   A  D ++ + L   +K
Sbjct: 296 LRELGQHARALADYNEALRIDPRDQDALVNRALLYMMMSDTKHARADFNSVLALPPNDK 354



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/233 (21%), Positives = 103/233 (44%), Gaps = 1/233 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I++ T  I ++P+   A++ RG+A     +   A  D S A+  +PN     + RG    
Sbjct: 33  IAEKTAIIAADPTNAVAYELRGEAYYMKRDRDRAFDDCSAAIRIDPNFGRAYNCRGRAYS 92

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEA 553
              D + A+ D +  ++LD     +YT       + GE   A     +AI+ + ++   A
Sbjct: 93  ARGDRDHAMADYNEAIRLDPNYGPSYTSRAEGYFNKGELDLAIAGFTEAIEHNPKHIYFA 152

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
                Q Y    ++++A+    + + ++   +  Y LR  +    G+   A+ D ++ + 
Sbjct: 153 TLMRGQAYAAKGDTDRAVADYTEAMRLNPAAASPYELRSNVRVNKGEFDAALDDCNNSVR 212

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           ++P +    + RA       +   AI+++D    L+   M  +  + LA+++K
Sbjct: 213 LEPGSAGGHFCRAVVLLKWDDADGAIQEFDEVTRLDPTFMRAYSARALAWHKK 265


>gi|429124529|ref|ZP_19185061.1| hypothetical protein A966_09616 [Brachyspira hampsonii 30446]
 gi|426279540|gb|EKV56562.1| hypothetical protein A966_09616 [Brachyspira hampsonii 30446]
          Length = 357

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 130/268 (48%), Gaps = 1/268 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           SV+   +RG+A+ + G Y  AI  F+ +++ DP Y  A    G  +      E AI+ + 
Sbjct: 37  SVEIYNNRGLAKSSLGMYEEAIDDFENVIRIDPKYINAYNNIGLVKHNLGLYEEAINYYN 96

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +A+  + +  +A+   G A   LG   EAI+   KA+E  PN     +  G++      +
Sbjct: 97  KALLLDNNCIQAYNNIGLANHNLGLYEEAIKYYIKAIEIFPN-VHTYNNIGLIKNDLGLY 155

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           + AVE     + LD     AY  +GL+  ++  Y +A E   K I+LD   + A+ ++  
Sbjct: 156 DEAVEYFKKVILLDDRYTKAYYNMGLSKYNLKNYDEALEYFNKVIELDSKNIYAYNNIGI 215

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             QDL    +ALE   + L +DK + KAY+ RG+    L  ++ A+ D +    ++P+  
Sbjct: 216 INQDLKLHREALEYFNKALVLDKNYYKAYYNRGVSELELELYECALYDFNICAELEPNYF 275

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALD 647
                R      +  YRE+++D++  ++
Sbjct: 276 PTYCKRGEVKFKLKNYRESLEDFNKYIE 303



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 1/253 (0%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  ++  FD+++       E    RG A++     E AI DF   I+ +P    A+   G
Sbjct: 20  YKKSLEYFDKLIFYYGDSVEIYNNRGLAKSSLGMYEEAIDDFENVIRIDPKYINAYNNIG 79

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
             +  LG   EAI   +KAL  + N     +  G+ N     +  A++     +++   N
Sbjct: 80  LVKHNLGLYEEAINYYNKALLLDNNCIQAYNNIGLANHNLGLYEEAIKYYIKAIEI-FPN 138

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
              Y  +GL  + +G Y +A E   K I LD  + +A+ ++     +L N ++ALE   +
Sbjct: 139 VHTYNNIGLIKNDLGLYDEAVEYFKKVILLDDRYTKAYYNMGLSKYNLKNYDEALEYFNK 198

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
           V+ +D +   AY+  G++   L  H++A++  +  L +D +  +  Y R      +  Y 
Sbjct: 199 VIELDSKNIYAYNNIGIINQDLKLHREALEYFNKALVLDKNYYKAYYNRGVSELELELYE 258

Query: 637 EAIKDYDAALDLE 649
            A+ D++   +LE
Sbjct: 259 CALYDFNICAELE 271



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 9/183 (4%)

Query: 377 KSISVDFRLSR-----GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K I +D R ++     G+++ N   Y  A+  F+++++ D     A    G      +  
Sbjct: 164 KVILLDDRYTKAYYNMGLSKYNLKNYDEALEYFNKVIELDSKNIYAYNNIGIINQDLKLH 223

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             A+  F +A+  + +  +A+  RG +   L     A+ D +   E EPN      +RG 
Sbjct: 224 REALEYFNKALVLDKNYYKAYYNRGVSELELELYECALYDFNICAELEPNYFPTYCKRGE 283

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V FK K++  ++ED +  ++  + +K  Y Y+G     + +Y  A    +K I +  N +
Sbjct: 284 VKFKLKNYRESLEDFNKYIEHREADKKIYFYIGFCGYKLKDYNNA----IKYINMSYNNI 339

Query: 552 EAW 554
           + +
Sbjct: 340 KTF 342



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 49/94 (52%)

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           D A+ +K+LE   ++++      + Y+ RGL    LG +++AI D  + + IDP  I   
Sbjct: 16  DSADYKKSLEYFDKLIFYYGDSVEIYNNRGLAKSSLGMYEEAIDDFENVIRIDPKYINAY 75

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
                  H +G Y EAI  Y+ AL L+ + ++ +
Sbjct: 76  NNIGLVKHNLGLYEEAINYYNKALLLDNNCIQAY 109


>gi|284035302|ref|YP_003385232.1| hypothetical protein Slin_0369 [Spirosoma linguale DSM 74]
 gi|283814595|gb|ADB36433.1| TPR repeat-containing protein [Spirosoma linguale DSM 74]
          Length = 446

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 91/417 (21%), Positives = 175/417 (41%), Gaps = 64/417 (15%)

Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDF---- 383
           + +S I+ +KSSD T +    S    M  E +  +  N+      +   +   +D+    
Sbjct: 30  FFESGINRSKSSDFTGALQAFSMAITMNPENA-PSYYNRGLAKANLKDHRGAILDYDKAI 88

Query: 384 ---------RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
                     LSRG+++  +  +  A+  F + ++ +P  P+A   RG +R+   + + A
Sbjct: 89  ELNSKDAMAYLSRGVSKSRQDDHRGALLDFSRSIELNPDDPQAYYNRGISRSRIDQYQGA 148

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           ++DF++AI+  P+   ++  R   R  L +   ++ D SK +E  P  A     RG+   
Sbjct: 149 LTDFSKAIELEPANAYSYYARAITRQKLNDFAGSLTDFSKVIEITPKRAQAYAGRGLSKV 208

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           +  DF  A+ DL+  ++L  E+  +Y Y   A   + +YK A   + +A+ L  +   A+
Sbjct: 209 ELNDFTGAITDLNKAIELSPEDGESYFYRAYAKGKLDDYKAALPDYERALALKPDNYRAY 268

Query: 555 GHLTQFYQDLANSEKALECLQQVL-----YIDKRF------------------------- 584
                    L + + A++   Q +     Y+D +                          
Sbjct: 269 YGRGFCRSKLGDQKGAVQDFNQAIEINNVYVDTKVVYNGRISRAILDNLRNVVQERDKIN 328

Query: 585 ------SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
                 ++AY  RG+  +  G  K AI DL+  + ++P+  E  + R     A G+ + A
Sbjct: 329 ELSAERAEAYFSRGVSKNKQGDSKAAIVDLNKAIELNPAYSEAYFSRGMIKSAQGDQKGA 388

Query: 639 IKDYDAALDLELDSMEKFVLQ-------------CLAFYQK-EIALYTASKINSEFC 681
           + D ++A+ L+    E F ++             CL   +  E+    A K+ SE+C
Sbjct: 389 LTDCNSAIKLKPGYAEVFYVRGLIKHSLGDENGGCLDLSKAGELGYNPAYKVISEYC 445



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 21/201 (10%)

Query: 327 SYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS 386
           +Y+K  + D K++     R+ L+ K D  +     A   + FC +++   K    DF  +
Sbjct: 238 AYAKGKLDDYKAALPDYERA-LALKPDNYR-----AYYGRGFCRSKLGDQKGAVQDFNQA 291

Query: 387 RGIAQVN-------EGKYASAI--SIFDQILKEDPM------YPEALIGRGTARAFQREL 431
             I  V         G+ + AI  ++ + + + D +        EA   RG ++  Q + 
Sbjct: 292 IEINNVYVDTKVVYNGRISRAILDNLRNVVQERDKINELSAERAEAYFSRGVSKNKQGDS 351

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           +AAI D  +AI+ NP+  EA+  RG  ++A G+   A+ D + A++ +P  A++ + RG+
Sbjct: 352 KAAIVDLNKAIELNPAYSEAYFSRGMIKSAQGDQKGALTDCNSAIKLKPGYAEVFYVRGL 411

Query: 492 VNFKFKDFNAAVEDLSACVKL 512
           +     D N    DLS   +L
Sbjct: 412 IKHSLGDENGGCLDLSKAGEL 432


>gi|225620520|ref|YP_002721777.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215339|gb|ACN84073.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 392

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 127/272 (46%), Gaps = 34/272 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI   + G    A+  FD+ ++ +    E    R   +A  ++ + +I D+ +AI+  
Sbjct: 82  NRGIINRSLGNTEEALKDFDKTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVY 141

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  R  ++ ALGE  EAI+D  KA+E+  +  D  + RG V  K  +FN A++D
Sbjct: 142 PHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDD 201

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + +++E    Y     A   I +YK                               
Sbjct: 202 YTNAIHINREFADGYFNRANAKFHIKDYK------------------------------- 230

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
               A+E   +++ I+ +++KAY  RG++   +  +++AIKD    + ++P+  +  Y +
Sbjct: 231 ---GAVEDFDELIKINPKYTKAYLNRGIIAMTMEAYQEAIKDFDKVIELEPNLADAHYNK 287

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           A   + +G Y EAI  Y+ A++L  +  E + 
Sbjct: 288 AVALNHLGIYDEAILYYNKAIELNPNYSESYF 319



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 134/304 (44%), Gaps = 44/304 (14%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARA--------------------------------- 460
           AI  F+E I+ + +  EA+  R  A+A                                 
Sbjct: 25  AIEYFSEVIKLDSTIYEAYYNRANAKANIDDEASYKSAVEDYTWTIKLNDQFAAAYYNRG 84

Query: 461 ----ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
               +LG + EA++D  K +E   N  ++ + R       KD+  ++ED +  +++    
Sbjct: 85  IINRSLGNTEEALKDFDKTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVYPHF 144

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY    L+ +++GEYK+A + + KAI+ + +F++A+ +     + L N  +A++    
Sbjct: 145 ADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDDYTN 204

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            ++I++ F+  Y  R      +  +K A++D    + I+P   +    R      +  Y+
Sbjct: 205 AIHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTMEAYQ 264

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEY 696
           EAIKD+D  ++LE +  +       A Y K +AL      +    +++   +++P + E 
Sbjct: 265 EAIKDFDKVIELEPNLAD-------AHYNKAVALNHLGIYDEAILYYNKAIELNPNYSES 317

Query: 697 WCKR 700
           +  R
Sbjct: 318 YFNR 321



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 9/197 (4%)

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE---YKKAEEAHLKAIQLDRNF 550
           FK K++  A+E  S  +KLD     AY     A ++I +   YK A E +   I+L+  F
Sbjct: 17  FKSKNYKLAIEYFSEVIKLDSTIYEAYYNRANAKANIDDEASYKSAVEDYTWTIKLNDQF 76

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +     + L N+E+AL+   + + ++    + Y++R      L  +K +I+D + 
Sbjct: 77  AAAYYNRGIINRSLGNTEEALKDFDKTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNK 136

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQ 665
            + + P   +  Y RA   +A+GEY+EAIKDYD A++     ++ +     V + L  + 
Sbjct: 137 AIEVYPHFADAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFN 196

Query: 666 KEIALYT-ASKINSEFC 681
           + I  YT A  IN EF 
Sbjct: 197 EAIDDYTNAIHINREFA 213



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 83/173 (47%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +R +++   G+Y  AI  +D+ ++ +  + +A   RG  +        AI D+T A
Sbjct: 146 DAYYNRALSKNALGEYKEAIKDYDKAIEYNSHFIDAYNNRGNVKEKLGNFNEAIDDYTNA 205

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I  N    + +  R  A+  + +   A++D  + ++  P        RGI+    + +  
Sbjct: 206 IHINREFADGYFNRANAKFHIKDYKGAVEDFDELIKINPKYTKAYLNRGIIAMTMEAYQE 265

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           A++D    ++L+     A+    +AL+ +G Y +A   + KAI+L+ N+ E++
Sbjct: 266 AIKDFDKVIELEPNLADAHYNKAVALNHLGIYDEAILYYNKAIELNPNYSESY 318



 Score = 42.0 bits (97), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 1/89 (1%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQAY 106
           SL N  +A++  D  +  +Y ++++   RA   + L+ +K  I D +KA+++ P    AY
Sbjct: 89  SLGNTEEALKDFDKTIELNYNLEEVYYVRANTKASLKDYKGSIEDYNKAIEVYPHFADAY 148

Query: 107 ILKGCAFSALGRKEEALSVWEKGYEHALH 135
             +  + +ALG  +EA+  ++K  E+  H
Sbjct: 149 YNRALSKNALGEYKEAIKDYDKAIEYNSH 177



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
            NR      +E ++  I+D DK ++L+P L  A+  K  A + LG  +EA+  + K  E
Sbjct: 251 LNRGIIAMTMEAYQEAIKDFDKVIELEPNLADAHYNKAVALNHLGIYDEAILYYNKAIE 309


>gi|298246522|ref|ZP_06970328.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297554003|gb|EFH87868.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 747

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 144/337 (42%), Gaps = 39/337 (11%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           ++ ++ S++      RG+ Q   G++  A+  F + L+ DP    +L G+G A    R+ 
Sbjct: 366 QVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDLVTSLNGKGVALNRLRQN 425

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALG---------------------------- 463
             A+  F  AI   P    AW  +G A +ALG                            
Sbjct: 426 RDALQSFDRAILLEPGNAVAWNGKGAALSALGLPEQALNAFDTALSFDPRMALAWSNKSL 485

Query: 464 ------ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
                 +  EA+Q   +AL +EPNSA   + +G++  +      A +     +K D    
Sbjct: 486 ILRQMRKYEEALQASEQALSYEPNSALNWNSKGLILLEMGRLREAYQAYQEALKRDSRFA 545

Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
            A   +G  L +  ++K A + + +A+Q D N+++ W    Q  Q+L N  ++LE  ++ 
Sbjct: 546 PALYGMGNVLYAQQKFKSALDNYDRALQFDPNYVKVWERRGQLLQELGNYRRSLESFERA 605

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
             ID  F+ A+  +  +L  + ++  A+      L  +PS    L  + +  + +G Y  
Sbjct: 606 TQIDPSFAPAWLGKATVLSRMERYDMALNAYEEALRRNPSLPAALNGKGNALYRLGNYSA 665

Query: 638 AIKDYDAALDLELDSM-----EKFVLQCLAFYQKEIA 669
           A+  YD AL +    +     +  +L+ L  Y + +A
Sbjct: 666 ALSAYDNALKVNPRMVSALHNKSLILKLLGRYNEALA 702



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 131/278 (47%), Gaps = 17/278 (6%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           QR +  A+  + + I+++    +AW+ RG  +A  G+  EA+Q  ++AL+ +P+    L+
Sbjct: 354 QRRVPEALKLYDQVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDLVTSLN 413

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G+   + +    A++     + L+  N  A+   G ALS++G  ++A  A   A+  D
Sbjct: 414 GKGVALNRLRQNRDALQSFDRAILLEPGNAVAWNGKGAALSALGLPEQALNAFDTALSFD 473

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
                AW + +   + +   E+AL+  +Q L  +   +  ++ +GL+L  +G+ ++A + 
Sbjct: 474 PRMALAWSNKSLILRQMRKYEEALQASEQALSYEPNSALNWNSKGLILLEMGRLREAYQA 533

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLA 662
               L  D      LY   +  +A  +++ A+ +YD AL  + + ++ +     +LQ L 
Sbjct: 534 YQEALKRDSRFAPALYGMGNVLYAQQKFKSALDNYDRALQFDPNYVKVWERRGQLLQELG 593

Query: 663 FYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            Y++ +              F+    IDP F   W  +
Sbjct: 594 NYRRSLE------------SFERATQIDPSFAPAWLGK 619



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 97/213 (45%), Gaps = 5/213 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+G+  +  G+   A   + + LK D  +  AL G G     Q++ ++A+ ++  A+Q +
Sbjct: 516 SKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSALDNYDRALQFD 575

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  + W+RRGQ    LG    +++   +A + +P+ A     +  V  + + ++ A+  
Sbjct: 576 PNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWLGKATVLSRMERYDMALNA 635

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++ +    +A    G AL  +G Y  A  A+  A++++   + A  + +   + L 
Sbjct: 636 YEEALRRNPSLPAALNGKGNALYRLGNYSAALSAYDNALKVNPRMVSALHNKSLILKLLG 695

Query: 566 NSEKALECLQQVLYI-----DKRFSKAYHLRGL 593
              +AL   +  + +     D    KA  LR L
Sbjct: 696 RYNEALAAAESAIRLAPNDPDNWLRKAEALRKL 728



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 104/267 (38%), Gaps = 36/267 (13%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A    G    A++ FD  L  DP    A   +       R+ E A+    +A+   P
Sbjct: 449 KGAALSALGLPEQALNAFDTALSFDPRMALAWSNKSLILRQMRKYEEALQASEQALSYEP 508

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           ++   W  +G     +G   EA Q   +AL+ +   A  L+  G V +  + F +A+++ 
Sbjct: 509 NSALNWNSKGLILLEMGRLREAYQAYQEALKRDSRFAPALYGMGNVLYAQQKFKSALDNY 568

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------------ 554
              ++ D      +   G  L  +G Y+++ E+  +A Q+D +F  AW            
Sbjct: 569 DRALQFDPNYVKVWERRGQLLQELGNYRRSLESFERATQIDPSFAPAWLGKATVLSRMER 628

Query: 555 -----------------------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
                                  G     Y+ L N   AL      L ++ R   A H +
Sbjct: 629 YDMALNAYEEALRRNPSLPAALNGKGNALYR-LGNYSAALSAYDNALKVNPRMVSALHNK 687

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            L+L  LG++ +A+    S + + P++
Sbjct: 688 SLILKLLGRYNEALAAAESAIRLAPND 714



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 18/144 (12%)

Query: 24  DELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQSYEIQDICNRAFC 78
           D+++R DS+ A A   R     L      +L+++++A+++   L      +  +  +   
Sbjct: 365 DQVIRTDSLNAQAWQGRGLTQALNGQHREALQSFTRALQLDPDL------VTSLNGKGVA 418

Query: 79  YSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY----EHAL 134
            ++L  ++  ++  D+A+ L+P    A+  KG A SALG  E+AL+ ++         AL
Sbjct: 419 LNRLRQNRDALQSFDRAILLEPGNAVAWNGKGAALSALGLPEQALNAFDTALSFDPRMAL 478

Query: 135 ---HQSADLKQFLELEELLTAAKQ 155
              ++S  L+Q  + EE L A++Q
Sbjct: 479 AWSNKSLILRQMRKYEEALQASEQ 502


>gi|428209080|ref|YP_007093433.1| hypothetical protein Chro_4160 [Chroococcidiopsis thermalis PCC
           7203]
 gi|428011001|gb|AFY89564.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Chroococcidiopsis thermalis PCC 7203]
          Length = 588

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 2/237 (0%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R+   KS S DF  ++G  + + G  + AI+ + Q +  +P Y +A   RG AR  Q + 
Sbjct: 263 RLENPKSAS-DF-FAKGSVERDRGDRSRAIANYTQAIARNPNYADAYYQRGNARYDQGDK 320

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + A++D+ +A++ +P+   A+ +R       G   EA+    + +   PN A   H RG 
Sbjct: 321 QGALADYDQALKFDPNYANAYYQRAVILYNRGNKQEALSSFDRYITLVPNDAQAYHSRGA 380

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           +     D     +D    V+L+ +N  AY    LA + + + K A +    A+ LD ++ 
Sbjct: 381 IRRSMGDGQGTFDDFDRVVRLEPDNSRAYYNRALARTMLRDSKGALDDFSHALNLDPSWT 440

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             + +     + L + + A++   +V+ I+ + ++A++ RGL+   LG  + AI+DL
Sbjct: 441 TVYNNRAILRRRLGDRQGAVDDFSKVISIEPKNAEAHYNRGLVRRDLGDRQGAIEDL 497



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 116/239 (48%)

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
           E+P        +G+    + +   AI+++T+AI  NP+  +A+ +RG AR   G+   A+
Sbjct: 265 ENPKSASDFFAKGSVERDRGDRSRAIANYTQAIARNPNYADAYYQRGNARYDQGDKQGAL 324

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
            D  +AL+F+PN A+  ++R ++ +   +   A+      + L   +  AY   G    S
Sbjct: 325 ADYDQALKFDPNYANAYYQRAVILYNRGNKQEALSSFDRYITLVPNDAQAYHSRGAIRRS 384

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +G+ +   +   + ++L+ +   A+ +       L +S+ AL+     L +D  ++  Y+
Sbjct: 385 MGDGQGTFDDFDRVVRLEPDNSRAYYNRALARTMLRDSKGALDDFSHALNLDPSWTTVYN 444

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            R +L   LG  + A+ D S  + I+P N E  Y R      +G+ + AI+D   A ++
Sbjct: 445 NRAILRRRLGDRQGAVDDFSKVISIEPKNAEAHYNRGLVRRDLGDRQGAIEDLQLAANI 503



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 92/210 (43%)

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP +   +  +G      G+   AI + ++A+   PN AD  ++RG   +   D   A+ 
Sbjct: 266 NPKSASDFFAKGSVERDRGDRSRAIANYTQAIARNPNYADAYYQRGNARYDQGDKQGALA 325

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    +K D    +AY    + L + G  ++A  +  + I L  N  +A+       + +
Sbjct: 326 DYDQALKFDPNYANAYYQRAVILYNRGNKQEALSSFDRYITLVPNDAQAYHSRGAIRRSM 385

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + +   +   +V+ ++   S+AY+ R L    L   K A+ D S  L +DPS       
Sbjct: 386 GDGQGTFDDFDRVVRLEPDNSRAYYNRALARTMLRDSKGALDDFSHALNLDPSWTTVYNN 445

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSME 654
           RA     +G+ + A+ D+   + +E  + E
Sbjct: 446 RAILRRRLGDRQGAVDDFSKVISIEPKNAE 475



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 64/137 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG  + + G        FD++++ +P    A   R  AR   R+ + A+ DF+ A+  +
Sbjct: 377 SRGAIRRSMGDGQGTFDDFDRVVRLEPDNSRAYYNRALARTMLRDSKGALDDFSHALNLD 436

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           PS    +  R   R  LG+   A+ D SK +  EP +A+  + RG+V     D   A+ED
Sbjct: 437 PSWTTVYNNRAILRRRLGDRQGAVDDFSKVISIEPKNAEAHYNRGLVRRDLGDRQGAIED 496

Query: 506 LSACVKLDKENKSAYTY 522
           L     + ++   +  Y
Sbjct: 497 LQLAANIFQQKNDSTNY 513


>gi|325959264|ref|YP_004290730.1| hypothetical protein Metbo_1528 [Methanobacterium sp. AL-21]
 gi|325330696|gb|ADZ09758.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. AL-21]
          Length = 329

 Score = 96.3 bits (238), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 138/307 (44%), Gaps = 30/307 (9%)

Query: 417 ALIGRGTARAFQRELEAAI--SDFTEAIQSNPSAGE-------AWKRRGQARAALGESVE 467
            L  R   +   +E++      ++ EA++ N    E       AW   G     L +  E
Sbjct: 2   GLFNRSKKKLLFKEVKNFFKEGNYQEALEKNDKFLEIDSKNETAWIYNGLIYEKLEQYPE 61

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AI+   KALE  P +A     +G++    + F+ A+E  +  +K D +   ++   G+ L
Sbjct: 62  AIESYDKALEINPKNALTWFYKGLILTNLEKFSEAIESYNTSIKYDSKIIGSWINKGVLL 121

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
           + +G Y++A E   K ++LD     AW +     ++L    +A+EC + V+ I+ +   +
Sbjct: 122 NELGNYQEAIECQNKVLELDPQNETAWINKGLILEELGKYSEAIECFENVIRINPKNLDS 181

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
              +G+LL  L  +++AI   +  L  DP N +    + +    +G+  EA+K YD AL+
Sbjct: 182 LFKKGVLLGNLKNYQEAINCYNKVLERDPKNADSWNNKGATQAMLGKKDEALKSYDKALE 241

Query: 648 L---ELDSMEK--FVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLH 702
           +   E D+      +L     YQK I LY            DI  +IDP F + W    H
Sbjct: 242 INPKEADTWNNKALILSNQEKYQKSIELY------------DISIEIDPNFNDAW----H 285

Query: 703 PKNVCEK 709
            K V  K
Sbjct: 286 NKGVALK 292



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 112/232 (48%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+   N  K++ AI  ++  +K D     + I +G         + AI    + ++ +P
Sbjct: 83  KGLILTNLEKFSEAIESYNTSIKYDSKIIGSWINKGVLLNELGNYQEAIECQNKVLELDP 142

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  +G     LG+  EAI+     +   P + D L ++G++    K++  A+   
Sbjct: 143 QNETAWINKGLILEELGKYSEAIECFENVIRINPKNLDSLFKKGVLLGNLKNYQEAINCY 202

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++ D +N  ++   G   + +G+  +A +++ KA++++    + W +      +   
Sbjct: 203 NKVLERDPKNADSWNNKGATQAMLGKKDEALKSYDKALEINPKEADTWNNKALILSNQEK 262

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            +K++E     + ID  F+ A+H +G+ L  LG+H++A+K     L +DP++
Sbjct: 263 YQKSIELYDISIEIDPNFNDAWHNKGVALKALGKHEEALKCFDKVLELDPTD 314



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 34/211 (16%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +++G+     GKY+ AI  F+ +++ +P   ++L  +G      +  + AI+ + + ++ 
Sbjct: 149 INKGLILEELGKYSEAIECFENVIRINPKNLDSLFKKGVLLGNLKNYQEAINCYNKVLER 208

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P   ++W  +G  +A LG+  EA++   KALE  P  AD  + + ++            
Sbjct: 209 DPKNADSWNNKGATQAMLGKKDEALKSYDKALEINPKEADTWNNKALI------------ 256

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                                 LS+  +Y+K+ E +  +I++D NF +AW +     + L
Sbjct: 257 ----------------------LSNQEKYQKSIELYDISIEIDPNFNDAWHNKGVALKAL 294

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
              E+AL+C  +VL +D    KA  L+  +L
Sbjct: 295 GKHEEALKCFDKVLELDPTDEKAKRLKNEIL 325



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/123 (19%), Positives = 59/123 (47%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C   + +    ++D    +G+   N   Y  AI+ ++++L+ DP   ++   +G  +A  
Sbjct: 167 CFENVIRINPKNLDSLFKKGVLLGNLKNYQEAINCYNKVLERDPKNADSWNNKGATQAML 226

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + A+  + +A++ NP   + W  +    +   +  ++I+    ++E +PN  D  H 
Sbjct: 227 GKKDEALKSYDKALEINPKEADTWNNKALILSNQEKYQKSIELYDISIEIDPNFNDAWHN 286

Query: 489 RGI 491
           +G+
Sbjct: 287 KGV 289


>gi|225851470|ref|YP_002731704.1| TPR Domain containing protein [Persephonella marina EX-H1]
 gi|225644946|gb|ACO03132.1| TPR Domain containing protein [Persephonella marina EX-H1]
          Length = 345

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 66/220 (30%), Positives = 114/220 (51%), Gaps = 1/220 (0%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G A   + + E AI  +T+AI+  P    A+  RG A   +G+  EA+++ ++A+   P 
Sbjct: 100 GYAYFLKGDPEKAIKCYTKAIEIKPDLAVAYYNRGLAFKKMGDYDEAVKNYNRAIALNPE 159

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
             D  +  GIV     D   AV      ++++ EN++ Y  LG     + +YKKA E + 
Sbjct: 160 DPDYYYNLGIVYRIKGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDMKDYKKAVECYK 219

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KA++++  F   W +L   Y D+ + EKA++  ++ L IDKR ++ Y   G+ L  LG++
Sbjct: 220 KAVEINPLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSAECYMDMGIALKELGRY 279

Query: 602 KKAIKDLSSGLGIDPS-NIECLYLRASCYHAIGEYREAIK 640
            +A+K       I+P      LY +A  Y + G+  +A+K
Sbjct: 280 DEALKAYEKAEQINPDLKALSLYNKACLYASKGDKEKALK 319



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 80/314 (25%), Positives = 142/314 (45%), Gaps = 11/314 (3%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L + +   + G    A  +  + +  D   PE+    G+    +   E A+    +A++ 
Sbjct: 30  LYKAVIHFHTGNNIKAKELLKKYINLDKNNPESYYYLGSIYLEEGNPEKAVKYLKKAVEK 89

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
              A E +   G A    G+  +AI+  +KA+E +P+ A   + RG+   K  D++ AV+
Sbjct: 90  GKKA-EYFNDLGYAYFLKGDPEKAIKCYTKAIEIKPDLAVAYYNRGLAFKKMGDYDEAVK 148

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           + +  + L+ E+   Y  LG+     G+ +KA   + KAI+++      + +L   Y D+
Sbjct: 149 NYNRAIALNPEDPDYYYNLGIVYRIKGDLQKAVNCYKKAIEINPENENYYNNLGNVYYDM 208

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + +KA+EC ++ + I+  F   +   G     +G ++KA+K     L ID  + EC   
Sbjct: 209 KDYKKAVECYKKAVEINPLFFLGWQNLGNTYLDMGDYEKAVKAFKKALKIDKRSAECYMD 268

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSE--FCW 682
                  +G Y EA+K Y+ A  +  D      L+ L+ Y K  A   ASK + E     
Sbjct: 269 MGIALKELGRYDEALKAYEKAEQINPD------LKALSLYNK--ACLYASKGDKEKALKL 320

Query: 683 FDIDGDIDPLFKEY 696
                 IDP  K+Y
Sbjct: 321 LKESFSIDPSLKDY 334


>gi|386398767|ref|ZP_10083545.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. WSM1253]
 gi|385739393|gb|EIG59589.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
           [Bradyrhizobium sp. WSM1253]
          Length = 461

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 5/200 (2%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG     QR L+ A++D+ +AI+  P   +AW  RG      G++  AI+DLS+AL  +P
Sbjct: 147 RGVVYTNQRRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNENAIRDLSEALRLDP 206

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N       RG    K      +V D    ++LD +    Y   GL+L+++GEY KA   +
Sbjct: 207 NRPRSYTNRGAAYKKLGQLERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADY 266

Query: 541 LKAIQL--DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
            +A++L    NF    G       +L     AL   +  L ++  F++ Y+ R +L   +
Sbjct: 267 DQALRLAPRPNFFANRGDSYHLKGELG---AALSDYEAALKLEPNFAQTYNNRAVLYKKM 323

Query: 599 GQHKKAIKDLSSGLGIDPSN 618
           G+ KKA+ D  + L +DP N
Sbjct: 324 GERKKALADYETALRLDPGN 343



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 1/187 (0%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           G   +A++D+ +A+  +  +A     RG ++     D N A  DLS  ++L+ ++  +Y 
Sbjct: 86  GGLTQALRDIDRAIALDGKNAKAWRLRGDLLREAGGDLNRAAADLSKAIELNPQDSESYE 145

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G+  ++     +A   + +AI+L  +  +AW      Y    ++E A+  L + L +D
Sbjct: 146 LRGVVYTNQRRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNENAIRDLSEALRLD 205

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
               ++Y  RG     LGQ ++++ D    + +DP   E    R     A+GEY +AI D
Sbjct: 206 PNRPRSYTNRGAAYKKLGQLERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIAD 265

Query: 642 YDAALDL 648
           YD AL L
Sbjct: 266 YDQALRL 272



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 33/166 (19%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+     G   +AI    + L+ DP  P +   RG A     +LE +++D  EAI+ +P
Sbjct: 181 RGVTYYLGGDNENAIRDLSEALRLDPNRPRSYTNRGAAYKKLGQLERSVADDGEAIRLDP 240

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKAL------------------------------ 476
              E +  RG + AA+GE  +AI D  +AL                              
Sbjct: 241 KVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFANRGDSYHLKGELGAALSDYE 300

Query: 477 ---EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              + EPN A   + R ++  K  +   A+ D    ++LD  N +A
Sbjct: 301 AALKLEPNFAQTYNNRAVLYKKMGERKKALADYETALRLDPGNDNA 346



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 7/194 (3%)

Query: 502 AVEDLSACVKLDKENKSAYTYLG-LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           A+ D+   + LD +N  A+   G L   + G+  +A     KAI+L+    E++      
Sbjct: 91  ALRDIDRAIALDGKNAKAWRLRGDLLREAGGDLNRAAADLSKAIELNPQDSESYELRGVV 150

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y +    ++AL    Q + +    ++A+  RG+  +  G ++ AI+DLS  L +DP+   
Sbjct: 151 YTNQRRLDRALADYDQAIKLKPDNAQAWSDRGVTYYLGGDNENAIRDLSEALRLDPNRPR 210

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TAS 674
               R + Y  +G+   ++ D   A+ L+    E +      L  +  Y K IA Y  A 
Sbjct: 211 SYTNRGAAYKKLGQLERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQAL 270

Query: 675 KINSEFCWFDIDGD 688
           ++     +F   GD
Sbjct: 271 RLAPRPNFFANRGD 284


>gi|434386918|ref|YP_007097529.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
 gi|428017908|gb|AFY94002.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
          Length = 376

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 130/289 (44%), Gaps = 3/289 (1%)

Query: 363 KRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
           ++N    +   S++  ++ +F     +R IA    G    AI  +D+++K +P    +  
Sbjct: 64  QKNYTGAIADFSQAIQLAPNFEKAIYNRAIAYDLSGDRQKAIDNYDRVIKLNPQSANSYF 123

Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
            R  A+A   + + A+SD+   I+  P + +A+  RG    A G+   AI D S+ L  +
Sbjct: 124 NRAVAKAKFGDKQGALSDYKRVIEIEPKSTDAYLNRGNLLQASGDITGAIADFSQILNLQ 183

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           PN AD    RG+  ++  D   A+ D    ++ +     AY     A + +G+ + A   
Sbjct: 184 PNRADAYLNRGLAKYQSGDRQGAIADYDLAIEANPTYHLAYNNRAWAKADLGDNRGAMAD 243

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
           + +AIQL+ N+  ++       + L +   A+    + + +   ++  Y+ RGL    + 
Sbjct: 244 YDRAIQLNSNYYLSYYSRANLRRTLGDESGAITDYDKSIQLKPDYAFGYNNRGLARRKIQ 303

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
               A KD +  + +DP+  E  Y R +   A+ E   A+ D   A  L
Sbjct: 304 DLAGATKDFTKAIELDPNFAEAYYNRGTARQALKERGGAVSDLKTAAQL 352



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 104/236 (44%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E L   G  +  Q+    AI+DF++AIQ  P+  +A   R  A    G+  +AI +  + 
Sbjct: 52  EELFNSGNQKLIQKNYTGAIADFSQAIQLAPNFEKAIYNRAIAYDLSGDRQKAIDNYDRV 111

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           ++  P SA+    R +   KF D   A+ D    ++++ ++  AY   G  L + G+   
Sbjct: 112 IKLNPQSANSYFNRAVAKAKFGDKQGALSDYKRVIEIEPKSTDAYLNRGNLLQASGDITG 171

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A     + + L  N  +A+ +         + + A+      +  +  +  AY+ R    
Sbjct: 172 AIADFSQILNLQPNRADAYLNRGLAKYQSGDRQGAIADYDLAIEANPTYHLAYNNRAWAK 231

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
             LG ++ A+ D    + ++ +     Y RA+    +G+   AI DYD ++ L+ D
Sbjct: 232 ADLGDNRGAMADYDRAIQLNSNYYLSYYSRANLRRTLGDESGAITDYDKSIQLKPD 287



 Score = 43.5 bits (101), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 61/124 (49%)

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +AIQL  NF +A  +    Y    + +KA++   +V+ ++ + + +Y  R +     G  
Sbjct: 76  QAIQLAPNFEKAIYNRAIAYDLSGDRQKAIDNYDRVIKLNPQSANSYFNRAVAKAKFGDK 135

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           + A+ D    + I+P + +    R +   A G+   AI D+   L+L+ +  + ++ + L
Sbjct: 136 QGALSDYKRVIEIEPKSTDAYLNRGNLLQASGDITGAIADFSQILNLQPNRADAYLNRGL 195

Query: 662 AFYQ 665
           A YQ
Sbjct: 196 AKYQ 199


>gi|254409523|ref|ZP_05023304.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196183520|gb|EDX78503.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 385

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 158/344 (45%), Gaps = 11/344 (3%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           +I+++ S  +   L++G++ +  G YA A+  +DQ ++ +    +A +GRG A     + 
Sbjct: 47  QIAQTPSRELVNWLNKGMSLIKAGNYAEAVKAYDQAIEINGESADAWMGRGFALYGLEKY 106

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             A++ F +A + +PS   AW   G A    G+  +A+    +AL+  PNS      RGI
Sbjct: 107 PEAVTAFNQATELDPSLVGAWVGLGMALDDTGKPEDALAAYDQALKVNPNSDWAWFHRGI 166

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
              + +    A+E     V++D + + A+   G  L  +  Y +AE +  + ++++ N  
Sbjct: 167 TLGRLERDQEALEAYDQAVRIDPDYERAWFNRGYILVELERYPEAETSFAEVVRINPNSE 226

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL-SS 610
             W        ++  +  AL+  ++VL I+   + A++ +G++L  L     AI  +   
Sbjct: 227 PGWFMRGLALLEMEQNNTALKAFERVLLINPENANAWYNKGIILENLDGDDWAIFTVFDR 286

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
            + + P +    + R +    +  Y +A+  YD  L+LE DS        + +Y + IAL
Sbjct: 287 VVQLIPDDAGGWFKRGNALLRLDRYADALNSYDRMLELEPDS-------EVGWYNRGIAL 339

Query: 671 YTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQP 714
               + +     FD    I+P   E    + H   + E V +QP
Sbjct: 340 ALLERYHDAIASFDEALRINPNNTE---AKEHRDKLQELVQQQP 380



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 7/226 (3%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEA-WKRRGQARAALGESVEAIQDLSKALEFEP 480
           GT   +  ELE         I   PS     W  +G +    G   EA++   +A+E   
Sbjct: 34  GTPNPYMLELE------NPQIAQTPSRELVNWLNKGMSLIKAGNYAEAVKAYDQAIEING 87

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            SAD    RG   +  + +  AV   +   +LD     A+  LG+AL   G+ + A  A+
Sbjct: 88  ESADAWMGRGFALYGLEKYPEAVTAFNQATELDPSLVGAWVGLGMALDDTGKPEDALAAY 147

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +A++++ N   AW H       L   ++ALE   Q + ID  + +A+  RG +L  L +
Sbjct: 148 DQALKVNPNSDWAWFHRGITLGRLERDQEALEAYDQAVRIDPDYERAWFNRGYILVELER 207

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           + +A    +  + I+P++    ++R      + +   A+K ++  L
Sbjct: 208 YPEAETSFAEVVRINPNSEPGWFMRGLALLEMEQNNTALKAFERVL 253


>gi|432328071|ref|YP_007246215.1| tetratricopeptide repeat protein [Aciduliprofundum sp. MAR08-339]
 gi|432134780|gb|AGB04049.1| tetratricopeptide repeat protein [Aciduliprofundum sp. MAR08-339]
          Length = 596

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 135/284 (47%), Gaps = 13/284 (4%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDP------MYPEALIGRGT 423
           V R    K  + +F+    +A VN   Y  A  +  +++K+        +      GRG 
Sbjct: 95  VIRAGLKKFKNENFQYLSAVALVNAEDYNLAEKVLRELMKKGAKDLHFVVLGNIYFGRG- 153

Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
                 E E A+  +  A++ NP   EAW  +G     LG   EA++   +ALE EP+  
Sbjct: 154 ------EKEKALEFYDRALEENPENVEAWNNKGFLLFTLGLYEEALKCYDRALEIEPSYK 207

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
           +  + RG  +      +AAV D    +++D  ++ A+  +G AL ++  Y ++    +K+
Sbjct: 208 EAWYNRGYTHHAMGQLSAAVADYWHALRIDSRDEIAWNNMGNALYNLKHYMESIPYFMKS 267

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
           + ++ N+  AW ++      +   + ++   ++ L I+ +F  A+H +G  L  LG++++
Sbjct: 268 VSVNPNYEIAWNNIGNALDRMHMHKYSIPFHEKALSINPKFDYAWHAKGHALCELGKYEE 327

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           A++ L + + +DP   E  Y R    + +  Y EAI+    A++
Sbjct: 328 ALECLENAIDLDPDYGETWYWRGLALYKLERYEEAIESLKIAME 371



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 119/253 (47%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+   A+  +D+ L+E+P   EA   +G         E A+  +  A++  PS  EAW  
Sbjct: 153 GEKEKALEFYDRALEENPENVEAWNNKGFLLFTLGLYEEALKCYDRALEIEPSYKEAWYN 212

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG    A+G+   A+ D   AL  +       +  G   +  K +  ++      V ++ 
Sbjct: 213 RGYTHHAMGQLSAAVADYWHALRIDSRDEIAWNNMGNALYNLKHYMESIPYFMKSVSVNP 272

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
             + A+  +G AL  +  +K +   H KA+ ++  F  AW        +L   E+ALECL
Sbjct: 273 NYEIAWNNIGNALDRMHMHKYSIPFHEKALSINPKFDYAWHAKGHALCELGKYEEALECL 332

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           +  + +D  + + ++ RGL L+ L ++++AI+ L   +  D + ++   L    Y  +G 
Sbjct: 333 ENAIDLDPDYGETWYWRGLALYKLERYEEAIESLKIAMERDTTLVKAPELIGDIYDFLGY 392

Query: 635 YREAIKDYDAALD 647
             E++K Y+ AL+
Sbjct: 393 PTESVKYYEIALN 405



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 124/298 (41%), Gaps = 26/298 (8%)

Query: 425 RAFQRELEA----AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RA +  +E     AIS    A++ NP   E W   G A  A+GE   A     K L   P
Sbjct: 11  RALELMMEGYYREAISHLEIALKKNPDNYEIWFYLGNAYYAVGEYKRARSSYLKVLSLNP 70

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL-GLALSSIGEYKKAEEA 539
           +  ++      +  +  +   A   + A +K  K     + YL  +AL +  +Y  AE+ 
Sbjct: 71  SFPEVYLSLANLYVRMGNLKRARRVIRAGLK--KFKNENFQYLSAVALVNAEDYNLAEKV 128

Query: 540 H---LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
               +K    D +F+     L   Y      EKALE   + L  +    +A++ +G LL 
Sbjct: 129 LRELMKKGAKDLHFVV----LGNIYFGRGEKEKALEFYDRALEENPENVEAWNNKGFLLF 184

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            LG +++A+K     L I+PS  E  Y R   +HA+G+   A+ DY  A  L +DS ++ 
Sbjct: 185 TLGLYEEALKCYDRALEIEPSYKEAWYNRGYTHHAMGQLSAAVADYWHA--LRIDSRDEI 242

Query: 657 -------VLQCLAFYQKEIALYTAS---KINSEFCWFDIDGDIDPLFKEYWCKRLHPK 704
                   L  L  Y + I  +  S     N E  W +I   +D +    +    H K
Sbjct: 243 AWNNMGNALYNLKHYMESIPYFMKSVSVNPNYEIAWNNIGNALDRMHMHKYSIPFHEK 300



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 4/235 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  + R +  + EG Y  AIS  +  LK++P   E     G A     E + A S + + 
Sbjct: 6   DVEIDRALELMMEGYYREAISHLEIALKKNPDNYEIWFYLGNAYYAVGEYKRARSSYLKV 65

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL-EFEPNSADILHERGIVNFKFKDFN 500
           +  NPS  E +         +G    A + +   L +F+  +   L    +VN   +D+N
Sbjct: 66  LSLNPSFPEVYLSLANLYVRMGNLKRARRVIRAGLKKFKNENFQYLSAVALVN--AEDYN 123

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A + L   +K   ++   +  LG      GE +KA E + +A++ +   +EAW +    
Sbjct: 124 LAEKVLRELMKKGAKDLH-FVVLGNIYFGRGEKEKALEFYDRALEENPENVEAWNNKGFL 182

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
              L   E+AL+C  + L I+  + +A++ RG   H +GQ   A+ D    L ID
Sbjct: 183 LFTLGLYEEALKCYDRALEIEPSYKEAWYNRGYTHHAMGQLSAAVADYWHALRID 237



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 34/202 (16%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G      G Y  A+  +D+ L+ +P Y EA   RG       +L AA++D+  A++ +
Sbjct: 178 NKGFLLFTLGLYEEALKCYDRALEIEPSYKEAWYNRGYTHHAMGQLSAAVADYWHALRID 237

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS-------------------ADIL 486
                AW   G A   L   +E+I    K++   PN                    +   
Sbjct: 238 SRDEIAWNNMGNALYNLKHYMESIPYFMKSVSVNPNYEIAWNNIGNALDRMHMHKYSIPF 297

Query: 487 HERGI-VNFKFK--------------DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
           HE+ + +N KF                +  A+E L   + LD +    + + GLAL  + 
Sbjct: 298 HEKALSINPKFDYAWHAKGHALCELGKYEEALECLENAIDLDPDYGETWYWRGLALYKLE 357

Query: 532 EYKKAEEAHLKAIQLDRNFLEA 553
            Y++A E+   A++ D   ++A
Sbjct: 358 RYEEAIESLKIAMERDTTLVKA 379



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 7/156 (4%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A  N   Y  +I  F + +  +P Y  A    G A       + +I    +A+  NP 
Sbjct: 248 GNALYNLKHYMESIPYFMKSVSVNPNYEIAWNNIGNALDRMHMHKYSIPFHEKALSINPK 307

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              AW  +G A   LG+  EA++ L  A++ +P+  +  + RG+  +K + +  A+E L 
Sbjct: 308 FDYAWHAKGHALCELGKYEEALECLENAIDLDPDYGETWYWRGLALYKLERYEEAIESLK 367

Query: 508 ACVKLDKENKSA-------YTYLGLALSSIGEYKKA 536
             ++ D     A       Y +LG    S+  Y+ A
Sbjct: 368 IAMERDTTLVKAPELIGDIYDFLGYPTESVKYYEIA 403


>gi|427721153|ref|YP_007069147.1| serine/threonine protein kinase [Calothrix sp. PCC 7507]
 gi|427353589|gb|AFY36313.1| serine/threonine protein kinase [Calothrix sp. PCC 7507]
          Length = 709

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 139/281 (49%), Gaps = 5/281 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  A++ +D+ ++  P Y EA  GRG +    +  + AI+ F +A+Q   +  E W  +
Sbjct: 379 KYKEALAAYDKAIQIQPEYLEAWSGRGFSLKNLQRYQEAIASFDKALQLKNNYPEVWLAK 438

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           GQA + L +   AI+   KA++ + +S +  + +G      K ++ A+      V+   +
Sbjct: 439 GQALSNLNQYENAIKSYDKAIDLKQDSYEAWYNKGWALHNLKRYDEAIAAYDKAVEFKPD 498

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
            + A+   G AL ++  Y+ A  A+ +A++  +N+ +AW        +L    +A+E   
Sbjct: 499 YEQAWYNRGNALVNLQRYEDAFTAYNQAVRYKQNYYQAWLSRGNILVNLRRYPEAIESFN 558

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           QV+  +    +A++ RG  LH   ++++A++  +  + +  ++ +  Y   +  + + +Y
Sbjct: 559 QVIKYNTDSYQAWYSRGWSLHQSQRYEEAVQSYNKAIAVKQNDYQAWYGLGNSLYVLQKY 618

Query: 636 REAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
            +AI  Y+ A+  ++D  E +      L  L  Y + IA Y
Sbjct: 619 EQAIAAYNRAVRYKVDHYESWYSRGNALVNLQRYPEAIASY 659



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/296 (21%), Positives = 137/296 (46%), Gaps = 8/296 (2%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A++++++ +   P Y +   G+G +     + + A++ + +AIQ  P   EAW  R
Sbjct: 345 RYQDALAVYEKAVDIRPDYAQGWYGQGKSLYELNKYKEALAAYDKAIQIQPEYLEAWSGR 404

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G +   L    EAI    KAL+ + N  ++   +G        +  A++     + L ++
Sbjct: 405 GFSLKNLQRYQEAIASFDKALQLKNNYPEVWLAKGQALSNLNQYENAIKSYDKAIDLKQD 464

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +  A+   G AL ++  Y +A  A+ KA++   ++ +AW +      +L   E A     
Sbjct: 465 SYEAWYNKGWALHNLKRYDEAIAAYDKAVEFKPDYEQAWYNRGNALVNLQRYEDAFTAYN 524

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           Q +   + + +A+  RG +L  L ++ +AI+  +  +  +  + +  Y R    H    Y
Sbjct: 525 QAVRYKQNYYQAWLSRGNILVNLRRYPEAIESFNQVIKYNTDSYQAWYSRGWSLHQSQRY 584

Query: 636 REAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIALYTAS---KINSEFCWF 683
            EA++ Y+ A+ ++ +  + +      L  L  Y++ IA Y  +   K++    W+
Sbjct: 585 EEAVQSYNKAIAVKQNDYQAWYGLGNSLYVLQKYEQAIAAYNRAVRYKVDHYESWY 640



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 109/234 (46%), Gaps = 4/234 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           L++G A  N  +Y +AI  +D+   LK+D    EA   +G A    +  + AI+ + +A+
Sbjct: 436 LAKGQALSNLNQYENAIKSYDKAIDLKQDSY--EAWYNKGWALHNLKRYDEAIAAYDKAV 493

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +  P   +AW  RG A   L    +A    ++A+ ++ N       RG +    + +  A
Sbjct: 494 EFKPDYEQAWYNRGNALVNLQRYEDAFTAYNQAVRYKQNYYQAWLSRGNILVNLRRYPEA 553

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +E  +  +K + ++  A+   G +L     Y++A +++ KAI + +N  +AW  L     
Sbjct: 554 IESFNQVIKYNTDSYQAWYSRGWSLHQSQRYEEAVQSYNKAIAVKQNDYQAWYGLGNSLY 613

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
            L   E+A+    + +       ++++ RG  L  L ++ +AI   +  +   P
Sbjct: 614 VLQKYEQAIAAYNRAVRYKVDHYESWYSRGNALVNLQRYPEAIASYAKAIKYKP 667



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/171 (24%), Positives = 79/171 (46%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N+A  L+ +G   F  + +  A+      V +  +    +   G +L  + +YK+A  A+
Sbjct: 328 NNATDLYNQGNTLFDLQRYQDALAVYEKAVDIRPDYAQGWYGQGKSLYELNKYKEALAAY 387

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            KAIQ+   +LEAW       ++L   ++A+    + L +   + + +  +G  L  L Q
Sbjct: 388 DKAIQIQPEYLEAWSGRGFSLKNLQRYQEAIASFDKALQLKNNYPEVWLAKGQALSNLNQ 447

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           ++ AIK     + +   + E  Y +    H +  Y EAI  YD A++ + D
Sbjct: 448 YENAIKSYDKAIDLKQDSYEAWYNKGWALHNLKRYDEAIAAYDKAVEFKPD 498



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 13/212 (6%)

Query: 355 LKETSNEAKRNKKFCVTRISK------SKSISVDFR-------LSRGIAQVNEGKYASAI 401
           LK+ S EA  NK + +  + +      +   +V+F+        +RG A VN  +Y  A 
Sbjct: 461 LKQDSYEAWYNKGWALHNLKRYDEAIAAYDKAVEFKPDYEQAWYNRGNALVNLQRYEDAF 520

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           + ++Q ++    Y +A + RG      R    AI  F + I+ N  + +AW  RG +   
Sbjct: 521 TAYNQAVRYKQNYYQAWLSRGNILVNLRRYPEAIESFNQVIKYNTDSYQAWYSRGWSLHQ 580

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
                EA+Q  +KA+  + N     +  G   +  + +  A+   +  V+   ++  ++ 
Sbjct: 581 SQRYEEAVQSYNKAIAVKQNDYQAWYGLGNSLYVLQKYEQAIAAYNRAVRYKVDHYESWY 640

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
             G AL ++  Y +A  ++ KAI+   ++ +A
Sbjct: 641 SRGNALVNLQRYPEAIASYAKAIKYKPDYQQA 672


>gi|427710065|ref|YP_007052442.1| pentapeptide repeat-containing protein [Nostoc sp. PCC 7107]
 gi|427362570|gb|AFY45292.1| pentapeptide repeat protein [Nostoc sp. PCC 7107]
          Length = 575

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 120/250 (48%), Gaps = 34/250 (13%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G+Y +AI+ +++ ++ +    +    RG A++  +  +AAI+D+ +AI+ +P+ G+A+ 
Sbjct: 301 KGRYPNAIAYYNKAIELNSRDAQTYTSRGFAQSKLKNYQAAIADYNKAIEIDPNYGKAYS 360

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG  R    +   A+ D  +A+  + N+A+  + R  +    KD+ A + + S  ++++
Sbjct: 361 NRGLTRIEQNDYPSALTDFDQAIRLDSNNAEAYNGRATIRRMQKDYAAVITEASQAIRIN 420

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +  +AY   GLA S++ +Y+ A + + KAI  D +   AW +L                
Sbjct: 421 PKFAAAYNNRGLARSALQDYQSAIQDYDKAI--DNSSGWAWAYLN--------------- 463

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
                            RGL    + QHK A KD    + ID + IE  Y R+       
Sbjct: 464 -----------------RGLARSAISQHKDATKDFDRAIEIDENYIEAYYQRSVARFNRK 506

Query: 634 EYREAIKDYD 643
           +Y +AIKD D
Sbjct: 507 KYEDAIKDCD 516



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 114/221 (51%), Gaps = 4/221 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG AQ     Y +AI+ +++ ++ DP Y +A   RG  R  Q +  +A++DF +AI+ +
Sbjct: 327 SRGFAQSKLKNYQAAIADYNKAIEIDPNYGKAYSNRGLTRIEQNDYPSALTDFDQAIRLD 386

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  EA+  R   R    +    I + S+A+   P  A   + RG+     +D+ +A++D
Sbjct: 387 SNNAEAYNGRATIRRMQKDYAAVITEASQAIRINPKFAAAYNNRGLARSALQDYQSAIQD 446

Query: 506 LSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
               +  D  +  A+ YL  GLA S+I ++K A +   +AI++D N++EA+   +    +
Sbjct: 447 YDKAI--DNSSGWAWAYLNRGLARSAISQHKDATKDFDRAIEIDENYIEAYYQRSVARFN 504

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
               E A++   +++  D  ++ AY  +G  L  L +  +A
Sbjct: 505 RKKYEDAIKDCDRIIQRDPNYAAAYENKGNALLALKKKPEA 545



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 85/152 (55%), Gaps = 4/152 (2%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK--R 454
           YA+ I+   Q ++ +P +  A   RG AR+  ++ ++AI D+ +AI +  S+G AW    
Sbjct: 406 YAAVITEASQAIRINPKFAAAYNNRGLARSALQDYQSAIQDYDKAIDN--SSGWAWAYLN 463

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG AR+A+ +  +A +D  +A+E + N  +  ++R +  F  K +  A++D    ++ D 
Sbjct: 464 RGLARSAISQHKDATKDFDRAIEIDENYIEAYYQRSVARFNRKKYEDAIKDCDRIIQRDP 523

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
              +AY   G AL ++ +  +A+ A  +A++L
Sbjct: 524 NYAAAYENKGNALLALKKKPEAKLAFEQAMKL 555



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 35/200 (17%)

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           AG+ + R G   ++ G    AI   +KA+E     A     RG    K K++ AA+ D +
Sbjct: 288 AGD-YSRWGNTLSSKGRYPNAIAYYNKAIELNSRDAQTYTSRGFAQSKLKNYQAAIADYN 346

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +++D     AY+  GL      +Y  A     +AI+LD N  EA+       +   + 
Sbjct: 347 KAIEIDPNYGKAYSNRGLTRIEQNDYPSALTDFDQAIRLDSNNAEAYNGRATIRRMQKDY 406

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
              +    Q + I+ +F+ AY+ RGL                                  
Sbjct: 407 AAVITEASQAIRINPKFAAAYNNRGL---------------------------------- 432

Query: 628 CYHAIGEYREAIKDYDAALD 647
              A+ +Y+ AI+DYD A+D
Sbjct: 433 ARSALQDYQSAIQDYDKAID 452



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 49/94 (52%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG+A+    ++  A   FD+ ++ D  Y EA   R  AR  +++ E AI D    IQ 
Sbjct: 462 LNRGLARSAISQHKDATKDFDRAIEIDENYIEAYYQRSVARFNRKKYEDAIKDCDRIIQR 521

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
           +P+   A++ +G A  AL +  EA     +A++ 
Sbjct: 522 DPNYAAAYENKGNALLALKKKPEAKLAFEQAMKL 555



 Score = 41.2 bits (95), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 11/128 (8%)

Query: 9   SRYRLNKTHKTICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLL 63
           +R   N     + + D+ +R+DS  A A   R  + ++       +   S+AIRI +   
Sbjct: 365 TRIEQNDYPSALTDFDQAIRLDSNNAEAYNGRATIRRMQKDYAAVITEASQAIRI-NPKF 423

Query: 64  AQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           A +Y      NR    S L+ ++  I+D DKA+        AY+ +G A SA+ + ++A 
Sbjct: 424 AAAYN-----NRGLARSALQDYQSAIQDYDKAIDNSSGWAWAYLNRGLARSAISQHKDAT 478

Query: 124 SVWEKGYE 131
             +++  E
Sbjct: 479 KDFDRAIE 486


>gi|354565547|ref|ZP_08984721.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353548420|gb|EHC17865.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 279

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 58/184 (31%), Positives = 93/184 (50%)

Query: 366 KKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
           K+    RI ++ +   D   ++G+ + N+G    AI+ F   +  DP    A + RG  R
Sbjct: 34  KQITSPRIEQAATTKADDFYNQGVNKYNQGDLEGAIAAFSAAIGLDPNDAIAYVNRGYTR 93

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
               + + AI DFT AI+ NP    A+  RG +R  LG S  AIQD ++A+  +PN A  
Sbjct: 94  YDLGDKQGAIEDFTAAIRLNPRDPVAYVNRGYSRYDLGNSQSAIQDYNRAINLDPNYALA 153

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG+      D   A+ED S  ++L+  +  AY   G      G++K A E + +A++
Sbjct: 154 YYNRGLARNDLGDKKGALEDYSTAIRLNPNDALAYVGRGNVRDEQGDHKGAIEDYNQAVR 213

Query: 546 LDRN 549
           L+ N
Sbjct: 214 LNPN 217



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 98/208 (47%)

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           Q+  +  + +  +G  +   G+   AI   S A+  +PN A     RG   +   D   A
Sbjct: 43  QAATTKADDFYNQGVNKYNQGDLEGAIAAFSAAIGLDPNDAIAYVNRGYTRYDLGDKQGA 102

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +ED +A ++L+  +  AY   G +   +G  + A + + +AI LD N+  A+ +      
Sbjct: 103 IEDFTAAIRLNPRDPVAYVNRGYSRYDLGNSQSAIQDYNRAINLDPNYALAYYNRGLARN 162

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           DL + + ALE     + ++   + AY  RG +    G HK AI+D +  + ++P+     
Sbjct: 163 DLGDKKGALEDYSTAIRLNPNDALAYVGRGNVRDEQGDHKGAIEDYNQAVRLNPNEAFAY 222

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLEL 650
           Y R    +   +Y  AI+D++ A DL L
Sbjct: 223 YNRGVTRYNQADYFGAIEDFEKAADLFL 250



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 4/180 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG  + + G    AI  F   ++ +P  P A + RG +R      ++AI D+  AI  
Sbjct: 87  VNRGYTRYDLGDKQGAIEDFTAAIRLNPRDPVAYVNRGYSRYDLGNSQSAIQDYNRAINL 146

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+   A+  RG AR  LG+   A++D S A+   PN A     RG V  +  D   A+E
Sbjct: 147 DPNYALAYYNRGLARNDLGDKKGALEDYSTAIRLNPNDALAYVGRGNVRDEQGDHKGAIE 206

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  V+L+     AY   G+   +  +Y  A E   KA  L   FL   G+ TQ+ Q L
Sbjct: 207 DYNQAVRLNPNEAFAYYNRGVTRYNQADYFGAIEDFEKAADL---FLRQ-GNTTQYQQVL 262


>gi|254410505|ref|ZP_05024284.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196182711|gb|EDX77696.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 323

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 64/233 (27%), Positives = 116/233 (49%), Gaps = 1/233 (0%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           +++ + DF + RG+ ++  G +  AI  F+Q +K D     A   RG     Q E + AI
Sbjct: 64  AQTTAEDF-VQRGVEKLATGDFRGAIDDFNQAIKIDHNSASAYSIRGHTYTLQGEFKKAI 122

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           +D   AI+  P+   A+  RG AR  +G+   AI D +KA++  PN A   + RG  + +
Sbjct: 123 TDLNRAIEIAPNFDPAYNNRGFARLQMGDLEGAISDFTKAIDINPNLALAYNGRGFAHLQ 182

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
            ++   A+ D +  ++++     AY     A    G++K+A     +AI ++ N+ + + 
Sbjct: 183 QENIQEAITDFNQALEINPNLVLAYNNRANARLEQGKFKEAIADFNRAIAVNPNYAQGYS 242

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           +    +    + + AL  L Q L I+  +++AY+ RGL    L   ++AI D 
Sbjct: 243 NRGFVHLQQNDLQTALADLNQALEINPNYAQAYYHRGLTHVQLSNEEEAIADF 295



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 70/307 (22%), Positives = 135/307 (43%), Gaps = 12/307 (3%)

Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSK----SISVDFRLSRGIAQVNEGKYA--SAI 401
           +S +++ LK+T ++  R K F +  I +       +S  F      ++V   K +  +A 
Sbjct: 1   MSIQFNHLKQTLDQQHRQKIFGIPEIIRRTIYLLGLSAIFINPVAASEVQFPKISLTTAE 60

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           S   Q   ED       + RG  +    +   AI DF +AI+ + ++  A+  RG     
Sbjct: 61  SYIAQTTAED------FVQRGVEKLATGDFRGAIDDFNQAIKIDHNSASAYSIRGHTYTL 114

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
            GE  +AI DL++A+E  PN     + RG    +  D   A+ D +  + ++     AY 
Sbjct: 115 QGEFKKAITDLNRAIEIAPNFDPAYNNRGFARLQMGDLEGAISDFTKAIDINPNLALAYN 174

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G A       ++A     +A++++ N + A+ +      +    ++A+    + + ++
Sbjct: 175 GRGFAHLQQENIQEAITDFNQALEINPNLVLAYNNRANARLEQGKFKEAIADFNRAIAVN 234

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
             +++ Y  RG +       + A+ DL+  L I+P+  +  Y R   +  +    EAI D
Sbjct: 235 PNYAQGYSNRGFVHLQQNDLQTALADLNQALEINPNYAQAYYHRGLTHVQLSNEEEAIAD 294

Query: 642 YDAALDL 648
           +  A DL
Sbjct: 295 FQKAADL 301


>gi|193215316|ref|YP_001996515.1| tetratricopeptide domain-containing protein [Chloroherpeton
           thalassium ATCC 35110]
 gi|193088793|gb|ACF14068.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 469

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 140/271 (51%), Gaps = 3/271 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQ 443
           L+ G+A  N G+   ++SIF++ +   P+  E    +  + +  +R +EA  +   E ++
Sbjct: 110 LNLGLALDNIGRPEESVSIFERAIAISPVDDELFFSKAISLQRLERFVEAEQA-LQECLR 168

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            NP   EAW   G  +  LG+  E++   +K ++ +P S++  + RGIV  K K FN +V
Sbjct: 169 INPEHREAWYELGYCKDMLGKLDESLDCYNKHIDLDPYSSNTWYNRGIVLSKLKRFNESV 228

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           +     V + +   SA+   G  L++IG  ++A +++LK I L+ +  +   ++   Y++
Sbjct: 229 QSYDMAVAIRENFSSAWYNRGNVLANIGNLQEAIDSYLKTIDLEPDDTDTLFNIATAYEE 288

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L N ++A+   ++ +  D  ++ A++        + +H  A+  +   + + P  IE L 
Sbjct: 289 LGNYKEAITFYEKAVASDADYADAWYALACCYDMINKHDFALYAIEHSVKLIPDCIEYLQ 348

Query: 624 LRASCYHAIGEYREAIKDYDAALDL-ELDSM 653
            +A   + + ++  A+K Y   L+L EL++M
Sbjct: 349 AKADIEYNLADFLAALKTYQRILELDELNAM 379



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 120/255 (47%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           ++  ++  A+ + +++++  P   ++   RG A       E ++  F +AI  NPS  E 
Sbjct: 49  LDNSEFEDALKVAERLVQIFPYSGDSWFKRGIALNNNGFYEESVLSFEKAIALNPSDTET 108

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
               G A   +G   E++    +A+   P   ++   + I   + + F  A + L  C++
Sbjct: 109 LLNLGLALDNIGRPEESVSIFERAIAISPVDDELFFSKAISLQRLERFVEAEQALQECLR 168

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           ++ E++ A+  LG     +G+  ++ + + K I LD      W +       L    +++
Sbjct: 169 INPEHREAWYELGYCKDMLGKLDESLDCYNKHIDLDPYSSNTWYNRGIVLSKLKRFNESV 228

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           +     + I + FS A++ RG +L  +G  ++AI      + ++P + + L+  A+ Y  
Sbjct: 229 QSYDMAVAIRENFSSAWYNRGNVLANIGNLQEAIDSYLKTIDLEPDDTDTLFNIATAYEE 288

Query: 632 IGEYREAIKDYDAAL 646
           +G Y+EAI  Y+ A+
Sbjct: 289 LGNYKEAITFYEKAV 303



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/245 (20%), Positives = 101/245 (41%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GK   ++  +++ +  DP        RG   +  +    ++  +  A+    +   AW  
Sbjct: 188 GKLDESLDCYNKHIDLDPYSSNTWYNRGIVLSKLKRFNESVQSYDMAVAIRENFSSAWYN 247

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG   A +G   EAI    K ++ EP+  D L        +  ++  A+      V  D 
Sbjct: 248 RGNVLANIGNLQEAIDSYLKTIDLEPDDTDTLFNIATAYEELGNYKEAITFYEKAVASDA 307

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+  L      I ++  A  A   +++L  + +E          +LA+   AL+  
Sbjct: 308 DYADAWYALACCYDMINKHDFALYAIEHSVKLIPDCIEYLQAKADIEYNLADFLAALKTY 367

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           Q++L +D+  +  ++    L   L +  KAI      L +DP++ +  +  A+ Y+  G+
Sbjct: 368 QRILELDELNAMVWYDTASLYLELNKPNKAIPSFQKVLELDPTHADAHFELATAYYLNGQ 427

Query: 635 YREAI 639
             +A+
Sbjct: 428 KAQAL 432


>gi|218248390|ref|YP_002373761.1| hypothetical protein PCC8801_3643 [Cyanothece sp. PCC 8801]
 gi|257060287|ref|YP_003138175.1| hypothetical protein Cyan8802_2471 [Cyanothece sp. PCC 8802]
 gi|218168868|gb|ACK67605.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
 gi|256590453|gb|ACV01340.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
          Length = 406

 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 131/277 (47%), Gaps = 12/277 (4%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           +RL  GI QV    +   +           +  E     G  +    + + AI+DF +AI
Sbjct: 129 YRLEWGITQVKPELHPKTVQ----------LTAEEWFNLGYNKGESGDNQGAIADFNQAI 178

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +      EA+  RG A++ LG+   AI D ++A+E +P+ A   + RG+  +   D   A
Sbjct: 179 KIKSDLAEAYYNRGLAKSNLGDYQGAISDYNQAIEIKPDYAAAYNNRGLTKYNLGDNQGA 238

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D +  +++  ++  AY   GLA  ++G+ + A   + +AI++  ++  A+ +      
Sbjct: 239 ITDYTQAIEIKPDDADAYYNRGLAKYNLGDKQGAIADYNQAIKIKPDYATAYNNRGNAKY 298

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +L + + A+    Q + I   ++ AY   GL    LG ++ AI D +  + I P   +  
Sbjct: 299 NLGDKQGAIADYNQAIKIKPDYTLAYICCGLAKSNLGDNQGAITDYNQAIKIKPDYADAY 358

Query: 623 YLRASCYHAIGEYREAIKDYDAALDL--ELDSMEKFV 657
             R +    +G+ + AI DY+ A  L  + ++ME ++
Sbjct: 359 ICRGNAKKNLGDNQGAIADYNQAAQLYSQQNNMEWYL 395



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 117/235 (49%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K+  ++ +   + G  +   G    AI+ F+Q +K      EA   RG A++   + + A
Sbjct: 145 KTVQLTAEEWFNLGYNKGESGDNQGAIADFNQAIKIKSDLAEAYYNRGLAKSNLGDYQGA 204

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           ISD+ +AI+  P    A+  RG  +  LG++  AI D ++A+E +P+ AD  + RG+  +
Sbjct: 205 ISDYNQAIEIKPDYAAAYNNRGLTKYNLGDNQGAITDYTQAIEIKPDDADAYYNRGLAKY 264

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D   A+ D +  +K+  +  +AY   G A  ++G+ + A   + +AI++  ++  A+
Sbjct: 265 NLGDKQGAIADYNQAIKIKPDYATAYNNRGNAKYNLGDKQGAIADYNQAIKIKPDYTLAY 324

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
                   +L +++ A+    Q + I   ++ AY  RG     LG ++ AI D +
Sbjct: 325 ICCGLAKSNLGDNQGAITDYNQAIKIKPDYADAYICRGNAKKNLGDNQGAIADYN 379



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 76/153 (49%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T+  + K    D   +RG+A+ N G    AI+ ++Q +K  P Y  A   RG A+    +
Sbjct: 243 TQAIEIKPDDADAYYNRGLAKYNLGDKQGAIADYNQAIKIKPDYATAYNNRGNAKYNLGD 302

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+D+ +AI+  P    A+   G A++ LG++  AI D ++A++ +P+ AD    RG
Sbjct: 303 KQGAIADYNQAIKIKPDYTLAYICCGLAKSNLGDNQGAITDYNQAIKIKPDYADAYICRG 362

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
                  D   A+ D +   +L  +  +   YL
Sbjct: 363 NAKKNLGDNQGAIADYNQAAQLYSQQNNMEWYL 395



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 9/150 (6%)

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           E H K +QL     E W +L     +  +++ A+    Q + I    ++AY+ RGL    
Sbjct: 141 ELHPKTVQLTA---EEWFNLGYNKGESGDNQGAIADFNQAIKIKSDLAEAYYNRGLAKSN 197

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           LG ++ AI D +  + I P        R    + +G+ + AI DY  A++++ D  + + 
Sbjct: 198 LGDYQGAISDYNQAIEIKPDYAAAYNNRGLTKYNLGDNQGAITDYTQAIEIKPDDADAYY 257

Query: 658 LQCLAFY-----QKEIALYT-ASKINSEFC 681
            + LA Y     Q  IA Y  A KI  ++ 
Sbjct: 258 NRGLAKYNLGDKQGAIADYNQAIKIKPDYA 287


>gi|449117445|ref|ZP_21753862.1| hypothetical protein HMPREF9726_01847 [Treponema denticola H-22]
 gi|448950646|gb|EMB31467.1| hypothetical protein HMPREF9726_01847 [Treponema denticola H-22]
          Length = 337

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI+ +   +K +P Y EA + RG       E E A++DF + I+  P   +A+  +G   
Sbjct: 59  AIAYYTNSIKANPAYAEAYLNRGEMYYDVNEHEKALADFDKVIELRPKEDKAYYFKGLLL 118

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G   +AI++L+ A+     + +    R     +  ++  A ED++  +KL++++   
Sbjct: 119 NDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQKSAKL 178

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G           A      A +LD N +  +  L   Y +     +A E + +++ 
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIATKLDPNDIWPYNGLLFIYIETKKHNEAFEIVNKMIK 238

Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
           +   +    Y +RGLL    GQ+K+A++D ++G+ + P N     +R   Y  + EY++A
Sbjct: 239 MKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRMYPQNASLYNIRGKIYFDLKEYKKA 298

Query: 639 IKDYDAALDLELDSME 654
           I+D+D A+   L+S +
Sbjct: 299 IEDFDMAIKFALESQD 314



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 3/149 (2%)

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           K++ S   Y  +A ++  E K    A   +  +I+ +  + EA+ +  + Y D+   EKA
Sbjct: 34  KQSYSQAEYFNIAGNTAKEKKDIPRAIAYYTNSIKANPAYAEAYLNRGEMYYDVNEHEKA 93

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           L    +V+ +  +  KAY+ +GLLL+  G + KAI++L++ + ++    E    R++ Y 
Sbjct: 94  LADFDKVIELRPKEDKAYYFKGLLLNDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYE 153

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQ 659
            I EY +A +D + A+ L   S + + L+
Sbjct: 154 QINEYEKAFEDINTAIKLNQKSAKLYNLR 182



 Score = 40.4 bits (93), Expect = 5.6,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 65/153 (42%)

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           KD   A+   +  +K +     AY   G     + E++KA     K I+L     +A+  
Sbjct: 54  KDIPRAIAYYTNSIKANPAYAEAYLNRGEMYYDVNEHEKALADFDKVIELRPKEDKAYYF 113

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                 D  N  KA+E L   + ++ +  + Y  R      + +++KA +D+++ + ++ 
Sbjct: 114 KGLLLNDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQ 173

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            + +   LR   +       +AI D+  A  L+
Sbjct: 174 KSAKLYNLRGRLHEHFERTDDAINDFKIATKLD 206


>gi|319642943|ref|ZP_07997579.1| exported Tpr repeat-family protein [Bacteroides sp. 3_1_40A]
 gi|317385491|gb|EFV66434.1| exported Tpr repeat-family protein [Bacteroides sp. 3_1_40A]
          Length = 658

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 24/293 (8%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           +  S  I+ D  ++ G   +    Y  +I  F+Q++   P   +    RG A+    + +
Sbjct: 4   VVASAQINTDRVMAIGRNALYFEDYVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQ 63

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            A SD +EAI+ NP    A++ RG AR        AI+D +KALEF+P +  + H   + 
Sbjct: 64  GAESDCSEAIERNPFVVSAYQVRGLARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALC 123

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             + +D+  A  DL   + +      AY   G       +   AE+   KAI++DR   +
Sbjct: 124 RIRQEDYKGAKNDLDKLIAISPRYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDAD 183

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYID------------KRFSKAYHLRGLLLHGLGQ 600
            W            + +A+  LQQ  Y D             R S  Y  R L  +    
Sbjct: 184 TW------------ASRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNN 231

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
            + A+ D    L IDP+N    Y R      +G+   AI+D++  +++E D+M
Sbjct: 232 LRGAMSDYDIALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNM 284



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 6/268 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ +  +A AI  + + L+ DP            R  Q + + A +D  + I  +P
Sbjct: 86  RGLARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISP 145

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG+      +++ A +D  KA+E +   AD    R I+  + + +  A  D 
Sbjct: 146 RYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADF 205

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
              ++L   N   Y    LA       + A   +  A+ +D  NF+   GH  +      
Sbjct: 206 DHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDIDPNNFI---GHYNRGLLRAQ 262

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + +  +A++    V+ ++     A   RGLLL   G +K AIKD S+ +   P+ +    
Sbjct: 263 VGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQ 322

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            RA     IG+ + A  D    L  +LD
Sbjct: 323 YRAQARRKIGDVKGADADEFKVLKAQLD 350



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SR I ++ + +Y  A + FD  ++         I R  AR  Q  L  A+SD+  A+  +
Sbjct: 187 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 246

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AIQD +  +E EP++   +  RG++  +  D+  A++D
Sbjct: 247 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 306

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            S  +         Y Y   A   IG+ K A+    K +  QLD+
Sbjct: 307 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 351



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 7/226 (3%)

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
           V +IQ  ++ +  +P  +D    RG+      DF  A  D S  ++ +    SAY   GL
Sbjct: 29  VLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRGL 88

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           A      +  A E + KA++ D   +  W ++        + + A   L +++ I  R++
Sbjct: 89  ARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRYT 148

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           KAY +RG +         A KD    + ID  + +    RA        Y++A  D+D A
Sbjct: 149 KAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADFDHA 208

Query: 646 LDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           + L   +   ++ + LA Y +       + +      +DI  DIDP
Sbjct: 209 IRLSTRNSGVYINRALARYHQ-------NNLRGAMSDYDIALDIDP 247



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D++++  P +  A   RG   +  ++  AAI D+  AIQ +P   +A+  RG     LG
Sbjct: 567 LDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 626

Query: 464 ESVEAIQDLSKALEF 478
            + + IQDLSKA E 
Sbjct: 627 NNRQGIQDLSKAGEL 641



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 12/184 (6%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           +I + + A+  +PN  +    R +  +  +DF +A+EDL+  + ++      Y    L  
Sbjct: 471 SIDEQTAAIVADPNDVNKRFARSLDFYLVQDFASAIEDLNQAIIIEDHFFPVYFNRALIR 530

Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
               EY+K E E  LKA   +++ ++A           A+ E     L +V+ +   F  
Sbjct: 531 YKQLEYQKMEKEYDLKAGPGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 579

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RG +L  L  ++ AI D    + +DP   +  + R   +  +G  R+ I+D   A 
Sbjct: 580 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGIQDLSKAG 639

Query: 647 DLEL 650
           +L L
Sbjct: 640 ELGL 643



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 108/572 (18%), Positives = 221/572 (38%), Gaps = 78/572 (13%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
           N A C  + E +K    D DK + + P   +AY+++G     +  K++     EK +  A
Sbjct: 119 NMALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRG----EVDLKQKDTLAAEKDFGKA 174

Query: 134 L---HQSADL---KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSE 187
           +      AD    +  L L+       Q R    E D  +++  L+   SG+  N  ++ 
Sbjct: 175 IEIDRYDADTWASRAILRLQ-------QQRYKDAEADFDHAIR-LSTRNSGVYINRALAR 226

Query: 188 TSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSD-------------EAKGGSSV 234
             +N+ +  + D    + D+        ++  L   +               E +  + +
Sbjct: 227 YHQNNLRGAMSDYDI-ALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMM 285

Query: 235 PVSKSGLHIN------GKLRE----VSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
            +   GL ++      G +++    ++E  N          A R   ++    +D+F + 
Sbjct: 286 AIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVL 345

Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
              +DK +  + + +  + T +   +  SD         N  +Y K  ++DN+     E 
Sbjct: 346 KAQLDKQNGVDPNKQTADNTENNKTRKKSDK--------NMNNYRKIVVADNEEG---EE 394

Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
           + K  ++  +  +  N   +   F +T   K   +       + I  +N  K      I 
Sbjct: 395 KYKSDYRGRVQDKNVNIVPQ-PMFVLTYYEKHDDVKRQVNYYKFIETLNNQKVLPGRLII 453

Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
               +E P+  E        + F     A+I + T AI ++P+       R      + +
Sbjct: 454 TN--EEAPLTEEQ-----ATKHF-----ASIDEQTAAIVADPNDVNKRFARSLDFYLVQD 501

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
              AI+DL++A+  E +   +   R ++ +K  ++    ++    +K     KSA     
Sbjct: 502 FASAIEDLNQAIIIEDHFFPVYFNRALIRYKQLEYQKMEKEYD--LKAGPGEKSA----- 554

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
                  +Y+  +    K I+L  +F+ A+ +       L +   A+    + + +D +F
Sbjct: 555 ---VKAADYEMVKRDLDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKF 611

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           + AY  RGL    LG +++ I+DLS    LG+
Sbjct: 612 ADAYFNRGLTHIFLGNNRQGIQDLSKAGELGL 643



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 22/189 (11%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQ-ILKEDPMYPEALIGRGTARAFQREL 431
           ++K  + S+DF L +         +ASAI   +Q I+ ED  +P     R   R  Q E 
Sbjct: 486 VNKRFARSLDFYLVQ--------DFASAIEDLNQAIIIEDHFFP-VYFNRALIRYKQLEY 536

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           +    ++   +++ P    A K      AA  E V+  +DL K +E  P+     + RG 
Sbjct: 537 QKMEKEYD--LKAGPGEKSAVK------AADYEMVK--RDLDKVIELAPDFVYAYYNRGN 586

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V    KD+ AA+ D    ++LD +   AY   GL    +G  ++  +   KA +L     
Sbjct: 587 VLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGIQDLSKAGEL--GLF 644

Query: 552 EAWGHLTQF 560
            A+  + +F
Sbjct: 645 SAYNIIKRF 653


>gi|166365801|ref|YP_001658074.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
 gi|166088174|dbj|BAG02882.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
          Length = 707

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 130/263 (49%), Gaps = 1/263 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
           +Y  A++ + Q LK +P Y EAL G+  A    +    A++ + +AIQ NP SA +AW  
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RGQA   LG++ EA++   + L F P ++     +  +  + + ++AA + L   +   +
Sbjct: 407 RGQALDKLGKNQEALESFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 466

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +   +   G +L ++ +Y+ A +A+ +A+ L+ +    W         L     ALE  
Sbjct: 467 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKANSLYQLNKINDALESY 526

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            +    + +FS+A++ +G++L  LG+  +A++  +     + +  +    + +  H +  
Sbjct: 527 SKAGQFNPQFSQAHYSQGIILQKLGRKSEALEAFTQATKANSNYYQAWLNQGALLHQMER 586

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
           ++EAI  Y+ A  +     E F+
Sbjct: 587 FQEAIASYEKARRISSQKAEVFI 609



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 123/262 (46%), Gaps = 5/262 (1%)

Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y+ A++ +++ ++ +P    +A +GRG A     + + A+  F   +  NP+A +AW+ 
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGQALDKLGKNQEALESFDRVLSFNPAASQAWQG 440

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      L +   A + L K L F+ N A I +++G      +D+  AV+     + L+ 
Sbjct: 441 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALALES 500

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
           +N   +     +L  + +   A E++ KA Q +  F +A  H +Q    Q L    +ALE
Sbjct: 501 DNALIWYQKANSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKSEALE 558

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              Q    +  + +A+  +G LLH + + ++AI        I     E      + ++ +
Sbjct: 559 AFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRL 618

Query: 633 GEYREAIKDYDAALDLELDSME 654
           G+Y +AI  Y  A+  + D+ E
Sbjct: 619 GDYSQAIIAYQQAIQRQKDNPE 640



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 99/216 (45%), Gaps = 9/216 (4%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           NS D  +++G   ++ K +  A+      +K++ +   A      AL ++  Y +A   +
Sbjct: 331 NSLD-YYQQGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTY 389

Query: 541 LKAIQLDRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
            KAIQ++ +   +AW    Q    L  +++ALE   +VL  +   S+A+  +  +   L 
Sbjct: 390 EKAIQINPDSAWQAWLGRGQALDKLGKNQEALESFDRVLSFNPAASQAWQGKADIYLELQ 449

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
           Q+  A K L   L    ++ +  Y +      + +Y  A+K YD AL LE D+       
Sbjct: 450 QYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALALESDN------- 502

Query: 660 CLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
            L +YQK  +LY  +KIN     +   G  +P F +
Sbjct: 503 ALIWYQKANSLYQLNKINDALESYSKAGQFNPQFSQ 538



 Score = 43.1 bits (100), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 56/116 (48%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+  FT+A ++N +  +AW  +G     +    EAI    KA       A++    G   
Sbjct: 556 ALEAFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAW 615

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           ++  D++ A+      ++  K+N   +  LG +   +G+Y++A +A+ ++++   N
Sbjct: 616 YRLGDYSQAIIAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSN 671



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 10/200 (5%)

Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
           LN  N   ESYSK+   + + S +  S+  +      L++   +++  + F  T+ +K+ 
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKSEALEAF--TQATKAN 567

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S      L++G       ++  AI+ +++  +      E  IG G A     +   AI  
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIA 627

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +AIQ      E WK  G +   LG+   AIQ   ++L +  N  ++  ++ +   +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687

Query: 498 DFNAAVEDLSACVKLDKENK 517
           +   + ++ +   K+D E +
Sbjct: 688 ELQQSSQNQTP--KVDNEEQ 705


>gi|17229169|ref|NP_485717.1| hypothetical protein alr1677 [Nostoc sp. PCC 7120]
 gi|17135497|dbj|BAB78043.1| alr1677 [Nostoc sp. PCC 7120]
          Length = 280

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 73/234 (31%), Positives = 120/234 (51%), Gaps = 9/234 (3%)

Query: 358 TSNEAKRNKKFCVTRI--------SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
           TS     NK+  VT I        + + S +  F + +G  Q  +G   +AI+ +D+ + 
Sbjct: 29  TSVSCSNNKEVLVTEIGVNPPSRRTTNNSQAGQFYV-QGQRQHAQGDSQAAIASYDKAIG 87

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
            DP Y  A  GRG A     + + AI+D+ EAI+ +P+  EA+  RG ARA+LG++  AI
Sbjct: 88  LDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAI 147

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
            D ++A+   PN A+  + RG       D   A+ED +  ++L+ +   AY   G A +S
Sbjct: 148 TDYNEAIRLSPNYAEAYNNRGNARSVQGDKQGALEDFNQAIRLNPKYAIAYNNRGNARAS 207

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
            G+ + A   + +AI+L+ NF  A+ +         + + ALE LQ+   I +R
Sbjct: 208 QGDRQGAISDYNQAIRLNSNFGPAYNNRGNARAAQGDRQGALEDLQKAADIFQR 261



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 90/194 (46%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G  +  Q + +AAI+ + +AI  +P    A++ RG A   LG+  +AI D ++A+   P
Sbjct: 65  QGQRQHAQGDSQAAIASYDKAIGLDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAIRLSP 124

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A+  + RG       D   A+ D +  ++L      AY   G A S  G+ + A E  
Sbjct: 125 NDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYAEAYNNRGNARSVQGDKQGALEDF 184

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI+L+  +  A+ +         + + A+    Q + ++  F  AY+ RG      G 
Sbjct: 185 NQAIRLNPKYAIAYNNRGNARASQGDRQGAISDYNQAIRLNSNFGPAYNNRGNARAAQGD 244

Query: 601 HKKAIKDLSSGLGI 614
            + A++DL     I
Sbjct: 245 RQGALEDLQKAADI 258



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 1/217 (0%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E  ++  +    +N  AG+ + + GQ + A G+S  AI    KA+  +P+ +     RG+
Sbjct: 43  EIGVNPPSRRTTNNSQAGQFYVQ-GQRQHAQGDSQAAIASYDKAIGLDPDYSAAYRGRGL 101

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             F   D   A+ D +  ++L   +  A+   G A +S+G+   A   + +AI+L  N+ 
Sbjct: 102 AYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYA 161

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           EA+ +         + + ALE   Q + ++ +++ AY+ RG      G  + AI D +  
Sbjct: 162 EAYNNRGNARSVQGDKQGALEDFNQAIRLNPKYAIAYNNRGNARASQGDRQGAISDYNQA 221

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + ++ +       R +   A G+ + A++D   A D+
Sbjct: 222 IRLNSNFGPAYNNRGNARAAQGDRQGALEDLQKAADI 258



 Score = 47.4 bits (111), Expect = 0.046,   Method: Composition-based stats.
 Identities = 26/92 (28%), Positives = 47/92 (51%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            +S+ A+    + + +D  +S AY  RGL    LG  +KAI D +  + + P++ E    
Sbjct: 73  GDSQAAIASYDKAIGLDPDYSAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNS 132

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           R +   ++G+   AI DY+ A+ L  +  E +
Sbjct: 133 RGNARASLGDNAGAITDYNEAIRLSPNYAEAY 164


>gi|312130417|ref|YP_003997757.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906963|gb|ADQ17404.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 445

 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 123/263 (46%), Gaps = 3/263 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+++   G Y  +IS F   +  +P    +   RG A+   ++   AISDF  AIQ +P 
Sbjct: 31  GVSKSKSGDYLGSISAFSTAINMNPDNASSYFNRGLAKQALKDHRGAISDFDRAIQISPK 90

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              ++  R  ++++  E+  A+QD + A+E  P       +RG++  K  D   AV D +
Sbjct: 91  DALSYHYRAISKSSQDENGAALQDFNIAIELSPKDVQSYLQRGVLFAKLNDLPLAVRDFN 150

Query: 508 ACVKLD---KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
             V+L+   +E   A+   GL  + +G+YK A   +  AI+ +    + +    + Y  +
Sbjct: 151 KVVELNPSAQEKFQAFYSRGLCKAKMGDYKGAIADYSSAIESNNKRPQPFLERGKNYIKV 210

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              EKAL  L + + +D + ++ + LRG     L     A  D  S L +DP+  E  Y 
Sbjct: 211 EEFEKALGDLNEAIKMDAQSAEGFALRGFAKSRLRDFNGAKIDFDSALRLDPNLKEAYYG 270

Query: 625 RASCYHAIGEYREAIKDYDAALD 647
           RA     +  ++ AI D    LD
Sbjct: 271 RAFALTMLYNHKIAIDDLGKILD 293



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 11/255 (4%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+ +   G Y  AI+ +   ++ +   P+  + RG       E E A+ D  EAI+ +
Sbjct: 168 SRGLCKAKMGDYKGAIADYSSAIESNNKRPQPFLERGKNYIKVEEFEKALGDLNEAIKMD 227

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
             + E +  RG A++ L +   A  D   AL  +PN  +  + R        +   A++D
Sbjct: 228 AQSAEGFALRGFAKSRLRDFNGAKIDFDSALRLDPNLKEAYYGRAFALTMLYNHKIAIDD 287

Query: 506 LSACVKLDKENKSAYT-YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           L   +      K     Y+ L+ + + + ++A         L  +  E +     F + L
Sbjct: 288 LGKILDTKSSTKDVKNQYVTLSKAQLDKLREAVTYTFPIPALSEDLSEGY-----FVRGL 342

Query: 565 A-----NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           A     N++ AL  L + + I+  + +AY +RG+    +G   +A+ D  S L + P+  
Sbjct: 343 AQLRGNNTKDALSDLNKSIEINPIYPQAYFVRGMAKSAMGMQTEAVIDFGSALKLHPAYP 402

Query: 620 ECLYLRASCYHAIGE 634
           E  Y+R     +IGE
Sbjct: 403 EAYYVRGLIKVSIGE 417



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 2/108 (1%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E    RG A+      + A+SD  ++I+ NP   +A+  RG A++A+G   EA+ D   A
Sbjct: 335 EGYFVRGLAQLRGNNTKDALSDLNKSIEINPIYPQAYFVRGMAKSAMGMQTEAVIDFGSA 394

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
           L+  P   +  + RG++     + NA   DLS   +L   N  AYT +
Sbjct: 395 LKLHPAYPEAYYVRGLIKVSIGETNAGCVDLSRAGELGYAN--AYTLI 440


>gi|425466275|ref|ZP_18845578.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9809]
 gi|389831304|emb|CCI26077.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9809]
          Length = 423

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 138/280 (49%), Gaps = 4/280 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    +  KY  A++ +D+ ++ +P +      RG     Q++ E A+SD  +AI  N
Sbjct: 139 NRGNLYYDLQKYDLALADYDKAIEINPNFAILYYNRGGVYYNQQKYELALSDINKAIDIN 198

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+  RG     L +   A+ D++KA+E  PN A+  + RG++    + ++ A+ D
Sbjct: 199 PNYAEAYYNRGNIYYDLQKYELALSDINKAIELNPNYAEAYNNRGLLYKDLQKYDLALSD 258

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  + ++     AY   G+      +Y  A   + KAI+++RN    + +    Y+   
Sbjct: 259 YSKAIDINPNLAEAYVNRGVLYRLQEKYDLALSDYSKAIEINRNLAGTYYNRGVLYRLQE 318

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             + AL    + + I+  +++AY  RG+L  G  +++ A+ D +  + I+P+  +    R
Sbjct: 319 KYDLALADWNKAIEINPNYAEAYVNRGVLYFGQKKYELALSDYNKAIEINPNLAQAYLGR 378

Query: 626 ASCYHAIGEYREAIKDYD--AALDLELDSMEKF--VLQCL 661
              Y  +G+  +A  D    A L L+ ++M  +  V+Q L
Sbjct: 379 GGLYAILGQPEKAKIDLQQAAILFLQQNNMAAYEKVMQIL 418



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 3/255 (1%)

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
           + RG     Q++ E A+ D+ +AI+ NP+   A+  RG     L +   A+ D  KA+E 
Sbjct: 104 VNRGILYRRQQKYELALDDYNKAIKLNPNHANAYNNRGNLYYDLQKYDLALADYDKAIEI 163

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
            PN A + + RG V +  + +  A+ D++  + ++     AY   G     + +Y+ A  
Sbjct: 164 NPNFAILYYNRGGVYYNQQKYELALSDINKAIDINPNYAEAYYNRGNIYYDLQKYELALS 223

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
              KAI+L+ N+ EA+ +    Y+DL   + AL    + + I+   ++AY  RG+L    
Sbjct: 224 DINKAIELNPNYAEAYNNRGLLYKDLQKYDLALSDYSKAIDINPNLAEAYVNRGVLYRLQ 283

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
            ++  A+ D S  + I+ +     Y R   Y    +Y  A+ D++ A+++  +  E +V 
Sbjct: 284 EKYDLALSDYSKAIEINRNLAGTYYNRGVLYRLQEKYDLALADWNKAIEINPNYAEAYVN 343

Query: 659 Q-CLAFYQK--EIAL 670
           +  L F QK  E+AL
Sbjct: 344 RGVLYFGQKKYELAL 358



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 62/118 (52%), Gaps = 12/118 (10%)

Query: 11  YRLNKTHK-TICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLA 64
           YRL + +   + +  + + ++  +A     R  L +L      +L +W+KAI I +   A
Sbjct: 280 YRLQEKYDLALSDYSKAIEINRNLAGTYYNRGVLYRLQEKYDLALADWNKAIEI-NPNYA 338

Query: 65  QSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEA 122
           ++Y      NR   Y   + ++  + D +KA++++P L QAY+ +G  ++ LG+ E+A
Sbjct: 339 EAY-----VNRGVLYFGQKKYELALSDYNKAIEINPNLAQAYLGRGGLYAILGQPEKA 391



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 11/124 (8%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLAQSY 67
           L K    + +  + + ++  +A A   R  L +L      +L ++SKAI I  +L    Y
Sbjct: 249 LQKYDLALSDYSKAIDINPNLAEAYVNRGVLYRLQEKYDLALSDYSKAIEINRNLAGTYY 308

Query: 68  EIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
                 NR   Y   E +   + D +KA++++P   +AY+ +G  +    + E ALS + 
Sbjct: 309 ------NRGVLYRLQEKYDLALADWNKAIEINPNYAEAYVNRGVLYFGQKKYELALSDYN 362

Query: 128 KGYE 131
           K  E
Sbjct: 363 KAIE 366


>gi|158339402|ref|YP_001520579.1| hypothetical protein AM1_6330 [Acaryochloris marina MBIC11017]
 gi|158309643|gb|ABW31260.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 1346

 Score = 95.5 bits (236), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 119/273 (43%), Gaps = 30/273 (10%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            G+   ++G+Y  A++ F+Q +  DP  P    G+G     Q++ + AI+  T+AI+  P 
Sbjct: 761  GMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQDAIAAHTKAIELEPD 820

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
            +   +  R        +  +AI DL+KA+   P      + RG          AA+ D S
Sbjct: 821  SANDYFSRANVYITTQQYQDAIADLTKAIRLAPPDPIYFNNRGDAYDALNQPEAALADYS 880

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
              +++DK N  AY  LG       +Y++A                           +A  
Sbjct: 881  QAIEVDKNNTRAYIGLGTVYQRARQYQRA---------------------------IAQF 913

Query: 568  EKALEC--LQQVLYIDKRFSK-AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            +KA+E     Q L  DK++   AY  RG L   LG+ ++AI D S  + + P        
Sbjct: 914  DKAIEVADFPQKLETDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRA 973

Query: 625  RASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
            RA  Y A+  Y+EAI DY  A+++    +  ++
Sbjct: 974  RALNYTALNRYQEAIADYTQAIEIAPKDLSTYI 1006



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 34/287 (11%)

Query: 396 KYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +YA A++ FD+ ++ +P +   A  G+      Q    AA +   + +   P+    WK 
Sbjct: 565 QYAEALAAFDRAIQLNPSFVHLAWYGKALVYRSQENFPAAETALLKVLNLKPNYKPGWKV 624

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHE-------------------------- 488
              A     +  +A+  ++  L+  P  A +L+E                          
Sbjct: 625 LSAAYRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVVLSELYRYSEALAAIDAAIAQAP 684

Query: 489 -------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
                  RG V  K   +   +  L+  +++D     AYT  G+  S +   K+A     
Sbjct: 685 RAAFYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLK 744

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KAI LD  ++ A+G L   Y      ++AL    Q + ID +    Y  +G +     Q+
Sbjct: 745 KAIALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQY 804

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + AI   +  + ++P +    + RA+ Y    +Y++AI D   A+ L
Sbjct: 805 QDAIAAHTKAIELEPDSANDYFSRANVYITTQQYQDAIADLTKAIRL 851



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 21/273 (7%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG    + GK   AI+ F Q ++  P        R          + AI+D+T+AI+  
Sbjct: 939  ARGFLYSDLGKLEQAIADFSQAIELSPKVTYLYRARALNYTALNRYQEAIADYTQAIEIA 998

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P     + RRG+    LG+  EA  D  K L  EP+ +     R  V    K +  A+ D
Sbjct: 999  PKDLSTYIRRGKIYRTLGQETEANADFQKVLTTEPSDSQGYGVRADVYKSLKRYPEALAD 1058

Query: 506  LSACVKLDKENKSAYTYLGLALSSI-GEYKKAEEAHL---KAIQLDRNFLEAWGHLTQFY 561
             +  ++L  +N    + L  + + + G  ++ E+A+L   KA+ L  N          F 
Sbjct: 1059 YTKAIELAPQNPFQRSLLHSSRAQMHGNLQQYEQANLDYSKALALLPN------PTVPFA 1112

Query: 562  QDL-----------ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             DL              + AL    Q + I  +   AY  RG L  G  +++ A+ D S+
Sbjct: 1113 ADLYIARGNNFLSWQRQDDALADFNQAIGISPKNVMAYVGRGRLSLGTQKYQDALADFST 1172

Query: 611  GLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
             + ++P        R+  Y A+    +AI D D
Sbjct: 1173 VIKLNPKLGFVYDFRSRTYQALNRIEDAIADAD 1205



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 110/274 (40%), Gaps = 17/274 (6%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQSN 445
            R IAQ ++   A  ++ F Q L+ D  Y   A   RG   +   +LE AI+DF++AI+ +
Sbjct: 908  RAIAQFDK---AIEVADFPQKLETDKKYKGLAYSARGFLYSDLGKLEQAIADFSQAIELS 964

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P     ++ R     AL    EAI D ++A+E  P        RG +         A  D
Sbjct: 965  PKVTYLYRARALNYTALNRYQEAIADYTQAIEIAPKDLSTYIRRGKIYRTLGQETEANAD 1024

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------DRNFL-----EAW 554
                +  +  +   Y        S+  Y +A   + KAI+L       R+ L     +  
Sbjct: 1025 FQKVLTTEPSDSQGYGVRADVYKSLKRYPEALADYTKAIELAPQNPFQRSLLHSSRAQMH 1084

Query: 555  GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            G+L Q+ Q   +  KAL  L          +  Y  RG       +   A+ D +  +GI
Sbjct: 1085 GNLQQYEQANLDYSKALALLPNPTV--PFAADLYIARGNNFLSWQRQDDALADFNQAIGI 1142

Query: 615  DPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             P N+     R        +Y++A+ D+   + L
Sbjct: 1143 SPKNVMAYVGRGRLSLGTQKYQDALADFSTVIKL 1176



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 36/258 (13%)

Query: 434 AISDFTEAIQSNPS------AGEAWKRRGQARAALGESV--------------------- 466
           A++ F  AIQ NPS       G+A   R Q      E+                      
Sbjct: 569 ALAAFDRAIQLNPSFVHLAWYGKALVYRSQENFPAAETALLKVLNLKPNYKPGWKVLSAA 628

Query: 467 --------EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
                   +A+  ++  L+  P  A +L+E+ +V  +   ++ A+              +
Sbjct: 629 YRLQKKPEQALTAVNSGLKIAPTDAQLLNEKYVVLSELYRYSEALAA-IDAAIAQAPRAA 687

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
            Y   G  L  +  Y++   A  +AI++D N   A+ +    Y  L   ++A+  L++ +
Sbjct: 688 FYINRGWVLIKMDRYEETLTALNQAIEIDPNMAIAYTNRGVTYSFLKRPKEAIADLKKAI 747

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            +D ++  AY   G+L H  G++++A+   + G+ IDP N      +   Y A  +Y++A
Sbjct: 748 ALDSQYISAYGGLGMLYHSQGRYQEALAQFNQGIAIDPKNPINYSGQGFVYFAQKQYQDA 807

Query: 639 IKDYDAALDLELDSMEKF 656
           I  +  A++LE DS   +
Sbjct: 808 IAAHTKAIELEPDSANDY 825



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 1/213 (0%)

Query: 379  ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
             + D  ++RG   ++  +   A++ F+Q +   P    A +GRG      ++ + A++DF
Sbjct: 1111 FAADLYIARGNNFLSWQRQDDALADFNQAIGISPKNVMAYVGRGRLSLGTQKYQDALADF 1170

Query: 439  TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
            +  I+ NP  G  +  R +   AL    +AI D  + +E + N+A     RGI++    +
Sbjct: 1171 STVIKLNPKLGFVYDFRSRTYQALNRIEDAIADADQWIERQANAAS-YTRRGILHVLGAN 1229

Query: 499  FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
             + A+ D    + L+ +       LGL     G  K+A     +AI+LD +  E    L 
Sbjct: 1230 PSLALNDFQQAITLNPKAIIPTVNLGLIYYEQGNRKQAIAQFQRAIELDGSLAEPQLALA 1289

Query: 559  QFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
                     ++A+   Q  L +D +F +   L+
Sbjct: 1290 TALYHGGQQKQAIALAQSALKLDPKFQEVAFLK 1322


>gi|333987253|ref|YP_004519860.1| hypothetical protein MSWAN_1038 [Methanobacterium sp. SWAN-1]
 gi|333825397|gb|AEG18059.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 329

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 57/231 (24%), Positives = 113/231 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G      G+   A+  +D+ L+ +P Y +A   +G       + E ++  + +A++ N
Sbjct: 82  NKGFIFAKLGQQRDALKCYDKALEINPKYFDAWNNKGGLLTKLGKYEESLKYYNKALELN 141

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  +      LG+  E +    K LE  P   D  + +G+   + + +  A++ 
Sbjct: 142 PKYLKAWNNKAVVFGKLGKHEEELNCFDKILEMNPEDTDTWYNKGVSLQEMELYQEALKS 201

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +KLD+ + SA    G+    +G+Y KA E   K ++L+ N +E  G+    +++L 
Sbjct: 202 YDMVLKLDETDLSAINNKGVIFKELGKYNKALECFDKVLELNPNKIETMGNKGITFRELG 261

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
              ++L C  ++L ++      ++ +GL L  LG+H +AIK   + L +DP
Sbjct: 262 KFPESLNCFNKLLKLNPNDKMGWYHKGLALEKLGKHVEAIKSFDNSLKLDP 312



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 67/310 (21%), Positives = 147/310 (47%), Gaps = 7/310 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L++G+  +N+GKY  ++   D+ L+ DP   E L  +G A     + E +I  F + ++ 
Sbjct: 13  LNKGVKLLNQGKYGESLECLDKALELDPNDREILHSKGVALKELGKFEESIKCFDKVLEL 72

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +     AW  +G   A LG+  +A++   KALE  P   D  + +G +  K   +  +++
Sbjct: 73  DKKVYSAWNNKGFIFAKLGQQRDALKCYDKALEINPKYFDAWNNKGGLLTKLGKYEESLK 132

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
             +  ++L+ +   A+    +    +G++++      K ++++    + W +     Q++
Sbjct: 133 YYNKALELNPKYLKAWNNKAVVFGKLGKHEEELNCFDKILEMNPEDTDTWYNKGVSLQEM 192

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++AL+    VL +D+    A + +G++   LG++ KA++     L ++P+ IE +  
Sbjct: 193 ELYQEALKSYDMVLKLDETDLSAINNKGVIFKELGKYNKALECFDKVLELNPNKIETMGN 252

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           +   +  +G++ E++  ++  L L  +         + +Y K +AL    K       FD
Sbjct: 253 KGITFRELGKFPESLNCFNKLLKLNPNDK-------MGWYHKGLALEKLGKHVEAIKSFD 305

Query: 685 IDGDIDPLFK 694
               +DP F+
Sbjct: 306 NSLKLDPDFE 315



 Score = 40.0 bits (92), Expect = 6.6,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 34/182 (18%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  +I +      D   ++G++      Y  A+  +D +LK D     A+  +G      
Sbjct: 167 CFDKILEMNPEDTDTWYNKGVSLQEMELYQEALKSYDMVLKLDETDLSAINNKGVI---- 222

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
                    F E                     LG+  +A++   K LE  PN  + +  
Sbjct: 223 ---------FKE---------------------LGKYNKALECFDKVLELNPNKIETMGN 252

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +GI   +   F  ++   +  +KL+  +K  + + GLAL  +G++ +A ++   +++LD 
Sbjct: 253 KGITFRELGKFPESLNCFNKLLKLNPNDKMGWYHKGLALEKLGKHVEAIKSFDNSLKLDP 312

Query: 549 NF 550
           +F
Sbjct: 313 DF 314


>gi|449106387|ref|ZP_21743053.1| hypothetical protein HMPREF9729_01318 [Treponema denticola ASLM]
 gi|451968096|ref|ZP_21921325.1| hypothetical protein HMPREF9728_00496 [Treponema denticola US-Trep]
 gi|448964900|gb|EMB45566.1| hypothetical protein HMPREF9729_01318 [Treponema denticola ASLM]
 gi|451703053|gb|EMD57435.1| hypothetical protein HMPREF9728_00496 [Treponema denticola US-Trep]
          Length = 337

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 64/254 (25%), Positives = 121/254 (47%), Gaps = 1/254 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI+ +   +K +P Y EA + RG       E E A++DF + I+  P   +A+  +G   
Sbjct: 59  AIAYYTNSIKANPAYAEAYLNRGEMYYDVNEHEKALADFDKVIELRPKEDKAYYFKGLLL 118

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G   +AI++L+ A+     + +    R     +  ++  A ED++  +KL++++   
Sbjct: 119 NDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQKSAKL 178

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G           A      A +LD N +  +  L   Y +     +A E + +++ 
Sbjct: 179 YNLRGRLHEHFERTDDAINDFKIATKLDPNDIWPYNGLLFIYIETKKHNEAFEIVNKMIK 238

Query: 580 IDKRF-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
           +   +    Y +RGLL    GQ+K+A++D ++G+ + P N     +R   Y  + EY++A
Sbjct: 239 MKPSWIGILYGIRGLLFSFRGQYKEAVEDCNTGIRMYPQNASLYNIRGKIYFDLKEYKKA 298

Query: 639 IKDYDAALDLELDS 652
           I+D+D A+   L+S
Sbjct: 299 IEDFDMAIKFALES 312



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 3/149 (2%)

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           K++ S   Y  +A ++  E K    A   +  +I+ +  + EA+ +  + Y D+   EKA
Sbjct: 34  KQSYSQAEYFNIAGNTAKEKKDIPRAIAYYTNSIKANPAYAEAYLNRGEMYYDVNEHEKA 93

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           L    +V+ +  +  KAY+ +GLLL+  G + KAI++L++ + ++    E    R++ Y 
Sbjct: 94  LADFDKVIELRPKEDKAYYFKGLLLNDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYE 153

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQ 659
            I EY +A +D + A+ L   S + + L+
Sbjct: 154 QINEYEKAFEDINTAIKLNQKSAKLYNLR 182



 Score = 40.4 bits (93), Expect = 5.5,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 65/153 (42%)

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           KD   A+   +  +K +     AY   G     + E++KA     K I+L     +A+  
Sbjct: 54  KDIPRAIAYYTNSIKANPAYAEAYLNRGEMYYDVNEHEKALADFDKVIELRPKEDKAYYF 113

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                 D  N  KA+E L   + ++ +  + Y  R      + +++KA +D+++ + ++ 
Sbjct: 114 KGLLLNDDGNYNKAIENLNTAINLNDKAYEYYEARSTAYEQINEYEKAFEDINTAIKLNQ 173

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            + +   LR   +       +AI D+  A  L+
Sbjct: 174 KSAKLYNLRGRLHEHFERTDDAINDFKIATKLD 206


>gi|434390009|ref|YP_007125715.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
 gi|428262587|gb|AFZ28535.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
          Length = 227

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/192 (28%), Positives = 99/192 (51%), Gaps = 11/192 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+ ++ +G +  AI  F ++++ +P Y E    RG A++  ++ +AA+SDF +A++ N
Sbjct: 45  NQGVQKLEQGNFNGAIEDFSRVVQLNPRYYEGFCLRGLAKSQLKDFKAAVSDFDQALRLN 104

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +A+  RG A A LG    AI D ++ L  +P S D  + RG +N++  +   A+ D
Sbjct: 105 PNHTDAYNGRGTAHAELGSIEAAITDFNQVLRIDPKSVDAYYNRGFLNYRQGNHKLAIAD 164

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++     AY   GLA  ++G+ K A            N LE    L Q   D  
Sbjct: 165 FNQALQINPNLADAYGNRGLAEYALGDRKNA-----------INDLEQAASLFQRQGDTL 213

Query: 566 NSEKALECLQQV 577
             ++    LQQ+
Sbjct: 214 RYQQTQALLQQI 225



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 50/162 (30%), Positives = 83/162 (51%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           H +G+   +  +FN A+ED S  V+L+      +   GLA S + ++K A     +A++L
Sbjct: 44  HNQGVQKLEQGNFNGAIEDFSRVVQLNPRYYEGFCLRGLAKSQLKDFKAAVSDFDQALRL 103

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           + N  +A+      + +L + E A+    QVL ID +   AY+ RG L +  G HK AI 
Sbjct: 104 NPNHTDAYNGRGTAHAELGSIEAAITDFNQVLRIDPKSVDAYYNRGFLNYRQGNHKLAIA 163

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           D +  L I+P+  +    R    +A+G+ + AI D + A  L
Sbjct: 164 DFNQALQINPNLADAYGNRGLAEYALGDRKNAINDLEQAASL 205



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 77/163 (47%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G  +  Q     AI DF+  +Q NP   E +  RG A++ L +   A+ D  +AL   P
Sbjct: 46  QGVQKLEQGNFNGAIEDFSRVVQLNPRYYEGFCLRGLAKSQLKDFKAAVSDFDQALRLNP 105

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N  D  + RG  + +     AA+ D +  +++D ++  AY   G      G +K A    
Sbjct: 106 NHTDAYNGRGTAHAELGSIEAAITDFNQVLRIDPKSVDAYYNRGFLNYRQGNHKLAIADF 165

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
            +A+Q++ N  +A+G+       L + + A+  L+Q   + +R
Sbjct: 166 NQALQINPNLADAYGNRGLAEYALGDRKNAINDLEQAASLFQR 208


>gi|428309117|ref|YP_007120094.1| hypothetical protein Mic7113_0778 [Microcoleus sp. PCC 7113]
 gi|428250729|gb|AFZ16688.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
          Length = 1506

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 2/262 (0%)

Query: 397  YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
            Y  A+  F++ +K DP     L GRG      +    A++D   A+  +P    A   RG
Sbjct: 957  YEEAVDDFNKAIKIDPKNQYVLAGRGDTYQRMKRYTEAVADLNTALNIDPKYAFALGSRG 1016

Query: 457  QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            +    +G+  +A+ D ++AL+ +P    +L  RG       +++ A+ D +  +KLD + 
Sbjct: 1017 ETYRLMGDYDKALSDFNQALKLDPQYIFVLGSRGETYQSIGNYDKALVDFNQALKLDSKL 1076

Query: 517  KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
            +  +   G     +GEY KA      AI L+ N+  A  +  Q Y+       AL    Q
Sbjct: 1077 EWVFADRGETYRLMGEYTKALMDFNSAINLNPNYALAIANRGQIYKQQKRYNDALNDFNQ 1136

Query: 577  VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
             + +D +       R      +G ++KA+   +  + ++P N+  L  R + YH +  Y+
Sbjct: 1137 AIELDPQQHWIIPERIETYRLMGGYEKALTIFNQAINLNPKNVGALASRGATYHFMERYK 1196

Query: 637  EAIKDYDAALDLELDSMEKFVL 658
            EA+ D++    ++LDS   F L
Sbjct: 1197 EALGDFNRT--IQLDSKNTFAL 1216



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 143/329 (43%), Gaps = 39/329 (11%)

Query: 363  KRNKKFCVTRISKSKSISVD----FRL-SRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
            +R K++       + ++++D    F L SRG      G Y  A+S F+Q LK DP Y   
Sbjct: 986  QRMKRYTEAVADLNTALNIDPKYAFALGSRGETYRLMGDYDKALSDFNQALKLDPQYIFV 1045

Query: 418  LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
            L  RG         + A+ DF +A++ +      +  RG+    +GE  +A+ D + A+ 
Sbjct: 1046 LGSRGETYQSIGNYDKALVDFNQALKLDSKLEWVFADRGETYRLMGEYTKALMDFNSAIN 1105

Query: 478  FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD-------KENKSAYTYLG------ 524
              PN A  +  RG +  + K +N A+ D +  ++LD        E    Y  +G      
Sbjct: 1106 LNPNYALAIANRGQIYKQQKRYNDALNDFNQAIELDPQQHWIIPERIETYRLMGGYEKAL 1165

Query: 525  --------------LALSSIG-------EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                           AL+S G        YK+A     + IQLD     A G   Q Y  
Sbjct: 1166 TIFNQAINLNPKNVGALASRGATYHFMERYKEALGDFNRTIQLDSKNTFALGSRGQIYSQ 1225

Query: 564  LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            +   EKAL  L + + +D     A   RG     L ++++A+ D +  + ++P N+  L+
Sbjct: 1226 MEQYEKALADLNKAIELDPTSDWAIISRGETYLELLRYEEALADFTRIMELNPKNVSALW 1285

Query: 624  LRASCYHAIGEYREAIKDYDAALDLELDS 652
             R + Y  +  Y +A+ D++ A+ L  DS
Sbjct: 1286 GRGNAYREMERYDKALNDFNQAIKLGSDS 1314



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 17/264 (6%)

Query: 395  GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
            G Y  A++IF+Q +  +P    AL  RG    F    + A+ DF   IQ +     A   
Sbjct: 1159 GGYEKALTIFNQAINLNPKNVGALASRGATYHFMERYKEALGDFNRTIQLDSKNTFALGS 1218

Query: 455  RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            RGQ  + + +  +A+ DL+KA+E +P S   +  RG    +   +  A+ D +  ++L+ 
Sbjct: 1219 RGQIYSQMEQYEKALADLNKAIELDPTSDWAIISRGETYLELLRYEEALADFTRIMELNP 1278

Query: 515  ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------------DRNFLEAWGHLTQFYQ 562
            +N SA    G A   +  Y KA     +AI+L            D    + W      Y+
Sbjct: 1279 KNVSALWGRGNAYREMERYDKALNDFNQAIKLGSDSKLDKLTMSDLIAQQGW-----LYR 1333

Query: 563  DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
             +   E+AL   +  L ++ +   A   RG +   + ++ +A+ + +  L +D  N   +
Sbjct: 1334 QMGRYEEALANFKNTLELNPKQYLALEGRGEIYRYMRRYNEALDNFTFALELDTKNDWPI 1393

Query: 623  YLRASCYHAIGEYREAIKDYDAAL 646
            Y RA  Y A+G+  +   D + A+
Sbjct: 1394 YNRALVYLALGQKDQGQADLNKAI 1417



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 100/231 (43%)

Query: 418  LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
            L  +G +    +  E A+ DF +AI+ +P        RG     +    EA+ DL+ AL 
Sbjct: 944  LASQGDSNRMIKHYEEAVDDFNKAIKIDPKNQYVLAGRGDTYQRMKRYTEAVADLNTALN 1003

Query: 478  FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
             +P  A  L  RG       D++ A+ D +  +KLD +        G    SIG Y KA 
Sbjct: 1004 IDPKYAFALGSRGETYRLMGDYDKALSDFNQALKLDPQYIFVLGSRGETYQSIGNYDKAL 1063

Query: 538  EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
                +A++LD      +    + Y+ +    KAL      + ++  ++ A   RG +   
Sbjct: 1064 VDFNQALKLDSKLEWVFADRGETYRLMGEYTKALMDFNSAINLNPNYALAIANRGQIYKQ 1123

Query: 598  LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              ++  A+ D +  + +DP     +  R   Y  +G Y +A+  ++ A++L
Sbjct: 1124 QKRYNDALNDFNQAIELDPQQHWIIPERIETYRLMGGYEKALTIFNQAINL 1174



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 17/173 (9%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ- 443
            +SRG   +   +Y  A++ F +I++ +P    AL GRG A       + A++DF +AI+ 
Sbjct: 1251 ISRGETYLELLRYEEALADFTRIMELNPKNVSALWGRGNAYREMERYDKALNDFNQAIKL 1310

Query: 444  -----------SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
                       S+  A + W  R      +G   EA+ +    LE  P     L  RG +
Sbjct: 1311 GSDSKLDKLTMSDLIAQQGWLYR-----QMGRYEEALANFKNTLELNPKQYLALEGRGEI 1365

Query: 493  NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
                + +N A+++ +  ++LD +N        L   ++G+  + +    KAIQ
Sbjct: 1366 YRYMRRYNEALDNFTFALELDTKNDWPIYNRALVYLALGQKDQGQADLNKAIQ 1418


>gi|150006540|ref|YP_001301284.1| hypothetical protein BVU_4060 [Bacteroides vulgatus ATCC 8482]
 gi|294778841|ref|ZP_06744258.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
 gi|345521560|ref|ZP_08800883.1| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
 gi|149934964|gb|ABR41662.1| putative exported Tpr repeat-family protein [Bacteroides vulgatus
           ATCC 8482]
 gi|294447294|gb|EFG15877.1| tetratricopeptide repeat protein [Bacteroides vulgatus PC510]
 gi|345456509|gb|EET14661.2| TPR domain-containing protein [Bacteroides sp. 4_3_47FAA]
          Length = 669

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 24/293 (8%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           +  S  I+ D  ++ G   +    Y  +I  F+Q++   P   +    RG A+    + +
Sbjct: 15  VVASAQINTDRVMAIGRNALYFEDYVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQ 74

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            A SD +EAI+ NP    A++ RG AR        AI+D +KALEF+P +  + H   + 
Sbjct: 75  GAESDCSEAIERNPFVVSAYQVRGLARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALC 134

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             + +D+  A  DL   + +      AY   G       +   AE+   KAI++DR   +
Sbjct: 135 RIRQEDYKGAKNDLDKLIAISPRYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDAD 194

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYID------------KRFSKAYHLRGLLLHGLGQ 600
            W            + +A+  LQQ  Y D             R S  Y  R L  +    
Sbjct: 195 TW------------ASRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNN 242

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
            + A+ D    L IDP+N    Y R      +G+   AI+D++  +++E D+M
Sbjct: 243 LRGAMSDYDIALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNM 295



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 6/268 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ +  +A AI  + + L+ DP            R  Q + + A +D  + I  +P
Sbjct: 97  RGLARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISP 156

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG+      +++ A +D  KA+E +   AD    R I+  + + +  A  D 
Sbjct: 157 RYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADF 216

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
              ++L   N   Y    LA       + A   +  A+ +D  NF+   GH  +      
Sbjct: 217 DHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDIDPNNFI---GHYNRGLLRAQ 273

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + +  +A++    V+ ++     A   RGLLL   G +K AIKD S+ +   P+ +    
Sbjct: 274 VGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQ 333

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            RA     IG+ + A  D    L  +LD
Sbjct: 334 YRAQARRKIGDVKGADADEFKVLKAQLD 361



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SR I ++ + +Y  A + FD  ++         I R  AR  Q  L  A+SD+  A+  +
Sbjct: 198 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 257

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AIQD +  +E EP++   +  RG++  +  D+  A++D
Sbjct: 258 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 317

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            S  +         Y Y   A   IG+ K A+    K +  QLD+
Sbjct: 318 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 362



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 7/226 (3%)

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
           V +IQ  ++ +  +P  +D    RG+      DF  A  D S  ++ +    SAY   GL
Sbjct: 40  VLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRGL 99

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           A      +  A E + KA++ D   +  W ++        + + A   L +++ I  R++
Sbjct: 100 ARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRYT 159

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           KAY +RG +         A KD    + ID  + +    RA        Y++A  D+D A
Sbjct: 160 KAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADFDHA 219

Query: 646 LDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           + L   +   ++ + LA Y +       + +      +DI  DIDP
Sbjct: 220 IRLSTRNSGVYINRALARYHQ-------NNLRGAMSDYDIALDIDP 258



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D++++  P +  A   RG   +  ++  AAI D+  AIQ +P   +A+  RG     LG
Sbjct: 578 LDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 637

Query: 464 ESVEAIQDLSKALEF 478
            + + IQDLSKA E 
Sbjct: 638 NNRQGIQDLSKAGEL 652



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 12/184 (6%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           +I + + A+  +PN  +    R +  +  +DF +A+EDL+  + ++      Y    L  
Sbjct: 482 SIDEQTAAIVADPNDVNKRFARSLDFYLVQDFASAIEDLNQAIIIEDHFFPVYFNRALIR 541

Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
               EY+K E E  LKA   +++ ++A           A+ E     L +V+ +   F  
Sbjct: 542 YKQLEYQKMEKEYDLKAGPGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 590

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RG +L  L  ++ AI D    + +DP   +  + R   +  +G  R+ I+D   A 
Sbjct: 591 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGIQDLSKAG 650

Query: 647 DLEL 650
           +L L
Sbjct: 651 ELGL 654



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 108/572 (18%), Positives = 221/572 (38%), Gaps = 78/572 (13%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
           N A C  + E +K    D DK + + P   +AY+++G     +  K++     EK +  A
Sbjct: 130 NMALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRG----EVDLKQKDTLAAEKDFGKA 185

Query: 134 L---HQSADL---KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSE 187
           +      AD    +  L L+       Q R    E D  +++  L+   SG+  N  ++ 
Sbjct: 186 IEIDRYDADTWASRAILRLQ-------QQRYKDAEADFDHAIR-LSTRNSGVYINRALAR 237

Query: 188 TSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSD-------------EAKGGSSV 234
             +N+ +  + D    + D+        ++  L   +               E +  + +
Sbjct: 238 YHQNNLRGAMSDYDI-ALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMM 296

Query: 235 PVSKSGLHIN------GKLRE----VSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
            +   GL ++      G +++    ++E  N          A R   ++    +D+F + 
Sbjct: 297 AIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVL 356

Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
              +DK +  + + +  + T +   +  SD         N  +Y K  ++DN+     E 
Sbjct: 357 KAQLDKQNGVDPNKQTADNTENNKTRKKSDK--------NMNNYRKIVVADNEEG---EE 405

Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
           + K  ++  +  +  N   +   F +T   K   +       + I  +N  K      I 
Sbjct: 406 KYKSDYRGRVQDKNVNIVPQ-PMFVLTYYEKHDDVKRQVNYYKFIETLNNQKVLPGRLII 464

Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
               +E P+  E        + F     A+I + T AI ++P+       R      + +
Sbjct: 465 TN--EEAPLTEEQ-----ATKHF-----ASIDEQTAAIVADPNDVNKRFARSLDFYLVQD 512

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
              AI+DL++A+  E +   +   R ++ +K  ++    ++    +K     KSA     
Sbjct: 513 FASAIEDLNQAIIIEDHFFPVYFNRALIRYKQLEYQKMEKEYD--LKAGPGEKSA----- 565

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
                  +Y+  +    K I+L  +F+ A+ +       L +   A+    + + +D +F
Sbjct: 566 ---VKAADYEMVKRDLDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKF 622

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           + AY  RGL    LG +++ I+DLS    LG+
Sbjct: 623 ADAYFNRGLTHIFLGNNRQGIQDLSKAGELGL 654



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 22/189 (11%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQ-ILKEDPMYPEALIGRGTARAFQREL 431
           ++K  + S+DF L +         +ASAI   +Q I+ ED  +P     R   R  Q E 
Sbjct: 497 VNKRFARSLDFYLVQ--------DFASAIEDLNQAIIIEDHFFP-VYFNRALIRYKQLEY 547

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           +    ++   +++ P    A K      AA  E V+  +DL K +E  P+     + RG 
Sbjct: 548 QKMEKEYD--LKAGPGEKSAVK------AADYEMVK--RDLDKVIELAPDFVYAYYNRGN 597

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V    KD+ AA+ D    ++LD +   AY   GL    +G  ++  +   KA +L     
Sbjct: 598 VLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGIQDLSKAGEL--GLF 655

Query: 552 EAWGHLTQF 560
            A+  + +F
Sbjct: 656 SAYNIIKRF 664


>gi|126655454|ref|ZP_01726893.1| TPR repeat [Cyanothece sp. CCY0110]
 gi|126622933|gb|EAZ93638.1| TPR repeat [Cyanothece sp. CCY0110]
          Length = 391

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 94/172 (54%), Gaps = 2/172 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +    +GK   AI+ + + ++  P +P+A   RG A   Q++ E AI+DFT+AI+ N
Sbjct: 171 NRAMIYEGQGKLDLAITDYTKAIQYQPEFPQAYHNRGIAYKMQQKPELAIADFTKAIEVN 230

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG   + LG+   A+ D  K ++ EPN   + + RG +  + K +N A+ D
Sbjct: 231 PNYASAYGNRGLTYSELGKWNLALADYGKTIQLEPNDPIVYYNRGNLYAQQKKWNLALSD 290

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
               ++L+ + +SAY   GL  S   ++  A   + KAI+L+ NF  AW + 
Sbjct: 291 FDKAIQLNPDYESAYYNRGLVYSRQQKHDLAIADYTKAIELNSNF--AWAYF 340



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 6/273 (2%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q + + AIS + +AI   P+  EA+  RG      G+   A+ D +KA+E  PN A    
Sbjct: 77  QEKWDLAISSYNQAITLEPTLLEAYNNRGVVYQNQGKLDLAVADYTKAIELSPNYASAYQ 136

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            R IV  K +    A+ D +  + L  +N  AY    +     G+   A   + KAIQ  
Sbjct: 137 NRAIVYHKQQQLPLALADYNKLIDLAPDNAIAYNNRAMIYEGQGKLDLAITDYTKAIQYQ 196

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
             F +A+ +    Y+     E A+    + + ++  ++ AY  RGL    LG+   A+ D
Sbjct: 197 PEFPQAYHNRGIAYKMQQKPELAIADFTKAIEVNPNYASAYGNRGLTYSELGKWNLALAD 256

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
               + ++P++    Y R + Y    ++  A+ D+D A+ L  D    +  + L + +++
Sbjct: 257 YGKTIQLEPNDPIVYYNRGNLYAQQKKWNLALSDFDKAIQLNPDYESAYYNRGLVYSRQQ 316

Query: 668 -----IALYT-ASKINSEFCWFDIDGDIDPLFK 694
                IA YT A ++NS F W   +     +FK
Sbjct: 317 KHDLAIADYTKAIELNSNFAWAYFNRGTGYMFK 349



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 118/264 (44%), Gaps = 2/264 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   N+GK   A++ + + ++  P Y  A   R      Q++L  A++D+ + I   
Sbjct: 103 NRGVVYQNQGKLDLAVADYTKAIELSPNYASAYQNRAIVYHKQQQLPLALADYNKLIDLA 162

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  R       G+   AI D +KA++++P      H RGI     +    A+ D
Sbjct: 163 PDNAIAYNNRAMIYEGQGKLDLAITDYTKAIQYQPEFPQAYHNRGIAYKMQQKPELAIAD 222

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++    SAY   GL  S +G++  A   + K IQL+ N    + +    Y    
Sbjct: 223 FTKAIEVNPNYASAYGNRGLTYSELGKWNLALADYGKTIQLEPNDPIVYYNRGNLYAQQK 282

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL- 624
               AL    + + ++  +  AY+ RGL+     +H  AI D +  + ++ SN    Y  
Sbjct: 283 KWNLALSDFDKAIQLNPDYESAYYNRGLVYSRQQKHDLAIADYTKAIELN-SNFAWAYFN 341

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R + Y    E++ A  D+  A  L
Sbjct: 342 RGTGYMFKREFKTAKDDFQEAAQL 365


>gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
 gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360]
 gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20]
 gi|385777647|ref|YP_005686812.1| peptidase S41 [Clostridium thermocellum DSM 1313]
 gi|419722800|ref|ZP_14249937.1| peptidase S41 [Clostridium thermocellum AD2]
 gi|419726301|ref|ZP_14253324.1| peptidase S41 [Clostridium thermocellum YS]
 gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
 gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360]
 gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20]
 gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313]
 gi|380770353|gb|EIC04250.1| peptidase S41 [Clostridium thermocellum YS]
 gi|380781180|gb|EIC10841.1| peptidase S41 [Clostridium thermocellum AD2]
          Length = 745

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 141/275 (51%), Gaps = 8/275 (2%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           +  +   S   +  + GKY  AI  +D++++ D     A +G+G A     + E A+  F
Sbjct: 24  VKTNIYFSAAESAFDSGKYEDAIKYYDKVIEADSGNAMAYLGKGLALDALGKYEEALEFF 83

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-NSA---DILHERGIVNF 494
            +AI+ N    +A+  +G   A+L    E++++  KA E +P NSA   D+ +  G+ N 
Sbjct: 84  DKAIEINKDLAKAYNAKGTTLASLERYEESLENFKKAAELKPKNSAYQNDVAY--GLNNL 141

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               F  A++     +KL+  +  AY+  G AL ++G+  +A E + KAI+L   +  A+
Sbjct: 142 G--RFEEAIQYAEKALKLNPRSGVAYSNKGFALDALGKLDEAIECYDKAIELSPTYTNAY 199

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            + +     +  +E+A+E L +VL ID     A   +G  L+ LG+++KAI+   + +  
Sbjct: 200 YNKSIAVFKMGKTEEAIELLDKVLEIDPDDLDAITSKGYCLNELGKYEKAIECFDTAIEK 259

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            P +      +A+  + +G+Y  A+++ + A+ LE
Sbjct: 260 YPKDPYPYVCKATSLYYLGKYDNALEECNKAIKLE 294



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 115/242 (47%), Gaps = 12/242 (4%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           N G++  AI   ++ LK +P    A   +G A     +L+ AI  + +AI+ +P+   A+
Sbjct: 140 NLGRFEEAIQYAEKALKLNPRSGVAYSNKGFALDALGKLDEAIECYDKAIELSPTYTNAY 199

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             +  A   +G++ EAI+ L K LE +P+  D +  +G    +   +  A+E     +  
Sbjct: 200 YNKSIAVFKMGKTEEAIELLDKVLEIDPDDLDAITSKGYCLNELGKYEKAIECFDTAI-- 257

Query: 513 DKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           +K  K  Y Y+    +L  +G+Y  A E   KAI+L+  F +++    +   +  + E+A
Sbjct: 258 EKYPKDPYPYVCKATSLYYLGKYDNALEECNKAIKLEYTFPDSYIWKAKILVEKGDIEEA 317

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS-------NIECLY 623
            +   + L I +  S  Y ++G +      + +AIK     + +DPS        I CLY
Sbjct: 318 RKSCDEFLAIAEDAS-VYDMKGQIYLHEYNYPEAIKLFDKAIEVDPSYEDSYINKIYCLY 376

Query: 624 LR 625
           L+
Sbjct: 377 LQ 378



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 7/193 (3%)

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  A++     ++ D  N  AY   GLAL ++G+Y++A E   KAI+++++  +A+    
Sbjct: 42  YEDAIKYYDKVIEADSGNAMAYLGKGLALDALGKYEEALEFFDKAIEINKDLAKAYNAKG 101

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                L   E++LE  ++   +  + S   +     L+ LG+ ++AI+     L ++P +
Sbjct: 102 TTLASLERYEESLENFKKAAELKPKNSAYQNDVAYGLNNLGRFEEAIQYAEKALKLNPRS 161

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
                 +     A+G+  EAI+ YD A++L             A+Y K IA++   K   
Sbjct: 162 GVAYSNKGFALDALGKLDEAIECYDKAIELSPTYTN-------AYYNKSIAVFKMGKTEE 214

Query: 679 EFCWFDIDGDIDP 691
                D   +IDP
Sbjct: 215 AIELLDKVLEIDP 227



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 52/118 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G   ++E  Y  AI +FD+ ++ DP Y ++ I +      Q+  +  I   T+     P
Sbjct: 337 KGQIYLHEYNYPEAIKLFDKAIEVDPSYEDSYINKIYCLYLQKNYKECIEFATKVQTIFP 396

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           ++ +     G   + + E  +AI+ L KA E  P    IL       +  +D+  A E
Sbjct: 397 NSADIPWYIGDCYSIMMEPEKAIEYLKKAHELNPKDVGILTSIAWEYYSLEDYAKASE 454


>gi|427729657|ref|YP_007075894.1| hypothetical protein Nos7524_2456 [Nostoc sp. PCC 7524]
 gi|427365576|gb|AFY48297.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
          Length = 276

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 102/194 (52%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           F   R +     G  + AI+ F++ ++ +P   +    RG ARA   +L  AI+DF +A+
Sbjct: 51  FYKQRAMDSALSGDLSGAIADFNKAVQMNPNDADTYNNRGKARALSGDLPGAIADFNQAL 110

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           Q N +  +A+K RG+AR   G+   AI D ++AL+  PN AD  + RG+      D   +
Sbjct: 111 QINSNDADAYKNRGKARVLSGDLPGAIADFNQALQINPNDADTYYSRGVARDNSGDLKGS 170

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +ED +  ++++     AY   G+  +  G+ K A E   +A++++ N  +++ +    Y 
Sbjct: 171 IEDFNQALRINPNYVDAYNNRGVNRALEGDLKSAIEDFNQALEINPNNADSYKNRGIAYS 230

Query: 563 DLANSEKALECLQQ 576
            L + +KA+  LQ+
Sbjct: 231 QLGDVKKAIADLQK 244



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 53/161 (32%), Positives = 86/161 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+   G    AI+ F+Q L+ +    +A   RG AR    +L  AI+DF +A+Q N
Sbjct: 88  NRGKARALSGDLPGAIADFNQALQINSNDADAYKNRGKARVLSGDLPGAIADFNQALQIN 147

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  + +  RG AR   G+   +I+D ++AL   PN  D  + RG+      D  +A+ED
Sbjct: 148 PNDADTYYSRGVARDNSGDLKGSIEDFNQALRINPNYVDAYNNRGVNRALEGDLKSAIED 207

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            +  ++++  N  +Y   G+A S +G+ KKA     KA +L
Sbjct: 208 FNQALEINPNNADSYKNRGIAYSQLGDVKKAIADLQKAAEL 248



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 98/228 (42%), Gaps = 34/228 (14%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           R    A   +L  AI+DF +A+Q NP+  + +  RG+ARA  G+   AI D ++AL+   
Sbjct: 55  RAMDSALSGDLSGAIADFNKAVQMNPNDADTYNNRGKARALSGDLPGAIADFNQALQINS 114

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N AD    RG       D   A+ D +  ++++  +   Y   G+A  + G+ K +    
Sbjct: 115 NDADAYKNRGKARVLSGDLPGAIADFNQALQINPNDADTYYSRGVARDNSGDLKGS---- 170

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
                                         +E   Q L I+  +  AY+ RG+     G 
Sbjct: 171 ------------------------------IEDFNQALRINPNYVDAYNNRGVNRALEGD 200

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            K AI+D +  L I+P+N +    R   Y  +G+ ++AI D   A +L
Sbjct: 201 LKSAIEDFNQALEINPNNADSYKNRGIAYSQLGDVKKAIADLQKAAEL 248



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 64/112 (57%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   SRG+A+ N G    +I  F+Q L+ +P Y +A   RG  RA + +L++AI DF +A
Sbjct: 152 DTYYSRGVARDNSGDLKGSIEDFNQALRINPNYVDAYNNRGVNRALEGDLKSAIEDFNQA 211

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           ++ NP+  +++K RG A + LG+  +AI DL KA E      +    +  +N
Sbjct: 212 LEINPNNADSYKNRGIAYSQLGDVKKAIADLQKAAELFQQQGETAKSQAAIN 263



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 88/214 (41%), Gaps = 34/214 (15%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +K+R    A  G+   AI D +KA++  PN AD  + RG       D   A+ D +  ++
Sbjct: 52  YKQRAMDSALSGDLSGAIADFNKAVQMNPNDADTYNNRGKARALSGDLPGAIADFNQALQ 111

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           ++  +  AY   G A    G+                      G +  F           
Sbjct: 112 INSNDADAYKNRGKARVLSGDLP--------------------GAIADF----------- 140

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               Q L I+   +  Y+ RG+     G  K +I+D +  L I+P+ ++    R      
Sbjct: 141 ---NQALQINPNDADTYYSRGVARDNSGDLKGSIEDFNQALRINPNYVDAYNNRGVNRAL 197

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            G+ + AI+D++ AL++  ++ + +  + +A+ Q
Sbjct: 198 EGDLKSAIEDFNQALEINPNNADSYKNRGIAYSQ 231


>gi|429122838|ref|ZP_19183371.1| hypothetical protein A966_00870 [Brachyspira hampsonii 30446]
 gi|426281293|gb|EKV58292.1| hypothetical protein A966_00870 [Brachyspira hampsonii 30446]
          Length = 800

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 41/234 (17%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI DF +AI       E +  RG   + L E  EA++ ++KA+E +P   +  +ERG++N
Sbjct: 409 AIEDFDKAISIYEGDSEFYYYRGLTSSYLNELDEALKYINKAIELDPKYINAYNERGLIN 468

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK------------------- 534
           ++  ++N+A+ED    ++LD EN  A  +L L+  ++ EY+                   
Sbjct: 469 YRNSNYNSAIEDFKNVIELDNENVYANYHLALSYDALEEYETALKYYARVIELEPNTPDA 528

Query: 535 ---------------KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
                          +A E   K I +D N ++A+ ++   Y  L   +KA+EC  +V+ 
Sbjct: 529 FYNRALAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNIGICYDYLKEYQKAIECYTKVIE 588

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
            D     AY+ RGL   GL  + +A +D    L I+P         A+ Y+ IG
Sbjct: 589 TDNYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPK-------YANAYNGIG 635



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 140/292 (47%), Gaps = 9/292 (3%)

Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           G+ +   G Y  AI+ + ++++  D +Y  +   R  A    +  E A+ D+ +AI+ NP
Sbjct: 295 GLLEYKLGNYRDAINYYTKMIEINDDIYY-SYYNRALAEESLQLYEDALEDYNKAIELNP 353

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               ++  RG  +  +    EA++D +KA+E E + A + + R ++  +   +  A+ED 
Sbjct: 354 EDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEKDDAYLYNNRALLKGRMHLYKEAIEDF 413

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + + + +   Y Y GL  S + E  +A +   KAI+LD  ++ A+          +N
Sbjct: 414 DKAISIYEGDSEFYYYRGLTSSYLNELDEALKYINKAIELDPKYINAYNERGLINYRNSN 473

Query: 567 SEKALECLQQVLYIDKRFSKA-YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              A+E  + V+ +D     A YHL  L    L +++ A+K  +  + ++P+  +  Y R
Sbjct: 474 YNSAIEDFKNVIELDNENVYANYHL-ALSYDALEEYETALKYYARVIELEPNTPDAFYNR 532

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIALYT 672
           A     +  Y EAI+D+   +D++ + ++ +         L  YQK I  YT
Sbjct: 533 ALAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNIGICYDYLKEYQKAIECYT 584



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 12/283 (4%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I+ +    VD   +RG++  N   Y  AI  FD++++  P    A   RG ++++    E
Sbjct: 74  INNTHDTLVDAYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGRYE 133

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
             I DF + ++ N    EA    G      G+  EAI++   AL  +    D  + RG  
Sbjct: 134 EGIKDFKKVLEFNEDDAEAIYYIGLGYFYCGKYQEAIKNFDIALLLDDEIDDAYYYRGHS 193

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
                 +  A+ D +  V+L  ++  +Y    L    +G Y+ A     KAI+LD +F  
Sbjct: 194 KRYLNMYEEALSDFNKIVELRYDDSDSYYSKALTEFFLGLYEDAINDFNKAIELDNHFSN 253

Query: 553 AWGH--LT----QFYQD-LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           A+    LT    + Y+D + + +KALE        D+     Y+  GLL + LG ++ AI
Sbjct: 254 AYYFRGLTKNSLELYKDAMDDYKKALEYAD-----DENIINIYNDMGLLEYKLGNYRDAI 308

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              +  + I+       Y RA    ++  Y +A++DY+ A++L
Sbjct: 309 NYYTKMIEINDDIYYSYYNRALAEESLQLYEDALEDYNKAIEL 351



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 81/167 (48%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
            D  + RG+  F  K++  A++D    ++L  E  +AY   G + S +G Y++  +   K
Sbjct: 82  VDAYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGRYEEGIKDFKK 141

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
            ++ + +  EA  ++   Y      ++A++     L +D     AY+ RG     L  ++
Sbjct: 142 VLEFNEDDAEAIYYIGLGYFYCGKYQEAIKNFDIALLLDDEIDDAYYYRGHSKRYLNMYE 201

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +A+ D +  + +   + +  Y +A     +G Y +AI D++ A++L+
Sbjct: 202 EALSDFNKIVELRYDDSDSYYSKALTEFFLGLYEDAINDFNKAIELD 248



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 63/131 (48%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y +A+  + ++++ +P  P+A   R  A         AI DF + I  + +  +A+   
Sbjct: 507 EYETALKYYARVIELEPNTPDAFYNRALAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNI 566

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L E  +AI+  +K +E +  S D  + RG+     K +N A ED    ++++ +
Sbjct: 567 GICYDYLKEYQKAIECYTKVIETDNYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPK 626

Query: 516 NKSAYTYLGLA 526
             +AY  +G +
Sbjct: 627 YANAYNGIGFS 637



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 10/159 (6%)

Query: 331 SSISDNKS-----SDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
           S+I D K+     +++  +   L+  +D L+E     K        R+ + +  + D   
Sbjct: 476 SAIEDFKNVIELDNENVYANYHLALSYDALEEYETALK-----YYARVIELEPNTPDAFY 530

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +A++    Y  AI  F +++  D    +A    G    + +E + AI  +T+ I+++
Sbjct: 531 NRALAEIEMELYHEAIEDFYKVIDIDSNIIDAYFNIGICYDYLKEYQKAIECYTKVIETD 590

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
             + +A+  RG ++  L    EA +D  +ALE  P  A+
Sbjct: 591 NYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPKYAN 629



 Score = 40.4 bits (93), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 54/143 (37%), Gaps = 9/143 (6%)

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RGL    L  +++AIKD    + + P      Y R      +G Y E IKD+   L
Sbjct: 84  AYYNRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGRYEEGIKDFKKVL 143

Query: 647 DLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNV 706
           +   D  E       A Y   +  +   K       FDI   +D    + +  R H K  
Sbjct: 144 EFNEDDAE-------AIYYIGLGYFYCGKYQEAIKNFDIALLLDDEIDDAYYYRGHSKRY 196

Query: 707 CEKVYRQPPLRDSLKKGKLRRQD 729
                 +  L D  K  +LR  D
Sbjct: 197 LNMY--EEALSDFNKIVELRYDD 217



 Score = 40.4 bits (93), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
           NR   Y  L+ ++  I+D DK ++L P    AY  +G + S LGR EE +  ++K
Sbjct: 87  NRGLSYFNLKNYEEAIKDFDKVIELSPEKSNAYYNRGHSKSYLGRYEEGIKDFKK 141


>gi|158521784|ref|YP_001529654.1| hypothetical protein Dole_1773 [Desulfococcus oleovorans Hxd3]
 gi|158510610|gb|ABW67577.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
           Hxd3]
          Length = 318

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 122/263 (46%), Gaps = 35/263 (13%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ Q+ + K   AI++F + ++++P   +A   RG A   + +L+ AI DF+ AI+ +P 
Sbjct: 41  GLEQMRQSKPDQAIALFSKAIEDNPNRAKAYYHRGNAYGIKHDLDNAIDDFSTAIELDPL 100

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +A+  R  A    GE   A+ D + A+E  P S     +RGIV ++    +AA +D +
Sbjct: 101 FLDAYIGRATAFNQKGEIQNALSDFATAIEISPKSLVAYLKRGIVLYEQGALDAAADDFT 160

Query: 508 ACVKLDKENKS-AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
             ++    + S AY + G+ L   G                           Q  Q LA+
Sbjct: 161 RVIEDQPLSASVAYYHRGMILKKKG---------------------------QLLQALAD 193

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
                  L +V+ I+   +KAY  RG L   LG++ KAI D    L + P  +    LR 
Sbjct: 194 -------LTRVIDIEPGLTKAYAARGDLYFELGEYDKAIDDAGRMLTVFPLEMRAFVLRG 246

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
             + A G+   AIKDY+ AL ++
Sbjct: 247 DAWKAKGDLARAIKDYERALSID 269



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 33/232 (14%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q + + AI+ F++AI+ NP+  +A+  RG A     +   AI D S A+E +P   D   
Sbjct: 47  QSKPDQAIALFSKAIEDNPNRAKAYYHRGNAYGIKHDLDNAIDDFSTAIELDPLFLDAYI 106

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            R     +  +   A+ D +  +++  ++  AY   G+ L   G    A +   + I+  
Sbjct: 107 GRATAFNQKGEIQNALSDFATAIEISPKSLVAYLKRGIVLYEQGALDAAADDFTRVIE-- 164

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
                               ++ L             S AY+ RG++L   GQ  +A+ D
Sbjct: 165 --------------------DQPLSA-----------SVAYYHRGMILKKKGQLLQALAD 193

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
           L+  + I+P   +    R   Y  +GEY +AI D    L +    M  FVL+
Sbjct: 194 LTRVIDIEPGLTKAYAARGDLYFELGEYDKAIDDAGRMLTVFPLEMRAFVLR 245



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 1/175 (0%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  + R  A   +G+  +A+S F   ++  P    A + RG     Q  L+AA  DFT 
Sbjct: 102 LDAYIGRATAFNQKGEIQNALSDFATAIEISPKSLVAYLKRGIVLYEQGALDAAADDFTR 161

Query: 441 AIQSNP-SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            I+  P SA  A+  RG      G+ ++A+ DL++ ++ EP        RG + F+  ++
Sbjct: 162 VIEDQPLSASVAYYHRGMILKKKGQLLQALADLTRVIDIEPGLTKAYAARGDLYFELGEY 221

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           + A++D    + +      A+   G A  + G+  +A + + +A+ +D  F  A 
Sbjct: 222 DKAIDDAGRMLTVFPLEMRAFVLRGDAWKAKGDLARAIKDYERALSIDPEFAAAL 276



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 2/141 (1%)

Query: 371 TRISKSKSISVDFRL-SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           TR+ + + +S       RG+    +G+   A++   +++  +P   +A   RG       
Sbjct: 160 TRVIEDQPLSASVAYYHRGMILKKKGQLLQALADLTRVIDIEPGLTKAYAARGDLYFELG 219

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E + AI D    +   P    A+  RG A  A G+   AI+D  +AL  +P  A  L ++
Sbjct: 220 EYDKAIDDAGRMLTVFPLEMRAFVLRGDAWKAKGDLARAIKDYERALSIDPEFAAALEKK 279

Query: 490 GIVNFKFKDFNAAVEDLS-AC 509
           G+   +  D   A +  + AC
Sbjct: 280 GMALLETDDITGACQAFAQAC 300


>gi|300870997|ref|YP_003785868.1| hypothetical protein BP951000_1381 [Brachyspira pilosicoli 95/1000]
 gi|300688696|gb|ADK31367.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
          Length = 790

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 115/212 (54%), Gaps = 5/212 (2%)

Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
           S ++ I VD     GIA+ N GKY  +I  +++ +K +P   +A + RG ++ +  + E+
Sbjct: 169 SNNEEIYVDI----GIAKSNLGKYEESIEYYNKAIKLNPNNSDAYLNRGISKGYLGKYES 224

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           +I+DF ++I+  P+   ++  RG ++A L    E+I D +K +E   N++D    RG   
Sbjct: 225 SINDFNKSIELTPNDENSYFNRGISKAYLRRYEESINDYNKVIELNSNNSDAYLNRGASK 284

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           F  + +  A++D +  ++L+      Y  LG++  ++ +Y  A E   KAI+L+ N  E+
Sbjct: 285 FNLEIYEEAIKDFNKVIELNPNANDVYFNLGISNFNLKKYVDAIENFNKAIELNSNNEES 344

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           +     F +    +E A++ ++  L I+K ++
Sbjct: 345 Y-FFRGFSKIYLENENAIDDIRSFLKINKNYN 375



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 114/220 (51%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +  E +I  F + I+ NP+  +A+  RG ++A L    E+++D   +++  PN  +   E
Sbjct: 50  KNYEESIKYFNKVIELNPNNEKAYFNRGLSKAYLQIYEESLKDFDISIKLNPNIDNTYLE 109

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +  V      +  A+E+L+  + L++ N  AY   G+A S++G Y+ A + + +AI+L+ 
Sbjct: 110 KSNVLLDINKYEDAIENLNKAITLNQNNSYAYFNRGIAKSNLGRYEDAIDDYNRAIELNS 169

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N  E +  +     +L   E+++E   + + ++   S AY  RG+    LG+++ +I D 
Sbjct: 170 NNEEIYVDIGIAKSNLGKYEESIEYYNKAIKLNPNNSDAYLNRGISKGYLGKYESSINDF 229

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           +  + + P++    + R      +  Y E+I DY+  ++L
Sbjct: 230 NKSIELTPNDENSYFNRGISKAYLRRYEESINDYNKVIEL 269



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 124/246 (50%), Gaps = 2/246 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RGIA+ N G+Y  AI  +++ ++ +    E  +  G A++   + E +I  + +AI+ 
Sbjct: 142 FNRGIAKSNLGRYEDAIDDYNRAIELNSNNEEIYVDIGIAKSNLGKYEESIEYYNKAIKL 201

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+  +A+  RG ++  LG+   +I D +K++E  PN  +    RGI     + +  ++ 
Sbjct: 202 NPNNSDAYLNRGISKGYLGKYESSINDFNKSIELTPNDENSYFNRGISKAYLRRYEESIN 261

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++L+  N  AY   G +  ++  Y++A +   K I+L+ N  + + +L     +L
Sbjct: 262 DYNKVIELNSNNSDAYLNRGASKFNLEIYEEAIKDFNKVIELNPNANDVYFNLGISNFNL 321

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS-NIECLY 623
                A+E   + + ++    ++Y  RG     L +++ AI D+ S L I+ + NI  + 
Sbjct: 322 KKYVDAIENFNKAIELNSNNEESYFFRGFSKIYL-ENENAIDDIRSFLKINKNYNIYIIT 380

Query: 624 LRASCY 629
           +    Y
Sbjct: 381 ILQEFY 386



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 137/280 (48%), Gaps = 4/280 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+++     Y  ++  FD  +K +P      + +        + E AI +  +AI  
Sbjct: 74  FNRGLSKAYLQIYEESLKDFDISIKLNPNIDNTYLEKSNVLLDINKYEDAIENLNKAITL 133

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N +   A+  RG A++ LG   +AI D ++A+E   N+ +I  + GI       +  ++E
Sbjct: 134 NQNNSYAYFNRGIAKSNLGRYEDAIDDYNRAIELNSNNEEIYVDIGIAKSNLGKYEESIE 193

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ 562
             +  +KL+  N  AY   G++   +G+Y+ +     K+I+L  N   ++ +  +++ Y 
Sbjct: 194 YYNKAIKLNPNNSDAYLNRGISKGYLGKYESSINDFNKSIELTPNDENSYFNRGISKAY- 252

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            L   E+++    +V+ ++   S AY  RG     L  +++AIKD +  + ++P+  +  
Sbjct: 253 -LRRYEESINDYNKVIELNSNNSDAYLNRGASKFNLEIYEEAIKDFNKVIELNPNANDVY 311

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           +        + +Y +AI++++ A++L  ++ E +  +  +
Sbjct: 312 FNLGISNFNLKKYVDAIENFNKAIELNSNNEESYFFRGFS 351


>gi|265751998|ref|ZP_06087791.1| TPR repeat-containing protein [Bacteroides sp. 3_1_33FAA]
 gi|423229339|ref|ZP_17215744.1| hypothetical protein HMPREF1063_01564 [Bacteroides dorei
           CL02T00C15]
 gi|423245182|ref|ZP_17226256.1| hypothetical protein HMPREF1064_02462 [Bacteroides dorei
           CL02T12C06]
 gi|263236790|gb|EEZ22260.1| TPR repeat-containing protein [Bacteroides sp. 3_1_33FAA]
 gi|392634308|gb|EIY28233.1| hypothetical protein HMPREF1063_01564 [Bacteroides dorei
           CL02T00C15]
 gi|392640115|gb|EIY33921.1| hypothetical protein HMPREF1064_02462 [Bacteroides dorei
           CL02T12C06]
          Length = 669

 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 117/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   +    RG A+    + + A SD +EAI+ NP    A++ RG
Sbjct: 39  YVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRG 98

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR        AI+D +KALEF+P +  + H   +   + +D+  A  DL   + +    
Sbjct: 99  LARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRY 158

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   AE+   KAI++DR   + W            + +A+  LQQ
Sbjct: 159 TKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTW------------ASRAILRLQQ 206

Query: 577 VLYID------------KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y D             R S  Y  R L  +     + A+ D    L IDP+N    Y 
Sbjct: 207 QRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDIDPNNFIGHYN 266

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D++  +++E D+M
Sbjct: 267 RGLLRAQVGDDNRAIQDFNFVIEMEPDNM 295



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 6/268 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ +  +A AI  + + L+ DP            R  Q + + A +D  + I  +P
Sbjct: 97  RGLARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISP 156

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG+      +++ A +D  KA+E +   AD    R I+  + + +  A  D 
Sbjct: 157 RYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADF 216

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
              ++L   N   Y    LA       + A   +  A+ +D  NF+   GH  +      
Sbjct: 217 DHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDIDPNNFI---GHYNRGLLRAQ 273

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + +  +A++    V+ ++     A   RGLLL   G +K AIKD S+ +   P+ +    
Sbjct: 274 VGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQ 333

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            RA     IG+ + A  D    L  +LD
Sbjct: 334 YRAQARRKIGDVKGADADEFKVLKAQLD 361



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SR I ++ + +Y  A + FD  ++         I R  AR  Q  L  A+SD+  A+  +
Sbjct: 198 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 257

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AIQD +  +E EP++   +  RG++  +  D+  A++D
Sbjct: 258 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 317

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            S  +         Y Y   A   IG+ K A+    K +  QLD+
Sbjct: 318 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 362



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 7/226 (3%)

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
           V +IQ  ++ +  +P  +D    RG+      DF  A  D S  ++ +    SAY   GL
Sbjct: 40  VLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRGL 99

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           A      +  A E + KA++ D   +  W ++        + + A   L +++ I  R++
Sbjct: 100 ARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRYT 159

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           KAY +RG +         A KD    + ID  + +    RA        Y++A  D+D A
Sbjct: 160 KAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADFDHA 219

Query: 646 LDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           + L   +   ++ + LA Y +       + +      +DI  DIDP
Sbjct: 220 IRLSTRNSGVYINRALARYHQ-------NNLRGAMSDYDIALDIDP 258



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D++++  P +  A   RG   +  ++  AAI D+  AIQ +P   +A+  RG     LG
Sbjct: 578 LDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 637

Query: 464 ESVEAIQDLSKALEF 478
            + + IQDLSKA E 
Sbjct: 638 NNRQGIQDLSKAGEL 652



 Score = 47.8 bits (112), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 12/184 (6%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           +I + + A+  +PN  +    R +  +  +DF +A+EDL+  + ++      Y    L  
Sbjct: 482 SIDEQTAAIVADPNDVNKRFARSLDFYLVQDFASAIEDLNQAIIIEGNFFPVYFNRALIR 541

Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
               EY+K E E  LK    +++ ++A           A+ E     L +V+ +   F  
Sbjct: 542 YKQLEYQKMEKEYDLKTNPGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 590

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RG +L  L  ++ AI D    + +DP   +  + R   +  +G  R+ I+D   A 
Sbjct: 591 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGIQDLSKAG 650

Query: 647 DLEL 650
           +L L
Sbjct: 651 ELGL 654



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 109/572 (19%), Positives = 222/572 (38%), Gaps = 78/572 (13%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
           N A C  + E +K    D DK + + P   +AY+++G     +  K++     EK +  A
Sbjct: 130 NMALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRG----EVDLKQKDTLAAEKDFGKA 185

Query: 134 L---HQSADL---KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSE 187
           +      AD    +  L L+       Q R    E D  +++  L+   SG+  N  ++ 
Sbjct: 186 IEIDRYDADTWASRAILRLQ-------QQRYKDAEADFDHAIR-LSTRNSGVYINRALAR 237

Query: 188 TSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSD-------------EAKGGSSV 234
             +N+ +  + D    + D+        ++  L   +               E +  + +
Sbjct: 238 YHQNNLRGAMSDYDI-ALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMM 296

Query: 235 PVSKSGLHIN------GKLRE----VSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
            +   GL ++      G +++    ++E  N          A R   ++    +D+F + 
Sbjct: 297 AIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVL 356

Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
              +DK +  + + +  + T +   +  SD         N  +Y K  ++DN+     E 
Sbjct: 357 KAQLDKQNGVDPNKQTADNTENNKTRKKSDK--------NMNNYRKIVVADNEEG---EE 405

Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
           + K  ++  +  +  N   +   F +T   K   +       + I  +N  K      I 
Sbjct: 406 KYKSDYRGRVQDKNVNIVPQ-PMFVLTYYEKHDDVKRQVNYYKFIETLNNQKVLPGRLII 464

Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
               +E P+  E        + F     A+I + T AI ++P+       R      + +
Sbjct: 465 TN--EEAPLTEEQ-----ATKHF-----ASIDEQTAAIVADPNDVNKRFARSLDFYLVQD 512

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
              AI+DL++A+  E N   +   R ++ +K  ++    ++    +K +   KSA     
Sbjct: 513 FASAIEDLNQAIIIEGNFFPVYFNRALIRYKQLEYQKMEKEYD--LKTNPGEKSA----- 565

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
                  +Y+  +    K I+L  +F+ A+ +       L +   A+    + + +D +F
Sbjct: 566 ---VKAADYEMVKRDLDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKF 622

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           + AY  RGL    LG +++ I+DLS    LG+
Sbjct: 623 ADAYFNRGLTHIFLGNNRQGIQDLSKAGELGL 654


>gi|434387356|ref|YP_007097967.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
 gi|428018346|gb|AFY94440.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
          Length = 607

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 135/342 (39%), Gaps = 6/342 (1%)

Query: 313 SDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKET------SNEAKRNK 366
           S    LND       + +  I +NK++ +     K  F   +   T      S   K   
Sbjct: 176 SGGPVLNDRGELIAVHGRGDIQENKATANANVFVKTGFNLGIPANTFVQIAGSMGVKIGG 235

Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           K      ++ ++ + D        +  +G Y  AI  FD+ +   P Y  A I R  A  
Sbjct: 236 KTAPVIATQPRTTTADDFFVTAATKFRQGDYPGAIQGFDRAIATKPNYTAAYIARAEANL 295

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +    E  I D   A+  NP + +A+  RG  +  +G++  A  DL +A+   P +    
Sbjct: 296 YLDNEEEVIRDANRALNLNPRSDDAYALRGGGKIGIGDAKGAFADLDRAIALNPRNPRGY 355

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
             RG    ++ D   A++ +   + +D     AY    +A   +GE + AE    +A+Q+
Sbjct: 356 FYRGFGQMQYGDPTQALQSIDKALAIDPNLSDAYAVRAVAKYLLGEPQAAESDFARALQI 415

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           + N   A+ +           E     LQ+ + I  + +  Y LRG      G + +AI 
Sbjct: 416 NANNFLAYVYRGFIRVVAGKKETGFADLQKAIAISPKNAIGYSLRGQAYANTGDYARAIS 475

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + +  L I P+       R   +     +++ + D + AL L
Sbjct: 476 EYNRALQIKPNYGSAYANRGVAHMQQQNFKQGLADVEKALKL 517



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 14/259 (5%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG  ++  G    A +  D+ +  +P  P     RG  +    +   A+    +A+  +P
Sbjct: 324 RGGGKIGIGDAKGAFADLDRAIALNPRNPRGYFYRGFGQMQYGDPTQALQSIDKALAIDP 383

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  +A+  R  A+  LGE   A  D ++AL+   N+      RG +            DL
Sbjct: 384 NLSDAYAVRAVAKYLLGEPQAAESDFARALQINANNFLAYVYRGFIRVVAGKKETGFADL 443

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-----GHLTQ-- 559
              + +  +N   Y+  G A ++ G+Y +A   + +A+Q+  N+  A+      H+ Q  
Sbjct: 444 QKAIAISPKNAIGYSLRGQAYANTGDYARAISEYNRALQIKPNYGSAYANRGVAHMQQQN 503

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           F Q LA+ EKAL+       ++     AY  R +        ++++ D +    I+ ++ 
Sbjct: 504 FKQGLADVEKALK-------LNPSNETAYQGRAIYYINQKDFRRSLADATRASQINGASP 556

Query: 620 ECLYLRASCYHAIGEYREA 638
           +   ++   Y  +G    A
Sbjct: 557 DSYVIQGVSYIGLGNRERA 575



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG---RGTARAFQRELEAAISDFTEAIQ 443
           RG  +V  GK  +    F  + K   + P+  IG   RG A A   +   AIS++  A+Q
Sbjct: 426 RGFIRVVAGKKETG---FADLQKAIAISPKNAIGYSLRGQAYANTGDYARAISEYNRALQ 482

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
             P+ G A+  RG A        + + D+ KAL+  P++      R I     KDF  ++
Sbjct: 483 IKPNYGSAYANRGVAHMQQQNFKQGLADVEKALKLNPSNETAYQGRAIYYINQKDFRRSL 542

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D +   +++  +  +Y   G++   +G  ++A+ A  KA QL     E  G+  + YQD
Sbjct: 543 ADATRASQINGASPDSYVIQGVSYIGLGNRERAKIALQKAAQL----YEKRGNRGKDYQD 598



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 61/134 (45%)

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G+Y  A +   +AI    N+  A+    +    L N E+ +    + L ++ R   AY L
Sbjct: 264 GDYPGAIQGFDRAIATKPNYTAAYIARAEANLYLDNEEEVIRDANRALNLNPRSDDAYAL 323

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RG    G+G  K A  DL   + ++P N    + R       G+  +A++  D AL ++ 
Sbjct: 324 RGGGKIGIGDAKGAFADLDRAIALNPRNPRGYFYRGFGQMQYGDPTQALQSIDKALAIDP 383

Query: 651 DSMEKFVLQCLAFY 664
           +  + + ++ +A Y
Sbjct: 384 NLSDAYAVRAVAKY 397


>gi|119357984|ref|YP_912628.1| hypothetical protein Cpha266_2203 [Chlorobium phaeobacteroides DSM
           266]
 gi|119355333|gb|ABL66204.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
          Length = 331

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 36/313 (11%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  ++ G  +++   Y  AI+   + +  D    +A   RG A+   R+   AI D+T+A
Sbjct: 16  DDNVNSGNQKIDANDYLGAIADLTKAIAIDAKNAQAYHDRGYAKKSMRDYSGAIDDYTKA 75

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I  N +   A+  RG  + A G+   AI+D +KAL+  P  A     RG+      D   
Sbjct: 76  ISLNSNFSAAYINRGYVKDATGDYSGAIEDYTKALQINPKEALAYVNRGLSKDSIGDLPG 135

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLT 558
           A+ D +  +++D +N  AY   G+  + IG ++ A     KAI+L  N ++A+   G   
Sbjct: 136 AIADYTKAIEIDPKNAPAYVNRGITTAKIGTFQNASADFTKAIELQPNMIQAFNNRGRAK 195

Query: 559 QFYQDL----ANSEKALEC-----------------------------LQQVLYIDKRFS 585
              +DL    A+  KA+E                                + + +D  F+
Sbjct: 196 MLMKDLSGAIADFTKAIEIDPKNPIGYFNRGSANSVIILRDKTDAITDFSKAIELDPNFA 255

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            AY  RG      G     I D+++ + ++P++    Y R +      +   A+ D++ A
Sbjct: 256 AAYTGRGNARIMSGDINGGIADMTTVIKLNPNDASAYYNRGAFKILNNDKNSALADFNKA 315

Query: 646 LDLELDSMEKFVL 658
           ++L+  + E + L
Sbjct: 316 IELDPKNAEMYKL 328



 Score = 92.0 bits (227), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 5/267 (1%)

Query: 359 SNEAKRNKKFCVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYP 415
           + ++ R+    +   +K+ S++ +F    ++RG  +   G Y+ AI  + + L+ +P   
Sbjct: 58  AKKSMRDYSGAIDDYTKAISLNSNFSAAYINRGYVKDATGDYSGAIEDYTKALQINPKEA 117

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
            A + RG ++    +L  AI+D+T+AI+ +P    A+  RG   A +G    A  D +KA
Sbjct: 118 LAYVNRGLSKDSIGDLPGAIADYTKAIEIDPKNAPAYVNRGITTAKIGTFQNASADFTKA 177

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           +E +PN     + RG      KD + A+ D +  +++D +N   Y   G A S I    K
Sbjct: 178 IELQPNMIQAFNNRGRAKMLMKDLSGAIADFTKAIEIDPKNPIGYFNRGSANSVIILRDK 237

Query: 536 AEEA--HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
            +      KAI+LD NF  A+           +    +  +  V+ ++   + AY+ RG 
Sbjct: 238 TDAITDFSKAIELDPNFAAAYTGRGNARIMSGDINGGIADMTTVIKLNPNDASAYYNRGA 297

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIE 620
                     A+ D +  + +DP N E
Sbjct: 298 FKILNNDKNSALADFNKAIELDPKNAE 324



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 2/238 (0%)

Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
           Y +  +  G  +    +   AI+D T+AI  +    +A+  RG A+ ++ +   AI D +
Sbjct: 14  YGDDNVNSGNQKIDANDYLGAIADLTKAIAIDAKNAQAYHDRGYAKKSMRDYSGAIDDYT 73

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           KA+    N +     RG V     D++ A+ED +  ++++ +   AY   GL+  SIG+ 
Sbjct: 74  KAISLNSNFSAAYINRGYVKDATGDYSGAIEDYTKALQINPKEALAYVNRGLSKDSIGDL 133

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
             A   + KAI++D     A+ +       +   + A     + + +     +A++ RG 
Sbjct: 134 PGAIADYTKAIEIDPKNAPAYVNRGITTAKIGTFQNASADFTKAIELQPNMIQAFNNRGR 193

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI--GEYREAIKDYDAALDLE 649
               +     AI D +  + IDP N    + R S    I   +  +AI D+  A++L+
Sbjct: 194 AKMLMKDLSGAIADFTKAIEIDPKNPIGYFNRGSANSVIILRDKTDAITDFSKAIELD 251



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 2/140 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA--FQRELEAAISDFTEAIQ 443
           +RG A++     + AI+ F + ++ DP  P     RG+A +    R+   AI+DF++AI+
Sbjct: 190 NRGRAKMLMKDLSGAIADFTKAIEIDPKNPIGYFNRGSANSVIILRDKTDAITDFSKAIE 249

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            +P+   A+  RG AR   G+    I D++  ++  PN A   + RG       D N+A+
Sbjct: 250 LDPNFAAAYTGRGNARIMSGDINGGIADMTTVIKLNPNDASAYYNRGAFKILNNDKNSAL 309

Query: 504 EDLSACVKLDKENKSAYTYL 523
            D +  ++LD +N   Y  L
Sbjct: 310 ADFNKAIELDPKNAEMYKLL 329


>gi|218438120|ref|YP_002376449.1| hypothetical protein PCC7424_1130 [Cyanothece sp. PCC 7424]
 gi|218170848|gb|ACK69581.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 271

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 35/245 (14%)

Query: 409 KEDPMYPEAL-----IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +  P  P+ L       +G  +    + + AI+DFT+AIQ  P+  +A+  R      LG
Sbjct: 27  QNQPSQPQELNAVEIYNKGVDKLSAGDYQGAIADFTQAIQLAPNDADAYYNRAYGYLILG 86

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
               AI D +KA+E  PN       R  V F  K++ AAV+D +  +  +      Y Y 
Sbjct: 87  NFEGAIADYTKAVEINPNYTYAYGNRCYVYFLSKNYEAAVKDCTTAISQETNYADFYIYR 146

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G A S + + ++A   + KAI+L                  AN+ K L            
Sbjct: 147 GNAKSGLNQDQEALADYNKAIEL-----------------AANNPKTL------------ 177

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            +KAY+ RGL+ +GL  H++AI D S  + ++P + +  Y R   Y+ +G  +EAI D +
Sbjct: 178 -AKAYYNRGLVHNGLENHQQAIADYSESIRLNPDDGDAYYNRGVTYYGLGNNQEAITDLE 236

Query: 644 AALDL 648
            A  L
Sbjct: 237 MAAQL 241



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 4/146 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G +  AI+ + + ++ +P Y  A   R       +  EAA+ D T AI    +  + +  
Sbjct: 86  GNFEGAIADYTKAVEINPNYTYAYGNRCYVYFLSKNYEAAVKDCTTAISQETNYADFYIY 145

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADIL----HERGIVNFKFKDFNAAVEDLSACV 510
           RG A++ L +  EA+ D +KA+E   N+   L    + RG+V+   ++   A+ D S  +
Sbjct: 146 RGNAKSGLNQDQEALADYNKAIELAANNPKTLAKAYYNRGLVHNGLENHQQAIADYSESI 205

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKA 536
           +L+ ++  AY   G+    +G  ++A
Sbjct: 206 RLNPDDGDAYYNRGVTYYGLGNNQEA 231


>gi|212691281|ref|ZP_03299409.1| hypothetical protein BACDOR_00772 [Bacteroides dorei DSM 17855]
 gi|237712290|ref|ZP_04542771.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|212666513|gb|EEB27085.1| tetratricopeptide repeat protein [Bacteroides dorei DSM 17855]
 gi|229453611|gb|EEO59332.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 669

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 117/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   +    RG A+    + + A SD +EAI+ NP    A++ RG
Sbjct: 39  YVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRG 98

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR        AI+D +KALEF+P +  + H   +   + +D+  A  DL   + +    
Sbjct: 99  LARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRY 158

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   AE+   KAI++DR   + W            + +A+  LQQ
Sbjct: 159 TKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTW------------ASRAILRLQQ 206

Query: 577 VLYID------------KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y D             R S  Y  R L  +     + A+ D    L IDP+N    Y 
Sbjct: 207 QRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDIDPNNFIGHYN 266

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D++  +++E D+M
Sbjct: 267 RGLLRAQVGDDNRAIQDFNFVIEMEPDNM 295



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 6/268 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ +  +A AI  + + L+ DP            R  Q + + A +D  + I  +P
Sbjct: 97  RGLARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISP 156

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG+      +++ A +D  KA+E +   AD    R I+  + + +  A  D 
Sbjct: 157 RYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADF 216

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
              ++L   N   Y    LA       + A   +  A+ +D  NF+   GH  +      
Sbjct: 217 DHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDIDPNNFI---GHYNRGLLRAQ 273

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + +  +A++    V+ ++     A   RGLLL   G +K AIKD S+ +   P+ +    
Sbjct: 274 VGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQ 333

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            RA     IG+ + A  D    L  +LD
Sbjct: 334 YRAQARRKIGDVKGADADEFKVLKAQLD 361



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SR I ++ + +Y  A + FD  ++         I R  AR  Q  L  A+SD+  A+  +
Sbjct: 198 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 257

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AIQD +  +E EP++   +  RG++  +  D+  A++D
Sbjct: 258 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 317

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            S  +         Y Y   A   IG+ K A+    K +  QLD+
Sbjct: 318 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 362



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 7/226 (3%)

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
           V +IQ  ++ +  +P  +D    RG+      DF  A  D S  ++ +    SAY   GL
Sbjct: 40  VLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRGL 99

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           A      +  A E + KA++ D   +  W ++        + + A   L +++ I  R++
Sbjct: 100 ARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRYT 159

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           KAY +RG +         A KD    + ID  + +    RA        Y++A  D+D A
Sbjct: 160 KAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADFDHA 219

Query: 646 LDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           + L   +   ++ + LA Y +       + +      +DI  DIDP
Sbjct: 220 IRLSTRNSGVYINRALARYHQ-------NNLRGAMSDYDIALDIDP 258



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D++++  P +  A   RG   +  ++  AAI D+  AIQ +P   +A+  RG     LG
Sbjct: 578 LDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 637

Query: 464 ESVEAIQDLSKALEF 478
            + + IQDLSKA E 
Sbjct: 638 NNRQGIQDLSKAGEL 652



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 12/184 (6%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           +I + + A+  +PN+ +    R +  +  +DF +A+EDL+  + ++      Y    L  
Sbjct: 482 SIDEQTAAIVADPNNVNKRFARSLDFYLVQDFASAIEDLNQAIIIEGNFFPVYFNRALIR 541

Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
               EY+K E E  LKA   +++ ++A           A+ E     L +V+ +   F  
Sbjct: 542 YKQLEYQKMEKEYDLKANPGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 590

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RG +L  L  ++ AI D    + +DP   +  + R   +  +G  R+ I+D   A 
Sbjct: 591 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGIQDLSKAG 650

Query: 647 DLEL 650
           +L L
Sbjct: 651 ELGL 654



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 109/572 (19%), Positives = 222/572 (38%), Gaps = 78/572 (13%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
           N A C  + E +K    D DK + + P   +AY+++G     +  K++     EK +  A
Sbjct: 130 NMALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRG----EVDLKQKDTLAAEKDFGKA 185

Query: 134 L---HQSADL---KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSE 187
           +      AD    +  L L+       Q R    E D  +++  L+   SG+  N  ++ 
Sbjct: 186 IEIDRYDADTWASRAILRLQ-------QQRYKDAEADFDHAIR-LSTRNSGVYINRALAR 237

Query: 188 TSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSD-------------EAKGGSSV 234
             +N+ +  + D    + D+        ++  L   +               E +  + +
Sbjct: 238 YHQNNLRGAMSDYDI-ALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMM 296

Query: 235 PVSKSGLHIN------GKLRE----VSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
            +   GL ++      G +++    ++E  N          A R   ++    +D+F + 
Sbjct: 297 AIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVL 356

Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
              +DK +  + + +  + T +   +  SD         N  +Y K  ++DN+     E 
Sbjct: 357 KAQLDKQNGVDPNKQTADNTENNKTRKKSDK--------NMNNYRKIVVADNEEG---EE 405

Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
           + K  ++  +  +  N   +   F +T   K   +       + I  +N  K      I 
Sbjct: 406 KYKSDYRGRVQDKNVNIVPQ-PMFVLTYYEKHDDVKRQVNYYKFIETLNNQKVLPGRLII 464

Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
               +E P+  E        + F     A+I + T AI ++P+       R      + +
Sbjct: 465 TN--EEAPLTEEQ-----ATKHF-----ASIDEQTAAIVADPNNVNKRFARSLDFYLVQD 512

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
              AI+DL++A+  E N   +   R ++ +K  ++    ++    +K +   KSA     
Sbjct: 513 FASAIEDLNQAIIIEGNFFPVYFNRALIRYKQLEYQKMEKEYD--LKANPGEKSA----- 565

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
                  +Y+  +    K I+L  +F+ A+ +       L +   A+    + + +D +F
Sbjct: 566 ---VKAADYEMVKRDLDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKF 622

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           + AY  RGL    LG +++ I+DLS    LG+
Sbjct: 623 ADAYFNRGLTHIFLGNNRQGIQDLSKAGELGL 654



 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 59/290 (20%), Positives = 121/290 (41%), Gaps = 20/290 (6%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  F+ +++ +P    A+  RG       + + AI D++  I   
Sbjct: 266 NRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKDYSTVINEY 325

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    ++ R QAR  +G+   A  D     EF+   A +  + G+      D N    D
Sbjct: 326 PNFLLGYQYRAQARRKIGDVKGADAD-----EFKVLKAQLDKQNGV------DPNKQTAD 374

Query: 506 LSACVKLDKE---NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
            +   K  K+   N + Y  + +A +  GE K   +   +    + N +     +  +Y+
Sbjct: 375 NTENNKTRKKSDKNMNNYRKIVVADNEEGEEKYKSDYRGRVQDKNVNIVPQPMFVLTYYE 434

Query: 563 ---DL---ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
              D+    N  K +E L     +  R         L      +H  +I + ++ +  DP
Sbjct: 435 KHDDVKRQVNYYKFIETLNNQKVLPGRLIITNEEAPLTEEQATKHFASIDEQTAAIVADP 494

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           +N+   + R+  ++ + ++  AI+D + A+ +E +    +  + L  Y++
Sbjct: 495 NNVNKRFARSLDFYLVQDFASAIEDLNQAIIIEGNFFPVYFNRALIRYKQ 544


>gi|406884144|gb|EKD31608.1| hypothetical protein ACD_77C00293G0006 [uncultured bacterium]
          Length = 337

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 123/264 (46%), Gaps = 6/264 (2%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A+  + + ++  P   EAL  RG A+   R+   AI D+  AIQ + +  +AW  RG
Sbjct: 71  YNGALDDYTKSIELKPEDAEALFYRGQAKEGLRKYRDAIEDYIRAIQIDSTNAKAWFSRG 130

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
             +  L    EAI DL+KA++ +P + +  + R        D+  A+ D S  + +   +
Sbjct: 131 SMKIKLRYYEEAIFDLTKAIDLDPRNPEAFYNRAEARRLTFDYYGAISDYSRDIDMSPND 190

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECL 574
             A+   GL  S++ ++  A+  + KA+  D + L  W +  +T+F   L + + A+   
Sbjct: 191 VYAFINRGLCKSNLKDFAGAQADYTKAVDSDPDLLSGWYNRGVTKF--ALEDYDGAIADF 248

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L +    + AY+ RGL    L     AI D +  LGIDP+N +    R       G+
Sbjct: 249 TKALEMSPNLTAAYNNRGLSKFSLKDLTGAISDYNKALGIDPANSKAYLNRGVAKQNAGD 308

Query: 635 YREAIKDYDAALDLELDSMEKFVL 658
              A +D+  A   EL   E F L
Sbjct: 309 KAGACEDWKKA--GELGEKEAFAL 330



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 7/190 (3%)

Query: 376 SKSISVDFRLSRGIAQVNEGK-----YASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +K+I +D R         E +     Y  AIS + + +   P    A I RG  ++  ++
Sbjct: 147 TKAIDLDPRNPEAFYNRAEARRLTFDYYGAISDYSRDIDMSPNDVYAFINRGLCKSNLKD 206

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
              A +D+T+A+ S+P     W  RG  + AL +   AI D +KALE  PN     + RG
Sbjct: 207 FAGAQADYTKAVDSDPDLLSGWYNRGVTKFALEDYDGAIADFTKALEMSPNLTAAYNNRG 266

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +  F  KD   A+ D +  + +D  N  AY   G+A  + G+   A E   KA +L    
Sbjct: 267 LSKFSLKDLTGAISDYNKALGIDPANSKAYLNRGVAKQNAGDKAGACEDWKKAGELGEK- 325

Query: 551 LEAWGHLTQF 560
            EA+  + +F
Sbjct: 326 -EAFALIKEF 334



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 4/223 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A+    KY  AI  + + ++ D    +A   RG+ +   R  E AI D T+AI  +P
Sbjct: 95  RGQAKEGLRKYRDAIEDYIRAIQIDSTNAKAWFSRGSMKIKLRYYEEAIFDLTKAIDLDP 154

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EA+  R +AR    +   AI D S+ ++  PN       RG+     KDF  A  D 
Sbjct: 155 RNPEAFYNRAEARRLTFDYYGAISDYSRDIDMSPNDVYAFINRGLCKSNLKDFAGAQADY 214

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDL 564
           +  V  D +  S +   G+   ++ +Y  A     KA+++  N   A+ +  L++F   L
Sbjct: 215 TKAVDSDPDLLSGWYNRGVTKFALEDYDGAIADFTKALEMSPNLTAAYNNRGLSKF--SL 272

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +   A+    + L ID   SKAY  RG+     G    A +D
Sbjct: 273 KDLTGAISDYNKALGIDPANSKAYLNRGVAKQNAGDKAGACED 315



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 88/180 (48%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           +AD+ +  G+     KD+N A+ D S  VKL+     A+  +  A  S+ +Y  A + + 
Sbjct: 20  TADVFYNSGLDKHNKKDYNGAISDYSNAVKLNPLLAIAWYNMASAKLSLEDYNGALDDYT 79

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           K+I+L     EA  +  Q  + L     A+E   + + ID   +KA+  RG +   L  +
Sbjct: 80  KSIELKPEDAEALFYRGQAKEGLRKYRDAIEDYIRAIQIDSTNAKAWFSRGSMKIKLRYY 139

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           ++AI DL+  + +DP N E  Y RA       +Y  AI DY   +D+  + +  F+ + L
Sbjct: 140 EEAIFDLTKAIDLDPRNPEAFYNRAEARRLTFDYYGAISDYSRDIDMSPNDVYAFINRGL 199


>gi|428221055|ref|YP_007105225.1| hypothetical protein Syn7502_00975 [Synechococcus sp. PCC 7502]
 gi|427994395|gb|AFY73090.1| tetratricopeptide repeat protein [Synechococcus sp. PCC 7502]
          Length = 286

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 120/284 (42%), Gaps = 37/284 (13%)

Query: 374 SKSKSISVD---FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +KSKS  ++   +   +G   + +  Y  AI+ +D  ++    YP+A   RGTA      
Sbjct: 4   TKSKSPEIENHHYWYDQGTVLLKQNLYVEAIASYDMAIEIHSEYPQAWYSRGTALRKSER 63

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            E AI+ +  AI+  PS  +AW  RG A   L +   A+    KA+ F+ +     + RG
Sbjct: 64  YEEAIASYDTAIKLKPSYYQAWNLRGVALFMLSQYQNALDSFDKAIGFKYDYYQAWNNRG 123

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
                                               L  +G+YK+A  ++ +AI+   NF
Sbjct: 124 ST----------------------------------LVGLGDYKEAILSYDEAIRFHPNF 149

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            +AW +     + L    KAL C ++ L       + ++ +G +L  L ++ +AI     
Sbjct: 150 YQAWNNRGNLLRKLQQFSKALTCYEEALKYQSNLYETWNNKGTVLASLERYDQAIAAYGQ 209

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
            + + P      Y R   +  +  Y+EAI  YD AL L+ +S E
Sbjct: 210 AIRVKPDYYLAWYNRGQVFVTLERYQEAIASYDQALKLQPESYE 253


>gi|423314011|ref|ZP_17291946.1| hypothetical protein HMPREF1058_02558 [Bacteroides vulgatus
           CL09T03C04]
 gi|392683609|gb|EIY76943.1| hypothetical protein HMPREF1058_02558 [Bacteroides vulgatus
           CL09T03C04]
          Length = 669

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 117/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   +    RG A+    + + A SD +EAI+ NP    A++ RG
Sbjct: 39  YVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRG 98

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR        AI+D +KALEF+P +  + H   +   + +D+  A  DL   + +    
Sbjct: 99  LARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRY 158

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   AE+   KAI++DR   + W            + +A+  LQQ
Sbjct: 159 TKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTW------------ASRAILRLQQ 206

Query: 577 VLYID------------KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y D             R S  Y  R L  +     + A+ D    L IDP+N    Y 
Sbjct: 207 QRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDIDPNNFIGHYN 266

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D++  +++E D+M
Sbjct: 267 RGLLRAQVGDDNRAIQDFNFVIEMEPDNM 295



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 6/268 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ +  +A AI  + + L+ DP            R  Q + + A +D  + I  +P
Sbjct: 97  RGLARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISP 156

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG+      +++ A +D  KA+E +   AD    R I+  + + +  A  D 
Sbjct: 157 RYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADF 216

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
              ++L   N   Y    LA       + A   +  A+ +D  NF+   GH  +      
Sbjct: 217 DHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDIDPNNFI---GHYNRGLLRAQ 273

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + +  +A++    V+ ++     A   RGLLL   G +K AIKD S+ +   P+ +    
Sbjct: 274 VGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQ 333

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            RA     IG+ + A  D    L  +LD
Sbjct: 334 YRAQARRKIGDVKGADADEFKVLKAQLD 361



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SR I ++ + +Y  A + FD  ++         I R  AR  Q  L  A+SD+  A+  +
Sbjct: 198 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 257

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AIQD +  +E EP++   +  RG++  +  D+  A++D
Sbjct: 258 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 317

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            S  +         Y Y   A   IG+ K A+    K +  QLD+
Sbjct: 318 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 362



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 7/226 (3%)

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
           V +IQ  ++ +  +P  +D    RG+      DF  A  D S  ++ +    SAY   GL
Sbjct: 40  VLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRGL 99

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           A      +  A E + KA++ D   +  W ++        + + A   L +++ I  R++
Sbjct: 100 ARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRYT 159

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           KAY +RG +         A KD    + ID  + +    RA        Y++A  D+D A
Sbjct: 160 KAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADFDHA 219

Query: 646 LDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           + L   +   ++ + LA Y +       + +      +DI  DIDP
Sbjct: 220 IRLSTRNSGVYINRALARYHQ-------NNLRGAMSDYDIALDIDP 258



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D++++  P +  A   RG   +  ++  AAI D+  AIQ +P   +A+  RG     LG
Sbjct: 578 LDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 637

Query: 464 ESVEAIQDLSKALEF 478
            + + IQDLSKA E 
Sbjct: 638 NNRQGIQDLSKAGEL 652



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 12/184 (6%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           +I + + A+  +PN  +    R +  +  +DF +A+EDL+  + ++      Y    L  
Sbjct: 482 SIDEQTAAIVADPNDVNKRFARSLDFYLVQDFASAIEDLNQAIIIEDHFFPVYFNRALIR 541

Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
               EY+K E E  LKA   +++ ++A           A+ E     L +V+ +   F  
Sbjct: 542 YKQLEYQKMEKEYDLKAGLGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 590

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RG +L  L  ++ AI D    + +DP   +  + R   +  +G  R+ I+D   A 
Sbjct: 591 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGIQDLSKAG 650

Query: 647 DLEL 650
           +L L
Sbjct: 651 ELGL 654



 Score = 42.7 bits (99), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 109/574 (18%), Positives = 222/574 (38%), Gaps = 82/574 (14%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
           N A C  + E +K    D DK + + P   +AY+++G     +  K++     EK +  A
Sbjct: 130 NMALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRG----EVDLKQKDTLAAEKDFGKA 185

Query: 134 L---HQSADL---KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSE 187
           +      AD    +  L L+       Q R    E D  +++  L+   SG+  N  ++ 
Sbjct: 186 IEIDRYDADTWASRAILRLQ-------QQRYKDAEADFDHAIR-LSTRNSGVYINRALAR 237

Query: 188 TSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSD-------------EAKGGSSV 234
             +N+ +  + D    + D+        ++  L   +               E +  + +
Sbjct: 238 YHQNNLRGAMSDYDI-ALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMM 296

Query: 235 PVSKSGLHIN------GKLRE----VSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
            +   GL ++      G +++    ++E  N          A R   ++    +D+F + 
Sbjct: 297 AIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVL 356

Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
              +DK +  + + +  + T +   +  SD         N  +Y K  ++DN+     E 
Sbjct: 357 KAQLDKQNGVDPNKQTADNTENNKTRKKSDK--------NMNNYRKIVVADNEEG---EE 405

Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
           + K  ++  +  +  N   +   F +T   K   +       + I  +N  K      I 
Sbjct: 406 KYKSDYRGRVQDKNVNIVPQ-PMFVLTYYEKHDDVKRQVNYYKFIETLNNQKVLPGRLII 464

Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
               +E P+  E        + F     A+I + T AI ++P+       R      + +
Sbjct: 465 TN--EEAPLTEEQ-----ATKHF-----ASIDEQTAAIVADPNDVNKRFARSLDFYLVQD 512

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE--DLSACVKLDKENKSAYTY 522
              AI+DL++A+  E +   +   R ++ +K  ++    +  DL A +      K+A   
Sbjct: 513 FASAIEDLNQAIIIEDHFFPVYFNRALIRYKQLEYQKMEKEYDLKAGLGEKSAVKAA--- 569

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
                    +Y+  +    K I+L  +F+ A+ +       L +   A+    + + +D 
Sbjct: 570 ---------DYEMVKRDLDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDP 620

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           +F+ AY  RGL    LG +++ I+DLS    LG+
Sbjct: 621 KFADAYFNRGLTHIFLGNNRQGIQDLSKAGELGL 654


>gi|411119046|ref|ZP_11391426.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410710909|gb|EKQ68416.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 502

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 137/317 (43%), Gaps = 9/317 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSN 445
           RGIA  + G+Y  AI+ +DQ +   P +  A   RG +     R +EA +S + + +Q  
Sbjct: 112 RGIALHHLGRYEEAIASYDQAVTILPDFHTAWYNRGLSLEKLDRTVEA-LSSYDKVVQLR 170

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW+ R +    L    EA+      ++   + A    +RG V  +  D  AA+  
Sbjct: 171 PDHAQAWRHRSKLLHTLKRYNEALSSYDYLIDLNTDDAKAWQQRGDVLKEMGDLEAALRS 230

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L  E+ S +      L  +  Y +  ++  KA++L+ N  +AW         L 
Sbjct: 231 YDTALHLMPEDASLWGDRASVLVDLQRYPEGLDSLEKALELNPNDAKAWSLRAIACAKLQ 290

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++AL   ++ + I       + +R LL   L Q ++ ++     L ++P ++E    +
Sbjct: 291 RQDEALASCERAIQIQADDYYPWRIRALLFRDLHQFEEEVESCERALALNPKDVELWVHQ 350

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
           A+    +  Y  AI  YD ALDL+             +YQ+ +AL    + +S    FD 
Sbjct: 351 ATALKKLHRYEAAIASYDKALDLQPGD-------ATLWYQRGLALRRLGRFDSAIANFDR 403

Query: 686 DGDIDPLFKEYWCKRLH 702
              +DP F      RL+
Sbjct: 404 ALTLDPDFHPATQSRLY 420



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 121/261 (46%), Gaps = 3/261 (1%)

Query: 405 DQILKED--PMYPEALIGR-GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           +QI  ED  P +   L+ + G  +A  ++ E AI+ +T+A++  P+   AW  R  A   
Sbjct: 25  EQIQSEDTPPEFKAFLLFQEGRLQADAQQFEEAIALYTQALELKPNYYRAWSDRADALKR 84

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           LG   EA+ +  +A+   P+     + RGI       +  A+      V +  +  +A+ 
Sbjct: 85  LGRYEEAVDNCDRAIALCPDRHSAWNHRGIALHHLGRYEEAIASYDQAVTILPDFHTAWY 144

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             GL+L  +    +A  ++ K +QL  +  +AW H ++    L    +AL     ++ ++
Sbjct: 145 NRGLSLEKLDRTVEALSSYDKVVQLRPDHAQAWRHRSKLLHTLKRYNEALSSYDYLIDLN 204

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
              +KA+  RG +L  +G  + A++   + L + P +      RAS    +  Y E +  
Sbjct: 205 TDDAKAWQQRGDVLKEMGDLEAALRSYDTALHLMPEDASLWGDRASVLVDLQRYPEGLDS 264

Query: 642 YDAALDLELDSMEKFVLQCLA 662
            + AL+L  +  + + L+ +A
Sbjct: 265 LEKALELNPNDAKAWSLRAIA 285



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/286 (19%), Positives = 125/286 (43%), Gaps = 3/286 (1%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    ++ +I  DF  +   RG++     +   A+S +D++++  P + +A   R    
Sbjct: 125 AIASYDQAVTILPDFHTAWYNRGLSLEKLDRTVEALSSYDKVVQLRPDHAQAWRHRSKLL 184

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
              +    A+S +   I  N    +AW++RG     +G+   A++    AL   P  A +
Sbjct: 185 HTLKRYNEALSSYDYLIDLNTDDAKAWQQRGDVLKEMGDLEAALRSYDTALHLMPEDASL 244

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
             +R  V    + +   ++ L   ++L+  +  A++   +A + +    +A  +  +AIQ
Sbjct: 245 WGDRASVLVDLQRYPEGLDSLEKALELNPNDAKAWSLRAIACAKLQRQDEALASCERAIQ 304

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +  +    W      ++DL   E+ +E  ++ L ++ +  + +  +   L  L +++ AI
Sbjct: 305 IQADDYYPWRIRALLFRDLHQFEEEVESCERALALNPKDVELWVHQATALKKLHRYEAAI 364

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
                 L + P +    Y R      +G +  AI ++D AL L+ D
Sbjct: 365 ASYDKALDLQPGDATLWYQRGLALRRLGRFDSAIANFDRALTLDPD 410


>gi|345512965|ref|ZP_08792489.1| TPR repeat-containing protein [Bacteroides dorei 5_1_36/D4]
 gi|423240163|ref|ZP_17221278.1| hypothetical protein HMPREF1065_01901 [Bacteroides dorei
           CL03T12C01]
 gi|229434955|gb|EEO45032.1| TPR repeat-containing protein [Bacteroides dorei 5_1_36/D4]
 gi|392645152|gb|EIY38886.1| hypothetical protein HMPREF1065_01901 [Bacteroides dorei
           CL03T12C01]
          Length = 669

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 117/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   +    RG A+    + + A SD +EAI+ NP    A++ RG
Sbjct: 39  YVLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRG 98

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR        AI+D +KALEF+P +  + H   +   + +D+  A  DL   + +    
Sbjct: 99  LARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRY 158

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   AE+   KAI++DR   + W            + +A+  LQQ
Sbjct: 159 TKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTW------------ASRAILRLQQ 206

Query: 577 VLYID------------KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y D             R S  Y  R L  +     + A+ D    L IDP+N    Y 
Sbjct: 207 QRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDIDPNNFIGHYN 266

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D++  +++E D+M
Sbjct: 267 RGLLRAQVGDDNRAIQDFNFVIEMEPDNM 295



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 6/268 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ +  +A AI  + + L+ DP            R  Q + + A +D  + I  +P
Sbjct: 97  RGLARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISP 156

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RG+      +++ A +D  KA+E +   AD    R I+  + + +  A  D 
Sbjct: 157 RYTKAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADF 216

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
              ++L   N   Y    LA       + A   +  A+ +D  NF+   GH  +      
Sbjct: 217 DHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDIDPNNFI---GHYNRGLLRAQ 273

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + +  +A++    V+ ++     A   RGLLL   G +K AIKD S+ +   P+ +    
Sbjct: 274 VGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQ 333

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            RA     IG+ + A  D    L  +LD
Sbjct: 334 YRAQARRKIGDVKGADADEFKVLKAQLD 361



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SR I ++ + +Y  A + FD  ++         I R  AR  Q  L  A+SD+  A+  +
Sbjct: 198 SRAILRLQQQRYKDAEADFDHAIRLSTRNSGVYINRALARYHQNNLRGAMSDYDIALDID 257

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AIQD +  +E EP++   +  RG++  +  D+  A++D
Sbjct: 258 PNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMMAIFNRGLLLDQTGDYKGAIKD 317

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            S  +         Y Y   A   IG+ K A+    K +  QLD+
Sbjct: 318 YSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVLKAQLDK 362



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 7/226 (3%)

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
           V +IQ  ++ +  +P  +D    RG+      DF  A  D S  ++ +    SAY   GL
Sbjct: 40  VLSIQYFNQVINAKPYLSDPYFYRGLAKINLDDFQGAESDCSEAIERNPFVVSAYQVRGL 99

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           A      +  A E + KA++ D   +  W ++        + + A   L +++ I  R++
Sbjct: 100 ARIQQNNFAGAIEDYTKALEFDPENIGVWHNMALCRIRQEDYKGAKNDLDKLIAISPRYT 159

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           KAY +RG +         A KD    + ID  + +    RA        Y++A  D+D A
Sbjct: 160 KAYLMRGEVDLKQKDTLAAEKDFGKAIEIDRYDADTWASRAILRLQQQRYKDAEADFDHA 219

Query: 646 LDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           + L   +   ++ + LA Y +       + +      +DI  DIDP
Sbjct: 220 IRLSTRNSGVYINRALARYHQ-------NNLRGAMSDYDIALDIDP 258



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D++++  P +  A   RG   +  ++  AAI D+  AIQ +P   +A+  RG     LG
Sbjct: 578 LDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLG 637

Query: 464 ESVEAIQDLSKALEF 478
            + + IQDLSKA E 
Sbjct: 638 NNRQGIQDLSKAGEL 652



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 12/184 (6%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           +I + + A+  +PN  +    R +  +  +DF +A+EDL+  + ++      Y    L  
Sbjct: 482 SIDEQTAAIVADPNDVNKRFARSLDFYLVQDFASAIEDLNQAIIIEGNFFPVYFNRALIR 541

Query: 528 SSIGEYKKAE-EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
               EY+K E E  LKA   +++ ++A           A+ E     L +V+ +   F  
Sbjct: 542 YKQLEYQKMEKEYDLKANPGEKSAVKA-----------ADYEMVKRDLDKVIELAPDFVY 590

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RG +L  L  ++ AI D    + +DP   +  + R   +  +G  R+ I+D   A 
Sbjct: 591 AYYNRGNVLSILKDYRAAIVDYDRAIQLDPKFADAYFNRGLTHIFLGNNRQGIQDLSKAG 650

Query: 647 DLEL 650
           +L L
Sbjct: 651 ELGL 654



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 109/572 (19%), Positives = 222/572 (38%), Gaps = 78/572 (13%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHA 133
           N A C  + E +K    D DK + + P   +AY+++G     +  K++     EK +  A
Sbjct: 130 NMALCRIRQEDYKGAKNDLDKLIAISPRYTKAYLMRG----EVDLKQKDTLAAEKDFGKA 185

Query: 134 L---HQSADL---KQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSE 187
           +      AD    +  L L+       Q R    E D  +++  L+   SG+  N  ++ 
Sbjct: 186 IEIDRYDADTWASRAILRLQ-------QQRYKDAEADFDHAIR-LSTRNSGVYINRALAR 237

Query: 188 TSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSD-------------EAKGGSSV 234
             +N+ +  + D    + D+        ++  L   +               E +  + +
Sbjct: 238 YHQNNLRGAMSDYDI-ALDIDPNNFIGHYNRGLLRAQVGDDNRAIQDFNFVIEMEPDNMM 296

Query: 235 PVSKSGLHIN------GKLRE----VSENHNGSSDGSKSTHASRDASEINRQSSDDFDIC 284
            +   GL ++      G +++    ++E  N          A R   ++    +D+F + 
Sbjct: 297 AIFNRGLLLDQTGDYKGAIKDYSTVINEYPNFLLGYQYRAQARRKIGDVKGADADEFKVL 356

Query: 285 NGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES 344
              +DK +  + + +  + T +   +  SD         N  +Y K  ++DN+     E 
Sbjct: 357 KAQLDKQNGVDPNKQTADNTENNKTRKKSDK--------NMNNYRKIVVADNEEG---EE 405

Query: 345 RSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIF 404
           + K  ++  +  +  N   +   F +T   K   +       + I  +N  K      I 
Sbjct: 406 KYKSDYRGRVQDKNVNIVPQ-PMFVLTYYEKHDDVKRQVNYYKFIETLNNQKVLPGRLII 464

Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGE 464
               +E P+  E        + F     A+I + T AI ++P+       R      + +
Sbjct: 465 TN--EEAPLTEEQ-----ATKHF-----ASIDEQTAAIVADPNDVNKRFARSLDFYLVQD 512

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
              AI+DL++A+  E N   +   R ++ +K  ++    ++    +K +   KSA     
Sbjct: 513 FASAIEDLNQAIIIEGNFFPVYFNRALIRYKQLEYQKMEKEYD--LKANPGEKSA----- 565

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
                  +Y+  +    K I+L  +F+ A+ +       L +   A+    + + +D +F
Sbjct: 566 ---VKAADYEMVKRDLDKVIELAPDFVYAYYNRGNVLSILKDYRAAIVDYDRAIQLDPKF 622

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           + AY  RGL    LG +++ I+DLS    LG+
Sbjct: 623 ADAYFNRGLTHIFLGNNRQGIQDLSKAGELGL 654


>gi|384210297|ref|YP_005596017.1| hypothetical protein Bint_2843 [Brachyspira intermedia PWS/A]
 gi|343387947|gb|AEM23437.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 233

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 101/187 (54%), Gaps = 7/187 (3%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           EGKY  AI  +++ ++ DP Y  A   RG+ +A   E E AI D+  AI+ + +   A+ 
Sbjct: 26  EGKYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYN 85

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG A+  LGE  EAI+D  KA+E + + +D  + RGIV      +  +++D +  ++L+
Sbjct: 86  NRGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELN 145

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---FLEAWG----HLTQFYQDLAN 566
             +  AY   G     +G+Y +A + + KAI+L+ N   F    G    +L ++ + L +
Sbjct: 146 PNDSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKD 205

Query: 567 SEKALEC 573
            +KALE 
Sbjct: 206 YKKALEL 212



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 5/189 (2%)

Query: 367 KFCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           K+    +  +K+I +D   S     RG  + + G+Y  AI  +D  ++ D  Y  A   R
Sbjct: 28  KYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNR 87

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G A+ +  E E AI D+ +AI+ +    +A+  RG  +  LG+  ++I+D +K +E  PN
Sbjct: 88  GLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELNPN 147

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            +D  + RG V      +  A++D    ++L+  N + Y   G++  ++ EY +A + + 
Sbjct: 148 DSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKDYK 207

Query: 542 KAIQLDRNF 550
           KA++LD N+
Sbjct: 208 KALELDPNY 216



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G+  EAI   +KA+E +PN +   + RG V     ++  A++D    ++LD     AY  
Sbjct: 27  GKYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNN 86

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            GLA   +GEY++A + + KAI+LD ++ +A+ +       L   E +++   +V+ ++ 
Sbjct: 87  RGLAKDYLGEYEEAIKDYDKAIELDSDYSDAYNNRGIVKNVLGKYEDSIKDFNKVIELNP 146

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
             S AY+ RG +   LG++ +AIKD    + ++P+N      R      + EY EA+KDY
Sbjct: 147 NDSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAFYNNRGVSKENLEEYNEALKDY 206

Query: 643 DAALDLE 649
             AL+L+
Sbjct: 207 KKALELD 213


>gi|345302037|ref|YP_004823939.1| hypothetical protein Rhom172_0153 [Rhodothermus marinus
           SG0.5JP17-172]
 gi|345111270|gb|AEN72102.1| Tetratricopeptide TPR_2 repeat-containing protein [Rhodothermus
           marinus SG0.5JP17-172]
          Length = 465

 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 7/267 (2%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            E A+      +  +P+A +AW RRG   + LG   EA+Q   +AL   P   + L   G
Sbjct: 54  FEDALGAIDRLLALHPTASDAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLG 113

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           I       F  A++     +++D  N   Y  LG+ L  +   ++A +A  +A +L+ + 
Sbjct: 114 ITLDNLGRFEEALQTYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDH 173

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            E W  L   Y  L + E++L C  + L +D   + A++ RG++L+ +G+ ++A++    
Sbjct: 174 PEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRFREAVESYDY 233

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
            L I        Y R +    +G+ R AI+ Y+  L++E      +    LA+  +E+  
Sbjct: 234 ALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAY--EELQE 291

Query: 671 YTASKINSEFCWFDIDGDIDPLFKEYW 697
           Y  +       +F +  + DP + E W
Sbjct: 292 YETA-----IQYFQLALEEDPAYAEAW 313



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 125/262 (47%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI   N G++  A+  +++ L+ DP+  E     G        LE A+    EA + NP 
Sbjct: 113 GITLDNLGRFEEALQTYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPD 172

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             E W   G     LG+   ++    + LE +P SAD  + RGIV  +   F  AVE   
Sbjct: 173 HPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRFREAVESYD 232

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + + ++  SA+   G AL+++G+ + A E++ K ++++      + ++   Y++L   
Sbjct: 233 YALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEY 292

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E A++  Q  L  D  +++A++  G     L + ++AI  +   + + P   E  Y +A 
Sbjct: 293 ETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKAD 352

Query: 628 CYHAIGEYREAIKDYDAALDLE 649
           C +     ++A++ Y   ++L+
Sbjct: 353 CEYNARRLQDALQSYRRVIELD 374



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/405 (21%), Positives = 170/405 (41%), Gaps = 14/405 (3%)

Query: 346 SKLSFKWDMLKETSNEAKRNKKF-----CVTRISKSKSISVDFRLSRGIAQVNEGKYASA 400
           S   F  D L+E +       +F      + R+      + D  + RGI   + G++  A
Sbjct: 32  SSAYFDSDTLEEIATYYYERGRFEDALGAIDRLLALHPTASDAWMRRGILLSHLGRHEEA 91

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           +  +++ L  +P   E L+  G         E A+  +  A+Q +P   E +   G    
Sbjct: 92  LQAYERALSLNPTDTETLVNLGITLDNLGRFEEALQTYERALQIDPLNDEIYYNLGITLE 151

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +    EA+Q L +A    P+  ++ +E G    +  D   ++      ++LD  +  A+
Sbjct: 152 RMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAW 211

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              G+ L+ +G +++A E++  A+ +  +F  AW +      +L +   A+E  ++VL I
Sbjct: 212 YNRGIVLNRMGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEI 271

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           +      Y+   L    L +++ AI+     L  DP+  E  Y    CY A+  + EAI 
Sbjct: 272 EGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIA 331

Query: 641 DYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
             + A+ L+ ++ E        +Y K    Y A ++      +    ++DP  ++ W   
Sbjct: 332 CMERAVTLQPETSE-------FWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWLD- 383

Query: 701 LHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADS 745
            + + + E  Y +  L+   +   L     +  +Q  ALL +  S
Sbjct: 384 -YAETLLEAGYVEESLQAYRQALTLNPDARAYIRQARALLALGRS 427



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 57/276 (20%), Positives = 111/276 (40%), Gaps = 48/276 (17%)

Query: 355 LKETSNEAKRNKKFCVTRISKSKSI--SVDFRLS-----------RGIAQVNEGKYASAI 401
           L   S +A  N+   + R+ + +    S D+ L+           RG A  N G    AI
Sbjct: 203 LDPYSADAWYNRGIVLNRMGRFREAVESYDYALAIQEDFGSAWYNRGNALTNLGDLRGAI 262

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
             ++++L+ +   P        A    +E E AI  F  A++ +P+  EAW   G    A
Sbjct: 263 ESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDA 322

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           L    EAI  + +A+  +P +++  + +    +  +    A++     ++LD +N+ A+ 
Sbjct: 323 LERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWL 382

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
                L   G  +++ +A+ +A+ L+ +                                
Sbjct: 383 DYAETLLEAGYVEESLQAYRQALTLNPD-------------------------------- 410

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              ++AY  +   L  LG+ ++ I+ L   L +DPS
Sbjct: 411 ---ARAYIRQARALLALGRSEEGIRSLKMALRLDPS 443


>gi|189184045|ref|YP_001937830.1| TPR repeat-containing protein 01_07 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189184392|ref|YP_001938177.1| TPR repeat-containing protein 01_09 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180816|dbj|BAG40596.1| TPR repeat-containing protein 01_07 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189181163|dbj|BAG40943.1| TPR repeat-containing protein 01_09 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 381

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 2/263 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARA-FQRELEAAISDFTEAIQSNPSAGEAWKR 454
           KY  AI  FD  +K DP Y  A   +G A A   + LEA + ++  AI+  P   EA+  
Sbjct: 57  KYHEAIENFDIAIKHDPSYASAYNSKGIALADLGKALEA-VENYDLAIKHKPHFAEAYNN 115

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +  +   LG++ EAI     A++++PN     + +G        +  AVE+    ++ + 
Sbjct: 116 KAVSYRKLGKNEEAIILCDLAIKYKPNYVTAYNNKGAALNNLGRYEEAVENFDVAIRYNS 175

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
               AY   G+AL  +G  ++A E +  AI+   N+ EA+ +       L   +KA+E  
Sbjct: 176 SYPEAYYNKGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHF 235

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
              +  D   + AY  +G +L  L ++ +AI+  +  +  +P+  E  Y R   +  +GE
Sbjct: 236 DLAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFEKLGE 295

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
            ++AI++YD A+  + +  E ++
Sbjct: 296 QQKAIENYDIAIKYKPNFAENYL 318



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 105/225 (46%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GK   AI + D  +K  P Y  A   +G A       E A+ +F  AI+ N S  EA+  
Sbjct: 124 GKNEEAIILCDLAIKYKPNYVTAYNNKGAALNNLGRYEEAVENFDVAIRYNSSYPEAYYN 183

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   LG   EAI++   A+ + PN ++  H +G+       F  A+E     +K D 
Sbjct: 184 KGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYDP 243

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            + +AY   G  LS +  Y +A E+   AI+ + N  EA+      ++ L   +KA+E  
Sbjct: 244 NDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFEKLGEQQKAIENY 303

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +     F++ Y  +G+ L  LGQ+ KA ++    +   P+ I
Sbjct: 304 DIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFKLAIKYMPNFI 348



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 1/200 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GIA +  G    AI  +D  ++  P Y EA   +G   AF  + + AI  F  AI+ +
Sbjct: 183 NKGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYD 242

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  +G   + L    EAI+  + A+++ PN A+  + RG++  K  +   A+E+
Sbjct: 243 PNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFEKLGEQQKAIEN 302

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K        Y   G++L S+G+Y KA+E    AI+   NF+  +    +   +L 
Sbjct: 303 YDIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFKLAIKYMPNFIAEYEATIKRLTELE 362

Query: 566 NSEKALECLQQVLYIDKRFS 585
           N   A E  +Q L I K++S
Sbjct: 363 NFTIAKE-FEQKLQILKKYS 381



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 11/117 (9%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQS 66
           RL K H+ I   D  ++ D   ASA  ++ I LA L     ++ N+  AI+      A++
Sbjct: 54  RLKKYHEAIENFDIAIKHDPSYASAYNSKGIALADLGKALEAVENYDLAIK-HKPHFAEA 112

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEAL 123
           Y      N+A  Y +L  ++  I  CD A++  P  + AY  KG A + LGR EEA+
Sbjct: 113 YN-----NKAVSYRKLGKNEEAIILCDLAIKYKPNYVTAYNNKGAALNNLGRYEEAV 164



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQD---ICNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
           L  L  + KAI   D  LA  Y+  D    CN+ +  S L+ +   I  C+ A++ +P  
Sbjct: 222 LAFLGQFQKAIEHFD--LAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNC 279

Query: 103 LQAYILKGCAFSALGRKEEALSVWE 127
            +AY  +G  F  LG +++A+  ++
Sbjct: 280 AEAYYRRGMIFEKLGEQQKAIENYD 304


>gi|88602246|ref|YP_502424.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88187708|gb|ABD40705.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 635

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 130/277 (46%), Gaps = 3/277 (1%)

Query: 373 ISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           I KS +I  +  LS   +G    N  +Y  AI+ FD++L +DP    A + +G +     
Sbjct: 207 IEKSLTIQPELTLSWLYKGFIHHNRKEYEEAITCFDKVLAKDPFQIRAWLFKGYSLFHLH 266

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + + A+  F   I+ +     A   +G     L    EA      A++  P   ++   R
Sbjct: 267 QDDKALECFDRVIKEDRKQLRAIIYKGYCLKNLKRYKEAGNAFDNAIQLSPRDLNLRLNR 326

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           GI  F+ K F  A+      ++LDK N SA+ Y   +L  +   ++A ++  K +++   
Sbjct: 327 GICLFEDKQFYEALNAFDKVLELDKRNLSAWLYKIRSLIRMERIQEAFQSSGKLLEIQPR 386

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
            +  W         +   E+AL+  ++ L +DK     + LRGL  + LG+  +A++   
Sbjct: 387 EVSVWLARADLLLKMKKVEEALDATKKSLLLDKWNPDTWSLRGLCFYKLGKFNEALQCYD 446

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           + L I+P +++ +  RA C H +  + +A++ Y+ A+
Sbjct: 447 NALKINPKHLDAMKNRALCLHKLKRHSDALEYYEHAI 483



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 122/268 (45%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           ++ RL+RGI    + ++  A++ FD++L+ D     A + +  +      ++ A     +
Sbjct: 320 LNLRLNRGICLFEDKQFYEALNAFDKVLELDKRNLSAWLYKIRSLIRMERIQEAFQSSGK 379

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            ++  P     W  R      + +  EA+    K+L  +  + D    RG+  +K   FN
Sbjct: 380 LLEIQPREVSVWLARADLLLKMKKVEEALDATKKSLLLDKWNPDTWSLRGLCFYKLGKFN 439

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A++     +K++ ++  A     L L  +  +  A E +  AI  + + +EAW +    
Sbjct: 440 EALQCYDNALKINPKHLDAMKNRALCLHKLKRHSDALEYYEHAIAGNPHNIEAWFNRGLI 499

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
                N ++AL    +V+ +DK  +KAY  +GL+   L Q+ +A++  S    +DPS   
Sbjct: 500 LHKAKNYDEALHSYDKVIELDKFHAKAYFNKGLIHRQLEQYFEALQAFSQATSVDPSFAS 559

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
             Y     Y  +  ++EA++ YD  L L
Sbjct: 560 AWYHMGLIYTDLVRHKEALQCYDKTLKL 587



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 34/229 (14%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+     GK+  A+  +D  LK +P + +A+  R       +    A+  +  AI  NP
Sbjct: 428 RGLCFYKLGKFNEALQCYDNALKINPKHLDAMKNRALCLHKLKRHSDALEYYEHAIAGNP 487

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EAW  RG                            ILH       K K+++ A+   
Sbjct: 488 HNIEAWFNRGL---------------------------ILH-------KAKNYDEALHSY 513

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++LDK +  AY   GL    + +Y +A +A  +A  +D +F  AW H+   Y DL  
Sbjct: 514 DKVIELDKFHAKAYFNKGLIHRQLEQYFEALQAFSQATSVDPSFASAWYHMGLIYTDLVR 573

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
            ++AL+C  + L ++ +   A   +G++L   G  K+A         +D
Sbjct: 574 HKEALQCYDKTLKLNPKHIGALLNKGVILEDAGLKKEAFMCFQKAANLD 622



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/277 (19%), Positives = 116/277 (41%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R+ K     +   + +G    N  +Y  A + FD  ++  P      + RG      
Sbjct: 274 CFDRVIKEDRKQLRAIIYKGYCLKNLKRYKEAGNAFDNAIQLSPRDLNLRLNRGICLFED 333

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++   A++ F + ++ +     AW  + ++   +    EA Q   K LE +P    +   
Sbjct: 334 KQFYEALNAFDKVLELDKRNLSAWLYKIRSLIRMERIQEAFQSSGKLLEIQPREVSVWLA 393

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           R  +  K K    A++     + LDK N   ++  GL    +G++ +A + +  A++++ 
Sbjct: 394 RADLLLKMKKVEEALDATKKSLLLDKWNPDTWSLRGLCFYKLGKFNEALQCYDNALKINP 453

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             L+A  +       L     ALE  +  +  +    +A+  RGL+LH    + +A+   
Sbjct: 454 KHLDAMKNRALCLHKLKRHSDALEYYEHAIAGNPHNIEAWFNRGLILHKAKNYDEALHSY 513

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
              + +D  + +  + +   +  + +Y EA++ +  A
Sbjct: 514 DKVIELDKFHAKAYFNKGLIHRQLEQYFEALQAFSQA 550


>gi|182677316|ref|YP_001831462.1| hypothetical protein Bind_0319 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633199|gb|ACB93973.1| TPR repeat-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 301

 Score = 94.7 bits (234), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 62/196 (31%), Positives = 90/196 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A    GKY+ AIS F Q +K DP    A   R  A       +AA++DF  AI+ N
Sbjct: 90  TRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYTNRALAYRQSNRNDAALADFNRAIEVN 149

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  R       G   EA  DL +A++  P +A   H RG++  +  +   A+ D
Sbjct: 150 PRHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLNPENAQAFHARGLIYQREGNQPQAITD 209

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +  D    + Y   G +L + G+Y KA E    A+ +D    +AW  L   Y+   
Sbjct: 210 FDNAIDRDPFAGAPYLARGQSLIATGKYDKAIEDFNAALHVDNKNPDAWAGLGLAYEKSG 269

Query: 566 NSEKALECLQQVLYID 581
           N  KA E  Q+ L  D
Sbjct: 270 NRTKAAESYQRALTFD 285



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/221 (25%), Positives = 101/221 (45%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +E  A ++  ++ +  NP + EA+  RG A A LG+  EAI D S+A++ +PN+A     
Sbjct: 65  QEASANLASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIKLDPNNAPAYTN 124

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           R +   +    +AA+ D +  ++++  +  AY      L   G   +A+    +AI+L+ 
Sbjct: 125 RALAYRQSNRNDAALADFNRAIEVNPRHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLNP 184

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              +A+      YQ   N  +A+      +  D      Y  RG  L   G++ KAI+D 
Sbjct: 185 ENAQAFHARGLIYQREGNQPQAITDFDNAIDRDPFAGAPYLARGQSLIATGKYDKAIEDF 244

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           ++ L +D  N +        Y   G   +A + Y  AL  +
Sbjct: 245 NAALHVDNKNPDAWAGLGLAYEKSGNRTKAAESYQRALTFD 285



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/157 (26%), Positives = 75/157 (47%)

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           + N   ++ +A +  LS  V  +  +  AY   G+A + +G+Y +A     +AI+LD N 
Sbjct: 59  VANQSPQEASANLASLSDVVSRNPRSSEAYDTRGVAYAKLGKYSEAISDFSQAIKLDPNN 118

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +    Y+    ++ AL    + + ++ R + AY  R  LL   G   +A  DL  
Sbjct: 119 APAYTNRALAYRQSNRNDAALADFNRAIEVNPRHAPAYLGRANLLRVQGNLDEAKSDLDQ 178

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            + ++P N +  + R   Y   G   +AI D+D A+D
Sbjct: 179 AIKLNPENAQAFHARGLIYQREGNQPQAITDFDNAID 215



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 71/303 (23%), Positives = 117/303 (38%), Gaps = 56/303 (18%)

Query: 266 ASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDK----LSSDSASLND- 320
           A+R  + + R       +  G +     N   G    G  +V ++     S++ ASL+D 
Sbjct: 18  AARAIAHVGRVRFGLIALSAGALAGCGANGISGMHGTGVAEVANQSPQEASANLASLSDV 77

Query: 321 ---SNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
              +  +SE+Y    ++  K    +E+ S  S +   L   +  A  N+     + +++ 
Sbjct: 78  VSRNPRSSEAYDTRGVAYAKLGKYSEAISDFS-QAIKLDPNNAPAYTNRALAYRQSNRND 136

Query: 378 SISVDFR-------------LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
           +   DF              L R      +G    A S  DQ +K +P   +A   RG  
Sbjct: 137 AALADFNRAIEVNPRHAPAYLGRANLLRVQGNLDEAKSDLDQAIKLNPENAQAFHARGLI 196

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
              +     AI+DF  AI  +P AG  +  RGQ+  A G+  +AI+              
Sbjct: 197 YQREGNQPQAITDFDNAIDRDPFAGAPYLARGQSLIATGKYDKAIE-------------- 242

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
                        DFNAA+        +D +N  A+  LGLA    G   KA E++ +A+
Sbjct: 243 -------------DFNAALH-------VDNKNPDAWAGLGLAYEKSGNRTKAAESYQRAL 282

Query: 545 QLD 547
             D
Sbjct: 283 TFD 285


>gi|390441644|ref|ZP_10229686.1| Mom72 protein [Microcystis sp. T1-4]
 gi|389835062|emb|CCI33812.1| Mom72 protein [Microcystis sp. T1-4]
          Length = 260

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 96/207 (46%), Gaps = 10/207 (4%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLSAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++ L   PN  + L  R    +  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQTLTINPNYVNALGNRCYAYYLTKKYEAAVEDCTKAITLNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           G + +A E + KA+ L      DR F     +    Y      E AL    + L I+  F
Sbjct: 150 GRHAEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYDESLKINANF 205

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           ++AYH RGL  + LG  +KAI DL + 
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLEAA 232



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 5/243 (2%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  +    +NP     +  RG  R + G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 20  ISPLSSQTTANPVKAVEFYNRGVDRLSAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A      A     +Y+ A E   KAI L+ NF + +
Sbjct: 80  VLGQYERAIADYTQTLTINPNYVNALGNRCYAYYLTKKYEAAVEDCTKAITLNGNFADFF 139

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   + ++ R L  +  GQ + A++D    L
Sbjct: 140 IYRGNAKDDLGRHAEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYDESL 199

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYT 672
            I+ +  E  + R   ++ +G   +AI D +AA  L L   ++      A  Q  +AL  
Sbjct: 200 KINANFAEAYHNRGLTHYKLGNREKAIADLEAAARLALSQGKQ---GTAAKSQSAVALIQ 256

Query: 673 ASK 675
           A K
Sbjct: 257 AQK 259



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 2/192 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +++ G Y+ AI+ F Q L+ +P   +A   RG A     + E AI+D+T+ +  N
Sbjct: 39  NRGVDRLSAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQTLTIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   R  A     +   A++D +KA+    N AD    RG           A+ED
Sbjct: 99  PNYVNALGNRCYAYYLTKKYEAAVEDCTKAITLNGNFADFFIYRGNAKDDLGRHAEAIED 158

Query: 506 LSACVKLD--KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +  + L   +     +    LA +  G+ + A   + ++++++ NF EA+ +    +  
Sbjct: 159 YTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYDESLKINANFAEAYHNRGLTHYK 218

Query: 564 LANSEKALECLQ 575
           L N EKA+  L+
Sbjct: 219 LGNREKAIADLE 230



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A++  G+Y  AI+ + Q L  +P Y  AL  R  A    ++ EAA+ D T+A
Sbjct: 69  DAYYNRGYAELVLGQYERAIADYTQTLTINPNYVNALGNRCYAYYLTKKYEAAVEDCTKA 128

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG   EAI+D +KAL  +       I + R +   +    
Sbjct: 129 ITLNGNFADFFIYRGNAKDDLGRHAEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D    +K++     AY   GL    +G  +KA
Sbjct: 189 EMALRDYDESLKINANFAEAYHNRGLTHYKLGNREKA 225



 Score = 43.1 bits (100), Expect = 0.80,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + G++A AI  + + L       +  I    A A+ R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGRHAEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYD 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL  A
Sbjct: 197 ESLKINANFAEAYHNRGLTHYKLGNREKAIADLEAA 232


>gi|443329767|ref|YP_007378838.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428682393|gb|AFZ61157.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 227

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 47/151 (31%), Positives = 83/151 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+ ++ +G +  AI  F Q++K +P Y E    RG A++   + +AA+ DF + +Q N
Sbjct: 45  NQGVQKLEQGNFNGAIEDFSQVVKLNPRYYEGFCLRGLAKSQLGDFQAAVIDFNQVLQLN 104

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            S  + +  RG A A LG    AI D ++ L+ +P S D  + RG +N++  +   A+ D
Sbjct: 105 SSHTDGYNGRGMAHAELGNLQAAITDFNQVLKIDPQSVDAYYNRGFLNYRQGNHQMAISD 164

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
            +  +K++     AY   GLA  ++G+ K A
Sbjct: 165 FNQSLKINPNLADAYGNRGLAKYALGDRKSA 195



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/162 (29%), Positives = 81/162 (50%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + +G+   +  +FN A+ED S  VKL+      +   GLA S +G+++ A     + +QL
Sbjct: 44  YNQGVQKLEQGNFNGAIEDFSQVVKLNPRYYEGFCLRGLAKSQLGDFQAAVIDFNQVLQL 103

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           + +  + +      + +L N + A+    QVL ID +   AY+ RG L +  G H+ AI 
Sbjct: 104 NSSHTDGYNGRGMAHAELGNLQAAITDFNQVLKIDPQSVDAYYNRGFLNYRQGNHQMAIS 163

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           D +  L I+P+  +    R    +A+G+ + AI D   A  L
Sbjct: 164 DFNQSLKINPNLADAYGNRGLAKYALGDRKSAITDLQQAASL 205



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 70/136 (51%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+   G + +A+  F+Q+L+ +  + +   GRG A A    L+AAI+DF + ++ +P
Sbjct: 80  RGLAKSQLGDFQAAVIDFNQVLQLNSSHTDGYNGRGMAHAELGNLQAAITDFNQVLKIDP 139

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            + +A+  RG      G    AI D +++L+  PN AD    RG+  +   D  +A+ DL
Sbjct: 140 QSVDAYYNRGFLNYRQGNHQMAISDFNQSLKINPNLADAYGNRGLAKYALGDRKSAITDL 199

Query: 507 SACVKLDKENKSAYTY 522
                L ++      Y
Sbjct: 200 QQAASLFQQQGDIQRY 215



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 34/188 (18%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G  +  Q     AI DF++ ++ NP   E +  RG A++ LG+   A+ D ++ L+   
Sbjct: 46  QGVQKLEQGNFNGAIEDFSQVVKLNPRYYEGFCLRGLAKSQLGDFQAAVIDFNQVLQLNS 105

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           +  D  + RG+ + +  +  AA+ D +  +K+D ++  AY                    
Sbjct: 106 SHTDGYNGRGMAHAELGNLQAAITDFNQVLKIDPQSVDAY-------------------- 145

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
                 +R FL         Y+   N + A+    Q L I+   + AY  RGL  + LG 
Sbjct: 146 -----YNRGFLN--------YRQ-GNHQMAISDFNQSLKINPNLADAYGNRGLAKYALGD 191

Query: 601 HKKAIKDL 608
            K AI DL
Sbjct: 192 RKSAITDL 199


>gi|440703720|ref|ZP_20884640.1| tetratricopeptide repeat protein [Streptomyces turgidiscabies Car8]
 gi|440274727|gb|ELP63235.1| tetratricopeptide repeat protein [Streptomyces turgidiscabies Car8]
          Length = 747

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 121/288 (42%), Gaps = 5/288 (1%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R+ RG      G Y  A+  ++Q L  DP    A  GRG  RA QR+  AAI+D   A +
Sbjct: 192 RMLRGRELRLSGAYERALGEYEQALALDPELERAYYGRGVTRAEQRDYAAAITDLDRADE 251

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
             P        RG     LG   EA++DL +A+   P+ A     RG+      D   A+
Sbjct: 252 LAPDTARVLFVRGDYHRILGHHEEAVRDLDRAVALGPDLAGAWASRGVTRHGTGDIEQAL 311

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            DL   ++LD E+  A         S  E+ +      +A+ L               + 
Sbjct: 312 ADLDRALELDPEHVWALVRRARVHRSREEHDRQFADLDRAVALGPELAWVSCQRGDALRV 371

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
                +AL    + L +D  ++ AY  RG+    LG+H+  + DL   L + P+    L 
Sbjct: 372 AGRDTEALADYDRALELDPAYASAYASRGVSRSRLGRHEGGLADLDRALALHPAYPWALV 431

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQK 666
            R+  +    EY  + +D D A++LE +S          L+CL  +++
Sbjct: 432 QRSVVHRKTDEYEASYEDADRAVELEPESAWALWNRGEALRCLGRFEE 479



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 128/321 (39%), Gaps = 37/321 (11%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RG+ +  +  YA+AI+  D+  +  P     L  RG         E A+ D   A+   
Sbjct: 228 GRGVTRAEQRDYAAAITDLDRADELAPDTARVLFVRGDYHRILGHHEEAVRDLDRAVALG 287

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-------NFKFKD 498
           P    AW  RG  R   G+  +A+ DL +ALE +P     L  R  V       + +F D
Sbjct: 288 PDLAGAWASRGVTRHGTGDIEQALADLDRALELDPEHVWALVRRARVHRSREEHDRQFAD 347

Query: 499 FNAAVE---------------------------DLSACVKLDKENKSAYTYLGLALSSIG 531
            + AV                            D    ++LD    SAY   G++ S +G
Sbjct: 348 LDRAVALGPELAWVSCQRGDALRVAGRDTEALADYDRALELDPAYASAYASRGVSRSRLG 407

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
            ++       +A+ L   +  A    +  ++     E + E   + + ++   + A   R
Sbjct: 408 RHEGGLADLDRALALHPAYPWALVQRSVVHRKTDEYEASYEDADRAVELEPESAWALWNR 467

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G  L  LG+ ++A  DL   L + P ++  +  R +  H +  Y EA+ D D A+ L+ D
Sbjct: 468 GEALRCLGRFEEARVDLDRALSLFPGSVWAVGCRGAVLHELRLYGEALDDLDRAVTLDPD 527

Query: 652 S---MEKFVLQCLAFYQKEIA 669
               + + ++  LA  + E A
Sbjct: 528 GAWHLMRRIMTLLAVGRPEDA 548



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 107/268 (39%), Gaps = 20/268 (7%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+ +   G    A++  D+ L+ DP +  AL+ R      + E +   +D   A+   
Sbjct: 296 SRGVTRHGTGDIEQALADLDRALELDPEHVWALVRRARVHRSREEHDRQFADLDRAVALG 355

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P       +RG A    G   EA+ D  +ALE +P  A     RG+   +       + D
Sbjct: 356 PELAWVSCQRGDALRVAGRDTEALADYDRALELDPAYASAYASRGVSRSRLGRHEGGLAD 415

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L   + L      A     +      EY+ + E   +A++L+     AW         L 
Sbjct: 416 LDRALALHPAYPWALVQRSVVHRKTDEYEASYEDADRAVELEPE--SAWA--------LW 465

Query: 566 NSEKALECLQQV----LYIDKRFSK------AYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           N  +AL CL +     + +D+  S       A   RG +LH L  + +A+ DL   + +D
Sbjct: 466 NRGEALRCLGRFEEARVDLDRALSLFPGSVWAVGCRGAVLHELRLYGEALDDLDRAVTLD 525

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYD 643
           P     L  R     A+G   +A  D D
Sbjct: 526 PDGAWHLMRRIMTLLAVGRPEDARTDLD 553


>gi|425456550|ref|ZP_18836258.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9807]
 gi|389802328|emb|CCI18610.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9807]
          Length = 707

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 131/264 (49%), Gaps = 3/264 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEAAISDFTEAIQSNP-SAGEAWK 453
           +Y  A++ +DQ LK +P Y EA  G+  A  A QR  EA I  + +AIQ NP SA  AW 
Sbjct: 347 RYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALII-YEKAIQINPDSAWPAWL 405

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RGQA   LG++ EA++   + L   P ++     +  +  + + ++AA + L   +   
Sbjct: 406 GRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
           + +   +   G +L ++ +Y+ A +A+ +A+ ++ +    W         L    +ALE 
Sbjct: 466 QNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINEALES 525

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             +    + +FS+A++ +G++L  LG+  +A++  +     + +  +    + +  H + 
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATKANSNYYQAWLHQGALLHQME 585

Query: 634 EYREAIKDYDAALDLELDSMEKFV 657
            ++EAI  Y+ A  L     E F+
Sbjct: 586 RFQEAIASYEKARRLSSQKAEVFI 609



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 7/263 (2%)

Query: 396 KYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +Y+ A+ I+++ ++ +P   +P A +GRG A     + + A+  F   +  NP+A +AW+
Sbjct: 381 RYSEALIIYEKAIQINPDSAWP-AWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQ 439

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            +      L +   A + L K L F+ N A   +++G      +D+  AV+     + ++
Sbjct: 440 GKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIE 499

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKAL 571
            +N   +   G +L  + +  +A E++ KA Q +  F +A  H +Q    Q L    +AL
Sbjct: 500 SDNALIWYQKGNSLYQLNKINEALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKPEAL 557

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           E   Q    +  + +A+  +G LLH + + ++AI        +     E      + ++ 
Sbjct: 558 EAFTQATKANSNYYQAWLHQGALLHQMERFQEAIASYEKARRLSSQKAEVFIGIGNAWYR 617

Query: 632 IGEYREAIKDYDAALDLELDSME 654
           +G+  +AI  Y  A+  + D+ E
Sbjct: 618 LGDNYQAINAYQQAIQRQKDNPE 640



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 8/210 (3%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +++G   ++ K +  A+      +K++ +   A+     AL ++  Y +A   + KAIQ+
Sbjct: 336 YQQGQTFYQLKRYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALIIYEKAIQI 395

Query: 547 DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           + +    AW    Q    L  +++ALE  ++VL ++   S+A+  +  +   L Q+  A 
Sbjct: 396 NPDSAWPAWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQ 455

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           K L   L    ++ +  Y +      + +Y  A+K YD AL +E D+        L +YQ
Sbjct: 456 KALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDN-------ALIWYQ 508

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           K  +LY  +KIN     +   G  +P F +
Sbjct: 509 KGNSLYQLNKINEALESYSKAGQFNPQFSQ 538



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/262 (20%), Positives = 108/262 (41%), Gaps = 34/262 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A    GK   A+  F+++L  +P   +A  G+       ++  AA     + +  
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             +  + W ++G +   L +   A++   +AL  E ++A I +++G   ++    N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINEALE 524

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------L 557
             S   + + +   A+   G+ L  +G   +A EA  +A + + N+ +AW H       +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATKANSNYYQAWLHQGALLHQM 584

Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
            +F + +A+ EKA                           +   QQ +   K   + +  
Sbjct: 585 ERFQEAIASYEKARRLSSQKAEVFIGIGNAWYRLGDNYQAINAYQQAIQRQKDNPETWKS 644

Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
            G     LGQ+++AI+     L
Sbjct: 645 LGNSWFKLGQYERAIQAYQESL 666



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 2/140 (1%)

Query: 411 DPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
           +P + +A   +G   +   R+ EA +  FT+A ++N +  +AW  +G     +    EAI
Sbjct: 533 NPQFSQAHYSQGIILQKLGRKPEA-LEAFTQATKANSNYYQAWLHQGALLHQMERFQEAI 591

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
               KA       A++    G   ++  D   A+      ++  K+N   +  LG +   
Sbjct: 592 ASYEKARRLSSQKAEVFIGIGNAWYRLGDNYQAINAYQQAIQRQKDNPETWKSLGNSWFK 651

Query: 530 IGEYKKAEEAHLKAIQLDRN 549
           +G+Y++A +A+ ++++   N
Sbjct: 652 LGQYERAIQAYQESLRYRSN 671



 Score = 40.8 bits (94), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 90/200 (45%), Gaps = 10/200 (5%)

Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
           LN  N   ESYSK+   + + S +  S+  +      L++   + +  + F  T+ +K+ 
Sbjct: 516 LNKINEALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKPEALEAF--TQATKAN 567

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S      L +G       ++  AI+ +++  +      E  IG G A     +   AI+ 
Sbjct: 568 SNYYQAWLHQGALLHQMERFQEAIASYEKARRLSSQKAEVFIGIGNAWYRLGDNYQAINA 627

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +AIQ      E WK  G +   LG+   AIQ   ++L +  N  ++  ++ +   +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDREVQAQKQLAETRWQ 687

Query: 498 DFNAAVEDLSACVKLDKENK 517
           +   ++++ +   K+D E +
Sbjct: 688 ELQQSLQNQTP--KVDNEEQ 705


>gi|75907401|ref|YP_321697.1| hypothetical protein Ava_1178 [Anabaena variabilis ATCC 29413]
 gi|75701126|gb|ABA20802.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 280

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 72/234 (30%), Positives = 120/234 (51%), Gaps = 9/234 (3%)

Query: 358 TSNEAKRNKKFCVTRI--------SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
           TS     NK+  VT I        + + S +  F + +G  Q  +G    AI+ +D+ + 
Sbjct: 29  TSVSCSNNKEVLVTEIGVNPPSRRTTNNSQAGQFYV-QGQRQHAQGDSQGAIASYDKAIG 87

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
            DP Y  A  GRG A     + + AI+D+ EAI+ +P+  EA+  RG ARA+LG++  AI
Sbjct: 88  LDPDYGAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAI 147

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
            D ++A+   PN A+  + RG       D + ++ED +  ++L+ +   AY   G A +S
Sbjct: 148 TDYNEAIRLSPNYAEAYNNRGNARSVQGDKSGSIEDFNQAIRLNPKYAIAYNNRGNARAS 207

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
            G+ + A   + +AI+L+ NF  A+ +         + + ALE LQ+   I +R
Sbjct: 208 QGDSQGAISDYNQAIRLNSNFGPAYNNRGNARAAQGDKQGALEDLQKAADIFQR 261



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 51/194 (26%), Positives = 90/194 (46%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G  +  Q + + AI+ + +AI  +P  G A++ RG A   LG+  +AI D ++A+   P
Sbjct: 65  QGQRQHAQGDSQGAIASYDKAIGLDPDYGAAYRGRGLAYFDLGDKQKAIADYNEAIRLSP 124

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A+  + RG       D   A+ D +  ++L      AY   G A S  G+   + E  
Sbjct: 125 NDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYAEAYNNRGNARSVQGDKSGSIEDF 184

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI+L+  +  A+ +         +S+ A+    Q + ++  F  AY+ RG      G 
Sbjct: 185 NQAIRLNPKYAIAYNNRGNARASQGDSQGAISDYNQAIRLNSNFGPAYNNRGNARAAQGD 244

Query: 601 HKKAIKDLSSGLGI 614
            + A++DL     I
Sbjct: 245 KQGALEDLQKAADI 258



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/217 (23%), Positives = 100/217 (46%), Gaps = 1/217 (0%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E  ++  +    +N  AG+ + + GQ + A G+S  AI    KA+  +P+       RG+
Sbjct: 43  EIGVNPPSRRTTNNSQAGQFYVQ-GQRQHAQGDSQGAIASYDKAIGLDPDYGAAYRGRGL 101

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             F   D   A+ D +  ++L   +  A+   G A +S+G+   A   + +AI+L  N+ 
Sbjct: 102 AYFDLGDKQKAIADYNEAIRLSPNDAEAFNSRGNARASLGDNAGAITDYNEAIRLSPNYA 161

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           EA+ +         +   ++E   Q + ++ +++ AY+ RG      G  + AI D +  
Sbjct: 162 EAYNNRGNARSVQGDKSGSIEDFNQAIRLNPKYAIAYNNRGNARASQGDSQGAISDYNQA 221

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + ++ +       R +   A G+ + A++D   A D+
Sbjct: 222 IRLNSNFGPAYNNRGNARAAQGDKQGALEDLQKAADI 258



 Score = 45.4 bits (106), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 46/92 (50%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            +S+ A+    + + +D  +  AY  RGL    LG  +KAI D +  + + P++ E    
Sbjct: 73  GDSQGAIASYDKAIGLDPDYGAAYRGRGLAYFDLGDKQKAIADYNEAIRLSPNDAEAFNS 132

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           R +   ++G+   AI DY+ A+ L  +  E +
Sbjct: 133 RGNARASLGDNAGAITDYNEAIRLSPNYAEAY 164


>gi|186684314|ref|YP_001867510.1| hypothetical protein Npun_R4192 [Nostoc punctiforme PCC 73102]
 gi|186466766|gb|ACC82567.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
           73102]
          Length = 269

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 116/237 (48%), Gaps = 9/237 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S G    N G Y  AI  + Q + ++     + + RG AR+  ++ + AI DF E I+ +
Sbjct: 12  SLGYILYNSGDYQGAIENYTQAILQNSEDLTSYLSRGVARSLTKDYQNAIEDFNETIRLS 71

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG ARAA+G++  AI+D ++A++ +P        RG   F   ++  A+ED
Sbjct: 72  PQYAQAYAERGVARAAIGDNQSAIEDCNRAIQLDPQYVRAYFGRGAACFYSGNYQGALED 131

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S    +++   S Y  LG+   S G   +A +   KA+ +D N + A+        +L 
Sbjct: 132 FSLIASMERSAVSYYN-LGILQYSQGINSQAIKHLTKALYVDPNLIAAYYVRGNACYELG 190

Query: 566 NSEKALECLQQVLYID-----KRFSK---AYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           + + A     +  +I+     + +S+   A++ RGL  H LG  ++AI D+     I
Sbjct: 191 DEQGAFADFNEAKHIEAVGRGEIYSEDEFAFYARGLASHRLGNREEAIADIQESAQI 247



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 66/247 (26%), Positives = 107/247 (43%), Gaps = 15/247 (6%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + + AI ++T+AI  N     ++  RG AR+   +   AI+D ++ +   P  A    ER
Sbjct: 22  DYQGAIENYTQAILQNSEDLTSYLSRGVARSLTKDYQNAIEDFNETIRLSPQYAQAYAER 81

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+      D  +A+ED +  ++LD +   AY   G A    G Y+ A E       ++R+
Sbjct: 82  GVARAAIGDNQSAIEDCNRAIQLDPQYVRAYFGRGAACFYSGNYQGALEDFSLIASMERS 141

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
            +  +      Y    NS+ A++ L + LY+D     AY++RG   + LG  + A  D +
Sbjct: 142 AVSYYNLGILQYSQGINSQ-AIKHLTKALYVDPNLIAAYYVRGNACYELGDEQGAFADFN 200

Query: 610 SGLGIDP-------SNIE-CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
               I+        S  E   Y R    H +G   EAI D   +  + L        Q  
Sbjct: 201 EAKHIEAVGRGEIYSEDEFAFYARGLASHRLGNREEAIADIQESAQIALKH------QNT 254

Query: 662 AFYQKEI 668
            F+QK I
Sbjct: 255 IFHQKAI 261



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 60/212 (28%), Positives = 109/212 (51%), Gaps = 10/212 (4%)

Query: 463 GESVEAIQDLSKALEFEPNSADILH--ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
           G+   AI++ ++A+    NS D+     RG+     KD+  A+ED +  ++L  +   AY
Sbjct: 21  GDYQGAIENYTQAIL--QNSEDLTSYLSRGVARSLTKDYQNAIEDFNETIRLSPQYAQAY 78

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQDLANSEKALECLQQVL 578
              G+A ++IG+ + A E   +AIQLD  ++ A+       FY    N + ALE    + 
Sbjct: 79  AERGVARAAIGDNQSAIEDCNRAIQLDPQYVRAYFGRGAACFYS--GNYQGALEDFSLIA 136

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            +++     Y+L G+L +  G + +AIK L+  L +DP+ I   Y+R +  + +G+ + A
Sbjct: 137 SMERSAVSYYNL-GILQYSQGINSQAIKHLTKALYVDPNLIAAYYVRGNACYELGDEQGA 195

Query: 639 IKDYDAALDLE-LDSMEKFVLQCLAFYQKEIA 669
             D++ A  +E +   E +     AFY + +A
Sbjct: 196 FADFNEAKHIEAVGRGEIYSEDEFAFYARGLA 227



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 80/154 (51%), Gaps = 14/154 (9%)

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------GHLTQFYQDLANSEKALE 572
            Y+ LG  L + G+Y+ A E + +AI  +   L ++        LT+ YQ+      A+E
Sbjct: 9   GYSSLGYILYNSGDYQGAIENYTQAILQNSEDLTSYLSRGVARSLTKDYQN------AIE 62

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR-ASCYHA 631
              + + +  ++++AY  RG+    +G ++ AI+D +  + +DP  +   + R A+C+++
Sbjct: 63  DFNETIRLSPQYAQAYAERGVARAAIGDNQSAIEDCNRAIQLDPQYVRAYFGRGAACFYS 122

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            G Y+ A++D+     +E  ++  + L  L + Q
Sbjct: 123 -GNYQGALEDFSLIASMERSAVSYYNLGILQYSQ 155


>gi|451819922|ref|YP_007456123.1| TPR repeat-containing protein [Clostridium
           saccharoperbutylacetonicum N1-4(HMT)]
 gi|451785901|gb|AGF56869.1| TPR repeat-containing protein [Clostridium
           saccharoperbutylacetonicum N1-4(HMT)]
          Length = 759

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 113/218 (51%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+     G+   AI  +++ ++  P Y E    +G       + E AI  + +AI+ NP
Sbjct: 526 KGLTLRKSGQNEEAIECYNKAIELKPDYAEVYNNKGNILQDLGQNEEAIECYDKAIELNP 585

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  +G A   LG++ EAI+   KA E  P+  +  + +G           A+   
Sbjct: 586 DYVKAYNNKGSALQNLGQNEEAIECYDKAKELSPDYVNAYYNKGTALMNLGQDEEAIGCY 645

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L  +  +AY   G AL ++G+ ++A E + KAI+L  +++ A+ +     Q+L  
Sbjct: 646 DKAIELSPDYVNAYNNKGTALKNLGQNEEAIECYDKAIELSPDYVNAYNNKGNVLQNLGQ 705

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           +E+A+EC  + + ++  ++KAY+ +G  L  LG+++KA
Sbjct: 706 NEEAIECYDKAIELNPDYAKAYYNKGNALKILGKNEKA 743



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 122/256 (47%), Gaps = 2/256 (0%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           F  S+ +   NE  Y   +   ++I+  D    +A   +G       + E AI  + +AI
Sbjct: 490 FNESKRLLDNNE--YTKLLEKSNEIINTDINNAKAYFVKGLTLRKSGQNEEAIECYNKAI 547

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +  P   E +  +G     LG++ EAI+   KA+E  P+     + +G           A
Sbjct: 548 ELKPDYAEVYNNKGNILQDLGQNEEAIECYDKAIELNPDYVKAYNNKGSALQNLGQNEEA 607

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +E      +L  +  +AY   G AL ++G+ ++A   + KAI+L  +++ A+ +     +
Sbjct: 608 IECYDKAKELSPDYVNAYYNKGTALMNLGQDEEAIGCYDKAIELSPDYVNAYNNKGTALK 667

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +L  +E+A+EC  + + +   +  AY+ +G +L  LGQ+++AI+     + ++P   +  
Sbjct: 668 NLGQNEEAIECYDKAIELSPDYVNAYNNKGNVLQNLGQNEEAIECYDKAIELNPDYAKAY 727

Query: 623 YLRASCYHAIGEYREA 638
           Y + +    +G+  +A
Sbjct: 728 YNKGNALKILGKNEKA 743



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 117/232 (50%), Gaps = 7/232 (3%)

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
            E I ++ +  +A+  +G      G++ EAI+  +KA+E +P+ A++ + +G +      
Sbjct: 510 NEIINTDINNAKAYFVKGLTLRKSGQNEEAIECYNKAIELKPDYAEVYNNKGNILQDLGQ 569

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
              A+E     ++L+ +   AY   G AL ++G+ ++A E + KA +L  +++ A+ +  
Sbjct: 570 NEEAIECYDKAIELNPDYVKAYNNKGSALQNLGQNEEAIECYDKAKELSPDYVNAYYNKG 629

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
               +L   E+A+ C  + + +   +  AY+ +G  L  LGQ+++AI+     + + P  
Sbjct: 630 TALMNLGQDEEAIGCYDKAIELSPDYVNAYNNKGTALKNLGQNEEAIECYDKAIELSPDY 689

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
           +     + +    +G+  EAI+ YD A++L  D  +       A+Y K  AL
Sbjct: 690 VNAYNNKGNVLQNLGQNEEAIECYDKAIELNPDYAK-------AYYNKGNAL 734



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 82/159 (51%)

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           ++   +E  +  +  D  N  AY   GL L   G+ ++A E + KAI+L  ++ E + + 
Sbjct: 501 EYTKLLEKSNEIINTDINNAKAYFVKGLTLRKSGQNEEAIECYNKAIELKPDYAEVYNNK 560

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
               QDL  +E+A+EC  + + ++  + KAY+ +G  L  LGQ+++AI+       + P 
Sbjct: 561 GNILQDLGQNEEAIECYDKAIELNPDYVKAYNNKGSALQNLGQNEEAIECYDKAKELSPD 620

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            +   Y + +    +G+  EAI  YD A++L  D +  +
Sbjct: 621 YVNAYYNKGTALMNLGQDEEAIGCYDKAIELSPDYVNAY 659


>gi|434387104|ref|YP_007097715.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
 gi|428018094|gb|AFY94188.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
          Length = 267

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 34/265 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L  G   +  G +A AI+ +D I++ DP    A  GRG A A   +   AI  F  A+  
Sbjct: 4   LDTGDRLLGAGNFAEAIACYDLIIEIDPFQHHAWYGRGLALARSAKYREAIESFDCALNI 63

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P+   AW  RG A   LGE  +A+     AL+    +++ L+ R               
Sbjct: 64  QPNEEMAWINRGTAFGILGEFTQALASFDLALKINAYNSEALYGR--------------- 108

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                              GLAL+ +G   ++  ++ +A+++D +  +AW +      +L
Sbjct: 109 -------------------GLALNQLGRNTESLASYERAVKIDSDNYKAWHNRGVLLNEL 149

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              + A++C  + L ++    +A+  R L L  L ++ +AI +    L ++P+N E  Y 
Sbjct: 150 TRYQDAIDCFDRALAVNPDLYQAWQSRTLSLLNLERYAEAIINCDRLLALEPNNPEAFYQ 209

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           R      +  Y EAI D+D AL ++
Sbjct: 210 RGIALSMLTRYDEAIIDFDLALQID 234



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 86/220 (39%), Gaps = 34/220 (15%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RG+A     KY  AI  FD  L   P    A I RGTA     E   A++ F  A++ N
Sbjct: 39  GRGLALARSAKYREAIESFDCALNIQPNEEMAWINRGTAFGILGEFTQALASFDLALKIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV-- 503
               EA   RG A   LG + E++    +A++ + ++    H RG++  +   +  A+  
Sbjct: 99  AYNSEALYGRGLALNQLGRNTESLASYERAVKIDSDNYKAWHNRGVLLNELTRYQDAIDC 158

Query: 504 -----------------------------EDLSAC---VKLDKENKSAYTYLGLALSSIG 531
                                        E +  C   + L+  N  A+   G+ALS + 
Sbjct: 159 FDRALAVNPDLYQAWQSRTLSLLNLERYAEAIINCDRLLALEPNNPEAFYQRGIALSMLT 218

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
            Y +A      A+Q+D  +  AW +       LA   +AL
Sbjct: 219 RYDEAIIDFDLALQIDSGYYLAWKNRGYALDRLARHSEAL 258



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 27/230 (11%)

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           +F  A+      +++D     A+   GLAL+   +Y++A E+   A+ +  N   AW + 
Sbjct: 15  NFAEAIACYDLIIEIDPFQHHAWYGRGLALARSAKYREAIESFDCALNIQPNEEMAWINR 74

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              +  L    +AL      L I+   S+A + RGL L+ LG++ +++      + ID  
Sbjct: 75  GTAFGILGEFTQALASFDLALKINAYNSEALYGRGLALNQLGRNTESLASYERAVKIDSD 134

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAAL-------------DLELDSMEKF---VLQC- 660
           N +  + R    + +  Y++AI  +D AL              L L ++E++   ++ C 
Sbjct: 135 NYKAWHNRGVLLNELTRYQDAIDCFDRALAVNPDLYQAWQSRTLSLLNLERYAEAIINCD 194

Query: 661 ----------LAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                      AFYQ+ IAL   ++ +     FD+   ID  +   W  R
Sbjct: 195 RLLALEPNNPEAFYQRGIALSMLTRYDEAIIDFDLALQIDSGYYLAWKNR 244



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 34/186 (18%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-----------RAFQRELEA 433
           ++RG A    G++  A++ FD  LK +    EAL GRG A            +++R ++ 
Sbjct: 72  INRGTAFGILGEFTQALASFDLALKINAYNSEALYGRGLALNQLGRNTESLASYERAVKI 131

Query: 434 -----------------------AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
                                  AI  F  A+  NP   +AW+ R  +   L    EAI 
Sbjct: 132 DSDNYKAWHNRGVLLNELTRYQDAIDCFDRALAVNPDLYQAWQSRTLSLLNLERYAEAII 191

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           +  + L  EPN+ +  ++RGI       ++ A+ D    +++D     A+   G AL  +
Sbjct: 192 NCDRLLALEPNNPEAFYQRGIALSMLTRYDEAIIDFDLALQIDSGYYLAWKNRGYALDRL 251

Query: 531 GEYKKA 536
             + +A
Sbjct: 252 ARHSEA 257


>gi|166365168|ref|YP_001657441.1| hypothetical protein MAE_24270 [Microcystis aeruginosa NIES-843]
 gi|425465366|ref|ZP_18844675.1| Periplasmic protein [Microcystis aeruginosa PCC 9809]
 gi|166087541|dbj|BAG02249.1| periplasmic protein [Microcystis aeruginosa NIES-843]
 gi|389832406|emb|CCI24007.1| Periplasmic protein [Microcystis aeruginosa PCC 9809]
          Length = 260

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 12/205 (5%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL    N  + L  R  V++  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQALTINSNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQL------DRNFL-EAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G + +A E + KA+ L      DR F   A  H           E AL    + L I+  
Sbjct: 150 GRHLEAIEDYTKALSLQGTRGQDRIFYNRALAH-----NRAGQQEMALRDYNESLKINAN 204

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDL 608
           F++AYH RGL  + LG  +KAI DL
Sbjct: 205 FAEAYHNRGLTYYKLGNREKAIADL 229



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 97/199 (48%), Gaps = 2/199 (1%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  LS      P  A   + RG+      D++ A+ D +  ++L+ ++  AY   G A  
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+Y++A   + +A+ ++ N++ A G+    +      E A+E   + + ++  F+  +
Sbjct: 80  VLGQYERAIADYTQALTINSNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREAIKDYDAAL 646
             RG     LG+H +AI+D +  L +  +  +    Y RA  ++  G+   A++DY+ +L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAHNRAGQQEMALRDYNESL 199

Query: 647 DLELDSMEKFVLQCLAFYQ 665
            +  +  E +  + L +Y+
Sbjct: 200 KINANFAEAYHNRGLTYYK 218



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 2/218 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  +    +NP     +  RG  R   G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A            +Y+ A E   KAI L+ NF + +
Sbjct: 80  VLGQYERAIADYTQALTINSNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   + ++ R L  +  GQ + A++D +  L
Sbjct: 140 IYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAHNRAGQQEMALRDYNESL 199

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            I+ +  E  + R   Y+ +G   +AI D + A  L L
Sbjct: 200 KINANFAEAYHNRGLTYYKLGNREKAIADLEEAARLAL 237



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 2/193 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++  G Y+ AI+ F Q L+ +P   +A   RG A     + E AI+D+T+A+  N
Sbjct: 39  NRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQALTIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +   A   R        +   A++D +KA+    N AD    RG           A+ED
Sbjct: 99  SNYVNALGNRCYVHYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGRHLEAIED 158

Query: 506 LSACVKLD--KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +  + L   +     +    LA +  G+ + A   + ++++++ NF EA+ +    Y  
Sbjct: 159 YTKALSLQGTRGQDRIFYNRALAHNRAGQQEMALRDYNESLKINANFAEAYHNRGLTYYK 218

Query: 564 LANSEKALECLQQ 576
           L N EKA+  L++
Sbjct: 219 LGNREKAIADLEE 231



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A++  G+Y  AI+ + Q L  +  Y  AL  R       ++ EAA+ D T+A
Sbjct: 69  DAYYNRGYAELVLGQYERAIADYTQALTINSNYVNALGNRCYVHYLTKKYEAAVEDCTKA 128

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG  +EAI+D +KAL  +       I + R + + +    
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAHNRAGQQ 188

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D +  +K++     AY   GL    +G  +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTYYKLGNREKA 225



 Score = 40.0 bits (92), Expect = 7.6,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + G++  AI  + + L       +  I    A A  R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGRHLEAIEDYTKALSLQGTRGQDRIFYNRALAHNRAGQQEMALRDYN 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL +A
Sbjct: 197 ESLKINANFAEAYHNRGLTYYKLGNREKAIADLEEA 232


>gi|150402041|ref|YP_001329335.1| hypothetical protein MmarC7_0114 [Methanococcus maripaludis C7]
 gi|150033071|gb|ABR65184.1| TPR repeat-containing protein [Methanococcus maripaludis C7]
          Length = 602

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 139/270 (51%), Gaps = 2/270 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A    GKY  AI  FD+ L+ +  Y E+   +G +       E AI  + +A++ +
Sbjct: 236 NKGYAIYELGKYEKAIICFDRSLELNFDYLESNYYKGDSLYELERYEEAIECYDKALEID 295

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     W  +G + + L    EAI+ L KALE +  +    +++G    + + +  A E 
Sbjct: 296 PKNEYIWYSKGCSLSNLERYEEAIECLDKALEIDSKNEKFWNKKGYSLNELERYEEASEC 355

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L   +++D +N+  +   G AL+ +  Y++A   + +A++L+ N+ +A+ +       L 
Sbjct: 356 LDKALEIDSKNEKFWNNKGYALAGLERYEEAITCYDEALELNNNYSKAYKNKGYSLAGLE 415

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+EC  + L ID  ++KA   +G  L  LG++++A++     + +D SN +    +
Sbjct: 416 RYEEAIECYDKALEIDSNYTKAQQNKGNALFELGKYEEALECYDLVIAVDKSNEKAWADK 475

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEK 655
            +    +  Y EAI+ +D A  +ELDS +K
Sbjct: 476 GNALFELERYEEAIECFDKA--IELDSNDK 503



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 146/325 (44%), Gaps = 8/325 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +  G+     G +  +I  FD+ L+ +P   EAL+ +G       E E AI  F +A++ 
Sbjct: 32  IDSGLEYFGNGNFEKSIESFDETLRINPYNMEALVSKGYILYAINESEKAIECFDKALEI 91

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N    + W+ +G A   L    EAI+   K+LE    + ++ + +G   +  + +  A+E
Sbjct: 92  NSDYYDTWQYKGYALHDLERYEEAIECFDKSLEIYEENPEVYYMKGASLYGLERYEEAIE 151

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            L   ++    N    T  G  L  +  Y++A E   KA++   ++L AW         L
Sbjct: 152 CLDIALETYPNNIYMLTDKGNTLYELERYEEAIECFDKALKY-VSYLNAWNDKGNTLCKL 210

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               +A++C  + L ID      +  +G  ++ LG+++KAI      L ++   +E  Y 
Sbjct: 211 ERYSEAVQCYDKALEIDSSSYVLWGNKGYAIYELGKYEKAIICFDRSLELNFDYLESNYY 270

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           +    + +  Y EAI+ YD A  LE+D   +++     +Y K  +L    +        D
Sbjct: 271 KGDSLYELERYEEAIECYDKA--LEIDPKNEYI-----WYSKGCSLSNLERYEEAIECLD 323

Query: 685 IDGDIDPLFKEYWCKRLHPKNVCEK 709
              +ID   +++W K+ +  N  E+
Sbjct: 324 KALEIDSKNEKFWNKKGYSLNELER 348



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 116/249 (46%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C+ +  +  S +  F   +G +     +Y  A    D+ L+ D    +    +G A A  
Sbjct: 321 CLDKALEIDSKNEKFWNKKGYSLNELERYEEASECLDKALEIDSKNEKFWNNKGYALAGL 380

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              E AI+ + EA++ N +  +A+K +G + A L    EAI+   KALE + N       
Sbjct: 381 ERYEEAITCYDEALELNNNYSKAYKNKGYSLAGLERYEEAIECYDKALEIDSNYTKAQQN 440

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G   F+   +  A+E     + +DK N+ A+   G AL  +  Y++A E   KAI+LD 
Sbjct: 441 KGNALFELGKYEEALECYDLVIAVDKSNEKAWADKGNALFELERYEEAIECFDKAIELDS 500

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N  E W +       L   E+++EC  + L +D    + ++ +G +   L  +++A+K  
Sbjct: 501 NDKEIWNNKGDTLYKLERYEESIECYDEALELDSEDEELWNNKGNIFFKLENYEEALKCY 560

Query: 609 SSGLGIDPS 617
              L I+ +
Sbjct: 561 DRALEINTN 569



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 62/254 (24%), Positives = 122/254 (48%), Gaps = 1/254 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI  FD+ LK    Y  A   +G           A+  + +A++ + S+   W  +
Sbjct: 179 RYEEAIECFDKALKY-VSYLNAWNDKGNTLCKLERYSEAVQCYDKALEIDSSSYVLWGNK 237

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G A   LG+  +AI    ++LE   +  +  + +G   ++ + +  A+E     +++D +
Sbjct: 238 GYAIYELGKYEKAIICFDRSLELNFDYLESNYYKGDSLYELERYEEAIECYDKALEIDPK 297

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           N+  +   G +LS++  Y++A E   KA+++D    + W        +L   E+A ECL 
Sbjct: 298 NEYIWYSKGCSLSNLERYEEAIECLDKALEIDSKNEKFWNKKGYSLNELERYEEASECLD 357

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + L ID +  K ++ +G  L GL ++++AI      L ++ +  +    +      +  Y
Sbjct: 358 KALEIDSKNEKFWNNKGYALAGLERYEEAITCYDEALELNNNYSKAYKNKGYSLAGLERY 417

Query: 636 REAIKDYDAALDLE 649
            EAI+ YD AL+++
Sbjct: 418 EEAIECYDKALEID 431



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 127/287 (44%), Gaps = 34/287 (11%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI  +D+ L+ DP        +G + +     E AI    +A++ +    + W ++
Sbjct: 280 RYEEAIECYDKALEIDPKNEYIWYSKGCSLSNLERYEEAIECLDKALEIDSKNEKFWNKK 339

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G +   L    EA + L KALE +  +    + +G      + +  A+      ++L+  
Sbjct: 340 GYSLNELERYEEASECLDKALEIDSKNEKFWNNKGYALAGLERYEEAITCYDEALELNNN 399

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   G +L+ +  Y++A E + KA+++D N+ +A  +      +L   E+ALEC  
Sbjct: 400 YSKAYKNKGYSLAGLERYEEAIECYDKALEIDSNYTKAQQNKGNALFELGKYEEALECYD 459

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN----------------- 618
            V+ +DK   KA+  +G  L  L ++++AI+     + +D ++                 
Sbjct: 460 LVIAVDKSNEKAWADKGNALFELERYEEAIECFDKAIELDSNDKEIWNNKGDTLYKLERY 519

Query: 619 ---IEC----LYL----------RASCYHAIGEYREAIKDYDAALDL 648
              IEC    L L          + + +  +  Y EA+K YD AL++
Sbjct: 520 EESIECYDEALELDSEDEELWNNKGNIFFKLENYEEALKCYDRALEI 566



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 106/219 (48%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C+ +  +  S +  F  ++G A     +Y  AI+ +D+ L+ +  Y +A   +G + A  
Sbjct: 355 CLDKALEIDSKNEKFWNNKGYALAGLERYEEAITCYDEALELNNNYSKAYKNKGYSLAGL 414

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              E AI  + +A++ + +  +A + +G A   LG+  EA++     +  + ++     +
Sbjct: 415 ERYEEAIECYDKALEIDSNYTKAQQNKGNALFELGKYEEALECYDLVIAVDKSNEKAWAD 474

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G   F+ + +  A+E     ++LD  +K  +   G  L  +  Y+++ E + +A++LD 
Sbjct: 475 KGNALFELERYEEAIECFDKAIELDSNDKEIWNNKGDTLYKLERYEESIECYDEALELDS 534

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
              E W +    +  L N E+AL+C  + L I+  F  A
Sbjct: 535 EDEELWNNKGNIFFKLENYEEALKCYDRALEINTNFELA 573



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 34/200 (17%)

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S+ E W   G      G   ++I+   + L   P + + L  +G + +   +   A+E  
Sbjct: 26  SSTEDWIDSGLEYFGNGNFEKSIESFDETLRINPYNMEALVSKGYILYAINESEKAIECF 85

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++++ +    + Y G AL                                   DL  
Sbjct: 86  DKALEINSDYYDTWQYKGYAL----------------------------------HDLER 111

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+EC  + L I +   + Y+++G  L+GL ++++AI+ L   L   P+NI  L  + 
Sbjct: 112 YEEAIECFDKSLEIYEENPEVYYMKGASLYGLERYEEAIECLDIALETYPNNIYMLTDKG 171

Query: 627 SCYHAIGEYREAIKDYDAAL 646
           +  + +  Y EAI+ +D AL
Sbjct: 172 NTLYELERYEEAIECFDKAL 191


>gi|145531132|ref|XP_001451336.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418984|emb|CAK83939.1| unnamed protein product [Paramecium tetraurelia]
          Length = 503

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 97/199 (48%)

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+  RG     +G S  A+QD  KA+  +P   D   +RG + +K  D   AV D +  +
Sbjct: 226 AYFNRGILYNQMGNSENALQDYDKAILIDPKYVDTYFQRGFIYYKKGDIENAVNDYNQIL 285

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           +LD  N  AY   GL    I E +KA     KA+QLD    E +   +  YQ  +  E +
Sbjct: 286 QLDFSNIKAYLQRGLMYLQINEREKAINDLNKAMQLDPQLSENYNLRSFLYQQTSEVENS 345

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
                 V+  D + S  Y++RG +   + + + A+KD+S  + I P N +  +LR   Y+
Sbjct: 346 SNDCPYVIQSDLQASLYYYIRGFIHQVMSKSENALKDISQAIEIYPLNFQAFFLRGVIYN 405

Query: 631 AIGEYREAIKDYDAALDLE 649
            + +  EA +D+  A+ ++
Sbjct: 406 EMCKTEEAFQDFSEAIKID 424



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 121/270 (44%), Gaps = 42/270 (15%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RGI     G   +A+  +D+ +  DP Y +    RG     + ++E A++D+ + +Q 
Sbjct: 228 FNRGILYNQMGNSENALQDYDKAILIDPKYVDTYFQRGFIYYKKGDIENAVNDYNQILQL 287

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           + S  +A+ +RG     + E  +AI DL+KA++ +P  ++  + R  +  +  +   +  
Sbjct: 288 DFSNIKAYLQRGLMYLQINEREKAINDLNKAMQLDPQLSENYNLRSFLYQQTSEVENSSN 347

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++ D +  S Y Y+                        R F+         +Q +
Sbjct: 348 DCPYVIQSDLQ-ASLYYYI------------------------RGFI---------HQVM 373

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
           + SE AL+ + Q + I     +A+ LRG++ + + + ++A +D S  + IDP N +  + 
Sbjct: 374 SKSENALKDISQAIEIYPLNFQAFFLRGVIYNEMCKTEEAFQDFSEAIKIDPKNFQDWFQ 433

Query: 625 RASC--------YHAIGEYREAIKDYDAAL 646
           R           Y  +G +  A+ DYD A+
Sbjct: 434 RGDVVISILGLIYEQMGNFENALNDYDQAI 463



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 16/215 (7%)

Query: 467 EAIQDLSKALEFEPNSADILHERGI--VNFKFK------DFNAAVEDLSACVKLDKENKS 518
           +AIQD  + LE + N A + H  GI  VN   K      D    +E  +  + LD  +  
Sbjct: 124 QAIQDCMQCLEIDKNFALVYHRMGISTVNKLGKIVGSKGDKEKELEYYNIAISLDANSLK 183

Query: 519 AYTYLGLALSSIG-------EYKKAEEAHLKA-IQLDRNFLEAWGHLTQFYQDLANSEKA 570
           A+   G+  S IG       EY+KA   +      LD     A+ +    Y  + NSE A
Sbjct: 184 AFMNRGMVQSKIGILFHNQGEYEKALNDYCYGNTILDSKHPIAYFNRGILYNQMGNSENA 243

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           L+   + + ID ++   Y  RG + +  G  + A+ D +  L +D SNI+    R   Y 
Sbjct: 244 LQDYDKAILIDPKYVDTYFQRGFIYYKKGDIENAVNDYNQILQLDFSNIKAYLQRGLMYL 303

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            I E  +AI D + A+ L+    E + L+   + Q
Sbjct: 304 QINEREKAINDLNKAMQLDPQLSENYNLRSFLYQQ 338



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 18/186 (9%)

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLA--------LSSIGEYKKAEEAHLKAIQLDR 548
           K +  A++D   C+++DK     Y  +G++        + S G+ +K  E +  AI LD 
Sbjct: 120 KLYEQAIQDCMQCLEIDKNFALVYHRMGISTVNKLGKIVGSKGDKEKELEYYNIAISLDA 179

Query: 549 NFLEAWGH-------LTQFYQDLANSEKALE--CLQQVLYIDKRFSKAYHLRGLLLHGLG 599
           N L+A+ +       +   + +    EKAL   C    + +D +   AY  RG+L + +G
Sbjct: 180 NSLKAFMNRGMVQSKIGILFHNQGEYEKALNDYCYGNTI-LDSKHPIAYFNRGILYNQMG 238

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
             + A++D    + IDP  ++  + R   Y+  G+   A+ DY+  L L+  +++ ++ +
Sbjct: 239 NSENALQDYDKAILIDPKYVDTYFQRGFIYYKKGDIENAVNDYNQILQLDFSNIKAYLQR 298

Query: 660 CLAFYQ 665
            L + Q
Sbjct: 299 GLMYLQ 304



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 8/220 (3%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD    RG     +G   +A++ ++QIL+ D    +A + RG       E E AI+D  +
Sbjct: 258 VDTYFQRGFIYYKKGDIENAVNDYNQILQLDFSNIKAYLQRGLMYLQINEREKAINDLNK 317

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+Q +P   E +  R        E   +  D    ++ +  ++   + RG ++       
Sbjct: 318 AMQLDPQLSENYNLRSFLYQQTSEVENSSNDCPYVIQSDLQASLYYYIRGFIHQVMSKSE 377

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH---- 556
            A++D+S  +++   N  A+   G+  + + + ++A +   +AI++D    + W      
Sbjct: 378 NALKDISQAIEIYPLNFQAFFLRGVIYNEMCKTEEAFQDFSEAIKIDPKNFQDWFQRGDV 437

Query: 557 ----LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
               L   Y+ + N E AL    Q + ID + ++ Y  RG
Sbjct: 438 VISILGLIYEQMGNFENALNDYDQAILIDPQDTEVYFRRG 477



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 16/219 (7%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARA-ALGESVEAIQDLSKALEF-------EPNSA 483
           E AI D  + ++ + +    + R G +    LG+ V +  D  K LE+       + NS 
Sbjct: 123 EQAIQDCMQCLEIDKNFALVYHRMGISTVNKLGKIVGSKGDKEKELEYYNIAISLDANSL 182

Query: 484 DILHERGIVNFKFK-------DFNAAVEDL-SACVKLDKENKSAYTYLGLALSSIGEYKK 535
                RG+V  K         ++  A+ D       LD ++  AY   G+  + +G  + 
Sbjct: 183 KAFMNRGMVQSKIGILFHNQGEYEKALNDYCYGNTILDSKHPIAYFNRGILYNQMGNSEN 242

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A + + KAI +D  +++ +      Y    + E A+    Q+L +D    KAY  RGL+ 
Sbjct: 243 ALQDYDKAILIDPKYVDTYFQRGFIYYKKGDIENAVNDYNQILQLDFSNIKAYLQRGLMY 302

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
             + + +KAI DL+  + +DP   E   LR+  Y    E
Sbjct: 303 LQINEREKAINDLNKAMQLDPQLSENYNLRSFLYQQTSE 341


>gi|425444768|ref|ZP_18824811.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9443]
 gi|389735431|emb|CCI01072.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9443]
          Length = 707

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 131/264 (49%), Gaps = 3/264 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEAAISDFTEAIQSNP-SAGEAWK 453
           +Y  A++ +DQ LK +P Y EA  G+  A  A QR  EA I  + +AIQ NP SA  AW 
Sbjct: 347 RYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALII-YEKAIQINPDSAWPAWL 405

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RGQA   LG++ EA++   + L   P ++     +  +  + + ++AA + L   +   
Sbjct: 406 GRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
           + +   +   G +L ++ +Y+ A +A+ +A+ ++ +    W      +  L    +ALE 
Sbjct: 466 QNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSWYQLNKINEALES 525

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             +    + +FS+A++ +G++L  LG+  +A++  +     + +  +    +    H + 
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATKANSNYYQAWLNQGILLHQME 585

Query: 634 EYREAIKDYDAALDLELDSMEKFV 657
            ++EAI  Y+ A  +     E F+
Sbjct: 586 RFKEAIASYEKARRISSQKAEVFI 609



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 124/263 (47%), Gaps = 7/263 (2%)

Query: 396 KYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +Y+ A+ I+++ ++ +P   +P A +GRG A     + + A+  F   +  NP+A +AW+
Sbjct: 381 RYSEALIIYEKAIQINPDSAWP-AWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQ 439

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            +      L +   A + L K L F+ N A   +++G      +D+  AV+     + ++
Sbjct: 440 GKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIE 499

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKAL 571
            +N   +   G +   + +  +A E++ KA Q +  F +A  H +Q    Q L    +AL
Sbjct: 500 SDNALIWYQKGNSWYQLNKINEALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKPEAL 557

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           E   Q    +  + +A+  +G+LLH + + K+AI        I     E      + ++ 
Sbjct: 558 EAFTQATKANSNYYQAWLNQGILLHQMERFKEAIASYEKARRISSQKAEVFIGIGNAWYR 617

Query: 632 IGEYREAIKDYDAALDLELDSME 654
           +G+  +AI  Y  A+  + D+ E
Sbjct: 618 LGDNYQAINAYQQAIQRQKDNPE 640



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 8/210 (3%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +++G   ++ K +  A+      +K++ +   A+     AL ++  Y +A   + KAIQ+
Sbjct: 336 YQQGQTFYQLKRYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALIIYEKAIQI 395

Query: 547 DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           + +    AW    Q    L  +++ALE  ++VL ++   S+A+  +  +   L Q+  A 
Sbjct: 396 NPDSAWPAWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQ 455

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           K L   L    ++ +  Y +      + +Y  A+K YD AL +E D+        L +YQ
Sbjct: 456 KALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDN-------ALIWYQ 508

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           K  + Y  +KIN     +   G  +P F +
Sbjct: 509 KGNSWYQLNKINEALESYSKAGQFNPQFSQ 538



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 54/262 (20%), Positives = 107/262 (40%), Gaps = 34/262 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A    GK   A+  F+++L  +P   +A  G+       ++  AA     + +  
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             +  + W ++G +   L +   A++   +AL  E ++A I +++G   ++    N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSWYQLNKINEALE 524

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
             S   + + +   A+   G+ L  +G   +A EA  +A + + N+ +AW         +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRKPEALEAFTQATKANSNYYQAWLNQGILLHQM 584

Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
            +F + +A+ EKA                           +   QQ +   K   + +  
Sbjct: 585 ERFKEAIASYEKARRISSQKAEVFIGIGNAWYRLGDNYQAINAYQQAIQRQKDNPETWKS 644

Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
            G     LGQ+++AI+     L
Sbjct: 645 LGNSWFKLGQYERAIQAYQESL 666



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 10/200 (5%)

Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
           LN  N   ESYSK+   + + S +  S+  +      L++   + +  + F  T+ +K+ 
Sbjct: 516 LNKINEALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKPEALEAF--TQATKAN 567

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S      L++GI      ++  AI+ +++  +      E  IG G A     +   AI+ 
Sbjct: 568 SNYYQAWLNQGILLHQMERFKEAIASYEKARRISSQKAEVFIGIGNAWYRLGDNYQAINA 627

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +AIQ      E WK  G +   LG+   AIQ   ++L +  N  ++  ++ +   +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDREVQAQKQLAETRWQ 687

Query: 498 DFNAAVEDLSACVKLDKENK 517
           +   ++++ +   K+D E +
Sbjct: 688 ELQQSLQNQTP--KVDNEEQ 705



 Score = 40.0 bits (92), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 2/140 (1%)

Query: 411 DPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
           +P + +A   +G   +   R+ EA +  FT+A ++N +  +AW  +G     +    EAI
Sbjct: 533 NPQFSQAHYSQGIILQKLGRKPEA-LEAFTQATKANSNYYQAWLNQGILLHQMERFKEAI 591

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
               KA       A++    G   ++  D   A+      ++  K+N   +  LG +   
Sbjct: 592 ASYEKARRISSQKAEVFIGIGNAWYRLGDNYQAINAYQQAIQRQKDNPETWKSLGNSWFK 651

Query: 530 IGEYKKAEEAHLKAIQLDRN 549
           +G+Y++A +A+ ++++   N
Sbjct: 652 LGQYERAIQAYQESLRYRSN 671


>gi|268315734|ref|YP_003289453.1| hypothetical protein Rmar_0157 [Rhodothermus marinus DSM 4252]
 gi|262333268|gb|ACY47065.1| TPR repeat-containing protein [Rhodothermus marinus DSM 4252]
          Length = 465

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 125/267 (46%), Gaps = 7/267 (2%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            E A+      +  +P+A +AW RRG   + LG   EA+Q   +AL   P   + L   G
Sbjct: 54  FEDALGVIDRLLALHPTASDAWMRRGILLSHLGRHEEALQAYERALSLNPTDTETLVNLG 113

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           I       F  A++     +++D  N   Y  LG+ L  +   ++A +A  +A +L+ + 
Sbjct: 114 ITLDNLGRFEEALQAYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPDH 173

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            E W  L   Y  L + E++L C  + L +D   + A++ RG++L+ +G++++A++    
Sbjct: 174 PEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRYREAVESYDY 233

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
            + I        Y R +    +G+ R AI+ Y+  L++E      +    LA+  +E+  
Sbjct: 234 AIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAY--EELQE 291

Query: 671 YTASKINSEFCWFDIDGDIDPLFKEYW 697
           Y  +       +F +  + DP + E W
Sbjct: 292 YETA-----IQYFQLALEEDPAYAEAW 313



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 125/262 (47%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI   N G++  A+  +++ L+ DP+  E     G        LE A+    EA + NP 
Sbjct: 113 GITLDNLGRFEEALQAYERALQIDPLNDEIYYNLGITLERMDRLEEAVQALEEAARLNPD 172

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             E W   G     LG+   ++    + LE +P SAD  + RGIV  +   +  AVE   
Sbjct: 173 HPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAWYNRGIVLNRMGRYREAVESYD 232

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + + ++  SA+   G AL+++G+ + A E++ K ++++      + ++   Y++L   
Sbjct: 233 YAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEIEGGDPATYYNIALAYEELQEY 292

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E A++  Q  L  D  +++A++  G     L + ++AI  +   + + P   E  Y +A 
Sbjct: 293 ETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIACMERAVTLQPETSEFWYAKAD 352

Query: 628 CYHAIGEYREAIKDYDAALDLE 649
           C +     ++A++ Y   ++L+
Sbjct: 353 CEYNARRLQDALQSYRRVIELD 374



 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 170/405 (41%), Gaps = 14/405 (3%)

Query: 346 SKLSFKWDMLKETSNEAKRNKKF-----CVTRISKSKSISVDFRLSRGIAQVNEGKYASA 400
           S   F  D L+E +       +F      + R+      + D  + RGI   + G++  A
Sbjct: 32  SSAYFDSDTLEEIATYYYERGRFEDALGVIDRLLALHPTASDAWMRRGILLSHLGRHEEA 91

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           +  +++ L  +P   E L+  G         E A+  +  A+Q +P   E +   G    
Sbjct: 92  LQAYERALSLNPTDTETLVNLGITLDNLGRFEEALQAYERALQIDPLNDEIYYNLGITLE 151

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +    EA+Q L +A    P+  ++ +E G    +  D   ++      ++LD  +  A+
Sbjct: 152 RMDRLEEAVQALEEAARLNPDHPEVWYELGFCYDRLGDDERSLACYDRHLELDPYSADAW 211

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              G+ L+ +G Y++A E++  AI +  +F  AW +      +L +   A+E  ++VL I
Sbjct: 212 YNRGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAIESYEKVLEI 271

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           +      Y+   L    L +++ AI+     L  DP+  E  Y    CY A+  + EAI 
Sbjct: 272 EGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDALERFEEAIA 331

Query: 641 DYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
             + A+ L+ ++ E        +Y K    Y A ++      +    ++DP  ++ W   
Sbjct: 332 CMERAVTLQPETSE-------FWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWLD- 383

Query: 701 LHPKNVCEKVYRQPPLRDSLKKGKLRRQDFSVTKQKTALLLVADS 745
            + + + E  Y +  L+   +   L     +  +Q  ALL +  S
Sbjct: 384 -YAETLLEAGYVEEALQAYRQALTLNPDARAYIRQARALLALGRS 427



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 48/276 (17%)

Query: 355 LKETSNEAKRNKKFCVTRISKSK----------SISVDFR---LSRGIAQVNEGKYASAI 401
           L   S +A  N+   + R+ + +          +I  DF     +RG A  N G    AI
Sbjct: 203 LDPYSADAWYNRGIVLNRMGRYREAVESYDYAIAIQEDFGSAWYNRGNALTNLGDLRGAI 262

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
             ++++L+ +   P        A    +E E AI  F  A++ +P+  EAW   G    A
Sbjct: 263 ESYEKVLEIEGGDPATYYNIALAYEELQEYETAIQYFQLALEEDPAYAEAWYGLGCCYDA 322

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           L    EAI  + +A+  +P +++  + +    +  +    A++     ++LD +N+ A+ 
Sbjct: 323 LERFEEAIACMERAVTLQPETSEFWYAKADCEYNARRLQDALQSYRRVIELDPQNRDAWL 382

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
                L   G  ++A +A+ +A+ L+ +                                
Sbjct: 383 DYAETLLEAGYVEEALQAYRQALTLNPD-------------------------------- 410

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              ++AY  +   L  LG+ ++ I+ L   L +DPS
Sbjct: 411 ---ARAYIRQARALLALGRSEEGIRSLKMALRLDPS 443


>gi|75910751|ref|YP_325047.1| hypothetical protein Ava_4554 [Anabaena variabilis ATCC 29413]
 gi|75704476|gb|ABA24152.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 547

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 38/262 (14%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+     G Y +AI+ + Q +  +    ++   RG A +     EAAI D+ +AI+ NP
Sbjct: 293 RGLTYYQLGDYEAAIADYSQAINLNFHDAKSYHKRGLALSQLAAYEAAIDDYNQAIRINP 352

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            A   +K R +AR+ LG++  AI+D ++A++  P  AD    RGI  +      A     
Sbjct: 353 HAASIYKNRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRYLL----ATQPGF 408

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +K++  + +AY   G A + IG+Y  A E + +AIQ                     
Sbjct: 409 TQAIKINPNDANAYKNRGNARADIGDYAGAIEDYNQAIQ--------------------- 447

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
                        I+ + + AY+ RG   + LG  + AI D +  + I+PS  +  Y R 
Sbjct: 448 -------------INPKAADAYYNRGNARYDLGDEEGAIADYTQAIQINPSYADAYYNRG 494

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
           +    I + + AI D+  A D+
Sbjct: 495 NVRAGIKDKQGAIADFQKAADI 516



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 115/227 (50%), Gaps = 10/227 (4%)

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
           A GE   +I++ S+AL+   N+ ++ ++RG+  ++  D+ AA+ D S  + L+  +  +Y
Sbjct: 265 AQGEYTASIKNYSQALQASSNNGELYYKRGLTYYQLGDYEAAIADYSQAINLNFHDAKSY 324

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GLALS +  Y+ A + + +AI+++ +    + +  +    L +++ A+E   Q + I
Sbjct: 325 HKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEARSHLGDNQGAIEDYTQAIKI 384

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           + +++  Y  RG+  + L          +  + I+P++      R +    IG+Y  AI+
Sbjct: 385 NPQYADTYKNRGISRYLLATQ----PGFTQAIKINPNDANAYKNRGNARADIGDYAGAIE 440

Query: 641 DYDAALDLELDSMEKFVLQCLAFY-----QKEIALYT-ASKINSEFC 681
           DY+ A+ +   + + +  +  A Y     +  IA YT A +IN  + 
Sbjct: 441 DYNQAIQINPKAADAYYNRGNARYDLGDEEGAIADYTQAIQINPSYA 487



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 4/135 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R  A+ + G    AI  + Q +K +P Y +    RG +R     L A    FT+AI+ N
Sbjct: 360 NRAEARSHLGDNQGAIEDYTQAIKINPQYADTYKNRGISRY----LLATQPGFTQAIKIN 415

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+K RG ARA +G+   AI+D ++A++  P +AD  + RG   +   D   A+ D
Sbjct: 416 PNDANAYKNRGNARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIAD 475

Query: 506 LSACVKLDKENKSAY 520
            +  ++++     AY
Sbjct: 476 YTQAIQINPSYADAY 490



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 93/184 (50%), Gaps = 9/184 (4%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           S++I+++F  +     RG+A      Y +AI  ++Q ++ +P        R  AR+   +
Sbjct: 311 SQAINLNFHDAKSYHKRGLALSQLAAYEAAIDDYNQAIRINPHAASIYKNRAEARSHLGD 370

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI D+T+AI+ NP   + +K RG +R  L          ++A++  PN A+    RG
Sbjct: 371 NQGAIEDYTQAIKINPQYADTYKNRGISRYLLATQ----PGFTQAIKINPNDANAYKNRG 426

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
                  D+  A+ED +  ++++ +   AY   G A   +G+ + A   + +AIQ++ ++
Sbjct: 427 NARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLGDEEGAIADYTQAIQINPSY 486

Query: 551 LEAW 554
            +A+
Sbjct: 487 ADAY 490



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 60/117 (51%), Gaps = 1/117 (0%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           F Q +K +P    A   RG ARA   +   AI D+ +AIQ NP A +A+  RG AR  LG
Sbjct: 408 FTQAIKINPNDANAYKNRGNARADIGDYAGAIEDYNQAIQINPKAADAYYNRGNARYDLG 467

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL-DKENKSA 519
           +   AI D ++A++  P+ AD  + RG V    KD   A+ D      +  KE K A
Sbjct: 468 DEEGAIADYTQAIQINPSYADAYYNRGNVRAGIKDKQGAIADFQKAADIYRKEGKLA 524


>gi|402848922|ref|ZP_10897168.1| putative TPR repeat family protein [Rhodovulum sp. PH10]
 gi|402500798|gb|EJW12464.1| putative TPR repeat family protein [Rhodovulum sp. PH10]
          Length = 269

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 55/201 (27%), Positives = 99/201 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG      G+Y  A++ FD+ +  DP Y +A   RG       ++E A++D+  A++ +P
Sbjct: 50  RGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLVYRQMGQIEPALADYDRALEIDP 109

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S   A   RG    A G+ + A+QD +KA++  P++A   + RG++    + +  A++D 
Sbjct: 110 SYAVAHVGRGMVHRAKGDLLAALQDFNKAIQIRPDNAQAYYNRGLLYQSQRQYQYAIDDF 169

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L ++    Y    L   +IG+ K A +    A+Q++   ++AW      Y+   +
Sbjct: 170 STAIGLSQQQAEPYVARALTYLAIGDTKAAADDLDDAVQMEPENIQAWTSRGLAYERQND 229

Query: 567 SEKALECLQQVLYIDKRFSKA 587
            EKA     + L + K F  A
Sbjct: 230 REKAAGSYAKALALRKDFQPA 250



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 5/182 (2%)

Query: 377 KSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           ++I++D R +     RG+     G+   A++ +D+ L+ DP Y  A +GRG     + +L
Sbjct: 69  RAITLDPRYAQAYANRGLVYRQMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDL 128

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
            AA+ DF +AIQ  P   +A+  RG    +  +   AI D S A+      A+    R +
Sbjct: 129 LAALQDFNKAIQIRPDNAQAYYNRGLLYQSQRQYQYAIDDFSTAIGLSQQQAEPYVARAL 188

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                 D  AA +DL   V+++ EN  A+T  GLA     + +KA  ++ KA+ L ++F 
Sbjct: 189 TYLAIGDTKAAADDLDDAVQMEPENIQAWTSRGLAYERQNDREKAAGSYAKALALRKDFQ 248

Query: 552 EA 553
            A
Sbjct: 249 PA 250



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 76/163 (46%)

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           A +  L+A +  +  +  AY   G  L   G YK+A     +AI LD  + +A+ +    
Sbjct: 28  ANLSSLTAVLAKNPNDPQAYNMRGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLV 87

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y+ +   E AL    + L ID  ++ A+  RG++    G    A++D +  + I P N +
Sbjct: 88  YRQMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDLLAALQDFNKAIQIRPDNAQ 147

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
             Y R   Y +  +Y+ AI D+  A+ L     E +V + L +
Sbjct: 148 AYYNRGLLYQSQRQYQYAIDDFSTAIGLSQQQAEPYVARALTY 190



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 98/214 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           +S    +L ++P  P+A   RG+        + A++DF  AI  +P   +A+  RG    
Sbjct: 30  LSSLTAVLAKNPNDPQAYNMRGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLVYR 89

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G+   A+ D  +ALE +P+ A     RG+V+    D  AA++D +  +++  +N  AY
Sbjct: 90  QMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDLLAALQDFNKAIQIRPDNAQAY 149

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   S  +Y+ A +    AI L +   E +      Y  + +++ A + L   + +
Sbjct: 150 YNRGLLYQSQRQYQYAIDDFSTAIGLSQQQAEPYVARALTYLAIGDTKAAADDLDDAVQM 209

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           +    +A+  RGL        +KA    +  L +
Sbjct: 210 EPENIQAWTSRGLAYERQNDREKAAGSYAKALAL 243



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 52/219 (23%), Positives = 93/219 (42%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           A +S  T  +  NP+  +A+  RG      G   EA+ D  +A+  +P  A     RG+V
Sbjct: 28  ANLSSLTAVLAKNPNDPQAYNMRGSVLGQAGRYKEALADFDRAITLDPRYAQAYANRGLV 87

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             +      A+ D    +++D     A+   G+   + G+   A +   KAIQ+  +  +
Sbjct: 88  YRQMGQIEPALADYDRALEIDPSYAVAHVGRGMVHRAKGDLLAALQDFNKAIQIRPDNAQ 147

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A+ +    YQ     + A++     + + ++ ++ Y  R L    +G  K A  DL   +
Sbjct: 148 AYYNRGLLYQSQRQYQYAIDDFSTAIGLSQQQAEPYVARALTYLAIGDTKAAADDLDDAV 207

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            ++P NI+    R   Y    +  +A   Y  AL L  D
Sbjct: 208 QMEPENIQAWTSRGLAYERQNDREKAAGSYAKALALRKD 246


>gi|445062771|ref|ZP_21375099.1| TPR domain-containing protein, partial [Brachyspira hampsonii
           30599]
 gi|444505847|gb|ELV06281.1| TPR domain-containing protein, partial [Brachyspira hampsonii
           30599]
          Length = 430

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 140/291 (48%), Gaps = 7/291 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ +   G Y  AI+ + ++++ +     +   R  A    +  E A+ D+ +AI+ NP 
Sbjct: 24  GLLEYKLGNYKDAINYYTKMIEMNDDIYYSYYNRALAEESLQLYEEALEDYNKAIELNPE 83

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              ++  RG  +  +    EA++D +KA+E E N A + + R ++  +   +  A+ED  
Sbjct: 84  DTYSYNNRGLIKNEMQMYDEALEDYNKAIELEKNDAYLYNNRALLKGRMHLYKEAIEDFD 143

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + L   +   Y Y GL  S + E  +A +   KAI+LD N++ A+      Y   ++ 
Sbjct: 144 KAISLYDGDSEFYYYRGLTSSYLNELDEALKYINKAIELDTNYINAYNERGLIYYRNSDY 203

Query: 568 EKALECLQQVLYIDKRFSKA-YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           + A++  ++V+ +D     A YHL  L    L +++ A+K  +  + ++P+  +  Y RA
Sbjct: 204 DSAIKDFKKVIELDNENVYANYHL-ALSYDALEEYETALKYYTRVIELEPNTPDAFYNRA 262

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIALYT 672
                +  Y EAI+D+   +D++   ++ +         L  YQK +  YT
Sbjct: 263 LAEIEMELYHEAIEDFYKVIDIDSTIIDAYFNIGICYDSLKDYQKAVECYT 313



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 41/234 (17%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI DF +AI       E +  RG   + L E  EA++ ++KA+E + N  +  +ERG++ 
Sbjct: 138 AIEDFDKAISLYDGDSEFYYYRGLTSSYLNELDEALKYINKAIELDTNYINAYNERGLIY 197

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---- 549
           ++  D+++A++D    ++LD EN  A  +L L+  ++ EY+ A + + + I+L+ N    
Sbjct: 198 YRNSDYDSAIKDFKKVIELDNENVYANYHLALSYDALEEYETALKYYTRVIELEPNTPDA 257

Query: 550 ------------------------------FLEAWGHLTQFYQDLANSEKALECLQQVLY 579
                                          ++A+ ++   Y  L + +KA+EC  +V+ 
Sbjct: 258 FYNRALAEIEMELYHEAIEDFYKVIDIDSTIIDAYFNIGICYDSLKDYQKAVECYTKVIE 317

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
            D     AY+ RGL   GL  + +A +D    L I+P         A+ Y+ IG
Sbjct: 318 TDNYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPK-------YANAYNGIG 364



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 100/199 (50%), Gaps = 2/199 (1%)

Query: 469 IQDLSKALEF--EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           + D  KALE+  E N   I ++ G++ +K  ++  A+   +  ++++ +   +Y    LA
Sbjct: 1   MADYKKALEYADEDNIISIYNDMGLLEYKLGNYKDAINYYTKMIEMNDDIYYSYYNRALA 60

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
             S+  Y++A E + KAI+L+     ++ +      ++   ++ALE   + + ++K  + 
Sbjct: 61  EESLQLYEEALEDYNKAIELNPEDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEKNDAY 120

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            Y+ R LL   +  +K+AI+D    + +   + E  Y R      + E  EA+K  + A+
Sbjct: 121 LYNNRALLKGRMHLYKEAIEDFDKAISLYDGDSEFYYYRGLTSSYLNELDEALKYINKAI 180

Query: 647 DLELDSMEKFVLQCLAFYQ 665
           +L+ + +  +  + L +Y+
Sbjct: 181 ELDTNYINAYNERGLIYYR 199



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 64/131 (48%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y +A+  + ++++ +P  P+A   R  A         AI DF + I  + +  +A+   
Sbjct: 236 EYETALKYYTRVIELEPNTPDAFYNRALAEIEMELYHEAIEDFYKVIDIDSTIIDAYFNI 295

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G    +L +  +A++  +K +E +  S D  + RG+     K +N A ED    ++++ +
Sbjct: 296 GICYDSLKDYQKAVECYTKVIETDNYSIDAYYNRGLSKVGLKLYNEAYEDYIRALEINPK 355

Query: 516 NKSAYTYLGLA 526
             +AY  +G +
Sbjct: 356 YANAYNGIGFS 366



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 5/149 (3%)

Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
           L+  +D L+E     K       TR+ + +  + D   +R +A++    Y  AI  F ++
Sbjct: 227 LALSYDALEEYETALK-----YYTRVIELEPNTPDAFYNRALAEIEMELYHEAIEDFYKV 281

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           +  D    +A    G      ++ + A+  +T+ I+++  + +A+  RG ++  L    E
Sbjct: 282 IDIDSTIIDAYFNIGICYDSLKDYQKAVECYTKVIETDNYSIDAYYNRGLSKVGLKLYNE 341

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKF 496
           A +D  +ALE  P  A+  +  G    K+
Sbjct: 342 AYEDYIRALEINPKYANAYNGIGFSKTKY 370


>gi|119510384|ref|ZP_01629518.1| Serine/Threonine protein kinase with TPR repeats [Nodularia
           spumigena CCY9414]
 gi|119464913|gb|EAW45816.1| Serine/Threonine protein kinase with TPR repeats [Nodularia
           spumigena CCY9414]
          Length = 671

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 2/218 (0%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           +AA+ +FT+AI  +     A+ +RG A   LG+  +A  D +KA+E  P +A+  ++RG 
Sbjct: 330 QAAVENFTQAIALDSENASAYNKRGNAFYQLGDYQQAKADTTKAIELNPQNANAYYDRGF 389

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             ++   +  A+ D +  ++L+  N  AY   GLAL  + E + A E    AI+L  N++
Sbjct: 390 ALYELGKYKEAISDYTKAIELNSGNAYAYYGRGLALVQMQENRDANEDFSTAIRLQPNYI 449

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           EA+       + L     A +    ++ I+   ++ Y+ +GL+     Q   AIK+ +  
Sbjct: 450 EAYLQRGILRRRLKIYRTANQDFDAIIKINPDDARPYYQKGLIQASNNQKYAAIKEYTQA 509

Query: 612 LGIDPSNIECLYLRASCYHA-IGEYREAIKDYDAALDL 648
           +  +P N    YLR    H+ +G   EA +DY+  L L
Sbjct: 510 INRNP-NYAVAYLRRGNMHSELGYKLEATEDYNRVLQL 546



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 126/262 (48%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G Y  A +   + ++ +P    A   RG A     + + AISD+T+AI+ N 
Sbjct: 353 RGNAFYQLGDYQQAKADTTKAIELNPQNANAYYDRGFALYELGKYKEAISDYTKAIELNS 412

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG A   + E+ +A +D S A+  +PN  +   +RGI+  + K +  A +D 
Sbjct: 413 GNAYAYYGRGLALVQMQENRDANEDFSTAIRLQPNYIEAYLQRGILRRRLKIYRTANQDF 472

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            A +K++ ++   Y   GL  +S  +   A + + +AI  + N+  A+      + +L  
Sbjct: 473 DAIIKINPDDARPYYQKGLIQASNNQKYAAIKEYTQAINRNPNYAVAYLRRGNMHSELGY 532

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A E   +VL ++ ++  AY+ RG+     G ++ AI D +  + ++  +      R 
Sbjct: 533 KLEATEDYNRVLQLNPQWGAAYNHRGIHRLSFGDYQGAIADHTKAIELNSQDAAAYNNRG 592

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
           +  +  G Y+ A +DY  A+ +
Sbjct: 593 NANYQQGNYKAANEDYTQAIAI 614



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 88/174 (50%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           ++  L RGI +     Y +A   FD I+K +P        +G  +A   +  AAI ++T+
Sbjct: 449 IEAYLQRGILRRRLKIYRTANQDFDAIIKINPDDARPYYQKGLIQASNNQKYAAIKEYTQ 508

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI  NP+   A+ RRG   + LG  +EA +D ++ L+  P      + RGI    F D+ 
Sbjct: 509 AINRNPNYAVAYLRRGNMHSELGYKLEATEDYNRVLQLNPQWGAAYNHRGIHRLSFGDYQ 568

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            A+ D +  ++L+ ++ +AY   G A    G YK A E + +AI ++  +  A+
Sbjct: 569 GAIADHTKAIELNSQDAAAYNNRGNANYQQGNYKAANEDYTQAIAINSKYGLAY 622



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 94/185 (50%), Gaps = 18/185 (9%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L++ G+  ++  ++ AAVE+ +  + LD EN SAY   G A   +G+Y++A+    KAI+
Sbjct: 316 LYQEGLKKYQAGNYQAAVENFTQAIALDSENASAYNKRGNAFYQLGDYQQAKADTTKAIE 375

Query: 546 L---------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
           L         DR F  A   L ++ + +++  KA+E       ++   + AY+ RGL L 
Sbjct: 376 LNPQNANAYYDRGF--ALYELGKYKEAISDYTKAIE-------LNSGNAYAYYGRGLALV 426

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            + +++ A +D S+ + + P+ IE    R      +  YR A +D+DA + +  D    +
Sbjct: 427 QMQENRDANEDFSTAIRLQPNYIEAYLQRGILRRRLKIYRTANQDFDAIIKINPDDARPY 486

Query: 657 VLQCL 661
             + L
Sbjct: 487 YQKGL 491



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 26/169 (15%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N + A+E   Q + +D   + AY+ RG   + LG +++A  D +  + ++P N    Y 
Sbjct: 327 GNYQAAVENFTQAIALDSENASAYNKRGNAFYQLGDYQQAKADTTKAIELNPQNANAYYD 386

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASK---INSEFC 681
           R    + +G+Y+EAI DY  A  +EL+S   +     A+Y + +AL    +    N +F 
Sbjct: 387 RGFALYELGKYKEAISDYTKA--IELNSGNAY-----AYYGRGLALVQMQENRDANEDFS 439

Query: 682 WFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKLRRQDF 730
                             RL P N  E   ++  LR  LK  +   QDF
Sbjct: 440 ---------------TAIRLQP-NYIEAYLQRGILRRRLKIYRTANQDF 472



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 12/165 (7%)

Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
           K+  +KE +    RN  + V              L RG      G    A   ++++L+ 
Sbjct: 499 KYAAIKEYTQAINRNPNYAVAY------------LRRGNMHSELGYKLEATEDYNRVLQL 546

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P +  A   RG  R    + + AI+D T+AI+ N     A+  RG A    G    A +
Sbjct: 547 NPQWGAAYNHRGIHRLSFGDYQGAIADHTKAIELNSQDAAAYNNRGNANYQQGNYKAANE 606

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           D ++A+          + RG+   K  +   A+ D    ++L +E
Sbjct: 607 DYTQAIAINSKYGLAYYNRGVTRAKQGNRQGAIADFQQAIRLFRE 651


>gi|338209911|ref|YP_004653958.1| hypothetical protein [Runella slithyformis DSM 19594]
 gi|336303724|gb|AEI46826.1| Tetratricopeptide TPR_1 repeat-containing protein [Runella
           slithyformis DSM 19594]
          Length = 443

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 38/316 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RGI +V       A+  F+  L+ +P   +AL+ RG       + + A+ DF   +  
Sbjct: 97  LHRGICRVLLDDIGGALRDFNSSLELNPNEAKALLERGQIWVKMDDPKRALQDFDRGLML 156

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P+   AW  RGQ + ALG+   ++ D +KA+E    +A     RG    +  D N AV 
Sbjct: 157 EPTNVFAWNSRGQCKLALGDFKGSVTDFTKAIELGYTAA--YAGRGNARTRLNDLNGAVT 214

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGH------- 556
           DL+  V+L+ ++  ++ Y GL  S + ++  A   + +AI+L+ ++++  +G        
Sbjct: 215 DLTKAVELNLKDSESFYYRGLVRSKMNKFADALADYNEAIRLNPQSYMAYYGRGVCKAKL 274

Query: 557 ----------------------LTQFYQDLA--NSEKALECLQQVLYIDKRFS----KAY 588
                                    +Y DL   NS K L+ +       K  S    + Y
Sbjct: 275 GNAADAVVDYNKAIEINGASAATLPYYNDLITENSIKLLDVIITKYTQPKDLSPGRPEVY 334

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             RG+  + +G+ K AI DL   + I+P+N +  ++RA    ++G+ + A+ D  +A+ L
Sbjct: 335 LSRGIAKNTIGEGKSAIADLDKAIQIEPTNSDSYFIRAVVKSSLGDQKGALVDCSSAIKL 394

Query: 649 ELDSMEKFVLQCLAFY 664
                E F L+ +  Y
Sbjct: 395 SPRHAEAFFLRGVIKY 410



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 132/281 (46%), Gaps = 2/281 (0%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
             ++ +S +++ + +     GI + ++G  A A+  F   ++ +  Y      RG  +  
Sbjct: 12  LLLSGLSYAQTSTYEVFFQEGITKQSKGDIAGAMIAFSSAIQANVDYAPGYYQRGQLKIS 71

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
            ++   A+ DF EAI       +A+  RG  R  L +   A++D + +LE  PN A  L 
Sbjct: 72  LKDYRGAMRDFDEAIGITSQDPKAFLHRGICRVLLDDIGGALRDFNSSLELNPNEAKALL 131

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           ERG +  K  D   A++D    + L+  N  A+   G    ++G++K +     KAI+L 
Sbjct: 132 ERGQIWVKMDDPKRALQDFDRGLMLEPTNVFAWNSRGQCKLALGDFKGSVTDFTKAIEL- 190

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
             +  A+         L +   A+  L + + ++ + S++++ RGL+   + +   A+ D
Sbjct: 191 -GYTAAYAGRGNARTRLNDLNGAVTDLTKAVELNLKDSESFYYRGLVRSKMNKFADALAD 249

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            +  + ++P +    Y R  C   +G   +A+ DY+ A+++
Sbjct: 250 YNEAIRLNPQSYMAYYGRGVCKAKLGNAADAVVDYNKAIEI 290



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 71/138 (51%), Gaps = 6/138 (4%)

Query: 344 SRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISV---DFRLSRGIAQVNEGKYASA 400
           S + L +  D++ E S    +     +T+ ++ K +S    +  LSRGIA+   G+  SA
Sbjct: 294 SAATLPYYNDLITENS---IKLLDVIITKYTQPKDLSPGRPEVYLSRGIAKNTIGEGKSA 350

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I+  D+ ++ +P   ++   R   ++   + + A+ D + AI+ +P   EA+  RG  + 
Sbjct: 351 IADLDKAIQIEPTNSDSYFIRAVVKSSLGDQKGALVDCSSAIKLSPRHAEAFFLRGVIKY 410

Query: 461 ALGESVEAIQDLSKALEF 478
           +L +  +A  D SKA E+
Sbjct: 411 SLLDKNDACYDFSKAGEY 428


>gi|354567937|ref|ZP_08987104.1| Tetratricopeptide TPR_2 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353541611|gb|EHC11078.1| Tetratricopeptide TPR_2 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 539

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 3/252 (1%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G+Y +AI  ++Q L+  P   +    RG AR    + E AI+D+T+AI  NP+  +A+ 
Sbjct: 257 KGQYHAAIINYNQALQLYPYDADIYYKRGLARYQLGDYEGAIADYTQAITINPNYIKAYN 316

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           + G AR  LG+   AI D + A+   PN       R  + +   D   A+ED +   ++ 
Sbjct: 317 KSGLARYQLGDYEGAIADYTHAIIINPNDVVAYKNRADIRYYLGDKQGAIEDYTQVCQMY 376

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
              ++    L L    IG+Y+   +  L+  +L  +   A+ +      DL + E A+  
Sbjct: 377 PHPEAD---LNLKNMQIGDYQGEGDVFLQTSELKCHDFVAYKNRGDLRLDLGDYEGAIAD 433

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             Q + I+   + AY+ RG   + LG +  AI D +  + I+ ++ +  Y R +    +G
Sbjct: 434 YTQAIKINSHDADAYYNRGNARYDLGDYAGAIADYTETIKINFNDADAYYNRGNARCCLG 493

Query: 634 EYREAIKDYDAA 645
           + + AI D+  A
Sbjct: 494 DKQGAIADFHKA 505



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 17/234 (7%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +  AAI ++ +A+Q  P   + + +RG AR  LG+   AI D ++A+   PN     ++ 
Sbjct: 259 QYHAAIINYNQALQLYPYDADIYYKRGLARYQLGDYEGAIADYTQAITINPNYIKAYNKS 318

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYT-------YLGLALSSIGEYKKAEEAHLK 542
           G+  ++  D+  A+ D +  + ++  +  AY        YLG    +I +Y +  + +  
Sbjct: 319 GLARYQLGDYEGAIADYTHAIIINPNDVVAYKNRADIRYYLGDKQGAIEDYTQVCQMYPH 378

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
             + D N         Q   D+      L+C   V         AY  RG L   LG ++
Sbjct: 379 P-EADLNLKNMQIGDYQGEGDVFLQTSELKCHDFV---------AYKNRGDLRLDLGDYE 428

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            AI D +  + I+  + +  Y R +  + +G+Y  AI DY   + +  +  + +
Sbjct: 429 GAIADYTQAIKINSHDADAYYNRGNARYDLGDYAGAIADYTETIKINFNDADAY 482


>gi|431808131|ref|YP_007235029.1| hypothetical protein BPP43_07840 [Brachyspira pilosicoli P43/6/78]
 gi|430781490|gb|AGA66774.1| TPR domain-containing protein [Brachyspira pilosicoli P43/6/78]
          Length = 595

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 96/168 (57%)

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+  RG A++ L  + EAI+D  KA+E  PNS++  + RG        +  A++D    +
Sbjct: 352 AYYNRGNAKSDLDYNEEAIKDYDKAIELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAI 411

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           +L+  N  AY   G   S +  Y++A + + KAI+L+ N  EA+ ++     +L  +E+A
Sbjct: 412 ELNPNNSEAYNNRGNIKSYLELYEEAIKDYNKAIELNPNNSEAYNNIGTAKSNLGYNEEA 471

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           ++   +V+ ++  +S AY+ RG+  H L ++K+AIKD    + ++PSN
Sbjct: 472 IKIYDKVIELNPNYSNAYNNRGVSKHKLEKYKEAIKDYDKAIELNPSN 519



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 76/140 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+   G Y  AI  FD+ ++ +P   EA   RG  +++    E AI D+ +AI+ N
Sbjct: 389 NRGNAKSYLGLYKEAIKDFDKAIELNPNNSEAYNNRGNIKSYLELYEEAIKDYNKAIELN 448

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+   G A++ LG + EAI+   K +E  PN ++  + RG+   K + +  A++D
Sbjct: 449 PNNSEAYNNIGTAKSNLGYNEEAIKIYDKVIELNPNYSNAYNNRGVSKHKLEKYKEAIKD 508

Query: 506 LSACVKLDKENKSAYTYLGL 525
               ++L+  N  AY  + L
Sbjct: 509 YDKAIELNPSNSDAYFNMVL 528



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 97/182 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+ +      AI  +D+ ++ +P   E    RG A+++    + AI DF +AI+ N
Sbjct: 355 NRGNAKSDLDYNEEAIKDYDKAIELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAIELN 414

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+  RG  ++ L    EAI+D +KA+E  PN+++  +  G           A++ 
Sbjct: 415 PNNSEAYNNRGNIKSYLELYEEAIKDYNKAIELNPNNSEAYNNIGTAKSNLGYNEEAIKI 474

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L+    +AY   G++   + +YK+A + + KAI+L+ +  +A+ ++    Q LA
Sbjct: 475 YDKVIELNPNYSNAYNNRGVSKHKLEKYKEAIKDYDKAIELNPSNSDAYFNMVLPKQLLA 534

Query: 566 NS 567
           N+
Sbjct: 535 NT 536



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 30/172 (17%)

Query: 48  SLRNWSKAIRILDSLLA-------QSYEIQDIC-----NRAFCYSQLELHKHVIRDCDKA 95
           S+  ++K I + D LL        + Y+ ++ C     NR    S L+ ++  I+D DKA
Sbjct: 317 SINYYNKIIEMTDELLKGYDENSEEYYQYKNYCFIAYYNRGNAKSDLDYNEEAIKDYDKA 376

Query: 96  LQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE------HALHQSADLKQFLELEEL 149
           ++L+P   + Y  +G A S LG  +EA+  ++K  E       A +   ++K +LEL E 
Sbjct: 377 IELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAIELNPNNSEAYNNRGNIKSYLELYE- 435

Query: 150 LTAAKQDRSVTCEYDVSNS---------MSSLTVSESGLNANDKMSETSENH 192
              A +D +   E + +NS          S+L  +E  +   DK+ E + N+
Sbjct: 436 --EAIKDYNKAIELNPNNSEAYNNIGTAKSNLGYNEEAIKIYDKVIELNPNY 485



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 53/94 (56%)

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           DL  +E+A++   + + ++   S+ Y+ RG     LG +K+AIKD    + ++P+N E  
Sbjct: 362 DLDYNEEAIKDYDKAIELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAIELNPNNSEAY 421

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             R +    +  Y EAIKDY+ A++L  ++ E +
Sbjct: 422 NNRGNIKSYLELYEEAIKDYNKAIELNPNNSEAY 455


>gi|428772227|ref|YP_007164015.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
 gi|428686506|gb|AFZ46366.1| serine/threonine protein kinase [Cyanobacterium stanieri PCC 7202]
          Length = 697

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/266 (24%), Positives = 128/266 (48%), Gaps = 5/266 (1%)

Query: 357 ETSNEAKRNKKFCVTRISKSKSIS-----VDFRLSRGIAQVNEGKYASAISIFDQILKED 411
           E  N A     + V  I  S ++      VD   +RGI+    G+Y  AI+ +++I++ D
Sbjct: 417 ELGNRAYDRGSYDVAIIHYSSALRQDPNYVDAYNNRGISYHALGEYEKAIADYERIMELD 476

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P Y  A   RG A  F  E E AI+D+ +A+  +P+   A+   G     LGE  +AI +
Sbjct: 477 PRYMRAYYNRGNAYKFLGEYERAIADYRQAVNLDPTYTHAYYNLGNTYRDLGEEEKAIIE 536

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
               +  + +  +  + RGI N+   D+  ++ D +  + LD E+ +A    G +  ++ 
Sbjct: 537 YDIVIALDNSYKNAHYNRGIANYNLGDYEESIRDNTEVLTLDAEDTNALINRGNSYFNLE 596

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
            Y +A   + + I+LD ++  A+ +    Y+   N ++A+   Q+ L ++     +++  
Sbjct: 597 LYDQAMADYNRVIELDPDYQIAYYNRGNVYRVRENYQRAIADYQKSLDLNPNHLDSHNNM 656

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPS 617
            L    +G  ++AI+     + ++P+
Sbjct: 657 ALSYEKMGNIQRAIEGYQRAIALNPN 682



 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 5/212 (2%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AI   S AL  +PN  D  + RGI      ++  A+ D    ++LD     AY   G A 
Sbjct: 431 AIIHYSSALRQDPNYVDAYNNRGISYHALGEYEKAIADYERIMELDPRYMRAYYNRGNAY 490

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             +GEY++A   + +A+ LD  +  A+ +L   Y+DL   EKA+     V+ +D  +  A
Sbjct: 491 KFLGEYERAIADYRQAVNLDPTYTHAYYNLGNTYRDLGEEEKAIIEYDIVIALDNSYKNA 550

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           ++ RG+  + LG ++++I+D +  L +D  +   L  R + Y  +  Y +A+ DY+  ++
Sbjct: 551 HYNRGIANYNLGDYEESIRDNTEVLTLDAEDTNALINRGNSYFNLELYDQAMADYNRVIE 610

Query: 648 LELDSMEKF-----VLQCLAFYQKEIALYTAS 674
           L+ D    +     V +    YQ+ IA Y  S
Sbjct: 611 LDPDYQIAYYNRGNVYRVRENYQRAIADYQKS 642



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 120/256 (46%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           + G Y  AI  +   L++DP Y +A   RG +     E E AI+D+   ++ +P    A+
Sbjct: 424 DRGSYDVAIIHYSSALRQDPNYVDAYNNRGISYHALGEYEKAIADYERIMELDPRYMRAY 483

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             RG A   LGE   AI D  +A+  +P      +  G       +   A+ +    + L
Sbjct: 484 YNRGNAYKFLGEYERAIADYRQAVNLDPTYTHAYYNLGNTYRDLGEEEKAIIEYDIVIAL 543

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           D   K+A+   G+A  ++G+Y+++   + + + LD     A  +    Y +L   ++A+ 
Sbjct: 544 DNSYKNAHYNRGIANYNLGDYEESIRDNTEVLTLDAEDTNALINRGNSYFNLELYDQAMA 603

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              +V+ +D  +  AY+ RG +      +++AI D    L ++P++++     A  Y  +
Sbjct: 604 DYNRVIELDPDYQIAYYNRGNVYRVRENYQRAIADYQKSLDLNPNHLDSHNNMALSYEKM 663

Query: 633 GEYREAIKDYDAALDL 648
           G  + AI+ Y  A+ L
Sbjct: 664 GNIQRAIEGYQRAIAL 679



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 116/259 (44%), Gaps = 13/259 (5%)

Query: 425 RAFQR-ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
           RA+ R   + AI  ++ A++ +P+  +A+  RG +  ALGE  +AI D  + +E +P   
Sbjct: 421 RAYDRGSYDVAIIHYSSALRQDPNYVDAYNNRGISYHALGEYEKAIADYERIMELDPRYM 480

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
              + RG       ++  A+ D    V LD     AY  LG     +GE +KA   +   
Sbjct: 481 RAYYNRGNAYKFLGEYERAIADYRQAVNLDPTYTHAYYNLGNTYRDLGEEEKAIIEYDIV 540

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
           I LD ++  A  +      +L + E+++    +VL +D   + A   RG     L  + +
Sbjct: 541 IALDNSYKNAHYNRGIANYNLGDYEESIRDNTEVLTLDAEDTNALINRGNSYFNLELYDQ 600

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL---ELDSMEKFVL-- 658
           A+ D +  + +DP      Y R + Y     Y+ AI DY  +LDL    LDS     L  
Sbjct: 601 AMADYNRVIELDPDYQIAYYNRGNVYRVRENYQRAIADYQKSLDLNPNHLDSHNNMALSY 660

Query: 659 -------QCLAFYQKEIAL 670
                  + +  YQ+ IAL
Sbjct: 661 EKMGNIQRAIEGYQRAIAL 679



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/327 (21%), Positives = 141/327 (43%), Gaps = 20/327 (6%)

Query: 361 EAKRNKKF-----CVTRISKSKSI----SVDFRLSRGIAQVNEGKYASAISIFDQILKED 411
           E++ NK+F      +  + K + +    S D    RG   +    Y +A+  F  +++ D
Sbjct: 272 ESRINKRFQTVDEVLEALDKVEDVVAQSSADLYFERGNYYLELQDYKNALDCFQNVIRID 331

Query: 412 PMYPEALIGRGTARAFQRELEAAIS---DFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           P Y  A   R  A     +L+   +      + +Q +P                G  V+ 
Sbjct: 332 PSYGFAYQRRDFAHQQLAKLDRKGNLSWRLKKVLQLSPFVAFGAIALYALLPTSGRMVDV 391

Query: 469 IQDLSKALEFEPNSADI-------LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           +  + +A   E NS D         +E G   +    ++ A+   S+ ++ D     AY 
Sbjct: 392 VNPV-EAESVEVNSRDFSDLLPSRYYELGNRAYDRGSYDVAIIHYSSALRQDPNYVDAYN 450

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G++  ++GEY+KA   + + ++LD  ++ A+ +    Y+ L   E+A+   +Q + +D
Sbjct: 451 NRGISYHALGEYEKAIADYERIMELDPRYMRAYYNRGNAYKFLGEYERAIADYRQAVNLD 510

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
             ++ AY+  G     LG+ +KAI +    + +D S     Y R    + +G+Y E+I+D
Sbjct: 511 PTYTHAYYNLGNTYRDLGEEEKAIIEYDIVIALDNSYKNAHYNRGIANYNLGDYEESIRD 570

Query: 642 YDAALDLELDSMEKFVLQCLAFYQKEI 668
               L L+ +     + +  +++  E+
Sbjct: 571 NTEVLTLDAEDTNALINRGNSYFNLEL 597



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 76/166 (45%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+   AI  +D ++  D  Y  A   RG A     + E +I D TE +  +     A   
Sbjct: 528 GEEEKAIIEYDIVIALDNSYKNAHYNRGIANYNLGDYEESIRDNTEVLTLDAEDTNALIN 587

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG +   L    +A+ D ++ +E +P+     + RG V    +++  A+ D    + L+ 
Sbjct: 588 RGNSYFNLELYDQAMADYNRVIELDPDYQIAYYNRGNVYRVRENYQRAIADYQKSLDLNP 647

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            +  ++  + L+   +G  ++A E + +AI L+ N+  A  +L + 
Sbjct: 648 NHLDSHNNMALSYEKMGNIQRAIEGYQRAIALNPNYQLAIDNLNRL 693



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 45/245 (18%)

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           +R Q    + E+++ ++D+        +SAD+  ERG    + +D+  A++     +++D
Sbjct: 277 KRFQTVDEVLEALDKVEDVVAQ-----SSADLYFERGNYYLELQDYKNALDCFQNVIRID 331

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-----HLTQF-------- 560
                     G A      Y++ + AH +  +LDR    +W       L+ F        
Sbjct: 332 PS-------YGFA------YQRRDFAHQQLAKLDRKGNLSWRLKKVLQLSPFVAFGAIAL 378

Query: 561 YQDLANSEKALECLQQV----LYIDKR-----FSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           Y  L  S + ++ +  V    + ++ R         Y+  G   +  G +  AI   SS 
Sbjct: 379 YALLPTSGRMVDVVNPVEAESVEVNSRDFSDLLPSRYYELGNRAYDRGSYDVAIIHYSSA 438

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQK 666
           L  DP+ ++    R   YHA+GEY +AI DY+  ++L+   M  +       + L  Y++
Sbjct: 439 LRQDPNYVDAYNNRGISYHALGEYEKAIADYERIMELDPRYMRAYYNRGNAYKFLGEYER 498

Query: 667 EIALY 671
            IA Y
Sbjct: 499 AIADY 503


>gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A]
 gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 1121

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 10/254 (3%)

Query: 390  AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
            A +N G+Y  AI+ F+ +L+ +P   EAL GR  A A     E A+ D+   +Q +PS  
Sbjct: 753  ALINLGRYEEAIACFNPLLELEPENIEALDGRALALARSERREEALEDYNRILQLDPSNT 812

Query: 450  EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
            +A   +      LG   EA     + L   P + +I++ +G       DF AA+      
Sbjct: 813  KALAEKASLFEELGRYEEAASTYGEILLITPENREIMYRQGKALEAKGDFEAAIACYDQI 872

Query: 510  VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN--- 566
            + LD +N  A    G A + +  Y++A  ++ KAI+   N   AW     +++  AN   
Sbjct: 873  LTLDPKNIDAINNKGFAYAKMERYQEAIASYDKAIEYAPNNAAAW-----YFKGCANFAI 927

Query: 567  --SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              +  A+EC  +V+ +      A++ +G L + +G+  ++I      L I+P+    LY 
Sbjct: 928  SSNIAAVECFDKVVQLKPDCITAWYNKGYLYNVMGEVNESINSYDGALAINPNEPSILYN 987

Query: 625  RASCYHAIGEYREA 638
            +   ++ I EY +A
Sbjct: 988  KRFAHYRIKEYEDA 1001



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 133/290 (45%), Gaps = 4/290 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A  +  +Y  AI  +D+ L+  P    +   +G      +    AIS + +++ ++ 
Sbjct: 103 KGCALTSLERYEEAIDCYDRALESFPASSWSWYQKGNGYLQTQNYVEAISCYEKSLATDS 162

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                W ++  A   LG   EA+     +++   N +  L  +G      ++++ A++  
Sbjct: 163 YLSRVWFQKALASEKLGLEQEALASYDSSIDLGSNVSKTLQMQGKAYTGLENYDEAMKCF 222

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + +  ++   +T  G+     G+Y+ A + + +AI L+ +  EAW +     + +  
Sbjct: 223 DGALNITPDDSELWTQKGIMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEGMEM 282

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            + AL C + VL  +     A   +G  L  LG++++A++     L  +P N +  Y + 
Sbjct: 283 YQDALTCYEFVLLSEPENLSALQKKGFCLEQLGRNEEALQCYEEILIYNPDNADAWYSKG 342

Query: 627 SCYHAIGEYREAIKDYDAALD----LELDSMEKFVLQCLAFYQKEIALYT 672
           S  +A+G+Y  AI  YD AL+    +E++ +   +L+    Y   + +Y+
Sbjct: 343 SVLNAMGDYDAAIACYDRALNPDAGIEVEEVGDALLEEFNAYDSSLPIYS 392



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 108/251 (43%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A+  +D  L  +P+  EA   +G+A       E A+  + +A+  +P +  AW    
Sbjct: 658 YEDALYAYDTALSINPLRTEAWYEKGSALDKLGRSEEALECYKKALDLDPQSSNAWYGMA 717

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                LG S EA+    + L    +  + L  +         +  A+   +  ++L+ EN
Sbjct: 718 STSNTLGRSEEAVAYYDQLLAANASDPEALQGKSEALINLGRYEEAIACFNPLLELEPEN 777

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A     LAL+     ++A E + + +QLD +  +A       +++L   E+A     +
Sbjct: 778 IEALDGRALALARSERREEALEDYNRILQLDPSNTKALAEKASLFEELGRYEEAASTYGE 837

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
           +L I     +  + +G  L   G  + AI      L +DP NI+ +  +   Y  +  Y+
Sbjct: 838 ILLITPENREIMYRQGKALEAKGDFEAAIACYDQILTLDPKNIDAINNKGFAYAKMERYQ 897

Query: 637 EAIKDYDAALD 647
           EAI  YD A++
Sbjct: 898 EAIASYDKAIE 908



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 79/401 (19%), Positives = 170/401 (42%), Gaps = 28/401 (6%)

Query: 295 ERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTES----RSKLSF 350
           +  G+   G  +  + +     +LN +  +SE +++  I  + S D   +       +S 
Sbjct: 203 QMQGKAYTGLENYDEAMKCFDGALNITPDDSELWTQKGIMYDMSGDYEAAIQCYDEAISL 262

Query: 351 KWDMLKETSN--------EAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAIS 402
             D+ +   N        E  ++   C   +  S+  ++     +G      G+   A+ 
Sbjct: 263 NPDLTEAWYNKGVDLEGMEMYQDALTCYEFVLLSEPENLSALQKKGFCLEQLGRNEEALQ 322

Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
            +++IL  +P   +A   +G+      + +AAI+ +  A+  NP AG   +  G A   L
Sbjct: 323 CYEEILIYNPDNADAWYSKGSVLNAMGDYDAAIACYDRAL--NPDAGIEVEEVGDA---L 377

Query: 463 GESVEA----IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
            E   A    +   S+  EF+ ++  I +++G+   K +++ +A+E   + ++ +  +  
Sbjct: 378 LEEFNAYDSSLPIYSEVPEFKSSAVKIWYDKGLAFDKLENYESALECYDSVLETESGHAM 437

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
            +   G  L  +  Y++A + + KA++LD  + + W         L   + A +   + +
Sbjct: 438 VWYRKGQDLDRLNRYEEAADCYDKALKLDSGYAKVWHRKGYDSSKLGQYKDAAKSFDKAV 497

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            +D+ ++ A++ +   L   G +++A+      L   P + E  Y +      +  Y+EA
Sbjct: 498 NLDENYTLAWYGKAFALSKTGDYEEALACYEKVLAAAPDSAEIWYNKGLLLDQLERYQEA 557

Query: 639 IKDYDAALDLELD-SMEKFVLQCLAFYQKEIALYTASKINS 678
              Y  AL +    S+ +F L       K++ LY  S  NS
Sbjct: 558 SDCYSQALQINPGYSIARFRL------NKDMELYGDSTPNS 592



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/243 (21%), Positives = 110/243 (45%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            +++L + P+  E L+ +G      +E E +I  F +A++ + ++  AW  +G A  +L 
Sbjct: 52  LEEVLAQRPVSVEGLLNKGNNLYSLKEYELSIECFDDALEMDSNSSMAWYGKGCALTSLE 111

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
              EAI    +ALE  P S+   +++G    + +++  A+      +  D      +   
Sbjct: 112 RYEEAIDCYDRALESFPASSWSWYQKGNGYLQTQNYVEAISCYEKSLATDSYLSRVWFQK 171

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
            LA   +G  ++A  ++  +I L  N  +      + Y  L N ++A++C    L I   
Sbjct: 172 ALASEKLGLEQEALASYDSSIDLGSNVSKTLQMQGKAYTGLENYDEAMKCFDGALNITPD 231

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            S+ +  +G++    G ++ AI+     + ++P   E  Y +      +  Y++A+  Y+
Sbjct: 232 DSELWTQKGIMYDMSGDYEAAIQCYDEAISLNPDLTEAWYNKGVDLEGMEMYQDALTCYE 291

Query: 644 AAL 646
             L
Sbjct: 292 FVL 294



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 77/167 (46%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            +G A   +G + +AI+ +DQIL  DP   +A+  +G A A     + AI+ + +AI+  P
Sbjct: 852  QGKALEAKGDFEAAIACYDQILTLDPKNIDAINNKGFAYAKMERYQEAIASYDKAIEYAP 911

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            +   AW  +G A  A+  ++ A++   K ++ +P+     + +G +     + N ++   
Sbjct: 912  NNAAAWYFKGCANFAISSNIAAVECFDKVVQLKPDCITAWYNKGYLYNVMGEVNESINSY 971

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
               + ++    S       A   I EY+ A     K   +D  F+ A
Sbjct: 972  DGALAINPNEPSILYNKRFAHYRIKEYEDASACKTKLDAIDPGFVAA 1018



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 130/313 (41%), Gaps = 44/313 (14%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A   FD+ +  D  Y  A  G+  A +   + E A++ + + + + P + E W  
Sbjct: 484 GQYKDAAKSFDKAVNLDENYTLAWYGKAFALSKTGDYEEALACYEKVLAAAPDSAEIWYN 543

Query: 455 RGQARAALGESVEAIQDLSKALEFEP---------------------NSAD-----ILHE 488
           +G     L    EA    S+AL+  P                     NS++     +  +
Sbjct: 544 KGLLLDQLERYQEASDCYSQALQINPGYSIARFRLNKDMELYGDSTPNSSEGKDPEVSPK 603

Query: 489 RGI--------VNFKF------KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           + I        + +K+       D +   +DLS     D    SA+       S +  Y+
Sbjct: 604 KAISGGFWSYLLGYKYASSEENSDLSENFDDLSPEFSYD----SAWYGKASTYSKLEMYE 659

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
            A  A+  A+ ++    EAW         L  SE+ALEC ++ L +D + S A++     
Sbjct: 660 DALYAYDTALSINPLRTEAWYEKGSALDKLGRSEEALECYKKALDLDPQSSNAWYGMAST 719

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
            + LG+ ++A+      L  + S+ E L  ++     +G Y EAI  ++  L+LE +++E
Sbjct: 720 SNTLGRSEEAVAYYDQLLAANASDPEALQGKSEALINLGRYEEAIACFNPLLELEPENIE 779

Query: 655 KFVLQCLAFYQKE 667
               + LA  + E
Sbjct: 780 ALDGRALALARSE 792



 Score = 46.6 bits (109), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 3/115 (2%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQSYE-IQD 71
           L ++ + +   D+L+  ++    A+  + E   L +L  + +AI   + LL    E I+ 
Sbjct: 723 LGRSEEAVAYYDQLLAANASDPEALQGKSE--ALINLGRYEEAIACFNPLLELEPENIEA 780

Query: 72  ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
           +  RA   ++ E  +  + D ++ LQLDP+  +A   K   F  LGR EEA S +
Sbjct: 781 LDGRALALARSERREEALEDYNRILQLDPSNTKALAEKASLFEELGRYEEAASTY 835


>gi|427420258|ref|ZP_18910441.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
 gi|425762971|gb|EKV03824.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
          Length = 477

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 10/268 (3%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L++G+          AISIF+ +++  P Y +A   RG A         AI DF+ AI  
Sbjct: 7   LNQGVDLARRQDCLGAISIFNTVIESLPNYAKAYFNRGCAHYAMGNYAVAIEDFSWAIHL 66

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A+  RG A+  LG +  A++D  + ++  P S      RG++  +  ++  AV 
Sbjct: 67  TPDYASAYLNRGNAQRKLGHTDAALEDFERGIQLTPLSTRGYCNRGLLRLEVGNYAGAVR 126

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ 562
           D    ++L       Y + G+A    G++K+A     +A+ L+ +  + +    L  FYQ
Sbjct: 127 DFDYALRLQPHFPRGYLWRGVAWLRCGDFKQAINDLNRALALNPHCAKTYNQRGLAYFYQ 186

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
              + ++AL    Q + +DK  + AY+ R  L   +G +  A+ D    L ++P+     
Sbjct: 187 --VDYKQALADFNQAVDLDKDLADAYNNRAALRTEMGDYAGAMADYCKALHLNPA----- 239

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLEL 650
            L  +    + +   A++DY +   L L
Sbjct: 240 -LPEAYPQTLKQLHNALQDYPSPGKLAL 266



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 23/300 (7%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG+A +  G +  AI+  ++ L  +P   +    RG A  +Q + + A++DF +A+  
Sbjct: 143 LWRGVAWLRCGDFKQAINDLNRALALNPHCAKTYNQRGLAYFYQVDYKQALADFNQAVDL 202

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD-------------------- 484
           +    +A+  R   R  +G+   A+ D  KAL   P   +                    
Sbjct: 203 DKDLADAYNNRAALRTEMGDYAGAMADYCKALHLNPALPEAYPQTLKQLHNALQDYPSPG 262

Query: 485 ---ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
              +L+ RG       D + A+ D +  ++LD  +   Y   GL    +  Y+ A     
Sbjct: 263 KLALLNNRGNTRATLGDSSGALNDYTEALRLDPNHAYVYNNRGLVRLYLHNYEMAATDFS 322

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +AI+L+  F EA+ +     Q L N E AL+ + Q L ++   + AY  RG +   L  +
Sbjct: 323 EAIRLNPQFAEAFSNRGGIRQHLGNLEGALQDINQALDLNPSLANAYVHRGRIHVDLKNY 382

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
            KA+ D +  L + P     L  R+     + +   A+ D + AL+L+    + ++ + L
Sbjct: 383 MKAMADFNKALSLQPDAAHTLNERSVLRFRLNDTEGALADVNRALELQPQFSDAYINRSL 442



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 124/286 (43%), Gaps = 23/286 (8%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A   +  Y  A++ F+Q +  D    +A   R   R    +   A++D+ +A+  NP
Sbjct: 179 RGLAYFYQVDYKQALADFNQAVDLDKDLADAYNNRAALRTEMGDYAGAMADYCKALHLNP 238

Query: 447 SAGEAWKR-----------------------RGQARAALGESVEAIQDLSKALEFEPNSA 483
           +  EA+ +                       RG  RA LG+S  A+ D ++AL  +PN A
Sbjct: 239 ALPEAYPQTLKQLHNALQDYPSPGKLALLNNRGNTRATLGDSSGALNDYTEALRLDPNHA 298

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
            + + RG+V     ++  A  D S  ++L+ +   A++  G     +G  + A +   +A
Sbjct: 299 YVYNNRGLVRLYLHNYEMAATDFSEAIRLNPQFAEAFSNRGGIRQHLGNLEGALQDINQA 358

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
           + L+ +   A+ H  + + DL N  KA+    + L +    +   + R +L   L   + 
Sbjct: 359 LDLNPSLANAYVHRGRIHVDLKNYMKAMADFNKALSLQPDAAHTLNERSVLRFRLNDTEG 418

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           A+ D++  L + P   +    R+      G+   A  D D+ + L 
Sbjct: 419 ALADVNRALELQPQFSDAYINRSLIRFDRGDRSGAFSDLDSVMSLH 464



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 108/236 (45%)

Query: 413 MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
           M  + L+ +G   A +++   AIS F   I+S P+  +A+  RG A  A+G    AI+D 
Sbjct: 1   MTAKDLLNQGVDLARRQDCLGAISIFNTVIESLPNYAKAYFNRGCAHYAMGNYAVAIEDF 60

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           S A+   P+ A     RG    K    +AA+ED    ++L   +   Y   GL    +G 
Sbjct: 61  SWAIHLTPDYASAYLNRGNAQRKLGHTDAALEDFERGIQLTPLSTRGYCNRGLLRLEVGN 120

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           Y  A      A++L  +F   +      +    + ++A+  L + L ++   +K Y+ RG
Sbjct: 121 YAGAVRDFDYALRLQPHFPRGYLWRGVAWLRCGDFKQAINDLNRALALNPHCAKTYNQRG 180

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           L       +K+A+ D +  + +D    +    RA+    +G+Y  A+ DY  AL L
Sbjct: 181 LAYFYQVDYKQALADFNQAVDLDKDLADAYNNRAALRTEMGDYAGAMADYCKALHL 236



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 34/229 (14%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  +   G  + A++ + + L+ DP +      RG  R +    E A +DF+EAI+ N
Sbjct: 269 NRGNTRATLGDSSGALNDYTEALRLDPNHAYVYNNRGLVRLYLHNYEMAATDFSEAIRLN 328

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA+  RG  R  LG    A+QD+++AL+  P+ A+    RG ++   K++  A+ D
Sbjct: 329 PQFAEAFSNRGGIRQHLGNLEGALQDINQALDLNPSLANAYVHRGRIHVDLKNYMKAMAD 388

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + L  +  +A+T   L   S+  ++                             L 
Sbjct: 389 FNKALSLQPD--AAHT---LNERSVLRFR-----------------------------LN 414

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           ++E AL  + + L +  +FS AY  R L+    G    A  DL S + +
Sbjct: 415 DTEGALADVNRALELQPQFSDAYINRSLIRFDRGDRSGAFSDLDSVMSL 463



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 8/168 (4%)

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           FN  +E L    K       AY   G A  ++G Y  A E    AI L  ++  A+ +  
Sbjct: 26  FNTVIESLPNYAK-------AYFNRGCAHYAMGNYAVAIEDFSWAIHLTPDYASAYLNRG 78

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
              + L +++ ALE  ++ + +    ++ Y  RGLL   +G +  A++D    L + P  
Sbjct: 79  NAQRKLGHTDAALEDFERGIQLTPLSTRGYCNRGLLRLEVGNYAGAVRDFDYALRLQPHF 138

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA-FYQ 665
                 R   +   G++++AI D + AL L     + +  + LA FYQ
Sbjct: 139 PRGYLWRGVAWLRCGDFKQAINDLNRALALNPHCAKTYNQRGLAYFYQ 186


>gi|425447925|ref|ZP_18827906.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9443]
 gi|389731403|emb|CCI04529.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9443]
          Length = 991

 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 146/308 (47%), Gaps = 14/308 (4%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG   +  ++ + AISD+++AI  NP+  EA+  RG   + L +   A+ D SKA++  P
Sbjct: 692 RGVLYSDLQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINP 751

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A+    RG+  +  + ++ A+ D    + +++ +  AY   GL    + +Y  A   +
Sbjct: 752 NLAEAYLNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDY 811

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            KAI ++ +  EA+      Y +L   + AL    Q + I+   ++AY  RG+L +   +
Sbjct: 812 DKAIDINHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQK 871

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
           ++ A+ D S  + ++      +       +  G   EA + +  AL +   S E  +   
Sbjct: 872 YELALSDYSKAIELNKDAFIAMTNIGLIKYEQGAINEAAEQFKKALSINNQSAEIQLALA 931

Query: 661 LAFY---QKEIALY---TASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQP 714
           + FY   +K+ AL    +A KI+S+F       +ID L K  W  ++      +K+   P
Sbjct: 932 VVFYHQGEKDKALKLAESALKIDSQFA------NIDFLKKNLWGNKIIAD--AQKLLAHP 983

Query: 715 PLRDSLKK 722
            L++ + +
Sbjct: 984 ELKNYVNQ 991



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 127/264 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   +  KY  AIS + Q +  +P   EA   RG   +  ++ + A+SDF++AI  N
Sbjct: 691 NRGVLYSDLQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDIN 750

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+  RG       +   A+ D  KA++   N A   + RG++ F  + ++ A+ D
Sbjct: 751 PNLAEAYLNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSD 810

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + ++ +   AY   GL   ++ +Y  A   + +AI+++ N  EA+G+    Y +  
Sbjct: 811 YDKAIDINHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQ 870

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E AL    + + ++K    A    GL+ +  G   +A +     L I+  + E     
Sbjct: 871 KYELALSDYSKAIELNKDAFIAMTNIGLIKYEQGAINEAAEQFKKALSINNQSAEIQLAL 930

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
           A  ++  GE  +A+K  ++AL ++
Sbjct: 931 AVVFYHQGEKDKALKLAESALKID 954



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 114/247 (46%), Gaps = 4/247 (1%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E A++   +AI   P+   ++  +      L    E +  +++A+   P +A   + RG+
Sbjct: 636 EQALTVINQAISLFPNNPNSYNEKSSVLNQLNRYDEGLAAITQAINLAPRAA-WYYNRGV 694

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           +    + ++ A+ D S  + ++     AY   G+  S + +Y  A     KAI ++ N  
Sbjct: 695 LYSDLQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINPNLA 754

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           EA+ +   FY +    + AL    + + I++  + AY+ RGLL   L ++  A+ D    
Sbjct: 755 EAYLNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDYDKA 814

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK---EI 668
           + I+    E    R   Y+ + +Y  A+ DY+ A+ +  +  E +  + + +Y +   E+
Sbjct: 815 IDINHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQKYEL 874

Query: 669 ALYTASK 675
           AL   SK
Sbjct: 875 ALSDYSK 881



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 137/303 (45%), Gaps = 14/303 (4%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE---DPMYPEALIGRGTARAFQR 429
           I  + +   D  + RG      G++  AI  FD+ +K+   D +Y  A  G+G A     
Sbjct: 534 IVPNTNAKADIWIQRGGQLWRLGRFEEAIKAFDEAIKQNESDNVY-LAWYGKGLALFALD 592

Query: 430 ELEAAISDFTEAIQSNPSA-------GEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
           + + AI    +AI + P             +R+      L    +A+  +++A+   PN+
Sbjct: 593 KDQPAIEALQQAINTLPKREDLKNFHSSILQRQSVVYRYLENYEQALTVINQAISLFPNN 652

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY-LGLALSSIGEYKKAEEAHL 541
            +  +E+  V  +   ++  +  ++  + L    ++A+ Y  G+  S + +Y  A   + 
Sbjct: 653 PNSYNEKSSVLNQLNRYDEGLAAITQAINLAP--RAAWYYNRGVLYSDLQKYDLAISDYS 710

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +AI ++ N  EA+ +    Y DL   + AL    + + I+   ++AY  RG+  +   ++
Sbjct: 711 QAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINPNLAEAYLNRGVFYYNQQKY 770

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             A+ D    + I+ ++    Y R   Y  + +Y  A+ DYD A+D+  D  E ++ + L
Sbjct: 771 DLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDYDKAIDINHDLAEAYLGRGL 830

Query: 662 AFY 664
            +Y
Sbjct: 831 LYY 833



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 98/207 (47%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG+   N+ KY  A+S +D+ +  +     A   RG      ++ + A+SD+ +AI  
Sbjct: 758 LNRGVFYYNQQKYDLALSDYDKAIDINRNDAVAYYNRGLLYFDLQKYDLALSDYDKAIDI 817

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N    EA+  RG     L +   A+ D ++A+   PN A+    RG++ +  + +  A+ 
Sbjct: 818 NHDLAEAYLGRGLLYYNLQKYDLALADYNQAIRINPNLAEAYGNRGVLYYNQQKYELALS 877

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D S  ++L+K+   A T +GL     G   +A E   KA+ ++    E    L   +   
Sbjct: 878 DYSKAIELNKDAFIAMTNIGLIKYEQGAINEAAEQFKKALSINNQSAEIQLALAVVFYHQ 937

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLR 591
              +KAL+  +  L ID +F+    L+
Sbjct: 938 GEKDKALKLAESALKIDSQFANIDFLK 964



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 117/239 (48%), Gaps = 2/239 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI   +  KY  A+S F + +  +P   EA + RG     Q++ + A+SD+ +AI  N
Sbjct: 725 NRGILYSDLQKYDLALSDFSKAIDINPNLAEAYLNRGVFYYNQQKYDLALSDYDKAIDIN 784

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +   A+  RG     L +   A+ D  KA++   + A+    RG++ +  + ++ A+ D
Sbjct: 785 RNDAVAYYNRGLLYFDLQKYDLALSDYDKAIDINHDLAEAYLGRGLLYYNLQKYDLALAD 844

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++++     AY   G+   +  +Y+ A   + KAI+L+++   A  ++     +  
Sbjct: 845 YNQAIRINPNLAEAYGNRGVLYYNQQKYELALSDYSKAIELNKDAFIAMTNIGLIKYEQG 904

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP--SNIECL 622
              +A E  ++ L I+ + ++      ++ +  G+  KA+K   S L ID   +NI+ L
Sbjct: 905 AINEAAEQFKKALSINNQSAEIQLALAVVFYHQGEKDKALKLAESALKIDSQFANIDFL 963



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 123/317 (38%), Gaps = 55/317 (17%)

Query: 429 RELEAAISDFTEAIQSNPSA-GEAWKRRGQARAALGESVEAIQDLSKALEFE-------- 479
           ++LE  I+  T  I  N +A  + W +RG     LG   EAI+   +A++          
Sbjct: 522 QKLEIFIA-ITGVIVPNTNAKADIWIQRGGQLWRLGRFEEAIKAFDEAIKQNESDNVYLA 580

Query: 480 ----------------------------PNSAD-------ILHERGIVNFKFKDFNAAVE 504
                                       P   D       IL  + +V    +++  A+ 
Sbjct: 581 WYGKGLALFALDKDQPAIEALQQAINTLPKREDLKNFHSSILQRQSVVYRYLENYEQALT 640

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-LTQFYQD 563
            ++  + L   N ++Y      L+ +  Y +   A  +AI L      AW +     Y D
Sbjct: 641 VINQAISLFPNNPNSYNEKSSVLNQLNRYDEGLAAITQAINLAPR--AAWYYNRGVLYSD 698

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   + A+    Q + I+   ++AY+ RG+L   L ++  A+ D S  + I+P+  E   
Sbjct: 699 LQKYDLAISDYSQAIDINPNLAEAYYNRGILYSDLQKYDLALSDFSKAIDINPNLAEAYL 758

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWF 683
            R   Y+   +Y  A+ DYD A+D+  +         +A+Y + +  +   K +     +
Sbjct: 759 NRGVFYYNQQKYDLALSDYDKAIDINRND-------AVAYYNRGLLYFDLQKYDLALSDY 811

Query: 684 DIDGDIDPLFKEYWCKR 700
           D   DI+    E +  R
Sbjct: 812 DKAIDINHDLAEAYLGR 828


>gi|414075696|ref|YP_006995014.1| hypothetical protein ANA_C10400 [Anabaena sp. 90]
 gi|413969112|gb|AFW93201.1| tetratricopeptide repeat-containing protein [Anabaena sp. 90]
          Length = 280

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 6/218 (2%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           + R SK+    V     +G  Q  +G Y +AI+ + + +  +P Y  A  GRG       
Sbjct: 53  IGRTSKAGEFYV-----QGQTQHLKGNYQAAIAAYSKSISLNPQYAPAFKGRGLVYFDTG 107

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
             E AI+D+ +A+  N    EA+  R  A  ++G+   AI D ++A+   P  A++ + R
Sbjct: 108 NKEGAIADYNQALGLNSQDAEAYNNRANAFVSIGDYRRAIADYNQAISIAPKYAEVYNNR 167

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G       D NAA+ED +  ++++KE   AY   G A +S GE +KA   + +A++++ N
Sbjct: 168 GNARANQGDKNAALEDYTQAIRINKEYAVAYNNRGNAYASRGEPQKAISDYNEAVRINPN 227

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYI-DKRFSK 586
           F  A+ +    Y  + +   AL+ LQ+   I DK  +K
Sbjct: 228 FGAAFNNRGNAYAAIGDKRGALKDLQRAAAIFDKEGNK 265



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 5/206 (2%)

Query: 445 NPSAGEAWKR-----RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           NP  G   K      +GQ +   G    AI   SK++   P  A     RG+V F   + 
Sbjct: 50  NPQIGRTSKAGEFYVQGQTQHLKGNYQAAIAAYSKSISLNPQYAPAFKGRGLVYFDTGNK 109

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ D +  + L+ ++  AY     A  SIG+Y++A   + +AI +   + E + +   
Sbjct: 110 EGAIADYNQALGLNSQDAEAYNNRANAFVSIGDYRRAIADYNQAISIAPKYAEVYNNRGN 169

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +  +   ALE   Q + I+K ++ AY+ RG      G+ +KAI D +  + I+P+  
Sbjct: 170 ARANQGDKNAALEDYTQAIRINKEYAVAYNNRGNAYASRGEPQKAISDYNEAVRINPNFG 229

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAA 645
                R + Y AIG+ R A+KD   A
Sbjct: 230 AAFNNRGNAYAAIGDKRGALKDLQRA 255



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/137 (36%), Positives = 70/137 (51%), Gaps = 2/137 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R  A V+ G Y  AI+ ++Q +   P Y E    RG ARA Q +  AA+ D+T+AI+ N
Sbjct: 132 NRANAFVSIGDYRRAIADYNQAISIAPKYAEVYNNRGNARANQGDKNAALEDYTQAIRIN 191

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                A+  RG A A+ GE  +AI D ++A+   PN     + RG       D   A++D
Sbjct: 192 KEYAVAYNNRGNAYASRGEPQKAISDYNEAVRINPNFGAAFNNRGNAYAAIGDKRGALKD 251

Query: 506 LS-ACVKLDKE-NKSAY 520
           L  A    DKE NK  Y
Sbjct: 252 LQRAAAIFDKEGNKDLY 268



 Score = 50.1 bits (118), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 47/84 (55%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N + A+    + + ++ +++ A+  RGL+    G  + AI D +  LG++  + E    
Sbjct: 73  GNYQAAIAAYSKSISLNPQYAPAFKGRGLVYFDTGNKEGAIADYNQALGLNSQDAEAYNN 132

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           RA+ + +IG+YR AI DY+ A+ +
Sbjct: 133 RANAFVSIGDYRRAIADYNQAISI 156



 Score = 47.8 bits (112), Expect = 0.030,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 55/116 (47%)

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G Y+ A  A+ K+I L+  +  A+      Y D  N E A+    Q L ++ + ++AY+ 
Sbjct: 73  GNYQAAIAAYSKSISLNPQYAPAFKGRGLVYFDTGNKEGAIADYNQALGLNSQDAEAYNN 132

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           R      +G +++AI D +  + I P   E    R +     G+   A++DY  A+
Sbjct: 133 RANAFVSIGDYRRAIADYNQAISIAPKYAEVYNNRGNARANQGDKNAALEDYTQAI 188


>gi|298247115|ref|ZP_06970920.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297549774|gb|EFH83640.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 770

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 123/257 (47%), Gaps = 2/257 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG      G    A++ +  ++ +DP Y E  + RG         E A++D+  ++  +
Sbjct: 506 NRGQVYAGIGALEEALADYTAVITQDPYYSEYYLERGNLYRRLGRNEEALADYERSVFYS 565

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA   R    +  G   EA+ D S  LE +P   D L  R  + ++  ++ A+++D
Sbjct: 566 PPYAEAHFNRANVHSLFGHDEEALADYSYVLEIDPTYLDALINRASIFYEQGNYTASLQD 625

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           +   ++ D EN   +  LGL L +  + +KA++A   A+Q D   + AW +      +  
Sbjct: 626 VERGLQQDPENAQLHCTLGLLLMAQEDTEKADQAFSAALQQDPLLVAAWTNRAILAFEEN 685

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE-CLYL 624
             E A++ L Q L +++  +  Y+ RG+      + ++AI D +  L +   + +  LY 
Sbjct: 686 RIEAAIKDLSQALALEENPTVLYN-RGIAYQAQNRWQEAINDFTQALALSNEDAQDILYR 744

Query: 625 RASCYHAIGEYREAIKD 641
           R+ CY  +G+  +A +D
Sbjct: 745 RSFCYTQLGDTNQAQRD 761



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 92/232 (39%), Gaps = 34/232 (14%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L  RG   A    LE A++D+T  I  +P   E +  RG     LG + EA+ D  +++ 
Sbjct: 504 LYNRGQVYAGIGALEEALADYTAVITQDPYYSEYYLERGNLYRRLGRNEEALADYERSVF 563

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
           + P  A+    R  V+  F                D+E  + Y+Y+              
Sbjct: 564 YSPPYAEAHFNRANVHSLFGH--------------DEEALADYSYV-------------- 595

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
                 +++D  +L+A  +    + +  N   +L+ +++ L  D   ++ +   GLLL  
Sbjct: 596 ------LEIDPTYLDALINRASIFYEQGNYTASLQDVERGLQQDPENAQLHCTLGLLLMA 649

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
               +KA +  S+ L  DP  +     RA           AIKD   AL LE
Sbjct: 650 QEDTEKADQAFSAALQQDPLLVAAWTNRAILAFEENRIEAAIKDLSQALALE 701



 Score = 47.4 bits (111), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 1/142 (0%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  ++R      +G Y +++   ++ L++DP   +     G     Q + E A   F+ 
Sbjct: 603 LDALINRASIFYEQGNYTASLQDVERGLQQDPENAQLHCTLGLLLMAQEDTEKADQAFSA 662

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+Q +P    AW  R            AI+DLS+AL  E N   +L+ RGI       + 
Sbjct: 663 ALQQDPLLVAAWTNRAILAFEENRIEAAIKDLSQALALEENPT-VLYNRGIAYQAQNRWQ 721

Query: 501 AAVEDLSACVKLDKENKSAYTY 522
            A+ D +  + L  E+     Y
Sbjct: 722 EAINDFTQALALSNEDAQDILY 743



 Score = 46.6 bits (109), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 10/167 (5%)

Query: 490 GIVNFKFKDFNAAVEDLSACVK-LDKE--------NKSAYTY-LGLALSSIGEYKKAEEA 539
            ++    K+F  A+  ++  +K LD+E        ++S   Y  G   + IG  ++A   
Sbjct: 464 ALIETHLKNFQEALRLVTEGLKRLDEELEPGEHMLHRSVLLYNRGQVYAGIGALEEALAD 523

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
           +   I  D  + E +      Y+ L  +E+AL   ++ ++    +++A+  R  +    G
Sbjct: 524 YTAVITQDPYYSEYYLERGNLYRRLGRNEEALADYERSVFYSPPYAEAHFNRANVHSLFG 583

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
             ++A+ D S  L IDP+ ++ L  RAS ++  G Y  +++D +  L
Sbjct: 584 HDEEALADYSYVLEIDPTYLDALINRASIFYEQGNYTASLQDVERGL 630



 Score = 46.2 bits (108), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           Q Y  +   E+AL     V+  D  +S+ Y  RG L   LG++++A+ D    +   P  
Sbjct: 509 QVYAGIGALEEALADYTAVITQDPYYSEYYLERGNLYRRLGRNEEALADYERSVFYSPPY 568

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTAS 674
            E  + RA+ +   G   EA+ DY   L+++   ++  + +   FY++    YTAS
Sbjct: 569 AEAHFNRANVHSLFGHDEEALADYSYVLEIDPTYLDALINRASIFYEQ--GNYTAS 622


>gi|168704732|ref|ZP_02737009.1| tetratricopeptide repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 607

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 112/262 (42%), Gaps = 34/262 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG      GKY  AI  + + +K DP    A   RGTA        AA+SD TEA++ 
Sbjct: 31  LERGAESFANGKYEDAIRDYTRAIKLDPDSAAAYSARGTAHQANGNDAAALSDLTEALKR 90

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+       RG A A LG   +AI DL+  +E  P+ A   + R +     K F+ A+ 
Sbjct: 91  DPNNATTRYYRGLAYAHLGWPEKAIADLTDFIEMTPDFAPAFYNRALAFEHVKQFDKALA 150

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++LD ++ +A    G A ++ G++                               
Sbjct: 151 DYNEALRLDPKHTNALVGRGTAHATAGQF------------------------------- 179

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              +KAL    + L +D + S A+  R  LL   G+    + DL   + + P   E L  
Sbjct: 180 ---DKALADYNEALRLDPKQSLAFFNRAALLFRQGRWAATLTDLDEAVRLAPEKAEYLLF 236

Query: 625 RASCYHAIGEYREAIKDYDAAL 646
           R++C     E  EA+KD D A+
Sbjct: 237 RSTCRMLRSELDEALKDADQAV 258



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 96/205 (46%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG    A G+  +AI+D ++A++ +P+SA     RG  +    +  AA+ DL+  +K D 
Sbjct: 33  RGAESFANGKYEDAIRDYTRAIKLDPDSAAAYSARGTAHQANGNDAAALSDLTEALKRDP 92

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            N +   Y GLA + +G  +KA       I++  +F  A+ +    ++ +   +KAL   
Sbjct: 93  NNATTRYYRGLAYAHLGWPEKAIADLTDFIEMTPDFAPAFYNRALAFEHVKQFDKALADY 152

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L +D + + A   RG      GQ  KA+ D +  L +DP      + RA+     G 
Sbjct: 153 NEALRLDPKHTNALVGRGTAHATAGQFDKALADYNEALRLDPKQSLAFFNRAALLFRQGR 212

Query: 635 YREAIKDYDAALDLELDSMEKFVLQ 659
           +   + D D A+ L  +  E  + +
Sbjct: 213 WAATLTDLDEAVRLAPEKAEYLLFR 237



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/303 (23%), Positives = 121/303 (39%), Gaps = 40/303 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG A    G++  A++ +++ L+ DP    A   R      Q    A ++D  EA++ 
Sbjct: 167 VGRGTAHATAGQFDKALADYNEALRLDPKQSLAFFNRAALLFRQGRWAATLTDLDEAVRL 226

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   E    R   R    E  EA++D  +A+   P + D    R  V+    +++AA+ 
Sbjct: 227 APEKAEYLLFRSTCRMLRSELDEALKDADQAVRSAPRNPDARVHRSSVHLARSNWDAALR 286

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ-LDR--------------- 548
           DL+  + LD  ++ A+      L+S  E K  + A  +AI+  DR               
Sbjct: 287 DLTEVILLDPNHRFAFLNRAWVLASCPEAKHRDPA--QAIKDADRAGELSGWKNPAAIEA 344

Query: 549 ---------NFLEA--WGHLTQFYQDLANSEKALECLQQVLY---IDKRFSKAYHLRGLL 594
                    +F +A  W +    +        A+   +  LY      RF       G  
Sbjct: 345 RAAAAAESGDFPDAVKWQNKALKHPGYDGPAGAVARARLALYEAGKPYRFQSPTAPNGAA 404

Query: 595 L--------HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           L        H  G+  KA+ D  +   +DP+N    Y R S + A+ +Y  AIKD   ++
Sbjct: 405 LLFERGARWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESI 464

Query: 647 DLE 649
            L+
Sbjct: 465 RLD 467



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 5/130 (3%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG     +G++  A++ +D   + DP        RG+     R+ + AI D TE+I+ 
Sbjct: 407 FERGARWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIRL 466

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-----NFKFKDF 499
           +P+   A+  RG  R  +G    A+ D  +AL  +P  A  L  RG++     +   +D 
Sbjct: 467 DPTFVWAFNDRGAVRFVMGAWGAALGDFDEALRLDPKHATALANRGLLRAAAGDAALRDA 526

Query: 500 NAAVEDLSAC 509
             A+ED  A 
Sbjct: 527 TKALEDAKAA 536



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 67/314 (21%), Positives = 130/314 (41%), Gaps = 39/314 (12%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R+   +S++     +R      +G++A+ ++  D+ ++  P   E L+ R T R  + EL
Sbjct: 191 RLDPKQSLAF---FNRAALLFRQGRWAATLTDLDEAVRLAPEKAEYLLFRSTCRMLRSEL 247

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + A+ D  +A++S P   +A   R     A      A++DL++ +  +PN       R  
Sbjct: 248 DEALKDADQAVRSAPRNPDARVHRSSVHLARSNWDAALRDLTEVILLDPNHRFAFLNRAW 307

Query: 492 V-----NFKFKDFNAAVEDLSACVKLDK-ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           V       K +D   A++D     +L   +N +A      A +  G++  A +   KA++
Sbjct: 308 VLASCPEAKHRDPAQAIKDADRAGELSGWKNPAAIEARAAAAAESGDFPDAVKWQNKALK 367

Query: 546 LD------------RNFLEAWGHLTQFYQDLANS------------------EKALECLQ 575
                         R  L   G   +F    A +                  +KAL    
Sbjct: 368 HPGYDGPAGAVARARLALYEAGKPYRFQSPTAPNGAALLFERGARWHAQGEFDKALTDYD 427

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
               +D   ++ ++ RG +   +  + +AIKDL+  + +DP+ +     R +    +G +
Sbjct: 428 AAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIRLDPTFVWAFNDRGAVRFVMGAW 487

Query: 636 REAIKDYDAALDLE 649
             A+ D+D AL L+
Sbjct: 488 GAALGDFDEALRLD 501



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 58/115 (50%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L  RG     Q E + A++D+  A + +P+    +  RG    A+ +   AI+DL++++ 
Sbjct: 406 LFERGARWHAQGEFDKALTDYDAAARLDPNNARIFYARGSVHLAMRDYDRAIKDLTESIR 465

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            +P      ++RG V F    + AA+ D    ++LD ++ +A    GL  ++ G+
Sbjct: 466 LDPTFVWAFNDRGAVRFVMGAWGAALGDFDEALRLDPKHATALANRGLLRAAAGD 520



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 41/96 (42%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E A+    + + +D   + AY  RG      G    A+ DL+  L  DP+N    Y R  
Sbjct: 44  EDAIRDYTRAIKLDPDSAAAYSARGTAHQANGNDAAALSDLTEALKRDPNNATTRYYRGL 103

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            Y  +G   +AI D    +++  D    F  + LAF
Sbjct: 104 AYAHLGWPEKAIADLTDFIEMTPDFAPAFYNRALAF 139


>gi|148284046|ref|YP_001248136.1| hypothetical protein OTBS_0112 [Orientia tsutsugamushi str.
           Boryong]
 gi|148284371|ref|YP_001248461.1| hypothetical protein OTBS_0632 [Orientia tsutsugamushi str.
           Boryong]
 gi|148284603|ref|YP_001248693.1| hypothetical protein OTBS_1081 [Orientia tsutsugamushi str.
           Boryong]
 gi|148284641|ref|YP_001248731.1| hypothetical protein OTBS_1161 [Orientia tsutsugamushi str.
           Boryong]
 gi|148284656|ref|YP_001248746.1| hypothetical protein OTBS_1187 [Orientia tsutsugamushi str.
           Boryong]
 gi|148285116|ref|YP_001249206.1| hypothetical protein OTBS_2064 [Orientia tsutsugamushi str.
           Boryong]
 gi|146739485|emb|CAM79178.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
           tsutsugamushi str. Boryong]
 gi|146739810|emb|CAM79698.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
           tsutsugamushi str. Boryong]
 gi|146740042|emb|CAM80147.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
           tsutsugamushi str. Boryong]
 gi|146740080|emb|CAM80227.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
           tsutsugamushi str. Boryong]
 gi|146740095|emb|CAM80253.1| tetratricopeptide repeat protein with 5 trp repeats [Orientia
           tsutsugamushi str. Boryong]
 gi|146740555|emb|CAM81159.1| tetratricopeptide repeat proteinFT with 5 trp repeats [Orientia
           tsutsugamushi str. Boryong]
          Length = 220

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 64/213 (30%), Positives = 113/213 (53%), Gaps = 3/213 (1%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K +S + +   ++GIA +N G   +AI  +D  +K  P Y EA I +G   AF  +L+ A
Sbjct: 9   KYRSDNPEAYYNKGIALMNLGYIQNAIENYDIAIKYRPDYAEAYINKGLTLAFLGQLQNA 68

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I  F  AI+ +PS  +++  +G   + L    EAI+  + A++++PN ADI + +G++  
Sbjct: 69  IEHFDLAIKYDPSCVKSYCNKGYILSLLNRYSEAIESCNIAIKYDPNCADIYYNKGMILE 128

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
           K      A+E+    + +  +   A  YL  G++L S+G+Y KA+E    AI+ + N + 
Sbjct: 129 KLGKHQKAIENFDIAIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYNPNIIA 188

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
            +  + +   +L N     E  +Q L I K++S
Sbjct: 189 EYEAMFKKLTELENFTGVKE-YEQKLQILKKYS 220



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 88/180 (48%), Gaps = 2/180 (1%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           +++   A+++  ++ +  + +GI          A+E+    +K   +   AY   GL L+
Sbjct: 1   MENFDIAIKYRSDNPEAYYNKGIALMNLGYIQNAIENYDIAIKYRPDYAEAYINKGLTLA 60

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+ + A E    AI+ D + ++++ +       L    +A+E     +  D   +  Y
Sbjct: 61  FLGQLQNAIEHFDLAIKYDPSCVKSYCNKGYILSLLNRYSEAIESCNIAIKYDPNCADIY 120

Query: 589 HLRGLLLHGLGQHKKAIK--DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           + +G++L  LG+H+KAI+  D++  +   P+  E    +     ++G+Y +A ++++ A+
Sbjct: 121 YNKGMILEKLGKHQKAIENFDIAIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFNLAI 180



 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 74/147 (50%)

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +E+    +K   +N  AY   G+AL ++G  + A E +  AI+   ++ EA+ +      
Sbjct: 1   MENFDIAIKYRSDNPEAYYNKGIALMNLGYIQNAIENYDIAIKYRPDYAEAYINKGLTLA 60

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            L   + A+E     +  D    K+Y  +G +L  L ++ +AI+  +  +  DP+  +  
Sbjct: 61  FLGQLQNAIEHFDLAIKYDPSCVKSYCNKGYILSLLNRYSEAIESCNIAIKYDPNCADIY 120

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLE 649
           Y +      +G++++AI+++D A+ ++
Sbjct: 121 YNKGMILEKLGKHQKAIENFDIAIAIK 147


>gi|220907546|ref|YP_002482857.1| hypothetical protein Cyan7425_2135 [Cyanothece sp. PCC 7425]
 gi|219864157|gb|ACL44496.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
          Length = 373

 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 6/284 (2%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           SK IS +    +  A+     Y  AI+  DQ ++ +P Y EA + RG+ +      + AI
Sbjct: 46  SKQISAEEFFGQAKAKYAREDYQGAIAAVDQAIRLNPNYAEAYLMRGSIQTELGNYQEAI 105

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           +D  + I+ NP+   A+  RG  +   G    A+ D ++ +   PN A+    RG +  +
Sbjct: 106 ADLDQGIKLNPNNASAYFIRGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQ 165

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW- 554
             +   A+ D +  +KL+     AY   G   + +G Y++A     + I+L  N   A+ 
Sbjct: 166 LDNLQGAIADFNRGIKLNPNEAKAYFIRGTIQAGLGNYQEAIADFGQEIRLSPNDPLAYH 225

Query: 555 --GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
             G L  +  DL   + A+    QV+ +      AY+ RG      G  + AI D +  +
Sbjct: 226 RRGDLRAYTGDL---QGAIADYDQVIRLSPNCHCAYYDRGFARAQSGDLQGAIADYNQAI 282

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            ++P        R + +  +G  + AI DY+ A+ L  +  E +
Sbjct: 283 KLNPEFATVYVARGNAHDELGNRQAAIADYNQAIKLNPELAEAY 326



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 100/221 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG  Q+  G    A++ ++Q+++  P    A   RG  +     L+ AI+DF   I+ NP
Sbjct: 125 RGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQLDNLQGAIADFNRGIKLNP 184

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  +A+  RG  +A LG   EAI D  + +   PN     H RG +     D   A+ D 
Sbjct: 185 NEAKAYFIRGTIQAGLGNYQEAIADFGQEIRLSPNDPLAYHRRGDLRAYTGDLQGAIADY 244

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L      AY   G A +  G+ + A   + +AI+L+  F   +      + +L N
Sbjct: 245 DQVIRLSPNCHCAYYDRGFARAQSGDLQGAIADYNQAIKLNPEFATVYVARGNAHDELGN 304

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            + A+    Q + ++   ++AY+ RG      G  + AI D
Sbjct: 305 RQAAIADYNQAIKLNPELAEAYYSRGGNRRHSGDKQGAIAD 345



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 8/273 (2%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E   G+  A+  + + + AI+   +AI+ NP+  EA+  RG  +  LG   EAI DL + 
Sbjct: 52  EEFFGQAKAKYAREDYQGAIAAVDQAIRLNPNYAEAYLMRGSIQTELGNYQEAIADLDQG 111

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           ++  PN+A     RG +  +  +   A+ D +  ++L     +AY   G     +   + 
Sbjct: 112 IKLNPNNASAYFIRGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQLQLDNLQG 171

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A     + I+L+ N  +A+         L N ++A+    Q + +      AYH RG L 
Sbjct: 172 AIADFNRGIKLNPNEAKAYFIRGTIQAGLGNYQEAIADFGQEIRLSPNDPLAYHRRGDLR 231

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDYDAALDLELDSME 654
              G  + AI D    + + P N  C Y  R       G+ + AI DY+ A+ L  +   
Sbjct: 232 AYTGDLQGAIADYDQVIRLSP-NCHCAYYDRGFARAQSGDLQGAIADYNQAIKLNPEFAT 290

Query: 655 KFVLQC-----LAFYQKEIALYT-ASKINSEFC 681
            +V +      L   Q  IA Y  A K+N E  
Sbjct: 291 VYVARGNAHDELGNRQAAIADYNQAIKLNPELA 323



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 13/182 (7%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG  Q   G Y  AI+ F Q ++  P  P A   RG  RA+  +L+ AI+D+ + I+ +P
Sbjct: 193 RGTIQAGLGNYQEAIADFGQEIRLSPNDPLAYHRRGDLRAYTGDLQGAIADYDQVIRLSP 252

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   A+  RG ARA  G+   AI D ++A++  P  A +   RG  + +  +  AA+ D 
Sbjct: 253 NCHCAYYDRGFARAQSGDLQGAIADYNQAIKLNPEFATVYVARGNAHDELGNRQAAIADY 312

Query: 507 SACVKLDKENKSAY-------TYLGLALSSIGEYKKAEEAHLKAIQLDRNF----LEAWG 555
           +  +KL+ E   AY        + G    +I +Y+KA E  L  IQ D++      +A G
Sbjct: 313 NQAIKLNPELAEAYYSRGGNRRHSGDKQGAIADYQKAAE--LAQIQGDKDLHTLTTQALG 370

Query: 556 HL 557
            L
Sbjct: 371 EL 372


>gi|408527323|emb|CCK25497.1| hypothetical protein BN159_1118 [Streptomyces davawensis JCM 4913]
          Length = 1064

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 123/266 (46%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           R  RG   +  G+   A++ F   L+ DP     L  R  A    R  + A++DFT A+ 
Sbjct: 581 RADRGGGHLRAGRRDEAVADFTAALELDPDRASVLAQRAEAHRQSRRYDDAVADFTAALD 640

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            +         RGQA    G   +A+ DL+ AL+  P  A  L +RG  + + + ++ AV
Sbjct: 641 RHHDRVYVLSSRGQAHRQAGRYDDAVTDLTAALDLRPEYAWALAQRGEAHREAERYDEAV 700

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D +A +  D +   A +  G A    G + +A      A++LD  +  A     + +++
Sbjct: 701 TDFTAALGHDPDFAWALSSRGAAHRQAGRHDEAIADQTAALRLDSAYFWALAERGEVHRE 760

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
               ++A+  L   L +  R++ A   RG   HG G++ +A+ DL++ L +D +      
Sbjct: 761 AGRYDEAVADLTAALALSPRYAWALGSRGQAHHGAGRYDEAVADLTAALELDATLDWARS 820

Query: 624 LRASCYHAIGEYREAIKDYDAALDLE 649
            R   ++  G  +EA++D    ++L+
Sbjct: 821 HRVEAHYLAGRSQEALEDLSTVMELQ 846



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 116/271 (42%), Gaps = 3/271 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG A    G+Y  A++     L   P Y  AL  RG A       + A++DFT A+  +
Sbjct: 651 SRGQAHRQAGRYDDAVTDLTAALDLRPEYAWALAQRGEAHREAERYDEAVTDFTAALGHD 710

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A   RG A    G   EAI D + AL  +      L ERG V+ +   ++ AV D
Sbjct: 711 PDFAWALSSRGAAHRQAGRHDEAIADQTAALRLDSAYFWALAERGEVHREAGRYDEAVAD 770

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L+A + L      A    G A    G Y +A      A++LD     A  H  + +    
Sbjct: 771 LTAALALSPRYAWALGSRGQAHHGAGRYDEAVADLTAALELDATLDWARSHRVEAHYLAG 830

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL- 624
            S++ALE L  V+ +         +RG +    G + +A  D +S L   P +   L++ 
Sbjct: 831 RSQEALEDLSTVMELQPSSPWPLAVRGFMHRMNGDYAQAAADYASALERAPDDRARLWVV 890

Query: 625 --RASCYHAIGEYREAIKDYDAALDLELDSM 653
             R   +   G   +A++D+   LDL  D +
Sbjct: 891 RDRGEFHRQTGRLAQAVEDFTTCLDLNPDDV 921



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 4/219 (1%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E  ++D   A+   P    A   RG      G   EA+ D + ALE +P+ A +L +R  
Sbjct: 561 EEGMADLERAVALAPDDARARADRGGGHLRAGRRDEAVADFTAALELDPDRASVLAQRAE 620

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTY--LGLALSSIGEYKKAEEAHLKAIQLDRN 549
            + + + ++ AV D +A   LD+ +   Y     G A    G Y  A      A+ L   
Sbjct: 621 AHRQSRRYDDAVADFTAA--LDRHHDRVYVLSSRGQAHRQAGRYDDAVTDLTAALDLRPE 678

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           +  A     + +++    ++A+      L  D  F+ A   RG      G+H +AI D +
Sbjct: 679 YAWALAQRGEAHREAERYDEAVTDFTAALGHDPDFAWALSSRGAAHRQAGRHDEAIADQT 738

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + L +D +    L  R   +   G Y EA+ D  AAL L
Sbjct: 739 AALRLDSAYFWALAERGEVHREAGRYDEAVADLTAALAL 777



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 78/377 (20%), Positives = 144/377 (38%), Gaps = 42/377 (11%)

Query: 289 DKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTNSESYSKSSISDNKSSDSTESRSKL 348
           D+   + R GR+     D    L  D    +     +E++ +S   D+  +D T +  + 
Sbjct: 583 DRGGGHLRAGRRDEAVADFTAALELDPDRASVLAQRAEAHRQSRRYDDAVADFTAALDRH 642

Query: 349 SFKWDMLKETSNEAKRNKKF--CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISI 403
             +  +L       ++  ++   VT ++ +  +  ++  +   RG A     +Y  A++ 
Sbjct: 643 HDRVYVLSSRGQAHRQAGRYDDAVTDLTAALDLRPEYAWALAQRGEAHREAERYDEAVTD 702

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           F   L  DP +  AL  RG A       + AI+D T A++ + +   A   RG+     G
Sbjct: 703 FTAALGHDPDFAWALSSRGAAHRQAGRHDEAIADQTAALRLDSAYFWALAERGEVHREAG 762

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
              EA+ DL+ AL   P  A  L  RG  +     ++ AV DL+A ++LD     A ++ 
Sbjct: 763 RYDEAVADLTAALALSPRYAWALGSRGQAHHGAGRYDEAVADLTAALELDATLDWARSHR 822

Query: 524 GLALSSIGEYKKAEEAHLKAIQL------------------------------------- 546
             A    G  ++A E     ++L                                     
Sbjct: 823 VEAHYLAGRSQEALEDLSTVMELQPSSPWPLAVRGFMHRMNGDYAQAAADYASALERAPD 882

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           DR  L       +F++      +A+E     L ++     +  LRG+     G+  +A +
Sbjct: 883 DRARLWVVRDRGEFHRQTGRLAQAVEDFTTCLDLNPDDVWSRKLRGISHRQAGRSTEARE 942

Query: 607 DLSSGLGIDPSNIECLY 623
           DL+  L   P + +  +
Sbjct: 943 DLTQALAASPGSPDVTF 959



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 76/187 (40%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G   E + DL +A+   P+ A    +RG  + +    + AV D +A ++LD +  S    
Sbjct: 558 GRDEEGMADLERAVALAPDDARARADRGGGHLRAGRRDEAVADFTAALELDPDRASVLAQ 617

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
              A      Y  A      A+    + +       Q ++     + A+  L   L +  
Sbjct: 618 RAEAHRQSRRYDDAVADFTAALDRHHDRVYVLSSRGQAHRQAGRYDDAVTDLTAALDLRP 677

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
            ++ A   RG       ++ +A+ D ++ LG DP     L  R + +   G + EAI D 
Sbjct: 678 EYAWALAQRGEAHREAERYDEAVTDFTAALGHDPDFAWALSSRGAAHRQAGRHDEAIADQ 737

Query: 643 DAALDLE 649
            AAL L+
Sbjct: 738 TAALRLD 744


>gi|402771088|ref|YP_006590625.1| hypothetical protein BN69_0523 [Methylocystis sp. SC2]
 gi|401773108|emb|CCJ05974.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
           sp. SC2]
          Length = 291

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 63/212 (29%), Positives = 97/212 (45%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           +T + +    S +   +RG+A    G++  A++ F Q +K +P    A   R  A     
Sbjct: 67  LTEVIRRNPSSAEAYDTRGVAYARVGRFQEAVADFTQAIKLEPNNSAAYTNRALALRQMG 126

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + +AA +DF  AI+ NP    A+  R     A G   +A+ DL +A+   P SA   H R
Sbjct: 127 QSDAARADFDRAIEVNPKHAPAYVGRANLLRAQGNLDQALADLDQAIRLNPESAQAFHAR 186

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+++ K  D   AV D    +  D    + Y   G +L ++G+Y KA E    A+ +D  
Sbjct: 187 GLIHQKRGDDARAVTDFDNAIDRDPFAAAPYLARGESLVTLGKYDKAVEDFNAALNVDSK 246

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
              AW  L   Y    N  KA E  Q+ L +D
Sbjct: 247 SALAWAWLGVAYDKSGNRSKARESFQRALTLD 278



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 62/236 (26%), Positives = 106/236 (44%), Gaps = 37/236 (15%)

Query: 420 GRGTARAFQRELEAA---ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           GRG A     +  +A   I+  TE I+ NPS+ EA+  RG A A +G   EA+ D ++A+
Sbjct: 46  GRGIAEIADTDPNSASVNINSLTEVIRRNPSSAEAYDTRGVAYARVGRFQEAVADFTQAI 105

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           + EPN                                  N +AYT   LAL  +G+   A
Sbjct: 106 KLEPN----------------------------------NSAAYTNRALALRQMGQSDAA 131

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
                +AI+++     A+       +   N ++AL  L Q + ++   ++A+H RGL+  
Sbjct: 132 RADFDRAIEVNPKHAPAYVGRANLLRAQGNLDQALADLDQAIRLNPESAQAFHARGLIHQ 191

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
             G   +A+ D  + +  DP        R      +G+Y +A++D++AAL+++  S
Sbjct: 192 KRGDDARAVTDFDNAIDRDPFAAAPYLARGESLVTLGKYDKAVEDFNAALNVDSKS 247



 Score = 43.1 bits (100), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 41/95 (43%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+     G  A A++ FD  +  DP      + RG +     + + A+ DF  A+  +
Sbjct: 185 ARGLIHQKRGDDARAVTDFDNAIDRDPFAAAPYLARGESLVTLGKYDKAVEDFNAALNVD 244

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
             +  AW   G A    G   +A +   +AL  +P
Sbjct: 245 SKSALAWAWLGVAYDKSGNRSKARESFQRALTLDP 279



 Score = 41.6 bits (96), Expect = 2.1,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 37/171 (21%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKS---AYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           RGI      D N+A  ++++  ++ + N S   AY   G+A + +G +++A     +AI+
Sbjct: 47  RGIAEIADTDPNSASVNINSLTEVIRRNPSSAEAYDTRGVAYARVGRFQEAVADFTQAIK 106

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           L+ N                                   S AY  R L L  +GQ   A 
Sbjct: 107 LEPNN----------------------------------SAAYTNRALALRQMGQSDAAR 132

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            D    + ++P +      RA+   A G   +A+ D D A+ L  +S + F
Sbjct: 133 ADFDRAIEVNPKHAPAYVGRANLLRAQGNLDQALADLDQAIRLNPESAQAF 183


>gi|409407329|ref|ZP_11255780.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
 gi|386433080|gb|EIJ45906.1| TPR repeat-containing protein [Herbaspirillum sp. GW103]
          Length = 603

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 127/268 (47%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L + +A   +G+ A A  ++ ++L + P + EA    G  +  Q E EAA +   +AI+ 
Sbjct: 12  LQKALALHQKGQLAPAEDLYKKVLAKLPRHFEANYLYGMLKLHQEEWEAAEAQLAKAIEL 71

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   + +     A   LG   EA++  ++ L   P  AD L  RG    +      A+E
Sbjct: 72  NPDHPDTYFDHAGALVHLGRDAEAVERYNQILAQNPAFADALLARGAALRRLDLNREALE 131

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           DL   V+L  ++  A+  LG     +  Y+ A  ++ +A+ L  +F+EAW +L    +D 
Sbjct: 132 DLQQAVRLVPDHADAWFQLGNLQHELYSYRDARASYERAVALRPDFIEAWFNLGNACKDS 191

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+AL    + L +   F +A   RG +L  + + ++A++     L +  S+ +  + 
Sbjct: 192 YQFEEALRAFDRALAVQPDFFEAQSNRGFVLFKMQRPEEALEAYDRALALSDSSPDLWFN 251

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDS 652
           RAS    +  + EA + Y  A +L  +S
Sbjct: 252 RASTLEQLSRFSEASQSYQRARELSPES 279



 Score = 47.0 bits (110), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 11/173 (6%)

Query: 486 LHERGIVNFKFKDFNAAVEDL--SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
           LH++G +        A  EDL      KL +  ++ Y Y  L L    E++ AE    KA
Sbjct: 18  LHQKGQL--------APAEDLYKKVLAKLPRHFEANYLYGMLKLHQ-EEWEAAEAQLAKA 68

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
           I+L+ +  + +         L    +A+E   Q+L  +  F+ A   RG  L  L  +++
Sbjct: 69  IELNPDHPDTYFDHAGALVHLGRDAEAVERYNQILAQNPAFADALLARGAALRRLDLNRE 128

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           A++DL   + + P + +  +   +  H +  YR+A   Y+ A+ L  D +E +
Sbjct: 129 ALEDLQQAVRLVPDHADAWFQLGNLQHELYSYRDARASYERAVALRPDFIEAW 181


>gi|428305620|ref|YP_007142445.1| hypothetical protein Cri9333_2057 [Crinalium epipsammum PCC 9333]
 gi|428247155|gb|AFZ12935.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 343

 Score = 93.6 bits (231), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 108/232 (46%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L  RG ++    +   AI+D T AI+ + +  EA+  RG AR  LG+   AI D + ++ 
Sbjct: 57  LFNRGVSKYSNADYNGAIADLTAAIRLDSTLAEAYYNRGLARRQLGDFTGAIADYTNSIR 116

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
            +P+       RGI       +  A+ D +A V LD ++ +AY    +A  ++G+   A 
Sbjct: 117 IDPSYISPYINRGIAYAAQGKYTEAMADYTAAVNLDAKDAAAYFNRAIAYDALGDRAAAI 176

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           + + + I L   ++ A+ +      D  + + A+     VL +D +    Y  RG+    
Sbjct: 177 KDYTQTISLQPKYITAYLNRGISRTDSGDYKSAIADFNTVLKLDPQLVAGYENRGIARRF 236

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           LG  K AI D +  + + P+N    Y R    +  G  + AI DY  A+ ++
Sbjct: 237 LGDLKGAIADYNRAIQLSPNNASAYYNRGLVSYRQGNKQAAIDDYTQAIRVD 288



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 34/261 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+++ +   Y  AI+     ++ D    EA   RG AR    +   AI+D+T +I+ 
Sbjct: 58  FNRGVSKYSNADYNGAIADLTAAIRLDSTLAEAYYNRGLARRQLGDFTGAIADYTNSIRI 117

Query: 445 NPSAGEAWKRRGQARA----------------------------------ALGESVEAIQ 470
           +PS    +  RG A A                                  ALG+   AI+
Sbjct: 118 DPSYISPYINRGIAYAAQGKYTEAMADYTAAVNLDAKDAAAYFNRAIAYDALGDRAAAIK 177

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++ +  +P        RGI      D+ +A+ D +  +KLD +  + Y   G+A   +
Sbjct: 178 DYTQTISLQPKYITAYLNRGISRTDSGDYKSAIADFNTVLKLDPQLVAGYENRGIARRFL 237

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G+ K A   + +AIQL  N   A+ +         N + A++   Q + +D RF++AY  
Sbjct: 238 GDLKGAIADYNRAIQLSPNNASAYYNRGLVSYRQGNKQAAIDDYTQAIRVDSRFARAYGN 297

Query: 591 RGLLLHGLGQHKKAIKDLSSG 611
           RGLL + LG  + A+ D+ + 
Sbjct: 298 RGLLRYELGSREAALDDVRTA 318



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 6/232 (2%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG ++ +  +   AI DL+ A+  +   A+  + RG+   +  DF  A+ D +  +++D 
Sbjct: 60  RGVSKYSNADYNGAIADLTAAIRLDSTLAEAYYNRGLARRQLGDFTGAIADYTNSIRIDP 119

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
              S Y   G+A ++ G+Y +A   +  A+ LD     A+ +    Y  L +   A++  
Sbjct: 120 SYISPYINRGIAYAAQGKYTEAMADYTAAVNLDAKDAAAYFNRAIAYDALGDRAAAIKDY 179

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + +  ++  AY  RG+     G +K AI D ++ L +DP  +     R      +G+
Sbjct: 180 TQTISLQPKYITAYLNRGISRTDSGDYKSAIADFNTVLKLDPQLVAGYENRGIARRFLGD 239

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFY-----QKEIALYT-ASKINSEF 680
            + AI DY+ A+ L  ++   +  + L  Y     Q  I  YT A +++S F
Sbjct: 240 LKGAIADYNRAIQLSPNNASAYYNRGLVSYRQGNKQAAIDDYTQAIRVDSRF 291



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/128 (32%), Positives = 68/128 (53%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RGI++ + G Y SAI+ F+ +LK DP        RG AR F  +L+ AI+D+  AIQ 
Sbjct: 194 LNRGISRTDSGDYKSAIADFNTVLKLDPQLVAGYENRGIARRFLGDLKGAIADYNRAIQL 253

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+   A+  RG      G    AI D ++A+  +   A     RG++ ++     AA++
Sbjct: 254 SPNNASAYYNRGLVSYRQGNKQAAIDDYTQAIRVDSRFARAYGNRGLLRYELGSREAALD 313

Query: 505 DLSACVKL 512
           D+    +L
Sbjct: 314 DVRTAARL 321


>gi|298244298|ref|ZP_06968104.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
           44963]
 gi|297551779|gb|EFH85644.1| Tetratricopeptide TPR_2 repeat protein [Ktedonobacter racemifer DSM
           44963]
          Length = 517

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 137/276 (49%), Gaps = 21/276 (7%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G +  A+  +D+ ++ DP    A   RG   A +++   A S++++AI+ +PS  + +  
Sbjct: 44  GDFQQALVNYDKAIELDPSLAMAYHLRGKIYAKRKDFLQAFSNYSQAIKLDPSCADFYYY 103

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A A +G   +A+++ +KA+E +P+ A     RGI  F+  +   A+ + +  ++LD 
Sbjct: 104 QGNAYALIGYPRQAVRNYNKAIELDPSDAIYYCNRGIAYFELNELKQALTNCNKAIELDP 163

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR----------------NFLE-----A 553
               AY   G   + +G+ ++    + +AI+LD                 +F+E      
Sbjct: 164 SLAMAYHLRGKIYTKLGDSQQGLLNYNQAIKLDPSLEKTSSKPAETEGSDSFVEDSFSIN 223

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           + ++   Y +  + +KAL   ++ + +D   S AY+  GL    LG  + AI +    + 
Sbjct: 224 YVNIGIDYAEAGDIQKALSNFKKAIELDPSDSIAYYNCGLAYEKLGDLQLAIVNYGRSIE 283

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           ++PS    +Y  A  Y  IG+Y++A+  Y+ A++L+
Sbjct: 284 LNPSYFWAIYKLADAYQEIGDYQQALISYNQAINLK 319



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 1/272 (0%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S S+++ ++ GI     G    A+S F + ++ DP    A    G A     +L+ AI +
Sbjct: 219 SFSINY-VNIGIDYAEAGDIQKALSNFKKAIELDPSDSIAYYNCGLAYEKLGDLQLAIVN 277

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           +  +I+ NPS   A  +   A   +G+  +A+   ++A+  +P  A+I + RG+   K  
Sbjct: 278 YGRSIELNPSYFWAIYKLADAYQEIGDYQQALISYNQAINLKPLKAEIYNNRGVAYEKLG 337

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           D+  A+ +    ++L+     A   L +A   IG++++A  ++ +AI+L+    + + + 
Sbjct: 338 DWQLAIVNYRQSIELNPSYFRAIYNLAVAYQEIGDFEQALISYNQAIKLEPLKADIYNNR 397

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              Y  L    +A+    Q + ++      Y  RG     LG  ++AI+D S  + +DPS
Sbjct: 398 GNVYHKLGIVYQAIVDYSQSIKLNPSHPITYFNRGGSHAKLGNIEQAIEDYSRAIELDPS 457

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
                + RA  Y AIGE ++AI DYD A  L+
Sbjct: 458 FANAYFSRAQIYDAIGELQQAIGDYDKAFKLK 489



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 14/194 (7%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            E AI  + +AI+ +P+   A+  R  +   LG+  +A+ +  KA+E +P+ A   H RG
Sbjct: 12  FEQAILYYDKAIELDPAHIFAYFNRALSYDLLGDFQQALVNYDKAIELDPSLAMAYHLRG 71

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-- 548
            +  K KDF  A  + S  +KLD      Y Y G A + IG  ++A   + KAI+LD   
Sbjct: 72  KIYAKRKDFLQAFSNYSQAIKLDPSCADFYYYQGNAYALIGYPRQAVRNYNKAIELDPSD 131

Query: 549 -----NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
                N   A+  L +  Q L N  KA+E       +D   + AYHLRG +   LG  ++
Sbjct: 132 AIYYCNRGIAYFELNELKQALTNCNKAIE-------LDPSLAMAYHLRGKIYTKLGDSQQ 184

Query: 604 AIKDLSSGLGIDPS 617
            + + +  + +DPS
Sbjct: 185 GLLNYNQAIKLDPS 198



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 141/342 (41%), Gaps = 60/342 (17%)

Query: 368 FCVTRISKSKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
           F    ++  K+I +D  L+     RG        +  A S + Q +K DP   +    +G
Sbjct: 46  FQQALVNYDKAIELDPSLAMAYHLRGKIYAKRKDFLQAFSNYSQAIKLDPSCADFYYYQG 105

Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
            A A       A+ ++ +AI+ +PS    +  RG A   L E  +A+ + +KA+E +P+ 
Sbjct: 106 NAYALIGYPRQAVRNYNKAIELDPSDAIYYCNRGIAYFELNELKQALTNCNKAIELDPSL 165

Query: 483 ADILHERGIVNFKFKD-------FNAAVE------------------------------- 504
           A   H RG +  K  D       +N A++                               
Sbjct: 166 AMAYHLRGKIYTKLGDSQQGLLNYNQAIKLDPSLEKTSSKPAETEGSDSFVEDSFSINYV 225

Query: 505 -----------------DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
                            +    ++LD  +  AY   GLA   +G+ + A   + ++I+L+
Sbjct: 226 NIGIDYAEAGDIQKALSNFKKAIELDPSDSIAYYNCGLAYEKLGDLQLAIVNYGRSIELN 285

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            ++  A   L   YQ++ + ++AL    Q + +    ++ Y+ RG+    LG  + AI +
Sbjct: 286 PSYFWAIYKLADAYQEIGDYQQALISYNQAINLKPLKAEIYNNRGVAYEKLGDWQLAIVN 345

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
               + ++PS    +Y  A  Y  IG++ +A+  Y+ A+ LE
Sbjct: 346 YRQSIELNPSYFRAIYNLAVAYQEIGDFEQALISYNQAIKLE 387



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 114/519 (21%), Positives = 198/519 (38%), Gaps = 86/519 (16%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLC-----SLRNWSKAIRILDSLLAQS 66
           +L+   + I   D+ + +D     A   R     L      +L N+ KAI  LD  LA +
Sbjct: 8   KLSNFEQAILYYDKAIELDPAHIFAYFNRALSYDLLGDFQQALVNYDKAIE-LDPSLAMA 66

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
           Y +     R   Y++ +       +  +A++LDP+    Y  +G A++ +G   +A+  +
Sbjct: 67  YHL-----RGKIYAKRKDFLQAFSNYSQAIKLDPSCADFYYYQGNAYALIGYPRQAVRNY 121

Query: 127 EKGYE----HALHQSADLKQFLELEEL---LT----AAKQDRSVTCEYDVSNSM-SSLTV 174
            K  E     A++       + EL EL   LT    A + D S+   Y +   + + L  
Sbjct: 122 NKAIELDPSDAIYYCNRGIAYFELNELKQALTNCNKAIELDPSLAMAYHLRGKIYTKLGD 181

Query: 175 SESGLNANDKMSETSENHNKSDICDSSSQSRDVSETCSKSSHDPDLCNGRSDEAKGGSSV 234
           S+ GL           N+N++   D S           K+S  P    G     +   S+
Sbjct: 182 SQQGL----------LNYNQAIKLDPS---------LEKTSSKPAETEGSDSFVEDSFSI 222

Query: 235 PVSKSGLHINGKLREVSENHNGSSDGSKSTHASRDASEINRQSSDDFDICN------GPI 288
                G+           ++  + D  K+    + A E++   S  +  C       G +
Sbjct: 223 NYVNIGI-----------DYAEAGDIQKALSNFKKAIELDPSDSIAYYNCGLAYEKLGDL 271

Query: 289 DKASVNERHGRQTNGTH---------------DVHDKLSSDSASLNDSNTNSESYSKSSI 333
             A VN     + N ++               D    L S + ++N     +E Y+   +
Sbjct: 272 QLAIVNYGRSIELNPSYFWAIYKLADAYQEIGDYQQALISYNQAINLKPLKAEIYNNRGV 331

Query: 334 SDNKSSD----STESRSKLSFKWDMLKETSNEAKRNKK---FCVTRISKSKSISV----- 381
           +  K  D        R  +       +   N A   ++   F    IS +++I +     
Sbjct: 332 AYEKLGDWQLAIVNYRQSIELNPSYFRAIYNLAVAYQEIGDFEQALISYNQAIKLEPLKA 391

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG      G    AI  + Q +K +P +P     RG + A    +E AI D++ A
Sbjct: 392 DIYNNRGNVYHKLGIVYQAIVDYSQSIKLNPSHPITYFNRGGSHAKLGNIEQAIEDYSRA 451

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           I+ +PS   A+  R Q   A+GE  +AI D  KA + +P
Sbjct: 452 IELDPSFANAYFSRAQIYDAIGELQQAIGDYDKAFKLKP 490



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 81/178 (45%)

Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
           K +  +   +RG+A    G +  AI  + Q ++ +P Y  A+     A     + E A+ 
Sbjct: 319 KPLKAEIYNNRGVAYEKLGDWQLAIVNYRQSIELNPSYFRAIYNLAVAYQEIGDFEQALI 378

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
            + +AI+  P   + +  RG     LG   +AI D S++++  P+       RG  + K 
Sbjct: 379 SYNQAIKLEPLKADIYNNRGNVYHKLGIVYQAIVDYSQSIKLNPSHPITYFNRGGSHAKL 438

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
            +   A+ED S  ++LD    +AY        +IGE ++A   + KA +L  + +  +
Sbjct: 439 GNIEQAIEDYSRAIELDPSFANAYFSRAQIYDAIGELQQAIGDYDKAFKLKPSLVTTY 496



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 58/108 (53%)

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KAI+LD   + A+ +    Y  L + ++AL    + + +D   + AYHLRG +       
Sbjct: 21  KAIELDPAHIFAYFNRALSYDLLGDFQQALVNYDKAIELDPSLAMAYHLRGKIYAKRKDF 80

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            +A  + S  + +DPS  +  Y + + Y  IG  R+A+++Y+ A++L+
Sbjct: 81  LQAFSNYSQAIKLDPSCADFYYYQGNAYALIGYPRQAVRNYNKAIELD 128


>gi|70607745|ref|YP_256615.1| hypothetical protein Saci_2026 [Sulfolobus acidocaldarius DSM 639]
 gi|68568393|gb|AAY81322.1| conserved TPR domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 399

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 141/280 (50%), Gaps = 15/280 (5%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE----------ALIGRGTARAFQREL- 431
           +  +RG+A  N   Y+ AI  FD+ ++ +P + +          AL   G+  A   +L 
Sbjct: 26  YHFNRGLAYFNLNNYSEAIREFDEAIRLNPFHADSHYYKALSLIALQRSGSVNAGISDLY 85

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI +F EAI+ +P   E   ++G A   LG   EA+ +   A++  P + +  + + I
Sbjct: 86  ERAILEFDEAIKIDPKNPEYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAI 145

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           +    + +  A+ ++   ++L+ +N + Y    L L S+G+ K+A +   KAI L+    
Sbjct: 146 ILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVA 205

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR-GLLLHGLGQHKKAIKDLSS 610
           E +       ++L   +  L+     + +    +  YH R G+L + LG+++KA+ +L  
Sbjct: 206 EYYHQKGLILKELKRYDDVLKDYDNAIKLSPN-NPEYHFRKGVLYYELGKYEKAVMELEE 264

Query: 611 GLGIDPSNIECLY-LRASCYHAIGEYREAIKDYDAALDLE 649
            + ++P+N E  Y L  + +H +  Y +A++++D A+ L+
Sbjct: 265 SVRLNPNNPEYHYQLGLALFHVMM-YEDAVEEFDKAVKLD 303



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 129/273 (47%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           ++   +G+A    G+   A+  +   +K +P  PE    +      Q +   AI++   A
Sbjct: 104 EYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAIILQDQEKYVDAIAEVDTA 163

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP     + R+     ++G+  EA+  L KA+   P  A+  H++G++  + K ++ 
Sbjct: 164 IRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVAEYYHQKGLILKELKRYDD 223

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            ++D    +KL   N   +   G+    +G+Y+KA     ++++L+ N  E    L    
Sbjct: 224 VLKDYDNAIKLSPNNPEYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHYQLGLAL 283

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             +   E A+E   + + +D +  + Y+ +G  L  L ++ KAIK+    + ++P++   
Sbjct: 284 FHVMMYEDAVEEFDKAVKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKAISLNPNDPLP 343

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
            Y +      +G+Y EAI + D A+ L  D+ +
Sbjct: 344 HYQKGVVLKTLGKYEEAIVELDEAIKLNPDNQQ 376


>gi|427737000|ref|YP_007056544.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
 gi|427372041|gb|AFY55997.1| serine/threonine protein kinase [Rivularia sp. PCC 7116]
          Length = 722

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 115/251 (45%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+  + Q ++  P Y +A  G+G         + A+S + +AI+  P+  E+W+ R
Sbjct: 355 RYEDALDNYKQAIEIKPEYAQAWNGQGRVLYELNSHKEALSAYDKAIEIEPNYQESWRGR 414

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L    EAI    KAL+ +P S  +L+ RG      K ++ A++     V+L  E
Sbjct: 415 GFVLNKLKRYQEAIYSFDKALKLKPESPKVLNARGEALRNLKRYDEAIQSYDKAVELQPE 474

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              A+      L ++  YK A   + + I+L  N   AW +      +L     AL+   
Sbjct: 475 YDQAWYNKAWVLYNLKRYKDALATYEQVIRLKPNNELAWYNSGNALVNLNRQRDALKAYS 534

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + +     F +A+  RG +L  L ++ +A++     L   P+N + LY +    H +  Y
Sbjct: 535 KAVQYKPSFYQAWLSRGNILITLRRYPEAVESFQEVLKYQPNNFDALYSKGWALHQMQRY 594

Query: 636 REAIKDYDAAL 646
            +A+  YD A+
Sbjct: 595 EQAVASYDKAI 605



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 134/296 (45%), Gaps = 7/296 (2%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A+S +D+ ++ +P Y E+  GRG      +  + AI  F +A++  P + +    RG+A 
Sbjct: 393 ALSAYDKAIEIEPNYQESWRGRGFVLNKLKRYQEAIYSFDKALKLKPESPKVLNARGEAL 452

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             L    EAIQ   KA+E +P      + +  V +  K +  A+      ++L   N+ A
Sbjct: 453 RNLKRYDEAIQSYDKAVELQPEYDQAWYNKAWVLYNLKRYKDALATYEQVIRLKPNNELA 512

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +   G AL ++   + A +A+ KA+Q   +F +AW         L    +A+E  Q+VL 
Sbjct: 513 WYNSGNALVNLNRQRDALKAYSKAVQYKPSFYQAWLSRGNILITLRRYPEAVESFQEVLK 572

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
                  A + +G  LH + ++++A+      +    ++ +  Y R +  + + +Y EA+
Sbjct: 573 YQPNNFDALYSKGWALHQMQRYEQAVASYDKAIAQRRNSYKVWYSRGNSVYKLQKYPEAL 632

Query: 640 KDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
             Y+ A+  + D  E       ++Y K   L+   K       ++     +P ++E
Sbjct: 633 SAYNRAIRYKKDHSE-------SWYSKGNTLFNLGKDEEALAAYNTAIKYNPDYRE 681



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 8/260 (3%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E A+ ++ +AI+  P   +AW  +G+    L    EA+    KA+E EPN  +    RG 
Sbjct: 357 EDALDNYKQAIEIKPEYAQAWNGQGRVLYELNSHKEALSAYDKAIEIEPNYQESWRGRGF 416

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V  K K +  A+      +KL  E+       G AL ++  Y +A +++ KA++L   + 
Sbjct: 417 VLNKLKRYQEAIYSFDKALKLKPESPKVLNARGEALRNLKRYDEAIQSYDKAVELQPEYD 476

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +AW +      +L   + AL   +QV+ +      A++  G  L  L + + A+K  S  
Sbjct: 477 QAWYNKAWVLYNLKRYKDALATYEQVIRLKPNNELAWYNSGNALVNLNRQRDALKAYSKA 536

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQK 666
           +   PS  +    R +    +  Y EA++ +   L  + ++ +        L  +  Y++
Sbjct: 537 VQYKPSFYQAWLSRGNILITLRRYPEAVESFQEVLKYQPNNFDALYSKGWALHQMQRYEQ 596

Query: 667 EIALY---TASKINSEFCWF 683
            +A Y    A + NS   W+
Sbjct: 597 AVASYDKAIAQRRNSYKVWY 616



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 17/255 (6%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N  +Y  AI  +D+ ++  P Y +A   +       +  + A++ + + I+  
Sbjct: 447 ARGEALRNLKRYDEAIQSYDKAVELQPEYDQAWYNKAWVLYNLKRYKDALATYEQVIRLK 506

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   AW   G A   L    +A++  SKA++++P+       RG +    + +  AVE 
Sbjct: 507 PNNELAWYNSGNALVNLNRQRDALKAYSKAVQYKPSFYQAWLSRGNILITLRRYPEAVES 566

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K    N  A    G AL  +  Y++A  ++ KAI   RN  + W         L 
Sbjct: 567 FQEVLKYQPNNFDALYSKGWALHQMQRYEQAVASYDKAIAQRRNSYKVWYSRGNSVYKLQ 626

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +AL    + +   K  S++++ +G  L  LG+ ++A+   ++ +  +P         
Sbjct: 627 KYPEALSAYNRAIRYKKDHSESWYSKGNTLFNLGKDEEALAAYNTAIKYNP--------- 677

Query: 626 ASCYHAIGEYREAIK 640
                   +YREAIK
Sbjct: 678 --------DYREAIK 684



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 43/212 (20%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N+ D L+++    ++ + +  A+++    +++  E   A+   G  L  +  +K+A  A+
Sbjct: 339 NAGD-LYKKANTFYELQRYEDALDNYKQAIEIKPEYAQAWNGQGRVLYELNSHKEALSAY 397

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            KAI+++ N+ E+W                                    RG +L+ L +
Sbjct: 398 DKAIEIEPNYQESW----------------------------------RGRGFVLNKLKR 423

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL--ELDSM---EK 655
           +++AI      L + P + + L  R      +  Y EAI+ YD A++L  E D     + 
Sbjct: 424 YQEAIYSFDKALKLKPESPKVLNARGEALRNLKRYDEAIQSYDKAVELQPEYDQAWYNKA 483

Query: 656 FVLQCLAFYQKEIALYTAS---KINSEFCWFD 684
           +VL  L  Y+  +A Y      K N+E  W++
Sbjct: 484 WVLYNLKRYKDALATYEQVIRLKPNNELAWYN 515


>gi|404318522|ref|ZP_10966455.1| hypothetical protein OantC_10032 [Ochrobactrum anthropi CTS-325]
          Length = 285

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V  
Sbjct: 56  ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALV-- 113

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
                                    Y Y+G +  ++ +Y KA       IQL+  +  A+
Sbjct: 114 -------------------------YRYMGDSTKAVQDYSKA-------IQLNSQYDAAY 141

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                 Y+     ++AL    Q + +     +AYH RGL+    GQHK+AI+D S  + +
Sbjct: 142 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISL 201

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 202 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVY 250



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 90/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D+++AIQ N 
Sbjct: 76  RGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTKAVQDYSKAIQLNS 135

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+  +       H RG++         A+ED 
Sbjct: 136 QYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDF 195

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 196 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGD 255

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 256 KAKAANSYSRAVQLDPKYQPA 276



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 56  ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYR 115

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G+S +A+QD SKA++           RG V  +    + A+ D +  + L   +  AY
Sbjct: 116 YMGDSTKAVQDYSKAIQLNSQYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAY 175

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G++K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 176 HNRGLIYQAKGQHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 235

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    S  + +DP
Sbjct: 236 DQNIAESWANQALVYEHNGDKAKAANSYSRAVQLDP 271



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 60/135 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG      G+   A+S F+Q +        A   RG     + + + AI DF++AI  
Sbjct: 142 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISL 201

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N +A E +  RG +  ALG+   A  D + A+  + N A+    + +V     D   A  
Sbjct: 202 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGDKAKAAN 261

Query: 505 DLSACVKLDKENKSA 519
             S  V+LD + + A
Sbjct: 262 SYSRAVQLDPKYQPA 276


>gi|91772293|ref|YP_564985.1| TPR repeat-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91711308|gb|ABE51235.1| Transmembrane and tetraticopeptide repeat-containing protein
           [Methanococcoides burtonii DSM 6242]
          Length = 414

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 118/257 (45%)

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
            ++EG +A A++ F+  +   P  P A  G+G +  +  + EAAI  +  A+Q +P+   
Sbjct: 1   MLDEGDHAGALNAFETAIMYQPNVPAAWYGKGDSHFYLGDYEAAIQAYDMALQYDPNLLN 60

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+  +  + A +G+S EA     KA     + A+I   +G   +    ++ +V      +
Sbjct: 61  AYAGKADSLAKIGKSDEARTLYEKATAIGADDAEIWSRKGSTLYGLGYYSESVNAYDKAI 120

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
            LD  N  +Y   G +L  I +Y  A EA  +A+  D  +  +W      Y  L   E A
Sbjct: 121 SLDPTNILSYVGKGYSLIGIAQYSDALEAFEEALVFDNGYSISWVGKGDCYYGLGGYEAA 180

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           +      L ID  FS A+  +G  L+ +G H+ AI    + L   P  ++ L  +A    
Sbjct: 181 ISAYDMALSIDPTFSPAWSGKGYSLYEIGDHEGAIVAFDTALFHSPKYVKALSGKAFTLF 240

Query: 631 AIGEYREAIKDYDAALD 647
           A+ EY  ++  ++  +D
Sbjct: 241 ALEEYDLSLIAFNETID 257



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 5/246 (2%)

Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K+IS+D       + +G + +   +Y+ A+  F++ L  D  Y  + +G+G         
Sbjct: 118 KAISLDPTNILSYVGKGYSLIGIAQYSDALEAFEEALVFDNGYSISWVGKGDCYYGLGGY 177

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           EAAIS +  A+  +P+   AW  +G +   +G+   AI     AL   P     L  +  
Sbjct: 178 EAAISAYDMALSIDPTFSPAWSGKGYSLYEIGDHEGAIVAFDTALFHSPKYVKALSGKAF 237

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             F  ++++ ++   +  +  D     A++  G  LS IG+ ++A  ++  ++QL     
Sbjct: 238 TLFALEEYDLSLIAFNETIDADASYAKAWSGKGDVLSQIGKAEQATASYRMSVQLYSGDA 297

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +A  +L +   ++    +ALE  +  L ++     A   +G  L+ LG +K A       
Sbjct: 298 DALYNLGRELFEMGLFSEALEAFEASLNVNSENLFALVGKGYALYELGDYKGASVAFDQA 357

Query: 612 LGIDPS 617
           + + P 
Sbjct: 358 IAVQPG 363



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 47/255 (18%), Positives = 105/255 (41%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y+ +++ +D+ +  DP    + +G+G +     +   A+  F EA+  +     +W  
Sbjct: 107 GYYSESVNAYDKAISLDPTNILSYVGKGYSLIGIAQYSDALEAFEEALVFDNGYSISWVG 166

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G     LG    AI     AL  +P  +     +G   ++  D   A+      +    
Sbjct: 167 KGDCYYGLGGYEAAISAYDMALSIDPTFSPAWSGKGYSLYEIGDHEGAIVAFDTALFHSP 226

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A +     L ++ EY  +  A  + I  D ++ +AW         +  +E+A    
Sbjct: 227 KYVKALSGKAFTLFALEEYDLSLIAFNETIDADASYAKAWSGKGDVLSQIGKAEQATASY 286

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           +  + +    + A +  G  L  +G   +A++   + L ++  N+  L  +    + +G+
Sbjct: 287 RMSVQLYSGDADALYNLGRELFEMGLFSEALEAFEASLNVNSENLFALVGKGYALYELGD 346

Query: 635 YREAIKDYDAALDLE 649
           Y+ A   +D A+ ++
Sbjct: 347 YKGASVAFDQAIAVQ 361


>gi|153939961|ref|YP_001391307.1| hypothetical protein CLI_2049 [Clostridium botulinum F str.
           Langeland]
 gi|384462321|ref|YP_005674916.1| hypothetical protein CBF_2034 [Clostridium botulinum F str. 230613]
 gi|152935857|gb|ABS41355.1| tetratricopeptide repeat family protein [Clostridium botulinum F
           str. Langeland]
 gi|295319338|gb|ADF99715.1| tetratricopeptide repeat family protein [Clostridium botulinum F
           str. 230613]
          Length = 251

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 34/221 (15%)

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +  +++  I  +T +I+  PS  +A+  R +    LGE  ++I+D +K LE  P   D  
Sbjct: 34  YSSDIKDKIKFYTISIKLKPSFIDAYFNRAELYKELGEYNKSIEDYNKILELNPKDKDCY 93

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + R IV +  K+++ +++DL   V +DK  K+ Y   G+    I +YK+A     KAI  
Sbjct: 94  NNRAIVYYLIKNYDKSLQDLDVLVSIDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIH- 152

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
                          +DLA+SE                  AY  R    + L ++  +IK
Sbjct: 153 ---------------EDLADSE------------------AYENRAFAYYNLKKYSSSIK 179

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           D ++ L + P N      R + Y+ I  Y +AI DY  AL+
Sbjct: 180 DYTNALKLTPENKNIYLNRGTIYYKIKNYEDAISDYMKALN 220



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 64/119 (53%)

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +GEY K+ E + K ++L+    + + +    Y  + N +K+L+ L  ++ IDK +   Y 
Sbjct: 69  LGEYNKSIEDYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDVLVSIDKHYKNIYF 128

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            RG++  G+  +K+A  + +  +  D ++ E    RA  Y+ + +Y  +IKDY  AL L
Sbjct: 129 NRGMVFLGIEDYKRAAIEFTKAIHEDLADSEAYENRAFAYYNLKKYSSSIKDYTNALKL 187



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 61/135 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I       Y  ++   D ++  D  Y      RG       + + A  +FT+AI  +
Sbjct: 95  NRAIVYYLIKNYDKSLQDLDVLVSIDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHED 154

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  EA++ R  A   L +   +I+D + AL+  P + +I   RG + +K K++  A+ D
Sbjct: 155 LADSEAYENRAFAYYNLKKYSSSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYEDAISD 214

Query: 506 LSACVKLDKENKSAY 520
               +   +++ S Y
Sbjct: 215 YMKALNCKEKDPSFY 229



 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 44/225 (19%), Positives = 92/225 (40%), Gaps = 8/225 (3%)

Query: 321 SNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSIS 380
           +N N    +K S+  NK   + E+    ++        S++ K   KF    I K K   
Sbjct: 4   TNFNEFKLAKKSVKKNKYESNAENFFSNAY-------YSSDIKDKIKFYTISI-KLKPSF 55

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D   +R       G+Y  +I  +++IL+ +P   +    R       +  + ++ D   
Sbjct: 56  IDAYFNRAELYKELGEYNKSIEDYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDV 115

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            +  +      +  RG     + +   A  + +KA+  +   ++    R    +  K ++
Sbjct: 116 LVSIDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDLADSEAYENRAFAYYNLKKYS 175

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           ++++D +  +KL  ENK+ Y   G     I  Y+ A   ++KA+ 
Sbjct: 176 SSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYEDAISDYMKALN 220


>gi|153874908|ref|ZP_02002939.1| O-linked N-acetylglucosamine transferase [Beggiatoa sp. PS]
 gi|152068628|gb|EDN67061.1| O-linked N-acetylglucosamine transferase [Beggiatoa sp. PS]
          Length = 240

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 13/215 (6%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALE-----------FEPNS--ADILHERGIVNFKF 496
           + W +RG A   L    EA++   KAL+           ++ NS  A     RGI     
Sbjct: 8   QTWIKRGIALHNLNHYQEAVESYDKALQIPDDDALSGYRYKRNSDKAWAWANRGIALSDL 67

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           K +  A+E     ++++ ++  A+   G AL  +G Y++A E+  KAIQ++ ++ EAW  
Sbjct: 68  KRYEQAIESYDKALQINPDDDEAWNNRGFALGKLGSYQEALESFDKAIQINPDYDEAWAF 127

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                 +L   ++ +E   + L I+  + + ++ RGL+L  LG HK+AI+  +  L I P
Sbjct: 128 YGATLNELGFHKEVIEKYDKALQINPNYYEVWYCRGLVLFTLGCHKEAIESYNKALQIKP 187

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
              E  Y R    + +  Y+EAI  YD AL +  D
Sbjct: 188 DYHEAWYNRGLALYYLKRYQEAIDSYDKALQIRPD 222



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 82/161 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  +  +Y  AI  +D+ L+ +P   EA   RG A       + A+  F +AIQ N
Sbjct: 59  NRGIALSDLKRYEQAIESYDKALQINPDDDEAWNNRGFALGKLGSYQEALESFDKAIQIN 118

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW   G     LG   E I+   KAL+  PN  ++ + RG+V F       A+E 
Sbjct: 119 PDYDEAWAFYGATLNELGFHKEVIEKYDKALQINPNYYEVWYCRGLVLFTLGCHKEAIES 178

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            +  +++  +   A+   GLAL  +  Y++A +++ KA+Q+
Sbjct: 179 YNKALQIKPDYHEAWYNRGLALYYLKRYQEAIDSYDKALQI 219



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/253 (27%), Positives = 109/253 (43%), Gaps = 49/253 (19%)

Query: 385 LSRGIAQVNEGKYASAISIFD---QILKEDPM----YPE------ALIGRGTARAFQREL 431
           + RGIA  N   Y  A+  +D   QI  +D +    Y        A   RG A +  +  
Sbjct: 11  IKRGIALHNLNHYQEAVESYDKALQIPDDDALSGYRYKRNSDKAWAWANRGIALSDLKRY 70

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI  + +A+Q NP   EAW  RG A   LG   EA++   KA++  P           
Sbjct: 71  EQAIESYDKALQINPDDDEAWNNRGFALGKLGSYQEALESFDKAIQINP----------- 119

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                 D++                  A+ + G  L+ +G +K+  E + KA+Q++ N+ 
Sbjct: 120 ------DYD-----------------EAWAFYGATLNELGFHKEVIEKYDKALQINPNYY 156

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           E W         L   ++A+E   + L I   + +A++ RGL L+ L ++++AI      
Sbjct: 157 EVWYCRGLVLFTLGCHKEAIESYNKALQIKPDYHEAWYNRGLALYYLKRYQEAIDSYDKA 216

Query: 612 LGIDPSNIECLYL 624
           L I P   E LYL
Sbjct: 217 LQIRPD--EQLYL 227


>gi|301611744|ref|XP_002935393.1| PREDICTED: hypothetical protein LOC100485775 [Xenopus (Silurana)
            tropicalis]
          Length = 1702

 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 134/293 (45%), Gaps = 21/293 (7%)

Query: 394  EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
            +GK  +A+   + I+K + +Y +A + +      + +   +I  +T+A++  P   E + 
Sbjct: 836  QGKTTAALEDLNMIIKLNKLYTDAYLSKAEIYKQEGDYTMSILSYTQALKCRPDDDEIYF 895

Query: 454  RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RR Q   A  E   A+ D +K  +   +  D L + G+  F+  ++N AV+D +A +K D
Sbjct: 896  RRAQMYEAQDEYKIAMDDYAKCFQLSQSRVDALQKHGMYCFENCNWNIAVQDFTALIKQD 955

Query: 514  KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN--------------------FLEA 553
              N  A  + G A + +  Y +A E    AI L+ +                     L A
Sbjct: 956  INNVEARIFRGRAHTQLANYTEAAEDFSAAIHLNPSNWMAFYYRGCLLLLLCDSSENLNA 1015

Query: 554  WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL-LHGLGQHKKAIKDLSSGL 612
            + +    Y D+    +A+   ++VL +D+    A+   GL+ L     + +AI+  ++ L
Sbjct: 1016 FLYRGILYIDMGLWAEAICDFERVLALDRTVVLAHMNLGLISLLNRKDYAQAIRHFTAAL 1075

Query: 613  GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
             +DP  I+    RA  +  I +   A+KD   A+ L  DS + ++++    Y+
Sbjct: 1076 NVDPVYIKAYLCRAQAFQQINDLNNAMKDITRAIHLHPDSPQPYLIRGQYLYE 1128



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 4/259 (1%)

Query: 396  KYASAISIFDQILKEDPMYPEALIGRGTAR---AFQRELEAAISDFTEAIQSNPSAGEAW 452
            +Y  A+  F+Q L   P+  EA IGRG A      QR    A  DF  A+  +PS   A 
Sbjct: 1408 QYEEAVQAFNQALNITPLSAEACIGRGNAYIEYGHQRGTAQAKRDFLRALHLSPSCVAAR 1467

Query: 453  KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
               G    A G   +A    + AL+ +P S      R IV+ +  D  AA++D++A +KL
Sbjct: 1468 ICLGYTLQAQGLFQQAWNHFTVALDIDPQSILGFEGRAIVSLQIGDTFAALQDMNAALKL 1527

Query: 513  DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
                +   T  G+    +G+   A   +  AI  D+++  A+ +    Y       +A E
Sbjct: 1528 CGSAQ-LLTNRGVIHQFMGKLPNAMRDYQAAITADQDYSLAYFNAANLYLHNRQFTQAKE 1586

Query: 573  CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
               + + +D     A   RG+    L   + A+ D    L + P +    + RAS Y+ +
Sbjct: 1587 YYTRAVALDPANESAVLNRGITNMLLQDAQAALHDFQLVLSLCPVSSAAYFNRASLYNTL 1646

Query: 633  GEYREAIKDYDAALDLELD 651
             +Y+ A  D   AL+L+ D
Sbjct: 1647 QQYQWAESDISQALNLQPD 1665



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 138/297 (46%), Gaps = 19/297 (6%)

Query: 389  IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQSNP 446
            I+ +N   YA AI  F   L  DP+Y +A + R  A+AFQ+  +L  A+ D T AI  +P
Sbjct: 1056 ISLLNRKDYAQAIRHFTAALNVDPVYIKAYLCR--AQAFQQINDLNNAMKDITRAIHLHP 1113

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
             + + +  RGQ    + +   A   ++ A E    S+    ++ +V    + ++ A+E L
Sbjct: 1114 DSPQPYLIRGQYLYEMKKYSLASFCINYAAEMTQGSSAA--QQALVQSFRQQYSNAIECL 1171

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR----------NFLEAWGH 556
             + ++  K   +    LG         K A +    A+ + +          N  E   +
Sbjct: 1172 VSAIQ-AKPAPALVILLGKIQMKANNSKDAVKTFRDALDMFKSSNDLILSPSNKAEILFN 1230

Query: 557  LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
            L   Y +  + +KALE L   + +  RF +AY+ RGL    L Q  K + D +  L I+P
Sbjct: 1231 LGLCYMEQFDFQKALEALTSAIKVRSRFHEAYYQRGLCRMHL-QQAKCLDDFNKALEINP 1289

Query: 617  SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ-CLAFYQKEIALYT 672
            +  + L  RA+ Y     Y +AI + +AA+ ++  S+  ++ +  L +Y K +  Y+
Sbjct: 1290 NYFQALLCRATFYGFRKRYSKAIMNCNAAIKVQPHSVRAYLYRGALKYYIKALKDYS 1346



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 13/269 (4%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            RG+ +++  + A  +  F++ L+ +P Y +AL+ R T   F++    AI +   AI+  P
Sbjct: 1265 RGLCRMHLQQ-AKCLDDFNKALEINPNYFQALLCRATFYGFRKRYSKAIMNCNAAIKVQP 1323

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKAL---EFEPNSADILHERGIVNFKFKDFNAAV 503
             +  A+  RG    AL   ++A++D S  L    ++   + +L  RG++  + +DF  A+
Sbjct: 1324 HSVRAYLYRG----ALKYYIKALKDYSIVLLLGGWKEVDSKVLVNRGLLYLELQDFANAL 1379

Query: 504  EDLSACVKLDKENK-SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQ 559
            ED   CV L        +  +G     + +Y++A +A  +A+ +     EA    G+   
Sbjct: 1380 EDFK-CVALRTPGDIKIHLVIGNCHQRLQQYEEAVQAFNQALNITPLSAEACIGRGNAYI 1438

Query: 560  FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             Y     + +A     + L++      A    G  L   G  ++A    +  L IDP +I
Sbjct: 1439 EYGHQRGTAQAKRDFLRALHLSPSCVAARICLGYTLQAQGLFQQAWNHFTVALDIDPQSI 1498

Query: 620  ECLYLRASCYHAIGEYREAIKDYDAALDL 648
                 RA     IG+   A++D +AAL L
Sbjct: 1499 LGFEGRAIVSLQIGDTFAALQDMNAALKL 1527



 Score = 43.1 bits (100), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 62/306 (20%), Positives = 118/306 (38%), Gaps = 39/306 (12%)

Query: 421  RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
            RG       +L  AI D   AI   P   +A+  R       G++  A++DL+  ++   
Sbjct: 795  RGALNRKLGKLSLAIQDLNLAINLEPQLLDAYWNRHLIFCLQGKTTAALEDLNMIIKLNK 854

Query: 481  NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
               D    +  +  +  D+  ++   +  +K   ++   Y        +  EYK A + +
Sbjct: 855  LYTDAYLSKAEIYKQEGDYTMSILSYTQALKCRPDDDEIYFRRAQMYEAQDEYKIAMDDY 914

Query: 541  LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
             K  QL ++ ++A      +  +  N   A++    ++  D    +A   RG     L  
Sbjct: 915  AKCFQLSQSRVDALQKHGMYCFENCNWNIAVQDFTALIKQDINNVEARIFRGRAHTQLAN 974

Query: 601  HKKAIKDLSSGLGIDPSNIECLYLRAS--------------------CYHAIGEYREAIK 640
            + +A +D S+ + ++PSN    Y R                       Y  +G + EAI 
Sbjct: 975  YTEAAEDFSAAIHLNPSNWMAFYYRGCLLLLLCDSSENLNAFLYRGILYIDMGLWAEAIC 1034

Query: 641  DYDAALDLE----LDSMEKFVLQCLAF--YQKEIALYTASKINSEFCWFDIDGDIDPLF- 693
            D++  L L+    L  M   ++  L    Y + I  +TA+             ++DP++ 
Sbjct: 1035 DFERVLALDRTVVLAHMNLGLISLLNRKDYAQAIRHFTAAL------------NVDPVYI 1082

Query: 694  KEYWCK 699
            K Y C+
Sbjct: 1083 KAYLCR 1088


>gi|449068029|ref|YP_007435111.1| hypothetical protein SacN8_10065 [Sulfolobus acidocaldarius N8]
 gi|449070302|ref|YP_007437383.1| hypothetical protein SacRon12I_10085 [Sulfolobus acidocaldarius
           Ron12/I]
 gi|449036537|gb|AGE71963.1| hypothetical protein SacN8_10065 [Sulfolobus acidocaldarius N8]
 gi|449038810|gb|AGE74235.1| hypothetical protein SacRon12I_10085 [Sulfolobus acidocaldarius
           Ron12/I]
          Length = 420

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 141/280 (50%), Gaps = 15/280 (5%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE----------ALIGRGTARAFQREL- 431
           +  +RG+A  N   Y+ AI  FD+ ++ +P + +          AL   G+  A   +L 
Sbjct: 47  YHFNRGLAYFNLNNYSEAIREFDEAIRLNPFHADSHYYKALSLIALQRSGSVNAGISDLY 106

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI +F EAI+ +P   E   ++G A   LG   EA+ +   A++  P + +  + + I
Sbjct: 107 ERAILEFDEAIKIDPKNPEYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAI 166

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           +    + +  A+ ++   ++L+ +N + Y    L L S+G+ K+A +   KAI L+    
Sbjct: 167 ILQDQEKYVDAIAEVDTAIRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVA 226

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR-GLLLHGLGQHKKAIKDLSS 610
           E +       ++L   +  L+     + +    +  YH R G+L + LG+++KA+ +L  
Sbjct: 227 EYYHQKGLILKELKRYDDVLKDYDNAIKLSPN-NPEYHFRKGVLYYELGKYEKAVMELEE 285

Query: 611 GLGIDPSNIECLY-LRASCYHAIGEYREAIKDYDAALDLE 649
            + ++P+N E  Y L  + +H +  Y +A++++D A+ L+
Sbjct: 286 SVRLNPNNPEYHYQLGLALFHVMM-YEDAVEEFDKAVKLD 324



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 129/273 (47%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           ++   +G+A    G+   A+  +   +K +P  PE    +      Q +   AI++   A
Sbjct: 125 EYHYQKGLALEILGRQYEALLEYQDAIKLNPRNPEYYYRKAIILQDQEKYVDAIAEVDTA 184

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP     + R+     ++G+  EA+  L KA+   P  A+  H++G++  + K ++ 
Sbjct: 185 IRLNPKNSTYYFRKALLLKSMGKLKEALDQLDKAISLNPQVAEYYHQKGLILKELKRYDD 244

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            ++D    +KL   N   +   G+    +G+Y+KA     ++++L+ N  E    L    
Sbjct: 245 VLKDYDNAIKLSPNNPEYHFRKGVLYYELGKYEKAVMELEESVRLNPNNPEYHYQLGLAL 304

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             +   E A+E   + + +D +  + Y+ +G  L  L ++ KAIK+    + ++P++   
Sbjct: 305 FHVMMYEDAVEEFDKAVKLDPQNPQYYYYKGNALKALWKYDKAIKEYDKAISLNPNDPLP 364

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
            Y +      +G+Y EAI + D A+ L  D+ +
Sbjct: 365 HYQKGVVLKTLGKYEEAIVELDEAIKLNPDNQQ 397


>gi|425442756|ref|ZP_18822993.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9717]
 gi|389716117|emb|CCH99609.1| Tetratricopeptide repeat protein (fragment) [Microcystis aeruginosa
           PCC 9717]
          Length = 492

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 142/282 (50%), Gaps = 5/282 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG     + KY  A+S F++ +  +  + +A   RG     Q++ E A++D+ +AI  N
Sbjct: 207 NRGNLYSYQQKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDIN 266

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL---HERGIVNFKFKDFNAA 502
           P+   A+  RG   + L +   A+ D +KA++   NS D+      RGI   + + ++ A
Sbjct: 267 PNDAGAYASRGNLYSDLQKYELALADYNKAIDI--NSDDVFSAYFYRGIFYHRQQKYDLA 324

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + DL+  ++L+      Y   G+   +  +Y+ A   + KAI+LD N+  A+ +  + Y+
Sbjct: 325 LADLNKAIELNSNFSHFYVVRGILHENKEKYELALADYSKAIELDSNYANAYYNRGELYR 384

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                + AL    + + I+  ++ AY+ RG L   L +++ A+ D S  + I+P+  +  
Sbjct: 385 LQKKYDLALADYSKAIEINPNYAYAYYNRGNLYSDLQKYELALADYSKAIDINPNYADAY 444

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
             R   Y+ + +Y  A+ DY+ A+ +  +  + +  + L +Y
Sbjct: 445 NNRGVVYYNLQKYDLALADYNQAIRINPNYAQAYYNRGLLYY 486



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 5/175 (2%)

Query: 364 RNKKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           R +K+ +     +K+I ++     F + RGI   N+ KY  A++ + + ++ D  Y  A 
Sbjct: 317 RQQKYDLALADLNKAIELNSNFSHFYVVRGILHENKEKYELALADYSKAIELDSNYANAY 376

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
             RG     Q++ + A++D+++AI+ NP+   A+  RG   + L +   A+ D SKA++ 
Sbjct: 377 YNRGELYRLQKKYDLALADYSKAIEINPNYAYAYYNRGNLYSDLQKYELALADYSKAIDI 436

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
            PN AD  + RG+V +  + ++ A+ D +  ++++     AY   GL   ++ +Y
Sbjct: 437 NPNYADAYNNRGVVYYNLQKYDLALADYNQAIRINPNYAQAYYNRGLLYYNLQKY 491



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 125/263 (47%), Gaps = 1/263 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R +   ++ KY  A+  +++ ++ +P Y     GRG     Q++ + A++DF +AI  NP
Sbjct: 140 RALHYSSQQKYDLALDDYNKAIELNPNYGLYYRGRGLNYLLQQKYDLALADFNKAIDINP 199

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   A+  RG   +   +   A+ D +KA++   N A     RG +  + + +  A+ D 
Sbjct: 200 NDAGAYNNRGNLYSYQQKYDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADY 259

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR-NFLEAWGHLTQFYQDLA 565
           +  + ++  +  AY   G   S + +Y+ A   + KAI ++  +   A+ +   FY    
Sbjct: 260 NKAIDINPNDAGAYASRGNLYSDLQKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQ 319

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             + AL  L + + ++  FS  Y +RG+L     +++ A+ D S  + +D +     Y R
Sbjct: 320 KYDLALADLNKAIELNSNFSHFYVVRGILHENKEKYELALADYSKAIELDSNYANAYYNR 379

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
              Y    +Y  A+ DY  A+++
Sbjct: 380 GELYRLQKKYDLALADYSKAIEI 402



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 5/259 (1%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           + KY  A+   ++ ++ +P Y  A   R    + Q++ + A+ D+ +AI+ NP+ G  ++
Sbjct: 113 QQKYELALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALDDYNKAIELNPNYGLYYR 172

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG       +   A+ D +KA++  PN A   + RG +    + ++ A+ D +  + L+
Sbjct: 173 GRGLNYLLQQKYDLALADFNKAIDINPNDAGAYNNRGNLYSYQQKYDLALSDFNKAIDLN 232

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
           +    AY   G       +Y+ A   + KAI ++ N   A+      Y DL   E AL  
Sbjct: 233 RNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAGAYASRGNLYSDLQKYELALAD 292

Query: 574 LQQVLYI--DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
             + + I  D  FS AY  RG+  H   ++  A+ DL+  + ++ SN    Y+     H 
Sbjct: 293 YNKAIDINSDDVFS-AYFYRGIFYHRQQKYDLALADLNKAIELN-SNFSHFYVVRGILHE 350

Query: 632 IGE-YREAIKDYDAALDLE 649
             E Y  A+ DY  A++L+
Sbjct: 351 NKEKYELALADYSKAIELD 369



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 3/256 (1%)

Query: 415 PEAL--IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
           P AL  + R      Q++ E A+ D  +AI+ NP+   A+  R    ++  +   A+ D 
Sbjct: 98  PRALWYVIRAKYYFLQQKYELALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALDDY 157

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           +KA+E  PN       RG+     + ++ A+ D +  + ++  +  AY   G   S   +
Sbjct: 158 NKAIELNPNYGLYYRGRGLNYLLQQKYDLALADFNKAIDINPNDAGAYNNRGNLYSYQQK 217

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           Y  A     KAI L+RNF +A+ +    Y+     E AL    + + I+   + AY  RG
Sbjct: 218 YDLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAGAYASRG 277

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDYDAALDLELD 651
            L   L +++ A+ D +  + I+  ++   Y  R   YH   +Y  A+ D + A++L  +
Sbjct: 278 NLYSDLQKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQKYDLALADLNKAIELNSN 337

Query: 652 SMEKFVLQCLAFYQKE 667
               +V++ +    KE
Sbjct: 338 FSHFYVVRGILHENKE 353



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 66/305 (21%), Positives = 131/305 (42%), Gaps = 42/305 (13%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G  R  +   E A++   +AI   P++ +++  +     +L    E +  +++A++  P 
Sbjct: 40  GREREARENYEQALTVINQAISLFPNSPKSYIMKESVLDSLERYDEGLAAINQAIDLAPR 99

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           +   +  R    F  + +  A++D +  ++L+     AY+   L  SS  +Y  A + + 
Sbjct: 100 ALWYV-IRAKYYFLQQKYELALDDHNKAIELNPNYAMAYSVRALHYSSQQKYDLALDDYN 158

Query: 542 KAIQLDRNFLEAW-----GHLTQFYQDLA------------------NSEKALECLQQ-- 576
           KAI+L+ N+   +      +L Q   DLA                  N+   L   QQ  
Sbjct: 159 KAIELNPNYGLYYRGRGLNYLLQQKYDLALADFNKAIDINPNDAGAYNNRGNLYSYQQKY 218

Query: 577 ---------VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
                     + +++ F+KAY  RG L     +++ A+ D +  + I+P++      R +
Sbjct: 219 DLALSDFNKAIDLNRNFAKAYENRGNLYRRQQKYELALADYNKAIDINPNDAGAYASRGN 278

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE----IALYTASK---INSEF 680
            Y  + +Y  A+ DY+ A+D+  D +         FY ++    +AL   +K   +NS F
Sbjct: 279 LYSDLQKYELALADYNKAIDINSDDVFSAYFYRGIFYHRQQKYDLALADLNKAIELNSNF 338

Query: 681 CWFDI 685
             F +
Sbjct: 339 SHFYV 343


>gi|330507994|ref|YP_004384422.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328928802|gb|AEB68604.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 349

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 115/230 (50%), Gaps = 2/230 (0%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q + + AIS +  AI  +P    AW  +G A   L +S EAI    KA E  P SA+  +
Sbjct: 90  QGKFDEAISCYDNAIGKDPKNKLAWVNKGAALLELMKSDEAISCFDKATELYPKSAEAWN 149

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           E+G    +   F+ A+   +  + ++  +  A+   G+AL + G++ +A +A+ +AI + 
Sbjct: 150 EKGYALNRLDRFDEAIIAFNNAIDINPRSADAWNGKGIALDNSGKHDEAIQAYDRAIAIR 209

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
             F  AW +       L   E+A++   + + I+ +   +++ +G  L  LG+H +A+K 
Sbjct: 210 PKFAIAWNNKGWALSGLGKKEEAIQAYNKAISINSKDPSSWNCKGNALADLGKHDEAVKA 269

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
               + +DP +      + + ++ +  Y EA++ ++ A  +E+D  E  +
Sbjct: 270 YGRAIELDPKDAILWNNKGAAFYGLSRYEEALEAFNKA--IEIDPQEALI 317



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 128/267 (47%), Gaps = 2/267 (0%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           RI KS+  S    L +G    ++GK+  AIS +D  + +DP    A + +G A     + 
Sbjct: 70  RIPKSREASK--WLKKGDDLYDQGKFDEAISCYDNAIGKDPKNKLAWVNKGAALLELMKS 127

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AIS F +A +  P + EAW  +G A   L    EAI   + A++  P SAD  + +GI
Sbjct: 128 DEAISCFDKATELYPKSAEAWNEKGYALNRLDRFDEAIIAFNNAIDINPRSADAWNGKGI 187

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                   + A++     + +  +   A+   G ALS +G+ ++A +A+ KAI ++    
Sbjct: 188 ALDNSGKHDEAIQAYDRAIAIRPKFAIAWNNKGWALSGLGKKEEAIQAYNKAISINSKDP 247

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            +W        DL   ++A++   + + +D + +  ++ +G   +GL ++++A++  +  
Sbjct: 248 SSWNCKGNALADLGKHDEAVKAYGRAIELDPKDAILWNNKGAAFYGLSRYEEALEAFNKA 307

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREA 638
           + IDP      + +     A+    E+
Sbjct: 308 IEIDPQEALIWHFKGETLKALNRTEES 334


>gi|116619265|ref|YP_821421.1| hypothetical protein Acid_0121 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222427|gb|ABJ81136.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 608

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 34/282 (12%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD    R  A     ++  A   F Q ++     PE  +GRG ARA QR+   AI DF  
Sbjct: 138 VDVYSGRAKAYTATREFDKAEEDFTQAIRLRLDNPEPYLGRGIARAEQRKYRDAIEDFDS 197

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            I   P   E W  R  A   L +   A  DL++AL+  PN       RG V  +  D  
Sbjct: 198 CIGRKPDHEECWVERALAFTGLNDYTHAQTDLNEALKLNPNDTRAWRVRGAVRERLSDDA 257

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            AV D +  +K D ++   Y    +A +++                              
Sbjct: 258 GAVADYTEALKRDDKDVRVY----MARAAV------------------------------ 283

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y  +   E++LE   Q + +D +  + Y  RG   H LGQH+K ++D +  +G+ P +  
Sbjct: 284 YVRMKKFEESLEDRNQAVQLDPKNPEVYVARGGSYHLLGQHEKGLEDRTKAIGLQPGSAL 343

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
               R   +  +G + EA++D + A  L+ ++ +   L+ LA
Sbjct: 344 GWTARGDAFFLLGRWDEALRDLEQATKLDPNNADTRQLRALA 385



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 123/278 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG    + G+ A AI+ +   L  DP   EAL  RG       +   A +DF  AI+  P
Sbjct: 42  RGKKADDAGQRAEAIAAYSDALAADPSNTEALRARGKDYQADGDRAKAQADFDRAIELQP 101

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  E +  R    AA G+   AI D + A+  +    D+   R       ++F+ A ED 
Sbjct: 102 ARAEGYVVRAGFFAATGQPERAIHDYTLAINLKMEHVDVYSGRAKAYTATREFDKAEEDF 161

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++L  +N   Y   G+A +   +Y+ A E     I    +  E W      +  L +
Sbjct: 162 TQAIRLRLDNPEPYLGRGIARAEQRKYRDAIEDFDSCIGRKPDHEECWVERALAFTGLND 221

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              A   L + L ++   ++A+ +RG +   L     A+ D +  L  D  ++     RA
Sbjct: 222 YTHAQTDLNEALKLNPNDTRAWRVRGAVRERLSDDAGAVADYTEALKRDDKDVRVYMARA 281

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
           + Y  + ++ E+++D + A+ L+  + E +V +  +++
Sbjct: 282 AVYVRMKKFEESLEDRNQAVQLDPKNPEVYVARGGSYH 319



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R    V   K+  ++   +Q ++ DP  PE  + RG +     + E  + D T+AI  
Sbjct: 278 MARAAVYVRMKKFEESLEDRNQAVQLDPKNPEVYVARGGSYHLLGQHEKGLEDRTKAIGL 337

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
            P +   W  RG A   LG   EA++DL +A + +PN+AD    R +  
Sbjct: 338 QPGSALGWTARGDAFFLLGRWDEALRDLEQATKLDPNNADTRQLRALAQ 386



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 64/142 (45%)

Query: 398 ASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQ 457
           A A++ + + LK D       + R       ++ E ++ D  +A+Q +P   E +  RG 
Sbjct: 257 AGAVADYTEALKRDDKDVRVYMARAAVYVRMKKFEESLEDRNQAVQLDPKNPEVYVARGG 316

Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
           +   LG+  + ++D +KA+  +P SA     RG   F    ++ A+ DL    KLD  N 
Sbjct: 317 SYHLLGQHEKGLEDRTKAIGLQPGSALGWTARGDAFFLLGRWDEALRDLEQATKLDPNNA 376

Query: 518 SAYTYLGLALSSIGEYKKAEEA 539
                  LA + + E  K E A
Sbjct: 377 DTRQLRALAQAHVDEKVKEERA 398



 Score = 42.4 bits (98), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 36/72 (50%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G   + E  +A AI    Q +K DP    A   RG A    ++ + +++DF +AI+ NP 
Sbjct: 511 GRKHIQEEHFAQAIGPLTQAIKLDPSLATAFNARGYAYFRLKKFKESLADFDQAIKLNPL 570

Query: 448 AGEAWKRRGQAR 459
              A+  RG AR
Sbjct: 571 YANAYTNRGSAR 582


>gi|384209475|ref|YP_005595195.1| hypothetical protein Bint_1999 [Brachyspira intermedia PWS/A]
 gi|343387125|gb|AEM22615.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 664

 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 38/303 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALI-------------------------- 419
           SRG+A+   G Y  AI  F++ L+ D  + +A                            
Sbjct: 114 SRGVAKYGLGLYEDAIDNFNKTLELDSDFKDAYFIRALSYAKIDKHKEAVDDFNTLLIEY 173

Query: 420 ---------GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
                     RG ++     LE AI DFT AI   P     +  R    + L     AI 
Sbjct: 174 NEINYIYYYYRGLSKYNLNLLEEAIEDFTIAIDYCPDESYIYYERALVYSNLNMFKNAID 233

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D +KA+E      D  + R +  FK +++N A+ED +  ++L+ ++  A    GL   ++
Sbjct: 234 DYTKAIELNEMDVDSYYNRALTYFKLEEYNKAIEDYNKVLELNPDDTEAVYNKGLCKQNL 293

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G +++A E     I  D  F+     L   Y +L   E+A++     +  +  ++ AY+ 
Sbjct: 294 GLFEEAIEDFNSIIDSDNEFV--CYSLGICYLELKRYEEAIDYFDVFIKFNSCYADAYYY 351

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL-DLE 649
           RG     L  +++AI+D +  L +D  +I+  Y RA     +  Y EA+KD+D AL D E
Sbjct: 352 RGNAKFDLEHYEEAIEDYNKTLELDNDHIDAYYERAMAKINLNLYDEAMKDFDEALYDAE 411

Query: 650 LDS 652
            DS
Sbjct: 412 SDS 414



 Score = 76.6 bits (187), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 136/302 (45%), Gaps = 17/302 (5%)

Query: 361 EAKRNKKFCVTRISKSKSISVDFR-----------LSRGIAQVNEGKYASAISIFDQILK 409
           EA  NK  C   +   +    DF             S GI  +   +Y  AI  FD  +K
Sbjct: 281 EAVYNKGLCKQNLGLFEEAIEDFNSIIDSDNEFVCYSLGICYLELKRYEEAIDYFDVFIK 340

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
            +  Y +A   RG A+      E AI D+ + ++ +    +A+  R  A+  L    EA+
Sbjct: 341 FNSCYADAYYYRGNAKFDLEHYEEAIEDYNKTLELDNDHIDAYYERAMAKINLNLYDEAM 400

Query: 470 QDLSKAL---EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           +D  +AL   E + + A +   +  +N   K+++ A+++ +  ++L  +    Y    +A
Sbjct: 401 KDFDEALYDAESDSDRAYLYTLKAALNEISKNYDEAIDNYTKAIELGDD---CYCKRAIA 457

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
             + G  K++   + KAI LD +  E + +      DL   E+A+    + + ++  + +
Sbjct: 458 KHNAGLIKESINDYNKAIDLDPDNYEIYSYKGNAELDLYLYEEAIRDFDKAIELNPNYDE 517

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RG+    L  + +A +D  + + ++  +         CY  + EY EA++++  AL
Sbjct: 518 AYYNRGIANEALKNYDEAFRDYQTTIKLNKEHDYAFNNLGGCYVRLKEYDEALENFYKAL 577

Query: 647 DL 648
           ++
Sbjct: 578 EI 579



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           R  A+     ++ +I+D+ +AI  +P   E +  +G A   L    EAI+D  KA+E  P
Sbjct: 454 RAIAKHNAGLIKESINDYNKAIDLDPDNYEIYSYKGNAELDLYLYEEAIRDFDKAIELNP 513

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N  +  + RGI N   K+++ A  D    +KL+KE+  A+  LG     + EY +A E  
Sbjct: 514 NYDEAYYNRGIANEALKNYDEAFRDYQTTIKLNKEHDYAFNNLGGCYVRLKEYDEALENF 573

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
            KA++++      + ++ +    LA  EK
Sbjct: 574 YKALEINSELSLPYNNIGEVKSRLALKEK 602



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 5/207 (2%)

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+   G ++  L E  E+I+   K +E     ++  H RG+  +    +  A+++ +  +
Sbjct: 77  AYYNIGTSKCNLKEYEESIKYFDKTIELNDKYSNAYHSRGVAKYGLGLYEDAIDNFNKTL 136

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAH---LKAIQLDRNFLEAWGHLTQFYQDLANS 567
           +LD + K AY    L+ + I ++K+A +     L            +  L+++  +L   
Sbjct: 137 ELDSDFKDAYFIRALSYAKIDKHKEAVDDFNTLLIEYNEINYIYYYYRGLSKYNLNLL-- 194

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+A+E     +      S  Y+ R L+   L   K AI D +  + ++  +++  Y RA 
Sbjct: 195 EEAIEDFTIAIDYCPDESYIYYERALVYSNLNMFKNAIDDYTKAIELNEMDVDSYYNRAL 254

Query: 628 CYHAIGEYREAIKDYDAALDLELDSME 654
            Y  + EY +AI+DY+  L+L  D  E
Sbjct: 255 TYFKLEEYNKAIEDYNKVLELNPDDTE 281



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 98/217 (45%), Gaps = 10/217 (4%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKE-----DPMYPEALIGRGTARAFQRELEAAI 435
           +D    R +A++N   Y  A+  FD+ L +     D  Y   L  +       +  + AI
Sbjct: 380 IDAYYERAMAKINLNLYDEAMKDFDEALYDAESDSDRAYLYTL--KAALNEISKNYDEAI 437

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            ++T+AI+      + + +R  A+   G   E+I D +KA++ +P++ +I   +G     
Sbjct: 438 DNYTKAIEL---GDDCYCKRAIAKHNAGLIKESINDYNKAIDLDPDNYEIYSYKGNAELD 494

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
              +  A+ D    ++L+     AY   G+A  ++  Y +A   +   I+L++    A+ 
Sbjct: 495 LYLYEEAIRDFDKAIELNPNYDEAYYNRGIANEALKNYDEAFRDYQTTIKLNKEHDYAFN 554

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           +L   Y  L   ++ALE   + L I+   S  Y+  G
Sbjct: 555 NLGGCYVRLKEYDEALENFYKALEINSELSLPYNNIG 591



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
            K++  +++     ++L+ +  +AY   G+A   +G Y+ A +   K ++LD +F +A+ 
Sbjct: 88  LKEYEESIKYFDKTIELNDKYSNAYHSRGVAKYGLGLYEDAIDNFNKTLELDSDFKDAYF 147

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL-RGLLLHGLGQHKKAIKDLSSGLGI 614
                Y  +   ++A++    +L      +  Y+  RGL  + L   ++AI+D +  +  
Sbjct: 148 IRALSYAKIDKHKEAVDDFNTLLIEYNEINYIYYYYRGLSKYNLNLLEEAIEDFTIAIDY 207

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
            P      Y RA  Y  +  ++ AI DY  A++L    ++ +  + L +++ E
Sbjct: 208 CPDESYIYYERALVYSNLNMFKNAIDDYTKAIELNEMDVDSYYNRALTYFKLE 260


>gi|153008723|ref|YP_001369938.1| hypothetical protein Oant_1392 [Ochrobactrum anthropi ATCC 49188]
 gi|151560611|gb|ABS14109.1| TPR repeat-containing protein [Ochrobactrum anthropi ATCC 49188]
          Length = 301

 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V  
Sbjct: 72  ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALV-- 129

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
                                    Y Y+G +  ++ +Y KA       IQL+  +  A+
Sbjct: 130 -------------------------YRYMGDSTKAVQDYSKA-------IQLNSQYDAAY 157

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                 Y+     ++AL    Q + +     +AYH RGL+    GQHK+AI+D S  + +
Sbjct: 158 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISL 217

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 218 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVY 266



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 90/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D+++AIQ N 
Sbjct: 92  RGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTKAVQDYSKAIQLNS 151

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+  +       H RG++         A+ED 
Sbjct: 152 QYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDF 211

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 212 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGD 271

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 272 KAKAANSYSRAVQLDPKYQPA 292



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 72  ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYR 131

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G+S +A+QD SKA++           RG V  +    + A+ D +  + L   +  AY
Sbjct: 132 YMGDSTKAVQDYSKAIQLNSQYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAY 191

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G++K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 192 HNRGLIYQAKGQHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 251

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    S  + +DP
Sbjct: 252 DQNIAESWANQALVYEHNGDKAKAANSYSRAVQLDP 287



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 60/135 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG      G+   A+S F+Q +        A   RG     + + + AI DF++AI  
Sbjct: 158 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAISL 217

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N +A E +  RG +  ALG+   A  D + A+  + N A+    + +V     D   A  
Sbjct: 218 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNIAESWANQALVYEHNGDKAKAAN 277

Query: 505 DLSACVKLDKENKSA 519
             S  V+LD + + A
Sbjct: 278 SYSRAVQLDPKYQPA 292


>gi|422303664|ref|ZP_16391015.1| Periplasmic protein [Microcystis aeruginosa PCC 9806]
 gi|389791337|emb|CCI12846.1| Periplasmic protein [Microcystis aeruginosa PCC 9806]
          Length = 260

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 10/207 (4%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLSAGDYSGAITDFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL    N  + L  R    +  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQL------DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           G++ +A E + KA+ L      DR F     +    Y      E AL    + L I+  F
Sbjct: 150 GKHLEAIEDYTKALSLQGTRGQDRIFY----NRALAYNRAGQQEMALRDYNESLKINANF 205

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           ++AYH RGL  + LG  +KAI DL + 
Sbjct: 206 AEAYHNRGLTHYKLGNREKAIADLETA 232



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 105/216 (48%), Gaps = 8/216 (3%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  LS      P  A   + RG+      D++ A+ D +  ++L+ ++  AY   G A  
Sbjct: 20  ISPLSSQTTANPVKAVEFYNRGVDRLSAGDYSGAITDFTQALQLEPKDADAYYNRGYAEL 79

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G+Y++A   + +A+ ++ N++ A G+    Y      E A+E   + + ++  F+  +
Sbjct: 80  VLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREAIKDYDAAL 646
             RG     LG+H +AI+D +  L +  +  +    Y RA  Y+  G+   A++DY+ +L
Sbjct: 140 IYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESL 199

Query: 647 DLELDSMEKFVLQCLAFY-----QKEIA-LYTASKI 676
            +  +  E +  + L  Y     +K IA L TA+++
Sbjct: 200 KINANFAEAYHNRGLTHYKLGNREKAIADLETAARL 235



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 2/218 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  +    +NP     +  RG  R + G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 20  ISPLSSQTTANPVKAVEFYNRGVDRLSAGDYSGAITDFTQALQLEPKDADAYYNRGYAEL 79

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A      A     +Y+ A E   KAI L+ NF + +
Sbjct: 80  VLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   + ++ R L  +  GQ + A++D +  L
Sbjct: 140 IYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESL 199

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            I+ +  E  + R   ++ +G   +AI D + A  L L
Sbjct: 200 KINANFAEAYHNRGLTHYKLGNREKAIADLETAARLAL 237



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 2/192 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +++ G Y+ AI+ F Q L+ +P   +A   RG A     + E AI+D+T+A+  N
Sbjct: 39  NRGVDRLSAGDYSGAITDFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQALTIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +   A   R  A     +   A++D +KA+    N AD    RG           A+ED
Sbjct: 99  SNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGKHLEAIED 158

Query: 506 LSACVKLD--KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            +  + L   +     +    LA +  G+ + A   + ++++++ NF EA+ +    +  
Sbjct: 159 YTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYNESLKINANFAEAYHNRGLTHYK 218

Query: 564 LANSEKALECLQ 575
           L N EKA+  L+
Sbjct: 219 LGNREKAIADLE 230



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A++  G+Y  AI+ + Q L  +  Y  AL  R  A    ++ EAA+ D T+A
Sbjct: 69  DAYYNRGYAELVLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKA 128

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG+ +EAI+D +KAL  +       I + R +   +    
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQ 188

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D +  +K++     AY   GL    +G  +KA
Sbjct: 189 EMALRDYNESLKINANFAEAYHNRGLTHYKLGNREKA 225



 Score = 42.4 bits (98), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + GK+  AI  + + L       +  I    A A+ R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGKHLEAIEDYTKALSLQGTRGQDRIFYNRALAYNRAGQQEMALRDYN 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL  A
Sbjct: 197 ESLKINANFAEAYHNRGLTHYKLGNREKAIADLETA 232


>gi|443313119|ref|ZP_21042732.1| Flp pilus assembly protein TadD [Synechocystis sp. PCC 7509]
 gi|442776927|gb|ELR87207.1| Flp pilus assembly protein TadD [Synechocystis sp. PCC 7509]
          Length = 296

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 60/228 (26%), Positives = 110/228 (48%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G  +   R  + AI+D T+AI+ NP++  A+  RG AR   G+   AI D  +AL+  P
Sbjct: 44  QGIQKYEARNYKGAIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIADYQQALKINP 103

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            +    +   I + + +DF AA+ + +  ++L+    +AY   G  +   G+ + A   +
Sbjct: 104 QNYTTYYNLAITHERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQGDPQAALADY 163

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI+LD      + +    Y+ + +++ A+    Q + +   +  AY+ RG     LG 
Sbjct: 164 KQAIRLDPKNPSVYYNQGITYRRIKDNQAAISSFNQAIKLKPDYYSAYNSRGNAFASLGD 223

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            + A+KD    L I+P   +  Y R   Y  +   + A+KD+  A  L
Sbjct: 224 SQAALKDFDRALQINPKAADTYYNRGLLYIELKNNQLALKDFQQAASL 271



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 62/249 (24%), Positives = 123/249 (49%), Gaps = 5/249 (2%)

Query: 346 SKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAIS 402
           ++LS+K  + +       RN K  +  ++++  ++ +  ++   RG A+ + G    AI+
Sbjct: 34  TQLSYKDYLEQGIQKYEARNYKGAIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIA 93

Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
            + Q LK +P                 + +AAI+++T+AI+ NPS   A++ RG      
Sbjct: 94  DYQQALKINPQNYTTYYNLAITHERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQ 153

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G+   A+ D  +A+  +P +  + + +GI   + KD  AA+   +  +KL  +  SAY  
Sbjct: 154 GDPQAALADYKQAIRLDPKNPSVYYNQGITYRRIKDNQAAISSFNQAIKLKPDYYSAYNS 213

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV--LYI 580
            G A +S+G+ + A +   +A+Q++    + + +    Y +L N++ AL+  QQ   LY 
Sbjct: 214 RGNAFASLGDSQAALKDFDRALQINPKAADTYYNRGLLYIELKNNQLALKDFQQAASLYK 273

Query: 581 DKRFSKAYH 589
            +  +K Y 
Sbjct: 274 QQNRTKDYQ 282



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 60/224 (26%), Positives = 104/224 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +GI +     Y  AI+   Q ++ +P    A   RG AR    +   AI+D+ +A++ 
Sbjct: 42  LEQGIQKYEARNYKGAIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIADYQQALKI 101

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP     +         L +   AI + +KA+E  P+ A     RG +     D  AA+ 
Sbjct: 102 NPQNYTTYYNLAITHERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQGDPQAALA 161

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++LD +N S Y   G+    I + + A  +  +AI+L  ++  A+      +  L
Sbjct: 162 DYKQAIRLDPKNPSVYYNQGITYRRIKDNQAAISSFNQAIKLKPDYYSAYNSRGNAFASL 221

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            +S+ AL+   + L I+ + +  Y+ RGLL   L  ++ A+KD 
Sbjct: 222 GDSQAALKDFDRALQINPKAADTYYNRGLLYIELKNNQLALKDF 265



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 89/189 (47%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AI DL++A+   PNS      RG       D   A+ D    +K++ +N + Y  L +  
Sbjct: 57  AIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIADYQQALKINPQNYTTYYNLAITH 116

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             + ++K A   + KAI+L+ ++  A+ +      D  + + AL   +Q + +D +    
Sbjct: 117 ERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQGDPQAALADYKQAIRLDPKNPSV 176

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y+ +G+    +  ++ AI   +  + + P        R + + ++G+ + A+KD+D AL 
Sbjct: 177 YYNQGITYRRIKDNQAAISSFNQAIKLKPDYYSAYNSRGNAFASLGDSQAALKDFDRALQ 236

Query: 648 LELDSMEKF 656
           +   + + +
Sbjct: 237 INPKAADTY 245



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 81/164 (49%)

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           E+GI  ++ +++  A+ DL+  ++L+  +  AY Y G A    G+   A   + +A++++
Sbjct: 43  EQGIQKYEARNYKGAIADLTQAIRLNPNSDIAYGYRGNARDDNGDPTGAIADYQQALKIN 102

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
                 + +L   ++ L + + A+    + + ++  ++ AY  RG L+   G  + A+ D
Sbjct: 103 PQNYTTYYNLAITHERLEDFKAAIANYTKAIELNPSYAAAYENRGNLVDDQGDPQAALAD 162

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
               + +DP N    Y +   Y  I + + AI  ++ A+ L+ D
Sbjct: 163 YKQAIRLDPKNPSVYYNQGITYRRIKDNQAAISSFNQAIKLKPD 206


>gi|427724351|ref|YP_007071628.1| hypothetical protein Lepto7376_2520 [Leptolyngbya sp. PCC 7376]
 gi|427356071|gb|AFY38794.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 324

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 1/216 (0%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+ + T AI+ +PS  +A+ +RG     +G + EAI D ++AL+ + N      +RG++ 
Sbjct: 53  ALFELTTAIRFSPSFADAYYQRGFVHEKMGNTTEAIADYNRALQRDANHEVAYLQRGMLY 112

Query: 494 FKFKDFNAAVEDLSACVK-LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
            K  +   AVED    +  ++  N  A    G A +SIGE   A +    AI L+  F E
Sbjct: 113 AKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGESVLALQDFTGAINLNNRFAE 172

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A+      YQ L N  +A+      + ID      Y  RG +     + K+AI D +  L
Sbjct: 173 AYVERGLVYQRLNNVVQAVADYSMAVEIDPSLVTPYLQRGAIYRQGNRIKEAIADYNFAL 232

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             DP N    YLR       G+Y+ A  DY  A++ 
Sbjct: 233 QNDPENATAYYLRGVAVEQQGQYQAAFTDYSRAIEF 268



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 1/265 (0%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ Q   G Y  A+      ++  P + +A   RG           AI+D+  A+Q + +
Sbjct: 41  GVNQSRLGNYGDALFELTTAIRFSPSFADAYYQRGFVHEKMGNTTEAIADYNRALQRDAN 100

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFKFKDFNAAVEDL 506
              A+ +RG   A  GE+V+A++D  + L    PN+   L  RG       +   A++D 
Sbjct: 101 HEVAYLQRGMLYAKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGESVLALQDF 160

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + L+     AY   GL    +    +A   +  A+++D + +  +      Y+    
Sbjct: 161 TGAINLNNRFAEAYVERGLVYQRLNNVVQAVADYSMAVEIDPSLVTPYLQRGAIYRQGNR 220

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++A+      L  D   + AY+LRG+ +   GQ++ A  D S  +  +         RA
Sbjct: 221 IKEAIADYNFALQNDPENATAYYLRGVAVEQQGQYQAAFTDYSRAIEFNDKIAPAYGNRA 280

Query: 627 SCYHAIGEYREAIKDYDAALDLELD 651
           + Y   GEY  A +DY  A  L LD
Sbjct: 281 NIYAQRGEYAAAKQDYQQAAQLFLD 305



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 3/201 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKE-DPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           L RG+     G+   A+  FD+IL   +P    AL+ RG A A   E   A+ DFT AI 
Sbjct: 106 LQRGMLYAKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGESVLALQDFTGAIN 165

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            N    EA+  RG     L   V+A+ D S A+E +P+      +RG +  +      A+
Sbjct: 166 LNNRFAEAYVERGLVYQRLNNVVQAVADYSMAVEIDPSLVTPYLQRGAIYRQGNRIKEAI 225

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D +  ++ D EN +AY   G+A+   G+Y+ A   + +AI+ +     A+G+    Y  
Sbjct: 226 ADYNFALQNDPENATAYYLRGVAVEQQGQYQAAFTDYSRAIEFNDKIAPAYGNRANIYAQ 285

Query: 564 LANSEKALECLQQV--LYIDK 582
                 A +  QQ   L++D+
Sbjct: 286 RGEYAAAKQDYQQAAQLFLDQ 306



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 106/212 (50%), Gaps = 1/212 (0%)

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G  ++ LG   +A+ +L+ A+ F P+ AD  ++RG V+ K  +   A+ D +  ++ D  
Sbjct: 41  GVNQSRLGNYGDALFELTTAIRFSPSFADAYYQRGFVHEKMGNTTEAIADYNRALQRDAN 100

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQ-LDRNFLEAWGHLTQFYQDLANSEKALECL 574
           ++ AY   G+  +  GE  KA E   + +  ++ N + A     Q +  +  S  AL+  
Sbjct: 101 HEVAYLQRGMLYAKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGESVLALQDF 160

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
              + ++ RF++AY  RGL+   L    +A+ D S  + IDPS +     R + Y     
Sbjct: 161 TGAINLNNRFAEAYVERGLVYQRLNNVVQAVADYSMAVEIDPSLVTPYLQRGAIYRQGNR 220

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            +EAI DY+ AL  + ++   + L+ +A  Q+
Sbjct: 221 IKEAIADYNFALQNDPENATAYYLRGVAVEQQ 252



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 1/143 (0%)

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
           Y G+  S +G Y  A      AI+   +F +A+      ++ + N+ +A+    + L  D
Sbjct: 39  YTGVNQSRLGNYGDALFELTTAIRFSPSFADAYYQRGFVHEKMGNTTEAIADYNRALQRD 98

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG-IDPSNIECLYLRASCYHAIGEYREAIK 640
                AY  RG+L    G+  KA++D    L  I+P+NI  L  R   + +IGE   A++
Sbjct: 99  ANHEVAYLQRGMLYAKAGETVKAVEDFDRILTVINPNNIFALVARGQAFASIGESVLALQ 158

Query: 641 DYDAALDLELDSMEKFVLQCLAF 663
           D+  A++L     E +V + L +
Sbjct: 159 DFTGAINLNNRFAEAYVERGLVY 181


>gi|425460012|ref|ZP_18839498.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           [Microcystis aeruginosa PCC 9808]
 gi|389827371|emb|CCI21411.1| Similar to tr|Q3M7C2|Q3M7C2_ANAVT Protein prenyltransferase
           [Microcystis aeruginosa PCC 9808]
          Length = 944

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 16/271 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N G++  AI+ +D+ L+  P Y EA   RG+A       E AI+ +  A++  
Sbjct: 189 NRGVALGNLGRFEEAIASYDRALEIKPDYYEAWNNRGSALHNLGRFEEAIASYDRALEIK 248

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    +ALE +P+  D  + RGI       F  A+  
Sbjct: 249 PDKHEAWHNRGSALHNLGRFEEAIASWDRALEIKPDYPDAWYGRGIALDDLGRFEQAIAS 308

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +   A+   G+AL  +G +++A  ++ +A+++  +  EAW +  +    L+
Sbjct: 309 YDRALEIKPDKHEAWNNRGVALDDLGRFEQAIASYDRALEIKPDDHEAWYNRGRAVCSLS 368

Query: 566 NSEKALECLQQVLY------IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            +  +   L+ ++Y      ++ R    + LR  L H L Q       +   LG      
Sbjct: 369 KNRVSTPSLEALIYRKPIVALNDREPHIFALREALPH-LIQGSPPWGQIYRYLG------ 421

Query: 620 ECLYLRASCY--HAIGEYREAIKDYDAALDL 648
              YL  S Y  +A   +REAI+ Y  AL +
Sbjct: 422 -EAYLGHSRYKENASPYWREAIRHYQIALPI 451



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 106/229 (46%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           +F   +G  +   G +  AI+ +D+ L+  P   EA   RG A       E AI+ +  A
Sbjct: 151 EFWFVQGYQKYMNGDFIGAIASWDRALEIKPDKHEAWNNRGVALGNLGRFEEAIASYDRA 210

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++  P   EAW  RG A   LG   EAI    +ALE +P+  +  H RG        F  
Sbjct: 211 LEIKPDYYEAWNNRGSALHNLGRFEEAIASYDRALEIKPDKHEAWHNRGSALHNLGRFEE 270

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+      +++  +   A+   G+AL  +G +++A  ++ +A+++  +  EAW +     
Sbjct: 271 AIASWDRALEIKPDYPDAWYGRGIALDDLGRFEQAIASYDRALEIKPDKHEAWNNRGVAL 330

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            DL   E+A+    + L I     +A++ RG  +  L +++ +   L +
Sbjct: 331 DDLGRFEQAIASYDRALEIKPDDHEAWYNRGRAVCSLSKNRVSTPSLEA 379



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 4/221 (1%)

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           +D TE +Q      E W  +G  +   G+ + AI    +ALE +P+  +  + RG+    
Sbjct: 141 TDLTEVVQD----AEFWFVQGYQKYMNGDFIGAIASWDRALEIKPDKHEAWNNRGVALGN 196

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
              F  A+      +++  +   A+   G AL ++G +++A  ++ +A+++  +  EAW 
Sbjct: 197 LGRFEEAIASYDRALEIKPDYYEAWNNRGSALHNLGRFEEAIASYDRALEIKPDKHEAWH 256

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           +      +L   E+A+    + L I   +  A++ RG+ L  LG+ ++AI      L I 
Sbjct: 257 NRGSALHNLGRFEEAIASWDRALEIKPDYPDAWYGRGIALDDLGRFEQAIASYDRALEIK 316

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           P   E    R      +G + +AI  YD AL+++ D  E +
Sbjct: 317 PDKHEAWNNRGVALDDLGRFEQAIASYDRALEIKPDDHEAW 357



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 103/226 (45%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G  +    +   AI+ +  A++  P   EAW  RG A   LG   EAI    +ALE +P
Sbjct: 156 QGYQKYMNGDFIGAIASWDRALEIKPDKHEAWNNRGVALGNLGRFEEAIASYDRALEIKP 215

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           +  +  + RG        F  A+      +++  +   A+   G AL ++G +++A  + 
Sbjct: 216 DYYEAWNNRGSALHNLGRFEEAIASYDRALEIKPDKHEAWHNRGSALHNLGRFEEAIASW 275

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +A+++  ++ +AW        DL   E+A+    + L I     +A++ RG+ L  LG+
Sbjct: 276 DRALEIKPDYPDAWYGRGIALDDLGRFEQAIASYDRALEIKPDKHEAWNNRGVALDDLGR 335

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            ++AI      L I P + E  Y R     ++ + R +    +A +
Sbjct: 336 FEQAIASYDRALEIKPDDHEAWYNRGRAVCSLSKNRVSTPSLEALI 381


>gi|365883408|ref|ZP_09422556.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
           375]
 gi|365288132|emb|CCD95087.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
           375]
          Length = 460

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 110/238 (46%), Gaps = 5/238 (2%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           +RL   + +   G    A +     +  DP   EA   RG     QR L+ A++D+ +AI
Sbjct: 107 YRLRGDLMREAGGDAGKATADLSMAISLDPDDAEAYELRGVVYTGQRRLDRALADYDQAI 166

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +  P   +A+  RG A    G++ +A+QD ++A+  +P+       R     K    + A
Sbjct: 167 RLKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQMDKA 226

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQF 560
           + D    ++ D +    +   GL   S+G+Y KA   + +AI+L    NFL   G   QF
Sbjct: 227 LADDHEAIRRDPKVPEYFDNRGLTYQSLGDYDKAIADYDQAIKLQPKPNFLTNRGDSHQF 286

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
             +L     AL      L +D  F+ AY+ R +L   +G+  KA+ D  + L +DP N
Sbjct: 287 KNELG---AALSDYDAALRLDPNFALAYNNRAVLFRKMGERAKALADYEAALRLDPGN 341



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 3/235 (1%)

Query: 417 ALIGRGTARAFQRE-LEAAISDFTEAIQSNPSAGEAWKRRGQ-ARAALGESVEAIQDLSK 474
           AL+ R  A A     +  A+ D   AI  +     A++ RG   R A G++ +A  DLS 
Sbjct: 71  ALVARADAHARTTGGMTQALRDLDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSM 130

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A+  +P+ A+    RG+V    +  + A+ D    ++L  +   AY   G+A    G+ +
Sbjct: 131 AISLDPDDAEAYELRGVVYTGQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNE 190

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           KA + + +AI+LD +    + +    Y+ L   +KAL    + +  D +  + +  RGL 
Sbjct: 191 KAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQMDKALADDHEAIRRDPKVPEYFDNRGLT 250

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
              LG + KAI D    + + P     L  R   +    E   A+ DYDAAL L+
Sbjct: 251 YQSLGDYDKAIADYDQAIKLQPKP-NFLTNRGDSHQFKNELGAALSDYDAALRLD 304



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 2/246 (0%)

Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
            + D+++E   +A +        IS     +  + L RG+    + +   A++ +DQ ++
Sbjct: 109 LRGDLMREAGGDAGKATADLSMAISLDPDDAEAYEL-RGVVYTGQRRLDRALADYDQAIR 167

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
             P Y +A   RG A   + + E A+ D+ EAI+ +P     +  R  A   LG+  +A+
Sbjct: 168 LKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQMDKAL 227

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
            D  +A+  +P   +    RG+      D++ A+ D    +KL +   +  T  G +   
Sbjct: 228 ADDHEAIRRDPKVPEYFDNRGLTYQSLGDYDKAIADYDQAIKL-QPKPNFLTNRGDSHQF 286

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
             E   A   +  A++LD NF  A+ +    ++ +    KAL   +  L +D     A  
Sbjct: 287 KNELGAALSDYDAALRLDPNFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAAS 346

Query: 590 LRGLLL 595
            R ++L
Sbjct: 347 GRRVML 352



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 1/116 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   + G Y  AI+ +DQ +K  P  P  L  RG +  F+ EL AA+SD+  A++ +
Sbjct: 246 NRGLTYQSLGDYDKAIADYDQAIKLQPK-PNFLTNRGDSHQFKNELGAALSDYDAALRLD 304

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           P+   A+  R      +GE  +A+ D   AL  +P + +    R ++  + K F A
Sbjct: 305 PNFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAASGRRVMLAEIKKFGA 360



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 569 KALECLQQVLYIDKRFSKAYHLRG-LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +AL  L + + +D + ++AY LRG L+    G   KA  DLS  + +DP + E   LR  
Sbjct: 88  QALRDLDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSMAISLDPDDAEAYELRGV 147

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            Y        A+ DYD A+ L+ D  + +  + +AFY
Sbjct: 148 VYTGQRRLDRALADYDQAIRLKPDYAQAYADRGVAFY 184



 Score = 44.7 bits (104), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 33/180 (18%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A    G    A+  +++ ++ DP  P     R  A     +++ A++D  EAI+ +P
Sbjct: 179 RGVAFYLRGDNEKAVQDYNEAIRLDPDRPRTFTNRAAAYKKLGQMDKALADDHEAIRRDP 238

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKA------------------------------- 475
              E +  RG    +LG+  +AI D  +A                               
Sbjct: 239 KVPEYFDNRGLTYQSLGDYDKAIADYDQAIKLQPKPNFLTNRGDSHQFKNELGAALSDYD 298

Query: 476 --LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
             L  +PN A   + R ++  K  +   A+ D  A ++LD  N +A +   + L+ I ++
Sbjct: 299 AALRLDPNFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAASGRRVMLAEIKKF 358



 Score = 40.8 bits (94), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 48/98 (48%)

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           ++ KA   L   + +D   ++AY LRG++  G  +  +A+ D    + + P   +    R
Sbjct: 120 DAGKATADLSMAISLDPDDAEAYELRGVVYTGQRRLDRALADYDQAIRLKPDYAQAYADR 179

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
              ++  G+  +A++DY+ A+ L+ D    F  +  A+
Sbjct: 180 GVAFYLRGDNEKAVQDYNEAIRLDPDRPRTFTNRAAAY 217


>gi|340504470|gb|EGR30909.1| tpr repeat protein [Ichthyophthirius multifiliis]
          Length = 1212

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 121/233 (51%), Gaps = 4/233 (1%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
              RG+A  N  KY  AI  F ++++ +P Y EA I +G +    ++ E ++  + EA+  
Sbjct: 817  FYRGVAFFNIQKYDEAIDSFQKVIEINPDYLEAYIYKGNSFKKLQKYECSLLCYEEALSK 876

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            NP    A+  +G     L +  E+I    + L      A+  +++GI   + K F  A+E
Sbjct: 877  NPEYEIAYFNKGNILIHLQQYQESIFCFEQILSKNIKHAEAHYQKGIALKEQKKFKEAIE 936

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ 562
                 ++++++   AY   G+AL+ I EY+KA + + KAI++++N+ EA+ +  +  F+ 
Sbjct: 937  SFEKAIEINEKYYQAYNNQGIALTEIQEYQKAMKCYEKAIKINKNYAEAYNNKGIILFF- 995

Query: 563  DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
             L     A++C Q+ + I+  FS+AY   G  L+   +++ AI      + I+
Sbjct: 996  -LNEFTDAIKCYQKAIKINSEFSEAYSNIGTALNFQEKYQDAIPCFLKAISIN 1047



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 112/220 (50%), Gaps = 3/220 (1%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             ++G   ++  +Y  +I  F+QIL ++  + EA   +G A   Q++ + AI  F +AI+ 
Sbjct: 885  FNKGNILIHLQQYQESIFCFEQILSKNIKHAEAHYQKGIALKEQKKFKEAIESFEKAIEI 944

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            N    +A+  +G A   + E  +A++   KA++   N A+  + +GI+ F   +F  A++
Sbjct: 945  NEKYYQAYNNQGIALTEIQEYQKAMKCYEKAIKINKNYAEAYNNKGIILFFLNEFTDAIK 1004

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                 +K++ E   AY+ +G AL+   +Y+ A    LKAI ++  +  A+ +    Y  L
Sbjct: 1005 CYQKAIKINSEFSEAYSNIGTALNFQEKYQDAIPCFLKAISINNQYSLAYQNTGVSYFKL 1064

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
            +   KA  C ++   ID+    +Y+    + + L  +K++
Sbjct: 1065 SQFLKAAVCFEKAFQIDQN---SYNSLFFMNYSLNLYKQS 1101



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 149/336 (44%), Gaps = 42/336 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +S+ + ++ +  Y  AIS FDQ LK D    EA   +G      ++ E A   F   I  
Sbjct: 649 VSKALIEIQQ--YEKAISYFDQALKIDQYNIEAQFNKGICLNLIKKFEKASQCFQNIINM 706

Query: 445 NPSAGEAWKRRG----------QARAALGESV------------------------EAIQ 470
            P+  +A+  +G          Q+   L +++                        EAI+
Sbjct: 707 EPNNQKAYLNQGICLKNLFQYQQSLECLNKAILLNENDFQAIFIKAKVLNEIKQYQEAIE 766

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
              +AL+ +  + ++ +  GI  +  + F  A+      ++ ++    AY Y G+A  +I
Sbjct: 767 YYKRALKLDCKNYEVFYSLGISFYNLEQFQEAINYFDETIQFNQSFLEAYFYRGVAFFNI 826

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
            +Y +A ++  K I+++ ++LEA+ +    ++ L   E +L C ++ L  +  +  AY  
Sbjct: 827 QKYDEAIDSFQKVIEINPDYLEAYIYKGNSFKKLQKYECSLLCYEEALSKNPEYEIAYFN 886

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           +G +L  L Q++++I      L  +  + E  Y +        +++EAI+ ++ A+++  
Sbjct: 887 KGNILIHLQQYQESIFCFEQILSKNIKHAEAHYQKGIALKEQKKFKEAIESFEKAIEINE 946

Query: 651 DSMEKFVLQCLAF-----YQKEIALY-TASKINSEF 680
              + +  Q +A      YQK +  Y  A KIN  +
Sbjct: 947 KYYQAYNNQGIALTEIQEYQKAMKCYEKAIKINKNY 982



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/336 (20%), Positives = 149/336 (44%), Gaps = 43/336 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +G      GK+  AIS +DQ ++ + ++ +    +G A  + +    AI  + + I+ 
Sbjct: 475 LQKGDCYFFLGKFLEAISCYDQAIQINEIFQDPFFNKGNAFYYLQNFSEAIKCYQKVIEI 534

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   +++   G +   L +  +A  +  KAL       + L  +G +  + + F  A+ 
Sbjct: 535 NPQDFKSYNNIGNSFQNLKKYKDAAFNYEKALSINKFYIEGLFNKGSLLIEIRSFQEAIN 594

Query: 505 DLSACVKLDKEN-------------------------------KSAY---TYLGL--ALS 528
                +++   N                               +++Y   T++ +  AL 
Sbjct: 595 CYDQILEISNFNVASLYNKGNILFFYLQNYQESIKCYEEIIQKRNSYLLQTFINVSKALI 654

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            I +Y+KA     +A+++D+  +EA  +       +   EKA +C Q ++ ++    KAY
Sbjct: 655 EIQQYEKAISYFDQALKIDQYNIEAQFNKGICLNLIKKFEKASQCFQNIINMEPNNQKAY 714

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             +G+ L  L Q++++++ L+  + ++ ++ + ++++A   + I +Y+EAI+ Y  AL L
Sbjct: 715 LNQGICLKNLFQYQQSLECLNKAILLNENDFQAIFIKAKVLNEIKQYQEAIEYYKRALKL 774

Query: 649 ELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           +  + E        FY   I+ Y   +      +FD
Sbjct: 775 DCKNYE-------VFYSLGISFYNLEQFQEAINYFD 803



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 143/311 (45%), Gaps = 9/311 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G   +N  KY  A   FDQ +  D    E    +G +    +  + AI  + +AI+ N
Sbjct: 138 NKGNIFMNLRKYEEANKCFDQAILLDKQDFECYYNKGNSLTKLKMYKEAIQYYEKAIEIN 197

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  +G    +  ++VEA     KA++  P+  +  + RG + F  K +  A++ 
Sbjct: 198 PNYSNAYFNKGNILISFQKNVEAFIQFEKAIKINPHFFEAYNNRGNILFYQKKYQEAIDS 257

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
              C++++    +AY   G     + +Y+KA   + K I L+ N   A+    +    L 
Sbjct: 258 YQFCIQINPNFPNAYFNQGNVYKILVQYEKAIFCYNKCITLNPNDTSAYYKKGKILNLLK 317

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E A+  L + + ++  F KAY ++  +L    ++  A+  L   + +D  N++ L  +
Sbjct: 318 KYEDAILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILEKVIEVDKQNLKYLIKQ 377

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA--FY---QKEIALYTASKI--NS 678
                 + +Y+ +I  ++    L++  +++ + Q +   +Y   + E AL+   KI  N 
Sbjct: 378 GQLLMKLKQYQNSIDCFEKI--LQIYPLQENIFQYIGKNYYYLEKYEKALFYFEKIVDNK 435

Query: 679 EFCWFDIDGDI 689
           +F  F   G+I
Sbjct: 436 DFDIFFFIGNI 446



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 22/289 (7%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG     + KY  AI  +   ++ +P +P A   +G       + E AI  + + I  N
Sbjct: 240 NRGNILFYQKKYQEAIDSYQFCIQINPNFPNAYFNQGNVYKILVQYEKAIFCYNKCITLN 299

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN-------SADILHERGIVNFKFKD 498
           P+   A+ ++G+    L +  +AI  L KA+   P         A++L  +       + 
Sbjct: 300 PNDTSAYYKKGKILNLLKKYEDAILYLDKAISLNPYFIKAYKIKAEVLKNQ-------RK 352

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ---LDRNFLEAWG 555
           ++ A+  L   +++DK+N       G  L  + +Y+ + +   K +Q   L  N  +  G
Sbjct: 353 YDDALIILEKVIEVDKQNLKYLIKQGQLLMKLKQYQNSIDCFEKILQIYPLQENIFQYIG 412

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
              + Y  L   EKAL   +++  +D +    +   G +L  L + +KAI+       I+
Sbjct: 413 ---KNYYYLEKYEKALFYFEKI--VDNKDFDIFFFIGNILKKLEKFEKAIEYYEKAQLIN 467

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            ++      +  CY  +G++ EAI  YD A+ +     + F  +  AFY
Sbjct: 468 QNDYYIYLQKGDCYFFLGKFLEAISCYDQAIQINEIFQDPFFNKGNAFY 516



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 119/256 (46%), Gaps = 2/256 (0%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           N+ KY  A+ I +++++ D    + LI +G      ++ + +I  F + +Q  P     +
Sbjct: 349 NQRKYDDALIILEKVIEVDKQNLKYLIKQGQLLMKLKQYQNSIDCFEKILQIYPLQENIF 408

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
           +  G+    L +  +A+    K ++      DI    G +  K + F  A+E       +
Sbjct: 409 QYIGKNYYYLEKYEKALFYFEKIVD--NKDFDIFFFIGNILKKLEKFEKAIEYYEKAQLI 466

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           ++ +   Y   G     +G++ +A   + +AIQ++  F + + +    +  L N  +A++
Sbjct: 467 NQNDYYIYLQKGDCYFFLGKFLEAISCYDQAIQINEIFQDPFFNKGNAFYYLQNFSEAIK 526

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
           C Q+V+ I+ +  K+Y+  G     L ++K A  +    L I+   IE L+ + S    I
Sbjct: 527 CYQKVIEINPQDFKSYNNIGNSFQNLKKYKDAAFNYEKALSINKFYIEGLFNKGSLLIEI 586

Query: 633 GEYREAIKDYDAALDL 648
             ++EAI  YD  L++
Sbjct: 587 RSFQEAINCYDQILEI 602



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/306 (18%), Positives = 131/306 (42%), Gaps = 44/306 (14%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  A+  F++I+          IG    +    + E AI  + +A   N +    + ++
Sbjct: 420 KYEKALFYFEKIVDNKDFDIFFFIGNILKKL--EKFEKAIEYYEKAQLINQNDYYIYLQK 477

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     LG+ +EAI    +A++      D    +G   +  ++F+ A++     ++++ +
Sbjct: 478 GDCYFFLGKFLEAISCYDQAIQINEIFQDPFFNKGNAFYYLQNFSEAIKCYQKVIEINPQ 537

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +  +Y  +G +  ++ +YK A   + KA+ +++ ++E   +      ++ + ++A+ C  
Sbjct: 538 DFKSYNNIGNSFQNLKKYKDAAFNYEKALSINKFYIEGLFNKGSLLIEIRSFQEAINCYD 597

Query: 576 QVL---------------------------------YIDKRFSKAYHLRGLL-----LHG 597
           Q+L                                  I KR   +Y L+  +     L  
Sbjct: 598 QILEISNFNVASLYNKGNILFFYLQNYQESIKCYEEIIQKR--NSYLLQTFINVSKALIE 655

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           + Q++KAI      L ID  NIE  + +  C + I ++ +A + +   +++E ++ + ++
Sbjct: 656 IQQYEKAISYFDQALKIDQYNIEAQFNKGICLNLIKKFEKASQCFQNIINMEPNNQKAYL 715

Query: 658 LQ--CL 661
            Q  CL
Sbjct: 716 NQGICL 721


>gi|225621426|ref|YP_002722685.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225216247|gb|ACN84981.1| putative TPR domain-containing protein [Brachyspira hyodysenteriae
           WA1]
          Length = 817

 Score = 92.8 bits (229), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 139/279 (49%), Gaps = 12/279 (4%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A      Y ++I  +++ L+ +P Y  A I  G  +      + AI  + +A++ NP 
Sbjct: 456 GLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPD 515

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+     A  +L +   +++D +KALE   + A+I    G++  +   ++ A+E  +
Sbjct: 516 YSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQAVYDKAIEYYN 575

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD---- 563
             ++++    +AY  +  +LS++ +Y++A E + K I++        G+   +Y+     
Sbjct: 576 KVLEINPNKVNAYYNIAFSLSNMDKYEEALEIYDKVIRM------YPGNFDVYYERGYTK 629

Query: 564 --LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
              +  E+A+     ++ ++ +   AY+ RG     L  +  AIKD    +  + +N + 
Sbjct: 630 YRASKYEEAVRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDGAIKDFDKAIEYNANNSDF 689

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
              RASCY  + +YRE++++YD A++L+ D    ++L+ 
Sbjct: 690 YSERASCYDYLNKYRESVENYDKAIELKDDDWFLYILRA 728



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 128/280 (45%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C+ +I +  +  V       + ++    Y  A+   ++ L  D    E     G    ++
Sbjct: 369 CLNKILEIDNTDVSIYNEIALIKIELELYDEALYYLNKALDIDTNNAEIYNSIGLVYHYK 428

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +  E AI +F +AI+ N S   A+   G A   + +   +IQ  +KALE  P  A     
Sbjct: 429 KNYEEAIRNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYIN 488

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            G++     ++  A++     ++++ +   AY  + LA  S+ +YK + E   KA++L  
Sbjct: 489 LGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGY 548

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           +  E + ++   Y   A  +KA+E   +VL I+     AY+     L  + ++++A++  
Sbjct: 549 DEAEIYINIGLIYSRQAVYDKAIEYYNKVLEINPNKVNAYYNIAFSLSNMDKYEEALEIY 608

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              + + P N +  Y R    +   +Y EA++D+D  +++
Sbjct: 609 DKVIRMYPGNFDVYYERGYTKYRASKYEEAVRDFDIIINV 648



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 144/314 (45%), Gaps = 28/314 (8%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R+ K  +   D R++ G+  +   KY  AI+I+D+++   P    +   RG  + +  + 
Sbjct: 98  RVLKINNNDTDSRVNIGLCYLYMKKYKEAINIYDEVIANFPDNISSYNNRGLCKFYLSQF 157

Query: 432 EAAISDFTEAIQ--SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NS 482
           E AI+DF + I+   N ++  A+   G  +  L E  EA++   KA+E  P       N 
Sbjct: 158 EEAINDFNKVIELDKNDTSSSAYNTIGLCKYNLNEFDEALKCYEKAIEINPNLISAYNNI 217

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           A I H  G+      D+  A+  L+  +++D  N   Y  +      +G   +A E   K
Sbjct: 218 ALIKHSVGL------DY-EALSYLNKALEIDPNNIETYLKIYSIKLELGLENEANEYLNK 270

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
            I++  + +  +  +     D    E++LE L++ L I+  F  AY+     LH L  + 
Sbjct: 271 IIEMHPDDIYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLNN 330

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD-----LELDSMEKFV 657
           +A++ L   L I P++       A  Y  +   + A++DY+ AL      LE+D+ +  +
Sbjct: 331 EALEYLEKALQIYPNS-------ADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVSI 383

Query: 658 LQCLAFYQKEIALY 671
              +A  + E+ LY
Sbjct: 384 YNEIALIKIELELY 397



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 119/262 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S G+    +  Y  AI  F++ ++ +     A    G A     + E +I  + +A++ N
Sbjct: 420 SIGLVYHYKKNYEEAIRNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEIN 479

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+   G  +  LG   EAI    KALE  P+ +   +   +     +D+  ++ED
Sbjct: 480 PQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLED 539

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L  +    Y  +GL  S    Y KA E + K ++++ N + A+ ++     ++ 
Sbjct: 540 FNKALELGYDEAEIYINIGLIYSRQAVYDKAIEYYNKVLEINPNKVNAYYNIAFSLSNMD 599

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+ALE   +V+ +       Y+ RG   +   ++++A++D    + ++  +    Y R
Sbjct: 600 KYEEALEIYDKVIRMYPGNFDVYYERGYTKYRASKYEEAVRDFDIIINVNSKHYNAYYYR 659

Query: 626 ASCYHAIGEYREAIKDYDAALD 647
                 +  Y  AIKD+D A++
Sbjct: 660 GCSKKYLKNYDGAIKDFDKAIE 681



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 119/244 (48%), Gaps = 5/244 (2%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+    +A+Q  P++ + + +    + AL +   A+  L+K LE +     I +E  ++ 
Sbjct: 332 ALEYLEKALQIYPNSADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVSIYNEIALIK 391

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            + + ++ A+  L+  + +D  N   Y  +GL       Y++A     KAI+L+ +   A
Sbjct: 392 IELELYDEALYYLNKALDIDTNNAEIYNSIGLVYHYKKNYEEAIRNFNKAIELNTSMASA 451

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           + ++   Y ++ + E +++   + L I+ +++ AY   GL+ H LG +K+AI      L 
Sbjct: 452 YYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALE 511

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL-----AFYQKEI 668
           I+P      Y  A    ++ +Y+ +++D++ AL+L  D  E ++   L     A Y K I
Sbjct: 512 INPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQAVYDKAI 571

Query: 669 ALYT 672
             Y 
Sbjct: 572 EYYN 575



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 3/208 (1%)

Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
            RG ++   R  E AI DF  AI+    +   +  RG A+  LG   EAI+D  + L+  
Sbjct: 44  NRGLSKLNLRLYEEAIKDFERAIELGDDSETVYYDRGLAKLYLGNYEEAIEDFKRVLKIN 103

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
            N  D     G+     K +  A+      +    +N S+Y   GL    + ++++A   
Sbjct: 104 NNDTDSRVNIGLCYLYMKKYKEAINIYDEVIANFPDNISSYNNRGLCKFYLSQFEEAIND 163

Query: 540 HLKAIQLDRNFL--EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
             K I+LD+N     A+  +     +L   ++AL+C ++ + I+     AY+   L+ H 
Sbjct: 164 FNKVIELDKNDTSSSAYNTIGLCKYNLNEFDEALKCYEKAIEINPNLISAYNNIALIKHS 223

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +G   +A+  L+  L IDP+NIE  YL+
Sbjct: 224 VGLDYEALSYLNKALEIDPNNIET-YLK 250



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 128/261 (49%), Gaps = 18/261 (6%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           R+ E A+S   + ++ + +    +      +  L    EA+  L+KAL+ + N+A+I + 
Sbjct: 361 RDYEGALSCLNKILEIDNTDVSIYNEIALIKIELELYDEALYYLNKALDIDTNNAEIYNS 420

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            G+V    K++  A+ + +  ++L+    SAY  +GLA   + +Y+ + + + KA++++ 
Sbjct: 421 IGLVYHYKKNYEEAIRNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINP 480

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            +  A+ +L     +L N ++A++  ++ L I+  +S AY+   L    L  +K +++D 
Sbjct: 481 QYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDF 540

Query: 609 SSG--LGIDPS----NIECLYLRASCYHAIGEYREAIKD---------YDAALDLELDSM 653
           +    LG D +    NI  +Y R + Y    EY   + +         Y+ A    L +M
Sbjct: 541 NKALELGYDEAEIYINIGLIYSRQAVYDKAIEYYNKVLEINPNKVNAYYNIA--FSLSNM 598

Query: 654 EKFVLQCLAFYQKEIALYTAS 674
           +K+  + L  Y K I +Y  +
Sbjct: 599 DKYE-EALEIYDKVIRMYPGN 618



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/219 (21%), Positives = 101/219 (46%), Gaps = 10/219 (4%)

Query: 365 NKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N K  +    K+  I+ D+ L+     +A+++   Y +++  F++ L+      E  I  
Sbjct: 498 NYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINI 557

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G   + Q   + AI  + + ++ NP+   A+     + + + +  EA++   K +   P 
Sbjct: 558 GLIYSRQAVYDKAIEYYNKVLEINPNKVNAYYNIAFSLSNMDKYEEALEIYDKVIRMYPG 617

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           + D+ +ERG   ++   +  AV D    + ++ ++ +AY Y G +   +  Y  A +   
Sbjct: 618 NFDVYYERGYTKYRASKYEEAVRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDGAIKDFD 677

Query: 542 KAIQLDRN---FL----EAWGHLTQFYQDLANSEKALEC 573
           KAI+ + N   F       + +L ++ + + N +KA+E 
Sbjct: 678 KAIEYNANNSDFYSERASCYDYLNKYRESVENYDKAIEL 716



 Score = 40.8 bits (94), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++RN++KAI +  S+ +  Y I         Y ++  +++ I+  +KAL+++P    AYI
Sbjct: 434 AIRNFNKAIELNTSMASAYYNI------GLAYYEMHDYENSIQYYNKALEINPQYASAYI 487

Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
             G     LG  +EA+  ++K  E
Sbjct: 488 NLGLIKHNLGNYKEAIDYYKKALE 511


>gi|219848309|ref|YP_002462742.1| hypothetical protein Cagg_1399 [Chloroflexus aggregans DSM 9485]
 gi|219542568|gb|ACL24306.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
          Length = 450

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 122/257 (47%), Gaps = 2/257 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y  A++ F + ++  P YP AL  RG   RA +R  E A++DF  A+  NP        
Sbjct: 78  RYEEALTAFSRAIELRPEYPWALGSRGQVWRALRRHHE-ALADFEAALALNPMLAWVHAE 136

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG+   AL    EAI+  ++AL  +P+    L  RGI   + +D+ AA+ D  A + L  
Sbjct: 137 RGETLRALRRLHEAIEAFNQALNIDPDYVWALGHRGIAYRELRDYPAAIADFDAAITLQD 196

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
                Y   G       +++ A     +AI+LD  +  A G     ++ L ++E AL   
Sbjct: 197 TIAWLYAERGETRRLADDFEGALFDLNRAIELDPQYAWALGSRGATFRALGDTEAALADF 256

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L +D  +   Y  RGLL   L +  +A+ D S  L ++P+N+  L  R         
Sbjct: 257 NRALELDPAYEWVYMQRGLLYRNLDRLDEALADFSRVLALNPNNVGALVERGELLRLRRH 316

Query: 635 YREAIKDYDAALDLELD 651
           Y EA+ D+  A++L+ D
Sbjct: 317 YNEALTDFSHAIELQPD 333



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 117/254 (46%), Gaps = 36/254 (14%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +  A+   ++ ++ DP Y  AL  RG T RA   + EAA++DF  A++ +P+    + +R
Sbjct: 215 FEGALFDLNRAIELDPQYAWALGSRGATFRALG-DTEAALADFNRALELDPAYEWVYMQR 273

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L    EA+ D S+ L   PN+   L ERG +    + +N A+ D S  ++L  +
Sbjct: 274 GLLYRNLDRLDEALADFSRVLALNPNNVGALVERGELLRLRRHYNEALTDFSHAIELQPD 333

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +         A+ S G+  +A                    L ++++ LA+   ALE   
Sbjct: 334 H-------AWAIGSRGQVYRA--------------------LNRYHEALADFNNALEQKP 366

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            +++I     + Y L       L Q+ +A++D +  L + P++   L  R + Y A+  +
Sbjct: 367 DLVWILAERGETYRL-------LHQYNEALEDFNRALELQPNDSWVLSRRGATYQALKIF 419

Query: 636 REAIKDYDAALDLE 649
            EA  D   A++++
Sbjct: 420 EEAYIDLTRAIEID 433



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 2/171 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG+   N  +   A++ F ++L  +P    AL+ RG     +R    A++DF+ AI+ 
Sbjct: 271 MQRGLLYRNLDRLDEALADFSRVLALNPNNVGALVERGELLRLRRHYNEALTDFSHAIEL 330

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RGQ   AL    EA+ D + ALE +P+   IL ERG        +N A+E
Sbjct: 331 QPDHAWAIGSRGQVYRALNRYHEALADFNNALEQKPDLVWILAERGETYRLLHQYNEALE 390

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
           D +  ++L   +    +  G    ++  +++A     +AI++D N   AW 
Sbjct: 391 DFNRALELQPNDSWVLSRRGATYQALKIFEEAYIDLTRAIEIDPN--NAWA 439



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 48/264 (18%)

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +Q   EAA++DF  AI  +P    A+ +RGQ    LG   E++ DL +A E EPN A   
Sbjct: 7   YQDRREAALADFNRAIAIDPDYAWAYFQRGQVLRELGRMEESLADLRRACELEPNDAAYH 66

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ- 545
            ERG      + +  A+   S  ++L  E    Y +   AL S G+  +A   H +A+  
Sbjct: 67  AERGETLRLMRRYEEALTAFSRAIELRPE----YPW---ALGSRGQVWRALRRHHEALAD 119

Query: 546 ----LDRNFLEAWGHLT--QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL- 598
               L  N + AW H    +  + L    +A+E   Q L ID  +  A   RG+    L 
Sbjct: 120 FEAALALNPMLAWVHAERGETLRALRRLHEAIEAFNQALNIDPDYVWALGHRGIAYRELR 179

Query: 599 --------------------------GQHKK-------AIKDLSSGLGIDPSNIECLYLR 625
                                     G+ ++       A+ DL+  + +DP     L  R
Sbjct: 180 DYPAAIADFDAAITLQDTIAWLYAERGETRRLADDFEGALFDLNRAIELDPQYAWALGSR 239

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
            + + A+G+   A+ D++ AL+L+
Sbjct: 240 GATFRALGDTEAALADFNRALELD 263



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 131/294 (44%), Gaps = 11/294 (3%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  F+Q L  DP Y  AL  RG A    R+  AAI+DF  AI    +    +  RG+ R
Sbjct: 150 AIEAFNQALNIDPDYVWALGHRGIAYRELRDYPAAIADFDAAITLQDTIAWLYAERGETR 209

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
               +   A+ DL++A+E +P  A  L  RG       D  AA+ D +  ++LD   +  
Sbjct: 210 RLADDFEGALFDLNRAIELDPQYAWALGSRGATFRALGDTEAALADFNRALELDPAYEWV 269

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   GL   ++    +A     + + L+ N + A     +  +   +  +AL      + 
Sbjct: 270 YMQRGLLYRNLDRLDEALADFSRVLALNPNNVGALVERGELLRLRRHYNEALTDFSHAIE 329

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           +    + A   RG +   L ++ +A+ D ++ L   P  +  L  R   Y  + +Y EA+
Sbjct: 330 LQPDHAWAIGSRGQVYRALNRYHEALADFNNALEQKPDLVWILAERGETYRLLHQYNEAL 389

Query: 640 KDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG--DIDP 691
           +D++ A  LEL   + +VL       +  A Y A KI  E  + D+    +IDP
Sbjct: 390 EDFNRA--LELQPNDSWVL------SRRGATYQALKIFEE-AYIDLTRAIEIDP 434



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 102/243 (41%), Gaps = 12/243 (4%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG      R  E A++ F+ AI+  P    A   RGQ   AL    EA+ D   AL   P
Sbjct: 69  RGETLRLMRRYEEALTAFSRAIELRPEYPWALGSRGQVWRALRRHHEALADFEAALALNP 128

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
             A +  ERG      +  + A+E  +  + +D +   A  + G+A   + +Y  A    
Sbjct: 129 MLAWVHAERGETLRALRRLHEAIEAFNQALNIDPDYVWALGHRGIAYRELRDYPAAIADF 188

Query: 541 LKAIQLDRNFLEAW-----GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
             AI L      AW     G   +   D    E AL  L + + +D +++ A   RG   
Sbjct: 189 DAAITLQDTI--AWLYAERGETRRLADDF---EGALFDLNRAIELDPQYAWALGSRGATF 243

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDYDAALDLELDSME 654
             LG  + A+ D +  L +DP+  E +Y+ R   Y  +    EA+ D+   L L  +++ 
Sbjct: 244 RALGDTEAALADFNRALELDPA-YEWVYMQRGLLYRNLDRLDEALADFSRVLALNPNNVG 302

Query: 655 KFV 657
             V
Sbjct: 303 ALV 305



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 34/247 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG      G   +A++ F++ L+ DP Y    + RG        L+ A++DF+  +  N
Sbjct: 238 SRGATFRALGDTEAALADFNRALELDPAYEWVYMQRGLLYRNLDRLDEALADFSRVLALN 297

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A   RG+         EA+ D S A+E +P+ A  +  RG V      ++ A+ D
Sbjct: 298 PNNVGALVERGELLRLRRHYNEALTDFSHAIELQPDHAWAIGSRGQVYRALNRYHEALAD 357

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +    E K    ++   L+  GE  +                     L Q+ + L 
Sbjct: 358 FNNAL----EQKPDLVWI---LAERGETYRL--------------------LHQYNEALE 390

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           +  +ALE      ++  R       RG     L   ++A  DL+  + IDP+N   L  R
Sbjct: 391 DFNRALELQPNDSWVLSR-------RGATYQALKIFEEAYIDLTRAIEIDPNNAWALAQR 443

Query: 626 ASCYHAI 632
            S +  +
Sbjct: 444 GSLFRQM 450


>gi|296126827|ref|YP_003634079.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296018643|gb|ADG71880.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 211

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 112/222 (50%), Gaps = 34/222 (15%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
            ++ + A+  F +AI+ NP+  +++  RG ++  L +  EA++D ++A+E +PN      
Sbjct: 18  NKDYKNALEVFDKAIELNPNYAKSYLYRGVSKLLLSQKEEALEDFNRAIELDPN------ 71

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
                                C K        Y Y G+ + ++    +A +   KAI+LD
Sbjct: 72  ---------------------CAKF-------YFYRGINMVALNMDIEALKDFDKAIELD 103

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            N+++A+ H       L  +E+A+    +V+ +D  FS+AY+LRG+   GL  HKK ++D
Sbjct: 104 SNYVKAYLHRGLSKLVLNKNEEAISDFNKVIELDANFSEAYYLRGISKFGLDMHKKGMED 163

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +   + ++P N    +LR S    + + +EA+KD++   ++E
Sbjct: 164 IDKVIELNPDNPFAYFLRGSIKKKLNKNKEALKDFEKYEEME 205



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 34/221 (15%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            +   N   Y +A+ +FD+ ++ +P Y ++ + RG ++    + E A+ DF  AI+ +P+
Sbjct: 12  AVTYYNNKDYKNALEVFDKAIELNPNYAKSYLYRGVSKLLLSQKEEALEDFNRAIELDPN 71

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             + +  RG    AL   +EA++D  KA+E + N       RG+          A+ D +
Sbjct: 72  CAKFYFYRGINMVALNMDIEALKDFDKAIELDSNYVKAYLHRGLSKLVLNKNEEAISDFN 131

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++LD     AY   G++   +  +KK  E   K I+L+                    
Sbjct: 132 KVIELDANFSEAYYLRGISKFGLDMHKKGMEDIDKVIELNP------------------- 172

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
                        D  F  AY LRG +   L ++K+A+KD 
Sbjct: 173 -------------DNPF--AYFLRGSIKKKLNKNKEALKDF 198



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 66/136 (48%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           F   RGI  V       A+  FD+ ++ D  Y +A + RG ++    + E AISDF + I
Sbjct: 75  FYFYRGINMVALNMDIEALKDFDKAIELDSNYVKAYLHRGLSKLVLNKNEEAISDFNKVI 134

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + + +  EA+  RG ++  L    + ++D+ K +E  P++      RG +  K      A
Sbjct: 135 ELDANFSEAYYLRGISKFGLDMHKKGMEDIDKVIELNPDNPFAYFLRGSIKKKLNKNKEA 194

Query: 503 VEDLSACVKLDKENKS 518
           ++D     +++K+  S
Sbjct: 195 LKDFEKYEEMEKQKSS 210



 Score = 49.3 bits (116), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/173 (22%), Positives = 85/173 (49%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           ++  +  +  KD+  A+E     ++L+     +Y Y G++   + + ++A E   +AI+L
Sbjct: 9   YKEAVTYYNNKDYKNALEVFDKAIELNPNYAKSYLYRGVSKLLLSQKEEALEDFNRAIEL 68

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           D N  + + +       L    +AL+   + + +D  + KAY  RGL    L ++++AI 
Sbjct: 69  DPNCAKFYFYRGINMVALNMDIEALKDFDKAIELDSNYVKAYLHRGLSKLVLNKNEEAIS 128

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
           D +  + +D +  E  YLR      +  +++ ++D D  ++L  D+   + L+
Sbjct: 129 DFNKVIELDANFSEAYYLRGISKFGLDMHKKGMEDIDKVIELNPDNPFAYFLR 181



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 67/131 (51%)

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           +YK A E   KAI+L+ N+ +++ +       L+  E+ALE   + + +D   +K Y  R
Sbjct: 20  DYKNALEVFDKAIELNPNYAKSYLYRGVSKLLLSQKEEALEDFNRAIELDPNCAKFYFYR 79

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G+ +  L    +A+KD    + +D + ++    R      + +  EAI D++  ++L+ +
Sbjct: 80  GINMVALNMDIEALKDFDKAIELDSNYVKAYLHRGLSKLVLNKNEEAISDFNKVIELDAN 139

Query: 652 SMEKFVLQCLA 662
             E + L+ ++
Sbjct: 140 FSEAYYLRGIS 150



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG++++   K   AIS F+++++ D  + EA   RG ++      +  + D  + I+ 
Sbjct: 111 LHRGLSKLVLNKNEEAISDFNKVIELDANFSEAYYLRGISKFGLDMHKKGMEDIDKVIEL 170

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           NP    A+  RG  +  L ++ EA++D  K  E E   + I
Sbjct: 171 NPDNPFAYFLRGSIKKKLNKNKEALKDFEKYEEMEKQKSSI 211



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 14/134 (10%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLC------SLRNWSKAIRILDSLLAQS 66
           LN   + + + D+ + +DS    A   R  L+KL       ++ +++K I  LD+  +++
Sbjct: 86  LNMDIEALKDFDKAIELDSNYVKAYLHR-GLSKLVLNKNEEAISDFNKVIE-LDANFSEA 143

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
           Y ++ I         L++HK  + D DK ++L+P    AY L+G     L + +EAL  +
Sbjct: 144 YYLRGISKFG-----LDMHKKGMEDIDKVIELNPDNPFAYFLRGSIKKKLNKNKEALKDF 198

Query: 127 EKGYEHALHQSADL 140
           EK YE    Q + +
Sbjct: 199 EK-YEEMEKQKSSI 211


>gi|374815102|ref|ZP_09718839.1| chaperone protein DnaJ [Treponema primitia ZAS-1]
          Length = 489

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 123/263 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  N   + +A++   + ++ +P Y  A + RG     +++ + AI+D+TEAI+ +
Sbjct: 225 ARGEAAYNHKNWDTALNEISEAIRINPNYVNAYVARGVVYERKQDYDHAIADYTEAIKLD 284

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    +  RG A     +   AI D + A+  +PN A+    RGIV    +D++ A+ D
Sbjct: 285 PNYAGTYFNRGNAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYGYKQDYDHAIAD 344

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L  +  SAY+   +  +   +Y  A   + +AI+LD N+   + +    Y    
Sbjct: 345 FTEAIRLKPDYTSAYSNRAVTYNKKQDYDHAIADYTEAIRLDPNYAGTYFNRGIAYGYKQ 404

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + + A+    + + +   ++ AY+ RG        +  AI D +  + + P   +    R
Sbjct: 405 DYDHAIADYTEAIRLKPDYTDAYNNRGGAYGYKQDYDHAIADFTEAIRLKPDYTDAYNNR 464

Query: 626 ASCYHAIGEYREAIKDYDAALDL 648
            + Y A G    A  DY  A  L
Sbjct: 465 GNVYKAKGAQSLAAADYAMAKQL 487



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/229 (22%), Positives = 105/229 (45%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           V+  ++RG+    +  Y  AI+ + + +K DP Y      RG A   +++ + AI+D+T 
Sbjct: 254 VNAYVARGVVYERKQDYDHAIADYTEAIKLDPNYAGTYFNRGNAYEGKQDYDHAIADYTM 313

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI+ +P+       RG       +   AI D ++A+  +P+       R +   K +D++
Sbjct: 314 AIRLDPNYANTHVVRGIVYGYKQDYDHAIADFTEAIRLKPDYTSAYSNRAVTYNKKQDYD 373

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+ D +  ++LD      Y   G+A     +Y  A   + +AI+L  ++ +A+ +    
Sbjct: 374 HAIADYTEAIRLDPNYAGTYFNRGIAYGYKQDYDHAIADYTEAIRLKPDYTDAYNNRGGA 433

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           Y    + + A+    + + +   ++ AY+ RG +    G    A  D +
Sbjct: 434 YGYKQDYDHAIADFTEAIRLKPDYTDAYNNRGNVYKAKGAQSLAAADYA 482



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 104/236 (44%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG A    +  + A+++ +EAI+ NP+   A+  RG       +   AI D ++A++ +P
Sbjct: 226 RGEAAYNHKNWDTALNEISEAIRINPNYVNAYVARGVVYERKQDYDHAIADYTEAIKLDP 285

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A     RG      +D++ A+ D +  ++LD    + +   G+      +Y  A    
Sbjct: 286 NYAGTYFNRGNAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYGYKQDYDHAIADF 345

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI+L  ++  A+ +    Y    + + A+    + + +D  ++  Y  RG+       
Sbjct: 346 TEAIRLKPDYTSAYSNRAVTYNKKQDYDHAIADYTEAIRLDPNYAGTYFNRGIAYGYKQD 405

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           +  AI D +  + + P   +    R   Y    +Y  AI D+  A+ L+ D  + +
Sbjct: 406 YDHAIADYTEAIRLKPDYTDAYNNRGGAYGYKQDYDHAIADFTEAIRLKPDYTDAY 461



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 5/201 (2%)

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           E   N A I + RG   +  K+++ A+ ++S  ++++    +AY   G+      +Y  A
Sbjct: 214 ELFVNDAKIHYARGEAAYNHKNWDTALNEISEAIRINPNYVNAYVARGVVYERKQDYDHA 273

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
              + +AI+LD N+   + +    Y+   + + A+      + +D  ++  + +RG++  
Sbjct: 274 IADYTEAIKLDPNYAGTYFNRGNAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYG 333

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
               +  AI D +  + + P        RA  Y+   +Y  AI DY  A+ L+ +    +
Sbjct: 334 YKQDYDHAIADFTEAIRLKPDYTSAYSNRAVTYNKKQDYDHAIADYTEAIRLDPNYAGTY 393

Query: 657 VLQCLAF-----YQKEIALYT 672
             + +A+     Y   IA YT
Sbjct: 394 FNRGIAYGYKQDYDHAIADYT 414



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 25/144 (17%)

Query: 22  EIDELVRVDSVMASAITARIELAKL-----CSLRNWSKAIRILDSLLAQSYEIQDICNRA 76
           EI E +R++    +A  AR  + +       ++ ++++AI+ LD   A +Y      NR 
Sbjct: 242 EISEAIRINPNYVNAYVARGVVYERKQDYDHAIADYTEAIK-LDPNYAGTY-----FNRG 295

Query: 77  FCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHALHQ 136
             Y   + + H I D   A++LDP     ++++G  +            +++ Y+HA+  
Sbjct: 296 NAYEGKQDYDHAIADYTMAIRLDPNYANTHVVRGIVYG-----------YKQDYDHAI-- 342

Query: 137 SADLKQFLELEELLTAAKQDRSVT 160
            AD  + + L+   T+A  +R+VT
Sbjct: 343 -ADFTEAIRLKPDYTSAYSNRAVT 365


>gi|434403706|ref|YP_007146591.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
 gi|428257961|gb|AFZ23911.1| tetratricopeptide repeat protein [Cylindrospermum stagnale PCC
           7417]
          Length = 422

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 147/337 (43%), Gaps = 43/337 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +  +  Y  AI+ FDQ ++E+P++  A + RG A      +  A+SD+TEA++ N
Sbjct: 7   NRGLEKAKQKDYDGAIAEFDQAIRENPVFDTAYLQRGLAYYESGAILQAVSDYTEALKLN 66

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EA+  R  AR  L     A++D+ KA++   N A     RG+V  K      A+ +
Sbjct: 67  SQNVEAYYYRALARVDLKNLPGALEDVEKAIKLNLNYAAAYSLRGVVRRKEGYIQDAIAN 126

Query: 506 LSACVKL-----DKEN---------------KSAYTYLGLALSSI---GEY-----KKAE 537
                +L     DKEN               K A T +   +++I   G+Y      KAE
Sbjct: 127 FKKAAELYLQEKDKENCRLCLDNIKQLQPPEKPAPTPITATVATIRSTGDYFTQLLDKAE 186

Query: 538 EAHLKAIQLDRNF-LEAWGHLTQFY-------QDLANSEKALECLQQVLYIDKRFSKAYH 589
           +   +    D N+ L+A     Q Y         + N  +A+      L +    +  Y 
Sbjct: 187 KGDTREAIADLNWVLQADPQDAQAYCCRGVVRCKMGNYREAIADFNSALQLKFTDAIVYR 246

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            RG     LG H  AI D +  + I P +      R + + A+G+Y  A+KDY  AL + 
Sbjct: 247 NRGKARSQLGDHLGAIADFNQAIEIQPDDTLVYIARGNVFRAMGDYLGAMKDYTQALQIN 306

Query: 650 LDSMEKFVLQCLAF-----YQKEIALYTASKINSEFC 681
            D  + +  + +A+      QK IA +   K  S FC
Sbjct: 307 ADDAQAYYNRGIAYTFLEELQKAIADF--QKAASIFC 341



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 63/125 (50%)

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
           D  + RG+   K KD++ A+ +    ++ +    +AY   GLA    G   +A   + +A
Sbjct: 3   DEFYNRGLEKAKQKDYDGAIAEFDQAIRENPVFDTAYLQRGLAYYESGAILQAVSDYTEA 62

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
           ++L+   +EA+ +      DL N   ALE +++ + ++  ++ AY LRG++    G  + 
Sbjct: 63  LKLNSQNVEAYYYRALARVDLKNLPGALEDVEKAIKLNLNYAAAYSLRGVVRRKEGYIQD 122

Query: 604 AIKDL 608
           AI + 
Sbjct: 123 AIANF 127


>gi|392411116|ref|YP_006447723.1| putative N-acetylglucosaminyl transferase [Desulfomonile tiedjei
           DSM 6799]
 gi|390624252|gb|AFM25459.1| putative N-acetylglucosaminyl transferase [Desulfomonile tiedjei
           DSM 6799]
          Length = 513

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 113/250 (45%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI ++ ++L  DP    A   RG A   + + E A +DF +A+Q +P   EA+  RG+  
Sbjct: 47  AIQLYSKVLGSDPNNARAYFNRGAAYRSKGQNEKAFADFNQAVQKDPGLAEAFFARGEYY 106

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
                  +A+QD S+ L    +   +   +G        F AA+ DL   ++ + ++  A
Sbjct: 107 RQRSMFDKAVQDFSRTLTINKDYPGVHRVKGEAELGLGQFQAAISDLDIALRSNADDSDA 166

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G+A  ++     +     +AI+L+    +A   L         +E+AL+   +VL 
Sbjct: 167 YFLRGVAHQNLKSLAASLSDFNRAIELNPQNTKALFKLGNILFSEGKTEQALDAYNRVLK 226

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           +D +   A   RG    GLG ++ AI+DL+  L I+P     L  RA  Y        A+
Sbjct: 227 LDPKNVDALTNRGWAKRGLGDYQGAIEDLTQSLKINPKLALALSNRAQLYTQTNRIDAAV 286

Query: 640 KDYDAALDLE 649
            DY   L ++
Sbjct: 287 ADYTQLLSIK 296



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 126/270 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG A  ++G+   A + F+Q +++DP   EA   RG     +   + A+ DF+  +  
Sbjct: 66  FNRGAAYRSKGQNEKAFADFNQAVQKDPGLAEAFFARGEYYRQRSMFDKAVQDFSRTLTI 125

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N       + +G+A   LG+   AI DL  AL    + +D    RG+ +   K   A++ 
Sbjct: 126 NKDYPGVHRVKGEAELGLGQFQAAISDLDIALRSNADDSDAYFLRGVAHQNLKSLAASLS 185

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++L+ +N  A   LG  L S G+ ++A +A+ + ++LD   ++A  +     + L
Sbjct: 186 DFNRAIELNPQNTKALFKLGNILFSEGKTEQALDAYNRVLKLDPKNVDALTNRGWAKRGL 245

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + + A+E L Q L I+ + + A   R  L     +   A+ D +  L I  ++   L+ 
Sbjct: 246 GDYQGAIEDLTQSLKINPKLALALSNRAQLYTQTNRIDAAVADYTQLLSIKGADPGILFA 305

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSME 654
           R      + +  EA  D+  AL  E D  E
Sbjct: 306 RGKLLLELKKPAEAETDFTRALQDEPDRPE 335



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 34/263 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A  N    A+++S F++ ++ +P   +AL   G     + + E A+  +   ++ +P
Sbjct: 170 RGVAHQNLKSLAASLSDFNRAIELNPQNTKALFKLGNILFSEGKTEQALDAYNRVLKLDP 229

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A   RG A+  LG+   AI+DL+++L+  P  A  L  R  +  +    +AAV D 
Sbjct: 230 KNVDALTNRGWAKRGLGDYQGAIEDLTQSLKINPKLALALSNRAQLYTQTNRIDAAVADY 289

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + +   +       G  L    E KK  EA                  T F + L +
Sbjct: 290 TQLLSIKGADPGILFARGKLLL---ELKKPAEAE-----------------TDFTRALQD 329

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
                E L+            Y  R  L+    ++ +AI DL+S L IDP+++E L  RA
Sbjct: 330 EPDRPEILE------------YRARARLMA--KKYNEAIADLNSILKIDPADVEALLARA 375

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
             + A   Y EAI DY  A+ L+
Sbjct: 376 QAHEAESHYNEAIADYREAIRLD 398



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 2/246 (0%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
              R+ K    +VD   +RG A+   G Y  AI    Q LK +P    AL  R       
Sbjct: 220 AYNRVLKLDPKNVDALTNRGWAKRGLGDYQGAIEDLTQSLKINPKLALALSNRAQLYTQT 279

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
             ++AA++D+T+ +    +       RG+    L +  EA  D ++AL+ EP+  +IL  
Sbjct: 280 NRIDAAVADYTQLLSIKGADPGILFARGKLLLELKKPAEAETDFTRALQDEPDRPEILEY 339

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD- 547
           R       K +N A+ DL++ +K+D  +  A      A  +   Y +A   + +AI+LD 
Sbjct: 340 RARARLMAKKYNEAIADLNSILKIDPADVEALLARAQAHEAESHYNEAIADYREAIRLDA 399

Query: 548 -RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
            +  +EA   L + +      ++A+    +V+ ++     A+  RG+ L   G    A +
Sbjct: 400 EKAGVEAQYGLAKNFLMNNQLDQAITQFSKVIELEPSHGLAWANRGVALKQKGDLASAAE 459

Query: 607 DLSSGL 612
           D    L
Sbjct: 460 DFRKAL 465



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 74/151 (49%)

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           + + A++  S  +  D  N  AY   G A  S G+ +KA     +A+Q D    EA+   
Sbjct: 43  NLDKAIQLYSKVLGSDPNNARAYFNRGAAYRSKGQNEKAFADFNQAVQKDPGLAEAFFAR 102

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
            ++Y+  +  +KA++   + L I+K +   + ++G    GLGQ + AI DL   L  +  
Sbjct: 103 GEYYRQRSMFDKAVQDFSRTLTINKDYPGVHRVKGEAELGLGQFQAAISDLDIALRSNAD 162

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + +  +LR   +  +     ++ D++ A++L
Sbjct: 163 DSDAYFLRGVAHQNLKSLAASLSDFNRAIEL 193



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 41/86 (47%)

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           N +KA++   +VL  D   ++AY  RG      GQ++KA  D +  +  DP   E  + R
Sbjct: 43  NLDKAIQLYSKVLGSDPNNARAYFNRGAAYRSKGQNEKAFADFNQAVQKDPGLAEAFFAR 102

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
              Y     + +A++D+   L +  D
Sbjct: 103 GEYYRQRSMFDKAVQDFSRTLTINKD 128


>gi|406982865|gb|EKE04132.1| hypothetical protein ACD_20C00104G0026 [uncultured bacterium]
          Length = 356

 Score = 92.8 bits (229), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 125/255 (49%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GK   ++  + ++L  D +  +AL+  G+      +++ AI ++ +AI+ NP +  A+  
Sbjct: 40  GKLEESLKTYRELLSIDSVNVQALVNIGSTLFLMGKVDEAIDNYKKAIELNPESVSAYMN 99

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
                A +G+  EAI+   K++E  P++ D     G+     + ++ A+E+  + +KLD 
Sbjct: 100 LANTYAEIGKYDEAIEGYKKSIEISPDNIDAYSSLGLAFQDLRKYDEAMENYRSALKLDP 159

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           EN   Y  +        +++ A E + KA+  + N  ++   +     +L    K+ E  
Sbjct: 160 ENYEHYVNVASVYMQKTQFEDAIEFYKKAVNFNNNDYKSLICIANALSELKKYNKSFEYY 219

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           Q+ L +   ++KA+   G+ L   G  KKAI++    + +DP+N     + A+     G 
Sbjct: 220 QKALAVKPDYAKAHLCYGISLSESGNIKKAIEEYRKVIELDPTNSRGYMILANILVEEGL 279

Query: 635 YREAIKDYDAALDLE 649
           Y EA+ +Y  A++L+
Sbjct: 280 YDEAVDNYKKAIELD 294



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 101/222 (45%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           EL   I    + IQ  P   EA+   G   A  G+  E+++   + L  +  +   L   
Sbjct: 7   ELNKVIEGARKKIQETPDNVEAYFVLGTTLALSGKLEESLKTYRELLSIDSVNVQALVNI 66

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G   F     + A+++    ++L+ E+ SAY  L    + IG+Y +A E + K+I++  +
Sbjct: 67  GSTLFLMGKVDEAIDNYKKAIELNPESVSAYMNLANTYAEIGKYDEAIEGYKKSIEISPD 126

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
            ++A+  L   +QDL   ++A+E  +  L +D    + Y     +     Q + AI+   
Sbjct: 127 NIDAYSSLGLAFQDLRKYDEAMENYRSALKLDPENYEHYVNVASVYMQKTQFEDAIEFYK 186

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
             +  + ++ + L   A+    + +Y ++ + Y  AL ++ D
Sbjct: 187 KAVNFNNNDYKSLICIANALSELKKYNKSFEYYQKALAVKPD 228



 Score = 43.1 bits (100), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 92/211 (43%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           ++D   S G+A  +  KY  A+  +   LK DP   E  +   +    + + E AI  + 
Sbjct: 127 NIDAYSSLGLAFQDLRKYDEAMENYRSALKLDPENYEHYVNVASVYMQKTQFEDAIEFYK 186

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +A+  N +  ++      A + L +  ++ +   KAL  +P+ A      GI   +  + 
Sbjct: 187 KAVNFNNNDYKSLICIANALSELKKYNKSFEYYQKALAVKPDYAKAHLCYGISLSESGNI 246

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+E+    ++LD  N   Y  L   L   G Y +A + + KAI+LD   + A+  +  
Sbjct: 247 KKAIEEYRKVIELDPTNSRGYMILANILVEEGLYDEAVDNYKKAIELDNTNVLAYVAIGN 306

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
            +      E+AL+  +Q   ID    + Y +
Sbjct: 307 TFVLTDKLEEALKYYRQASQIDPDNDEIYMI 337



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%)

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           E  K  E   K IQ   + +EA+  L          E++L+  +++L ID    +A    
Sbjct: 7   ELNKVIEGARKKIQETPDNVEAYFVLGTTLALSGKLEESLKTYRELLSIDSVNVQALVNI 66

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G  L  +G+  +AI +    + ++P ++      A+ Y  IG+Y EAI+ Y  ++++  D
Sbjct: 67  GSTLFLMGKVDEAIDNYKKAIELNPESVSAYMNLANTYAEIGKYDEAIEGYKKSIEISPD 126

Query: 652 SMEKFVLQCLAF 663
           +++ +    LAF
Sbjct: 127 NIDAYSSLGLAF 138


>gi|354568673|ref|ZP_08987836.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
 gi|353539927|gb|EHC09407.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
           JSC-11]
          Length = 422

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 155/347 (44%), Gaps = 55/347 (15%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF  +RG+A+  +  YA AI+ F + ++ +P + +A   RG A     E+  A+SD+TEA
Sbjct: 4   DF-YNRGLARAKQKDYAGAIAEFTRAIEINPHFADAFCQRGLAYYDSGEILLAVSDYTEA 62

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +Q N  + EA+  R  AR AL     A+ D ++ +    N A   + RGI+  K    + 
Sbjct: 63  LQLNTESVEAYYCRALARVALKNFPGALADANQVIRLNRNHAAAYNLRGIIYRKMGRVHD 122

Query: 502 AVED--LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL----DRNFLEAWG 555
           A+ +  L+A + L +++K       L L  I + +  +  +L  +Q      +  +    
Sbjct: 123 AIANFKLAADLYLQQKDKDN---CRLCLEKIKQLQPKQ--NLTVVQQRPTPTKPIMSPQE 177

Query: 556 HLTQFYQ--DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG---------------- 597
           + TQ  +  +  ++ +ALE L  VL +D + ++AY  RG++ +                 
Sbjct: 178 YFTQLLEKAEKGDTRQALEDLNWVLQVDPQDAQAYCCRGVVRYKQGNYREAIADFNQALQ 237

Query: 598 ------------------LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
                             LG H+ AI D +  L I P +      R + Y A+G Y  A+
Sbjct: 238 LNFQDAIVYRNRGRTRFQLGDHQGAITDFNQALQIKPEDALLYIARGNVYRAMGNYVSAV 297

Query: 640 KDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYTASKINSEFC 681
            DY  AL +  D  + +  + LA+      Q+ IA Y  +   S FC
Sbjct: 298 TDYTKALQINPDDPQAYYNRGLAYAHMEEMQRAIADYQQAA--SIFC 342



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 1/177 (0%)

Query: 361 EAKRNKKFCVTRISKSKSI-SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
           + K+N      R + +K I S     ++ + +  +G    A+   + +L+ DP   +A  
Sbjct: 154 QPKQNLTVVQQRPTPTKPIMSPQEYFTQLLEKAEKGDTRQALEDLNWVLQVDPQDAQAYC 213

Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
            RG  R  Q     AI+DF +A+Q N      ++ RG+ R  LG+   AI D ++AL+ +
Sbjct: 214 CRGVVRYKQGNYREAIADFNQALQLNFQDAIVYRNRGRTRFQLGDHQGAITDFNQALQIK 273

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           P  A +   RG V     ++ +AV D +  ++++ ++  AY   GLA + + E ++A
Sbjct: 274 PEDALLYIARGNVYRAMGNYVSAVTDYTKALQINPDDPQAYYNRGLAYAHMEEMQRA 330



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 61/125 (48%)

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
           D  + RG+   K KD+  A+ + +  ++++     A+   GLA    GE   A   + +A
Sbjct: 3   DDFYNRGLARAKQKDYAGAIAEFTRAIEINPHFADAFCQRGLAYYDSGEILLAVSDYTEA 62

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
           +QL+   +EA+         L N   AL    QV+ +++  + AY+LRG++   +G+   
Sbjct: 63  LQLNTESVEAYYCRALARVALKNFPGALADANQVIRLNRNHAAAYNLRGIIYRKMGRVHD 122

Query: 604 AIKDL 608
           AI + 
Sbjct: 123 AIANF 127


>gi|226949281|ref|YP_002804372.1| hypothetical protein CLM_2200 [Clostridium botulinum A2 str. Kyoto]
 gi|226841728|gb|ACO84394.1| tetratricopeptide repeat family protein [Clostridium botulinum A2
           str. Kyoto]
          Length = 251

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 34/221 (15%)

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +  +++  I  +T +I+  PS  +A+  R +    LGE  ++I D +K LE  P   D  
Sbjct: 34  YSYDIKDKIKFYTISIKLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCY 93

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + R IV +  K+++ +++DL   V +DK  K+ Y   G+    I +YK+A     KAI  
Sbjct: 94  NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIH- 152

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
                          +DLA+SE                  AY  R    + L ++  +IK
Sbjct: 153 ---------------EDLADSE------------------AYENRAFTYYNLKKYSSSIK 179

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           D ++ L + P N      R + Y+ I  Y +AI DY  AL+
Sbjct: 180 DYTNALKLTPENKNIYLSRGTIYYKIKNYEDAISDYMKALN 220



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 63/119 (52%)

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +GEY K+   + K ++L+    + + +    Y  + N +K+L+ L  ++ +DK +   Y 
Sbjct: 69  LGEYNKSIADYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYF 128

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            RG++  G+  +K+A  + +  +  D ++ E    RA  Y+ + +Y  +IKDY  AL L
Sbjct: 129 NRGMVFLGIEDYKRAAIEFTKAIHEDLADSEAYENRAFTYYNLKKYSSSIKDYTNALKL 187



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 60/135 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I       Y  ++   D ++  D  Y      RG       + + A  +FT+AI  +
Sbjct: 95  NRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHED 154

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  EA++ R      L +   +I+D + AL+  P + +I   RG + +K K++  A+ D
Sbjct: 155 LADSEAYENRAFTYYNLKKYSSSIKDYTNALKLTPENKNIYLSRGTIYYKIKNYEDAISD 214

Query: 506 LSACVKLDKENKSAY 520
               +   +++ S Y
Sbjct: 215 YMKALNCKEKDPSFY 229



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/225 (20%), Positives = 93/225 (41%), Gaps = 10/225 (4%)

Query: 322 NTNSESYSKSSISDNK-SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSIS 380
           N N    +K S+  NK  S++ +  S   + +D+        K   KF    I K K   
Sbjct: 5   NFNEFKLAKKSVKKNKYESNAEKFFSNAYYSYDI--------KDKIKFYTISI-KLKPSF 55

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D   +R       G+Y  +I+ +++IL+ +P   +    R       +  + ++ D   
Sbjct: 56  IDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDV 115

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            +  +      +  RG     + +   A  + +KA+  +   ++    R    +  K ++
Sbjct: 116 LVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDLADSEAYENRAFTYYNLKKYS 175

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           ++++D +  +KL  ENK+ Y   G     I  Y+ A   ++KA+ 
Sbjct: 176 SSIKDYTNALKLTPENKNIYLSRGTIYYKIKNYEDAISDYMKALN 220


>gi|440684825|ref|YP_007159620.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428681944|gb|AFZ60710.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 279

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 64/216 (29%), Positives = 111/216 (51%), Gaps = 2/216 (0%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R++ + S + +F + +G  Q  +G   +AI+ + + +  +  Y  A   RG A       
Sbjct: 51  RLTANTSKAGEFYI-QGQNQHAKGNSEAAIAAYSKSISLNSQYAPAFKSRGLAYFDAGNK 109

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI+D+ +A++ NP+ GE +  RG ARA+LG+   AI D ++A+   PN A+  + RG 
Sbjct: 110 EGAIADYNQALRLNPNDGETYNNRGNARASLGDQQAAIADYNEAIRLAPNYAEAFNNRGN 169

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                 D N AV D +  +++D+    AY   G    + G+ +KA   + +AI+L+ NF 
Sbjct: 170 ARSAQGDKNGAVADYTEAIRIDQNYSVAYNNRGNTYFAQGDQQKAIADYNQAIRLNPNFG 229

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYI-DKRFSK 586
            A+ +       + +   AL+ LQ+   I DK  +K
Sbjct: 230 PAFNNRGNALAAIGDKRGALQDLQRAAAIFDKEGNK 265



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 51/183 (27%), Positives = 88/183 (48%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           EAAI+ ++++I  N     A+K RG A    G    AI D ++AL   PN  +  + RG 
Sbjct: 76  EAAIAAYSKSISLNSQYAPAFKSRGLAYFDAGNKEGAIADYNQALRLNPNDGETYNNRGN 135

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                 D  AA+ D +  ++L      A+   G A S+ G+   A   + +AI++D+N+ 
Sbjct: 136 ARASLGDQQAAIADYNEAIRLAPNYAEAFNNRGNARSAQGDKNGAVADYTEAIRIDQNYS 195

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A+ +    Y    + +KA+    Q + ++  F  A++ RG  L  +G  + A++DL   
Sbjct: 196 VAYNNRGNTYFAQGDQQKAIADYNQAIRLNPNFGPAFNNRGNALAAIGDKRGALQDLQRA 255

Query: 612 LGI 614
             I
Sbjct: 256 AAI 258



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/204 (25%), Positives = 94/204 (46%)

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           + +N S    +  +GQ + A G S  AI   SK++      A     RG+  F   +   
Sbjct: 52  LTANTSKAGEFYIQGQNQHAKGNSEAAIAAYSKSISLNSQYAPAFKSRGLAYFDAGNKEG 111

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D +  ++L+  +   Y   G A +S+G+ + A   + +AI+L  N+ EA+ +     
Sbjct: 112 AIADYNQALRLNPNDGETYNNRGNARASLGDQQAAIADYNEAIRLAPNYAEAFNNRGNAR 171

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
               +   A+    + + ID+ +S AY+ RG      G  +KAI D +  + ++P+    
Sbjct: 172 SAQGDKNGAVADYTEAIRIDQNYSVAYNNRGNTYFAQGDQQKAIADYNQAIRLNPNFGPA 231

Query: 622 LYLRASCYHAIGEYREAIKDYDAA 645
              R +   AIG+ R A++D   A
Sbjct: 232 FNNRGNALAAIGDKRGALQDLQRA 255



 Score = 45.8 bits (107), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 48/92 (52%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            NSE A+    + + ++ +++ A+  RGL     G  + AI D +  L ++P++ E    
Sbjct: 73  GNSEAAIAAYSKSISLNSQYAPAFKSRGLAYFDAGNKEGAIADYNQALRLNPNDGETYNN 132

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           R +   ++G+ + AI DY+ A+ L  +  E F
Sbjct: 133 RGNARASLGDQQAAIADYNEAIRLAPNYAEAF 164


>gi|392966968|ref|ZP_10332386.1| Tetratricopeptide repeat protein 6 Short=TPR repeat protein 6
           [Fibrisoma limi BUZ 3]
 gi|387843765|emb|CCH54434.1| Tetratricopeptide repeat protein 6 Short=TPR repeat protein 6
           [Fibrisoma limi BUZ 3]
          Length = 445

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 123/248 (49%), Gaps = 1/248 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A+ N   +  AI  +D+ ++ +     A + RG +++ Q +   A+ DF+ AI+ N
Sbjct: 65  NRGLAKANLKDHRGAILDYDRAIELNAKDALAYLSRGVSKSKQDDHRGALLDFSRAIELN 124

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   + +  RG +R+ L +   A+ D SK +E EPN+A  L+ RGI   K +D+  ++ D
Sbjct: 125 PDDPQTYYSRGVSRSRLEQHRGALADFSKTIELEPNNALALYARGITKQKLEDYAGSLAD 184

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  ++++     A+   G++   + +Y  A      AI+L     E++ +       L 
Sbjct: 185 FSKVLEMNPRRAQAFAGRGVSKLELKDYTGAIADLNSAIELGPEDAESYYYRGFAKAKLD 244

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC-LYL 624
           + + AL    + L ++    +AY+ RG     LG  K AI+D ++ +  + SN +  +Y 
Sbjct: 245 DYKGALADYNRTLTLNGDNFRAYYGRGFCRSKLGDQKGAIQDFNTAIEANNSNTDAKVYY 304

Query: 625 RASCYHAI 632
                 AI
Sbjct: 305 NGKITRAI 312



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 128/285 (44%), Gaps = 36/285 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+++    ++  A++ F + ++ +P    AL  RG  +    +   +++DF++ ++ N
Sbjct: 133 SRGVSRSRLEQHRGALADFSKTIELEPNNALALYARGITKQKLEDYAGSLADFSKVLEMN 192

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG ++  L +   AI DL+ A+E  P  A+  + RG    K  D+  A+ D
Sbjct: 193 PRRAQAFAGRGVSKLELKDYTGAIADLNSAIELGPEDAESYYYRGFAKAKLDDYKGALAD 252

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ---------------LDRNF 550
            +  + L+ +N  AY   G   S +G+ K A +    AI+               + R  
Sbjct: 253 YNRTLTLNGDNFRAYYGRGFCRSKLGDQKGAIQDFNTAIEANNSNTDAKVYYNGKITRAI 312

Query: 551 LEAWGHLTQ---------------FYQDLANSEK------ALECLQQVLYIDKRFSKAYH 589
           L+   +L Q               +Y    +  K      A+  L + + +   +++AY 
Sbjct: 313 LDNLRNLVQERNKINDLSDERAEAYYSRAVSKNKQGDAKAAIVDLNKAIELSPTYAEAYF 372

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
             G++    G  K A+ DL+S + ++P   E  Y+R    HA+G+
Sbjct: 373 TLGMIKSAQGDQKGAVMDLNSAIKLNPRYAEVYYVRGIIKHALGD 417



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/268 (22%), Positives = 120/268 (44%), Gaps = 1/268 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           + DF    GI +   G +  A+  F   +  +P    +   RG A+A  ++   AI D+ 
Sbjct: 26  AADF-FENGITRSKTGDFTGALQAFSMAITMNPENAASYYNRGLAKANLKDHRGAILDYD 84

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            AI+ N     A+  RG +++   +   A+ D S+A+E  P+     + RG+   + +  
Sbjct: 85  RAIELNAKDALAYLSRGVSKSKQDDHRGALLDFSRAIELNPDDPQTYYSRGVSRSRLEQH 144

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ D S  ++L+  N  A    G+    + +Y  +     K ++++    +A+     
Sbjct: 145 RGALADFSKTIELEPNNALALYARGITKQKLEDYAGSLADFSKVLEMNPRRAQAFAGRGV 204

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +L +   A+  L   + +    +++Y+ RG     L  +K A+ D +  L ++  N 
Sbjct: 205 SKLELKDYTGAIADLNSAIELGPEDAESYYYRGFAKAKLDDYKGALADYNRTLTLNGDNF 264

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALD 647
              Y R  C   +G+ + AI+D++ A++
Sbjct: 265 RAYYGRGFCRSKLGDQKGAIQDFNTAIE 292



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 113/270 (41%), Gaps = 38/270 (14%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI +     YA +++ F ++L+ +P   +A  GRG ++   ++   AI+D   AI+  
Sbjct: 167 ARGITKQKLEDYAGSLADFSKVLEMNPRRAQAFAGRGVSKLELKDYTGAIADLNSAIELG 226

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E++  RG A+A L +   A+ D ++ L    ++    + RG    K  D   A++D
Sbjct: 227 PEDAESYYYRGFAKAKLDDYKGALADYNRTLTLNGDNFRAYYGRGFCRSKLGDQKGAIQD 286

Query: 506 LSACVKLDKENKSAYTYLGLALSSI----------------------------------- 530
            +  ++ +  N  A  Y    ++                                     
Sbjct: 287 FNTAIEANNSNTDAKVYYNGKITRAILDNLRNLVQERNKINDLSDERAEAYYSRAVSKNK 346

Query: 531 -GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
            G+ K A     KAI+L   + EA+  L        + + A+  L   + ++ R+++ Y+
Sbjct: 347 QGDAKAAIVDLNKAIELSPTYAEAYFTLGMIKSAQGDQKGAVMDLNSAIKLNPRYAEVYY 406

Query: 590 LRGLLLHGLGQHKKAIKDLSSG--LGIDPS 617
           +RG++ H LG       DLS    LG  PS
Sbjct: 407 VRGIIKHALGDENGGCLDLSKAGELGYTPS 436



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 8/180 (4%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           SA    E GI   K  DF  A++  S  + ++ EN ++Y   GLA +++ +++ A   + 
Sbjct: 25  SAADFFENGITRSKTGDFTGALQAFSMAITMNPENAASYYNRGLAKANLKDHRGAILDYD 84

Query: 542 KAIQLDRNFLEAWGHLTQFY----QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           +AI+L  N  +A  +L++      QD  +   AL    + + ++    + Y+ RG+    
Sbjct: 85  RAIEL--NAKDALAYLSRGVSKSKQD--DHRGALLDFSRAIELNPDDPQTYYSRGVSRSR 140

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           L QH+ A+ D S  + ++P+N   LY R      + +Y  ++ D+   L++     + F 
Sbjct: 141 LEQHRGALADFSKTIELEPNNALALYARGITKQKLEDYAGSLADFSKVLEMNPRRAQAFA 200


>gi|325281840|ref|YP_004254382.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
           splanchnicus DSM 20712]
 gi|324313649|gb|ADY34202.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
           splanchnicus DSM 20712]
          Length = 652

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 122/257 (47%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y SAI  F+ I++  P   E    RG A+    + E AI D+++AI+ NP+   A+  RG
Sbjct: 40  YISAIDNFNNIIRVKPYLSEPYFFRGLAKLNLDDYEGAIQDYSKAIELNPNYFHAYMYRG 99

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            A   L +  EA+ D ++A+  EP  A +   RGI   +  DF AA +D S  + +D + 
Sbjct: 100 VAWHNLRKYEEAMADYAQAIALEPRDAYVYANRGITEAEMGDFKAAEKDYSKALMIDSKL 159

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
            +AY    +    + +++ A      AI+L+    +A+G     +        A+E   +
Sbjct: 160 VAAYLNRAVVREKLDDWEGAMADCSSAIRLNMFSDDAFGLRGYLWFQHKEYHNAIEDFNR 219

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L  +    +    R ++ + + ++ + + D S  + ID + I   Y RA     +GE  
Sbjct: 220 ALKANPENKRILMSRAMVWYEMKKYPEVLNDYSEVIRIDSNYIYAYYNRAMLRAEVGEKN 279

Query: 637 EAIKDYDAALDLELDSM 653
            AI+D D  +++  D++
Sbjct: 280 AAIRDLDKVVEMNPDNI 296



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 124/271 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++N   Y  AI  + + ++ +P Y  A + RG A    R+ E A++D+ +AI   P
Sbjct: 64  RGLAKLNLDDYEGAIQDYSKAIELNPNYFHAYMYRGVAWHNLRKYEEAMADYAQAIALEP 123

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG   A +G+   A +D SKAL  +         R +V  K  D+  A+ D 
Sbjct: 124 RDAYVYANRGITEAEMGDFKAAEKDYSKALMIDSKLVAAYLNRAVVREKLDDWEGAMADC 183

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S+ ++L+  +  A+   G       EY  A E   +A++ +             + ++  
Sbjct: 184 SSAIRLNMFSDDAFGLRGYLWFQHKEYHNAIEDFNRALKANPENKRILMSRAMVWYEMKK 243

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             + L    +V+ ID  +  AY+ R +L   +G+   AI+DL   + ++P NI   + R 
Sbjct: 244 YPEVLNDYSEVIRIDSNYIYAYYNRAMLRAEVGEKNAAIRDLDKVVEMNPDNILIYFNRG 303

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                I ++  A  D+  ++ L  D ++ ++
Sbjct: 304 LLKMDIRDWYGAYDDFTESIHLYPDFVKAYL 334



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/230 (20%), Positives = 94/230 (40%), Gaps = 34/230 (14%)

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           R GQ      + + AI + +  +  +P  ++    RG+      D+  A++D S  ++L+
Sbjct: 29  RMGQNAIYFDDYISAIDNFNNIIRVKPYLSEPYFFRGLAKLNLDDYEGAIQDYSKAIELN 88

Query: 514 KENKSAYTYLGLAL----------------------------------SSIGEYKKAEEA 539
                AY Y G+A                                   + +G++K AE+ 
Sbjct: 89  PNYFHAYMYRGVAWHNLRKYEEAMADYAQAIALEPRDAYVYANRGITEAEMGDFKAAEKD 148

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
           + KA+ +D   + A+ +     + L + E A+      + ++     A+ LRG L     
Sbjct: 149 YSKALMIDSKLVAAYLNRAVVREKLDDWEGAMADCSSAIRLNMFSDDAFGLRGYLWFQHK 208

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           ++  AI+D +  L  +P N   L  RA  ++ + +Y E + DY   + ++
Sbjct: 209 EYHNAIEDFNRALKANPENKRILMSRAMVWYEMKKYPEVLNDYSEVIRID 258



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 85/170 (50%)

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
           F D+ +A+++ +  +++       Y + GLA  ++ +Y+ A + + KAI+L+ N+  A+ 
Sbjct: 37  FDDYISAIDNFNNIIRVKPYLSEPYFFRGLAKLNLDDYEGAIQDYSKAIELNPNYFHAYM 96

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           +    + +L   E+A+    Q + ++ R +  Y  RG+    +G  K A KD S  L ID
Sbjct: 97  YRGVAWHNLRKYEEAMADYAQAIALEPRDAYVYANRGITEAEMGDFKAAEKDYSKALMID 156

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
              +     RA     + ++  A+ D  +A+ L + S + F L+   ++Q
Sbjct: 157 SKLVAAYLNRAVVREKLDDWEGAMADCSSAIRLNMFSDDAFGLRGYLWFQ 206



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 13/185 (7%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E+ + + T  I     A +A+  RG       E  +AI+DLS  LE EP++   L     
Sbjct: 465 ESYVEELTGRIMQTGDA-DAYLIRGSIYLNQKEYAKAIEDLSAILEKEPDNLLALFNLAN 523

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                 D+  +V+D    +  +++           +    +Y +  E + + +++D +F+
Sbjct: 524 ARMLMFDYIESVDDKIPRIVGEQQQ----------MQRKIDYSQVIEGYNECLRIDPDFV 573

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A  ++   Y      E+A+E   QVL +DK  ++AY  RGLL    GQ   A  DLS  
Sbjct: 574 FALFNMANVYAKNGEIERAIETFNQVLRLDKDIAEAYFNRGLLYIYTGQKALANADLSKA 633

Query: 612 --LGI 614
             LGI
Sbjct: 634 GELGI 638



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 67/150 (44%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG      +E   AI DF  A+++NP        R      + +  E + D S+ +  + 
Sbjct: 200 RGYLWFQHKEYHNAIEDFNRALKANPENKRILMSRAMVWYEMKKYPEVLNDYSEVIRIDS 259

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N     + R ++  +  + NAA+ DL   V+++ +N   Y   GL    I ++  A +  
Sbjct: 260 NYIYAYYNRAMLRAEVGEKNAAIRDLDKVVEMNPDNILIYFNRGLLKMDIRDWYGAYDDF 319

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
            ++I L  +F++A+       Q+L + E A
Sbjct: 320 TESIHLYPDFVKAYLARAAVNQELKDFEAA 349



 Score = 48.5 bits (114), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 54/121 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +SR +      KY   ++ + ++++ D  Y  A   R   RA   E  AAI D  + ++ 
Sbjct: 232 MSRAMVWYEMKKYPEVLNDYSEVIRIDSNYIYAYYNRAMLRAEVGEKNAAIRDLDKVVEM 291

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP     +  RG  +  + +   A  D ++++   P+       R  VN + KDF AA +
Sbjct: 292 NPDNILIYFNRGLLKMDIRDWYGAYDDFTESIHLYPDFVKAYLARAAVNQELKDFEAADK 351

Query: 505 D 505
           D
Sbjct: 352 D 352



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 4/108 (3%)

Query: 380 SVDFRLSRGIAQVNEGK----YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           SVD ++ R + +  + +    Y+  I  +++ L+ DP +  AL       A   E+E AI
Sbjct: 534 SVDDKIPRIVGEQQQMQRKIDYSQVIEGYNECLRIDPDFVFALFNMANVYAKNGEIERAI 593

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
             F + ++ +    EA+  RG      G+   A  DLSKA E    SA
Sbjct: 594 ETFNQVLRLDKDIAEAYFNRGLLYIYTGQKALANADLSKAGELGIVSA 641


>gi|328542500|ref|YP_004302609.1| O-linked GlcNAc transferase [Polymorphum gilvum SL003B-26A1]
 gi|326412247|gb|ADZ69310.1| Probable O-linked GlcNAc transferase protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 273

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 56/162 (34%), Positives = 84/162 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R + +   G+  +AI+ +D+ L+  P Y  AL+GRG       +   A+ DF   I+ N
Sbjct: 96  NRALVERRRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRN 155

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            S   A+  RG    A G    AI+D + A+   PN+A+    RGI      D NAA+ D
Sbjct: 156 SSDARAFHNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAALSD 215

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           LS  V LDK + SA+   G+AL  +G+   A+  + +AI LD
Sbjct: 216 LSDAVNLDKNSASAWANRGIALEMLGKKNDAQRNYNRAIGLD 257



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/219 (25%), Positives = 98/219 (44%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I+    ++  +P   +A   RG A      L+ A+ DF  A++ +PS+ +A+  R     
Sbjct: 43  IASLTAVITANPADAQAYNTRGIAYGRAGRLDKALEDFNTALRLDPSSYQAYANRALVER 102

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
             G+   AI D  +AL  +P+    L  RG    +   +  A+ D    ++ +  +  A+
Sbjct: 103 RRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRNSSDARAF 162

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +  A E    AI L+ N  E +      Y  + +   AL  L   + +
Sbjct: 163 HNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAALSDLSDAVNL 222

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           DK  + A+  RG+ L  LG+   A ++ +  +G+D SN+
Sbjct: 223 DKNSASAWANRGIALEMLGKKNDAQRNYNRAIGLDGSNV 261



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 86/184 (46%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  L+  +   P  A   + RGI   +    + A+ED +  ++LD  +  AY    L   
Sbjct: 43  IASLTAVITANPADAQAYNTRGIAYGRAGRLDKALEDFNTALRLDPSSYQAYANRALVER 102

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
             G+ + A   + +A+++  ++  A       Y+ L    +AL     V+  +   ++A+
Sbjct: 103 RRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRNSSDARAF 162

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           H RGL+    G H  AI+D ++ +G++P+  E    R   Y AI +   A+ D   A++L
Sbjct: 163 HNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAALSDLSDAVNL 222

Query: 649 ELDS 652
           + +S
Sbjct: 223 DKNS 226



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/135 (31%), Positives = 60/135 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG      G+YA A+  FD +++ +     A   RG     Q     AI DF  AI  
Sbjct: 129 VGRGNTYRQLGQYAQALRDFDTVIRRNSSDARAFHNRGLIYQAQGLHAFAIEDFATAIGL 188

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+A E +  RG +  A+ +   A+ DLS A+  + NSA     RGI        N A  
Sbjct: 189 NPNAAEPYIARGISYLAINDPNAALSDLSDAVNLDKNSASAWANRGIALEMLGKKNDAQR 248

Query: 505 DLSACVKLDKENKSA 519
           + +  + LD  N  A
Sbjct: 249 NYNRAIGLDGSNVVA 263



 Score = 52.4 bits (124), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 76/164 (46%)

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           +A +  L+A +  +  +  AY   G+A    G   KA E    A++LD +  +A+ +   
Sbjct: 40  DANIASLTAVITANPADAQAYNTRGIAYGRAGRLDKALEDFNTALRLDPSSYQAYANRAL 99

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             +     + A+    + L +   +  A   RG     LGQ+ +A++D  + +  + S+ 
Sbjct: 100 VERRRGQMQNAIADYDRALRVKPDYDVALVGRGNTYRQLGQYAQALRDFDTVIRRNSSDA 159

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
              + R   Y A G +  AI+D+  A+ L  ++ E ++ + +++
Sbjct: 160 RAFHNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISY 203



 Score = 45.8 bits (107), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 5/99 (5%)

Query: 558 TQFYQDL-----ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           ++ Y D+     A S+  +  L  V+  +   ++AY+ RG+     G+  KA++D ++ L
Sbjct: 25  SEIYNDVPIDRAAGSDANIASLTAVITANPADAQAYNTRGIAYGRAGRLDKALEDFNTAL 84

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            +DPS+ +    RA      G+ + AI DYD AL ++ D
Sbjct: 85  RLDPSSYQAYANRALVERRRGQMQNAIADYDRALRVKPD 123



 Score = 39.7 bits (91), Expect = 8.2,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 3/114 (2%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLAQ-SYEIQ 70
           R  +    I + D  +RV      A+  R    +   L  +++A+R  D+++ + S + +
Sbjct: 103 RRGQMQNAIADYDRALRVKPDYDVALVGRGNTYR--QLGQYAQALRDFDTVIRRNSSDAR 160

Query: 71  DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALS 124
              NR   Y    LH   I D   A+ L+P   + YI +G ++ A+     ALS
Sbjct: 161 AFHNRGLIYQAQGLHAFAIEDFATAIGLNPNAAEPYIARGISYLAINDPNAALS 214


>gi|443661142|ref|ZP_21132694.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           DIANCHI905]
 gi|159027046|emb|CAO89232.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
 gi|443332373|gb|ELS46985.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           DIANCHI905]
          Length = 970

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 131/290 (45%), Gaps = 24/290 (8%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G++  AI+ +D+ L+  P + EA   RG A       E AI+ +  A++  
Sbjct: 215 NRGIALRNLGRFEQAIASYDRALEFKPDFHEAWTNRGLALKNLGRYEEAIASYDRALEIK 274

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A   LG   EAI    +ALE +P+  +  + RGI       F  A+  
Sbjct: 275 PDCHEAWYNRGIALHNLGRFAEAIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIAS 334

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  +   A+   G+AL ++G +++A  +  +A++   +  EAW +       L+
Sbjct: 335 WDRALEIKPDYHEAWNNRGIALGNLGRFEQAIASFDRALEFKPDLHEAWNNRGTAVCSLS 394

Query: 566 NSEKALECLQQVLY------IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            +  +   L+ ++Y      ++ R    + LR  L H L Q       +   LG      
Sbjct: 395 KNRISTPSLEALIYRKPIVALNDREPHIFALREALPH-LIQGSPPWGQIYRYLG------ 447

Query: 620 ECLYLRASCY--HAIGEYREAIKDYDAAL------DLELDSMEKFVLQCL 661
              YL  S Y  +A   +REAI+ Y  AL      D   D +E  +LQ L
Sbjct: 448 -EAYLGHSQYKENASPYWREAIRHYQIALPILSEKDFPEDHLE--ILQGL 494



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 11/220 (5%)

Query: 364 RNKKFCVTRISKSKSISV----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
           + K     R+S + +  +    +F   +G  +V  G +  AI+ +DQ L+  P   +A  
Sbjct: 155 QGKTSTTQRLSTANNTPIVQDAEFWFEQGYQKVINGDFIGAIASYDQALEIKPDLHQAWY 214

Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
            RG A       E AI+ +  A++  P   EAW  RG A   LG   EAI    +ALE +
Sbjct: 215 NRGIALRNLGRFEQAIASYDRALEFKPDFHEAWTNRGLALKNLGRYEEAIASYDRALEIK 274

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           P+  +  + RGI       F  A+      +++  +   A+   G+AL ++G +++A  +
Sbjct: 275 PDCHEAWYNRGIALHNLGRFAEAIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIAS 334

Query: 540 HLKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALE 572
             +A+++  ++ EAW       G+L +F Q +A+ ++ALE
Sbjct: 335 WDRALEIKPDYHEAWNNRGIALGNLGRFEQAIASFDRALE 374



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 98/208 (47%)

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E W  +G  +   G+ + AI    +ALE +P+     + RGI       F  A+     
Sbjct: 176 AEFWFEQGYQKVINGDFIGAIASYDQALEIKPDLHQAWYNRGIALRNLGRFEQAIASYDR 235

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++   +   A+T  GLAL ++G Y++A  ++ +A+++  +  EAW +      +L    
Sbjct: 236 ALEFKPDFHEAWTNRGLALKNLGRYEEAIASYDRALEIKPDCHEAWYNRGIALHNLGRFA 295

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+    Q L I   + +A++ RG+ LH LG+ ++AI      L I P   E    R   
Sbjct: 296 EAIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIASWDRALEIKPDYHEAWNNRGIA 355

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKF 656
              +G + +AI  +D AL+ + D  E +
Sbjct: 356 LGNLGRFEQAIASFDRALEFKPDLHEAW 383



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 99/218 (45%), Gaps = 7/218 (3%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           A+   E+G       DF  A+      +++  +   A+   G+AL ++G +++A  ++ +
Sbjct: 176 AEFWFEQGYQKVINGDFIGAIASYDQALEIKPDLHQAWYNRGIALRNLGRFEQAIASYDR 235

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           A++   +F EAW +     ++L   E+A+    + L I     +A++ RG+ LH LG+  
Sbjct: 236 ALEFKPDFHEAWTNRGLALKNLGRYEEAIASYDRALEIKPDCHEAWYNRGIALHNLGRFA 295

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           +AI      L I P   E  Y R    H +G + +AI  +D AL+++ D  E       A
Sbjct: 296 EAIASYDQALEIKPDYHEAWYNRGIALHNLGRFEQAIASWDRALEIKPDYHE-------A 348

Query: 663 FYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           +  + IAL    +       FD   +  P   E W  R
Sbjct: 349 WNNRGIALGNLGRFEQAIASFDRALEFKPDLHEAWNNR 386


>gi|384210214|ref|YP_005595934.1| hypothetical protein Bint_2760 [Brachyspira intermedia PWS/A]
 gi|343387864|gb|AEM23354.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
          Length = 800

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 141/292 (48%), Gaps = 9/292 (3%)

Query: 388 GIAQVNEGKYASAISIFDQILK-EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           G+ +   G Y  AI+ + +I++  D +Y  +   R  A       E A++D++ AI+ NP
Sbjct: 295 GLLEYKLGNYKEAINYYTKIIEINDDIYY-SYYNRALAEESLELYEDALADYSRAIELNP 353

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               ++  RG  +  +    EA++D +KA+E E N A + + R ++  +   +  A+ED 
Sbjct: 354 EDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDF 413

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + L  E+   Y Y GL  S + E  +A +   KAI+LD  ++ A+      +    +
Sbjct: 414 DKAISLYSEDAEFYYYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIHYRNTD 473

Query: 567 SEKALECLQQVLYIDKRFSKA-YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            + A++  ++V+ +D     A YHL  L    L +++ A+K  S  + +DP+  +  Y R
Sbjct: 474 YKSAIKDFKKVIELDNESVYANYHL-ALSYDALEEYETALKYYSRVIELDPTTPDPYYNR 532

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIALYT 672
           A     +  Y EAI+D+   ++++   M+ +         L  +QK I  YT
Sbjct: 533 ALAEIEMELYNEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYT 584



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 12/283 (4%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I+ +    VD   +RG++  N  KY  AI  FD++++  P    A   RG ++++  + E
Sbjct: 74  INTTHDTLVDVYYNRGLSYFNLKKYEEAIKDFDKVIELSPDKSNAYYNRGHSKSYLGQYE 133

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
             I DF + ++ N    EA    G     LG   EAI++   +L  +    D  + RG  
Sbjct: 134 EGIKDFKKVLEFNEDDAEAIYYIGLGYFYLGRYEEAIKNFDISLLLDDEIDDAYYYRGHS 193

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
                 +  A+ D +  ++L  ++  +Y   GL    +G Y+ A     KAI+LD N+  
Sbjct: 194 KRYLNMYEEALSDFNKVIQLRDDDSDSYYSKGLTEFFLGLYEDAINDFDKAIELDGNYSN 253

Query: 553 AW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           A+         L  + + + + +KALE   +           Y+  GLL + LG +K+AI
Sbjct: 254 AYYFRGLTKNSLELYKEAMDDYKKALEYADE-----DNIISIYNDMGLLEYKLGNYKEAI 308

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              +  + I+       Y RA    ++  Y +A+ DY  A++L
Sbjct: 309 NYYTKIIEINDDIYYSYYNRALAEESLELYEDALADYSRAIEL 351



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 132/276 (47%), Gaps = 2/276 (0%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+     G+Y  AI  FD  L  D    +A   RG ++ +    E A+SDF + IQ    
Sbjct: 157 GLGYFYLGRYEEAIKNFDISLLLDDEIDDAYYYRGHSKRYLNMYEEALSDFNKVIQLRDD 216

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +++  +G     LG   +AI D  KA+E + N ++  + RG+     + +  A++D  
Sbjct: 217 DSDSYYSKGLTEFFLGLYEDAINDFDKAIELDGNYSNAYYFRGLTKNSLELYKEAMDDYK 276

Query: 508 ACVKLDKENK--SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             ++   E+   S Y  +GL    +G YK+A   + K I+++ +   ++ +     + L 
Sbjct: 277 KALEYADEDNIISIYNDMGLLEYKLGNYKEAINYYTKIIEINDDIYYSYYNRALAEESLE 336

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E AL    + + ++   + +Y+ RGL+ + +  + +A++D +  + ++ ++      R
Sbjct: 337 LYEDALADYSRAIELNPEDTYSYNNRGLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNR 396

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           A     +  Y+EAI+D+D A+ L  +  E +  + L
Sbjct: 397 ALLKGRMHLYKEAIEDFDKAISLYSEDAEFYYYRGL 432



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 144/311 (46%), Gaps = 5/311 (1%)

Query: 365 NKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N K  +   +K   I+ D   S   R +A+ +   Y  A++ + + ++ +P    +   R
Sbjct: 303 NYKEAINYYTKIIEINDDIYYSYYNRALAEESLELYEDALADYSRAIELNPEDTYSYNNR 362

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G  +   +  + A+ D+ +AI+   +    +  R   +  +    EAI+D  KA+     
Sbjct: 363 GLIKNEMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDFDKAISLYSE 422

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A+  + RG+ N    + + A++ ++  ++LD +  +AY   GL      +YK A +   
Sbjct: 423 DAEFYYYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIHYRNTDYKSAIKDFK 482

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           K I+LD   + A  HL   Y  L   E AL+   +V+ +D      Y+ R L    +  +
Sbjct: 483 KVIELDNESVYANYHLALSYDALEEYETALKYYSRVIELDPTTPDPYYNRALAEIEMELY 542

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
            +AI+D    + ID + ++  +    CY ++ E+++AI  Y   ++ +  S++ +  + L
Sbjct: 543 NEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGL 602

Query: 662 AFYQKEIALYT 672
           +  + E+ LY 
Sbjct: 603 S--KVELKLYN 611



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 132/267 (49%), Gaps = 6/267 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQI--LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           RG ++     Y  A+S F+++  L++D    ++   +G    F    E AI+DF +AI+ 
Sbjct: 190 RGHSKRYLNMYEEALSDFNKVIQLRDDD--SDSYYSKGLTEFFLGLYEDAINDFDKAIEL 247

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILHERGIVNFKFKDFNAA 502
           + +   A+  RG  + +L    EA+ D  KALE+  E N   I ++ G++ +K  ++  A
Sbjct: 248 DGNYSNAYYFRGLTKNSLELYKEAMDDYKKALEYADEDNIISIYNDMGLLEYKLGNYKEA 307

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +   +  ++++ +   +Y    LA  S+  Y+ A   + +AI+L+     ++ +      
Sbjct: 308 INYYTKIIEINDDIYYSYYNRALAEESLELYEDALADYSRAIELNPEDTYSYNNRGLIKN 367

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           ++   ++ALE   + + +++  +  Y+ R LL   +  +K+AI+D    + +   + E  
Sbjct: 368 EMQMYDEALEDYNKAIELEQNDAYLYNNRALLKGRMHLYKEAIEDFDKAISLYSEDAEFY 427

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLE 649
           Y R      + E  EA+K  + A++L+
Sbjct: 428 YYRGLTNSYLNELDEALKYINKAIELD 454



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 101/212 (47%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           +F   RG+      +   A+   ++ ++ D  Y  A   RG       + ++AI DF + 
Sbjct: 425 EFYYYRGLTNSYLNELDEALKYINKAIELDSKYINAYNERGLIHYRNTDYKSAIKDFKKV 484

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ +  +  A      +  AL E   A++  S+ +E +P + D  + R +   + + +N 
Sbjct: 485 IELDNESVYANYHLALSYDALEEYETALKYYSRVIELDPTTPDPYYNRALAEIEMELYNE 544

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ED    +++D     AY  +G+   S+ E++KA + + K I+ D++ ++A+ +     
Sbjct: 545 AIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGLSK 604

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
            +L    +A E   + L ID +++ AY+  G 
Sbjct: 605 VELKLYNEAFEDYIRALEIDPKYANAYNGIGF 636



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 82/167 (49%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
            D+ + RG+  F  K +  A++D    ++L  +  +AY   G + S +G+Y++  +   K
Sbjct: 82  VDVYYNRGLSYFNLKKYEEAIKDFDKVIELSPDKSNAYYNRGHSKSYLGQYEEGIKDFKK 141

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
            ++ + +  EA  ++   Y  L   E+A++     L +D     AY+ RG     L  ++
Sbjct: 142 VLEFNEDDAEAIYYIGLGYFYLGRYEEAIKNFDISLLLDDEIDDAYYYRGHSKRYLNMYE 201

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +A+ D +  + +   + +  Y +      +G Y +AI D+D A++L+
Sbjct: 202 EALSDFNKVIQLRDDDSDSYYSKGLTEFFLGLYEDAINDFDKAIELD 248



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 2/151 (1%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           ++S+  ++ L+     + E  Y +A+  + ++++ DP  P+    R  A         AI
Sbjct: 489 NESVYANYHLALSYDALEE--YETALKYYSRVIELDPTTPDPYYNRALAEIEMELYNEAI 546

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            DF + I+ + +  +A+   G    +L E  +AI   +K +E + +S D  + RG+   +
Sbjct: 547 EDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIEADKSSIDAYYNRGLSKVE 606

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
            K +N A ED    +++D +  +AY  +G +
Sbjct: 607 LKLYNEAFEDYIRALEIDPKYANAYNGIGFS 637



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 8/207 (3%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+       Y SAI  F ++++ D     A      +     E E A+  ++  I+ +P
Sbjct: 464 RGLIHYRNTDYKSAIKDFKKVIELDNESVYANYHLALSYDALEEYETALKYYSRVIELDP 523

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  + +  R  A   +    EAI+D  K +E +    D     GI     K+   A++  
Sbjct: 524 TTPDPYYNRALAEIEMELYNEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCY 583

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL----TQFYQ 562
           +  ++ DK +  AY   GL+   +  Y +A E +++A+++D  +  A+  +    T++  
Sbjct: 584 TKVIEADKSSIDAYYNRGLSKVELKLYNEAFEDYIRALEIDPKYANAYNGIGFSKTKYSN 643

Query: 563 DL---ANSEKALECLQQ-VLYIDKRFS 585
           +     N+++A++ L   +LY +K  S
Sbjct: 644 NEFKNGNTQRAIDLLNDALLYYEKGLS 670



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 10/172 (5%)

Query: 330 KSSISDNK-----SSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
           KS+I D K      ++S  +   L+  +D L+E     K       +R+ +    + D  
Sbjct: 475 KSAIKDFKKVIELDNESVYANYHLALSYDALEEYETALK-----YYSRVIELDPTTPDPY 529

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +R +A++    Y  AI  F ++++ D    +A    G      +E + AI  +T+ I++
Sbjct: 530 YNRALAEIEMELYNEAIEDFYKVIEIDNTIMDAYFNIGICYDSLKEHQKAIDCYTKVIEA 589

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           + S+ +A+  RG ++  L    EA +D  +ALE +P  A+  +  G    K+
Sbjct: 590 DKSSIDAYYNRGLSKVELKLYNEAFEDYIRALEIDPKYANAYNGIGFSKTKY 641



 Score = 40.8 bits (94), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 22/78 (28%), Positives = 35/78 (44%)

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            Y+ RGL    L ++++AIKD    + + P      Y R      +G+Y E IKD+   L
Sbjct: 84  VYYNRGLSYFNLKKYEEAIKDFDKVIELSPDKSNAYYNRGHSKSYLGQYEEGIKDFKKVL 143

Query: 647 DLELDSMEKFVLQCLAFY 664
           +   D  E      L ++
Sbjct: 144 EFNEDDAEAIYYIGLGYF 161


>gi|163847351|ref|YP_001635395.1| hypothetical protein Caur_1789 [Chloroflexus aurantiacus J-10-fl]
 gi|222525196|ref|YP_002569667.1| hypothetical protein Chy400_1936 [Chloroflexus sp. Y-400-fl]
 gi|163668640|gb|ABY35006.1| TPR repeat-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222449075|gb|ACM53341.1| TPR repeat-containing protein [Chloroflexus sp. Y-400-fl]
          Length = 450

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 141/309 (45%), Gaps = 9/309 (2%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           ++ +AI  F + +   P YP AL  RG   RA +R  EA + DF  A+  NP+       
Sbjct: 78  RHEAAIEAFSRAIALRPEYPWALGSRGQVWRALRRHHEALV-DFDAALALNPNLAWIHAE 136

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG++  AL +  EAI+  S+AL  +P     L  RGI   + +DF AA+ D  A + L  
Sbjct: 137 RGESLRALNQHQEAIEAFSRALAIDPAYPWALGHRGITYREMRDFPAAIADFDAAIALQG 196

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
                Y   G       +++ A     +A++LD  +  A+G     ++ + +   AL   
Sbjct: 197 NMAWLYAERGETRRLADDFEGALADLSRALELDSAYAWAFGSRGAAFRAVGDLNAALADF 256

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L +D  ++  Y  RGLL     +  +AI D S  + ++P+ I  L  R   +     
Sbjct: 257 NRALELDPGYTWVYFQRGLLHRNTNRTDEAIADFSRAIELEPNYIAALAERGELFRLQRR 316

Query: 635 YREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-ASKINSEFCWFDID-G 687
           Y EA++D++  ++L+ D          V + LA Y + +A +  A  +  +  W   + G
Sbjct: 317 YEEALRDFNRTIELQPDHAWALGSRGQVYRVLARYDEALADFNRALALKPDMVWVIAERG 376

Query: 688 DIDPLFKEY 696
           +   L + Y
Sbjct: 377 ETHRLLRNY 385



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 136/307 (44%), Gaps = 11/307 (3%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           ++  AI  F + L  DP YP AL  RG      R+  AAI+DF  AI    +    +  R
Sbjct: 146 QHQEAIEAFSRALAIDPAYPWALGHRGITYREMRDFPAAIADFDAAIALQGNMAWLYAER 205

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G+ R    +   A+ DLS+ALE +   A     RG       D NAA+ D +  ++LD  
Sbjct: 206 GETRRLADDFEGALADLSRALELDSAYAWAFGSRGAAFRAVGDLNAALADFNRALELDPG 265

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
               Y   GL   +     +A     +AI+L+ N++ A     + ++     E+AL    
Sbjct: 266 YTWVYFQRGLLHRNTNRTDEAIADFSRAIELEPNYIAALAERGELFRLQRRYEEALRDFN 325

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + +    + A   RG +   L ++ +A+ D +  L + P  +  +  R   +  +  Y
Sbjct: 326 RTIELQPDHAWALGSRGQVYRVLARYDEALADFNRALALKPDMVWVIAERGETHRLLRNY 385

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDG--DIDPLF 693
            EA++D++ A  LEL   + +VL       +  A Y + KI  E  + D+    +IDP  
Sbjct: 386 NEALEDFNRA--LELSPNDSWVL------SRRGATYQSLKIYEE-AYIDLTRAIEIDPNN 436

Query: 694 KEYWCKR 700
              W +R
Sbjct: 437 AWAWAQR 443



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 84/180 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG+   N  +   AI+ F + ++ +P Y  AL  RG     QR  E A+ DF   I+ 
Sbjct: 271 FQRGLLHRNTNRTDEAIADFSRAIELEPNYIAALAERGELFRLQRRYEEALRDFNRTIEL 330

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RGQ    L    EA+ D ++AL  +P+   ++ ERG  +   +++N A+E
Sbjct: 331 QPDHAWALGSRGQVYRVLARYDEALADFNRALALKPDMVWVIAERGETHRLLRNYNEALE 390

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++L   +    +  G    S+  Y++A     +AI++D N   AW      ++ +
Sbjct: 391 DFNRALELSPNDSWVLSRRGATYQSLKIYEEAYIDLTRAIEIDPNNAWAWAQRGSLFRQM 450



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 104/236 (44%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           +  A++   + L+ D  Y  A   RG A     +L AA++DF  A++ +P     + +RG
Sbjct: 215 FEGALADLSRALELDSAYAWAFGSRGAAFRAVGDLNAALADFNRALELDPGYTWVYFQRG 274

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                   + EAI D S+A+E EPN    L ERG +    + +  A+ D +  ++L  ++
Sbjct: 275 LLHRNTNRTDEAIADFSRAIELEPNYIAALAERGELFRLQRRYEEALRDFNRTIELQPDH 334

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A    G     +  Y +A     +A+ L  + +       + ++ L N  +ALE   +
Sbjct: 335 AWALGSRGQVYRVLARYDEALADFNRALALKPDMVWVIAERGETHRLLRNYNEALEDFNR 394

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
            L +    S     RG     L  +++A  DL+  + IDP+N      R S +  +
Sbjct: 395 ALELSPNDSWVLSRRGATYQSLKIYEEAYIDLTRAIEIDPNNAWAWAQRGSLFRQM 450



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 108/251 (43%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           +A++ F++ +  D  Y  A   RG        LE ++ D T A    P        RG+ 
Sbjct: 13  AALADFNRAIAIDENYAWAYFQRGQVLRELGRLEESLDDLTRACDLEPDDPAYHAERGET 72

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
              L     AI+  S+A+   P     L  RG V    +  + A+ D  A + L+     
Sbjct: 73  LRMLRRHEAAIEAFSRAIALRPEYPWALGSRGQVWRALRRHHEALVDFDAALALNPNLAW 132

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
            +   G +L ++ ++++A EA  +A+ +D  +  A GH    Y+++ +   A+      +
Sbjct: 133 IHAERGESLRALNQHQEAIEAFSRALAIDPAYPWALGHRGITYREMRDFPAAIADFDAAI 192

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            +    +  Y  RG         + A+ DLS  L +D +       R + + A+G+   A
Sbjct: 193 ALQGNMAWLYAERGETRRLADDFEGALADLSRALELDSAYAWAFGSRGAAFRAVGDLNAA 252

Query: 639 IKDYDAALDLE 649
           + D++ AL+L+
Sbjct: 253 LADFNRALELD 263



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 115/301 (38%), Gaps = 71/301 (23%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           EAA++DF  AI  + +   A+ +RGQ    LG   E++ DL++A + EP+      ERG 
Sbjct: 12  EAALADFNRAIAIDENYAWAYFQRGQVLRELGRLEESLDDLTRACDLEPDDPAYHAERGE 71

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                +   AA+E  S  + L  E    Y +   AL S G                    
Sbjct: 72  TLRMLRRHEAAIEAFSRAIALRPE----YPW---ALGSRG-------------------- 104

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           + W  L + ++ L + + AL     + +I          RG  L  L QH++AI+  S  
Sbjct: 105 QVWRALRRHHEALVDFDAALALNPNLAWIHAE-------RGESLRALNQHQEAIEAFSRA 157

Query: 612 LGIDPSNIECLYLRASCYHAI---------------------------GEYREAIKDYDA 644
           L IDP+    L  R   Y  +                           GE R    D++ 
Sbjct: 158 LAIDPAYPWALGHRGITYREMRDFPAAIADFDAAIALQGNMAWLYAERGETRRLADDFEG 217

Query: 645 AL-----DLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCK 699
           AL      LELDS   +     AF  +  A      +N+    F+   ++DP +   + +
Sbjct: 218 ALADLSRALELDSAYAW-----AFGSRGAAFRAVGDLNAALADFNRALELDPGYTWVYFQ 272

Query: 700 R 700
           R
Sbjct: 273 R 273


>gi|404477129|ref|YP_006708560.1| hypothetical protein B2904_orf2487 [Brachyspira pilosicoli B2904]
 gi|404438618|gb|AFR71812.1| TPR domain-containing protein [Brachyspira pilosicoli B2904]
          Length = 537

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 3/150 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+ N G Y  AI  FD+ ++ D  Y  A   RG ++A     E AI DF +AI+ N
Sbjct: 331 NRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIELN 390

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+  RG A+  L +  EAI+D  KA+E  PN+ D  + RG        +  A++D
Sbjct: 391 PNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNLDAYNNRGSAKAILMQYKEAIKD 450

Query: 506 LSACVKLDKENKSAYTYLGLA---LSSIGE 532
               +KL   N  AY  + L    L++I E
Sbjct: 451 FDKAIKLKANNAQAYLNMILPKQLLANITE 480



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 86/143 (60%)

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
           AY   G+A +++G Y++A +   KAI+LD N+L A+ +       L N+E+A++   + +
Sbjct: 328 AYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAI 387

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            ++   S+AY+ RG   + L Q+++AIKD    + ++P+N++    R S    + +Y+EA
Sbjct: 388 ELNPNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNLDAYNNRGSAKAILMQYKEA 447

Query: 639 IKDYDAALDLELDSMEKFVLQCL 661
           IKD+D A+ L+ ++ + ++   L
Sbjct: 448 IKDFDKAIKLKANNAQAYLNMIL 470



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 7/130 (5%)

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+  RG A+  LG   EAI+D  KA+E + N     + RGI   K  +   A++D +  +
Sbjct: 328 AYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAI 387

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------LTQFYQD 563
           +L+     AY   G A +++ +Y++A + + KAI+L+ N L+A+ +       L Q+ + 
Sbjct: 388 ELNPNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNLDAYNNRGSAKAILMQYKEA 447

Query: 564 LANSEKALEC 573
           + + +KA++ 
Sbjct: 448 IKDFDKAIKL 457



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 62/108 (57%)

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N+L A+ +      +L   E+A++   + + +D  +  AY+ RG+    LG +++AIKD 
Sbjct: 324 NYLIAYNNRGIAKNNLGLYEEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDF 383

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           +  + ++P+  E    R +  + + +Y EAIKDYD A++L  ++++ +
Sbjct: 384 NKAIELNPNISEAYNNRGNAKNNLKQYEEAIKDYDKAIELNPNNLDAY 431



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 14/98 (14%)

Query: 47  CSLRNWSKAIRILDSLLAQ-------------SYEIQDICNRAFCYSQLELHKHVIRDCD 93
            S+  ++K I + D+LL +             +Y I    NR    + L L++  I+D D
Sbjct: 292 LSINYYNKIIEMTDNLLKEYDENSEKYSKYKNNYLIA-YNNRGIAKNNLGLYEEAIKDFD 350

Query: 94  KALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
           KA++LD   L AY  +G + + LG  EEA+  + K  E
Sbjct: 351 KAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIE 388



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 11/118 (9%)

Query: 17  HKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQSYEIQD 71
            + I + D+ + +DS   SA   R I  AKL     ++++++KAI  L+  ++++Y    
Sbjct: 343 EEAIKDFDKAIELDSNYLSAYNNRGISKAKLGNNEEAIKDFNKAIE-LNPNISEAYN--- 398

Query: 72  ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
             NR    + L+ ++  I+D DKA++L+P  L AY  +G A + L + +EA+  ++K 
Sbjct: 399 --NRGNAKNNLKQYEEAIKDYDKAIELNPNNLDAYNNRGSAKAILMQYKEAIKDFDKA 454



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 6/84 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +++++ KAI  LDS    +Y      NR    ++L  ++  I+D +KA++L+P + +AY 
Sbjct: 345 AIKDFDKAIE-LDSNYLSAYN-----NRGISKAKLGNNEEAIKDFNKAIELNPNISEAYN 398

Query: 108 LKGCAFSALGRKEEALSVWEKGYE 131
            +G A + L + EEA+  ++K  E
Sbjct: 399 NRGNAKNNLKQYEEAIKDYDKAIE 422


>gi|425459650|ref|ZP_18839136.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
 gi|389822559|emb|CCI29802.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
          Length = 736

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 130/263 (49%), Gaps = 1/263 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
           +Y  A++ + Q LK +P Y EAL G+  A    +    A++ + +AIQ NP SA +AW  
Sbjct: 376 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 435

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG+A   LG++ EA++   + L   P ++     +  +  + + ++AA + L   +   +
Sbjct: 436 RGEALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 495

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +   +   G +L ++ +Y+ A +A+ +A+ ++ +    W         L     ALE  
Sbjct: 496 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 555

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            +    + +FS+AY+ +G++L  LG++ +A++  +     + +  +    + +  H +  
Sbjct: 556 SKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLER 615

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
           ++EAI  Y+ A  +     E F+
Sbjct: 616 FQEAIASYEKARRISSRKSEVFI 638



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 3/261 (1%)

Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y+ A++ +++ ++ +P    +A +GRG A     + + A+  F   +  NP+A +AW+ 
Sbjct: 410 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLGKNQEALESFERVLSLNPAASQAWQG 469

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      L +   A + L K L F+ N A I +++G      +D+  AV+     + ++ 
Sbjct: 470 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 529

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +N   +   G +L  + +   A E++ KA Q +  F +A+       Q L  + +ALE  
Sbjct: 530 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAF 589

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY-LRASCYHAIG 633
            Q    +  + +A+  +G LLH L + ++AI        I     E    +  +CY  +G
Sbjct: 590 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYR-LG 648

Query: 634 EYREAIKDYDAALDLELDSME 654
           +Y +AI  Y  A+  + D+ E
Sbjct: 649 DYSQAITAYQQAIQRQKDNPE 669



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 115/262 (43%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A    GK   A+  F+++L  +P   +A  G+       ++  AA     + +  
Sbjct: 434 LGRGEALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 493

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             +  + W ++G +   L +   A++   +AL  E ++A I +++G   ++    N A+E
Sbjct: 494 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 553

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
             S   + + +   AY   G+ L  +G   +A EA  +A + + N+ +AW +       L
Sbjct: 554 SYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 613

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+   ++   I  R S+ +   G   + LG + +AI      +     N E    
Sbjct: 614 ERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKS 673

Query: 625 RASCYHAIGEYREAIKDYDAAL 646
             + +  +G+Y  AI+ Y  +L
Sbjct: 674 LGNSWFKLGQYERAIQAYQESL 695



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 8/210 (3%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +++G   ++ K +  A+      +K++ +   A      AL ++  Y +A   + KAIQ+
Sbjct: 365 YQQGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQI 424

Query: 547 DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           + +   +AW    +    L  +++ALE  ++VL ++   S+A+  +  +   L Q+  A 
Sbjct: 425 NPDSAWQAWLGRGEALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQ 484

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           K L   L    ++ +  Y +      + +Y  A+K YD AL +E D+        L +YQ
Sbjct: 485 KALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDN-------ALIWYQ 537

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           K  +LY  +KIN+    +   G  +P F +
Sbjct: 538 KGNSLYQLNKINNALESYSKAGQFNPQFSQ 567



 Score = 39.7 bits (91), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 8/193 (4%)

Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
           LN  N   ESYSK+   + + S +  S+  +      L++    ++  + F  T+ +K+ 
Sbjct: 545 LNKINNALESYSKAGQFNPQFSQAYYSQGII------LQKLGRNSEALEAF--TQATKAN 596

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S      L++G       ++  AI+ +++  +      E  IG G A     +   AI+ 
Sbjct: 597 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITA 656

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +AIQ      E WK  G +   LG+   AIQ   ++L +  N  ++  ++ +   +++
Sbjct: 657 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 716

Query: 498 DFNAAVEDLSACV 510
           +   + ++ +  V
Sbjct: 717 ELQQSPQNPTPKV 729


>gi|428320554|ref|YP_007118436.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
 gi|428244234|gb|AFZ10020.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
           nigro-viridis PCC 7112]
          Length = 411

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 34/266 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  Q+ +G +  AI+ +D+ L+  P   EA   RG A      LE AI+ + +A++  
Sbjct: 162 NRGYEQLMKGDFEGAIASYDKALEIKPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIK 221

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A A LG   +AI    KALE +P+  +  + RG+              
Sbjct: 222 PDLHEAWYIRGLALANLGRLEDAIASYDKALEIKPDYHEAWYNRGV-------------- 267

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                               AL ++G  +    ++ KA+++  ++ EAW +     +DL 
Sbjct: 268 --------------------ALGNLGRLENEIASYDKALEIKPDYHEAWYNRGVALRDLG 307

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E A+    + L       +A+++RGL L  LG+ + A+      L   P   E  Y+R
Sbjct: 308 RIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRIEDAVASWDKALKFKPDYHEAWYIR 367

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
                 +G   +AI  +D AL  + D
Sbjct: 368 GVALVKLGRIEDAITSFDKALKFKPD 393



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 3/181 (1%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +T   K+  I  D   +   RG+A  N G+   AI+ +D+ L+  P Y EA   RG A 
Sbjct: 210 AITSYDKALEIKPDLHEAWYIRGLALANLGRLEDAIASYDKALEIKPDYHEAWYNRGVAL 269

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                LE  I+ + +A++  P   EAW  RG A   LG   +AI    KAL+F+P+  + 
Sbjct: 270 GNLGRLENEIASYDKALEIKPDYHEAWYNRGVALRDLGRIEDAIASCDKALKFKPDLHEA 329

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG+   K      AV      +K   +   A+   G+AL  +G  + A  +  KA++
Sbjct: 330 WYIRGLALGKLGRIEDAVASWDKALKFKPDYHEAWYIRGVALVKLGRIEDAITSFDKALK 389

Query: 546 L 546
            
Sbjct: 390 F 390



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG  +   G+   AI    KALE +P S +    RG   +       A+      +++  
Sbjct: 163 RGYEQLMKGDFEGAIASYDKALEIKPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIKP 222

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHLTQFYQDLANS 567
           +   A+   GLAL+++G  + A  ++ KA+++  ++ EAW       G+L +   ++A+ 
Sbjct: 223 DLHEAWYIRGLALANLGRLEDAIASYDKALEIKPDYHEAWYNRGVALGNLGRLENEIASY 282

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +KALE       I   + +A++ RG+ L  LG+ + AI      L   P   E  Y+R  
Sbjct: 283 DKALE-------IKPDYHEAWYNRGVALRDLGRIEDAIASCDKALKFKPDLHEAWYIRGL 335

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
               +G   +A+  +D AL  + D  E       A+Y + +AL    +I      FD
Sbjct: 336 ALGKLGRIEDAVASWDKALKFKPDYHE-------AWYIRGVALVKLGRIEDAITSFD 385



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 82/178 (46%)

Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
           K  S +   +RG A  + G+   AI+ +D+ L+  P   EA   RG A A    LE AI+
Sbjct: 187 KPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIKPDLHEAWYIRGLALANLGRLEDAIA 246

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
            + +A++  P   EAW  RG A   LG     I    KALE +P+  +  + RG+     
Sbjct: 247 SYDKALEIKPDYHEAWYNRGVALGNLGRLENEIASYDKALEIKPDYHEAWYNRGVALRDL 306

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
                A+      +K   +   A+   GLAL  +G  + A  +  KA++   ++ EAW
Sbjct: 307 GRIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRIEDAVASWDKALKFKPDYHEAW 364



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 3/166 (1%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    K+  I  D+     +RG+A  N G+  + I+ +D+ L+  P Y EA   RG A 
Sbjct: 244 AIASYDKALEIKPDYHEAWYNRGVALGNLGRLENEIASYDKALEIKPDYHEAWYNRGVAL 303

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                +E AI+   +A++  P   EAW  RG A   LG   +A+    KAL+F+P+  + 
Sbjct: 304 RDLGRIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRIEDAVASWDKALKFKPDYHEA 363

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            + RG+   K      A+      +K   ++  A     +AL  +G
Sbjct: 364 WYIRGVALVKLGRIEDAITSFDKALKFKPDDHLASKNRTIALKKLG 409



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 7/212 (3%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG       DF  A+      +++   +  A+   G AL  +G  + A  ++ KA+++  
Sbjct: 163 RGYEQLMKGDFEGAIASYDKALEIKPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIKP 222

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           +  EAW        +L   E A+    + L I   + +A++ RG+ L  LG+ +  I   
Sbjct: 223 DLHEAWYIRGLALANLGRLEDAIASYDKALEIKPDYHEAWYNRGVALGNLGRLENEIASY 282

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
              L I P   E  Y R      +G   +AI   D AL  + D  E       A+Y + +
Sbjct: 283 DKALEIKPDYHEAWYNRGVALRDLGRIEDAIASCDKALKFKPDLHE-------AWYIRGL 335

Query: 669 ALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           AL    +I      +D      P + E W  R
Sbjct: 336 ALGKLGRIEDAVASWDKALKFKPDYHEAWYIR 367



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
           NR      L   +  I  CDKAL+  P L +A+ ++G A   LGR E+A++ W+K
Sbjct: 298 NRGVALRDLGRIEDAIASCDKALKFKPDLHEAWYIRGLALGKLGRIEDAVASWDK 352



 Score = 40.4 bits (93), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 22/71 (30%), Positives = 38/71 (53%)

Query: 61  SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKE 120
           +L  + Y  +   NR      L   +  I   DKAL++ P L +A+ ++G A + LGR E
Sbjct: 183 ALEIKPYSYEAWFNRGHALYDLGRLEDAITSYDKALEIKPDLHEAWYIRGLALANLGRLE 242

Query: 121 EALSVWEKGYE 131
           +A++ ++K  E
Sbjct: 243 DAIASYDKALE 253


>gi|300023725|ref|YP_003756336.1| hypothetical protein Hden_2217 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299525546|gb|ADJ24015.1| TPR repeat-containing protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 558

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 115/270 (42%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R +A    G+   A+  ++  ++  P YP A   RG       +L+ A+ DF  A+   P
Sbjct: 73  RAVANARLGQIKLALEDYNHAVELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAP 132

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  R  A   LG+   AI+D +KA+E  P SA  L  RG+        +AA+ D 
Sbjct: 133 GYAAAYSNRANAEMKLGKPAVAIRDFTKAIELLPASAPPLSGRGLAYLATDKPHAAIRDF 192

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  V  D    +AY     A  +IG    A E   +AI  D N  E +      Y   AN
Sbjct: 193 SRAVSADARFATAYRNRAEARMTIGLRDDAIEDLSRAIAFDVNNTELYVVRGYAYLLNAN 252

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           +  AL+   + + +D   S A+  RGL         +A  DL+  + +DP +      RA
Sbjct: 253 TASALKDFSRAIELDPNASAAFEGRGLANSFAEASDEAYADLNRAIELDPRSPVAYAFRA 312

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             Y    +     KD + A+ L+ +S E  
Sbjct: 313 VVYKQNNQPDIGAKDVETAIKLDPNSPEAL 342



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 34/264 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R  A++  GK A AI  F + ++  P     L GRG A     +  AAI DF+ A+ ++
Sbjct: 140 NRANAEMKLGKPAVAIRDFTKAIELLPASAPPLSGRGLAYLATDKPHAAIRDFSRAVSAD 199

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                A++ R +AR  +G   +AI+DLS+A+ F+ N+ ++   RG       +  +A++D
Sbjct: 200 ARFATAYRNRAEARMTIGLRDDAIEDLSRAIAFDVNNTELYVVRGYAYLLNANTASALKD 259

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  ++LD    +A+   GLA S                     F EA            
Sbjct: 260 FSRAIELDPNASAAFEGRGLANS---------------------FAEA------------ 286

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            S++A   L + + +D R   AY  R ++     Q     KD+ + + +DP++ E L+ R
Sbjct: 287 -SDEAYADLNRAIELDPRSPVAYAFRAVVYKQNNQPDIGAKDVETAIKLDPNSPEALWAR 345

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
                A G    AI D    L L+
Sbjct: 346 GEIAEASGHADTAIADLRRVLQLK 369



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/299 (21%), Positives = 118/299 (39%), Gaps = 38/299 (12%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE----ALIGRGT 423
           F  + +  ++ +       +G AQ+  G  A+A++ + + L++  +  +     L  R  
Sbjct: 16  FVTSGVQAAEGVPQPSAAEQGAAQMVRGDVATAVTAYTEALRDTGLANDRRATILNDRAV 75

Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
           A A   +++ A+ D+  A++  P    A+  RG    A+G+  EA++D  +AL   P  A
Sbjct: 76  ANARLGQIKLALEDYNHAVELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAPGYA 135

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
                R     K      A+ D +  ++L   +    +  GLA      Y   ++ H   
Sbjct: 136 AAYSNRANAEMKLGKPAVAIRDFTKAIELLPASAPPLSGRGLA------YLATDKPH--- 186

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
                                     A+    + +  D RF+ AY  R      +G    
Sbjct: 187 -------------------------AAIRDFSRAVSADARFATAYRNRAEARMTIGLRDD 221

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           AI+DLS  +  D +N E   +R   Y        A+KD+  A++L+ ++   F  + LA
Sbjct: 222 AIEDLSRAIAFDVNNTELYVVRGYAYLLNANTASALKDFSRAIELDPNASAAFEGRGLA 280



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 6/221 (2%)

Query: 446 PSA---GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           PSA   G A   RG    A+    EA++D   A +     A IL++R + N +      A
Sbjct: 30  PSAAEQGAAQMVRGDVATAVTAYTEALRDTGLAND---RRATILNDRAVANARLGQIKLA 86

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +ED +  V+L  E   AY   G  L ++G+  +A +   +A+ L   +  A+ +      
Sbjct: 87  LEDYNHAVELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAPGYAAAYSNRANAEM 146

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            L     A+    + + +    +     RGL      +   AI+D S  +  D       
Sbjct: 147 KLGKPAVAIRDFTKAIELLPASAPPLSGRGLAYLATDKPHAAIRDFSRAVSADARFATAY 206

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
             RA     IG   +AI+D   A+  ++++ E +V++  A+
Sbjct: 207 RNRAEARMTIGLRDDAIEDLSRAIAFDVNNTELYVVRGYAY 247


>gi|425469644|ref|ZP_18848563.1| Mom72 protein [Microcystis aeruginosa PCC 9701]
 gi|389880474|emb|CCI38768.1| Mom72 protein [Microcystis aeruginosa PCC 9701]
          Length = 260

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 94/203 (46%), Gaps = 2/203 (0%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +P+       RG  R    +   AI+DFT+A+Q  P   +A+  RG A   LG+   AI 
Sbjct: 30  NPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIA 89

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++AL    N  + L  R    +  K + AAVED +  + L+      + Y G A   +
Sbjct: 90  DYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDL 149

Query: 531 GEYKKAEEAHLKAIQLD--RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           G + +A E + KA+ L   R       +    Y      E AL    + L I+  F++AY
Sbjct: 150 GRHPEAIEDYTKALSLQGTRGQDRILYNRALAYNRAGQQEMALRDYDESLKINANFAEAY 209

Query: 589 HLRGLLLHGLGQHKKAIKDLSSG 611
           H RGL  + LG  +KAI DL + 
Sbjct: 210 HNRGLTHYKLGNREKAIADLEAA 232



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 100/207 (48%), Gaps = 2/207 (0%)

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
           A+   +  I  LS      P  A   + RG+      D++ A+ D +  ++L+ ++  AY
Sbjct: 12  AIATFLLTISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAY 71

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              G A   +G+Y++A   + +A+ ++ N++ A G+    Y      E A+E   + + +
Sbjct: 72  YNRGYAELVLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIAL 131

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYLRASCYHAIGEYREA 638
           +  F+  +  RG     LG+H +AI+D +  L +  +  +   LY RA  Y+  G+   A
Sbjct: 132 NGNFADFFIYRGNAKDDLGRHPEAIEDYTKALSLQGTRGQDRILYNRALAYNRAGQQEMA 191

Query: 639 IKDYDAALDLELDSMEKFVLQCLAFYQ 665
           ++DYD +L +  +  E +  + L  Y+
Sbjct: 192 LRDYDESLKINANFAEAYHNRGLTHYK 218



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 2/218 (0%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  +    +NP     +  RG  R   G+   AI D ++AL+ EP  AD  + RG    
Sbjct: 20  ISPLSAQTTANPVKAVEFYNRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAEL 79

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  A+ D +  + ++    +A      A     +Y+ A E   KAI L+ NF + +
Sbjct: 80  VLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFF 139

Query: 555 GHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +      DL    +A+E   + L +   +   +  + R L  +  GQ + A++D    L
Sbjct: 140 IYRGNAKDDLGRHPEAIEDYTKALSLQGTRGQDRILYNRALAYNRAGQQEMALRDYDESL 199

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            I+ +  E  + R   ++ +G   +AI D +AA  L L
Sbjct: 200 KINANFAEAYHNRGLTHYKLGNREKAIADLEAAARLAL 237



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 4/193 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++  G Y+ AI+ F Q L+ +P   +A   RG A     + E AI+D+T+A+  N
Sbjct: 39  NRGVDRLTAGDYSGAIADFTQALQLEPKDADAYYNRGYAELVLGQYERAIADYTQALTIN 98

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +   A   R  A     +   A++D +KA+    N AD    RG           A+ED
Sbjct: 99  SNYVNALGNRCYAYYLTKKYEAAVEDCTKAIALNGNFADFFIYRGNAKDDLGRHPEAIED 158

Query: 506 LSACVKLD---KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
            +  + L     +++  Y    LA +  G+ + A   + ++++++ NF EA+ +    + 
Sbjct: 159 YTKALSLQGTRGQDRILYNR-ALAYNRAGQQEMALRDYDESLKINANFAEAYHNRGLTHY 217

Query: 563 DLANSEKALECLQ 575
            L N EKA+  L+
Sbjct: 218 KLGNREKAIADLE 230



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 2/157 (1%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A++  G+Y  AI+ + Q L  +  Y  AL  R  A    ++ EAA+ D T+A
Sbjct: 69  DAYYNRGYAELVLGQYERAIADYTQALTINSNYVNALGNRCYAYYLTKKYEAAVEDCTKA 128

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD--ILHERGIVNFKFKDF 499
           I  N +  + +  RG A+  LG   EAI+D +KAL  +       IL+ R +   +    
Sbjct: 129 IALNGNFADFFIYRGNAKDDLGRHPEAIEDYTKALSLQGTRGQDRILYNRALAYNRAGQQ 188

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ D    +K++     AY   GL    +G  +KA
Sbjct: 189 EMALRDYDESLKINANFAEAYHNRGLTHYKLGNREKA 225



 Score = 41.2 bits (95), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFT 439
           DF + RG A+ + G++  AI  + + L       +  I    A A+ R  + E A+ D+ 
Sbjct: 137 DFFIYRGNAKDDLGRHPEAIEDYTKALSLQGTRGQDRILYNRALAYNRAGQQEMALRDYD 196

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E+++ N +  EA+  RG     LG   +AI DL  A
Sbjct: 197 ESLKINANFAEAYHNRGLTHYKLGNREKAIADLEAA 232


>gi|217978527|ref|YP_002362674.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
           silvestris BL2]
 gi|217503903|gb|ACK51312.1| peptidase C14 caspase catalytic subunit p20 [Methylocella
           silvestris BL2]
          Length = 778

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 138/303 (45%), Gaps = 13/303 (4%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S+D   +RG+A+  EG Y  +I+ ++Q ++ D   P+    RG A   + E + AI+D+ 
Sbjct: 96  SIDAYRNRGLARQIEGDYDGSIADYNQAIRIDAKSPDLYNSRGAALVNKGEYDRAIADYD 155

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI+ N    +A+  RGQAR    +   AI D  + ++  PN A    +R        D 
Sbjct: 156 KAIRLNGKFAKAFYNRGQARYLKNQPDRAIADFDEFIKLSPNEAKGYVQRADARLAKADV 215

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ D  + +K+D  N  A+++ G A    G+ +K+     KAI+L     E++ +   
Sbjct: 216 LGAIADYDSAIKVDGGNGEAFSHRGEARRLQGDLEKSLLDQNKAIELAAT-PESYVNRAL 274

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            Y D    + A+    + L +  ++  A+  RG +    G  + A+ DL+  L IDP   
Sbjct: 275 VYADQGKLDLAIADCDEALLLRPKYDLAFAQRGRVKRLSGDLEGALGDLNKALSIDPRLP 334

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF------------YQKE 667
             L  R   + A      AI D+  AL +  D +  +  +  A+            YQK 
Sbjct: 335 VSLSFRGDVFLARDSSDRAIADFTEALRVAPDFVAAYAGRGQAYEKAGQLPKAKADYQKA 394

Query: 668 IAL 670
           ++L
Sbjct: 395 LSL 397



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 41/230 (17%)

Query: 432 EAAISDFTEAIQSNPSAGEA-----WKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +A I   T  I+S  SA EA        RG A+   G+   AI D S+AL+  PNS D  
Sbjct: 43  DAGIPACTRLIES--SADEAATPGLLNNRGVAKVRKGDLEGAIADFSRALDRNPNSIDAY 100

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
             RG+      D++ ++ D +  +++D ++   Y   G AL + GEY +A   + KAI+L
Sbjct: 101 RNRGLARQIEGDYDGSIADYNQAIRIDAKSPDLYNSRGAALVNKGEYDRAIADYDKAIRL 160

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           +                                   +F+KA++ RG   +   Q  +AI 
Sbjct: 161 N----------------------------------GKFAKAFYNRGQARYLKNQPDRAIA 186

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           D    + + P+  +    RA    A  +   AI DYD+A+ ++  + E F
Sbjct: 187 DFDEFIKLSPNEAKGYVQRADARLAKADVLGAIADYDSAIKVDGGNGEAF 236



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 109/249 (43%), Gaps = 35/249 (14%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P  L  RG A+  + +LE AI+DF+ A+  NP++ +A++ RG AR   G+   +I D ++
Sbjct: 63  PGLLNNRGVAKVRKGDLEGAIADFSRALDRNPNSIDAYRNRGLARQIEGDYDGSIADYNQ 122

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A+  +  S D+ + RG       +++ A+ D    ++L+ +   A+            Y 
Sbjct: 123 AIRIDAKSPDLYNSRGAALVNKGEYDRAIADYDKAIRLNGKFAKAF------------YN 170

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           + +  +LK  Q DR    A     +F +   N  K       V   D R +KA  L    
Sbjct: 171 RGQARYLKN-QPDR----AIADFDEFIKLSPNEAKGY-----VQRADARLAKADVL---- 216

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
                    AI D  S + +D  N E    R       G+  +++ D + A++L   + E
Sbjct: 217 --------GAIADYDSAIKVDGGNGEAFSHRGEARRLQGDLEKSLLDQNKAIELAA-TPE 267

Query: 655 KFVLQCLAF 663
            +V + L +
Sbjct: 268 SYVNRALVY 276


>gi|156741814|ref|YP_001431943.1| hypothetical protein Rcas_1834 [Roseiflexus castenholzii DSM 13941]
 gi|156233142|gb|ABU57925.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 593

 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 12/246 (4%)

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           +TEAI+++PS+ EA+  R Q    L     A+ D ++AL  +P +A+  H+R    ++ +
Sbjct: 328 YTEAIRADPSSFEAYFGRAQVNFNLSLFQNAVDDFTRALALDPENAEAYHQRARAFYRLQ 387

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
            ++ A+ D +  +  D  N       G+A    G+Y +A     +++QL+ +    + H 
Sbjct: 388 QYDEAIRDFTEALARDPNNDVLLMRRGVAYRDKGQYDEALADFDQSLQLNPDVSFTYYHR 447

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              +Q     E+A     + L I   +  AY  RG L    G  + A++D +  + +D +
Sbjct: 448 ALLFQATGRLERARADFDRALTIAPEYRLAYVGRGGLRLEQGDARGALRDCTRAIELDAT 507

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQCL-------AFYQ 665
            I+  + RA    A+ +YR A+ D D  +  + DS + +       Q L       A YQ
Sbjct: 508 EIDAYFCRARAAIALRDYRAAVADLDTVIARDPDSADAYRERGRAHQALRDTDEARADYQ 567

Query: 666 KEIALY 671
           + I LY
Sbjct: 568 RAIELY 573



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 18/196 (9%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAISDFT 439
           + RG+A  ++G+Y  A++ FDQ L+ +P      Y  AL+ + T R     LE A +DF 
Sbjct: 411 MRRGVAYRDKGQYDEALADFDQSLQLNPDVSFTYYHRALLFQATGR-----LERARADFD 465

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            A+   P    A+  RG  R   G++  A++D ++A+E +    D    R       +D+
Sbjct: 466 RALTIAPEYRLAYVGRGGLRLEQGDARGALRDCTRAIELDATEIDAYFCRARAAIALRDY 525

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
            AAV DL   +  D ++  AY   G A  ++ +  +A   + +AI+L R        L  
Sbjct: 526 RAAVADLDTVIARDPDSADAYRERGRAHQALRDTDEARADYQRAIELYR--------LQG 577

Query: 560 FYQDLANSEKALECLQ 575
             +DLA  EK L  L+
Sbjct: 578 RDKDLAEVEKLLAALK 593



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 40/265 (15%)

Query: 388 GIAQVN--EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR--ELEAAISDFTEAIQ 443
           G AQVN     + +A+  F + L  DP   EA   R  ARAF R  + + AI DFTEA+ 
Sbjct: 344 GRAQVNFNLSLFQNAVDDFTRALALDPENAEAYHQR--ARAFYRLQQYDEAIRDFTEALA 401

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            +P+      RRG A    G+  EA+ D  ++L+  P+ +   + R ++         A 
Sbjct: 402 RDPNNDVLLMRRGVAYRDKGQYDEALADFDQSLQLNPDVSFTYYHRALLFQATGRLERAR 461

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D    + +  E + AY   G      G+ + A     +AI+LD   ++           
Sbjct: 462 ADFDRALTIAPEYRLAYVGRGGLRLEQGDARGALRDCTRAIELDATEID----------- 510

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
                                  AY  R      L  ++ A+ DL + +  DP + +   
Sbjct: 511 -----------------------AYFCRARAAIALRDYRAAVADLDTVIARDPDSADAYR 547

Query: 624 LRASCYHAIGEYREAIKDYDAALDL 648
            R   + A+ +  EA  DY  A++L
Sbjct: 548 ERGRAHQALRDTDEARADYQRAIEL 572


>gi|319902631|ref|YP_004162359.1| hypothetical protein Bache_2837 [Bacteroides helcogenes P 36-108]
 gi|319417662|gb|ADV44773.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           helcogenes P 36-108]
          Length = 682

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 115/257 (44%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    RG A+    + + A +D + AIQ NP    A++ RG
Sbjct: 37  YVLSIQYFNQVINAKPYLYEPYFFRGLAKVNLDDYQGAEADCSAAIQRNPFVVGAYQIRG 96

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D   A++++P +  + H   + + + KD+  A EDL   + +  + 
Sbjct: 97  LARVRQNKFDGAIEDYKTAIKYDPENVVLWHNLTLCHIQKKDYGEAKEDLGKLLTIAPKY 156

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +  +A +   KAI++DR   + WG     Y      ++A   L Q
Sbjct: 157 TRAYLMRGEVSLQQKDTLRALQDFEKAIEMDRYDPDGWGARAIVYLQQGKYKEAEADLDQ 216

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            +++  + +  Y  R L        K A+ D    L IDP N    Y R      +G+  
Sbjct: 217 SIHLSAKNAGNYINRALARFHQNNLKGAMNDYDLALDIDPDNFLGHYNRGLLRAQVGDDN 276

Query: 637 EAIKDYDAALDLELDSM 653
            AI+D+D  L  E D+M
Sbjct: 277 RAIEDFDFVLKTEPDNM 293



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 73/161 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I  + +GKY  A +  DQ +          I R  AR  Q  L+ A++D+  A+  +
Sbjct: 196 ARAIVYLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNNLKGAMNDYDLALDID 255

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P        RG  RA +G+   AI+D    L+ EP++      RGI+  +  D+  A+ D
Sbjct: 256 PDNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKTEPDNMMATFNRGILRSQTGDYRGAIND 315

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            S  +       + Y +   A   IG+ K AE+   K +++
Sbjct: 316 YSKVINEYPNFLAGYYHRAEARKKIGDRKGAEQDEFKIMKM 356



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 9/236 (3%)

Query: 458 ARAAL--GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           AR AL   + V +IQ  ++ +  +P   +    RG+      D+  A  D SA ++ +  
Sbjct: 28  ARNALYFEDYVLSIQYFNQVINAKPYLYEPYFFRGLAKVNLDDYQGAEADCSAAIQRNPF 87

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   GLA     ++  A E +  AI+ D   +  W +LT  +    +  +A E L 
Sbjct: 88  VVGAYQIRGLARVRQNKFDGAIEDYKTAIKYDPENVVLWHNLTLCHIQKKDYGEAKEDLG 147

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           ++L I  ++++AY +RG +        +A++D    + +D  + +    RA  Y   G+Y
Sbjct: 148 KLLTIAPKYTRAYLMRGEVSLQQKDTLRALQDFEKAIEMDRYDPDGWGARAIVYLQQGKY 207

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +EA  D D ++ L   +   ++ + LA + +       + +      +D+  DIDP
Sbjct: 208 KEAEADLDQSIHLSAKNAGNYINRALARFHQ-------NNLKGAMNDYDLALDIDP 256



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 34/202 (16%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           +  + +  Y  A     ++L   P Y  A + RG     Q++   A+ DF +AI+ +   
Sbjct: 131 LCHIQKKDYGEAKEDLGKLLTIAPKYTRAYLMRGEVSLQQKDTLRALQDFEKAIEMDRYD 190

Query: 449 GEAWKRRG----------QARAALGESVE------------------------AIQDLSK 474
            + W  R           +A A L +S+                         A+ D   
Sbjct: 191 PDGWGARAIVYLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNNLKGAMNDYDL 250

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           AL+ +P++    + RG++  +  D N A+ED    +K + +N  A    G+  S  G+Y+
Sbjct: 251 ALDIDPDNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKTEPDNMMATFNRGILRSQTGDYR 310

Query: 535 KAEEAHLKAIQLDRNFLEAWGH 556
            A   + K I    NFL  + H
Sbjct: 311 GAINDYSKVINEYPNFLAGYYH 332



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D +++  P +      RG   +  ++  AA+SD+ +AI+ NP   EA+  RG     LG
Sbjct: 591 LDHVVRLAPDFVYGYYNRGNVLSLLKDYRAALSDYDKAIELNPDLAEAYFNRGLTHVFLG 650

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            + + I DLSKA E    SA
Sbjct: 651 NNKQGIADLSKAGELGIVSA 670



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 46/94 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD +LK +P    A   RG  R+   +   AI+D+++ I   
Sbjct: 264 NRGLLRAQVGDDNRAIEDFDFVLKTEPDNMMATFNRGILRSQTGDYRGAINDYSKVINEY 323

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           P+    +  R +AR  +G+   A QD  K ++ +
Sbjct: 324 PNFLAGYYHRAEARKKIGDRKGAEQDEFKIMKMQ 357



 Score = 40.4 bits (93), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 13/157 (8%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQ-ILKEDPMYPEALIGRGTARAFQREL---EAAISDFT 439
           R  RG+       +AS+I  F Q IL +D  +P A   R   R  Q E    EAA++D  
Sbjct: 508 RFMRGLDFYLVQDFASSIDDFTQSILLDDTFFP-AYFMRALVRYKQLEYQKAEAAMND-- 564

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
                  S   A  +R + +A   E V+  +DL   +   P+     + RG V    KD+
Sbjct: 565 ----GATSGTVAEPKRAEVKAIDYEIVK--KDLDHVVRLAPDFVYGYYNRGNVLSLLKDY 618

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
            AA+ D    ++L+ +   AY   GL    +G  K+ 
Sbjct: 619 RAALSDYDKAIELNPDLAEAYFNRGLTHVFLGNNKQG 655


>gi|333987252|ref|YP_004519859.1| hypothetical protein MSWAN_1037 [Methanobacterium sp. SWAN-1]
 gi|333825396|gb|AEG18058.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 369

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 127/266 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+G+     GKYA A+  +D+ ++   +  +    +GT          ++  F +A++ N
Sbjct: 88  SKGVISQELGKYAEAVGYYDKAIELGFISSDIFYRKGTVLTELGRYGMSMEPFDKALKIN 147

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +AW  R      L    EA++    AL+ +P + +    + +       +  ++E 
Sbjct: 148 PNFVDAWNDRAMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEY 207

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L   ++++ ++ S +   G+ L+ +G Y++A     K ++LD     AW    +   +L 
Sbjct: 208 LDKVLEIESQHTSLWASRGILLNQLGRYEEALRCSNKVLKLDPKEPRAWKTKGKSLVELK 267

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+AL+ L++ L +D + S  +  +G+ L  L + K+++      L ++P+N++    +
Sbjct: 268 RPEEALKSLEEALKLDPKSSDVWFNKGIALSQLEKFKESLNCFEKALNLNPNNVQACTAK 327

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
                 +    EA++ YD AL L++D
Sbjct: 328 GLSLEKLENPEEALRSYDKALKLKMD 353



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 133/285 (46%), Gaps = 3/285 (1%)

Query: 373 ISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           ++K   +  D+ L+   +G A V  GK    I   D+ +K DP        +G       
Sbjct: 38  VNKVLELDPDYALAWNLKGGALVGLGKLDEGIKCLDEGIKLDPTLSSLWYSKGVISQELG 97

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +   A+  + +AI+    + + + R+G     LG    +++   KAL+  PN  D  ++R
Sbjct: 98  KYAEAVGYYDKAIELGFISSDIFYRKGTVLTELGRYGMSMEPFDKALKINPNFVDAWNDR 157

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            +V+ +   +  A+E     +K+D +N  A+    +A   + +Y ++ E   K ++++  
Sbjct: 158 AMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEYLDKVLEIESQ 217

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
               W         L   E+AL C  +VL +D +  +A+  +G  L  L + ++A+K L 
Sbjct: 218 HTSLWASRGILLNQLGRYEEALRCSNKVLKLDPKEPRAWKTKGKSLVELKRPEEALKSLE 277

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
             L +DP + +  + +      + +++E++  ++ AL+L  ++++
Sbjct: 278 EALKLDPKSSDVWFNKGIALSQLEKFKESLNCFEKALNLNPNNVQ 322



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 136/295 (46%), Gaps = 7/295 (2%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           +  A+ + +++L+ DP Y  A   +G A     +L+  I    E I+ +P+    W  +G
Sbjct: 31  FKKALGLVNKVLELDPDYALAWNLKGGALVGLGKLDEGIKCLDEGIKLDPTLSSLWYSKG 90

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                LG+  EA+    KA+E    S+DI + +G V  +   +  ++E     +K++   
Sbjct: 91  VISQELGKYAEAVGYYDKAIELGFISSDIFYRKGTVLTELGRYGMSMEPFDKALKINPNF 150

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A+    +    +  Y++A E +  A+++D   +EA+      +  L    ++LE L +
Sbjct: 151 VDAWNDRAMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEYLDK 210

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
           VL I+ + +  +  RG+LL+ LG++++A++  +  L +DP        +      +    
Sbjct: 211 VLEIESQHTSLWASRGILLNQLGRYEEALRCSNKVLKLDPKEPRAWKTKGKSLVELKRPE 270

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           EA+K  + AL L+  S +        ++ K IAL    K       F+   +++P
Sbjct: 271 EALKSLEEALKLDPKSSD-------VWFNKGIALSQLEKFKESLNCFEKALNLNP 318



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 7/140 (5%)

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           YQ L + +KAL  + +VL +D  ++ A++L+G  L GLG+  + IK L  G+ +DP+   
Sbjct: 25  YQSLNSFKKALGLVNKVLELDPDYALAWNLKGGALVGLGKLDEGIKCLDEGIKLDPTLSS 84

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEF 680
             Y +      +G+Y EA+  YD A++L   S +        FY+K   L    +     
Sbjct: 85  LWYSKGVISQELGKYAEAVGYYDKAIELGFISSD-------IFYRKGTVLTELGRYGMSM 137

Query: 681 CWFDIDGDIDPLFKEYWCKR 700
             FD    I+P F + W  R
Sbjct: 138 EPFDKALKINPNFVDAWNDR 157



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 83/171 (48%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +V+  + + +A +   KY  ++   D++L+ +  +      RG         E A+    
Sbjct: 184 NVEAFMGKYMAFMGLDKYPESLEYLDKVLEIESQHTSLWASRGILLNQLGRYEEALRCSN 243

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           + ++ +P    AWK +G++   L    EA++ L +AL+ +P S+D+   +GI   + + F
Sbjct: 244 KVLKLDPKEPRAWKTKGKSLVELKRPEEALKSLEEALKLDPKSSDVWFNKGIALSQLEKF 303

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
             ++      + L+  N  A T  GL+L  +   ++A  ++ KA++L  +F
Sbjct: 304 KESLNCFEKALNLNPNNVQACTAKGLSLEKLENPEEALRSYDKALKLKMDF 354



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 87/201 (43%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R +  +   +Y  A+  +D  LK DP   EA +G+  A     +   ++    + ++   
Sbjct: 157 RAMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLDKYPESLEYLDKVLEIES 216

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                W  RG     LG   EA++  +K L+ +P        +G    + K    A++ L
Sbjct: 217 QHTSLWASRGILLNQLGRYEEALRCSNKVLKLDPKEPRAWKTKGKSLVELKRPEEALKSL 276

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +KLD ++   +   G+ALS + ++K++     KA+ L+ N ++A        + L N
Sbjct: 277 EEALKLDPKSSDVWFNKGIALSQLEKFKESLNCFEKALNLNPNNVQACTAKGLSLEKLEN 336

Query: 567 SEKALECLQQVLYIDKRFSKA 587
            E+AL    + L +   F  A
Sbjct: 337 PEEALRSYDKALKLKMDFEPA 357


>gi|428310178|ref|YP_007121155.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
 gi|428251790|gb|AFZ17749.1| serine/threonine protein kinase [Microcoleus sp. PCC 7113]
          Length = 606

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 118/263 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A     +Y  AI+ +DQ+++      E    R  A    +     +    +A+Q  P
Sbjct: 326 RGKALYQLERYEDAIASYDQVIQFQTDDAEVWFERTQALYRLQSYSEVMMGLDKALQIRP 385

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EAW  RG     L    EAI   +KA+EF+P+ A   + RG++   ++ +  A    
Sbjct: 386 DYAEAWVMRGVVLRNLQRDEEAIACYNKAIEFKPDYAVAWYNRGVLLASWQRYEEAFTAF 445

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L   N  A+   G AL ++  Y+ A  +  +AI  + N+++AW        +L  
Sbjct: 446 DQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCNQAIAFNPNYVQAWFQRGMALGELQR 505

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+    +V+ +   + +A+  RG  L+ L +++ AI      +  +P + E    R 
Sbjct: 506 YEEAITAYDKVIQLQPDYGEAWFQRGFALYNLQRYEDAIASYDQAIEFNPLDAEAWGNRG 565

Query: 627 SCYHAIGEYREAIKDYDAALDLE 649
                +  Y EAI  +D A+ ++
Sbjct: 566 GVLLKLQRYEEAIASFDKAIQIQ 588



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 62/286 (21%), Positives = 127/286 (44%), Gaps = 7/286 (2%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P++L  +       +    AI+ + +AI   P+  +AW  RG+A   L    +AI    +
Sbjct: 286 PQSLFNKAHILCELKRYSEAIAYYEDAILIQPNFYQAWYERGKALYQLERYEDAIASYDQ 345

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
            ++F+ + A++  ER    ++ + ++  +  L   +++  +   A+   G+ L ++   +
Sbjct: 346 VIQFQTDDAEVWFERTQALYRLQSYSEVMMGLDKALQIRPDYAEAWVMRGVVLRNLQRDE 405

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           +A   + KAI+   ++  AW +           E+A     QV+ +    + A++ RG  
Sbjct: 406 EAIACYNKAIEFKPDYAVAWYNRGVLLASWQRYEEAFTAFDQVIQLQPNNAVAWYNRGAA 465

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           L  L +++ AI   +  +  +P+ ++  + R      +  Y EAI  YD  + L+ D  E
Sbjct: 466 LGNLQRYEDAIVSCNQAIAFNPNYVQAWFQRGMALGELQRYEEAITAYDKVIQLQPDYGE 525

Query: 655 KFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                  A++Q+  ALY   +       +D   + +PL  E W  R
Sbjct: 526 -------AWFQRGFALYNLQRYEDAIASYDQAIEFNPLDAEAWGNR 564



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 2/238 (0%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           Y+  +   D+ L+  P Y EA + RG   R  QR+ E AI+ + +AI+  P    AW  R
Sbjct: 370 YSEVMMGLDKALQIRPDYAEAWVMRGVVLRNLQRD-EEAIACYNKAIEFKPDYAVAWYNR 428

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G   A+     EA     + ++ +PN+A   + RG      + +  A+   +  +  +  
Sbjct: 429 GVLLASWQRYEEAFTAFDQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCNQAIAFNPN 488

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              A+   G+AL  +  Y++A  A+ K IQL  ++ EAW        +L   E A+    
Sbjct: 489 YVQAWFQRGMALGELQRYEEAITAYDKVIQLQPDYGEAWFQRGFALYNLQRYEDAIASYD 548

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
           Q +  +   ++A+  RG +L  L ++++AI      + I P+    +Y RA     +G
Sbjct: 549 QAIEFNPLDAEAWGNRGGVLLKLQRYEEAIASFDKAIQIQPNFPMAIYNRAQALSQLG 606



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 112/253 (44%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y+ AI+ ++  +   P + +A   RG A       E AI+ + + IQ      E W  R
Sbjct: 301 RYSEAIAYYEDAILIQPNFYQAWYERGKALYQLERYEDAIASYDQVIQFQTDDAEVWFER 360

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
            QA   L    E +  L KAL+  P+ A+    RG+V    +    A+   +  ++   +
Sbjct: 361 TQALYRLQSYSEVMMGLDKALQIRPDYAEAWVMRGVVLRNLQRDEEAIACYNKAIEFKPD 420

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              A+   G+ L+S   Y++A  A  + IQL  N   AW +      +L   E A+    
Sbjct: 421 YAVAWYNRGVLLASWQRYEEAFTAFDQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCN 480

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           Q +  +  + +A+  RG+ L  L ++++AI      + + P   E  + R    + +  Y
Sbjct: 481 QAIAFNPNYVQAWFQRGMALGELQRYEEAITAYDKVIQLQPDYGEAWFQRGFALYNLQRY 540

Query: 636 REAIKDYDAALDL 648
            +AI  YD A++ 
Sbjct: 541 EDAIASYDQAIEF 553



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 3/230 (1%)

Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           + K+  I  D+    + RG+   N  +   AI+ +++ ++  P Y  A   RG   A  +
Sbjct: 377 LDKALQIRPDYAEAWVMRGVVLRNLQRDEEAIACYNKAIEFKPDYAVAWYNRGVLLASWQ 436

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
             E A + F + IQ  P+   AW  RG A   L    +AI   ++A+ F PN      +R
Sbjct: 437 RYEEAFTAFDQVIQLQPNNAVAWYNRGAALGNLQRYEDAIVSCNQAIAFNPNYVQAWFQR 496

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+   + + +  A+      ++L  +   A+   G AL ++  Y+ A  ++ +AI+ +  
Sbjct: 497 GMALGELQRYEEAITAYDKVIQLQPDYGEAWFQRGFALYNLQRYEDAIASYDQAIEFNPL 556

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
             EAWG+       L   E+A+    + + I   F  A + R   L  LG
Sbjct: 557 DAEAWGNRGGVLLKLQRYEEAIASFDKAIQIQPNFPMAIYNRAQALSQLG 606



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 49/247 (19%), Positives = 95/247 (38%), Gaps = 27/247 (10%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           NS   L  +  +  + K ++ A+      + +      A+   G AL  +  Y+ A  ++
Sbjct: 284 NSPQSLFNKAHILCELKRYSEAIAYYEDAILIQPNFYQAWYERGKALYQLERYEDAIASY 343

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            + IQ   +  E W   TQ    L +  + +  L + L I   +++A+ +RG++L  L +
Sbjct: 344 DQVIQFQTDDAEVWFERTQALYRLQSYSEVMMGLDKALQIRPDYAEAWVMRGVVLRNLQR 403

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE----------- 649
            ++AI   +  +   P      Y R     +   Y EA   +D  + L+           
Sbjct: 404 DEEAIACYNKAIEFKPDYAVAWYNRGVLLASWQRYEEAFTAFDQVIQLQPNNAVAWYNRG 463

Query: 650 -----LDSMEKFVLQC---LAF--------YQKEIALYTASKINSEFCWFDIDGDIDPLF 693
                L   E  ++ C   +AF        +Q+ +AL    +       +D    + P +
Sbjct: 464 AALGNLQRYEDAIVSCNQAIAFNPNYVQAWFQRGMALGELQRYEEAITAYDKVIQLQPDY 523

Query: 694 KEYWCKR 700
            E W +R
Sbjct: 524 GEAWFQR 530


>gi|407416657|gb|EKF37752.1| hypothetical protein MOQ_002047 [Trypanosoma cruzi marinkellei]
          Length = 798

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 129/293 (44%), Gaps = 6/293 (2%)

Query: 370 VTRISKSKSIS----VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
           V  I+ S ++S     +    RG+A   +G Y  AI  +   L+ DP   +AL  RG   
Sbjct: 280 VPTITSSSALSGNEEAELHQQRGLAYRKKGDYLRAIDEYSAALRIDPKNFKALFNRGFCS 339

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSAD 484
               +  AAI D+  A++  P     +   G +    G    EAI    KA+  + N+AD
Sbjct: 340 DKVEDYNAAIRDYEAAMKLEPGYAYTYYNLGISYDRWGGHYKEAIAMFDKAIALDGNNAD 399

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
             H RG    K  ++  AV+D +  + LD ++  AY         +GE   A   + KAI
Sbjct: 400 FYHNRGFSQRKLGNYREAVKDYTMALSLDPQHFKAYYNRAFCYDKLGEGANAIADYTKAI 459

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
            +  +   A+ +     +     + A+    + + +D      Y+ RG++    G+   A
Sbjct: 460 AIQDDNPNAYHNRGAALEKAGRLDDAIADYTRAIQLDDGNPFTYNARGIVYDRRGKSDAA 519

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           ++DL+  + + P+N      RA  +  +  + EA+ DY+ +L L LD  ++F 
Sbjct: 520 LQDLTQAITLSPNNAIFYQNRAFVFQNMERFPEAVHDYNTSLAL-LDEEKRFT 571



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 145/362 (40%), Gaps = 36/362 (9%)

Query: 314 DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRI 373
           D A   D N N++ Y     S  K  +  E+    +     L     +A  N+ FC  ++
Sbjct: 388 DKAIALDGN-NADFYHNRGFSQRKLGNYREAVKDYTMALS-LDPQHFKAYYNRAFCYDKL 445

Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
            +  +   D              Y  AI+I D         P A   RG A      L+ 
Sbjct: 446 GEGANAIAD--------------YTKAIAIQDD-------NPNAYHNRGAALEKAGRLDD 484

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI+D+T AIQ +      +  RG      G+S  A+QDL++A+   PN+A     R  V 
Sbjct: 485 AIADYTRAIQLDDGNPFTYNARGIVYDRRGKSDAALQDLTQAITLSPNNAIFYQNRAFVF 544

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
              + F  AV D +  + L  E K           +  E K  +E  L  + L ++F   
Sbjct: 545 QNMERFPEAVHDYNTSLALLDEEKR------FTNGATTESKATQE--LNRLILKQHFNRG 596

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           + H  +      + E A+     V+  +     A + RG+    +G HK A++D S  + 
Sbjct: 597 FCHARE-----GHYEAAIYDFSMVMATNPDNPVALYNRGICHDKVGNHKLAVEDFSHLIE 651

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTA 673
           +D  N E  + R +   ++GEY  A+ DY  A  L++D         LA ++ E     A
Sbjct: 652 LDAENAEAHFSRGTALESLGEYAMALDDYAVAFKLDVDHSGLVEEGALAKFKSEHHAMVA 711

Query: 674 SK 675
           S+
Sbjct: 712 SQ 713



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG   A  G    AI D S  +   P++   L+ RGI + K  +   AVED S  ++LD 
Sbjct: 595 RGFCHAREGHYEAAIYDFSMVMATNPDNPVALYNRGICHDKVGNHKLAVEDFSHLIELDA 654

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF--LEAWGHLTQF---YQDLANSEK 569
           EN  A+   G AL S+GEY  A + +  A +LD +   L   G L +F   +  +  S++
Sbjct: 655 ENAEAHFSRGTALESLGEYAMALDDYAVAFKLDVDHSGLVEEGALAKFKSEHHAMVASQR 714

Query: 570 ALECLQQ 576
            L  L++
Sbjct: 715 VLRLLKE 721



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           A+ LRG+    L    KAI D ++ L IDPS+    Y RA+C++  G Y  AI DY+ A 
Sbjct: 118 AFFLRGICHVKLSCIDKAIADFTAALDIDPSHSRSTYERAACHNRKGNYTAAILDYERA- 176

Query: 647 DLELDSME 654
            L+ DSM 
Sbjct: 177 -LQHDSMH 183


>gi|390441071|ref|ZP_10229255.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis sp. T1-4]
 gi|389835636|emb|CCI33381.1| Similar to tr|Q8YMK7|Q8YMK7 (fragment) [Microcystis sp. T1-4]
          Length = 248

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 56/221 (25%), Positives = 109/221 (49%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           +E AI+ +  A++  P   EAW  RG A   LG   EA+    +ALE +P+  +  + RG
Sbjct: 1   MEEAIASYDRALEFKPDVHEAWYNRGVALGNLGRLEEALASFDRALEIKPDDPEAWYNRG 60

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +       F  A+      +++  ++  A+   G+AL+ +G + +A  +  KA+++  + 
Sbjct: 61  VALADLGRFAEALASFDKALEIKPDDHQAWYNRGVALADLGRFAEALASFDKALEIKPDD 120

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            +AW +      DL   E+A+    + L I      A+  RG +L  +G++K A++    
Sbjct: 121 HQAWYNRGSALDDLGRFEEAIASYDRALEIKPDDPYAWDNRGYVLTCMGRYKDALESCDR 180

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            + I+P++    Y +A CY        AI++   A++L+++
Sbjct: 181 AIKINPNDANPYYNKAVCYGLQNNVELAIENLQRAINLDVE 221



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 59/199 (29%), Positives = 97/199 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A  N G+   A++ FD+ L+  P  PEA   RG A A       A++ F +A++  
Sbjct: 24  NRGVALGNLGRLEEALASFDRALEIKPDDPEAWYNRGVALADLGRFAEALASFDKALEIK 83

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A A LG   EA+    KALE +P+     + RG        F  A+  
Sbjct: 84  PDDHQAWYNRGVALADLGRFAEALASFDKALEIKPDDHQAWYNRGSALDDLGRFEEAIAS 143

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++  ++  A+   G  L+ +G YK A E+  +AI+++ N    + +    Y    
Sbjct: 144 YDRALEIKPDDPYAWDNRGYVLTCMGRYKDALESCDRAIKINPNDANPYYNKAVCYGLQN 203

Query: 566 NSEKALECLQQVLYIDKRF 584
           N E A+E LQ+ + +D  +
Sbjct: 204 NVELAIENLQRAINLDVEY 222


>gi|239832614|ref|ZP_04680943.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
 gi|444309662|ref|ZP_21145294.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
 gi|239824881|gb|EEQ96449.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
 gi|443486929|gb|ELT49699.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
          Length = 295

 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V  
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALV-- 123

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
                                    Y Y+G       +  +A + + KAIQL+  +  A+
Sbjct: 124 -------------------------YRYMG-------DSTRAAQDYSKAIQLNPQYDAAY 151

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                 Y+     ++AL    Q + +     +AYH RGL+    GQHK+AI+D S  + +
Sbjct: 152 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAVSL 211

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 260



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 90/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A  D+++AIQ NP
Sbjct: 86  RGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTRAAQDYSKAIQLNP 145

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+  +       H RG++         A+ED 
Sbjct: 146 QYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDF 205

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  V L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 206 SKAVSLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 265

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 266 KAKAANSYSRAVQLDPKYQPA 286



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 97/216 (44%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYR 125

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G+S  A QD SKA++  P        RG V  +    + A+ D +  + L   +  AY
Sbjct: 126 YMGDSTRAAQDYSKAIQLNPQYDAAYIGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAY 185

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G++K+A E   KA+ L+    E +      Y  L + + A +     + +
Sbjct: 186 HNRGLIYQAKGQHKQAIEDFSKAVSLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 245

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    S  + +DP
Sbjct: 246 DQNVAESWANQALVYEHNGDKAKAANSYSRAVQLDP 281



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 60/135 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG      G+   A+S F+Q +        A   RG     + + + AI DF++A+  
Sbjct: 152 IGRGNVYRQAGRLDQALSDFNQAIALQTTDGRAYHNRGLIYQAKGQHKQAIEDFSKAVSL 211

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N +A E +  RG +  ALG+   A  D + A+  + N A+    + +V     D   A  
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGDKAKAAN 271

Query: 505 DLSACVKLDKENKSA 519
             S  V+LD + + A
Sbjct: 272 SYSRAVQLDPKYQPA 286


>gi|427722550|ref|YP_007069827.1| hypothetical protein Lepto7376_0567 [Leptolyngbya sp. PCC 7376]
 gi|427354270|gb|AFY36993.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 493

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 122/255 (47%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  AI  +DQ LK +P    +   +G      ++   AI  +++A+   P++ E W +
Sbjct: 118 GKYEEAIDSYDQALKLEPDDYLSWDNKGDLLKELKQYHEAIQSYSKALVIKPNSAEIWYK 177

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG     L +  +A+ + SKALE   NS  IL  RG +  + + F  A+   +  ++L  
Sbjct: 178 RGLVFELLSQDNDALMNYSKALEINQNSPHILCARGSILVRLERFQEALMCFNRAIELKA 237

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+++ G  L  + + + A  ++ +A+ ++ N    W H    +      ++ L   
Sbjct: 238 DCVEAWSHKGFLLEQLKKIEDAIFSYGQALAVNPNQEILWYHRGNLFLRQKQYQRGLHSY 297

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            +VL +++   ++ + +G+ L+ LG    A K     L I+P        +     AIG+
Sbjct: 298 DEVLRLNREHYQSLNNKGVSLYKLGDVHGAFKCFQKVLEINPYAFSAWNNQGQICKAIGD 357

Query: 635 YREAIKDYDAALDLE 649
           Y+EAI  YD AL +E
Sbjct: 358 YQEAIICYDKALKVE 372



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 126/279 (45%), Gaps = 2/279 (0%)

Query: 351 KWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKE 410
           K D+LKE     +  + +    + K  S  + ++  RG+      +   A+  + + L+ 
Sbjct: 144 KGDLLKELKQYHEAIQSYSKALVIKPNSAEIWYK--RGLVFELLSQDNDALMNYSKALEI 201

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           +   P  L  RG+        + A+  F  AI+      EAW  +G     L +  +AI 
Sbjct: 202 NQNSPHILCARGSILVRLERFQEALMCFNRAIELKADCVEAWSHKGFLLEQLKKIEDAIF 261

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
              +AL   PN   + + RG +  + K +   +      ++L++E+  +    G++L  +
Sbjct: 262 SYGQALAVNPNQEILWYHRGNLFLRQKQYQRGLHSYDEVLRLNREHYQSLNNKGVSLYKL 321

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G+   A +   K ++++     AW +  Q  + + + ++A+ C  + L ++ + SK +  
Sbjct: 322 GDVHGAFKCFQKVLEINPYAFSAWNNQGQICKAIGDYQEAIICYDKALKVEPKQSKIWSK 381

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           RGL L  LG +++AI      + +D S  E LY +A+ +
Sbjct: 382 RGLCLAKLGHYEEAINSFQQAIQLDKSYAEALYAQAAVF 420



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 10/174 (5%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG   + + +Y   +  +D++L+ +  + ++L  +G +     ++  A   F + ++ NP
Sbjct: 280 RGNLFLRQKQYQRGLHSYDEVLRLNREHYQSLNNKGVSLYKLGDVHGAFKCFQKVLEINP 339

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            A  AW  +GQ   A+G+  EAI    KAL+ EP  + I  +RG+   K   +  A+   
Sbjct: 340 YAFSAWNNQGQICKAIGDYQEAIICYDKALKVEPKQSKIWSKRGLCLAKLGHYEEAINSF 399

Query: 507 SACVKLDKENKSAY----------TYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
              ++LDK    A             L LAL  +G+   A   +++  QLDRNF
Sbjct: 400 QQAIQLDKSYAEALYAQAAVFAVQQNLQLALEYLGKAISANPKYIQVAQLDRNF 453


>gi|422302483|ref|ZP_16389846.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
 gi|389788307|emb|CCI16150.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
          Length = 707

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 132/264 (50%), Gaps = 3/264 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEAAISDFTEAIQSNP-SAGEAWK 453
           +Y  A++ + Q LK +P Y EAL G+  A  A QR  EA ++ + +AIQ NP SA  AW 
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALQRYSEA-LNTYEKAIQINPDSAWAAWL 405

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG+A   LG++ EA+    + L F P ++     +  +  + + ++AA + L   +   
Sbjct: 406 GRGEALDKLGKNQEALASFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
           + +   +   G +L ++ +Y+ A +A+ +A+ ++ +    W      +  L     ALE 
Sbjct: 466 QNDAKIWYKKGWSLQNLEDYEGAVKAYEQALAIEPDNALIWYQKGNSFYQLNKINDALES 525

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             +    + +FS+A++ +G++L  LG+  +A++  +     + +  +    + +  H + 
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLGRKSEALQAFTQATEANSNYYQAWLNQGALLHQME 585

Query: 634 EYREAIKDYDAALDLELDSMEKFV 657
            ++EAI  Y+ A  +     E F+
Sbjct: 586 RFQEAIASYEKARRISSQKAEVFI 609



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 123/262 (46%), Gaps = 5/262 (1%)

Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y+ A++ +++ ++ +P     A +GRG A     + + A++ F   +  NP+A +AW+ 
Sbjct: 381 RYSEALNTYEKAIQINPDSAWAAWLGRGEALDKLGKNQEALASFDRVLSFNPAASQAWQG 440

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      L +   A + L K L F+ N A I +++G      +D+  AV+     + ++ 
Sbjct: 441 KADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYEQALAIEP 500

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
           +N   +   G +   + +   A E++ KA Q +  F +A  H +Q    Q L    +AL+
Sbjct: 501 DNALIWYQKGNSFYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLGRKSEALQ 558

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              Q    +  + +A+  +G LLH + + ++AI        I     E      + ++ +
Sbjct: 559 AFTQATEANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRL 618

Query: 633 GEYREAIKDYDAALDLELDSME 654
           G+Y +AI  Y  A+  + D+ E
Sbjct: 619 GDYPQAINAYQQAIQRQKDNPE 640



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 119/263 (45%), Gaps = 2/263 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A    GK   A++ FD++L  +P   +A  G+       ++  AA     + +  
Sbjct: 405 LGRGEALDKLGKNQEALASFDRVLSFNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             +  + W ++G +   L +   A++   +AL  EP++A I +++G   ++    N A+E
Sbjct: 465 QQNDAKIWYKKGWSLQNLEDYEGAVKAYEQALAIEPDNALIWYQKGNSFYQLNKINDALE 524

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
             S   + + +   A+   G+ L  +G   +A +A  +A + + N+ +AW +       +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRKSEALQAFTQATEANSNYYQAWLNQGALLHQM 584

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY- 623
              ++A+   ++   I  + ++ +   G   + LG + +AI      +     N E    
Sbjct: 585 ERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYPQAINAYQQAIQRQKDNPETWKS 644

Query: 624 LRASCYHAIGEYREAIKDYDAAL 646
           L  SC+  +G+Y  AI+ Y  +L
Sbjct: 645 LGNSCFK-LGQYERAIQAYQESL 666



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 9/216 (4%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           NS D  +++G   ++ K +  A+      +K++ +   A      AL ++  Y +A   +
Sbjct: 331 NSLD-YYQQGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALQRYSEALNTY 389

Query: 541 LKAIQLDRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
            KAIQ++ +    AW    +    L  +++AL    +VL  +   S+A+  +  +   L 
Sbjct: 390 EKAIQINPDSAWAAWLGRGEALDKLGKNQEALASFDRVLSFNPAASQAWQGKADIYLELQ 449

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
           Q+  A K L   L    ++ +  Y +      + +Y  A+K Y+ AL +E D+       
Sbjct: 450 QYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYEQALAIEPDN------- 502

Query: 660 CLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
            L +YQK  + Y  +KIN     +   G  +P F +
Sbjct: 503 ALIWYQKGNSFYQLNKINDALESYSKAGQFNPQFSQ 538



 Score = 43.5 bits (101), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 55/116 (47%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+  FT+A ++N +  +AW  +G     +    EAI    KA       A++    G   
Sbjct: 556 ALQAFTQATEANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAW 615

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           ++  D+  A+      ++  K+N   +  LG +   +G+Y++A +A+ ++++   N
Sbjct: 616 YRLGDYPQAINAYQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSN 671



 Score = 40.8 bits (94), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 92/200 (46%), Gaps = 10/200 (5%)

Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
           LN  N   ESYSK+   + + S +  S+  +      L++   +++  + F  T+ +++ 
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGII------LQKLGRKSEALQAF--TQATEAN 567

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S      L++G       ++  AI+ +++  +      E  IG G A     +   AI+ 
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYPQAINA 627

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +AIQ      E WK  G +   LG+   AIQ   ++L +  N  ++  ++ +   +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687

Query: 498 DFNAAVEDLSACVKLDKENK 517
           +   ++++ +   K+D E +
Sbjct: 688 ELQQSLQNQTP--KVDSEEQ 705


>gi|225619120|ref|YP_002720346.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225213939|gb|ACN82673.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 357

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 131/268 (48%), Gaps = 1/268 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           SV+   +RG+A+ + G Y  AI  F +++  +P Y  A    G  +      E AI+ + 
Sbjct: 37  SVELYNNRGLAKSSLGMYEEAIDDFQKVIHINPHYVNAYNNIGLVKHNLGMYEEAINFYK 96

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +A+  + +  +A    G A   LG   EAI+   KA+E  PN     +  G++      +
Sbjct: 97  KALDIDNNCIQACNNIGLANHNLGMYEEAIKYYIKAIEISPN-VHTYNNIGLIKNDLGMY 155

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+E  +  ++LD     AY  +GL+  ++  Y +A +   K ++LD   + A+ ++  
Sbjct: 156 EEAIEYFNKVIRLDDHYIKAYYNIGLSKYNLKNYDEALDYFNKVLELDSKNVHAYNNIGI 215

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             QDL    +ALE   + L +DK +SKAY+ RGL L  L  ++ A+ D +  L ++P+  
Sbjct: 216 IKQDLKLHNEALEYFNRALLLDKNYSKAYYNRGLSLLELELYECALADFNGCLELEPNYY 275

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALD 647
                R      +  Y EA++D++  ++
Sbjct: 276 PAYCKRGEVKLKLKNYEEAVEDFNKYIE 303



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 1/270 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S+D  L       N   Y  ++  FDQ++       E    RG A++     E AI DF 
Sbjct: 3   SIDNLLELANKAFNSADYKKSLEYFDQLIFYYGDSVELYNNRGLAKSSLGMYEEAIDDFQ 62

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           + I  NP    A+   G  +  LG   EAI    KAL+ + N     +  G+ N     +
Sbjct: 63  KVIHINPHYVNAYNNIGLVKHNLGMYEEAINFYKKALDIDNNCIQACNNIGLANHNLGMY 122

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A++     +++   N   Y  +GL  + +G Y++A E   K I+LD ++++A+ ++  
Sbjct: 123 EEAIKYYIKAIEI-SPNVHTYNNIGLIKNDLGMYEEAIEYFNKVIRLDDHYIKAYYNIGL 181

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +L N ++AL+   +VL +D +   AY+  G++   L  H +A++  +  L +D +  
Sbjct: 182 SKYNLKNYDEALDYFNKVLELDSKNVHAYNNIGIIKQDLKLHNEALEYFNRALLLDKNYS 241

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +  Y R      +  Y  A+ D++  L+LE
Sbjct: 242 KAYYNRGLSLLELELYECALADFNGCLELE 271



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 62/122 (50%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI + +   +  A+  F++ L  D  Y +A   RG +       E A++DF   ++  P+
Sbjct: 214 GIIKQDLKLHNEALEYFNRALLLDKNYSKAYYNRGLSLLELELYECALADFNGCLELEPN 273

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+ +RG+ +  L    EA++D +K +E+    + I   RG   +K KD+N A++D +
Sbjct: 274 YYPAYCKRGEVKLKLKNYEEAVEDFNKYIEYGNPDSKIYFYRGYAEYKLKDYNNALKDFN 333

Query: 508 AC 509
            C
Sbjct: 334 MC 335



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 35/205 (17%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           NS D L E     F   D+  ++E     +    ++   Y   GLA SS+G Y++A +  
Sbjct: 2   NSIDNLLELANKAFNSADYKKSLEYFDQLIFYYGDSVELYNNRGLAKSSLGMYEEAIDDF 61

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            K I ++ +++ A+ ++     +L   E+A+   ++ L ID    +A +  GL  H LG 
Sbjct: 62  QKVIHINPHYVNAYNNIGLVKHNLGMYEEAINFYKKALDIDNNCIQACNNIGLANHNLGM 121

Query: 601 HKKAIKDLSSGLGIDP-----SNIECL-----------------------YLRASCYHAI 632
           +++AIK     + I P     +NI  +                       Y++A  Y+ I
Sbjct: 122 YEEAIKYYIKAIEISPNVHTYNNIGLIKNDLGMYEEAIEYFNKVIRLDDHYIKA--YYNI 179

Query: 633 GEYREAIKDYDAALD-----LELDS 652
           G  +  +K+YD ALD     LELDS
Sbjct: 180 GLSKYNLKNYDEALDYFNKVLELDS 204


>gi|254417207|ref|ZP_05030952.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196176013|gb|EDX71032.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 260

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 117/234 (50%), Gaps = 4/234 (1%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P ALIG       Q +   A+++   A Q  P+  +      + +A  G+   AI DL++
Sbjct: 9   PAALIGTAIVWV-QPQFAVALTNLVVAQQ--PTV-QNLINSARIKAEKGDYQGAIADLTQ 64

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           AL+  PN+A+  H R    ++ +++  A+ D +  ++L+ ++  AY   G+  S +G+Y+
Sbjct: 65  ALQLSPNNAESYHRRANAYYQLENYQGAIADYNQAIQLNPDDVKAYYNRGITHSHLGDYQ 124

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
            A     +AIQL+ +F  A+ +      +L + + A+    Q + ++  ++ AY+ RG+ 
Sbjct: 125 GAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADYNQAIKLNPDYAIAYNNRGVA 184

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              LG  + AI D +  +  +P N    Y R   Y  +G+  +A++D+  A  L
Sbjct: 185 RSNLGDDQGAIADFNQAIQRNPDNANVYYNRGVAYLNLGDQPKALEDFRQAATL 238



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 108/209 (51%), Gaps = 1/209 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A+++ + ++ + P   + LI     +A + + + AI+D T+A+Q +P+  E++ RR  A 
Sbjct: 25  AVALTNLVVAQQPTV-QNLINSARIKAEKGDYQGAIADLTQALQLSPNNAESYHRRANAY 83

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             L     AI D ++A++  P+     + RGI +    D+  A+ D +  ++L+ +  +A
Sbjct: 84  YQLENYQGAIADYNQAIQLNPDDVKAYYNRGITHSHLGDYQGAIADFNQAIQLNPDFAAA 143

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   GLA  ++G+ + A   + +AI+L+ ++  A+ +      +L + + A+    Q + 
Sbjct: 144 YYNRGLARFNLGDDQGAIADYNQAIKLNPDYAIAYNNRGVARSNLGDDQGAIADFNQAIQ 203

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            +   +  Y+ RG+    LG   KA++D 
Sbjct: 204 RNPDNANVYYNRGVAYLNLGDQPKALEDF 232



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/186 (29%), Positives = 92/186 (49%)

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           +  +G Y  AI+   Q L+  P   E+   R  A       + AI+D+ +AIQ NP   +
Sbjct: 49  KAEKGDYQGAIADLTQALQLSPNNAESYHRRANAYYQLENYQGAIADYNQAIQLNPDDVK 108

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+  RG   + LG+   AI D ++A++  P+ A   + RG+  F   D   A+ D +  +
Sbjct: 109 AYYNRGITHSHLGDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADYNQAI 168

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           KL+ +   AY   G+A S++G+ + A     +AIQ + +    + +    Y +L +  KA
Sbjct: 169 KLNPDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPDNANVYYNRGVAYLNLGDQPKA 228

Query: 571 LECLQQ 576
           LE  +Q
Sbjct: 229 LEDFRQ 234



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 2/140 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI   + G Y  AI+ F+Q ++ +P +  A   RG AR    + + AI+D+ +AI+ N
Sbjct: 112 NRGITHSHLGDYQGAIADFNQAIQLNPDFAAAYYNRGLARFNLGDDQGAIADYNQAIKLN 171

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG AR+ LG+   AI D ++A++  P++A++ + RG+      D   A+ED
Sbjct: 172 PDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPDNANVYYNRGVAYLNLGDQPKALED 231

Query: 506 LSACVKLDKE--NKSAYTYL 523
                 L ++  N   Y Y+
Sbjct: 232 FRQAATLFQQQGNTEIYQYI 251



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 5/176 (2%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI+ ++Q ++ +P   +A   RG   +   + + AI+DF +AIQ NP    A+  RG
Sbjct: 89  YQGAIADYNQAIQLNPDDVKAYYNRGITHSHLGDYQGAIADFNQAIQLNPDFAAAYYNRG 148

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR  LG+   AI D ++A++  P+ A   + RG+      D   A+ D +  ++ + +N
Sbjct: 149 LARFNLGDDQGAIADYNQAIKLNPDYAIAYNNRGVARSNLGDDQGAIADFNQAIQRNPDN 208

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
            + Y   G+A  ++G+  KA E   +A  L     +  G+ T+ YQ +    + LE
Sbjct: 209 ANVYYNRGVAYLNLGDQPKALEDFRQAATL----FQQQGN-TEIYQYIQQIIRRLE 259


>gi|425441210|ref|ZP_18821493.1| TPR repeat:TPR repeat [Microcystis aeruginosa PCC 9717]
 gi|389718158|emb|CCH97859.1| TPR repeat:TPR repeat [Microcystis aeruginosa PCC 9717]
          Length = 506

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 22/320 (6%)

Query: 275 RQSSDDFDICNG----PIDKASVNERHGRQT---NGTHDVHDKLSSDSASLNDSNTNSES 327
           R++SD FD  +G    P DK  + ER  R+    +G  D + + +        +      
Sbjct: 173 RRASDFFDWYSGVYEFPTDK-DILEREIRRLVYLDGDLDTYQQFTPQQRQEKLAEI---- 227

Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR--- 384
             K+ +SD+ S D  ++ S+L  K  ++ +   E ++     +    K+  I  D+    
Sbjct: 228 --KAYLSDSPSLDPVQT-SELWHKKGLIHQMGKEYEQ----AIASYDKALEIKPDYHEAW 280

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+A  N G+   AI+ +DQ L+  P Y EA   RG A       E AI+ +  A++ 
Sbjct: 281 YNRGVALGNLGRLEEAIASYDQALEFKPDYHEAWNNRGIALRNLGRFEQAIASYDRALEF 340

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   EAW  RG A   LG   +AI    +ALEF+P+  +  + RGI          A+ 
Sbjct: 341 KPDKHEAWNNRGNALFNLGRFEQAIASYDQALEFKPDYHEAWYNRGIALGNLGRLAEAIA 400

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++   +   A+   G AL ++G  ++A  ++ +A++++ N+   + +    Y   
Sbjct: 401 SYDRALEFKPDFHEAWYNRGNALGNLGRLEQAIASYDRALEINSNYANTYYNKACCYGLQ 460

Query: 565 ANSEKALECLQQVLYIDKRF 584
            N E A+E LQ+ + +D ++
Sbjct: 461 NNVELAIENLQRAINLDVKY 480



 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 2/230 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+      +Y  AI+ +D+ L+  P Y EA   RG A      LE AI+ + +A++  P
Sbjct: 249 KGLIHQMGKEYEQAIASYDKALEIKPDYHEAWYNRGVALGNLGRLEEAIASYDQALEFKP 308

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EAW  RG A   LG   +AI    +ALEF+P+  +  + RG   F    F  A+   
Sbjct: 309 DYHEAWNNRGIALRNLGRFEQAIASYDRALEFKPDKHEAWNNRGNALFNLGRFEQAIASY 368

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++   +   A+   G+AL ++G   +A  ++ +A++   +F EAW +      +L  
Sbjct: 369 DQALEFKPDYHEAWYNRGIALGNLGRLAEAIASYDRALEFKPDFHEAWYNRGNALGNLGR 428

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK-AIKDLSSGLGID 615
            E+A+    + L I+  ++  Y+ +    +GL  + + AI++L   + +D
Sbjct: 429 LEQAIASYDRALEINSNYANTYYNKA-CCYGLQNNVELAIENLQRAINLD 477



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 114/237 (48%), Gaps = 14/237 (5%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G      +E E AI+ + +A++  P   EAW  RG A   LG   EAI    +ALEF+P
Sbjct: 249 KGLIHQMGKEYEQAIASYDKALEIKPDYHEAWYNRGVALGNLGRLEEAIASYDQALEFKP 308

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           +  +  + RGI       F  A+      ++   +   A+   G AL ++G +++A  ++
Sbjct: 309 DYHEAWNNRGIALRNLGRFEQAIASYDRALEFKPDKHEAWNNRGNALFNLGRFEQAIASY 368

Query: 541 LKAIQLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
            +A++   ++ EAW       G+L +  + +A+ ++ALE           F +A++ RG 
Sbjct: 369 DQALEFKPDYHEAWYNRGIALGNLGRLAEAIASYDRALE-------FKPDFHEAWYNRGN 421

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            L  LG+ ++AI      L I+ +     Y +A CY        AI++   A++L++
Sbjct: 422 ALGNLGRLEQAIASYDRALEINSNYANTYYNKACCYGLQNNVELAIENLQRAINLDV 478



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 104/217 (47%), Gaps = 7/217 (3%)

Query: 472 LSKALEFEP-NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           LS +   +P  ++++ H++G+++   K++  A+      +++  +   A+   G+AL ++
Sbjct: 231 LSDSPSLDPVQTSELWHKKGLIHQMGKEYEQAIASYDKALEIKPDYHEAWYNRGVALGNL 290

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G  ++A  ++ +A++   ++ EAW +     ++L   E+A+    + L       +A++ 
Sbjct: 291 GRLEEAIASYDQALEFKPDYHEAWNNRGIALRNLGRFEQAIASYDRALEFKPDKHEAWNN 350

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RG  L  LG+ ++AI      L   P   E  Y R      +G   EAI  YD AL+ + 
Sbjct: 351 RGNALFNLGRFEQAIASYDQALEFKPDYHEAWYNRGIALGNLGRLAEAIASYDRALEFKP 410

Query: 651 DSMEKF-----VLQCLAFYQKEIALY-TASKINSEFC 681
           D  E +      L  L   ++ IA Y  A +INS + 
Sbjct: 411 DFHEAWYNRGNALGNLGRLEQAIASYDRALEINSNYA 447



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 7/177 (3%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GL      EY++A  ++ KA+++  ++ EAW +      +L   E+A+    Q L     
Sbjct: 250 GLIHQMGKEYEQAIASYDKALEIKPDYHEAWYNRGVALGNLGRLEEAIASYDQALEFKPD 309

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           + +A++ RG+ L  LG+ ++AI      L   P   E    R +    +G + +AI  YD
Sbjct: 310 YHEAWNNRGIALRNLGRFEQAIASYDRALEFKPDKHEAWNNRGNALFNLGRFEQAIASYD 369

Query: 644 AALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            AL+ + D  E       A+Y + IAL    ++      +D   +  P F E W  R
Sbjct: 370 QALEFKPDYHE-------AWYNRGIALGNLGRLAEAIASYDRALEFKPDFHEAWYNR 419



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA  N G+ A AI+ +D+ L+  P + EA   RG A      LE AI+ +  A++ N
Sbjct: 384 NRGIALGNLGRLAEAIASYDRALEFKPDFHEAWYNRGNALGNLGRLEQAIASYDRALEIN 443

Query: 446 PSAGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADI 485
            +    +  +      L  +VE AI++L +A+  +    D+
Sbjct: 444 SNYANTYYNKACC-YGLQNNVELAIENLQRAINLDVKYQDM 483


>gi|167763510|ref|ZP_02435637.1| hypothetical protein BACSTE_01884 [Bacteroides stercoris ATCC
           43183]
 gi|167698804|gb|EDS15383.1| tetratricopeptide repeat protein [Bacteroides stercoris ATCC 43183]
          Length = 681

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 117/257 (45%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D  +AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKINLDDFQGAEADCDQAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   A++D   AL+++P +  + H   + + + +DFNAA EDL   + +    
Sbjct: 98  LARIRQDKFDGAVEDYKTALKYDPENVVLWHNLSLCHMQKEDFNAAKEDLGKLLAIAPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +  +A +   KAI +DR   + W          ++ ++A + L Q
Sbjct: 158 TRAYLMRGEVNLKQNDTIQALKDFDKAIDMDRYDPDGWAARAIVRLQQSDYKEAEKDLDQ 217

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            +++  R S  Y  R L        + A+ D    L IDP+N    Y R      +G+  
Sbjct: 218 AIHLSARNSGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDN 277

Query: 637 EAIKDYDAALDLELDSM 653
            AI+D+D  L +E D+M
Sbjct: 278 RAIEDFDFVLKMEPDNM 294



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 8/260 (3%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R +A++N   +  A +  DQ ++ +P    A   RG AR  Q + + A+ D+  A++ +P
Sbjct: 62  RALAKINLDDFQGAEADCDQAIQRNPFVVGAYQIRGLARIRQDKFDGAVEDYKTALKYDP 121

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                W           +   A +DL K L   P        RG VN K  D   A++D 
Sbjct: 122 ENVVLWHNLSLCHMQKEDFNAAKEDLGKLLAIAPRYTRAYLMRGEVNLKQNDTIQALKDF 181

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR----NFLEAWGHLTQFYQ 562
              + +D+ +   +    +      +YK+AE+   +AI L      N++     L +F+Q
Sbjct: 182 DKAIDMDRYDPDGWAARAIVRLQQSDYKEAEKDLDQAIHLSARNSGNYINRA--LARFHQ 239

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +  N   A+      L ID      ++ RGLL   +G   +AI+D    L ++P N+   
Sbjct: 240 N--NLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMAT 297

Query: 623 YLRASCYHAIGEYREAIKDY 642
           + R       G+YR AI DY
Sbjct: 298 FNRGLLRAQTGDYRGAISDY 317



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 6/268 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ + K+  A+  +   LK DP               + +  AA  D  + +   P
Sbjct: 96  RGLARIRQDKFDGAVEDYKTALKYDPENVVLWHNLSLCHMQKEDFNAAKEDLGKLLAIAP 155

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG+      ++++A++D  KA++ +    D    R IV  +  D+  A +DL
Sbjct: 156 RYTRAYLMRGEVNLKQNDTIQALKDFDKAIDMDRYDPDGWAARAIVRLQQSDYKEAEKDL 215

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
              + L   N   Y    LA       + A   +  A+ +D  NFL   GH  +      
Sbjct: 216 DQAIHLSARNSGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFL---GHYNRGLLRAQ 272

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + +  +A+E    VL ++     A   RGLL    G ++ AI D S  +   P+     Y
Sbjct: 273 VGDDNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIEEYPNFTAGYY 332

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            RA     IG+ + A +D    + ++LD
Sbjct: 333 HRAEARKKIGDRKGAEQDEFKLMKMQLD 360



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 3/174 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ +  Y  A    DQ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVRLQQSDYKEAEKDLDQAIHLSARNSGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    L+ EP++      RG++  +  D+  A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAE--EAHLKAIQLD-RNFLEAWGH 556
            S  ++      + Y +   A   IG+ K AE  E  L  +QLD RN +   G+
Sbjct: 317 YSKVIEEYPNFTAGYYHRAEARKKIGDRKGAEQDEFKLMKMQLDKRNGVTTGGN 370



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 74/172 (43%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +     A+  FD+ +  D   P+    R   R  Q + + A  D  +AI  
Sbjct: 162 LMRGEVNLKQNDTIQALKDFDKAIDMDRYDPDGWAARAIVRLQQSDYKEAEKDLDQAIHL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SARNSGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           D    +K++ +N  A    GL  +  G+Y+ A   + K I+   NF   + H
Sbjct: 282 DFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIEEYPNFTAGYYH 333



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 41/258 (15%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           +I  F + I + P   E +  R  A+  L +   A  D  +A++  P        RG+  
Sbjct: 41  SIQYFNQVINAKPYLYEPYFFRALAKINLDDFQGAEADCDQAIQRNPFVVGAYQIRGLAR 100

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +   F+ AVED    +K D EN                                  +  
Sbjct: 101 IRQDKFDGAVEDYKTALKYDPEN----------------------------------VVL 126

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           W +L+  +    +   A E L ++L I  R+++AY +RG +        +A+KD    + 
Sbjct: 127 WHNLSLCHMQKEDFNAAKEDLGKLLAIAPRYTRAYLMRGEVNLKQNDTIQALKDFDKAID 186

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTA 673
           +D  + +    RA       +Y+EA KD D A+ L   +   ++ + LA + +       
Sbjct: 187 MDRYDPDGWAARAIVRLQQSDYKEAEKDLDQAIHLSARNSGNYINRALARFHQ------- 239

Query: 674 SKINSEFCWFDIDGDIDP 691
           + +      +D+  DIDP
Sbjct: 240 NNLRGAMSDYDLALDIDP 257



 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 45/94 (47%)

Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
           A+V    Y    +  D +++  P +      RG   +  ++  AA++D+ +AI  NP   
Sbjct: 576 AEVTAMDYDIVKNDLDHVIQLAPDFVYGYYNRGNVLSLLKDYRAALADYDKAIGLNPDFA 635

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
           EA+  RG     LG + + I DLSKA E    SA
Sbjct: 636 EAYFNRGLTHIFLGNNRQGISDLSKAGELGIVSA 669



 Score = 47.0 bits (110), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 57/134 (42%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   ++ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AI D SK +E  PN     + R     K  D   A +
Sbjct: 290 EPDNMMATFNRGLLRAQTGDYRGAISDYSKVIEEYPNFTAGYYHRAEARKKIGDRKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  LDK N
Sbjct: 350 DEFKLMKMQLDKRN 363



 Score = 44.3 bits (103), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 14/164 (8%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE----EAHLKAI 544
           RG+  +  +DF ++++D +  + LD     AY    L      EYKKAE    E  +   
Sbjct: 511 RGLDFYLVQDFASSIDDFTQSILLDDTFFPAYFMRALVRYKQLEYKKAEAGMNEGAVSGA 570

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           Q  +        +T    D+  ++     L  V+ +   F   Y+ RG +L  L  ++ A
Sbjct: 571 QEVKK-----AEVTAMDYDIVKND-----LDHVIQLAPDFVYGYYNRGNVLSLLKDYRAA 620

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + D    +G++P   E  + R   +  +G  R+ I D   A +L
Sbjct: 621 LADYDKAIGLNPDFAEAYFNRGLTHIFLGNNRQGISDLSKAGEL 664


>gi|456352577|dbj|BAM87022.1| conserved exported hypothetical protein [Agromonas oligotrophica
           S58]
          Length = 431

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 118/250 (47%), Gaps = 11/250 (4%)

Query: 377 KSISVD------FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           ++I++D      +RL   + +   G    A +     +  DP   EA   RG     QR 
Sbjct: 66  RAIALDGKNARAYRLRGDLMREAGGDAGKATADLSMAISLDPNDAEAYELRGVVYTGQRR 125

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           L+ A++D+ +AI+  P   +A+  RG A    G++ +A++D  +A+  +P+       RG
Sbjct: 126 LDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVRDYDEAIRLDPDRPRTFTNRG 185

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--R 548
               K  + + A+ D S  ++ D +    Y   GL  +++ +Y KA   + +AI+L    
Sbjct: 186 AAYKKLGEMDKALADDSEAIRRDPKVPEYYDNRGLTHAAMKDYDKAIADYDQAIRLQPKP 245

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           NFL   G   QF  +L +   AL      L +D  F+  Y+ R +L   +G+  KA+ D 
Sbjct: 246 NFLTNRGDAYQFKNELGS---ALNDYDAALRLDPGFALTYNNRAVLFKKMGERAKALADY 302

Query: 609 SSGLGIDPSN 618
            + L +DP N
Sbjct: 303 EAALRLDPGN 312



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 1/188 (0%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           G   +A++DL +A+  +  +A     RG ++     D   A  DLS  + LD  +  AY 
Sbjct: 55  GGLTQALKDLDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSMAISLDPNDAEAYE 114

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G+  +      +A   + +AI+L  ++ +A+      +    ++EKA+    + + +D
Sbjct: 115 LRGVVYTGQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVRDYDEAIRLD 174

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
               + +  RG     LG+  KA+ D S  +  DP   E    R   + A+ +Y +AI D
Sbjct: 175 PDRPRTFTNRGAAYKKLGEMDKALADDSEAIRRDPKVPEYYDNRGLTHAAMKDYDKAIAD 234

Query: 642 YDAALDLE 649
           YD A+ L+
Sbjct: 235 YDQAIRLQ 242



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 569 KALECLQQVLYIDKRFSKAYHLRG-LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +AL+ L + + +D + ++AY LRG L+    G   KA  DLS  + +DP++ E   LR  
Sbjct: 59  QALKDLDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSMAISLDPNDAEAYELRGV 118

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            Y        A+ DYD A+ L+ D  + +  + +AFY
Sbjct: 119 VYTGQRRLDRALADYDQAIRLKPDYAQAYADRGVAFY 155



 Score = 43.5 bits (101), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 7/135 (5%)

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           ++ KA   L   + +D   ++AY LRG++  G  +  +A+ D    + + P   +    R
Sbjct: 91  DAGKATADLSMAISLDPNDAEAYELRGVVYTGQRRLDRALADYDQAIRLKPDYAQAYADR 150

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDI 685
              ++  G+  +A++DYD A+ L+ D    F  +  A Y+K   +  A   +SE      
Sbjct: 151 GVAFYLRGDNEKAVRDYDEAIRLDPDRPRTFTNRGAA-YKKLGEMDKALADDSEAIRR-- 207

Query: 686 DGDIDPLFKEYWCKR 700
               DP   EY+  R
Sbjct: 208 ----DPKVPEYYDNR 218


>gi|145480427|ref|XP_001426236.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393310|emb|CAK58838.1| unnamed protein product [Paramecium tetraurelia]
          Length = 821

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 16/280 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF--------QRELEAAISD 437
           +RGI   + G    A+  + Q +  DPM P+    RG    +            + A+ D
Sbjct: 367 NRGILYQDIGNIQQALLNYTQAIHLDPMNPKYYYNRGNNNIYGLGNLYGEMGNKDLALLD 426

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK-- 495
           + + IQ NP+  +A+  RG     +G   +A+ D ++AL   P  A     RGI+ F   
Sbjct: 427 YDKVIQLNPNDEKAYCNRGILHKDMGNQEKALLDYNQALILNPMEAITYINRGILRFIKG 486

Query: 496 -FKDFNAAVE----DLSACVKLDKENKSAY-TYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
              +F    E    D +  ++LD  N  AY   +GL    +G+ + A   +  AI LD  
Sbjct: 487 ILNNFMGNKEKSLIDYNKSIELDPLNSFAYINRVGLLYDELGKKEFALVDYNNAIFLDSK 546

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             + +      Y+ L N E+AL  L   + +D +++ AY  RG +   +G  + A+ D S
Sbjct: 547 NSKFYYKRGVLYESLGNKEQALLDLSISIQLDSKYALAYMSRGSIYFEIGNKQFALDDYS 606

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             + +DP      Y R   YH +G   +AI D+  A+ L+
Sbjct: 607 LAIQLDPLKAINYYNRGVLYHELGNNEQAILDFSMAIKLD 646



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 151/334 (45%), Gaps = 27/334 (8%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG------TARAFQRE--LEAAIS 436
           L++G   + E     A++  +Q ++   +    L  RG      +A  FQR+   + +  
Sbjct: 78  LTQGELFLKENLNDQALNDLNQAIELGSLNEVTLYNRGKIVLIKSATVFQRKKMFQESQE 137

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           D  +AIQ NP+ G A+ R G  +   G+  EA++  +KA+E +        +RG +  + 
Sbjct: 138 DCEKAIQINPNYGLAYMRIGNLKHEQGQVYEALKYYNKAIEVDEKCCYAYIKRGEICIQI 197

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
                A++D +  +++D +N   Y   G+    +G  + A   + KAI+LD   ++   H
Sbjct: 198 GQKQQALKDYTTVIQIDPKNAEFYYNRGVLNHDMGNVESALLDYNKAIELDP--MDPKFH 255

Query: 557 LTQFYQD--LANSEKALECLQQVLYIDKRFSKAYHLRGLL--------LHGLGQHKKAIK 606
             +  Q+  + N E+AL    QV+ +D   S+ Y  RG L           +G   +A+ 
Sbjct: 256 FHRGIQNNEMGNKEQALLDYNQVILLDPTHSRTYCNRGFLNLYKIGIVQKNIGNKDQAVV 315

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           D +  + +DPS+    Y R   Y+ +  Y +A+ DYD A  +ELD+ +  +     +Y +
Sbjct: 316 DFNKAIQLDPSSSMFYYNRGVIYYEMKNYDQALLDYDKA--IELDATDPKI-----YYNR 368

Query: 667 EIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            I       I      +     +DP+  +Y+  R
Sbjct: 369 GILYQDIGNIQQALLNYTQAIHLDPMNPKYYYNR 402



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/285 (21%), Positives = 121/285 (42%), Gaps = 50/285 (17%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           + +F  +RG+   + G   SA+  +++ ++ DPM P+    RG         E A+ D+ 
Sbjct: 217 NAEFYYNRGVLNHDMGNVESALLDYNKAIELDPMDPKFHFHRGIQNNEMGNKEQALLDYN 276

Query: 440 EAIQSNPSAGEAWKRRG--------QARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + I  +P+    +  RG          +  +G   +A+ D +KA++ +P+S+   + RG+
Sbjct: 277 QVILLDPTHSRTYCNRGFLNLYKIGIVQKNIGNKDQAVVDFNKAIQLDPSSSMFYYNRGV 336

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           + ++ K+++ A+ D    ++LD  +   Y   G+                          
Sbjct: 337 IYYEMKNYDQALLDYDKAIELDATDPKIYYNRGI-------------------------- 370

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR--------GLLLHGLGQHKK 603
                    YQD+ N ++AL    Q +++D    K Y+ R        G L   +G    
Sbjct: 371 --------LYQDIGNIQQALLNYTQAIHLDPMNPKYYYNRGNNNIYGLGNLYGEMGNKDL 422

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           A+ D    + ++P++ +    R   +  +G   +A+ DY+ AL L
Sbjct: 423 ALLDYDKVIQLNPNDEKAYCNRGILHKDMGNQEKALLDYNQALIL 467



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 41/229 (17%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRG------QARAALGESV--EAIQDLSKALEFEPNSADIL 486
           I+DF       PS  +A   RG      Q    L E++  +A+ DL++A+E    +   L
Sbjct: 55  INDFLHLF---PSNSQALTIRGSFNFLTQGELFLKENLNDQALNDLNQAIELGSLNEVTL 111

Query: 487 HERG-IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           + RG IV  K           SA V   K+                 +++++E   KAIQ
Sbjct: 112 YNRGKIVLIK-----------SATVFQRKK----------------MFQESQEDCEKAIQ 144

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++ N+  A+  +     +     +AL+   + + +D++   AY  RG +   +GQ ++A+
Sbjct: 145 INPNYGLAYMRIGNLKHEQGQVYEALKYYNKAIEVDEKCCYAYIKRGEICIQIGQKQQAL 204

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           KD ++ + IDP N E  Y R    H +G    A+ DY+ A  +ELD M+
Sbjct: 205 KDYTTVIQIDPKNAEFYYNRGVLNHDMGNVESALLDYNKA--IELDPMD 251



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 3/139 (2%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E A+ D + +IQ +     A+  RG     +G    A+ D S A++ +P  A   + RG+
Sbjct: 565 EQALLDLSISIQLDSKYALAYMSRGSIYFEIGNKQFALDDYSLAIQLDPLKAINYYNRGV 624

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA--IQLDRN 549
           +  +  +   A+ D S  +KLD  +  +Y   G+   + G+Y      +L+A  +Q D  
Sbjct: 625 LYHELGNNEQAILDFSMAIKLDPNDVRSYCNRGVIYINRGQYNFGLSDYLRANHLQPDNP 684

Query: 550 FL-EAWGHLTQFYQDLANS 567
           F+ +    L    Q+  NS
Sbjct: 685 FISQVLEQLYSLQQNQPNS 703



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 56/134 (41%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           F   RG+   + G    A+      ++ D  Y  A + RG+        + A+ D++ AI
Sbjct: 550 FYYKRGVLYESLGNKEQALLDLSISIQLDSKYALAYMSRGSIYFEIGNKQFALDDYSLAI 609

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           Q +P     +  RG     LG + +AI D S A++ +PN       RG++      +N  
Sbjct: 610 QLDPLKAINYYNRGVLYHELGNNEQAILDFSMAIKLDPNDVRSYCNRGVIYINRGQYNFG 669

Query: 503 VEDLSACVKLDKEN 516
           + D      L  +N
Sbjct: 670 LSDYLRANHLQPDN 683


>gi|256422077|ref|YP_003122730.1| hypothetical protein Cpin_3056 [Chitinophaga pinensis DSM 2588]
 gi|256036985|gb|ACU60529.1| TPR repeat-containing protein [Chitinophaga pinensis DSM 2588]
          Length = 543

 Score = 92.0 bits (227), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 121/253 (47%), Gaps = 2/253 (0%)

Query: 405 DQILKEDPMYPEALIGRGTARAFQRELEA-AISDFTEAIQSNPSAGEAWKRRGQARAALG 463
           +Q ++E P + E    +GT  +   E  A  I D+T+ I   P    A++ RG   A L 
Sbjct: 265 EQYIEEQP-FTEFYATQGTTYSTLEEKYALTIRDYTKVITLFPGNSAAFRDRGYLYAKLN 323

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
           ++  AI D + A+  +P S+  L  RG +  + K   +A+ DLSA +K+D +    Y   
Sbjct: 324 KTDSAIADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLSAAIKIDPDALQHYYNR 383

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GLA    G Y+ A       I        A+ +    Y  +     A+  + + + +  +
Sbjct: 384 GLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNKPALAIADISKAIDLAPK 443

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            +++Y +RGL       +K+A++D S+ + +DP +      RA  Y  +  Y+ AIKDY 
Sbjct: 444 EAESYAVRGLAYALQADYKQAVQDFSTSIKLDPGSKTIYVNRALAYKYLNNYKAAIKDYT 503

Query: 644 AALDLELDSMEKF 656
            A++L+ + ++ +
Sbjct: 504 QAIELDPNDVDVY 516



 Score = 84.3 bits (207), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 13/222 (5%)

Query: 362 AKRNKKFCVTRISKSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQIL 408
           A R++ +   +++K+ S   DF  +             RG   +   +  SAI+     +
Sbjct: 311 AFRDRGYLYAKLNKTDSAIADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLSAAI 370

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           K DP   +    RG A       E AI+DFT  I   P    A++ RG     + +   A
Sbjct: 371 KIDPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNKPALA 430

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I D+SKA++  P  A+    RG+      D+  AV+D S  +KLD  +K+ Y    LA  
Sbjct: 431 IADISKAIDLAPKEAESYAVRGLAYALQADYKQAVQDFSTSIKLDPGSKTIYVNRALAYK 490

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
            +  YK A + + +AI+LD N ++ +    + Y+ +   + A
Sbjct: 491 YLNNYKAAIKDYTQAIELDPNDVDVYKERGKVYEQMGKKDLA 532



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 110/270 (40%), Gaps = 35/270 (12%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S  FR  RG       K  SAI+ F   +  DP    AL  RG      ++LE+AI+D +
Sbjct: 309 SAAFR-DRGYLYAKLNKTDSAIADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLS 367

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            AI+ +P A + +  RG A    G    AI D +  +   P +A     RG +       
Sbjct: 368 AAIKIDPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYTYVNKP 427

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ D+S  + L  +   +Y   GLA +   +YK+A +    +I+LD            
Sbjct: 428 ALAIADISKAIDLAPKEAESYAVRGLAYALQADYKQAVQDFSTSIKLDPG---------- 477

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
                           + +Y++         R L    L  +K AIKD +  + +DP+++
Sbjct: 478 ---------------SKTIYVN---------RALAYKYLNNYKAAIKDYTQAIELDPNDV 513

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +    R   Y  +G+   A  D+  A  +E
Sbjct: 514 DVYKERGKVYEQMGKKDLAAADFKKAGAVE 543



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 57/273 (20%), Positives = 107/273 (39%), Gaps = 41/273 (15%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH---- 487
           ++ I D+T+ I  +P    A+ +R +A  +  ++ +A++D  KA+  +P++ +  +    
Sbjct: 183 KSVIRDYTKKIGKDPKDDSAYLQRARAYESREKNKQAVKDYKKAIALDPDNTEAYYGLQN 242

Query: 488 ----------------------ERGIVNFKFKDFNAA---------------VEDLSACV 510
                                 E+ I    F +F A                + D +  +
Sbjct: 243 LYLQGKGPKQSSAPADDISDTTEQYIEEQPFTEFYATQGTTYSTLEEKYALTIRDYTKVI 302

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
            L   N +A+   G   + + +   A      AI LD     A G+    Y +    E A
Sbjct: 303 TLFPGNSAAFRDRGYLYAKLNKTDSAIADFTSAITLDPQSSLALGYRGALYIETKQLESA 362

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           +  L   + ID    + Y+ RGL  +  G ++ AI D ++ +   P N      R + Y 
Sbjct: 363 IADLSAAIKIDPDALQHYYNRGLAYYQWGAYEPAIADFTTLITKGPPNAVAYRYRGNLYT 422

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            + +   AI D   A+DL     E + ++ LA+
Sbjct: 423 YVNKPALAIADISKAIDLAPKEAESYAVRGLAY 455



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 120/319 (37%), Gaps = 71/319 (22%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           A    G +   +++  AAI  FT AI  +P+   A+   G A         A   L+KAL
Sbjct: 72  AYYAEGKSYLKEKDYNAAIQSFTAAIAIHPT-DSAYANLGFAYIRKENDKNAFVALNKAL 130

Query: 477 EFEPNSADILHERGIVNFK-------FKDFNAAVE------DLSAC-------------- 509
           +   N A     RG +  K       F DF+ A+       DLS                
Sbjct: 131 DLNGNYAWAYCLRGYLYTKINVPELSFNDFSRAIALNAKGGDLSGAQNAVSDKSVIRDYT 190

Query: 510 --VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL---------- 557
             +  D ++ SAY     A  S  + K+A + + KAI LD +  EA+  L          
Sbjct: 191 KKIGKDPKDDSAYLQRARAYESREKNKQAVKDYKKAIALDPDNTEAYYGLQNLYLQGKGP 250

Query: 558 -----------------------TQFYQDLANSEKALE--------CLQQVLYIDKRFSK 586
                                  T+FY     +   LE           +V+ +    S 
Sbjct: 251 KQSSAPADDISDTTEQYIEEQPFTEFYATQGTTYSTLEEKYALTIRDYTKVITLFPGNSA 310

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           A+  RG L   L +   AI D +S + +DP +   L  R + Y    +   AI D  AA+
Sbjct: 311 AFRDRGYLYAKLNKTDSAIADFTSAITLDPQSSLALGYRGALYIETKQLESAIADLSAAI 370

Query: 647 DLELDSMEKFVLQCLAFYQ 665
            ++ D+++ +  + LA+YQ
Sbjct: 371 KIDPDALQHYYNRGLAYYQ 389



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 40/233 (17%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF-------KFKDFNAA 502
           +A +R       L  ++  +  L+  + +    + ++H R    +       K KD+NAA
Sbjct: 30  QAIRRMKYIPLKLVRNISGLLLLTTTMAYGQTDSLLVHSRSTAYYAEGKSYLKEKDYNAA 89

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           ++  +A + +   + SAY  LG A       K A  A  KA+ L+ N+  AW +      
Sbjct: 90  IQSFTAAIAIHPTD-SAYANLGFAYIRKENDKNAFVALNKALDLNGNY--AWAY------ 140

Query: 563 DLANSEKALECLQQVLYID--------KRFSKAYHL--RGLLLHGLGQ---HKKAIKDLS 609
                     CL+  LY            FS+A  L  +G  L G       K  I+D +
Sbjct: 141 ----------CLRGYLYTKINVPELSFNDFSRAIALNAKGGDLSGAQNAVSDKSVIRDYT 190

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV-LQCL 661
             +G DP +      RA  Y +  + ++A+KDY  A+ L+ D+ E +  LQ L
Sbjct: 191 KKIGKDPKDDSAYLQRARAYESREKNKQAVKDYKKAIALDPDNTEAYYGLQNL 243


>gi|443318899|ref|ZP_21048141.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 6406]
 gi|442781537|gb|ELR91635.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 6406]
          Length = 639

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 3/222 (1%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E E AI+ +  A+   P   +A   RG   A  G+S  A+ DL++ALE  P  A + ++R
Sbjct: 355 ETETAIAHYDAALARMPQNAQALTERGMLNAQRGQSNAALADLTQALEINPKQATLFYQR 414

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G V F   D   A+ED +  ++LD     AY   G A +  G+ + A + + +A+ L  +
Sbjct: 415 GNVRFGVGDIQGALEDYTQALRLDSTLVKAYLNRGSARADWGDEQGAIQDYTQALALSTD 474

Query: 550 F-LEAWGHLTQF--YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
             ++A  +L +   Y ++    +AL+   + + +    S AY  RGL+   LG  + +I+
Sbjct: 475 QEVQAAAYLNRCLSYSNIDQQGQALKDCTEAINLRPSHSLAYENRGLVRRRLGDFQGSIQ 534

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           D +  + I+P + +  Y R     ++ ++  A+ D+  ALDL
Sbjct: 535 DYNIAIQIEPDSPDPYYNRGLTRQSLRDFPGALADFSKALDL 576



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 102/206 (49%), Gaps = 3/206 (1%)

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           R  Q     GE+  AI     AL   P +A  L ERG++N +    NAA+ DL+  ++++
Sbjct: 345 RAAQTAEQAGETETAIAHYDAALARMPQNAQALTERGMLNAQRGQSNAALADLTQALEIN 404

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +  + +   G     +G+ + A E + +A++LD   ++A+ +      D  + + A++ 
Sbjct: 405 PKQATLFYQRGNVRFGVGDIQGALEDYTQALRLDSTLVKAYLNRGSARADWGDEQGAIQD 464

Query: 574 LQQVLYI--DKRFSKAYHL-RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
             Q L +  D+    A +L R L    + Q  +A+KD +  + + PS+      R     
Sbjct: 465 YTQALALSTDQEVQAAAYLNRCLSYSNIDQQGQALKDCTEAINLRPSHSLAYENRGLVRR 524

Query: 631 AIGEYREAIKDYDAALDLELDSMEKF 656
            +G+++ +I+DY+ A+ +E DS + +
Sbjct: 525 RLGDFQGSIQDYNIAIQIEPDSPDPY 550



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 16/259 (6%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+     G+  +A++   Q L+ +P        RG  R    +++ A+ D+T+A++ + 
Sbjct: 380 RGMLNAQRGQSNAALADLTQALEINPKQATLFYQRGNVRFGVGDIQGALEDYTQALRLDS 439

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEF----EPNSADILHERGIVNFKFKDFNAA 502
           +  +A+  RG ARA  G+   AIQD ++AL      E  +A  L+ R +          A
Sbjct: 440 TLVKAYLNRGSARADWGDEQGAIQDYTQALALSTDQEVQAAAYLN-RCLSYSNIDQQGQA 498

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           ++D +  + L   +  AY   GL    +G+++ + + +  AIQ++ +  + + +     Q
Sbjct: 499 LKDCTEAINLRPSHSLAYENRGLVRRRLGDFQGSIQDYNIAIQIEPDSPDPYYNRGLTRQ 558

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            L +   AL    + L ++  +  A + RGLL   LG  + AI DL +      +  +CL
Sbjct: 559 SLRDFPGALADFSKALDLNPEYVFARYDRGLLQAELGNTEAAIADLET------AAQQCL 612

Query: 623 YL-RASCY----HAIGEYR 636
            L R  CY    + +G+ R
Sbjct: 613 SLGRVQCYQDAQYQVGQLR 631



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 3/169 (1%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQIL---KEDPMYPEALIGRGTARAF 427
           T+  +  S  V   L+RG A+ + G    AI  + Q L    +  +   A + R  + + 
Sbjct: 432 TQALRLDSTLVKAYLNRGSARADWGDEQGAIQDYTQALALSTDQEVQAAAYLNRCLSYSN 491

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
             +   A+ D TEAI   PS   A++ RG  R  LG+   +IQD + A++ EP+S D  +
Sbjct: 492 IDQQGQALKDCTEAINLRPSHSLAYENRGLVRRRLGDFQGSIQDYNIAIQIEPDSPDPYY 551

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
            RG+     +DF  A+ D S  + L+ E   A    GL  + +G  + A
Sbjct: 552 NRGLTRQSLRDFPGALADFSKALDLNPEYVFARYDRGLLQAELGNTEAA 600


>gi|334118912|ref|ZP_08493000.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333459142|gb|EGK87757.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 1004

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 119/262 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG    N  +Y  A+  +D+ ++ D  Y  A   RG      +  + A+  +  AI+ + 
Sbjct: 579 RGDVLSNLKRYDKALESYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDA 638

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   AW  RG     L    EA+    +A+E + N       RG V +  K ++ A+   
Sbjct: 639 NYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSY 698

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++LD  N+SA+   G  L  +  Y +A  ++ +AI+LD N   AW +       L  
Sbjct: 699 DRAIELDANNQSAWANRGNVLYKLKRYDEALVSYDRAIELDANNQSAWANQGNVLYKLKR 758

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++AL    + + +D  +   + LRGLLL  L ++++A+      + +D +     +LR 
Sbjct: 759 YDEALVSYDRAIELDANYQLVWFLRGLLLDTLKRYEEALVSYDRAIELDTNYQLVWFLRG 818

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
                +  Y EA+  YD A++L
Sbjct: 819 LLLDTLKRYEEALVSYDRAIEL 840



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 133/296 (44%), Gaps = 8/296 (2%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+   D+ +K D  Y  A   +G      +  + A++    AI+ + +    W  R
Sbjct: 486 RYYEAVECLDKAIKIDSNYVRAWAHKGNVLDSLKRYDEALAFLDRAIELDDNNKFYWFLR 545

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L    EA+    +ALE +PN      +RG V    K ++ A+E     ++LD  
Sbjct: 546 GNVLNNLKRYDEALVSYDRALELDPNYQSAWAKRGDVLSNLKRYDKALESYDRAIELDAN 605

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
            + A+   G  L ++  Y +A  ++ +AI+LD N+  AW +      +L   ++AL    
Sbjct: 606 YRWAWANRGGVLYNLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSYD 665

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + +D  +  A+  RG +L+ L ++ +A+      + +D +N      R +  + +  Y
Sbjct: 666 RAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANNQSAWANRGNVLYKLKRY 725

Query: 636 REAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTAS---KINSEFCWF 683
            EA+  YD A++L+ ++   +     VL  L  Y + +  Y  +     N +  WF
Sbjct: 726 DEALVSYDRAIELDANNQSAWANQGNVLYKLKRYDEALVSYDRAIELDANYQLVWF 781



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 115/261 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    N  +Y  A+  +D+ ++ D  Y  A   RG      +  + A+  +  AI+ +
Sbjct: 612 NRGGVLYNLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELD 671

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +   AW  RG     L    EA+    +A+E + N+      RG V +K K ++ A+  
Sbjct: 672 ANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANNQSAWANRGNVLYKLKRYDEALVS 731

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++LD  N+SA+   G  L  +  Y +A  ++ +AI+LD N+   W         L 
Sbjct: 732 YDRAIELDANNQSAWANQGNVLYKLKRYDEALVSYDRAIELDANYQLVWFLRGLLLDTLK 791

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+AL    + + +D  +   + LRGLLL  L ++++A+      + +   +    + R
Sbjct: 792 RYEEALVSYDRAIELDTNYQLVWFLRGLLLDTLKRYEEALVSYDRAIELGDLSSYFFFYR 851

Query: 626 ASCYHAIGEYREAIKDYDAAL 646
           A     +  + E +   D A 
Sbjct: 852 AIAILGLNRWDEGLVALDHAF 872



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 124/275 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG    N  +Y  A+  +D+ L+ DP Y  A   RG   +  +  + A+  +  AI+ + 
Sbjct: 545 RGNVLNNLKRYDEALVSYDRALELDPNYQSAWAKRGDVLSNLKRYDKALESYDRAIELDA 604

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   AW  RG     L    EA+    +A+E + N       RG V +  K ++ A+   
Sbjct: 605 NYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSY 664

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++LD   + A+   G  L ++  Y +A  ++ +AI+LD N   AW +       L  
Sbjct: 665 DRAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELDANNQSAWANRGNVLYKLKR 724

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++AL    + + +D     A+  +G +L+ L ++ +A+      + +D +     +LR 
Sbjct: 725 YDEALVSYDRAIELDANNQSAWANQGNVLYKLKRYDEALVSYDRAIELDANYQLVWFLRG 784

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
                +  Y EA+  YD A++L+ +    + L+ L
Sbjct: 785 LLLDTLKRYEEALVSYDRAIELDTNYQLVWFLRGL 819



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 8/233 (3%)

Query: 425 RAFQRELEAAIS--DFTEAIQSN----PSAGEA--WKRRGQARAALGESVEAIQDLSKAL 476
           +A+  E+E  I   D+  A++       S GEA  W  +G   + L    EA++ L KA+
Sbjct: 439 KAYFDEIENCIEQKDYVSALEYAEKLVASRGEAKDWSVKGYCLSRLERYYEAVECLDKAI 498

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           + + N       +G V    K ++ A+  L   ++LD  NK  +   G  L+++  Y +A
Sbjct: 499 KIDSNYVRAWAHKGNVLDSLKRYDEALAFLDRAIELDDNNKFYWFLRGNVLNNLKRYDEA 558

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
             ++ +A++LD N+  AW        +L   +KALE   + + +D  +  A+  RG +L+
Sbjct: 559 LVSYDRALELDPNYQSAWAKRGDVLSNLKRYDKALESYDRAIELDANYRWAWANRGGVLY 618

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            L ++ +A+      + +D +       R    + +  Y EA+  YD A++L+
Sbjct: 619 NLKRYDEALVSYDRAIELDANYRWAWANRGGVLYNLKRYDEALVSYDRAIELD 671



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 45/82 (54%)

Query: 50  RNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILK 109
           +++  A+   + L+A   E +D   + +C S+LE +   +   DKA+++D   ++A+  K
Sbjct: 452 KDYVSALEYAEKLVASRGEAKDWSVKGYCLSRLERYYEAVECLDKAIKIDSNYVRAWAHK 511

Query: 110 GCAFSALGRKEEALSVWEKGYE 131
           G    +L R +EAL+  ++  E
Sbjct: 512 GNVLDSLKRYDEALAFLDRAIE 533


>gi|124024557|ref|YP_001018864.1| hypothetical protein P9303_28691 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964843|gb|ABM79599.1| Hypothetical protein P9303_28691 [Prochlorococcus marinus str. MIT
           9303]
          Length = 306

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 118/237 (49%), Gaps = 2/237 (0%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T+++ ++S +V F   RG A+ N+G Y  A++ F++ ++ +P    A   R   +    +
Sbjct: 38  TQVADAQSAAV-FN-KRGYAKFNKGDYQGALAEFNKAIEINPQDAGAYTSRSGTKLNLGD 95

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + A++D  +AI  NP    A+  RG A+  LG+   AI D +KA+E  P  AD    RG
Sbjct: 96  NQGALNDANKAIDINPQNSIAYYNRGSAKDELGDYQGAIADFNKAIEINPQDADAYLNRG 155

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
              +  KD   A+ D    ++++ +   AYT  G A  +  +YK A     KAI+++ + 
Sbjct: 156 NAKYDLKDTQGAIADWGKAIEINPQYAGAYTNRGAAKLNSKDYKGAISDFNKAIEINPHL 215

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
             A+ +     + L + + A+   ++ + I+ +++ AY   G+    +G  K A  D
Sbjct: 216 AAAYFNRGLAKRKLGDYQGAIPDYKKAIEINPQYAAAYRNSGIAKELVGDLKGACAD 272



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 92/197 (46%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           + +RG A+   G+   A+ + +KA+E  P  A     R        D   A+ D +  + 
Sbjct: 49  FNKRGYAKFNKGDYQGALAEFNKAIEINPQDAGAYTSRSGTKLNLGDNQGALNDANKAID 108

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           ++ +N  AY   G A   +G+Y+ A     KAI+++    +A+ +      DL +++ A+
Sbjct: 109 INPQNSIAYYNRGSAKDELGDYQGAIADFNKAIEINPQDADAYLNRGNAKYDLKDTQGAI 168

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               + + I+ +++ AY  RG        +K AI D +  + I+P      + R      
Sbjct: 169 ADWGKAIEINPQYAGAYTNRGAAKLNSKDYKGAISDFNKAIEINPHLAAAYFNRGLAKRK 228

Query: 632 IGEYREAIKDYDAALDL 648
           +G+Y+ AI DY  A+++
Sbjct: 229 LGDYQGAIPDYKKAIEI 245



 Score = 43.1 bits (100), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 48/97 (49%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           + AL    + + I+ + + AY  R      LG ++ A+ D +  + I+P N    Y R S
Sbjct: 63  QGALAEFNKAIEINPQDAGAYTSRSGTKLNLGDNQGALNDANKAIDINPQNSIAYYNRGS 122

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
               +G+Y+ AI D++ A+++     + ++ +  A Y
Sbjct: 123 AKDELGDYQGAIADFNKAIEINPQDADAYLNRGNAKY 159


>gi|403376993|gb|EJY88489.1| TPR repeat-containing protein [Oxytricha trifallax]
          Length = 715

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 150/317 (47%), Gaps = 30/317 (9%)

Query: 350 FKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILK 409
           F   ++   +N+  ++ K C + + +         ++RG+   + G +  A++ F+Q +K
Sbjct: 381 FHLGLMYHRTNQFHKSLK-CFSNVLQKLPEDKTVFIARGLVYQDMGNHQFAVNDFNQAIK 439

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAI-----QSNPSAGEAWKRRGQARAALGE 464
            DP + EA   RG ++   R    AI DF  ++     Q NP     +  +G    AL +
Sbjct: 440 LDPNFSEAFYRRGVSKLKSRRYHEAIEDFKMSLDLDTNQENPGV---YDGQGCCYHALRD 496

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
             +AI   + A+E +P++   L  R    +  + F  +++DL + +K+++ +      LG
Sbjct: 497 YDQAISFFNTAIEKDPHNISFLMNRAQCYYDLQMFTQSIDDLESALKVNENDPQVLYKLG 556

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLE-----------AWGHLTQFYQDLANSEKALEC 573
           L+  +  +YKK  +   KA+ +++ FL            A+ HL +F + +    + +E 
Sbjct: 557 LSFYAFNKYKKCIKTLKKAL-INKPFLTYEADIYYHIGLAYCHLEKFEKSIYPYSRCIEM 615

Query: 574 L-QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
           +   + YI +R +KAY +       +  H+KA++D S  +  +P N    + RA    ++
Sbjct: 616 IPSDIRYIHER-AKAYQM-------IEDHEKAVEDFSLVIKKNPKNAHAHFRRAFSLKSL 667

Query: 633 GEYREAIKDYDAALDLE 649
             Y EA  D++ A +L+
Sbjct: 668 KRYPEAADDFEKAKELD 684



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 127/301 (42%), Gaps = 31/301 (10%)

Query: 361 EAKRNKKFCVTRISK-SKSI-----SVDFRLSRGIAQVNEGKYASAISIFDQILKE---- 410
           +A+ NK  C+ R+ +  +SI     +V+ R  +  A  N G        FD+ L E    
Sbjct: 194 QARFNKGICLRRLGRLEQSIDDLKKAVEMRADKASAHNNLGLSYFEKEDFDEALNEFSKA 253

Query: 411 DPMYPEALI--GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
             + P +     RG A     +LE A  D+ EAI  NP     +  RG      G+   A
Sbjct: 254 ISIEPHSFHYNNRGLAHYHIGKLEDAKKDYDEAIARNPEDPFFYFNRGNVFLNQGDYDNA 313

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
            QD  +A++  PN+    H +G+ +        + ED        K   S YT L L   
Sbjct: 314 HQDYDRAIQIAPNNPKFWHSKGLAHE-----GKSQEDSK------KGASSDYT-LSLQEK 361

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           SI  YK+A       + L  NF+ +  HL   Y       K+L+C   VL         +
Sbjct: 362 SIEMYKQA-------LALSENFISSRFHLGLMYHRTNQFHKSLKCFSNVLQKLPEDKTVF 414

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             RGL+   +G H+ A+ D +  + +DP+  E  Y R         Y EAI+D+  +LDL
Sbjct: 415 IARGLVYQDMGNHQFAVNDFNQAIKLDPNFSEAFYRRGVSKLKSRRYHEAIEDFKMSLDL 474

Query: 649 E 649
           +
Sbjct: 475 D 475



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 145/337 (43%), Gaps = 26/337 (7%)

Query: 376 SKSISVD---FRLS-RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           SK+IS++   F  + RG+A  + GK   A   +D+ +  +P  P     RG     Q + 
Sbjct: 251 SKAISIEPHSFHYNNRGLAHYHIGKLEDAKKDYDEAIARNPEDPFFYFNRGNVFLNQGDY 310

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAA---------------LGESVEAIQDLSKAL 476
           + A  D+  AIQ  P+  + W  +G A                  L    ++I+   +AL
Sbjct: 311 DNAHQDYDRAIQIAPNNPKFWHSKGLAHEGKSQEDSKKGASSDYTLSLQEKSIEMYKQAL 370

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
               N        G++  +   F+ +++  S  ++   E+K+ +   GL    +G ++ A
Sbjct: 371 ALSENFISSRFHLGLMYHRTNQFHKSLKCFSNVLQKLPEDKTVFIARGLVYQDMGNHQFA 430

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID--KRFSKAYHLRGLL 594
                +AI+LD NF EA+              +A+E  +  L +D  +     Y  +G  
Sbjct: 431 VNDFNQAIKLDPNFSEAFYRRGVSKLKSRRYHEAIEDFKMSLDLDTNQENPGVYDGQGCC 490

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS-- 652
            H L  + +AI   ++ +  DP NI  L  RA CY+ +  + ++I D ++AL +  +   
Sbjct: 491 YHALRDYDQAISFFNTAIEKDPHNISFLMNRAQCYYDLQMFTQSIDDLESALKVNENDPQ 550

Query: 653 -MEKFVLQCLAF--YQKEIALYTASKINSEFCWFDID 686
            + K  L   AF  Y+K I     + IN  F  ++ D
Sbjct: 551 VLYKLGLSFYAFNKYKKCIKTLKKALINKPFLTYEAD 587



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/348 (22%), Positives = 145/348 (41%), Gaps = 60/348 (17%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+   A+  ++  +K DP+       R   +A   +LE AI D+ +AI++       ++ 
Sbjct: 136 GQLDEALKHYEIAVKRDPLNGNYYYNRALVKAKLEKLEEAIEDYNKAIENLSDQNYIYQA 195

Query: 455 R---GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           R   G     LG   ++I DL KA+E   + A   +  G+  F+ +DF+ A+ + S  + 
Sbjct: 196 RFNKGICLRRLGRLEQSIDDLKKAVEMRADKASAHNNLGLSYFEKEDFDEALNEFSKAIS 255

Query: 512 LDK---------------------------------ENKSAYTYLGLALSSIGEYKKAEE 538
           ++                                  E+   Y   G    + G+Y  A +
Sbjct: 256 IEPHSFHYNNRGLAHYHIGKLEDAKKDYDEAIARNPEDPFFYFNRGNVFLNQGDYDNAHQ 315

Query: 539 AHLKAIQLDRNFLEAW-----GHLTQFYQD----------LANSEKALECLQQVLYIDKR 583
            + +AIQ+  N  + W      H  +  +D          L+  EK++E  +Q L + + 
Sbjct: 316 DYDRAIQIAPNNPKFWHSKGLAHEGKSQEDSKKGASSDYTLSLQEKSIEMYKQALALSEN 375

Query: 584 F-SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
           F S  +HL GL+ H   Q  K++K  S+ L   P +      R   Y  +G ++ A+ D+
Sbjct: 376 FISSRFHL-GLMYHRTNQFHKSLKCFSNVLQKLPEDKTVFIARGLVYQDMGNHQFAVNDF 434

Query: 643 DAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDID 690
           + A+ L+ +  E       AFY++ ++   + + +     F +  D+D
Sbjct: 435 NQAIKLDPNFSE-------AFYRRGVSKLKSRRYHEAIEDFKMSLDLD 475



 Score = 40.8 bits (94), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 5/118 (4%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           +   D     G+A  +  K+  +I  + + ++  P     +  R  A     + E A+ D
Sbjct: 583 TYEADIYYHIGLAYCHLEKFEKSIYPYSRCIEMIPSDIRYIHERAKAYQMIEDHEKAVED 642

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           F+  I+ NP    A  RR  +  +L    EA  D  KA E +P     L+ + +VN+K
Sbjct: 643 FSLVIKKNPKNAHAHFRRAFSLKSLKRYPEAADDFEKAKELDP-----LNPKMVVNYK 695


>gi|434387381|ref|YP_007097992.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
 gi|428018371|gb|AFY94465.1| tetratricopeptide repeat protein [Chamaesiphon minutus PCC 6605]
          Length = 586

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 137/290 (47%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           +K   V+  L+  I + N+G Y   ++  D+ +  DP        RG A+    + + A 
Sbjct: 256 AKPKPVEDYLANAILEENKGNYRGMLTEADRAIAIDPNNARLYYIRGVAKFQLDDKKGAA 315

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            D+T++I  NP   +A+  R  ARA LG    A++D ++A+  +P  A     R +  FK
Sbjct: 316 DDYTKSIALNPRYPQAYSNRAYARAELGNPNGALEDTNRAIALDPKFALAYVNRSLAKFK 375

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
           F DF   +ED +  + +D     AY+   LA S +G+ + A E   +A+ +D    EA+ 
Sbjct: 376 FGDFKGVIEDTTRAIAIDPAIAIAYSNRSLAKSELGDQRGAIEDANRALAIDAKLGEAYI 435

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           +       L ++  A+   ++   +    ++A+   G+    LG  + AI   +  + ++
Sbjct: 436 NRGLANLRLGDNRAAIPDFERGAALKPTLAQAHSNIGVAKLQLGDTQGAIASSNRAISLN 495

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           P+  E  ++R    + +G+++ AI+D +  + L     + +  + +A  Q
Sbjct: 496 PNLPEGYFVRGFAKYQLGDHKGAIEDANRTISLRPTFAQAYANRAIARLQ 545



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 62/151 (41%), Gaps = 7/151 (4%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI D   A+  +   GEA+  RG A   LG++  AI D  +    +P  A      G+ 
Sbjct: 415 GAIEDANRALAIDAKLGEAYINRGLANLRLGDNRAAIPDFERGAALKPTLAQAHSNIGVA 474

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             +  D   A+   +  + L+      Y   G A   +G++K A E   + I L   F +
Sbjct: 475 KLQLGDTQGAIASSNRAISLNPNLPEGYFVRGFAKYQLGDHKGAIEDANRTISLRPTFAQ 534

Query: 553 AWGH-------LTQFYQDLANSEKALECLQQ 576
           A+ +       L    Q LA+  K+ E  +Q
Sbjct: 535 AYANRAIARLQLGDNKQGLADLRKSAELFKQ 565



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 5/145 (3%)

Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           ++++++D +L     +RG+A +  G   +AI  F++     P   +A    G A+    +
Sbjct: 421 NRALAIDAKLGEAYINRGLANLRLGDNRAAIPDFERGAALKPTLAQAHSNIGVAKLQLGD 480

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+    AI  NP+  E +  RG A+  LG+   AI+D ++ +   P  A     R 
Sbjct: 481 TQGAIASSNRAISLNPNLPEGYFVRGFAKYQLGDHKGAIEDANRTISLRPTFAQAYANRA 540

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKE 515
           I   +  D    + DL    +L K+
Sbjct: 541 IARLQLGDNKQGLADLRKSAELFKQ 565


>gi|428223874|ref|YP_007107971.1| hypothetical protein GEI7407_0418 [Geitlerinema sp. PCC 7407]
 gi|427983775|gb|AFY64919.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
           PCC 7407]
          Length = 267

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 2/195 (1%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P     RG   A + + EAAI+D++EAI+  P   EA+  RG A A LG    A QD S+
Sbjct: 45  PGEFFVRGMYLAQEGKTEAAIADWSEAIRLAPEFTEAYYNRGLAYAQLGRYDRAEQDFSR 104

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           AL   P   D    RG+V     D   A+ D +  ++LD ++ S+Y   G     +  Y+
Sbjct: 105 ALLLNPRLGDAYDNRGVVRAARGDAPGAIADFTTALRLDPQDASSYYNRGNVYDEMERYQ 164

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           +A   + +AI+L   +  A+    +    L N   A+E   Q + ID   + AY+ RG +
Sbjct: 165 RAIADYDEAIRLSPAYTSAYNSRGRVRLALENFAGAIEDFSQAIEIDPENAIAYYSRG-V 223

Query: 595 LHGLGQHK-KAIKDL 608
           +HGL +++  AI DL
Sbjct: 224 VHGLMENRPSAIADL 238



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/161 (31%), Positives = 80/161 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+    EGK  +AI+ + + ++  P + EA   RG A A     + A  DF+ A+  NP
Sbjct: 51  RGMYLAQEGKTEAAIADWSEAIRLAPEFTEAYYNRGLAYAQLGRYDRAEQDFSRALLLNP 110

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
             G+A+  RG  RAA G++  AI D + AL  +P  A   + RG V  + + +  A+ D 
Sbjct: 111 RLGDAYDNRGVVRAARGDAPGAIADFTTALRLDPQDASSYYNRGNVYDEMERYQRAIADY 170

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
              ++L     SAY   G    ++  +  A E   +AI++D
Sbjct: 171 DEAIRLSPAYTSAYNSRGRVRLALENFAGAIEDFSQAIEID 211



 Score = 76.3 bits (186), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 11/192 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A    G+Y  A   F + L  +P   +A   RG  RA + +   AI+DFT A++ +
Sbjct: 84  NRGLAYAQLGRYDRAEQDFSRALLLNPRLGDAYDNRGVVRAARGDAPGAIADFTTALRLD 143

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    ++  RG     +     AI D  +A+   P      + RG V    ++F  A+ED
Sbjct: 144 PQDASSYYNRGNVYDEMERYQRAIADYDEAIRLSPAYTSAYNSRGRVRLALENFAGAIED 203

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  +++D EN  AY   G+ +  + E + +  A           LE    L Q  Q   
Sbjct: 204 FSQAIEIDPENAIAYYSRGV-VHGLMENRPSAIAD----------LEKAADLFQRQQQPE 252

Query: 566 NSEKALECLQQV 577
           N ++AL+ LQ++
Sbjct: 253 NYQRALDKLQEL 264



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 34/148 (22%)

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           AA+ D S  ++L  E   AY   GLA + +G Y +AE                       
Sbjct: 63  AAIADWSEAIRLAPEFTEAYYNRGLAYAQLGRYDRAE----------------------- 99

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            QD +          + L ++ R   AY  RG++    G    AI D ++ L +DP +  
Sbjct: 100 -QDFS----------RALLLNPRLGDAYDNRGVVRAARGDAPGAIADFTTALRLDPQDAS 148

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
             Y R + Y  +  Y+ AI DYD A+ L
Sbjct: 149 SYYNRGNVYDEMERYQRAIADYDEAIRL 176


>gi|299140627|ref|ZP_07033765.1| TPR domain-containing protein [Prevotella oris C735]
 gi|298577593|gb|EFI49461.1| TPR domain-containing protein [Prevotella oris C735]
          Length = 657

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 6/259 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA+   G Y  A   F+Q +K +P   E    R   R   R    AI D+  AI  +P
Sbjct: 65  RGIAKQRLGDYTGAEEDFNQAVKLNPYVHELFRERANNRIVLRSYVDAIRDYDRAIALDP 124

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALE---FEPNSADILHERGIVNFKFKDFNAAV 503
              E W  R  +R    E  +   DL   L+     PN+  ++ E  +      D   A 
Sbjct: 125 DNKEYWFNRALSRYYQHEVQQTRHDLQYILKRWPALPNTYALMTETYL---NANDTLQAR 181

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           +     V+++  + ++++ LG        ++KA++A  KAI    N +  + +      +
Sbjct: 182 QWAEKTVRVNPYDGNSWSILGRLYLRQSNWRKADQAFGKAIHYTPNVVNNYTYRAMCRVN 241

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L    +A+E   + + +D     A++ RGLL   +G    AIKD S  L ++P+N++ LY
Sbjct: 242 LNKLRQAMEDFNKAIEMDPNSFLAHYNRGLLGLTVGDDNNAIKDFSYVLRLEPNNLQALY 301

Query: 624 LRASCYHAIGEYREAIKDY 642
            RA     +G+YR AI DY
Sbjct: 302 NRALLLDRVGDYRGAISDY 320



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 2/154 (1%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           +++GR   R  Q     A   F +AI   P+    +  R   R  L +  +A++D +KA+
Sbjct: 199 SILGRLYLR--QSNWRKADQAFGKAIHYTPNVVNNYTYRAMCRVNLNKLRQAMEDFNKAI 256

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           E +PNS    + RG++     D N A++D S  ++L+  N  A     L L  +G+Y+ A
Sbjct: 257 EMDPNSFLAHYNRGLLGLTVGDDNNAIKDFSYVLRLEPNNLQALYNRALLLDRVGDYRGA 316

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
              + + I    NF        + Y+ L  + KA
Sbjct: 317 ISDYSRVISKFPNFWSGLLSRAKCYRHLGLTAKA 350



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 114/296 (38%), Gaps = 45/296 (15%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           R+    I      I + P    AW  RG A+  LG+   A +D ++A++  P   ++  E
Sbjct: 39  RDYVVVIQHCNNIISNRPYLYRAWFYRGIAKQRLGDYTGAEEDFNQAVKLNPYVHELFRE 98

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           R       + +  A+ D    + LD +NK    +   ALS   +++  +  H     L R
Sbjct: 99  RANNRIVLRSYVDAIRDYDRAIALDPDNKE--YWFNRALSRYYQHEVQQTRHDLQYILKR 156

Query: 549 -------------NFLEA-----------------------WGHLTQFYQDLANSEKALE 572
                         +L A                       W  L + Y   +N  KA +
Sbjct: 157 WPALPNTYALMTETYLNANDTLQARQWAEKTVRVNPYDGNSWSILGRLYLRQSNWRKADQ 216

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + ++        Y  R +    L + ++A++D +  + +DP++    Y R      +
Sbjct: 217 AFGKAIHYTPNVVNNYTYRAMCRVNLNKLRQAMEDFNKAIEMDPNSFLAHYNRGLLGLTV 276

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYTASKINSEFCWF 683
           G+   AIKD+   L LE ++++    + L       Y+  I+ Y  S++ S+F  F
Sbjct: 277 GDDNNAIKDFSYVLRLEPNNLQALYNRALLLDRVGDYRGAISDY--SRVISKFPNF 330



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 19/147 (12%)

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY---------- 533
           D+L +R +      ++ AA+ DL+AC++ D     AY      L +  E+          
Sbjct: 500 DLLLQRAVAYTTTYNYEAALNDLNACIEQDSTLTLAYWQRAACLLASKEHATPAKTNGLF 559

Query: 534 -KKAEEAHLKAIQLDRN---FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
            KK  +   +AI LD      L   G++     D  N   A+ C    L  + R ++AY+
Sbjct: 560 IKKVADDLKRAIALDAGNPYLLYDLGNVYVLQNDYTN---AITCYGSALKYNSRIAEAYY 616

Query: 590 LRGLLLHGLGQHKKAIKDLSSG--LGI 614
            RG+    L Q   A+KDL +   LG+
Sbjct: 617 NRGIAKMALQQQSDALKDLGTAGELGL 643


>gi|359464391|ref|ZP_09252954.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris sp. CCMEE 5410]
          Length = 654

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 134/291 (46%), Gaps = 19/291 (6%)

Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
           N    V+ +S+S+++     L  G  +     Y  AI+ +D+ +  D    +A   RG A
Sbjct: 347 NNTVSVSPMSQSEAL-----LRSGYEKYRAKDYEGAIADYDESIDLDDQNADAFNERGLA 401

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           +   +  +AA+SD+ +A+  +     A+  RG  + AL +   A++D ++A+   P  A 
Sbjct: 402 KYGLQNYQAALSDYDQALTLDDRHANAYGNRGLTKHALRDYQGAVEDYNQAIRLNPQYAY 461

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
           + H RG+  +  KD   A+ D    +++D + +      G     +G+++ A   + +AI
Sbjct: 462 VYHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGKFRAALADYDQAI 521

Query: 545 QLDRNFLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           +LD     A+       G L  +  +LA+ +KALE       +D +   +Y+ RGL  + 
Sbjct: 522 RLDGKHANAYNGRAHAKGKLGDWKGELADFDKALE-------LDDQLIDSYNGRGLAQYN 574

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              +++AI+D +  L I+P      + R        +   A  D+  A DL
Sbjct: 575 RKNYREAIQDYNRALRIEPDYAVAYFNRGFVKEVQNDVEGAKADFQKAADL 625



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 111/236 (47%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           EAL+  G  +   ++ E AI+D+ E+I  +    +A+  RG A+  L     A+ D  +A
Sbjct: 359 EALLRSGYEKYRAKDYEGAIADYDESIDLDDQNADAFNERGLAKYGLQNYQAALSDYDQA 418

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L  +   A+    RG+     +D+  AVED +  ++L+ +    Y   G++  ++ + + 
Sbjct: 419 LTLDDRHANAYGNRGLTKHALRDYQGAVEDYNQAIRLNPQYAYVYHNRGVSKYNLKDLQG 478

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A   + +A+++D    +   +  + + DL     AL    Q + +D + + AY+ R    
Sbjct: 479 ALSDYDQALRIDPKREDTLRNRGRIHYDLGKFRAALADYDQAIRLDGKHANAYNGRAHAK 538

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
             LG  K  + D    L +D   I+    R    +    YREAI+DY+ AL +E D
Sbjct: 539 GKLGDWKGELADFDKALELDDQLIDSYNGRGLAQYNRKNYREAIQDYNRALRIEPD 594



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 113/234 (48%), Gaps = 7/234 (2%)

Query: 441 AIQSNP-------SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AIQ+N        S  EA  R G  +    +   AI D  ++++ +  +AD  +ERG+  
Sbjct: 343 AIQANNTVSVSPMSQSEALLRSGYEKYRAKDYEGAIADYDESIDLDDQNADAFNERGLAK 402

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           +  +++ AA+ D    + LD  + +AY   GL   ++ +Y+ A E + +AI+L+  +   
Sbjct: 403 YGLQNYQAALSDYDQALTLDDRHANAYGNRGLTKHALRDYQGAVEDYNQAIRLNPQYAYV 462

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           + +      +L + + AL    Q L ID +       RG + + LG+ + A+ D    + 
Sbjct: 463 YHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGKFRAALADYDQAIR 522

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           +D  +      RA     +G+++  + D+D AL+L+   ++ +  + LA Y ++
Sbjct: 523 LDGKHANAYNGRAHAKGKLGDWKGELADFDKALELDDQLIDSYNGRGLAQYNRK 576


>gi|254384605|ref|ZP_04999944.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194343489|gb|EDX24455.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 1033

 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 5/291 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG    N   Y  A++ ++  L  DP    A  GRG  R     L+ AI+D+T A++  P
Sbjct: 519 RGRNHRNADAYPQALADYEHALALDPENERAHFGRGRTRHLTGRLDEAIADYTRAVELAP 578

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                   RG A        EAI D  ++LE   +    L  RG        +  A+ D 
Sbjct: 579 EDLTNVSYRGLALQVAERYEEAIADFDRSLELRSDYEWALTSRGATFRLMGRYEEALADF 638

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  V LD  +  A+   G A +S+G Y++A     +AI+L  ++          Y+ L  
Sbjct: 639 NRAVDLDPGSAWAHASRGAAFNSMGRYEEALADFHRAIELKPDYDWPLAGRGDVYRSLGR 698

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+A+    + + +   +  A    G     LG+H++A+   +  + + P +      R 
Sbjct: 699 HEEAVAEFTRAIALTPDYWWALAGCGYSYTSLGRHEEAVAVFTRAIALAPDDRWAFAGRG 758

Query: 627 SCYHAIGEYREAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIALYT 672
             Y  +G   E++ D+D A+D+EL      +    V +CL  Y +  A +T
Sbjct: 759 DAYRRLGRPEESLADFDRAIDIELTYSWVLARRGDVYRCLDRYGEAEADFT 809



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 123/266 (46%), Gaps = 2/266 (0%)

Query: 387 RGIA-QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           RG+A QV E +Y  AI+ FD+ L+    Y  AL  RG         E A++DF  A+  +
Sbjct: 587 RGLALQVAE-RYEEAIADFDRSLELRSDYEWALTSRGATFRLMGRYEEALADFNRAVDLD 645

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P +  A   RG A  ++G   EA+ D  +A+E +P+    L  RG V         AV +
Sbjct: 646 PGSAWAHASRGAAFNSMGRYEEALADFHRAIELKPDYDWPLAGRGDVYRSLGRHEEAVAE 705

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + L  +   A    G + +S+G +++A     +AI L  +   A+      Y+ L 
Sbjct: 706 FTRAIALTPDYWWALAGCGYSYTSLGRHEEAVAVFTRAIALAPDDRWAFAGRGDAYRRLG 765

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E++L    + + I+  +S     RG +   L ++ +A  D +  + +DP +   L  R
Sbjct: 766 RPEESLADFDRAIDIELTYSWVLARRGDVYRCLDRYGEAEADFTRAIALDPDDGWALTHR 825

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
                 +    EA+ DYDAA+ L+ D
Sbjct: 826 GMTRAMLDRQDEAVADYDAAIGLDPD 851



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 110/247 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RG    + G++  A++ F + +   P Y  AL G G +       E A++ FT AI   
Sbjct: 688 GRGDVYRSLGRHEEAVAEFTRAIALTPDYWWALAGCGYSYTSLGRHEEAVAVFTRAIALA 747

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A   LG   E++ D  +A++ E   + +L  RG V      +  A  D
Sbjct: 748 PDDRWAFAGRGDAYRRLGRPEESLADFDRAIDIELTYSWVLARRGDVYRCLDRYGEAEAD 807

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + LD ++  A T+ G+  + +    +A   +  AI LD +   A GH    ++   
Sbjct: 808 FTRAIALDPDDGWALTHRGMTRAMLDRQDEAVADYDAAIGLDPDDGWALGHRGMSHRMSG 867

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+AL  L + + I    S     RGLL   LG H  A+ DL+  L ++P N    Y  
Sbjct: 868 RYEQALADLDRAVEITPDDSWPLTSRGLLHRLLGHHDAALADLTRALTLEPDNAWSHYES 927

Query: 626 ASCYHAI 632
           A   HA+
Sbjct: 928 AVVLHAL 934



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 110/266 (41%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG      G+Y  A++ F++ +  DP    A   RG A       E A++DF  AI+  
Sbjct: 620 SRGATFRLMGRYEEALADFNRAVDLDPGSAWAHASRGAAFNSMGRYEEALADFHRAIELK 679

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P        RG    +LG   EA+ + ++A+   P+    L   G           AV  
Sbjct: 680 PDYDWPLAGRGDVYRSLGRHEEAVAEFTRAIALTPDYWWALAGCGYSYTSLGRHEEAVAV 739

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + L  +++ A+   G A   +G  +++     +AI ++  +          Y+ L 
Sbjct: 740 FTRAIALAPDDRWAFAGRGDAYRRLGRPEESLADFDRAIDIELTYSWVLARRGDVYRCLD 799

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +A     + + +D     A   RG+    L +  +A+ D  + +G+DP +   L  R
Sbjct: 800 RYGEAEADFTRAIALDPDDGWALTHRGMTRAMLDRQDEAVADYDAAIGLDPDDGWALGHR 859

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
              +   G Y +A+ D D A+++  D
Sbjct: 860 GMSHRMSGRYEQALADLDRAVEITPD 885


>gi|427719642|ref|YP_007067636.1| hypothetical protein Cal7507_4431 [Calothrix sp. PCC 7507]
 gi|427352078|gb|AFY34802.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 224

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/159 (28%), Positives = 92/159 (57%), Gaps = 2/159 (1%)

Query: 380 SVDFR--LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           + DF+   ++G+ ++ +G +  AI+ F+ +++ +P + E    RG A++  R+ +AAI+D
Sbjct: 34  AADFQGYYNQGVQKLEQGNFNGAIADFNSVVQLNPQFYEGFCLRGLAKSQLRDFKAAIAD 93

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +A++ NP+  +A+  RG A A LG   +AI D  + ++ +P S D  +  G  N++  
Sbjct: 94  YNQALRLNPNHADAYNSRGTAYAELGSLPDAIADFHQTIKIDPTSVDAYYNLGSANYRQG 153

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           +   A+ + ++ +K++     AY   GLA  ++GE + A
Sbjct: 154 NHKQAIANFNSALKINPNLADAYGNRGLAQYALGEKRTA 192



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 6/184 (3%)

Query: 399 SAISIFDQILKEDPMYP------EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           SA+S    +   +P  P      +    +G  +  Q     AI+DF   +Q NP   E +
Sbjct: 15  SALSGMPTVFAREPQIPLKAADFQGYYNQGVQKLEQGNFNGAIADFNSVVQLNPQFYEGF 74

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             RG A++ L +   AI D ++AL   PN AD  + RG    +      A+ D    +K+
Sbjct: 75  CLRGLAKSQLRDFKAAIADYNQALRLNPNHADAYNSRGTAYAELGSLPDAIADFHQTIKI 134

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           D  +  AY  LG A    G +K+A      A++++ N  +A+G+       L     A+ 
Sbjct: 135 DPTSVDAYYNLGSANYRQGNHKQAIANFNSALKINPNLADAYGNRGLAQYALGEKRTAIA 194

Query: 573 CLQQ 576
            LQQ
Sbjct: 195 DLQQ 198



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/136 (30%), Positives = 69/136 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+     + +AI+ ++Q L+ +P + +A   RGTA A    L  AI+DF + I+ +P
Sbjct: 77  RGLAKSQLRDFKAAIADYNQALRLNPNHADAYNSRGTAYAELGSLPDAIADFHQTIKIDP 136

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           ++ +A+   G A    G   +AI + + AL+  PN AD    RG+  +   +   A+ DL
Sbjct: 137 TSVDAYYNLGSANYRQGNHKQAIANFNSALKINPNLADAYGNRGLAQYALGEKRTAIADL 196

Query: 507 SACVKLDKENKSAYTY 522
               KL  E      Y
Sbjct: 197 QQAAKLFSEQGDTQRY 212



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/162 (27%), Positives = 81/162 (50%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + +G+   +  +FN A+ D ++ V+L+ +    +   GLA S + ++K A   + +A++L
Sbjct: 41  YNQGVQKLEQGNFNGAIADFNSVVQLNPQFYEGFCLRGLAKSQLRDFKAAIADYNQALRL 100

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           + N  +A+      Y +L +   A+    Q + ID     AY+  G   +  G HK+AI 
Sbjct: 101 NPNHADAYNSRGTAYAELGSLPDAIADFHQTIKIDPTSVDAYYNLGSANYRQGNHKQAIA 160

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + +S L I+P+  +    R    +A+GE R AI D   A  L
Sbjct: 161 NFNSALKINPNLADAYGNRGLAQYALGEKRTAIADLQQAAKL 202



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 11/192 (5%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           AL G  T  A + ++    +DF           + +  +G  +   G    AI D +  +
Sbjct: 16  ALSGMPTVFAREPQIPLKAADF-----------QGYYNQGVQKLEQGNFNGAIADFNSVV 64

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           +  P   +    RG+   + +DF AA+ D +  ++L+  +  AY   G A + +G    A
Sbjct: 65  QLNPQFYEGFCLRGLAKSQLRDFKAAIADYNQALRLNPNHADAYNSRGTAYAELGSLPDA 124

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
                + I++D   ++A+ +L        N ++A+      L I+   + AY  RGL  +
Sbjct: 125 IADFHQTIKIDPTSVDAYYNLGSANYRQGNHKQAIANFNSALKINPNLADAYGNRGLAQY 184

Query: 597 GLGQHKKAIKDL 608
            LG+ + AI DL
Sbjct: 185 ALGEKRTAIADL 196



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/99 (36%), Positives = 51/99 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG A    G    AI+ F Q +K DP   +A    G+A   Q   + AI++F  A++ N
Sbjct: 110 SRGTAYAELGSLPDAIADFHQTIKIDPTSVDAYYNLGSANYRQGNHKQAIANFNSALKIN 169

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           P+  +A+  RG A+ ALGE   AI DL +A +      D
Sbjct: 170 PNLADAYGNRGLAQYALGEKRTAIADLQQAAKLFSEQGD 208


>gi|281423115|ref|ZP_06254028.1| exported Tpr repeat-family protein [Prevotella oris F0302]
 gi|281402451|gb|EFB33282.1| exported Tpr repeat-family protein [Prevotella oris F0302]
          Length = 657

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 6/259 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA+   G Y  A   F+Q +K +P   E    R   R   R    AI D+  AI  +P
Sbjct: 65  RGIAKQRLGDYTGAEEDFNQAVKLNPYVHELFRERANNRIVLRSYVDAIHDYDRAIALDP 124

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALE---FEPNSADILHERGIVNFKFKDFNAAV 503
              E W  R  +R    E  +   DL   L+     PN+  ++ E  +      D   A 
Sbjct: 125 DNKEYWFNRALSRYYQHEVQQTRHDLQYILKRWPALPNTYALMTETYL---NANDTLQAR 181

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           +     V+++  + ++++ LG        ++KA++A  KAI    N +  + +      +
Sbjct: 182 QWAEKTVRVNPYDGNSWSILGRLYLRQSNWRKADQAFGKAIHYTPNVVNNYTYRAMCRVN 241

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L    +A+E   + + +D     A++ RGLL   +G    AIKD S  L ++P+N++ LY
Sbjct: 242 LNKLRQAMEDFNKAIEMDPNSFLAHYNRGLLGLTVGDDNNAIKDFSYVLRLEPNNLQALY 301

Query: 624 LRASCYHAIGEYREAIKDY 642
            RA     +G+YR AI DY
Sbjct: 302 NRALLLDRVGDYRGAISDY 320



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 2/154 (1%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           +++GR   R  Q     A   F +AI   P+    +  R   R  L +  +A++D +KA+
Sbjct: 199 SILGRLYLR--QSNWRKADQAFGKAIHYTPNVVNNYTYRAMCRVNLNKLRQAMEDFNKAI 256

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           E +PNS    + RG++     D N A++D S  ++L+  N  A     L L  +G+Y+ A
Sbjct: 257 EMDPNSFLAHYNRGLLGLTVGDDNNAIKDFSYVLRLEPNNLQALYNRALLLDRVGDYRGA 316

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
              + + I    NF        + Y+ L  + KA
Sbjct: 317 ISDYSRVISKFPNFWSGLLSRAKCYRHLGLTAKA 350



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/296 (20%), Positives = 114/296 (38%), Gaps = 45/296 (15%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           R+    I      I + P    AW  RG A+  LG+   A +D ++A++  P   ++  E
Sbjct: 39  RDYVVVIQHCNNIISNRPYLYRAWFYRGIAKQRLGDYTGAEEDFNQAVKLNPYVHELFRE 98

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           R       + +  A+ D    + LD +NK    +   ALS   +++  +  H     L R
Sbjct: 99  RANNRIVLRSYVDAIHDYDRAIALDPDNKE--YWFNRALSRYYQHEVQQTRHDLQYILKR 156

Query: 549 -------------NFLEA-----------------------WGHLTQFYQDLANSEKALE 572
                         +L A                       W  L + Y   +N  KA +
Sbjct: 157 WPALPNTYALMTETYLNANDTLQARQWAEKTVRVNPYDGNSWSILGRLYLRQSNWRKADQ 216

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + ++        Y  R +    L + ++A++D +  + +DP++    Y R      +
Sbjct: 217 AFGKAIHYTPNVVNNYTYRAMCRVNLNKLRQAMEDFNKAIEMDPNSFLAHYNRGLLGLTV 276

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYTASKINSEFCWF 683
           G+   AIKD+   L LE ++++    + L       Y+  I+ Y  S++ S+F  F
Sbjct: 277 GDDNNAIKDFSYVLRLEPNNLQALYNRALLLDRVGDYRGAISDY--SRVISKFPNF 330



 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 13/144 (9%)

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY---------- 533
           D+L +R +      ++ AA+ DL+AC++ D     AY      L +  E+          
Sbjct: 500 DLLLQRAVAYTTTYNYEAALNDLNACIEQDSTLALAYWQRATCLLASKEHATPAKTNGLF 559

Query: 534 -KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
            KK  +   +AI LD         L   Y   ++   A+ C    L  + R ++AY+ RG
Sbjct: 560 IKKVADDLKRAIALDTGNPYLIYDLGNVYALQSDYTNAIICYGSALKYNSRIAEAYYNRG 619

Query: 593 LLLHGLGQHKKAIKDLSSG--LGI 614
           +    L Q   A+KDL +   LG+
Sbjct: 620 IAKMALQQQSDALKDLGTAGELGL 643


>gi|428304585|ref|YP_007141410.1| hypothetical protein Cri9333_0985 [Crinalium epipsammum PCC 9333]
 gi|428246120|gb|AFZ11900.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 287

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 54/191 (28%), Positives = 102/191 (53%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L  RG  +    + +AAI+ F +AI+ N    +A+  R  A + LG   EA++D ++A+ 
Sbjct: 67  LYNRGVDQLENGDYKAAIALFDQAIKINSKDADAFYNRAYAYSLLGSYSEAVKDYTQAIN 126

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
            +P+  D    R    +   ++ +A+ D +  ++++ +N  AY Y G A   +GE+  A 
Sbjct: 127 LKPDFGDAYSNRAYAYYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEHLAAI 186

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           E + +A+ +D    +A+ +    Y    N  KA+E   Q + +D +F++AY+ RG+    
Sbjct: 187 ENYNQALSIDPKNAKAYYNRALGYNRQNNHLKAIEDYTQSVRLDTKFAEAYYNRGVTSLQ 246

Query: 598 LGQHKKAIKDL 608
           LG+  +AI+D+
Sbjct: 247 LGKKAEAIEDI 257



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 2/217 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ Q+  G Y +AI++FDQ +K +    +A   R  A +       A+ D+T+AI   
Sbjct: 69  NRGVDQLENGDYKAAIALFDQAIKINSKDADAFYNRAYAYSLLGSYSEAVKDYTQAINLK 128

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P  G+A+  R  A    G    AI D ++A+   P +AD    +G       +  AA+E+
Sbjct: 129 PDFGDAYSNRAYAYYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEHLAAIEN 188

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + +D +N  AY    L  +    + KA E + ++++LD  F EA+ +       L 
Sbjct: 189 YNQALSIDPKNAKAYYNRALGYNRQNNHLKAIEDYTQSVRLDTKFAEAYYNRGVTSLQLG 248

Query: 566 NSEKALECLQQV--LYIDKRFSKAYHLRGLLLHGLGQ 600
              +A+E +++   LY+ ++ ++ Y     L+  L Q
Sbjct: 249 KKAEAIEDIRKAADLYLSQKKTQNYQSAIALVKQLQQ 285



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 48/175 (27%), Positives = 88/175 (50%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           SA  L+ RG+   +  D+ AA+      +K++ ++  A+     A S +G Y +A + + 
Sbjct: 63  SAVDLYNRGVDQLENGDYKAAIALFDQAIKINSKDADAFYNRAYAYSLLGSYSEAVKDYT 122

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +AI L  +F +A+ +    Y    N + A+    Q + I+ + + AY  +G     LG+H
Sbjct: 123 QAINLKPDFGDAYSNRAYAYYVAGNYQSAIADCTQAIRINPKNADAYIYKGNAYDDLGEH 182

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             AI++ +  L IDP N +  Y RA  Y+    + +AI+DY  ++ L+    E +
Sbjct: 183 LAAIENYNQALSIDPKNAKAYYNRALGYNRQNNHLKAIEDYTQSVRLDTKFAEAY 237



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 49/172 (28%), Positives = 83/172 (48%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K  S   D   +R  A    G Y+ A+  + Q +   P + +A   R  A       ++A
Sbjct: 92  KINSKDADAFYNRAYAYSLLGSYSEAVKDYTQAINLKPDFGDAYSNRAYAYYVAGNYQSA 151

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I+D T+AI+ NP   +A+  +G A   LGE + AI++ ++AL  +P +A   + R +   
Sbjct: 152 IADCTQAIRINPKNADAYIYKGNAYDDLGEHLAAIENYNQALSIDPKNAKAYYNRALGYN 211

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +  +   A+ED +  V+LD +   AY   G+    +G+  +A E   KA  L
Sbjct: 212 RQNNHLKAIEDYTQSVRLDTKFAEAYYNRGVTSLQLGKKAEAIEDIRKAADL 263


>gi|307150150|ref|YP_003885534.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 7822]
 gi|306980378|gb|ADN12259.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 7822]
          Length = 912

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 159/347 (45%), Gaps = 42/347 (12%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF-QRELEAA 434
           +K+ S+D+ L  G+  +   K   A+   D+ +   P +  A   +G A AF +++ E A
Sbjct: 514 AKANSLDW-LIYGLEVLRLNKPQEALKAIDKAISLKPDFDLAYYAKGLALAFTEQKFEQA 572

Query: 435 ISDFTEAIQSNPSAGEAWK----------RRGQARAALGESV------------------ 466
           +  F +A Q NP   +AW+          R  ++ AA+ +S+                  
Sbjct: 573 LVQFDKATQLNPQLEQAWRWKSISLANLDRHSESLAAIDQSIKLRPKDILLYQFRLFVLF 632

Query: 467 ------EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
                 EA++ +++ L  + N+ +    RG++ F+ KD+  +++DLS  ++++     AY
Sbjct: 633 NLENYSEALKTVTQMLALKENNPNGYFWRGLIYFQQKDYQNSLKDLSKAIEINPNYAEAY 692

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              G     + +Y+KA   + KAI++  +++EA+      Y  L   +KA     + L I
Sbjct: 693 GIRGGVYRELQDYQKAITDYNKAIEIQPDWVEAYNGRGSAYIVLQEPQKAFTDFSKSLEI 752

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
            +    AY   G+       ++K +  LS  L + P   E   +R   Y  + +Y++AI 
Sbjct: 753 KQNNPDAYLGLGIFYIAQKNYEKGMDYLSKTLELKPDYAEAYVIRGKIYVGLEQYQKAIT 812

Query: 641 DYDAALDLELDSMEKFVLQCLAF-----YQKEIA-LYTASKINSEFC 681
           DY  AL+++ ++ E +  +  A+     Y K I  L  A ++NS + 
Sbjct: 813 DYSKALEIQQNNAEAYAERGAAYIYLKDYPKAITDLSKAVELNSNYA 859



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 109/222 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+    +  Y +++    + ++ +P Y EA   RG      ++ + AI+D+ +AI+  P
Sbjct: 661 RGLIYFQQKDYQNSLKDLSKAIEINPNYAEAYGIRGGVYRELQDYQKAITDYNKAIEIQP 720

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              EA+  RG A   L E  +A  D SK+LE + N+ D     GI     K++   ++ L
Sbjct: 721 DWVEAYNGRGSAYIVLQEPQKAFTDFSKSLEIKQNNPDAYLGLGIFYIAQKNYEKGMDYL 780

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  ++L  +   AY   G     + +Y+KA   + KA+++ +N  EA+      Y  L +
Sbjct: 781 SKTLELKPDYAEAYVIRGKIYVGLEQYQKAITDYSKALEIQQNNAEAYAERGAAYIYLKD 840

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             KA+  L + + ++  ++ AY  RG +   L + +KA  DL
Sbjct: 841 YPKAITDLSKAVELNSNYADAYMARGAVYLVLQEAQKAQGDL 882



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 65/132 (49%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P+A +G G     Q+  E  +   ++ ++  P   EA+  RG+    L +  +AI D SK
Sbjct: 757 PDAYLGLGIFYIAQKNYEKGMDYLSKTLELKPDYAEAYVIRGKIYVGLEQYQKAITDYSK 816

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           ALE + N+A+   ERG      KD+  A+ DLS  V+L+     AY   G     + E +
Sbjct: 817 ALEIQQNNAEAYAERGAAYIYLKDYPKAITDLSKAVELNSNYADAYMARGAVYLVLQEAQ 876

Query: 535 KAEEAHLKAIQL 546
           KA+    KA QL
Sbjct: 877 KAQGDLQKAAQL 888



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 3/157 (1%)

Query: 369 CVTRISKSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
             T  SKS  I   + D  L  GI  + +  Y   +    + L+  P Y EA + RG   
Sbjct: 742 AFTDFSKSLEIKQNNPDAYLGLGIFYIAQKNYEKGMDYLSKTLELKPDYAEAYVIRGKIY 801

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
               + + AI+D+++A++   +  EA+  RG A   L +  +AI DLSKA+E   N AD 
Sbjct: 802 VGLEQYQKAITDYSKALEIQQNNAEAYAERGAAYIYLKDYPKAITDLSKAVELNSNYADA 861

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
              RG V    ++   A  DL    +L +E  +   Y
Sbjct: 862 YMARGAVYLVLQEAQKAQGDLQKAAQLYQEQGNTQMY 898



 Score = 40.0 bits (92), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 25/120 (20%), Positives = 63/120 (52%), Gaps = 3/120 (2%)

Query: 13  LNKTHKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLLA-QSYEIQD 71
           L++  +++  ID+ +++       +  +  L  L +L N+S+A++ +  +LA +      
Sbjct: 600 LDRHSESLAAIDQSIKLRP--KDILLYQFRLFVLFNLENYSEALKTVTQMLALKENNPNG 657

Query: 72  ICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYE 131
              R   Y Q + +++ ++D  KA++++P   +AY ++G  +  L   ++A++ + K  E
Sbjct: 658 YFWRGLIYFQQKDYQNSLKDLSKAIEINPNYAEAYGIRGGVYRELQDYQKAITDYNKAIE 717


>gi|359461418|ref|ZP_09249981.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 784

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 8/247 (3%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P+ALI R   RA   +L+ A+ DF EAI  NP+   A+  RG    +LG+   AI D S+
Sbjct: 30  PDALINRANKRATNGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAAIHDFSE 89

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A+E  P+  +   +RG    +  +F  A++D S  ++++     AY     + + +G++ 
Sbjct: 90  AIELLPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYCIKAYYKRADSRAELGDHP 149

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
            A     + I        A+     F       EKA+E     +  + R + AY  RG  
Sbjct: 150 GALTDFSQVILRLPKDANAYCQRGMFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYC 209

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA----ALDLEL 650
           L  +G+ +KA KD S  L  DP N +  Y RA   +A+G  +EA  D  +    A D  L
Sbjct: 210 LAQMGEAEKASKDFSEALLHDP-NHQAAYTRA---YALGMLKEAPVDVSSPSSTATDYPL 265

Query: 651 DSMEKFV 657
             +E+ V
Sbjct: 266 SLLEESV 272



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 122/282 (43%), Gaps = 16/282 (5%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  ++R   +   G    A+  FD+ +  +P    A   RG       + EAAI DF+EA
Sbjct: 31  DALINRANKRATNGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAAIHDFSEA 90

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+  P   EA+ +RG +    GE   AIQD S+A+   P      ++R     +  D   
Sbjct: 91  IELLPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYCIKAYYKRADSRAELGDHPG 150

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D S  +    ++ +AY   G+ LS  GE +KA E    AI+ +    +A+ H     
Sbjct: 151 ALTDFSQVILRLPKDANAYCQRGMFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYCL 210

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             +  +EKA +   + L  D     AY       + LG  K+A  D+SS     PS+   
Sbjct: 211 AQMGEAEKASKDFSEALLHDPNHQAAY----TRAYALGMLKEAPVDVSS-----PSSTAT 261

Query: 622 LYLRASCYHAIGEYREAIKDYD-------AALDLELDSMEKF 656
            Y  +    ++    E ++D D       A + LE  SME F
Sbjct: 262 DYPLSLLEESVPVSVEPVEDSDDEQEPHPATVPLEPTSMEGF 303



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 18/226 (7%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G +  A++ F Q++   P    A   RG   +   ELE AI DFT AI+ NP   +A+  
Sbjct: 146 GDHPGALTDFSQVILRLPKDANAYCQRGMFLSQSGELEKAIEDFTSAIEHNPRLADAYFH 205

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG   A +GE+ +A +D S+AL  +PN     + R       K+         A V +  
Sbjct: 206 RGYCLAQMGEAEKASKDFSEALLHDPNH-QAAYTRAYALGMLKE---------APVDVSS 255

Query: 515 ENKSAYTY--------LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            + +A  Y        + +++  + +    +E H   + L+   +E +           +
Sbjct: 256 PSSTATDYPLSLLEESVPVSVEPVEDSDDEQEPHPATVPLEPTSMEGFFERANNRIQRGD 315

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            + A+    +++  D   S+AY+ RG  L  LG+ + A++DL+  +
Sbjct: 316 LDGAISDYSKIIDNDPENSQAYYQRGQSLGALGESQAAMEDLNQAI 361



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 90/225 (40%), Gaps = 39/225 (17%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+     G+   AI  F   ++ +P   +A   RG   A   E E A  DF+EA+  +P
Sbjct: 172 RGMFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYCLAQMGEAEKASKDFSEALLHDP 231

Query: 447 SAGEAWKRRGQARAALGE--------------------------SVEAIQD-------LS 473
           +   A+ R   A   L E                          SVE ++D         
Sbjct: 232 NHQAAYTR-AYALGMLKEAPVDVSSPSSTATDYPLSLLEESVPVSVEPVEDSDDEQEPHP 290

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
             +  EP S +   ER     +  D + A+ D S  +  D EN  AY   G +L ++GE 
Sbjct: 291 ATVPLEPTSMEGFFERANNRIQRGDLDGAISDYSKIIDNDPENSQAYYQRGQSLGALGES 350

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
           + A E   +AI   R  + + G +  F  +L+ +   LE L+Q L
Sbjct: 351 QAAMEDLNQAIHWAR--VHSLGLIRDFSGELSTT---LETLKQDL 390



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 57/301 (18%)

Query: 412 PMYPEALIG---RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
           P+ P ++ G   R   R  + +L+ AISD+++ I ++P   +A+ +RGQ+  ALGES  A
Sbjct: 294 PLEPTSMEGFFERANNRIQRGDLDGAISDYSKIIDNDPENSQAYYQRGQSLGALGESQAA 353

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK-LDKENKSAYTYLGLAL 527
           ++DL++A+ +       +H  G++     + +  +E L   +K L  ++  A T+     
Sbjct: 354 MEDLNQAIHWA-----RVHSLGLIRDFSGELSTTLETLKQDLKELSYQSPFAKTHPLPPG 408

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK----------ALECLQQV 577
           ++  + + A+      I       +A G L     + +N+EK          A E +   
Sbjct: 409 TATDQLQSADPPANDVIDSSSEQPDASGKLKTV--EHSNAEKTNSSNTPPTSAKESVVTD 466

Query: 578 LYIDKRFSKAYHLRGL---------------------------LLHGLGQHKKAIKDLSS 610
           + ID  FS+      +                           L   + QH +AI+    
Sbjct: 467 IVIDPHFSELEPSSSVAQGEPPVPPPPASPQPSPPAPEITAPTLERAIAQHTRAIEQ--- 523

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV--LQCLAFYQKEI 668
               +P + E  + R       G+ + AI+DY   + L+ ++ E +V   +CL+    E 
Sbjct: 524 ----NPLDAEAFFNRGQSRALGGDLQGAIEDYSRTIRLDPNNREAYVKRARCLSALGDEA 579

Query: 669 A 669
           A
Sbjct: 580 A 580



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 47/81 (58%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI+   + ++++P+  EA   RG +RA   +L+ AI D++  I+ +P+  EA+ +R +  
Sbjct: 513 AIAQHTRAIEQNPLDAEAFFNRGQSRALGGDLQGAIEDYSRTIRLDPNNREAYVKRARCL 572

Query: 460 AALGESVEAIQDLSKALEFEP 480
           +ALG+   A  DL+  +   P
Sbjct: 573 SALGDEAAAQADLNHVIRQSP 593



 Score = 48.1 bits (113), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           LE AI+  T AI+ NP   EA+  RGQ+RA  G+   AI+D S+ +  +PN+ +   +R 
Sbjct: 510 LERAIAQHTRAIEQNPLDAEAFFNRGQSRALGGDLQGAIEDYSRTIRLDPNNREAYVKRA 569

Query: 491 IVNFKFKDFNAAVEDLSACVK 511
                  D  AA  DL+  ++
Sbjct: 570 RCLSALGDEAAAQADLNHVIR 590


>gi|159487987|ref|XP_001702004.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158281223|gb|EDP06979.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 261

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 35/253 (13%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           YA A+  F   +  +P   +    RG A   Q   E AI D+T A+Q +P    A+  R 
Sbjct: 2   YAGAVEDFSAAIALEPGNADFYHNRGFALRKQGLFERAIHDYTRAVQLHPGHCRAYYNRA 61

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                L    +AI D S+AL  EP +A  LH RG ++ +    +AA+ D +A +  D   
Sbjct: 62  FCHDRLDHVEQAIDDYSRALAMEPTNATALHNRGSLHERAGRPDAAIADFTAAIAADPCC 121

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
            ++Y   G A   +G++  A +   +AI LD               DL +  +   C ++
Sbjct: 122 AASYNARG-ARRELGDHHGAVQDLTRAIGLDPT-------------DLLSYSRRAHCFRR 167

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
                                +G+++ A+ D +  + + P+N +   +RA CY  IG Y 
Sbjct: 168 ---------------------MGEYESAVTDYTKAISLSPNNAKLHTIRAYCYAMIGWYG 206

Query: 637 EAIKDYDAALDLE 649
           EA+ DY+  L LE
Sbjct: 207 EAVADYNTVLALE 219



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 6/209 (2%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           A++D S A+  EP +AD  H RG    K   F  A+ D +  V+L   +  AY       
Sbjct: 5   AVEDFSAAIALEPGNADFYHNRGFALRKQGLFERAIHDYTRAVQLHPGHCRAYYNRAFCH 64

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             +   ++A + + +A+ ++     A  +    ++     + A+      +  D   + +
Sbjct: 65  DRLDHVEQAIDDYSRALAMEPTNATALHNRGSLHERAGRPDAAIADFTAAIAADPCCAAS 124

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y+ RG     LG H  A++DL+  +G+DP+++     RA C+  +GEY  A+ DY  A+ 
Sbjct: 125 YNARGARRE-LGDHHGAVQDLTRAIGLDPTDLLSYSRRAHCFRRMGEYESAVTDYTKAIS 183

Query: 648 L-----ELDSMEKFVLQCLAFYQKEIALY 671
           L     +L ++  +    + +Y + +A Y
Sbjct: 184 LSPNNAKLHTIRAYCYAMIGWYGEAVADY 212



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 35/254 (13%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           + DF  +RG A   +G +  AI  + + ++  P +  A   R         +E AI D++
Sbjct: 19  NADFYHNRGFALRKQGLFERAIHDYTRAVQLHPGHCRAYYNRAFCHDRLDHVEQAIDDYS 78

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            A+   P+   A   RG      G    AI D + A+  +P  A   + RG    +  D 
Sbjct: 79  RALAMEPTNATALHNRGSLHERAGRPDAAIADFTAAIAADPCCAASYNARG-ARRELGDH 137

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           + AV+DL+  + LD  +  +Y+        +GEY+ A   + KAI L  N          
Sbjct: 138 HGAVQDLTRAIGLDPTDLLSYSRRAHCFRRMGEYESAVTDYTKAISLSPN---------- 187

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
                                    +K + +R      +G + +A+ D ++ L ++P+N 
Sbjct: 188 ------------------------NAKLHTIRAYCYAMIGWYGEAVADYNTVLALEPTNS 223

Query: 620 ECLYLRASCYHAIG 633
              Y RA     +G
Sbjct: 224 HAAYNRAIALEKLG 237


>gi|384208242|ref|YP_005593962.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
 gi|343385892|gb|AEM21382.1| putative TPR domain-containing protein [Brachyspira intermedia
           PWS/A]
          Length = 817

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 138/279 (49%), Gaps = 12/279 (4%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A      Y ++I  +++ L+ +P Y  A I  G  +      + AI  + +A++ NP 
Sbjct: 456 GLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPD 515

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+     A  +L +   +++D +KALE   + A+I    G++  +   ++ A+E  +
Sbjct: 516 YSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQAIYDKAIEYYN 575

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD---- 563
             ++++    +AY  +   LS++ +Y++  E + K I++        G+   +Y+     
Sbjct: 576 KVLEINPNKVNAYYNIAFCLSNMDKYEETLEIYDKVIRM------YPGNFDVYYERGYTK 629

Query: 564 --LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
              +  E+A+     ++ ++ +   AY+ RG     L  + +AIKD    +  + +N + 
Sbjct: 630 YRASKYEEAIRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDEAIKDFDKAIEYNANNSDF 689

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
              RASCY  + +YRE+I++YD A++L+ D    ++L+ 
Sbjct: 690 YSERASCYDYLNKYRESIENYDKAIELKDDDWFLYILRA 728



 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 144/308 (46%), Gaps = 14/308 (4%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            R+ +  +  +D R++ G+  +    Y  AI+I+D+++ + P    +   RG  + +  +
Sbjct: 97  NRVLQINNNDIDSRVNVGLCYLYMKNYKEAINIYDEVIADFPDNINSYNNRGLCKFYLSQ 156

Query: 431 LEAAISDFTEAIQ--SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            E AI+DF + I+   N +A  A+   G  +  L E  EA++   KA+E  PN  +  H 
Sbjct: 157 FEEAINDFNKVIELDKNSTASMAYNYIGLCKYHLDEITEALKYYEKAIEINPNLINAYHN 216

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
             ++    +  + A+  L+  +++D  N   Y  +      +  Y +A E   K +++  
Sbjct: 217 IALIKHSGEFDDEALSYLNKALEIDPGNLETYLKIYSIKLDLELYDEANEYLNKILEMYP 276

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           + L  +  +     D    E++LE L++ L I+  F  AY+     LH L  + +A++ L
Sbjct: 277 DDLYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLNNEALEYL 336

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD-----LELDSMEKFVLQCLAF 663
              L I P++       A  Y  +   + A++DY+ AL      LE+D+ +  +   +A 
Sbjct: 337 EKALQIYPNS-------ADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVVIYNEIAL 389

Query: 664 YQKEIALY 671
            + E+ LY
Sbjct: 390 IKVELELY 397



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 129/280 (46%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C+ +I +  +  V       + +V    Y  A+S  ++ L  D    E     G    ++
Sbjct: 369 CLNKILEIDNTDVVIYNEIALIKVELELYDEALSYLNKALDIDTNNAEIYNSIGLVYYYK 428

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++ E AI +F +AI+ N S   A+   G A   + +   +IQ  +KALE  P  A     
Sbjct: 429 KDYEEAIKNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEINPQYASAYIN 488

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
            G++     ++  A++     ++++ +   AY  + LA  S+ +YK + E   KA++L  
Sbjct: 489 LGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGY 548

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           +  E + ++   Y   A  +KA+E   +VL I+     AY+     L  + ++++ ++  
Sbjct: 549 DEAEIYINIGLIYSRQAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYEETLEIY 608

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              + + P N +  Y R    +   +Y EAI+D+D  +++
Sbjct: 609 DKVIRMYPGNFDVYYERGYTKYRASKYEEAIRDFDIIINV 648



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 119/262 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S G+    +  Y  AI  F++ ++ +     A    G A     + E +I  + +A++ N
Sbjct: 420 SIGLVYYYKKDYEEAIKNFNKAIELNTSMASAYYNIGLAYYEMHDYENSIQYYNKALEIN 479

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+   G  +  LG   EAI    KALE  P+ +   +   +     +D+  ++ED
Sbjct: 480 PQYASAYINLGLIKHNLGNYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLED 539

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L  +    Y  +GL  S    Y KA E + K ++++ N + A+ ++     ++ 
Sbjct: 540 FNKALELGYDEAEIYINIGLIYSRQAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMD 599

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+ LE   +V+ +       Y+ RG   +   ++++AI+D    + ++  +    Y R
Sbjct: 600 KYEETLEIYDKVIRMYPGNFDVYYERGYTKYRASKYEEAIRDFDIIINVNSKHYNAYYYR 659

Query: 626 ASCYHAIGEYREAIKDYDAALD 647
                 +  Y EAIKD+D A++
Sbjct: 660 GCSKKYLKNYDEAIKDFDKAIE 681



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 82/347 (23%), Positives = 155/347 (44%), Gaps = 56/347 (16%)

Query: 413 MYPEALIGR---GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
           MYP+ L      G  +     +E ++    +A++ NP+  +A+     A   L  + EA+
Sbjct: 274 MYPDDLYVYDRIGNIKIDAGYMEESLEYLKKALEINPNFIDAYYDIAFALHKLDLNNEAL 333

Query: 470 QDLSKALEFEPNSAD----------------------------------ILHERGIVNFK 495
           + L KAL+  PNSAD                                  I +E  ++  +
Sbjct: 334 EYLEKALQIYPNSADTYFKMFLVKRALRDYEGALSCLNKILEIDNTDVVIYNEIALIKVE 393

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
            + ++ A+  L+  + +D  N   Y  +GL      +Y++A +   KAI+L+ +   A+ 
Sbjct: 394 LELYDEALSYLNKALDIDTNNAEIYNSIGLVYYYKKDYEEAIKNFNKAIELNTSMASAYY 453

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           ++   Y ++ + E +++   + L I+ +++ AY   GL+ H LG +K+AI      L I+
Sbjct: 454 NIGLAYYEMHDYENSIQYYNKALEINPQYASAYINLGLIKHNLGNYKEAIDYYKKALEIN 513

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL-----AFYQKEIAL 670
           P      Y  A    ++ +Y+ +++D++ AL+L  D  E ++   L     A Y K I  
Sbjct: 514 PDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINIGLIYSRQAIYDKAIEY 573

Query: 671 Y------TASKINS----EFCWFDIDGDIDPLFKEYWCK--RLHPKN 705
           Y        +K+N+     FC  ++D   + L  E + K  R++P N
Sbjct: 574 YNKVLEINPNKVNAYYNIAFCLSNMDKYEETL--EIYDKVIRMYPGN 618



 Score = 63.5 bits (153), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 103/250 (41%), Gaps = 33/250 (13%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI DF  AI+        +  RG A+  L    EAI+D ++ L+   N  D     G+
Sbjct: 56  EEAIKDFERAIELGDDGETVYYDRGLAKLYLSFYGEAIEDFNRVLQINNNDIDSRVNVGL 115

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                K++  A+      +    +N ++Y   GL    + ++++A     K I+LD+N  
Sbjct: 116 CYLYMKNYKEAINIYDEVIADFPDNINSYNNRGLCKFYLSQFEEAINDFNKVIELDKNST 175

Query: 552 EAWG---------HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
            +           HL +  + L   EKA+E       I+     AYH   L+ H      
Sbjct: 176 ASMAYNYIGLCKYHLDEITEALKYYEKAIE-------INPNLINAYHNIALIKHSGEFDD 228

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL-DSMEKFVLQCL 661
           +A+  L+  L IDP N+E                  +K Y   LDLEL D   +++ + L
Sbjct: 229 EALSYLNKALEIDPGNLETY----------------LKIYSIKLDLELYDEANEYLNKIL 272

Query: 662 AFYQKEIALY 671
             Y  ++ +Y
Sbjct: 273 EMYPDDLYVY 282



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 120/239 (50%), Gaps = 9/239 (3%)

Query: 425 RAFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
            AF+ RE E +I    + I  N  + + +  +G ++  LG   EAI+D  +A+E   +  
Sbjct: 14  EAFENREYEKSIEYIDKVIFYNGDSYDLYHNKGLSKLNLGLYEEAIKDFERAIELGDDGE 73

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
            + ++RG+       +  A+ED +  ++++  +  +   +GL    +  YK+A   + + 
Sbjct: 74  TVYYDRGLAKLYLSFYGEAIEDFNRVLQINNNDIDSRVNVGLCYLYMKNYKEAINIYDEV 133

Query: 544 IQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQVLYIDKR--FSKAYHLRGLLLHGLG 599
           I    + + ++ +  L +FY  L+  E+A+    +V+ +DK    S AY+  GL  + L 
Sbjct: 134 IADFPDNINSYNNRGLCKFY--LSQFEEAINDFNKVIELDKNSTASMAYNYIGLCKYHLD 191

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY-REAIKDYDAALDLELDSMEKFV 657
           +  +A+K     + I+P+ I   +  A   H+ GE+  EA+   + AL+++  ++E ++
Sbjct: 192 EITEALKYYEKAIEINPNLINAYHNIALIKHS-GEFDDEALSYLNKALEIDPGNLETYL 249



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/219 (20%), Positives = 100/219 (45%), Gaps = 10/219 (4%)

Query: 365 NKKFCVTRISKSKSISVDFRLSR---GIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
           N K  +    K+  I+ D+ L+     +A+++   Y +++  F++ L+      E  I  
Sbjct: 498 NYKEAIDYYKKALEINPDYSLAYYNIALAEMSLEDYKNSLEDFNKALELGYDEAEIYINI 557

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G   + Q   + AI  + + ++ NP+   A+       + + +  E ++   K +   P 
Sbjct: 558 GLIYSRQAIYDKAIEYYNKVLEINPNKVNAYYNIAFCLSNMDKYEETLEIYDKVIRMYPG 617

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           + D+ +ERG   ++   +  A+ D    + ++ ++ +AY Y G +   +  Y +A +   
Sbjct: 618 NFDVYYERGYTKYRASKYEEAIRDFDIIINVNSKHYNAYYYRGCSKKYLKNYDEAIKDFD 677

Query: 542 KAIQLDRN---FL----EAWGHLTQFYQDLANSEKALEC 573
           KAI+ + N   F       + +L ++ + + N +KA+E 
Sbjct: 678 KAIEYNANNSDFYSERASCYDYLNKYRESIENYDKAIEL 716



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 13/130 (10%)

Query: 362 AKRNKKFCVTRISKSKSI-------------SVDFRLSRGIAQVNEGKYASAISIFDQIL 408
           A  N  FC++ + K +               + D    RG  +    KY  AI  FD I+
Sbjct: 587 AYYNIAFCLSNMDKYEETLEIYDKVIRMYPGNFDVYYERGYTKYRASKYEEAIRDFDIII 646

Query: 409 KEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEA 468
             +  +  A   RG ++ + +  + AI DF +AI+ N +  + +  R      L +  E+
Sbjct: 647 NVNSKHYNAYYYRGCSKKYLKNYDEAIKDFDKAIEYNANNSDFYSERASCYDYLNKYRES 706

Query: 469 IQDLSKALEF 478
           I++  KA+E 
Sbjct: 707 IENYDKAIEL 716



 Score = 40.8 bits (94), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 12/131 (9%)

Query: 23  IDELVRVDSVMASAITARIELAKLCSL--RNWSKAIRILDSLLAQSYE-IQDICNRAFCY 79
           I++  RV  +  + I +R+ +  LC L  +N+ +AI I D ++A   + I    NR  C 
Sbjct: 93  IEDFNRVLQINNNDIDSRVNVG-LCYLYMKNYKEAINIYDEVIADFPDNINSYNNRGLCK 151

Query: 80  SQLELHKHVIRDCDKALQLDP--TLLQAYILKGCAFSALGRKEEALSVWEKGYE------ 131
             L   +  I D +K ++LD   T   AY   G     L    EAL  +EK  E      
Sbjct: 152 FYLSQFEEAINDFNKVIELDKNSTASMAYNYIGLCKYHLDEITEALKYYEKAIEINPNLI 211

Query: 132 HALHQSADLKQ 142
           +A H  A +K 
Sbjct: 212 NAYHNIALIKH 222


>gi|428223876|ref|YP_007107973.1| hypothetical protein GEI7407_0420 [Geitlerinema sp. PCC 7407]
 gi|427983777|gb|AFY64921.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
           PCC 7407]
          Length = 273

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 106/232 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S G      G+Y  AI+ +D++L   P   EA   RG A         AI+ F EAI++ 
Sbjct: 12  SHGQVLSGLGRYEGAIAKYDKVLAVQPGDYEAWTHRGYALEKLGRYSEAIASFNEAIRAQ 71

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  +G   A + E  +AI+    AL F+P  A I +  G       ++  A+E 
Sbjct: 72  PKFVLAWHGKGIVLAKMNEYEDAIKSFEWALRFQPQDAKIWYNHGKALSHLCNYPDAIES 131

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++L  EN  A+ + G+AL+++  Y +A  +   A+ ++ N   AW + +     L 
Sbjct: 132 FDKTLELRPENYKAWYHRGIALTNLNRYDEAIASFDTALVINPNCYYAWNYRSLVLAKLD 191

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             ++A +   + L I  R   A++ R      LG+  +AI  L   L + P+
Sbjct: 192 RYQEAFDGFTRSLKIKDRNPNAWYGRACCCASLGRTDEAIDYLYRSLVLSPN 243



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 1/211 (0%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI+ + + +   P   EAW  RG A   LG   EAI   ++A+  +P      H +GI
Sbjct: 24  EGAIAKYDKVLAVQPGDYEAWTHRGYALEKLGRYSEAIASFNEAIRAQPKFVLAWHGKGI 83

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V  K  ++  A++     ++   ++   +   G ALS +  Y  A E+  K ++L     
Sbjct: 84  VLAKMNEYEDAIKSFEWALRFQPQDAKIWYNHGKALSHLCNYPDAIESFDKTLELRPENY 143

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           +AW H      +L   ++A+      L I+     A++ R L+L  L ++++A    +  
Sbjct: 144 KAWYHRGIALTNLNRYDEAIASFDTALVINPNCYYAWNYRSLVLAKLDRYQEAFDGFTRS 203

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
           L I   N    Y RA C  ++G   EAI DY
Sbjct: 204 LKIKDRNPNAWYGRACCCASLGRTDEAI-DY 233



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 85/200 (42%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
           + W   GQ  + LG    AI    K L  +P   +    RG    K   ++ A+   +  
Sbjct: 8   QTWYSHGQVLSGLGRYEGAIAKYDKVLAVQPGDYEAWTHRGYALEKLGRYSEAIASFNEA 67

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           ++   +   A+   G+ L+ + EY+ A ++   A++      + W +  +    L N   
Sbjct: 68  IRAQPKFVLAWHGKGIVLAKMNEYEDAIKSFEWALRFQPQDAKIWYNHGKALSHLCNYPD 127

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A+E   + L +     KA++ RG+ L  L ++ +AI    + L I+P+       R+   
Sbjct: 128 AIESFDKTLELRPENYKAWYHRGIALTNLNRYDEAIASFDTALVINPNCYYAWNYRSLVL 187

Query: 630 HAIGEYREAIKDYDAALDLE 649
             +  Y+EA   +  +L ++
Sbjct: 188 AKLDRYQEAFDGFTRSLKIK 207



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 7/168 (4%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G  LS +G Y+ A   + K + +     EAW H     + L    +A+    + +    +
Sbjct: 14  GQVLSGLGRYEGAIAKYDKVLAVQPGDYEAWTHRGYALEKLGRYSEAIASFNEAIRAQPK 73

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           F  A+H +G++L  + +++ AIK     L   P + +  Y        +  Y +AI+ +D
Sbjct: 74  FVLAWHGKGIVLAKMNEYEDAIKSFEWALRFQPQDAKIWYNHGKALSHLCNYPDAIESFD 133

Query: 644 AALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
             L+L  ++ +       A+Y + IAL   ++ +     FD    I+P
Sbjct: 134 KTLELRPENYK-------AWYHRGIALTNLNRYDEAIASFDTALVINP 174



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 73/191 (38%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +GI      +Y  AI  F+  L+  P   +     G A +       AI  F + ++  
Sbjct: 80  GKGIVLAKMNEYEDAIKSFEWALRFQPQDAKIWYNHGKALSHLCNYPDAIESFDKTLELR 139

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   L    EAI     AL   PN     + R +V  K   +  A + 
Sbjct: 140 PENYKAWYHRGIALTNLNRYDEAIASFDTALVINPNCYYAWNYRSLVLAKLDRYQEAFDG 199

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K+   N +A+       +S+G   +A +   +++ L  N           +  L 
Sbjct: 200 FTRSLKIKDRNPNAWYGRACCCASLGRTDEAIDYLYRSLVLSPNLHRVMAQTDPSFNGLR 259

Query: 566 NSEKALECLQQ 576
           +  + +  LQ+
Sbjct: 260 HDARFVALLQE 270


>gi|71650193|ref|XP_813799.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70878718|gb|EAN91948.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 703

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 14/278 (5%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A   +G Y  AI  +   L+ DP   +AL  RG       +  AAI D+  A++  P
Sbjct: 271 RGLAYRKKGDYLRAIDEYSAALRLDPKNFKALFNRGFCSDKVEDYNAAIRDYEAAMKLEP 330

Query: 447 -------SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
                  + G ++ R G      G   EAI    KA+  + N+AD  H RG    K   +
Sbjct: 331 GYAYTYYNLGISYDRWG------GHYKEAIAMFDKAIALDSNNADFYHNRGFSQRKLGKY 384

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             AVED +  + LD ++  AY         +GE   A   + KAI +  +   A+ +   
Sbjct: 385 REAVEDYTMALSLDPQHFKAYYNRAFCYDKLGEGANAIADYTKAIAIQDDNPNAYHNRGA 444

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             +     + A+    + + +D      Y+ RG+     G+   A++DL+  + + P+N 
Sbjct: 445 AMEKAGRLDDAIADYTRAIQLDDGNPFTYNARGIAYDRRGKSDAALQDLTQAIALSPNNP 504

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                RA  +  +  + EA++DY+ +L L LD  ++F 
Sbjct: 505 IFYQNRAFVFQNMERFPEAVRDYNISLAL-LDEEKRFA 541



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 34/218 (15%)

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
           + A++ N  A E  ++RG A    G+ + AI + S AL  +P +   L  RG  + K +D
Sbjct: 256 SSALRGNEEA-ELHQQRGLAYRKKGDYLRAIDEYSAALRLDPKNFKALFNRGFCSDKVED 314

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +NAA+ D  A +KL  E   AYTY  L +S                  DR     WG   
Sbjct: 315 YNAAIRDYEAAMKL--EPGYAYTYYNLGIS-----------------YDR-----WG--- 347

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                  + ++A+    + + +D   +  YH RG     LG++++A++D +  L +DP +
Sbjct: 348 ------GHYKEAIAMFDKAIALDSNNADFYHNRGFSQRKLGKYREAVEDYTMALSLDPQH 401

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            +  Y RA CY  +GE   AI DY  A+ ++ D+   +
Sbjct: 402 FKAYYNRAFCYDKLGEGANAIADYTKAIAIQDDNPNAY 439



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 125/311 (40%), Gaps = 53/311 (17%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMY----------------------- 414
           S + DF  +RG +Q   GKY  A+  +   L  DP +                       
Sbjct: 365 SNNADFYHNRGFSQRKLGKYREAVEDYTMALSLDPQHFKAYYNRAFCYDKLGEGANAIAD 424

Query: 415 -----------PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
                      P A   RG A      L+ AI+D+T AIQ +      +  RG A    G
Sbjct: 425 YTKAIAIQDDNPNAYHNRGAAMEKAGRLDDAIADYTRAIQLDDGNPFTYNARGIAYDRRG 484

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
           +S  A+QDL++A+   PN+      R  V    + F  AV D +  + L  E K      
Sbjct: 485 KSDAALQDLTQAIALSPNNPIFYQNRAFVFQNMERFPEAVRDYNISLALLDEEKR----- 539

Query: 524 GLALSSIGEYKKAEEAHLKAIQ--LDRNFLEAW-GHLTQFYQDLANSEKALECLQQVLYI 580
             A  +  + K  +E +L  ++   +R F  A  GH           E A+     V+  
Sbjct: 540 -FANGATSKGKATQELNLLILKQYFNRGFCYAREGHY----------EAAICDFSMVMAT 588

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           +     A + RG+    +G HK A++D S  + +D  N E  + R +   ++GEY  A+ 
Sbjct: 589 NPDNLVALYNRGICHDKVGNHKLAVEDFSHLIELDAENAEAHFSRGTALESLGEYAMALD 648

Query: 641 DYDAALDLELD 651
           DY  A  L++D
Sbjct: 649 DYAVAFKLDVD 659



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 127/336 (37%), Gaps = 75/336 (22%)

Query: 314 DSASLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRI 373
           D A   DSN N++ Y     S  K     E+    +     L     +A  N+ FC  ++
Sbjct: 358 DKAIALDSN-NADFYHNRGFSQRKLGKYREAVEDYTMALS-LDPQHFKAYYNRAFCYDKL 415

Query: 374 SKSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
            +  +   D+  +             RG A    G+   AI+ + + ++ D   P     
Sbjct: 416 GEGANAIADYTKAIAIQDDNPNAYHNRGAAMEKAGRLDDAIADYTRAIQLDDGNPFTYNA 475

Query: 421 RGTARAFQRELEAAISDFTEAIQSNP---------------------------------- 446
           RG A   + + +AA+ D T+AI  +P                                  
Sbjct: 476 RGIAYDRRGKSDAALQDLTQAIALSPNNPIFYQNRAFVFQNMERFPEAVRDYNISLALLD 535

Query: 447 ----------SAGEA-----------WKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                     S G+A           +  RG   A  G    AI D S  +   P++   
Sbjct: 536 EEKRFANGATSKGKATQELNLLILKQYFNRGFCYAREGHYEAAICDFSMVMATNPDNLVA 595

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L+ RGI + K  +   AVED S  ++LD EN  A+   G AL S+GEY  A + +  A +
Sbjct: 596 LYNRGICHDKVGNHKLAVEDFSHLIELDAENAEAHFSRGTALESLGEYAMALDDYAVAFK 655

Query: 546 L--DRNFLEAWGHLTQF---YQDLANSEKALECLQQ 576
           L  DR+ L   G L +F   +  +  S++ L  L++
Sbjct: 656 LDVDRSDLVDEGDLAKFKSEHHAMVASQRVLRLLKE 691



 Score = 47.0 bits (110), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           A+ LRG+    L    KAI D ++ L IDPS+    Y RA+C++  G Y  AI DY+ A 
Sbjct: 88  AFFLRGVCHVKLSWIDKAIADFTAALEIDPSHSRSTYERAACHNRKGNYTAAILDYERA- 146

Query: 647 DLELDSM 653
            L+ DSM
Sbjct: 147 -LQHDSM 152


>gi|218245568|ref|YP_002370939.1| hypothetical protein PCC8801_0698 [Cyanothece sp. PCC 8801]
 gi|218166046|gb|ACK64783.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
          Length = 784

 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 119/234 (50%), Gaps = 2/234 (0%)

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
           +G    R +Q E   AI    + I   P+   +W  RG   ++LG   EA++ L +ALE 
Sbjct: 282 LGFILFRIYQYE--EAIFCLDKVINIKPNDDSSWHLRGLCLSSLGRLEEALESLDQALEV 339

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
            PN + I   +G +  + +++  A+   +  ++LD EN   +   G  LS + +Y++A  
Sbjct: 340 NPNDSFIWGNKGKLLNQLEEYQQALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALN 399

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
           +  KA+++  N+ EAWG       +L   ++AL    +++ I+    + +  RG+ L  L
Sbjct: 400 SFDKALEIHSNYYEAWGMRGVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYL 459

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
            +H++A+K L+  L I+  +      +      +G Y+EA++ +D A+ L+ ++
Sbjct: 460 KRHQEALKSLNKALEINSDDDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNN 513



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/281 (20%), Positives = 131/281 (46%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           FC+ ++   K         RG+   + G+   A+   DQ L+ +P        +G     
Sbjct: 297 FCLDKVINIKPNDDSSWHLRGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNKGKLLNQ 356

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
             E + A+  F  +++ +P   E W  +G+  + L +  EA+    KALE   N  +   
Sbjct: 357 LEEYQQALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSNYYEAWG 416

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG++    + +  A+      ++++  +   +   G+AL  +  +++A ++  KA++++
Sbjct: 417 MRGVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLNKALEIN 476

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +    WG+     ++L + ++ALE     + +D    + +  +G+ L  L Q+++A+K 
Sbjct: 477 SDDDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNNDRGWFHKGITLIKLKQYQEALKC 536

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           L   L IDP++   L  + +  + +  Y +A+  +  A+++
Sbjct: 537 LDKALEIDPNDHNTLIEKGNTLYLLQCYEQALISFKKAIEV 577



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/290 (22%), Positives = 140/290 (48%), Gaps = 10/290 (3%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  AI   D+++   P    +   RG   +    LE A+    +A++ NP+    W  +
Sbjct: 291 QYEEAIFCLDKVINIKPNDDSSWHLRGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNK 350

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G+    L E  +A+   +++LE +P + +I + +G V  + K +  A+      +++   
Sbjct: 351 GKLLNQLEEYQQALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSN 410

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              A+   G+ L ++  YK+A  +  K I+++ N  + W +       L   ++AL+ L 
Sbjct: 411 YYEAWGMRGVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLN 470

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + L I+      +  +G++L  LG +++A++   + + +D +N    + +      + +Y
Sbjct: 471 KALEINSDDDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNNDRGWFHKGITLIKLKQY 530

Query: 636 REAIKDYDAALDLELDS----MEK----FVLQCLAFYQKEIALYTASKIN 677
           +EA+K  D AL+++ +     +EK    ++LQC  + Q  I+   A ++N
Sbjct: 531 QEALKCLDKALEIDPNDHNTLIEKGNTLYLLQC--YEQALISFKKAIEVN 578



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 106/223 (47%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+  F++ L+ DP   E    +G   +  ++ E A++ F +A++ + +  EAW  R
Sbjct: 359 EYQQALLSFNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSNYYEAWGMR 418

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L    +A+    K +E  PN       RGI     K    A++ L+  ++++ +
Sbjct: 419 GVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLNKALEINSD 478

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +   +   G+ L ++G Y++A E+   AI+LD N    W H       L   ++AL+CL 
Sbjct: 479 DDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNNDRGWFHKGITLIKLKQYQEALKCLD 538

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           + L ID         +G  L+ L  +++A+      + ++P++
Sbjct: 539 KALEIDPNDHNTLIEKGNTLYLLQCYEQALISFKKAIEVNPND 581



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/195 (21%), Positives = 93/195 (47%)

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           ++G     +G  +E I    +A++  PN   +    G + F+   +  A+  L   + + 
Sbjct: 247 KKGNLLFKVGYPIEGINSYYEAVDISPNYIQVWERLGFILFRIYQYEEAIFCLDKVINIK 306

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
             + S++   GL LSS+G  ++A E+  +A++++ N    WG+  +    L   ++AL  
Sbjct: 307 PNDDSSWHLRGLCLSSLGRLEEALESLDQALEVNPNDSFIWGNKGKLLNQLEEYQQALLS 366

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             + L +D    + ++L+G +L  L ++++A+      L I  +  E   +R      + 
Sbjct: 367 FNRSLELDPENDEIWYLKGKVLSELKKYEEALNSFDKALEIHSNYYEAWGMRGVILVNLQ 426

Query: 634 EYREAIKDYDAALDL 648
            Y++A+  +D  +++
Sbjct: 427 YYKQALISFDKLIEI 441



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/266 (22%), Positives = 120/266 (45%), Gaps = 7/266 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+  VN   Y  A+  FD++++ +P   +  + RG A  + +  + A+    +A++ N 
Sbjct: 418 RGVILVNLQYYKQALISFDKLIEINPNDYQGWLNRGIALIYLKRHQEALKSLNKALEINS 477

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                W  +G     LG   EA++    A++ + N+      +GI   K K +  A++ L
Sbjct: 478 DDDMIWGNKGVVLRNLGHYQEALESFDNAIKLDFNNDRGWFHKGITLIKLKQYQEALKCL 537

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQD 563
              +++D  + +     G  L  +  Y++A  +  KAI+++ N  + W   G+L    Q 
Sbjct: 538 DKALEIDPNDHNTLIEKGNTLYLLQCYEQALISFKKAIEVNPNDSDDWNACGYLL-LNQS 596

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
            AN +   +   +++ I    SK   L    L+    +++A+      + + P       
Sbjct: 597 SANDQPVFDIPLEIIPIVN--SKNNQLNE-SLNNQKSYQEALSYFDKAIELKPDYSLVFA 653

Query: 624 LRASCYHAIGEYREAIKDYDAALDLE 649
            R+   + +GEY+EA+K    A+ L+
Sbjct: 654 NRSFPLYYLGEYQEALKSCIKAIKLK 679


>gi|383771778|ref|YP_005450843.1| hypothetical protein S23_35310 [Bradyrhizobium sp. S23321]
 gi|381359901|dbj|BAL76731.1| hypothetical protein S23_35310 [Bradyrhizobium sp. S23321]
          Length = 366

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 109/227 (48%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I+  +  ++++P+   A   RG+     G++  A+ D ++A++ +P  +D+ + RGI   
Sbjct: 37  ITGCSAVLKADPNDVHALANRGEMFRRKGDAERALADFNRAIDLDPKDSDLWYNRGIAYD 96

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D + A+ D +  ++L+  +   Y   G +L    EY++A   + +AI+LD  F  A+
Sbjct: 97  DLGDKDHAIADYTRAIRLNARDALYYNNRGNSLIDKNEYERAMADYDQAIKLDPKFALAY 156

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            +    Y+D    ++AL      + +D  +  AY  R  +    G   +A+ D +  L +
Sbjct: 157 FNRGTAYRDHRQDDRALADFDLSIKLDPNYGPAYGNRARVFRDRGDRPRALADFAKSLQL 216

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
            P+N    Y R + Y    EY  A++DYD ++    +  + F  +C 
Sbjct: 217 SPNNDRDFYARGNMYFDTYEYVLALEDYDRSIKANGNRADVFNSRCF 263



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 110/235 (46%), Gaps = 10/235 (4%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG + +++ +Y  A++ +DQ +K DP +  A   RGTA    R+ + A++DF  +I+ +
Sbjct: 124 NRGNSLIDKNEYERAMADYDQAIKLDPKFALAYFNRGTAYRDHRQDDRALADFDLSIKLD 183

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+ G A+  R +     G+   A+ D +K+L+  PN+    + RG + F   ++  A+ED
Sbjct: 184 PNYGPAYGNRARVFRDRGDRPRALADFAKSLQLSPNNDRDFYARGNMYFDTYEYVLALED 243

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAE---EAHLKAIQLDRNFLE--AWGHLTQF 560
               +K +      +       + +G  + A    +  L+    D + L+  A  HL   
Sbjct: 244 YDRSIKANGNRADVFNSRCFTRAILGRLEAALADCDQSLRMASNDPDTLDSRALAHLK-- 301

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
              L N + A+      L    +   + + RGL    +G +  A +D+++   I+
Sbjct: 302 ---LGNLDAAIADYDAALGTKPQLDSSLYGRGLAKRKMGDNDGAERDIAAARAIN 353



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 105/252 (41%), Gaps = 8/252 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG     +G    A++ F++ +  DP   +    RG A     + + AI+D+T AI+ N
Sbjct: 56  NRGEMFRRKGDAERALADFNRAIDLDPKDSDLWYNRGIAYDDLGDKDHAIADYTRAIRLN 115

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                 +  RG +     E   A+ D  +A++ +P  A     RG      +  + A+ D
Sbjct: 116 ARDALYYNNRGNSLIDKNEYERAMADYDQAIKLDPKFALAYFNRGTAYRDHRQDDRALAD 175

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL----DRNFLEAWGHLTQFY 561
               +KLD     AY          G+  +A     K++QL    DR+F  A G++   Y
Sbjct: 176 FDLSIKLDPNYGPAYGNRARVFRDRGDRPRALADFAKSLQLSPNNDRDFY-ARGNM---Y 231

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            D      ALE   + +  +   +  ++ R      LG+ + A+ D    L +  ++ + 
Sbjct: 232 FDTYEYVLALEDYDRSIKANGNRADVFNSRCFTRAILGRLEAALADCDQSLRMASNDPDT 291

Query: 622 LYLRASCYHAIG 633
           L  RA  +  +G
Sbjct: 292 LDSRALAHLKLG 303


>gi|428306730|ref|YP_007143555.1| serine/threonine protein kinase [Crinalium epipsammum PCC 9333]
 gi|428248265|gb|AFZ14045.1| serine/threonine protein kinase with TPR repeats [Crinalium
           epipsammum PCC 9333]
          Length = 705

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 125/278 (44%)

Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
           K  +V+  + RG A  N  KY  AI  F++ ++    YPEA  GRG A    +  + AI+
Sbjct: 395 KQNAVEAWVGRGDALNNLKKYPDAIDAFEKAIQLQINYPEAWKGRGEALIGLQRYQEAIT 454

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
            + +A+Q  P    +W  RG A   L    EAI    +A+ ++P+ +   + RG      
Sbjct: 455 SYDKALQFQPDDYVSWNSRGWALHNLQRYDEAISSYEQAVSYKPDYSVAWYNRGNSLVNL 514

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
                A+E     VK    N  A+      L ++G+Y +A E++ +A++L ++  + W  
Sbjct: 515 NKNKEAIESYDQAVKFQPSNYQAWYSRANILVNLGKYSEAVESYDQAVKLQQSNYQTWYS 574

Query: 557 LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                  L   E A+    + + + +   + ++ RG  L+ L +++ AI   +  +   P
Sbjct: 575 RGWALHQLQRYESAIASYSKAIELKRNNYQTWYNRGNSLYQLQRYEDAIASYAQAVRYKP 634

Query: 617 SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
              E  Y R +    +  Y  AI  YD A+  + + +E
Sbjct: 635 DYYEAWYSRGNALLNLKRYESAIASYDQAIRYKPNYLE 672



 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 136/300 (45%), Gaps = 7/300 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L++G   +   +Y  A   ++Q ++      EA +GRG A    ++   AI  F +AIQ 
Sbjct: 369 LAKGKMLLALKRYEDAQQAYEQAIQIKQNAVEAWVGRGDALNNLKKYPDAIDAFEKAIQL 428

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             +  EAWK RG+A   L    EAI    KAL+F+P+     + RG      + ++ A+ 
Sbjct: 429 QINYPEAWKGRGEALIGLQRYQEAITSYDKALQFQPDDYVSWNSRGWALHNLQRYDEAIS 488

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                V    +   A+   G +L ++ + K+A E++ +A++   +  +AW        +L
Sbjct: 489 SYEQAVSYKPDYSVAWYNRGNSLVNLNKNKEAIESYDQAVKFQPSNYQAWYSRANILVNL 548

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               +A+E   Q + + +   + ++ RG  LH L +++ AI   S  + +  +N +  Y 
Sbjct: 549 GKYSEAVESYDQAVKLQQSNYQTWYSRGWALHQLQRYESAIASYSKAIELKRNNYQTWYN 608

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           R +  + +  Y +AI  Y  A+  + D  E       A+Y +  AL    +  S    +D
Sbjct: 609 RGNSLYQLQRYEDAIASYAQAVRYKPDYYE-------AWYSRGNALLNLKRYESAIASYD 661



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 127/279 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A     KY  A+ ++ + +   P Y EA + +G      +  E A   + +AIQ   
Sbjct: 337 RGNALAELNKYEDALKVYQKAINLKPEYLEAWLAKGKMLLALKRYEDAQQAYEQAIQIKQ 396

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +A EAW  RG A   L +  +AI    KA++ + N  +    RG      + +  A+   
Sbjct: 397 NAVEAWVGRGDALNNLKKYPDAIDAFEKAIQLQINYPEAWKGRGEALIGLQRYQEAITSY 456

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++   ++  ++   G AL ++  Y +A  ++ +A+    ++  AW +      +L  
Sbjct: 457 DKALQFQPDDYVSWNSRGWALHNLQRYDEAISSYEQAVSYKPDYSVAWYNRGNSLVNLNK 516

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           +++A+E   Q +       +A++ R  +L  LG++ +A++     + +  SN +  Y R 
Sbjct: 517 NKEAIESYDQAVKFQPSNYQAWYSRANILVNLGKYSEAVESYDQAVKLQQSNYQTWYSRG 576

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
              H +  Y  AI  Y  A++L+ ++ + +  +  + YQ
Sbjct: 577 WALHQLQRYESAIASYSKAIELKRNNYQTWYNRGNSLYQ 615



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 128/275 (46%), Gaps = 8/275 (2%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L  RG A A   + E A+  + +AI   P   EAW  +G+   AL    +A Q   +A++
Sbjct: 334 LYQRGNALAELNKYEDALKVYQKAINLKPEYLEAWLAKGKMLLALKRYEDAQQAYEQAIQ 393

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
            + N+ +    RG      K +  A++     ++L      A+   G AL  +  Y++A 
Sbjct: 394 IKQNAVEAWVGRGDALNNLKKYPDAIDAFEKAIQLQINYPEAWKGRGEALIGLQRYQEAI 453

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
            ++ KA+Q   +   +W        +L   ++A+   +Q +     +S A++ RG  L  
Sbjct: 454 TSYDKALQFQPDDYVSWNSRGWALHNLQRYDEAISSYEQAVSYKPDYSVAWYNRGNSLVN 513

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK-- 655
           L ++K+AI+     +   PSN +  Y RA+    +G+Y EA++ YD A+ L+  + +   
Sbjct: 514 LNKNKEAIESYDQAVKFQPSNYQAWYSRANILVNLGKYSEAVESYDQAVKLQQSNYQTWY 573

Query: 656 ---FVLQCLAFYQKEIALYTAS---KINSEFCWFD 684
              + L  L  Y+  IA Y+ +   K N+   W++
Sbjct: 574 SRGWALHQLQRYESAIASYSKAIELKRNNYQTWYN 608



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 8/191 (4%)

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
           A G ++  I + S A E        L++RG    +   +  A++     + L  E   A+
Sbjct: 317 AGGITINNIINYSNATE--------LYQRGNALAELNKYEDALKVYQKAINLKPEYLEAW 368

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              G  L ++  Y+ A++A+ +AIQ+ +N +EAW        +L     A++  ++ + +
Sbjct: 369 LAKGKMLLALKRYEDAQQAYEQAIQIKQNAVEAWVGRGDALNNLKKYPDAIDAFEKAIQL 428

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
              + +A+  RG  L GL ++++AI      L   P +      R    H +  Y EAI 
Sbjct: 429 QINYPEAWKGRGEALIGLQRYQEAITSYDKALQFQPDDYVSWNSRGWALHNLQRYDEAIS 488

Query: 641 DYDAALDLELD 651
            Y+ A+  + D
Sbjct: 489 SYEQAVSYKPD 499


>gi|365119111|ref|ZP_09337405.1| hypothetical protein HMPREF1033_00751 [Tannerella sp.
           6_1_58FAA_CT1]
 gi|363648829|gb|EHL87975.1| hypothetical protein HMPREF1033_00751 [Tannerella sp.
           6_1_58FAA_CT1]
          Length = 712

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 116/286 (40%), Gaps = 35/286 (12%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++K  P   E    R  A+    +   A  D    ++ NP    A++ RG
Sbjct: 52  YILSIQYFNQVIKVKPYMAEPYFYRAAAKLSLEDFRGAEEDCNLCLERNPFITGAYQVRG 111

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN---------------- 500
            AR  LG+   AI D ++ L++ P     L  + I   + K ++                
Sbjct: 112 IARQNLGDYQGAIDDYNEGLKYAPEDRTFLGNKAIAEVQLKKYDDAEKSFDKLIKTHPSY 171

Query: 501 ------------------AAVEDLSACVKLDKENKSAYTYLGLA-LSSIGEYKKAEEAHL 541
                              A+ED+   + LDK    AY    +       +Y+ A     
Sbjct: 172 YNGYLSRSQFWLEKKDTLKAIEDIDKAISLDKHLSYAYAQRAIIKFQYTKDYQDALADMN 231

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +A++LD N    + +       L +    +    +V+ ID     A++ RGLL   +G+ 
Sbjct: 232 EALRLDPNMSSYYINRALIKYHLDDLRGTMADYDRVVEIDPNNLMAHYNRGLLRAQVGEK 291

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            KAI+D S  L  +P N    Y RA  Y  +G YR A+KDY+  LD
Sbjct: 292 NKAIEDFSFVLKYEPDNYFAYYNRAVLYDELGNYRAAVKDYNKVLD 337



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 111/225 (49%), Gaps = 9/225 (4%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           +I  F + I+  P   E +  R  A+ +L +   A +D +  LE  P        RGI  
Sbjct: 55  SIQYFNQVIKVKPYMAEPYFYRAAAKLSLEDFRGAEEDCNLCLERNPFITGAYQVRGIAR 114

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLG---LALSSIGEYKKAEEAHLKAIQLDRNF 550
               D+  A++D +  +K   E++   T+LG   +A   + +Y  AE++  K I+   ++
Sbjct: 115 QNLGDYQGAIDDYNEGLKYAPEDR---TFLGNKAIAEVQLKKYDDAEKSFDKLIKTHPSY 171

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL-LHGLGQHKKAIKDLS 609
              +   +QF+ +  ++ KA+E + + + +DK  S AY  R ++       ++ A+ D++
Sbjct: 172 YNGYLSRSQFWLEKKDTLKAIEDIDKAISLDKHLSYAYAQRAIIKFQYTKDYQDALADMN 231

Query: 610 SGLGIDPSNIECLYL-RASCYHAIGEYREAIKDYDAALDLELDSM 653
             L +DP N+   Y+ RA   + + + R  + DYD  ++++ +++
Sbjct: 232 EALRLDP-NMSSYYINRALIKYHLDDLRGTMADYDRVVEIDPNNL 275



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 6/140 (4%)

Query: 377 KSISVDFRLS-----RGIAQVNEGK-YASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           K+IS+D  LS     R I +    K Y  A++  ++ L+ DP      I R   +    +
Sbjct: 197 KAISLDKHLSYAYAQRAIIKFQYTKDYQDALADMNEALRLDPNMSSYYINRALIKYHLDD 256

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           L   ++D+   ++ +P+   A   RG  RA +GE  +AI+D S  L++EP++    + R 
Sbjct: 257 LRGTMADYDRVVEIDPNNLMAHYNRGLLRAQVGEKNKAIEDFSFVLKYEPDNYFAYYNRA 316

Query: 491 IVNFKFKDFNAAVEDLSACV 510
           ++  +  ++ AAV+D +  +
Sbjct: 317 VLYDELGNYRAAVKDYNKVL 336



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y   +  +D++++  P +  A   R   R  QR+  AA++D+ EAI+  P   +A+  RG
Sbjct: 617 YEMVLRDYDKVIEMSPQFVYAYYNRANVRCAQRDFRAALADYNEAIRLRPDFSDAYFNRG 676

Query: 457 QARAALGESVEAIQDLSKALEF 478
                LGE+ + I DLSKA E 
Sbjct: 677 LVYVFLGETQKGIADLSKAGEL 698



 Score = 42.7 bits (99), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 107/564 (18%), Positives = 213/564 (37%), Gaps = 106/564 (18%)

Query: 16  THKTICEIDELVRVDSVMASAITARIELAKLCSLRNWSKAIRILDSLL-----AQSYEIQ 70
           T K I +ID+ + +D  ++ A   R  + K    +++  A+  ++  L       SY I 
Sbjct: 188 TLKAIEDIDKAISLDKHLSYAYAQR-AIIKFQYTKDYQDALADMNEALRLDPNMSSYYI- 245

Query: 71  DICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY 130
              NRA     L+  +  + D D+ +++DP  L A+  +G   + +G K +A+       
Sbjct: 246 ---NRALIKYHLDDLRGTMADYDRVVEIDPNNLMAHYNRGLLRAQVGEKNKAI------- 295

Query: 131 EHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSE 190
                                   +D S   +Y+  N  +                    
Sbjct: 296 ------------------------EDFSFVLKYEPDNYFAY------------------- 312

Query: 191 NHNKSDICDSSSQSRDVSETCSKS-SHDPDLCNG---RSDEAKGGSSVPVSKSGLHINGK 246
            +N++ + D     R   +  +K     PD  +G   RS+  +    +   KS      K
Sbjct: 313 -YNRAVLYDELGNYRAAVKDYNKVLDQYPDFYSGYYARSEAKRKSGDISGGKSDYQKAMK 371

Query: 247 LREVSENHNGSS-------DGSKSTHASRDASEINRQSSDDFDICNGPIDKASVNERHGR 299
           L E  +N N S        D S++  + +DA ++ ++S  + +      D+  V +    
Sbjct: 372 LYEQQKNTNKSYEEVADNIDESENDTSEKDADKVRKESDKNIN----KFDRLLVADNTDM 427

Query: 300 QTNGTHDVHDKLSSDSASLNDSNTNSESY------SKSSISDNKSSDSTESRSKLSFKWD 353
           ++  T+++  ++   + ++  +     +Y       K +IS     ++      L ++  
Sbjct: 428 KSKYTNEIRGRVQDKNFNVEIAPAFVLTYYEKPDQVKQTISFVPEVENLNRAGILPYRVL 487

Query: 354 ML--KETSNEAKRNKKFCVTRISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQ 406
           +   +   + AK NK F V+    SK I ++         R +  +    +AS++   ++
Sbjct: 488 LTNAEMALDSAKINKHF-VSVNDYSKLIEINPNNAVPYFGRALDFMLIQDFASSLDDLNR 546

Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW-------------K 453
           +++    +  A   R   R  Q E  A+  DF    Q++ S  EA+              
Sbjct: 547 VIQLSDNFVLAYFMRAVVRFKQIEYRASTQDFD--TQNSKSVTEAFSLPKNSASSILLPN 604

Query: 454 RRGQARAALGESVEAI-QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
                + ++G   E + +D  K +E  P      + R  V    +DF AA+ D +  ++L
Sbjct: 605 SSSNKKESVGMDYEMVLRDYDKVIEMSPQFVYAYYNRANVRCAQRDFRAALADYNEAIRL 664

Query: 513 DKENKSAYTYLGLALSSIGEYKKA 536
             +   AY   GL    +GE +K 
Sbjct: 665 RPDFSDAYFNRGLVYVFLGETQKG 688



 Score = 42.7 bits (99), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 14/196 (7%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            +++D+++ I+ NP+    +  R      + +   ++ DL++ ++   N       R +V
Sbjct: 505 VSVNDYSKLIEINPNNAVPYFGRALDFMLIQDFASSLDDLNRVIQLSDNFVLAYFMRAVV 564

Query: 493 NFKFKDFNAAVED--------LSACVKLDKENKSAYTYLGLALS---SIG-EYKKAEEAH 540
            FK  ++ A+ +D        ++    L K + S+      + +   S+G +Y+     +
Sbjct: 565 RFKQIEYRASTQDFDTQNSKSVTEAFSLPKNSASSILLPNSSSNKKESVGMDYEMVLRDY 624

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            K I++   F+ A+ +         +   AL    + + +   FS AY  RGL+   LG+
Sbjct: 625 DKVIEMSPQFVYAYYNRANVRCAQRDFRAALADYNEAIRLRPDFSDAYFNRGLVYVFLGE 684

Query: 601 HKKAIKDLSSG--LGI 614
            +K I DLS    LGI
Sbjct: 685 TQKGIADLSKAGELGI 700


>gi|297618844|ref|YP_003706949.1| hypothetical protein Mvol_0316 [Methanococcus voltae A3]
 gi|297377821|gb|ADI35976.1| TPR repeat-containing protein [Methanococcus voltae A3]
          Length = 844

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 118/246 (47%), Gaps = 2/246 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  A+   ++I +     P+    RG   +  ++ + AI+DFT AI    +  + +  R
Sbjct: 24  KYVEALDKLNKIEEFQNKNPDFYTNRGIVYSELKQYDNAINDFTTAIMLKNNDPKLYFNR 83

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L +  EA++D   AL       D+   RGI+  + K ++ A++D +  + + K+
Sbjct: 84  GTLYKILKKYSEALKDYDMALSLNSKYTDVYLNRGIIYSELKKYDKAIDDFTTAISIRKD 143

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +KS Y+  GL  + +  Y  A E    A+ +D    +A+ +    Y +L     A+E  Q
Sbjct: 144 SKS-YSNRGLIYTKLKMYNNAMEDFNNALNIDYTNTDAYENRGCLYGELKKYNNAMEDFQ 202

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           +   +    +  Y+L G L   L ++ KA+  L+  L +D  N++ L  R + Y  + EY
Sbjct: 203 KADELKNDSNTKYNL-GTLYKMLKKYDKALFYLNKALELDNKNVKALINRRNIYVELREY 261

Query: 636 REAIKD 641
            +A+KD
Sbjct: 262 DKALKD 267



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 152/322 (47%), Gaps = 8/322 (2%)

Query: 347 KLSFKWDMLKETSNEAKRNKKFC-----VTRISKSKSISVDFRLSRGIAQVNEGKYASAI 401
           ++S K+  L    N   +N K+      + +I + ++ + DF  +RGI      +Y +AI
Sbjct: 4   RVSKKYGKLPYEINNLLKNHKYVEALDKLNKIEEFQNKNPDFYTNRGIVYSELKQYDNAI 63

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           + F   +      P+    RGT     ++   A+ D+  A+  N    + +  RG   + 
Sbjct: 64  NDFTTAIMLKNNDPKLYFNRGTLYKILKKYSEALKDYDMALSLNSKYTDVYLNRGIIYSE 123

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           L +  +AI D + A+    +S      RG++  K K +N A+ED +  + +D  N  AY 
Sbjct: 124 LKKYDKAIDDFTTAISIRKDSKS-YSNRGLIYTKLKMYNNAMEDFNNALNIDYTNTDAYE 182

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G     + +Y  A E   KA +L +N      +L   Y+ L   +KAL  L + L +D
Sbjct: 183 NRGCLYGELKKYNNAMEDFQKADEL-KNDSNTKYNLGTLYKMLKKYDKALFYLNKALELD 241

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
            +  KA   R  +   L ++ KA+KD +  + I  ++ +  + R + +    +Y +A+KD
Sbjct: 242 NKNVKALINRRNIYVELREYDKALKDNNYIINIQNNS-KSYFERGTLHKIFKKYDKALKD 300

Query: 642 YDAALDLELDSMEKFVLQCLAF 663
           Y+ A++L+ ++ + ++ + + +
Sbjct: 301 YNIAINLDNNNYDAYINRGIVY 322



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 35/312 (11%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG       KY+ A+  +D  L  +  Y +  + RG   +  ++ + AI DFT AI S
Sbjct: 81  FNRGTLYKILKKYSEALKDYDMALSLNSKYTDVYLNRGIIYSELKKYDKAIDDFTTAI-S 139

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
                +++  RG     L     A++D + AL  +  + D    RG +  + K +N A+E
Sbjct: 140 IRKDSKSYSNRGLIYTKLKMYNNAMEDFNNALNIDYTNTDAYENRGCLYGELKKYNNAME 199

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D     +L  ++ + Y  LG     + +Y KA     KA++LD   ++A  +    Y +L
Sbjct: 200 DFQKADELKNDSNTKYN-LGTLYKMLKKYDKALFYLNKALELDNKNVKALINRRNIYVEL 258

Query: 565 ANSEKALE-------------------CLQQV--------------LYIDKRFSKAYHLR 591
              +KAL+                    L ++              + +D     AY  R
Sbjct: 259 REYDKALKDNNYIINIQNNSKSYFERGTLHKIFKKYDKALKDYNIAINLDNNNYDAYINR 318

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G++   L Q+  A++D ++ + I+P N      R+  Y  +    +AI+D + A+ L+ +
Sbjct: 319 GIVYSELKQYDNAMEDFNNAIKINPKNPMGYNNRSFIYLTLNNKTKAIEDLNRAVALDKN 378

Query: 652 SMEKFVLQCLAF 663
           + E ++ + + +
Sbjct: 379 NYEVYLNRSIGY 390



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 117/260 (45%), Gaps = 2/260 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+       Y +A+  F+  L  D    +A   RG      ++   A+ DF +A +  
Sbjct: 149 NRGLIYTKLKMYNNAMEDFNNALNIDYTNTDAYENRGCLYGELKKYNNAMEDFQKADELK 208

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
             +   +   G     L +  +A+  L+KALE +  +   L  R  +  + ++++ A++D
Sbjct: 209 NDSNTKY-NLGTLYKMLKKYDKALFYLNKALELDNKNVKALINRRNIYVELREYDKALKD 267

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + +   +KS Y   G       +Y KA + +  AI LD N  +A+ +    Y +L 
Sbjct: 268 NNYIINIQNNSKS-YFERGTLHKIFKKYDKALKDYNIAINLDNNNYDAYINRGIVYSELK 326

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             + A+E     + I+ +    Y+ R  +   L    KAI+DL+  + +D +N E    R
Sbjct: 327 QYDNAMEDFNNAIKINPKNPMGYNNRSFIYLTLNNKTKAIEDLNRAVALDKNNYEVYLNR 386

Query: 626 ASCYHAIGEYREAIKDYDAA 645
           +  Y  + +  ++ +DY+ +
Sbjct: 387 SIGYDKLDQIEKSNQDYNES 406



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 42/81 (51%)

Query: 49  LRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYIL 108
           L+ + KAI    + ++   + +   NR   Y++L+++ + + D + AL +D T   AY  
Sbjct: 124 LKKYDKAIDDFTTAISIRKDSKSYSNRGLIYTKLKMYNNAMEDFNNALNIDYTNTDAYEN 183

Query: 109 KGCAFSALGRKEEALSVWEKG 129
           +GC +  L +   A+  ++K 
Sbjct: 184 RGCLYGELKKYNNAMEDFQKA 204


>gi|424836062|ref|ZP_18260719.1| TPR repeat-containing protein [Clostridium sporogenes PA 3679]
 gi|365977464|gb|EHN13563.1| TPR repeat-containing protein [Clostridium sporogenes PA 3679]
          Length = 251

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 34/210 (16%)

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           +T AI+ NPS   A+  R +    L +  +AI+D +K LE +P   D  + R IV +  K
Sbjct: 45  YTIAIKLNPSFVNAYFNRAELYKELEKYNKAIEDYNKILELDPKDKDCYNNRAIVYYLIK 104

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           D+N A++DL   V +DK  K+ Y   G+    I +YK+A     KAI             
Sbjct: 105 DYNKALKDLDKLVSMDKHYKNIYFNRGMIFLGIADYKRAAIEFTKAIH------------ 152

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
               +D  +SE                  AY  R    + L ++  +IKD ++ + + P 
Sbjct: 153 ----EDSKDSE------------------AYENRAFAYYNLKKYSPSIKDYTNAIKLTPE 190

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALD 647
           N      R + Y+ I  Y +AI DY  AL+
Sbjct: 191 NKNIYLNRGTIYYKIKNYEKAISDYMKALN 220



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 70/142 (49%)

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +KL+    +AY         + +Y KA E + K ++LD    + + +    Y  + +
Sbjct: 46  TIAIKLNPSFVNAYFNRAELYKELEKYNKAIEDYNKILELDPKDKDCYNNRAIVYYLIKD 105

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             KAL+ L +++ +DK +   Y  RG++  G+  +K+A  + +  +  D  + E    RA
Sbjct: 106 YNKALKDLDKLVSMDKHYKNIYFNRGMIFLGIADYKRAAIEFTKAIHEDSKDSEAYENRA 165

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
             Y+ + +Y  +IKDY  A+ L
Sbjct: 166 FAYYNLKKYSPSIKDYTNAIKL 187



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 65/150 (43%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  AI  +++IL+ DP   +    R       ++   A+ D  + +  +      +  R
Sbjct: 71  KYNKAIEDYNKILELDPKDKDCYNNRAIVYYLIKDYNKALKDLDKLVSMDKHYKNIYFNR 130

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     + +   A  + +KA+  +   ++    R    +  K ++ +++D +  +KL  E
Sbjct: 131 GMIFLGIADYKRAAIEFTKAIHEDSKDSEAYENRAFAYYNLKKYSPSIKDYTNAIKLTPE 190

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           NK+ Y   G     I  Y+KA   ++KA+ 
Sbjct: 191 NKNIYLNRGTIYYKIKNYEKAISDYMKALN 220



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 61/135 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I       Y  A+   D+++  D  Y      RG       + + A  +FT+AI  +
Sbjct: 95  NRAIVYYLIKDYNKALKDLDKLVSMDKHYKNIYFNRGMIFLGIADYKRAAIEFTKAIHED 154

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EA++ R  A   L +   +I+D + A++  P + +I   RG + +K K++  A+ D
Sbjct: 155 SKDSEAYENRAFAYYNLKKYSPSIKDYTNAIKLTPENKNIYLNRGTIYYKIKNYEKAISD 214

Query: 506 LSACVKLDKENKSAY 520
               +   +++ S Y
Sbjct: 215 YMKALNSKEKDPSFY 229



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 6/162 (3%)

Query: 510 VKLDKEN--KSAYTYLGLALSSIGEYKKAEEAHLK----AIQLDRNFLEAWGHLTQFYQD 563
            K +KEN  +  Y Y      S G Y    +  +K    AI+L+ +F+ A+ +  + Y++
Sbjct: 9   FKWEKENLQRKKYEYDAEKFFSNGYYSSNSKEKMKFYTIAIKLNPSFVNAYFNRAELYKE 68

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L    KA+E   ++L +D +    Y+ R ++ + +  + KA+KDL   + +D       +
Sbjct: 69  LEKYNKAIEDYNKILELDPKDKDCYNNRAIVYYLIKDYNKALKDLDKLVSMDKHYKNIYF 128

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            R   +  I +Y+ A  ++  A+  +    E +  +  A+Y 
Sbjct: 129 NRGMIFLGIADYKRAAIEFTKAIHEDSKDSEAYENRAFAYYN 170



 Score = 40.0 bits (92), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 41/104 (39%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+  +    Y  A   F + + ED    EA   R  A    ++   +I D+T AI+ 
Sbjct: 128 FNRGMIFLGIADYKRAAIEFTKAIHEDSKDSEAYENRAFAYYNLKKYSPSIKDYTNAIKL 187

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            P     +  RG     +    +AI D  KAL  +       HE
Sbjct: 188 TPENKNIYLNRGTIYYKIKNYEKAISDYMKALNSKEKDPSFYHE 231


>gi|330508318|ref|YP_004384746.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
 gi|328929126|gb|AEB68928.1| TPR-repeat protein [Methanosaeta concilii GP6]
          Length = 485

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 150/324 (46%), Gaps = 10/324 (3%)

Query: 357 ETSNEAKRNKKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKED 411
           E  +E  RN  F +     +KSI +D       + +G A V   +Y+ A+  +++ ++ D
Sbjct: 48  EKGDEFLRNSTFEIALDCYNKSIELDSTNASIWIKKGRALVGLNRYSEALFAYNESIRLD 107

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P    A   +G A A       +I+ F EAI   P    +W  +G + A +G   E++Q 
Sbjct: 108 PQQAMAWYSKGLALANLGLYNESIAAFDEAIVIQPEVALSWLSKGISLANMGLFNESLQA 167

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
           +  A   + N +D+   RG+V  +    + +V+      +LDK ++ A+  LGLAL S G
Sbjct: 168 MDMAASMDGNLSDVWLNRGLVLAELDRDDESVDSFRRAAQLDKSSEEAWLNLGLALMSKG 227

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
               A  A+    +L+     AW    +    L  + ++ E   +   ID   + A++ R
Sbjct: 228 NNSDALAAYENLTELNPINANAWIKKGEALLTLGRAAESSESFYRATMIDPINADAWYGR 287

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            + L   G++ ++I+  +  + ++P N +     A  +  +  Y E+++ +D A++++ D
Sbjct: 288 AMALRLSGRYNESIEAYNRTVELEPGNSDAWNGLAISHVEMERYNESLEWFDRAIEIDPD 347

Query: 652 SM-----EKFVLQCLAFYQKEIAL 670
            +     +   L  L  Y +E+A+
Sbjct: 348 EIGFQYNKALALNKLGNYSEEVAV 371



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/352 (22%), Positives = 144/352 (40%), Gaps = 31/352 (8%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           LS+GI+  N G +  ++   D     D    +  + RG   A     + ++  F  A Q 
Sbjct: 149 LSKGISLANMGLFNESLQAMDMAASMDGNLSDVWLNRGLVLAELDRDDESVDSFRRAAQL 208

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           + S+ EAW   G A  + G + +A+       E  P +A+   ++G           + E
Sbjct: 209 DKSSEEAWLNLGLALMSKGNNSDALAAYENLTELNPINANAWIKKGEALLTLGRAAESSE 268

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                  +D  N  A+    +AL   G Y ++ EA+ + ++L+    +AW  L   + ++
Sbjct: 269 SFYRATMIDPINADAWYGRAMALRLSGRYNESIEAYNRTVELEPGNSDAWNGLAISHVEM 328

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               ++LE   + + ID       + + L L+ LG + + +  L+  +   P   +C   
Sbjct: 329 ERYNESLEWFDRAIEIDPDEIGFQYNKALALNKLGNYSEEVAVLNRTVEQHP---DC--- 382

Query: 625 RASCYHAIG-------EYREAIKDYDAALDLELDSMEKF----VLQCLAFYQKEIALYTA 673
            A C++ +G       +Y  AI+ YD A++L    ME +    +   L +     AL + 
Sbjct: 383 -AVCWNNLGLALARLEQYDSAIEAYDRAVELNSSYMEPWNNRGIAMVLGYEDVAGALQS- 440

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKL 725
                    FD    IDP   E W  +    N  +   R P  +++ +K K+
Sbjct: 441 ---------FDRAIQIDPRSVEAWVNK---ANALDMADRGPEAQEAREKAKM 480


>gi|255528197|ref|ZP_05395020.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
           P7]
 gi|296184633|ref|ZP_06853044.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
 gi|255508112|gb|EET84529.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
           P7]
 gi|296050415|gb|EFG89838.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
          Length = 698

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 123/255 (48%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G    A+ +++  ++ +P   E      TA      +E AI ++ ++I+ NP   EA+  
Sbjct: 434 GLLGEAMQVYETAIRFNPNNSELYCNLATALQKSNNIEDAIKNYEKSIELNPKLAEAYNN 493

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            G     L +  +A   + KA++ + N A      G V F    ++ +V+     +KLD 
Sbjct: 494 LGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGNVLFSLGRYSESVQAYKKYIKLDN 553

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            N   Y  LG AL  + E+KKA + +LK+I+++ N+  +  +L   +    N  +A++  
Sbjct: 554 SNFEVYFKLGNALYELKEFKKAIDMYLKSIEINSNYTHSNFNLANTFYTTNNINEAIKYY 613

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++V+ ID  + +AY+  G +   L  +KKA       +  +P+     Y  A+  + +GE
Sbjct: 614 EKVISIDPLYIEAYNNLGTMFCALKDYKKAKGCYQIAIKNNPNFALGYYSLATTQYMLGE 673

Query: 635 YREAIKDYDAALDLE 649
             EA K+ + A+ L+
Sbjct: 674 KEEADKNNEIAISLD 688



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 136/306 (44%), Gaps = 21/306 (6%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           +  A+ I ++I+  DP    A       +   R  + A   +  AI  NP+ G+A+   G
Sbjct: 334 FKEALDIIEKIIVIDPNDYNAYKMIANIQVNMRNYDIAEKQYKNAININPNYGDAYNDYG 393

Query: 457 QARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFKDFNAAVEDLSAC 509
                L    E+ +   KA++  P       N A+ L+E G++         A++     
Sbjct: 394 VLLYKLKRYEESKELCKKAIDLNPYECIYYNNLANSLNELGLLG-------EAMQVYETA 446

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           ++ +  N   Y  L  AL      + A + + K+I+L+    EA+ +L   Y +L + +K
Sbjct: 447 IRFNPNNSELYCNLATALQKSNNIEDAIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKK 506

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A   +++ + IDK  ++A+   G +L  LG++ ++++     + +D SN E        Y
Sbjct: 507 ATNYIKKAIKIDKNLAQAFFNLGNVLFSLGRYSESVQAYKKYIKLDNSNFEV-------Y 559

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDI 689
             +G     +K++  A+D+ L S+E       + +      YT + IN    +++    I
Sbjct: 560 FKLGNALYELKEFKKAIDMYLKSIEINSNYTHSNFNLANTFYTTNNINEAIKYYEKVISI 619

Query: 690 DPLFKE 695
           DPL+ E
Sbjct: 620 DPLYIE 625



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 116/270 (42%), Gaps = 2/270 (0%)

Query: 382 DFRLSRGIA--QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           D+   + IA  QVN   Y  A   +   +  +P Y +A    G      +  E +     
Sbjct: 351 DYNAYKMIANIQVNMRNYDIAEKQYKNAININPNYGDAYNDYGVLLYKLKRYEESKELCK 410

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI  NP     +     +   LG   EA+Q    A+ F PN++++         K  + 
Sbjct: 411 KAIDLNPYECIYYNNLANSLNELGLLGEAMQVYETAIRFNPNNSELYCNLATALQKSNNI 470

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+++    ++L+ +   AY  LG     + +YKKA     KAI++D+N  +A+ +L  
Sbjct: 471 EDAIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGN 530

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
               L    ++++  ++ + +D    + Y   G  L+ L + KKAI      + I+ +  
Sbjct: 531 VLFSLGRYSESVQAYKKYIKLDNSNFEVYFKLGNALYELKEFKKAIDMYLKSIEINSNYT 590

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLE 649
              +  A+ ++      EAIK Y+  + ++
Sbjct: 591 HSNFNLANTFYTTNNINEAIKYYEKVISID 620



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 124/282 (43%), Gaps = 9/282 (3%)

Query: 409 KEDPMYPE---ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
           KE  +YPE   A  G         E + A+    + I  +P+   A+K     +  +   
Sbjct: 309 KEIELYPESVNAYYGLALLYEELEEFKEALDIIEKIIVIDPNDYNAYKMIANIQVNMRNY 368

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
             A +    A+   PN  D  ++ G++ +K K +  + E     + L+      Y  L  
Sbjct: 369 DIAEKQYKNAININPNYGDAYNDYGVLLYKLKRYEESKELCKKAIDLNPYECIYYNNLAN 428

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           +L+ +G   +A + +  AI+ + N  E + +L    Q   N E A++  ++ + ++ + +
Sbjct: 429 SLNELGLLGEAMQVYETAIRFNPNNSELYCNLATALQKSNNIEDAIKNYEKSIELNPKLA 488

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           +AY+  G +   L  +KKA   +   + ID +  +  +   +   ++G Y E+++ Y   
Sbjct: 489 EAYNNLGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGNVLFSLGRYSESVQAYKKY 548

Query: 646 LDLELDSMEKFV-----LQCLAFYQKEIALYTAS-KINSEFC 681
           + L+  + E +      L  L  ++K I +Y  S +INS + 
Sbjct: 549 IKLDNSNFEVYFKLGNALYELKEFKKAIDMYLKSIEINSNYT 590



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/246 (20%), Positives = 120/246 (48%), Gaps = 4/246 (1%)

Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
           + D  +++   Y E  + +G     +++ ++A  ++ +AI+ + +   A+   G  +  L
Sbjct: 204 LLDLFIEKYNTYSEGYLYKGIFLYEEKKFKSAKINYLKAIELDSNNILAYYNLGNTQVIL 263

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
            E  +A +   K L+ + +  D+    G +    K ++ A +  +  ++L  E+ +AY  
Sbjct: 264 NEYEDAKKSYEKVLKLDSDHKDVHSNLGNIYSDLKLYDDAKKMYNKEIELYPESVNAYYG 323

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
           L L    + E+K+A +   K I +D N   A+  +     ++ N + A +  +  + I+ 
Sbjct: 324 LALLYEELEEFKEALDIIEKIIVIDPNDYNAYKMIANIQVNMRNYDIAEKQYKNAININP 383

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR--ASCYHAIGEYREAIK 640
            +  AY+  G+LL+ L +++++ +     + ++P   EC+Y    A+  + +G   EA++
Sbjct: 384 NYGDAYNDYGVLLYKLKRYEESKELCKKAIDLNPY--ECIYYNNLANSLNELGLLGEAMQ 441

Query: 641 DYDAAL 646
            Y+ A+
Sbjct: 442 VYETAI 447



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/222 (19%), Positives = 105/222 (47%), Gaps = 8/222 (3%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  +++ ++ +P   EA    G+      + + A +   +AI+ + +  +A+   G   
Sbjct: 473 AIKNYEKSIELNPKLAEAYNNLGSIYIELEDYKKATNYIKKAIKIDKNLAQAFFNLGNVL 532

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
            +LG   E++Q   K ++ + ++ ++  + G   ++ K+F  A++     ++++    S 
Sbjct: 533 FSLGRYSESVQAYKKYIKLDNSNFEVYFKLGNALYELKEFKKAIDMYLKSIEIN----SN 588

Query: 520 YTYLGLALS----SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           YT+    L+    +     +A + + K I +D  ++EA+ +L   +  L + +KA  C Q
Sbjct: 589 YTHSNFNLANTFYTTNNINEAIKYYEKVISIDPLYIEAYNNLGTMFCALKDYKKAKGCYQ 648

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             +  +  F+  Y+      + LG+ ++A K+    + +D S
Sbjct: 649 IAIKNNPNFALGYYSLATTQYMLGEKEEADKNNEIAISLDKS 690


>gi|374386594|ref|ZP_09644093.1| hypothetical protein HMPREF9449_02479 [Odoribacter laneus YIT
           12061]
 gi|373223767|gb|EHP46112.1| hypothetical protein HMPREF9449_02479 [Odoribacter laneus YIT
           12061]
          Length = 657

 Score = 91.3 bits (225), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 122/257 (47%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y SAI  F+ I++  P   E    RG A+    + E AI+D+T+AI  NP+   A+  RG
Sbjct: 43  YVSAIDNFNNIIRIKPYLSEPYFFRGLAKMNLDDYEGAIADYTQAIDLNPNYFYAYMYRG 102

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            A   L +  EA++D ++A+  +P+ A +   RGI   +  D+  A +D S  + +D + 
Sbjct: 103 IAYHNLRKFKEAMRDYNEAITLDPSDAYVYANRGITKAETGDYKGAEKDYSKSLMIDNKL 162

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
            +AY    +    + + + A      AI+L+    +A+G     +    +   A+E   +
Sbjct: 163 LAAYLNRAIMREKLDDPEGAMADCNAAIKLNMFSDDAFGLRGYLWYKQKDYHNAIEDYNR 222

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L  + +  K    R ++ + + +   A+KD    + ID + I   Y RA     +G+Y 
Sbjct: 223 ALKANPKNKKILMSRAIVWYEMKKFPDALKDYGEIIKIDSTYIYAYYNRAMLRAEVGDYN 282

Query: 637 EAIKDYDAALDLELDSM 653
            AI D D  ++   D++
Sbjct: 283 NAISDLDKVVETNPDNI 299



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 130/278 (46%), Gaps = 14/278 (5%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++N   Y  AI+ + Q +  +P Y  A + RG A    R+ + A+ D+ EAI  +P
Sbjct: 67  RGLAKMNLDDYEGAIADYTQAIDLNPNYFYAYMYRGIAYHNLRKFKEAMRDYNEAITLDP 126

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S    +  RG  +A  G+   A +D SK+L  +         R I+  K  D   A+ D 
Sbjct: 127 SDAYVYANRGITKAETGDYKGAEKDYSKSLMIDNKLLAAYLNRAIMREKLDDPEGAMADC 186

Query: 507 SACVKLDKENKSAYTYLGLAL-------SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           +A +KL+  +  A+   G          ++I +Y +A +A+ K  ++  +    W  + +
Sbjct: 187 NAAIKLNMFSDDAFGLRGYLWYKQKDYHNAIEDYNRALKANPKNKKILMSRAIVWYEMKK 246

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           F         AL+   +++ ID  +  AY+ R +L   +G +  AI DL   +  +P NI
Sbjct: 247 F-------PDALKDYGEIIKIDSTYIYAYYNRAMLRAEVGDYNNAISDLDKVVETNPDNI 299

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
              + R      I +Y  A +D+  ++ L  D ++ ++
Sbjct: 300 LIYFNRGLLKMEIKDYAGAYEDFSESIRLYPDFVKAYL 337



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 34/261 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI +   G Y  A   + + L  D     A + R   R    + E A++D   AI+ N
Sbjct: 134 NRGITKAETGDYKGAEKDYSKSLMIDNKLLAAYLNRAIMREKLDDPEGAMADCNAAIKLN 193

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
             + +A+  RG       +   AI+D ++AL+  P +  IL  R IV ++ K F  A++D
Sbjct: 194 MFSDDAFGLRGYLWYKQKDYHNAIEDYNRALKANPKNKKILMSRAIVWYEMKKFPDALKD 253

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+D     AY    +  + +G+Y  A                           ++
Sbjct: 254 YGEIIKIDSTYIYAYYNRAMLRAEVGDYNNA---------------------------IS 286

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + +K +E     + I       Y  RGLL   +  +  A +D S  + + P  ++    R
Sbjct: 287 DLDKVVETNPDNILI-------YFNRGLLKMEIKDYAGAYEDFSESIRLYPDFVKAYLAR 339

Query: 626 ASCYHAIGEYREAIKDYDAAL 646
           A+  +A+  Y  A +D+  AL
Sbjct: 340 AAVNNALQHYAAADEDHGRAL 360



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 14/192 (7%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           +E  I   +  I   P+A + +  RG       E  +AI+D     E EPN    L  + 
Sbjct: 467 IEENIQQLSSKITQQPTADD-YLLRGIFYMNSREYPKAIEDFMAVNELEPNHILALFNQA 525

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
               +  D+  ++ED    V++  E K         +  I +Y +  E + K +++D  F
Sbjct: 526 NARMQMLDYIESIED--NTVEVIGEEKQ--------VKRIIDYSQVLEGYRKCLEIDPAF 575

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
           + A  ++   Y      ++A+E   +V+  DK F++AY  RGLL    G+  +A  DLS 
Sbjct: 576 IFALYNIGNVYVKSEKIDQAIEAYSEVIRQDKEFAEAYFNRGLLYIYTGRKAEANADLSK 635

Query: 611 G--LG-IDPSNI 619
              LG ID  NI
Sbjct: 636 AGELGIIDAYNI 647



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 84/172 (48%)

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
           F D+ +A+++ +  +++       Y + GLA  ++ +Y+ A   + +AI L+ N+  A+ 
Sbjct: 40  FDDYVSAIDNFNNIIRIKPYLSEPYFFRGLAKMNLDDYEGAIADYTQAIDLNPNYFYAYM 99

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           +    Y +L   ++A+    + + +D   +  Y  RG+     G +K A KD S  L ID
Sbjct: 100 YRGIAYHNLRKFKEAMRDYNEAITLDPSDAYVYANRGITKAETGDYKGAEKDYSKSLMID 159

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
              +     RA     + +   A+ D +AA+ L + S + F L+   +Y+++
Sbjct: 160 NKLLAAYLNRAIMREKLDDPEGAMADCNAAIKLNMFSDDAFGLRGYLWYKQK 211



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 71/305 (23%), Positives = 118/305 (38%), Gaps = 65/305 (21%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +SR I      K+  A+  + +I+K D  Y  A   R   RA   +   AISD  + +++
Sbjct: 235 MSRAIVWYEMKKFPDALKDYGEIIKIDSTYIYAYYNRAMLRAEVGDYNNAISDLDKVVET 294

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP     +  RG  +  + +   A +D S+++   P+       R  VN   + + AA E
Sbjct: 295 NPDNILIYFNRGLLKMEIKDYAGAYEDFSESIRLYPDFVKAYLARAAVNNALQHYAAADE 354

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL----EAWGHLTQF 560
           D                  G AL+ +  Y+K +E        DRN L    E +  L  F
Sbjct: 355 D-----------------HGRALAVMDRYRKMKEG-------DRNALVDTTENFQRLIDF 390

Query: 561 ------YQDLAN----------SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH--- 601
                  +D+ N          S + + C+Q +     R  K  +    +++   QH   
Sbjct: 391 NAREDKMRDVINGRVQDKNVIVSLRDIFCVQYLSLDSLRNGKVQYYNTHIMNYNQQHNYQ 450

Query: 602 -----------------KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
                            ++ I+ LSS +   P+  + L LR   Y    EY +AI+D+ A
Sbjct: 451 PSLSLSNRKYRYPASFIEENIQQLSSKITQQPTADDYL-LRGIFYMNSREYPKAIEDFMA 509

Query: 645 ALDLE 649
             +LE
Sbjct: 510 VNELE 514



 Score = 40.4 bits (93), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 62/285 (21%), Positives = 123/285 (43%), Gaps = 17/285 (5%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I K  S  +    +R + +   G Y +AIS  D++++ +P        RG  +   ++  
Sbjct: 257 IIKIDSTYIYAYYNRAMLRAEVGDYNNAISDLDKVVETNPDNILIYFNRGLLKMEIKDYA 316

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH-ERGI 491
            A  DF+E+I+  P   +A+  R     AL     A +D  +AL        +   +R  
Sbjct: 317 GAYEDFSESIRLYPDFVKAYLARAAVNNALQHYAAADEDHGRALAVMDRYRKMKEGDRNA 376

Query: 492 V-----NF-KFKDFNAAVEDLSACVKLDKENKSAYTYLG-------LALSSIGEYK-KAE 537
           +     NF +  DFNA  + +   +    ++K+    L        L+L S+   K +  
Sbjct: 377 LVDTTENFQRLIDFNAREDKMRDVINGRVQDKNVIVSLRDIFCVQYLSLDSLRNGKVQYY 436

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANS-EKALECLQQVLYIDKRFSKAYHLRGLLLH 596
             H+       N+  +     + Y+  A+  E+ ++ L   +   +  +  Y LRG+   
Sbjct: 437 NTHIMNYNQQHNYQPSLSLSNRKYRYPASFIEENIQQLSSKI-TQQPTADDYLLRGIFYM 495

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
              ++ KAI+D  +   ++P++I  L+ +A+    + +Y E+I+D
Sbjct: 496 NSREYPKAIEDFMAVNELEPNHILALFNQANARMQMLDYIESIED 540


>gi|434395410|ref|YP_007130357.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
           PCC 7428]
 gi|428267251|gb|AFZ33197.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
           PCC 7428]
          Length = 1022

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 130/264 (49%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +++G A   EG+Y  AI+ ++Q L+  P  P+    +G A    ++ E+AI+ F + ++ 
Sbjct: 730 INQGNALFAEGRYQEAIATYEQALEIQPNNPDLCYQQGLALWELKQYESAIAAFDKVLEI 789

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    +W  RG A   L     A    S+ ++ +P ++D    RGIV  + K +  A+ 
Sbjct: 790 KPDDAASWYHRGLALKELKRYEGAFAAFSQVIQVQPENSDAWFNRGIVLSRMKRYKDAIA 849

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++++  +  A+   G+AL  +  +++A ++  +A+Q+  +   AW +     + L
Sbjct: 850 SYDKAIEINPNHHLAWVDRGVALGKLQNHEEAFQSFDRAVQVKPDDAVAWMNRAMALEVL 909

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E A+    + + +D  + KA++ +G LL  L +  +A++     L I P      Y 
Sbjct: 910 EKLEDAIASYDKAIELDPDYYKAWNAKGYLLVQLERDPEALESFDRALQIQPDYPNAYYN 969

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           +A CY   G+ + A+++   A++L
Sbjct: 970 KAICYAFQGQVKLALENLQKAIEL 993



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 109/230 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+A     +Y SAI+ FD++L+  P    +   RG A    +  E A + F++ IQ  P
Sbjct: 766 QGLALWELKQYESAIAAFDKVLEIKPDDAASWYHRGLALKELKRYEGAFAAFSQVIQVQP 825

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG   + +    +AI    KA+E  PN      +RG+   K ++   A +  
Sbjct: 826 ENSDAWFNRGIVLSRMKRYKDAIASYDKAIEINPNHHLAWVDRGVALGKLQNHEEAFQSF 885

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              V++  ++  A+    +AL  + + + A  ++ KAI+LD ++ +AW         L  
Sbjct: 886 DRAVQVKPDDAVAWMNRAMALEVLEKLEDAIASYDKAIELDPDYYKAWNAKGYLLVQLER 945

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
             +ALE   + L I   +  AY+ + +     GQ K A+++L   + ++P
Sbjct: 946 DPEALESFDRALQIQPDYPNAYYNKAICYAFQGQVKLALENLQKAIELNP 995



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 156/337 (46%), Gaps = 30/337 (8%)

Query: 327 SYSKSSISDNKSSDSTESRSKLSFKW-DMLKETSNEAKRNKKFCVTRISKSKSISVDFRL 385
           S S+S +   +++ + E+  KL+ +W + L    +E    K+  +  + K     ++ RL
Sbjct: 610 SDSQSGVQSQQNA-TIENLEKLASEWSNQLAALQSEITNRKELTLENLDK-----LENRL 663

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
              +A+V     A    I  Q+ +  P      I +       ++++A +S+  E +++N
Sbjct: 664 ETELAEVKSDAQARKEQILRQLAEIAPTS----IAQAALADVSQQIQA-LSEQLELLKTN 718

Query: 446 -PSA---GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
            P      + +  +G A  A G   EAI    +ALE +PN+ D+ +++G+  ++ K + +
Sbjct: 719 YPQLFMRPDDYINQGNALFAEGRYQEAIATYEQALEIQPNNPDLCYQQGLALWELKQYES 778

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW------- 554
           A+      +++  ++ +++ + GLAL  +  Y+ A  A  + IQ+     +AW       
Sbjct: 779 AIAAFDKVLEIKPDDAASWYHRGLALKELKRYEGAFAAFSQVIQVQPENSDAWFNRGIVL 838

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             + ++   +A+ +KA+E       I+     A+  RG+ L  L  H++A +     + +
Sbjct: 839 SRMKRYKDAIASYDKAIE-------INPNHHLAWVDRGVALGKLQNHEEAFQSFDRAVQV 891

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            P +      RA     + +  +AI  YD A++L+ D
Sbjct: 892 KPDDAVAWMNRAMALEVLEKLEDAIASYDKAIELDPD 928



 Score = 53.1 bits (126), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 76/166 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RGI      +Y  AI+ +D+ ++ +P +  A + RG A    +  E A   F  A+Q 
Sbjct: 832 FNRGIVLSRMKRYKDAIASYDKAIEINPNHHLAWVDRGVALGKLQNHEEAFQSFDRAVQV 891

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    AW  R  A   L +  +AI    KA+E +P+     + +G +  + +    A+E
Sbjct: 892 KPDDAVAWMNRAMALEVLEKLEDAIASYDKAIELDPDYYKAWNAKGYLLVQLERDPEALE 951

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
                +++  +  +AY    +  +  G+ K A E   KAI+L+  +
Sbjct: 952 SFDRALQIQPDYPNAYYNKAICYAFQGQVKLALENLQKAIELNPKY 997


>gi|307152887|ref|YP_003888271.1| hypothetical protein Cyan7822_3041 [Cyanothece sp. PCC 7822]
 gi|306983115|gb|ADN14996.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 237

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 57/169 (33%), Positives = 85/169 (50%), Gaps = 1/169 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           SVD+ + +G+     G Y  A+  F++ LK DP   +A   RG   ++ ++   A+ DF 
Sbjct: 51  SVDW-VEQGVNNTQAGNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDFQ 109

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +A+Q  P   EA+  RG     LGE  +AI D + AL+F PN A   +  G+      + 
Sbjct: 110 KALQLEPDLVEAYINRGNVYLELGEYQKAIADYTAALKFNPNEAFAHNNIGLAYLNLGEP 169

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
             A  +L+  V+LD     AY   GLA S +G+ +KA     KA QL R
Sbjct: 170 VRATLELTKAVELDPNYGEAYYNRGLAFSDVGDQQKARSDFQKAAQLWR 218



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/157 (28%), Positives = 78/157 (49%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W  +G      G   +A+++ +KAL+ +PN+ D  + RG V    KDF  A+ED    ++
Sbjct: 54  WVEQGVNNTQAGNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDFQKALQ 113

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           L+ +   AY   G     +GEY+KA   +  A++ + N   A  ++   Y +L    +A 
Sbjct: 114 LEPDLVEAYINRGNVYLELGEYQKAIADYTAALKFNPNEAFAHNNIGLAYLNLGEPVRAT 173

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             L + + +D  + +AY+ RGL    +G  +KA  D 
Sbjct: 174 LELTKAVELDPNYGEAYYNRGLAFSDVGDQQKARSDF 210



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/145 (27%), Positives = 80/145 (55%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + A+ +F +A++ +P+  +A+  RG   + L +  +A++D  KAL+ EP+  +    RG 
Sbjct: 68  QQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDFQKALQLEPDLVEAYINRGN 127

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           V  +  ++  A+ D +A +K +     A+  +GLA  ++GE  +A     KA++LD N+ 
Sbjct: 128 VYLELGEYQKAIADYTAALKFNPNEAFAHNNIGLAYLNLGEPVRATLELTKAVELDPNYG 187

Query: 552 EAWGHLTQFYQDLANSEKALECLQQ 576
           EA+ +    + D+ + +KA    Q+
Sbjct: 188 EAYYNRGLAFSDVGDQQKARSDFQK 212



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/175 (28%), Positives = 89/175 (50%), Gaps = 2/175 (1%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           NS D + E+G+ N +  ++  A+E+ +  +KLD  N  AY   G   S + ++ KA E  
Sbjct: 50  NSVDWV-EQGVNNTQAGNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDF 108

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            KA+QL+ + +EA+ +    Y +L   +KA+      L  +   + A++  GL    LG+
Sbjct: 109 QKALQLEPDLVEAYINRGNVYLELGEYQKAIADYTAALKFNPNEAFAHNNIGLAYLNLGE 168

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL-ELDSME 654
             +A  +L+  + +DP+  E  Y R   +  +G+ ++A  D+  A  L  LD  E
Sbjct: 169 PVRATLELTKAVELDPNYGEAYYNRGLAFSDVGDQQKARSDFQKAAQLWRLDGNE 223



 Score = 52.0 bits (123), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 5/81 (6%)

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
           G +++A+++ +  L +DP+N++  Y R   Y  + ++ +A++D+  AL LE D +E ++ 
Sbjct: 65  GNYQQALENFNKALKLDPNNVDAYYNRGFVYSYLKDFPKALEDFQKALQLEPDLVEAYIN 124

Query: 659 QC-----LAFYQKEIALYTAS 674
           +      L  YQK IA YTA+
Sbjct: 125 RGNVYLELGEYQKAIADYTAA 145



 Score = 46.2 bits (108), Expect = 0.087,   Method: Composition-based stats.
 Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 6/77 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +L N++KA++ LD     +Y      NR F YS L+     + D  KALQL+P L++AYI
Sbjct: 70  ALENFNKALK-LDPNNVDAYY-----NRGFVYSYLKDFPKALEDFQKALQLEPDLVEAYI 123

Query: 108 LKGCAFSALGRKEEALS 124
            +G  +  LG  ++A++
Sbjct: 124 NRGNVYLELGEYQKAIA 140


>gi|296448615|ref|ZP_06890484.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
 gi|296253865|gb|EFH01023.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
          Length = 285

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 64/197 (32%), Positives = 90/197 (45%), Gaps = 2/197 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQS 444
           +RG+A    G++  AI+ F Q ++ DP    A   R  A R   R  +A + DF  AI  
Sbjct: 78  TRGVAHAKVGQFQEAIADFSQAIQSDPNSAAAFTNRALAFRQIGRSDQARL-DFDRAITV 136

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+   A+  R     A G   EA+ DL  A+   P SA   H RG+++ K  D   AV 
Sbjct: 137 SPNHAPAYIGRANLLRAQGNLDEALIDLDAAIRLNPESAQAFHARGLIHQKRGDNLRAVT 196

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    +  D    + Y   G +L ++G+Y KA E    A+ +D     AW  L   Y   
Sbjct: 197 DFDNAIDRDPFAAAPYQARGESLVALGKYDKAIEDFNAALNVDNKSAPAWAWLGLAYDRQ 256

Query: 565 ANSEKALECLQQVLYID 581
            N  KA E  Q+ L ID
Sbjct: 257 GNRAKAAESYQRALSID 273



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 57/212 (26%), Positives = 102/212 (48%), Gaps = 4/212 (1%)

Query: 455 RGQARAALGESVEA---IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           RG A   +G+   A   I+ LS+ +   P SA+  + RG+ + K   F  A+ D S  ++
Sbjct: 43  RGFAETEVGDPKAASANIESLSEVIRRNP-SAEAFNTRGVAHAKVGQFQEAIADFSQAIQ 101

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
            D  + +A+T   LA   IG   +A     +AI +  N   A+       +   N ++AL
Sbjct: 102 SDPNSAAAFTNRALAFRQIGRSDQARLDFDRAITVSPNHAPAYIGRANLLRAQGNLDEAL 161

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
             L   + ++   ++A+H RGL+    G + +A+ D  + +  DP        R     A
Sbjct: 162 IDLDAAIRLNPESAQAFHARGLIHQKRGDNLRAVTDFDNAIDRDPFAAAPYQARGESLVA 221

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           +G+Y +AI+D++AAL+++  S   +    LA+
Sbjct: 222 LGKYDKAIEDFNAALNVDNKSAPAWAWLGLAY 253



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/164 (28%), Positives = 82/164 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +A    G+   A   FD+ +   P +  A IGR      Q  L+ A+ D   AI+ N
Sbjct: 112 NRALAFRQIGRSDQARLDFDRAITVSPNHAPAYIGRANLLRAQGNLDEALIDLDAAIRLN 171

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P + +A+  RG      G+++ A+ D   A++ +P +A     RG        ++ A+ED
Sbjct: 172 PESAQAFHARGLIHQKRGDNLRAVTDFDNAIDRDPFAAAPYQARGESLVALGKYDKAIED 231

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            +A + +D ++  A+ +LGLA    G   KA E++ +A+ +D N
Sbjct: 232 FNAALNVDNKSAPAWAWLGLAYDRQGNRAKAAESYQRALSIDPN 275


>gi|254166562|ref|ZP_04873416.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|289596148|ref|YP_003482844.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
 gi|197624172|gb|EDY36733.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|289533935|gb|ADD08282.1| TPR repeat-containing protein [Aciduliprofundum boonei T469]
          Length = 1297

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 14/295 (4%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++ G+A    G    A+  +    K DP    A        A Q+E + A     +A+Q 
Sbjct: 65  VNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQI 124

Query: 445 NPSAGEAWKRRGQARAALGESVEA--------------IQDLSKALEFEPNSADILHERG 490
           +  + E W+ + +     G+  EA              I+   K LE+ P   +IL ++G
Sbjct: 125 DRRSKEVWETKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEILFKKG 184

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +  +K + +   V+ +   V ++ E++ A+ YLG A ++I   ++A  A  KAI++D N 
Sbjct: 185 VQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPND 244

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            ++W +L   Y+     E+AL+C ++ + ID    K+++L   +LH L +  +A+K ++ 
Sbjct: 245 KKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINR 304

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            L +D      L LR      +  Y E        LD+  +  E      L++Y 
Sbjct: 305 ALELDKKYESALLLRRDVAKKLKVYDELAAACVGLLDVGYEDTELMYDLALSYYH 359



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 135/309 (43%), Gaps = 36/309 (11%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
            +L + I +  +G++   ISI + ILK +P    +L+    A     +LE+A++    A 
Sbjct: 384 LKLQKEIMK-KKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRAT 442

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQ----------------DLSKA----------- 475
           +  PS  E WK R      L +  E I                 DL++A           
Sbjct: 443 EIEPSNIELWKLRKDIAKDLNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAK 502

Query: 476 ------LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
                 L+   +S +  +  G++ +K  D   A         ++  NK  +  L   +  
Sbjct: 503 KTLERGLKLNEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPNNKKYWKNLAWVMEK 562

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +G+Y +A E + KA++LD N +  W       + +   E+A++     L ++  F+KA +
Sbjct: 563 LGKYNEAVEYYEKALKLDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALY 622

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            +G  L  LG + +A+K  +S + ++  N E +Y RA       EY  A+KD + AL+ E
Sbjct: 623 EKGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYE 682

Query: 650 LDSMEKFVL 658
               EKF++
Sbjct: 683 --RKEKFLV 689



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 40/290 (13%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  A+  +++ LK DP        +G      +  E AI  F  A++ N    +A   
Sbjct: 564 GKYNEAVEYYEKALKLDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALYE 623

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G +   LG   EA++  +  ++ E  +++ +++R  + FK +++ AA++DL+  +  ++
Sbjct: 624 KGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYER 683

Query: 515 ENKSAYTYLGLALSSIGEYKKAE---EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           + K    +L L      E K  E   E   + + +++  + AW  L   Y  +   + A+
Sbjct: 684 KEK----FLVLKKDVCKELKDYECVIETSKEILTINKKNISAWRDLAVAYDSMGKVDSAI 739

Query: 572 ECLQQVLYI-----------------DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL-- 612
              +  L I                   RF+ A  +   +L    +    ++DLSS L  
Sbjct: 740 ATYRDALEIFPDNDVLLYELKATLLKHNRFADAIDVCKKILSIAPEDYDNLRDLSSALIK 799

Query: 613 -------------GIDPS-NIECLYLRASCYHAIGEYREAIKDYDAALDL 648
                         ++ + N E L L    Y+ +  Y  AI+ Y  AL+L
Sbjct: 800 LKKYEDAKEYLLRALELNKNAELLELLGDTYYYLKNYTSAIEHYKDALNL 849



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 135/319 (42%), Gaps = 37/319 (11%)

Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           D RL   +GI      +Y  AI  FD  LK +  + +AL  +G +       + A+  FT
Sbjct: 583 DMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDSLIKLGNYDEALKIFT 642

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
             I+      E   +R   R    E   A++DL+ AL +E     ++ ++ +   + KD+
Sbjct: 643 SLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYERKEKFLVLKKDVCK-ELKDY 701

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGE-------YKKAEEA---------HLKA 543
              +E     + ++K+N SA+  L +A  S+G+       Y+ A E           LKA
Sbjct: 702 ECVIETSKEILTINKKNISAWRDLAVAYDSMGKVDSAIATYRDALEIFPDNDVLLYELKA 761

Query: 544 IQLDRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF--SKAYHLRGL------- 593
             L  N F +A     +           L  L   L   K++  +K Y LR L       
Sbjct: 762 TLLKHNRFADAIDVCKKILSIAPEDYDNLRDLSSALIKLKKYEDAKEYLLRALELNKNAE 821

Query: 594 LLHGLGQHKKAIKDLSSGLG--IDPSNIEC---LYLR-ASCYHAIGEYREAIKDYDAALD 647
           LL  LG     +K+ +S +    D  N+     +Y + A  Y+ +G+ +EAIK  + A++
Sbjct: 822 LLELLGDTYYYLKNYTSAIEHYKDALNLNASPHIYHKLAKAYYKVGDLQEAIKSIERAIE 881

Query: 648 LELDSMEKFVLQCLAFYQK 666
            + D+  KF L     Y K
Sbjct: 882 WKKDA--KFYLLGSRIYLK 898



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 22/212 (10%)

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I  N   G+ + RR  +   + E++E I++     E E  SA +L   G+   K      
Sbjct: 28  INKNNPEGKDYLRR--SINLINENLELIKN-----ENESFSA-LLVNTGMALQKVGAIKD 79

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+E      KLD  N SAYT   + L+   EYKKA     KA+Q+DR   E W    + Y
Sbjct: 80  ALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQIDRRSKEVWETKAEIY 139

Query: 562 QDLANSEKALECLQQVL--------YIDKRFS------KAYHLRGLLLHGLGQHKKAIKD 607
           Q   + ++AL+  ++++        Y DK         +    +G+ L+ +  + + +K 
Sbjct: 140 QLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEILFKKGVQLYKIQSYAECVKI 199

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           +   + I+  + E      + Y  I   REAI
Sbjct: 200 MKKVVSINAEHQEAWVYLGAAYANIDRMREAI 231



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 60/286 (20%), Positives = 118/286 (41%), Gaps = 5/286 (1%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
           ++K   +E K   K+   R    K + + F+  +G+       YA  + I  +++  +  
Sbjct: 155 LIKMYPDEIKYYDKYLEYR---PKDLEILFK--KGVQLYKIQSYAECVKIMKKVVSINAE 209

Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
           + EA +  G A A    +  AI+   +AI+ +P+  ++W   G      GE  EA++   
Sbjct: 210 HQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFK 269

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           +A++ +PN     +    V    +  + A++ ++  ++LDK+ +SA          +  Y
Sbjct: 270 EAIKIDPNDKKSWYLEASVLHILERDSEALKSINRALELDKKYESALLLRRDVAKKLKVY 329

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
            +   A +  + +     E    L   Y      EKA      +L    R      L+  
Sbjct: 330 DELAAACVGLLDVGYEDTELMYDLALSYYHTGELEKAYNITLDILKSLPRHLPTLKLQKE 389

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           ++   GQ ++ I      L I+P++I  L   A  Y  +G+   A+
Sbjct: 390 IMKKKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESAL 435



 Score = 46.2 bits (108), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 145/385 (37%), Gaps = 83/385 (21%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
           CV  + K  SI+ + +   +  G A  N  +   AI+   + +K DP   ++ I  G   
Sbjct: 196 CVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILY 255

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
             + E E A+  F EAI+ +P+  ++W         L    EA++ +++ALE +      
Sbjct: 256 KKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINRALELDKKYESA 315

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKL---DKENKSAYTYLGLALSSIGEYKKAEEA--- 539
           L  R  V  K K ++   E  +ACV L     E+      L L+    GE +KA      
Sbjct: 316 LLLRRDVAKKLKVYD---ELAAACVGLLDVGYEDTELMYDLALSYYHTGELEKAYNITLD 372

Query: 540 -------HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR-------FS 585
                  HL  ++L +  ++  G            E+ +   + +L I+          +
Sbjct: 373 ILKSLPRHLPTLKLQKEIMKKKGQW----------ERVISICEDILKIEPNDIGSLVDEA 422

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR-------------------- 625
           KAY   G L   L    +A +       I+PSNIE   LR                    
Sbjct: 423 KAYREVGKLESALNFAIRATE-------IEPSNIELWKLRKDIAKDLNKPQEIINAGTQI 475

Query: 626 -------------ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYT 672
                        A  Y+ +  Y +A K  +  L L  DS E + L  + +Y+       
Sbjct: 476 ISMEGDFETYLDLARAYYIVSRYDDAKKTLERGLKLNEDSDEGWNLLGMIYYK------L 529

Query: 673 ASKINSEFCWFDIDGDIDPLFKEYW 697
               N+ +  F+    I+P  K+YW
Sbjct: 530 GDLENARYS-FEKASTINPNNKKYW 553


>gi|384214436|ref|YP_005605599.1| hypothetical protein BJ6T_07170 [Bradyrhizobium japonicum USDA 6]
 gi|354953332|dbj|BAL06011.1| hypothetical protein BJ6T_07170 [Bradyrhizobium japonicum USDA 6]
          Length = 370

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 147/320 (45%), Gaps = 38/320 (11%)

Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
           KR+K       S +  I  +F  +   RG A   +G+   A++ +++ ++ DP Y  +  
Sbjct: 62  KRDKDRAFEDCSAAIRIDPNFGRAYNCRGRAYSAKGERDRALADYNEAIRLDPGYGPSYT 121

Query: 420 GRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
            R      +R+ + AI+ FTEA++ NP  A  A   RG+A AA G++  A+ D  +A+  
Sbjct: 122 SRALEYFNKRDFDLAITAFTEAVERNPKQAYFAIVMRGEAYAAKGDTDRAVADYDEAMRR 181

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
            P++A     R   +F+  +F+AA++D ++ V+L+ +            S+ G Y +A  
Sbjct: 182 NPSAAWPYELRSTAHFEKGEFDAALDDCNSAVRLEPK------------SAGGHYCRA-- 227

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
                + L ++                +++ A+    +V  I   F KAY  R +  H  
Sbjct: 228 ----VVLLKKD----------------DADGAIREFDEVTRIAPAFVKAYLARAVAWHKK 267

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
           G  K AI D    + + P N      RA+ +  +GE+  A+ DY+ A+ L+ ++    V 
Sbjct: 268 GDDKHAIADFDEAIRLQPGNSTAYNNRAAAFRDMGEHDRALADYNEAIRLDPNNQVALVN 327

Query: 659 QCLAFYQKEIALYTASKINS 678
           + L + +   A +  +  NS
Sbjct: 328 RGLLYMKLSDAKHARADFNS 347



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 1/234 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQS 444
           SR +   N+  +  AI+ F + ++ +P     A++ RG A A + + + A++D+ EA++ 
Sbjct: 122 SRALEYFNKRDFDLAITAFTEAVERNPKQAYFAIVMRGEAYAAKGDTDRAVADYDEAMRR 181

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NPSA   ++ R  A    GE   A+ D + A+  EP SA   + R +V  K  D + A+ 
Sbjct: 182 NPSAAWPYELRSTAHFEKGEFDAALDDCNSAVRLEPKSAGGHYCRAVVLLKKDDADGAIR 241

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           +     ++      AY    +A    G+ K A     +AI+L      A+ +    ++D+
Sbjct: 242 EFDEVTRIAPAFVKAYLARAVAWHKKGDDKHAIADFDEAIRLQPGNSTAYNNRAAAFRDM 301

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
              ++AL    + + +D     A   RGLL   L   K A  D +S L + P +
Sbjct: 302 GEHDRALADYNEAIRLDPNNQVALVNRGLLYMKLSDAKHARADFNSVLALPPGD 355



 Score = 50.1 bits (118), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 49/235 (20%), Positives = 108/235 (45%), Gaps = 5/235 (2%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS+ TE I ++P+   A++ RG+A     +   A +D S A+  +PN     + RG    
Sbjct: 35  ISEKTEIIAADPTNAVAYELRGEAWHLKRDKDRAFEDCSAAIRIDPNFGRAYNCRGRAYS 94

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              + + A+ D +  ++LD     +YT   L   +  ++  A  A  +A++  RN  +A+
Sbjct: 95  AKGERDRALADYNEAIRLDPGYGPSYTSRALEYFNKRDFDLAITAFTEAVE--RNPKQAY 152

Query: 555 GHLT---QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
             +    + Y    ++++A+    + +  +   +  Y LR       G+   A+ D +S 
Sbjct: 153 FAIVMRGEAYAAKGDTDRAVADYDEAMRRNPSAAWPYELRSTAHFEKGEFDAALDDCNSA 212

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           + ++P +    Y RA       +   AI+++D    +    ++ ++ + +A+++K
Sbjct: 213 VRLEPKSAGGHYCRAVVLLKKDDADGAIREFDEVTRIAPAFVKAYLARAVAWHKK 267



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 49/106 (46%)

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           + D  ++++ +    +++  D   + AY LRG   H      +A +D S+ + IDP+   
Sbjct: 25  HADDTSNDRVISEKTEIIAADPTNAVAYELRGEAWHLKRDKDRAFEDCSAAIRIDPNFGR 84

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
               R   Y A GE   A+ DY+ A+ L+      +  + L ++ K
Sbjct: 85  AYNCRGRAYSAKGERDRALADYNEAIRLDPGYGPSYTSRALEYFNK 130


>gi|37520776|ref|NP_924153.1| hypothetical protein glr1207 [Gloeobacter violaceus PCC 7421]
 gi|35211771|dbj|BAC89148.1| glr1207 [Gloeobacter violaceus PCC 7421]
          Length = 535

 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 2/272 (0%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN-PSAGEA 451
             G+YA+A+   D++++ +  +P A   RG A+   +E  AA +DF+ AI  N P+    
Sbjct: 218 QRGEYAAAVETLDRVIELNKSHPLAHANRGLAKLKLKEYRAAAADFSRAITLNAPAPAML 277

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
              R  A A L +   A+ DL +A+  +P  A     RG+V  +  DF  A+ D    + 
Sbjct: 278 RLNRAVALAELRDHPAALTDLGEAIRLDPKLAAAHGNRGLVRTRSGDFKGAIADFDRQLA 337

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           LD  +  AY     A +  G+ + A     +A+ L  +   A     + +  L   ++A+
Sbjct: 338 LDPSSADAYIGRADARTRSGDLQGALADFDRAVDLSPSSF-ALRSRAELHVRLKAYKEAI 396

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               +V+ ++ +   AY  RG    GL   + A+ D    L +D +     Y R      
Sbjct: 397 ADYDRVIALEPKLPTAYVGRGNARLGLQDTQGALADYDQALALDSAFGRAYYNRGLANFR 456

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           +  YR+A+ D+D ALD   DS   F+ + LA 
Sbjct: 457 LRSYRKAVNDFDRALDHNFDSAPVFLNRGLAL 488



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 1/245 (0%)

Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
           ++L++D  +  A   R  AR    +L+  ++D  +AI+  P+  EA+  RG+  A  G +
Sbjct: 61  RMLRQDAAFEPAYRWRAQARLRLGDLKGGLADAEQAIRLVPTNAEAYLLRGELHATAGTA 120

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
             A  D  +A++  P+ A+ L  R +  +   D + A+  L   V LD   + AY   GL
Sbjct: 121 AAARADYLQAVQASPDDAEGLRVRAMAQYALGDGDGALMHLDRAVVLDARKERAYLQRGL 180

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
             +  G+ + A   +L+A+ L  +++ A   L    Q       A+E L +V+ ++K   
Sbjct: 181 LRAQRGDREGARADYLRAVVLAHDYVPAHLQLAALAQQRGEYAAAVETLDRVIELNKSHP 240

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDYDA 644
            A+  RGL    L +++ A  D S  + ++      L L RA     + ++  A+ D   
Sbjct: 241 LAHANRGLAKLKLKEYRAAAADFSRAITLNAPAPAMLRLNRAVALAELRDHPAALTDLGE 300

Query: 645 ALDLE 649
           A+ L+
Sbjct: 301 AIRLD 305



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 138/331 (41%), Gaps = 48/331 (14%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R  A++  G     ++  +Q ++  P   EA + RG   A      AA +D+ +A+Q++P
Sbjct: 76  RAQARLRLGDLKGGLADAEQAIRLVPTNAEAYLLRGELHATAGTAAAARADYLQAVQASP 135

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD-------- 498
              E  + R  A+ ALG+   A+  L +A+  +        +RG++  +  D        
Sbjct: 136 DDAEGLRVRAMAQYALGDGDGALMHLDRAVVLDARKERAYLQRGLLRAQRGDREGARADY 195

Query: 499 --------------------------FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
                                     + AAVE L   ++L+K +  A+   GLA   + E
Sbjct: 196 LRAVVLAHDYVPAHLQLAALAQQRGEYAAAVETLDRVIELNKSHPLAHANRGLAKLKLKE 255

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQF--YQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           Y+ A     +AI L+     A   L +     +L +   AL  L + + +D + + A+  
Sbjct: 256 YRAAAADFSRAITLNAP-APAMLRLNRAVALAELRDHPAALTDLGEAIRLDPKLAAAHGN 314

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL-- 648
           RGL+    G  K AI D    L +DPS+ +    RA      G+ + A+ D+D A+DL  
Sbjct: 315 RGLVRTRSGDFKGAIADFDRQLALDPSSADAYIGRADARTRSGDLQGALADFDRAVDLSP 374

Query: 649 ---------ELDSMEKFVLQCLAFYQKEIAL 670
                    EL    K   + +A Y + IAL
Sbjct: 375 SSFALRSRAELHVRLKAYKEAIADYDRVIAL 405



 Score = 68.9 bits (167), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 38/195 (19%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            ++I +D +L+     RG+ +   G +  AI+ FD+ L  DP   +A IGR  AR    +
Sbjct: 299 GEAIRLDPKLAAAHGNRGLVRTRSGDFKGAIADFDRQLALDPSSADAYIGRADARTRSGD 358

Query: 431 LEAAISDFTEAIQSNPSA---------------------------------GEAWKRRGQ 457
           L+ A++DF  A+  +PS+                                   A+  RG 
Sbjct: 359 LQGALADFDRAVDLSPSSFALRSRAELHVRLKAYKEAIADYDRVIALEPKLPTAYVGRGN 418

Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
           AR  L ++  A+ D  +AL  +       + RG+ NF+ + +  AV D    +  + ++ 
Sbjct: 419 ARLGLQDTQGALADYDQALALDSAFGRAYYNRGLANFRLRSYRKAVNDFDRALDHNFDSA 478

Query: 518 SAYTYLGLALSSIGE 532
             +   GLAL+ +GE
Sbjct: 479 PVFLNRGLALAGLGE 493



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 122/308 (39%), Gaps = 49/308 (15%)

Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDF--------------RLSRGIAQVNEGKYASA 400
           L ++   A  N+     ++ + ++ + DF              RL+R +A      + +A
Sbjct: 235 LNKSHPLAHANRGLAKLKLKEYRAAAADFSRAITLNAPAPAMLRLNRAVALAELRDHPAA 294

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           ++   + ++ DP    A   RG  R    + + AI+DF   +  +PS+ +A+  R  AR 
Sbjct: 295 LTDLGEAIRLDPKLAAAHGNRGLVRTRSGDFKGAIADFDRQLALDPSSADAYIGRADART 354

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
             G+   A+ D  +A++  P+S   L  R  ++ + K +  A+ D    + L  E K   
Sbjct: 355 RSGDLQGALADFDRAVDLSPSSF-ALRSRAELHVRLKAYKEAIADYDRVIAL--EPKLPT 411

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
            Y+G   + +G                                L +++ AL    Q L +
Sbjct: 412 AYVGRGNARLG--------------------------------LQDTQGALADYDQALAL 439

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           D  F +AY+ RGL    L  ++KA+ D    L  +  +      R      +GE   A+ 
Sbjct: 440 DSAFGRAYYNRGLANFRLRSYRKAVNDFDRALDHNFDSAPVFLNRGLALAGLGERGAALA 499

Query: 641 DYDAALDL 648
           D+  A  L
Sbjct: 500 DWRKAATL 507



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 66/137 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SR    V    Y  AI+ +D+++  +P  P A +GRG AR   ++ + A++D+ +A+  +
Sbjct: 381 SRAELHVRLKAYKEAIADYDRVIALEPKLPTAYVGRGNARLGLQDTQGALADYDQALALD 440

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG A   L    +A+ D  +AL+   +SA +   RG+      +  AA+ D
Sbjct: 441 SAFGRAYYNRGLANFRLRSYRKAVNDFDRALDHNFDSAPVFLNRGLALAGLGERGAALAD 500

Query: 506 LSACVKLDKENKSAYTY 522
                 L +E      Y
Sbjct: 501 WRKAATLFRERNDQVGY 517


>gi|110637714|ref|YP_677921.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110280395|gb|ABG58581.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 515

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 124/276 (44%), Gaps = 8/276 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+++  EG    AI+ F   +K D  Y EA   R          E +I+D+++ I   P
Sbjct: 239 RGMSKSKEGFRDEAIADFTTAIKYDSSYAEAYQNRAHELFLLSRYEESITDYSKVIALQP 298

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  RGQ++A  G+ VEAI D +KA+   PN       RG       +F+ A++D 
Sbjct: 299 DNFQAYFGRGQSKAEFGKHVEAIADYNKAIVLYPNFTYAYFYRGFSKSYLDNFSDAIKDF 358

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++LD  +  AY          G+Y+ A + + K I L   + EA+         + +
Sbjct: 359 NKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYNKCISLKPQYEEAYFQKANTLYMMGD 418

Query: 567 SEKALECLQQVLYIDKRF---SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
              A++   +++   K+F   S AY  RG     + + K+A+ D +  + ++ +N E   
Sbjct: 419 KTAAIKEYDEIV---KKFPNESAAYANRGFFNMNIKKDKEAMDDFNKAITLNENNPEAYR 475

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
            RA     I +   A  D   A  + L   E  VLQ
Sbjct: 476 YRAVLKSEIKDKEGACADLAKA--VALGDQESIVLQ 509



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 147/342 (42%), Gaps = 12/342 (3%)

Query: 310 KLSSDSASLNDSNTNSESYSKSSISDNKSSDS--TESRSKLSFKWDMLKETSNEAK---- 363
           KLS +S    +S  N+  Y+ SSI + K  D    + R   SF W  +    ++ K    
Sbjct: 90  KLSYESL---ESAFNAGKYT-SSIDEVKVGDVYIAKIRESKSFAWIKITHIEDDGKSKAT 145

Query: 364 --RNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGR 421
              N  +     +   +I      + G+    +G +  A   F      DP   EA    
Sbjct: 146 GGNNNDYIEFEYTVFSNIDTHGTFNEGLELFKKGNFIGAYDKFKAAAVADPNGYEAYYYM 205

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G  +    +  AAI++F +AI   P    A+ +RG +++  G   EAI D + A++++ +
Sbjct: 206 GLCKMELGDYPAAITNFDKAIDIKPKYTAAFSKRGMSKSKEGFRDEAIADFTTAIKYDSS 265

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A+    R    F    +  ++ D S  + L  +N  AY   G + +  G++ +A   + 
Sbjct: 266 YAEAYQNRAHELFLLSRYEESITDYSKVIALQPDNFQAYFGRGQSKAEFGKHVEAIADYN 325

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KAI L  NF  A+ +       L N   A++   + + +D     AY  R       G +
Sbjct: 326 KAIVLYPNFTYAYFYRGFSKSYLDNFSDAIKDFNKAIQLDPNDHPAYFNRAYCKREEGDY 385

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           + AIKD +  + + P   E  + +A+  + +G+   AIK+YD
Sbjct: 386 EGAIKDYNKCISLKPQYEEAYFQKANTLYMMGDKTAAIKEYD 427



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 57/128 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +R   +  EG Y  AI  +++ +   P Y EA   +        +  AAI ++ E ++ 
Sbjct: 373 FNRAYCKREEGDYEGAIKDYNKCISLKPQYEEAYFQKANTLYMMGDKTAAIKEYDEIVKK 432

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P+   A+  RG     + +  EA+ D +KA+    N+ +    R ++  + KD   A  
Sbjct: 433 FPNESAAYANRGFFNMNIKKDKEAMDDFNKAITLNENNPEAYRYRAVLKSEIKDKEGACA 492

Query: 505 DLSACVKL 512
           DL+  V L
Sbjct: 493 DLAKAVAL 500



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/187 (20%), Positives = 84/187 (44%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G  + A      A   +PN  +  +  G+   +  D+ AA+ +    + +  +  +A++ 
Sbjct: 179 GNFIGAYDKFKAAAVADPNGYEAYYYMGLCKMELGDYPAAITNFDKAIDIKPKYTAAFSK 238

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            G++ S  G   +A      AI+ D ++ EA+ +       L+  E+++    +V+ +  
Sbjct: 239 RGMSKSKEGFRDEAIADFTTAIKYDSSYAEAYQNRAHELFLLSRYEESITDYSKVIALQP 298

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
              +AY  RG      G+H +AI D +  + + P+     + R      +  + +AIKD+
Sbjct: 299 DNFQAYFGRGQSKAEFGKHVEAIADYNKAIVLYPNFTYAYFYRGFSKSYLDNFSDAIKDF 358

Query: 643 DAALDLE 649
           + A+ L+
Sbjct: 359 NKAIQLD 365



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 16/172 (9%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GL L   G +  A +    A   D N  EA+ ++     +L +   A+    + + I  +
Sbjct: 172 GLELFKKGNFIGAYDKFKAAAVADPNGYEAYYYMGLCKMELGDYPAAITNFDKAIDIKPK 231

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           ++ A+  RG+     G   +AI D ++ +  D S  E    RA     +  Y E+I DY 
Sbjct: 232 YTAAFSKRGMSKSKEGFRDEAIADFTTAIKYDSSYAEAYQNRAHELFLLSRYEESITDYS 291

Query: 644 AALDLELDSMEKFV------------LQCLAFYQKEIALYTASKINSEFCWF 683
             + L+ D+ + +             ++ +A Y K I LY     N  + +F
Sbjct: 292 KVIALQPDNFQAYFGRGQSKAEFGKHVEAIADYNKAIVLYP----NFTYAYF 339


>gi|124004030|ref|ZP_01688877.1| TPR repeat [Microscilla marina ATCC 23134]
 gi|123990609|gb|EAY30089.1| TPR repeat [Microscilla marina ATCC 23134]
          Length = 603

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 140/318 (44%), Gaps = 35/318 (11%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           + SAI  +D+ +        +   RG A+A  +    A  D+ +AI  +P    A+  RG
Sbjct: 142 FQSAIDDYDKSIGLKMADAASYNNRGWAKAKLKRFTEAEQDYNKAIAMDPEYAMAYNNRG 201

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
             RA LG+   +++D SK++   P  +D    RGI +++F +   A +D ++ ++L  +N
Sbjct: 202 YVRAKLGDYTNSVRDYSKSIILNPRFSDAYLWRGITHYRFGNQEQACKDWTSALRL--KN 259

Query: 517 KSAYTYLGLALSSIGEYKKAEE-------------------AHLKAIQLDRNFLEAWGHL 557
           + A  +L    +  G  K A+E                   A+ K + L  +   A+GH 
Sbjct: 260 QKAQRWLDDFCTGDGPAKTADEYFADGDKALLNEKWQEAISAYTKCVHLKSDHYMAYGHR 319

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
            +  +   N ++A+    + + I+  +  AY  RG       ++ +A+ D    + + PS
Sbjct: 320 GRANRKAGNLDQAIADFSKAIKINPEYDWAYASRGYAKVVAKKYTEALLDFDKAIALKPS 379

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ------------ 665
                  RA   + +G Y+ AI+DY+ AL ++ +    +  + LA Y+            
Sbjct: 380 YRWAYAHRARTKYYLGRYKNAIEDYNNALKIDPNDGWSYRNRALARYELGDAVGTCADLK 439

Query: 666 --KEIALYTASKINSEFC 681
             KE+  Y A  +  E+C
Sbjct: 440 KAKELGDYKAEGLIQEYC 457



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 98/231 (42%), Gaps = 34/231 (14%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E     G  +  + + + A++D+  AI    +    +  R  A+  LG  +E++QD   A
Sbjct: 25  EEYFDSGNQKLMKEDYDGAVNDYNNAIAQKTNVAAFFANRAIAKYRLGRYLESVQDCDIA 84

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE-----NKSAYTYL------- 523
           L  EPN + + + RG+ NF  K +  AV D +    L+       N  A+TYL       
Sbjct: 85  LRLEPNQSKVYNNRGLANFGLKRYKEAVSDYTKATALEPTFAKAYNNRAFTYLTMRVFQS 144

Query: 524 ----------------------GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
                                 G A + +  + +AE+ + KAI +D  +  A+ +     
Sbjct: 145 AIDDYDKSIGLKMADAASYNNRGWAKAKLKRFTEAEQDYNKAIAMDPEYAMAYNNRGYVR 204

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
             L +   ++    + + ++ RFS AY  RG+  +  G  ++A KD +S L
Sbjct: 205 AKLGDYTNSVRDYSKSIILNPRFSDAYLWRGITHYRFGNQEQACKDWTSAL 255



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 105/252 (41%), Gaps = 22/252 (8%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G    AI+ F + +K +P Y  A   RG A+   ++   A+ DF +AI   P
Sbjct: 319 RGRANRKAGNLDQAIADFSKAIKINPEYDWAYASRGYAKVVAKKYTEALLDFDKAIALKP 378

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S   A+  R + +  LG    AI+D + AL+ +PN       R +  ++  D      DL
Sbjct: 379 SYRWAYAHRARTKYYLGRYKNAIEDYNNALKIDPNDGWSYRNRALARYELGDAVGTCADL 438

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEA-HLKAIQLDRNFLEAW----GHLTQFY 561
               +L       Y   GL    I EY K   + + +     RN+            QFY
Sbjct: 439 KKAKEL-----GDYKAEGL----IQEYCKTRGSNNQRTTDTTRNYNTGLSSSNAEAIQFY 489

Query: 562 QDLANSE-------KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           + L N          A+    Q ++ D RF +AY  RG     L  ++ AIKD  + L +
Sbjct: 490 K-LGNERLDNEAFYDAITRYTQAIWADARFKEAYMDRGHAKIRLKDYRSAIKDFDNALLL 548

Query: 615 DPSNIECLYLRA 626
           D +  E  YLR 
Sbjct: 549 DINYSEAYYLRG 560


>gi|284041455|ref|YP_003391385.1| hypothetical protein Slin_6629 [Spirosoma linguale DSM 74]
 gi|283820748|gb|ADB42586.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
          Length = 458

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 126/277 (45%), Gaps = 15/277 (5%)

Query: 365 NKKFCVTRISKSKSISVDFR-------------LSRGIAQVNEGKYASAISIFDQILKED 411
           N+  C  +I+ + +   DF              ++RG  ++    Y  A++ ++  L++ 
Sbjct: 137 NRGLCRLQINYTTTALADFTKAVTLAPNDVTMLIARGNCKMQLNDYKGALADYNLSLEKS 196

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P  P AL GRG AR    + + AI DF  A++ +    E + RRG  ++ LGE   A+ D
Sbjct: 197 PNKPLALAGRGYARFKLEDYKNAILDFNRAVELSKDDPELYYRRGLVKSRLGEFENALTD 256

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG--LALSS 529
             K ++  P+    L  RG    +  +   AV D+   +++   N +   Y    +  S+
Sbjct: 257 FDKTVQLNPSHFRALFSRGFCKSRLGNVKQAVADIDKSIEMGTANTTNKAYYSDFITAST 316

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +  +    +   KA +L  +  +A+           +S+ AL+ L + + +    ++ Y 
Sbjct: 317 LQLFGSVVQDRYKATELTDDRADAYLVRGIIRNSGGDSKLALQDLNRAVELSPTNAETYF 376

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           +RG++   LG  K A+ D +S + ++P + E  YLR 
Sbjct: 377 IRGVVRSSLGDQKGALIDCNSSIKLNPRHAEAYYLRG 413



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 137/313 (43%), Gaps = 36/313 (11%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RGI +  +  +  A+  F++ ++  P        RG  R        A++DFT+A+  
Sbjct: 102 LYRGINRTRQEDFRGAMQDFNRAIELSPNDALFYYNRGLCRLQINYTTTALADFTKAVTL 161

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P+       RG  +  L +   A+ D + +LE  PN    L  RG   FK +D+  A+ 
Sbjct: 162 APNDVTMLIARGNCKMQLNDYKGALADYNLSLEKSPNKPLALAGRGYARFKLEDYKNAIL 221

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
           D +  V+L K++   Y   GL  S +GE++ A     K +QL+ +   A          L
Sbjct: 222 DFNRAVELSKDDPELYYRRGLVKSRLGEFENALTDFDKTVQLNPSHFRALFSRGFCKSRL 281

Query: 558 TQFYQDLANSEKALE-----CLQQVLYID---------------KRF---------SKAY 588
               Q +A+ +K++E        +  Y D                R+         + AY
Sbjct: 282 GNVKQAVADIDKSIEMGTANTTNKAYYSDFITASTLQLFGSVVQDRYKATELTDDRADAY 341

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            +RG++ +  G  K A++DL+  + + P+N E  ++R     ++G+ + A+ D ++++ L
Sbjct: 342 LVRGIIRNSGGDSKLALQDLNRAVELSPTNAETYFIRGVVRSSLGDQKGALIDCNSSIKL 401

Query: 649 ELDSMEKFVLQCL 661
                E + L+ +
Sbjct: 402 NPRHAEAYYLRGI 414



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 112/264 (42%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            + GI +     Y  A+  F   + ++P    +   R   +    +++ A  D   AI+ 
Sbjct: 34  FNEGIQKSAAKDYPGALQAFTMSIIQNPENGPSYYNRALTKISLNDIQGANLDLDLAIEF 93

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A+  RG  R    +   A+QD ++A+E  PN A   + RG+   +      A+ 
Sbjct: 94  TPGDANAYLYRGINRTRQEDFRGAMQDFNRAIELSPNDALFYYNRGLCRLQINYTTTALA 153

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  V L   + +     G     + +YK A   +  +++   N   A          L
Sbjct: 154 DFTKAVTLAPNDVTMLIARGNCKMQLNDYKGALADYNLSLEKSPNKPLALAGRGYARFKL 213

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            + + A+    + + + K   + Y+ RGL+   LG+ + A+ D    + ++PS+   L+ 
Sbjct: 214 EDYKNAILDFNRAVELSKDDPELYYRRGLVKSRLGEFENALTDFDKTVQLNPSHFRALFS 273

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R  C   +G  ++A+ D D ++++
Sbjct: 274 RGFCKSRLGNVKQAVADIDKSIEM 297


>gi|148285081|ref|YP_001249171.1| hypothetical protein OTBS_2002 [Orientia tsutsugamushi str.
           Boryong]
 gi|146740520|emb|CAM81097.1| tetratricopeptide repeat protein with 9 trp repeats [Orientia
           tsutsugamushi str. Boryong]
          Length = 379

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 4/179 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GIA +N G   +AI  +D  +K  P Y EA I +G   AF  +L+ AI  F  AI+ +
Sbjct: 181 NKGIALMNLGDIQNAIENYDMAIKYRPNYAEAYINKGLTLAFLGQLQNAIEHFDLAIKYD 240

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           PS  ++   +G   + L    EA++  + A++++PN ADI + +G++  K      AVE+
Sbjct: 241 PSCVKSHCNKGYVLSLLKRYSEAVESCNLAIKYDPNCADIYYNKGMIFEKLGKHQEAVEN 300

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW----GHLTQF 560
               +K +      Y   G++L S+G+Y KA+E    AI+   N +  +      LT+F
Sbjct: 301 FDIAIKYNPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYMPNLIAEYEATIKRLTEF 359



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 133/285 (46%), Gaps = 34/285 (11%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  AI  +D  +K DP Y  A   +G A     + + AI +F  AI+ NP   EA+  +
Sbjct: 55  KYHEAIKNYDIAIKYDPSYASAYNSKGIALNNLEKPKEAIENFDLAIKYNPHFAEAYNNK 114

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
             +   LG++ EAI     A++++PN     + +G       ++  A+E+    ++ +  
Sbjct: 115 AVSYGKLGKNKEAIVLCDLAIKYKPNYVTAYNTKGASLNDLGEYEEAMENFDIAIRYNSS 174

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALE 572
              AY   G+AL ++G+ + A E +  AI+   N+ EA+   G    F   L N+ +  +
Sbjct: 175 YPEAYYNKGIALMNLGDIQNAIENYDMAIKYRPNYAEAYINKGLTLAFLGQLQNAIEHFD 234

Query: 573 --------CLQQ------VLYIDKRFSKA-----------------YHLRGLLLHGLGQH 601
                   C++       VL + KR+S+A                 Y+ +G++   LG+H
Sbjct: 235 LAIKYDPSCVKSHCNKGYVLSLLKRYSEAVESCNLAIKYDPNCADIYYNKGMIFEKLGKH 294

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           ++A+++    +  +P+  E    +     ++G+Y +A ++++ A+
Sbjct: 295 QEAVENFDIAIKYNPNFAENYLEKGISLVSLGQYSKAKENFNLAI 339



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 105/225 (46%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GK   AI + D  +K  P Y  A   +G +     E E A+ +F  AI+ N S  EA+  
Sbjct: 122 GKNKEAIVLCDLAIKYKPNYVTAYNTKGASLNDLGEYEEAMENFDIAIRYNSSYPEAYYN 181

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   LG+   AI++   A+++ PN A+    +G+          A+E     +K D 
Sbjct: 182 KGIALMNLGDIQNAIENYDMAIKYRPNYAEAYINKGLTLAFLGQLQNAIEHFDLAIKYDP 241

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
               ++   G  LS +  Y +A E+   AI+ D N  + + +    ++ L   ++A+E  
Sbjct: 242 SCVKSHCNKGYVLSLLKRYSEAVESCNLAIKYDPNCADIYYNKGMIFEKLGKHQEAVENF 301

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +  +  F++ Y  +G+ L  LGQ+ KA ++ +  +   P+ I
Sbjct: 302 DIAIKYNPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYMPNLI 346



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 62/127 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +++G+     G+  +AI  FD  +K DP   ++   +G   +  +    A+     AI+ 
Sbjct: 214 INKGLTLAFLGQLQNAIEHFDLAIKYDPSCVKSHCNKGYVLSLLKRYSEAVESCNLAIKY 273

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+  + +  +G     LG+  EA+++   A+++ PN A+   E+GI       ++ A E
Sbjct: 274 DPNCADIYYNKGMIFEKLGKHQEAVENFDIAIKYNPNFAENYLEKGISLVSLGQYSKAKE 333

Query: 505 DLSACVK 511
           + +  +K
Sbjct: 334 NFNLAIK 340



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 11/121 (9%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITAR-IELAKLC----SLRNWSKAIRILDSLLAQS 66
           RL K H+ I   D  ++ D   ASA  ++ I L  L     ++ N+  AI+  +   A++
Sbjct: 52  RLKKYHEAIKNYDIAIKYDPSYASAYNSKGIALNNLEKPKEAIENFDLAIK-YNPHFAEA 110

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
           Y      N+A  Y +L  +K  I  CD A++  P  + AY  KG + + LG  EEA+  +
Sbjct: 111 YN-----NKAVSYGKLGKNKEAIVLCDLAIKYKPNYVTAYNTKGASLNDLGEYEEAMENF 165

Query: 127 E 127
           +
Sbjct: 166 D 166



 Score = 41.2 bits (95), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 8/94 (8%)

Query: 37  ITARIELAKLCSLRNWSKAIRILDSLLAQSYE---IQDICNRAFCYSQLELHKHVIRDCD 93
           I   + LA L  L+N   AI   D  LA  Y+   ++  CN+ +  S L+ +   +  C+
Sbjct: 214 INKGLTLAFLGQLQN---AIEHFD--LAIKYDPSCVKSHCNKGYVLSLLKRYSEAVESCN 268

Query: 94  KALQLDPTLLQAYILKGCAFSALGRKEEALSVWE 127
            A++ DP     Y  KG  F  LG+ +EA+  ++
Sbjct: 269 LAIKYDPNCADIYYNKGMIFEKLGKHQEAVENFD 302


>gi|449119628|ref|ZP_21756024.1| hypothetical protein HMPREF9725_01489 [Treponema denticola H1-T]
 gi|449122019|ref|ZP_21758365.1| hypothetical protein HMPREF9727_01125 [Treponema denticola MYR-T]
 gi|449131739|ref|ZP_21767926.1| hypothetical protein HMPREF9724_02591 [Treponema denticola SP37]
 gi|448938371|gb|EMB19304.1| hypothetical protein HMPREF9724_02591 [Treponema denticola SP37]
 gi|448949460|gb|EMB30285.1| hypothetical protein HMPREF9727_01125 [Treponema denticola MYR-T]
 gi|448950618|gb|EMB31440.1| hypothetical protein HMPREF9725_01489 [Treponema denticola H1-T]
          Length = 370

 Score = 90.9 bits (224), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 8/272 (2%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI   ++ LK +P Y E+++ RG       +   AI DF+  I+  P+   A+  R    
Sbjct: 74  AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G+  +A+ D++ A++ +P  +     RG + ++ KD++ A+ + +  +KL+  +  A
Sbjct: 134 LEFGDFEKALSDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   GL   +I +Y  A   + KA++L     + + H+      L   + A+    + + 
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I+   ++AY  RG +   L  +  +IKDL   + +  SN    Y +A   ++  E  EAI
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAI 313

Query: 640 KDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
              +  ++L  D  +        FYQ +  +Y
Sbjct: 314 DCLEEGINLFPDYYD--------FYQVKAKIY 337



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 14/289 (4%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           I Q+N  KY   I       ++DP   +    RG   +     + AI D   +++ NP+ 
Sbjct: 36  IYQMNLSKYERQI-------EKDPNNYKLYYERGYYYSLSGYYDLAIHDINRSLKINPNY 88

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E+   RG    A+ +  EAI D S+ +E  PN     + R     +F DF  A+ D+++
Sbjct: 89  EESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALSDINS 148

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            +KLD ++   +   G     + +Y  A   + +A++L+    +A+     FY+ + +  
Sbjct: 149 AIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYN 208

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            AL    + L +  R +  Y   GL  + L ++  AI   +  + I+ ++ E    R S 
Sbjct: 209 SALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSI 268

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN 677
           Y  +  Y  +IKD D A++L   S E      + FY K +ALY+ +++N
Sbjct: 269 YFILKNYDNSIKDLDMAINLG-GSNE------VVFYNKAVALYSKNELN 310



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 3/265 (1%)

Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           I++S  I+ ++    L RG+      KY  AI  F ++++  P  P A   R +      
Sbjct: 78  INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + E A+SD   AI+ +P     +K RG+    L +   AI + ++AL+  P  +D    R
Sbjct: 138 DFEKALSDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+     KD+N+A+ D    +KL   +   Y ++GL+  ++ EY  A  A  K I+++  
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             EA+      Y  L N + +++ L   + +       ++ + + L+   +  +AI  L 
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317

Query: 610 SGLGIDPSNIECLYLRASCYHAIGE 634
            G+ + P   +   ++A  Y ++ E
Sbjct: 318 EGINLFPDYYDFYQVKAKIYRSLSE 342


>gi|425442275|ref|ZP_18822529.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9717]
 gi|389716789|emb|CCH99016.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9717]
          Length = 707

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 128/263 (48%), Gaps = 1/263 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
           +Y  A++ + Q LK +P Y EAL G+  A    +    A++ + +AIQ NP SA +AW  
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RGQA   LG++ EA++   + L   P ++     +  +  + + ++AA + L   +   +
Sbjct: 407 RGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQ 466

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +   +   G +L +I +Y+ A +A+ +A+ L+ +    W         L     ALE  
Sbjct: 467 NDAKTWYKKGWSLQNIEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALESY 526

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            +    + +FS+A++ +G++L  L +  +A++  +     + +  +    + +  H +  
Sbjct: 527 SKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATKANSNYYQAWLNQGALLHQMER 586

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
           ++EAI  Y+ A  +     E F+
Sbjct: 587 FQEAIASYEKARRISSQKAEVFI 609



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 123/262 (46%), Gaps = 5/262 (1%)

Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y+ A++ +++ ++ +P    +A +GRG A     + + A+  F   +  NP+A +AW+ 
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQG 440

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      L +   A + L K L F+ N A   +++G      +D+  AV+     + L+ 
Sbjct: 441 KADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNIEDYEGAVKAYDQALALES 500

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
           +N   +   G +L  + +   A E++ KA Q +  F +A  H +Q    Q L    +ALE
Sbjct: 501 DNALIWYQKGNSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLDRKSEALE 558

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              Q    +  + +A+  +G LLH + + ++AI        I     E      + ++ +
Sbjct: 559 AFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRL 618

Query: 633 GEYREAIKDYDAALDLELDSME 654
           G+Y +AI  Y  A+  + D+ E
Sbjct: 619 GDYSQAIIAYQQAIQRQKDNPE 640



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 9/216 (4%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           NS D  +++G   ++ K +  A+      +K++ +   A      AL ++  Y +A   +
Sbjct: 331 NSLD-YYQQGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTY 389

Query: 541 LKAIQLDRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
            KAIQ++ +   +AW    Q    L  +++ALE  ++VL ++   S+A+  +  +   L 
Sbjct: 390 EKAIQINPDSAWQAWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQ 449

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
           Q+  A K L   L    ++ +  Y +      I +Y  A+K YD AL LE D+       
Sbjct: 450 QYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNIEDYEGAVKAYDQALALESDN------- 502

Query: 660 CLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKE 695
            L +YQK  +LY  +KIN     +   G  +P F +
Sbjct: 503 ALIWYQKGNSLYQLNKINDALESYSKAGQFNPQFSQ 538



 Score = 43.9 bits (102), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 52/262 (19%), Positives = 106/262 (40%), Gaps = 34/262 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A    GK   A+  F+++L  +P   +A  G+       ++  AA     + +  
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             +  + W ++G +   + +   A++   +AL  E ++A I +++G   ++    N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNIEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALE 524

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
             S   + + +   A+   G+ L  +    +A EA  +A + + N+ +AW         +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATKANSNYYQAWLNQGALLHQM 584

Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
            +F + +A+ EKA                           +   QQ +   K   + +  
Sbjct: 585 ERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIAYQQAIQRQKDNPETWKS 644

Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
            G     LGQ+++AI+     L
Sbjct: 645 LGNSCFKLGQYERAIQAYQESL 666



 Score = 43.1 bits (100), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 67/140 (47%), Gaps = 2/140 (1%)

Query: 411 DPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
           +P + +A   +G   +   R+ EA +  FT+A ++N +  +AW  +G     +    EAI
Sbjct: 533 NPQFSQAHYSQGIILQKLDRKSEA-LEAFTQATKANSNYYQAWLNQGALLHQMERFQEAI 591

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
               KA       A++    G   ++  D++ A+      ++  K+N   +  LG +   
Sbjct: 592 ASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIAYQQAIQRQKDNPETWKSLGNSCFK 651

Query: 530 IGEYKKAEEAHLKAIQLDRN 549
           +G+Y++A +A+ ++++   N
Sbjct: 652 LGQYERAIQAYQESLRYRSN 671



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 10/200 (5%)

Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
           LN  N   ESYSK+   + + S +  S+  +  K D   E             T+ +K+ 
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALE--------AFTQATKAN 567

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S      L++G       ++  AI+ +++  +      E  IG G A     +   AI  
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAIIA 627

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +AIQ      E WK  G +   LG+   AIQ   ++L +  N  ++  ++ +   +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687

Query: 498 DFNAAVEDLSACVKLDKENK 517
           +   + ++ +   K+D E +
Sbjct: 688 ELQQSSQNQTP--KVDNEEQ 705


>gi|270293968|ref|ZP_06200170.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275435|gb|EFA21295.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 681

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 114/257 (44%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    RG A+    + + A SD   AIQ NP    A++ RG
Sbjct: 33  YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRG 92

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +  EAI+D   A++++P +  + H   + + + +D+ AA EDL   + +    
Sbjct: 93  LARIRQNKFDEAIEDYKTAIKYDPENVVLWHNLSLCHIQKEDYEAAKEDLGTLLTIAPRY 152

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +  +A     KAI +DR   + WG            ++A   L Q
Sbjct: 153 TRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQ 212

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            +++  + +  Y  R L        + A+ D    L IDP+N    Y R      +G+  
Sbjct: 213 SIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDN 272

Query: 637 EAIKDYDAALDLELDSM 653
            AI+D+D  L +E D+M
Sbjct: 273 RAIEDFDFVLKMEPDNM 289



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ +GKY  A +  DQ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 192 ARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 251

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    L+ EP++   +  RG++  +  D+  A+ D
Sbjct: 252 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMAIFNRGLLRAQTGDYRGAISD 311

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            S  +       + Y     A   IG+ K AE+   K +++
Sbjct: 312 YSKVIAEYPNFMAGYYQRAEARKKIGDCKGAEQDEFKIMKM 352



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 9/236 (3%)

Query: 458 ARAAL--GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           AR AL   + V +IQ  ++ +  +P   +    RG+      D+  A  D  A ++ +  
Sbjct: 24  ARNALYFEDYVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPF 83

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   GLA     ++ +A E +  AI+ D   +  W +L+  +    + E A E L 
Sbjct: 84  VVGAYQIRGLARIRQNKFDEAIEDYKTAIKYDPENVVLWHNLSLCHIQKEDYEAAKEDLG 143

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            +L I  R+++AY +RG +        +A++D    + +D  + +    RA      G+Y
Sbjct: 144 TLLTIAPRYTRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKY 203

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +EA  D D ++ L   +   ++ + LA + +       + +      +D+  DIDP
Sbjct: 204 KEAEADLDQSIHLSAKNAGNYINRALARFHQ-------NNLRGAMSDYDLALDIDP 252



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 74/170 (43%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +     A+  FD+ +  D   P+    R   R  Q + + A +D  ++I  
Sbjct: 157 LMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQSIHL 216

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 217 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIE 276

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A   + K I    NF+  +
Sbjct: 277 DFDFVLKMEPDNMMAIFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGY 326



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 96/263 (36%), Gaps = 34/263 (12%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           +  + +  Y +A      +L   P Y  A + RG     Q +   A+ DF +AI  +   
Sbjct: 127 LCHIQKEDYEAAKEDLGTLLTIAPRYTRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYD 186

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            + W  R   R   G+  EA  DL +++     +A     R +  F   +   A+ D   
Sbjct: 187 PDGWGARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDL 246

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + +D  N   +   GL  + +G+                                    
Sbjct: 247 ALDIDPNNFLGHYNRGLLRAQVGD----------------------------------DN 272

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+E    VL ++     A   RGLL    G ++ AI D S  +   P+ +   Y RA  
Sbjct: 273 RAIEDFDFVLKMEPDNMMAIFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEA 332

Query: 629 YHAIGEYREAIKDYDAALDLELD 651
              IG+ + A +D    + +++D
Sbjct: 333 RKKIGDCKGAEQDEFKIMKMQID 355



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD +LK +P    A+  RG  RA   +   AISD+++ I   
Sbjct: 260 NRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMAIFNRGLLRAQTGDYRGAISDYSKVIAEY 319

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           P+    + +R +AR  +G+   A QD  K ++ +
Sbjct: 320 PNFMAGYYQRAEARKKIGDCKGAEQDEFKIMKMQ 353



 Score = 46.6 bits (109), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 41/80 (51%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D +++  P +      RG   +  ++  AA++D+ +AI+ +P   EA+  RG     LG
Sbjct: 590 LDHVIQLAPDFVYGYYNRGNVSSLLKDYRAALADYDKAIELSPDFAEAYFNRGLTHIFLG 649

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            + + I DLSKA E    SA
Sbjct: 650 NNKQGIADLSKAGELGIVSA 669



 Score = 44.3 bits (103), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   ++ 
Sbjct: 225 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKM 284

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AI D SK +   PN     ++R     K  D   A +
Sbjct: 285 EPDNMMAIFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEARKKIGDCKGAEQ 344

Query: 505 DLSACVKL--DKEN 516
           D    +K+  DK N
Sbjct: 345 DEFKIMKMQIDKRN 358


>gi|159026574|emb|CAO86506.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 447

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 135/288 (46%), Gaps = 13/288 (4%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G    N G+Y  A+S +++ ++  P Y  A   +G   A     E A+S + EAI+  
Sbjct: 45  NKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYQEAIRLK 104

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  +G   A LG   EA+    +A+  +P+     H +G    +  +     E 
Sbjct: 105 PDYDYAWNGKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHNKG---NQLGNLGRYEEA 161

Query: 506 LSAC---VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           LSAC   ++L  + + A+   G  L+++G Y++A  A  +AI+L  ++  AW        
Sbjct: 162 LSACEEAIRLKPDYELAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEVAWAVKGNQLA 221

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +L   E+AL   ++ + +   +  A+ ++G  L  LG++++A+      + + P   +  
Sbjct: 222 NLGRYEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEDAW 281

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
             +      +  Y EAI  YD  + L++D++E       A Y+K + L
Sbjct: 282 LGKGYQLGNLYRYEEAIAAYDEVIKLKVDNIE-------AMYRKAMIL 322



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 134/292 (45%), Gaps = 5/292 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + +G    N G+Y  A+S +++ ++  P Y  A   +G   A     E A+S + EAI+ 
Sbjct: 10  VGKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYEEAIRL 69

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    AW  +G   A LG   EA+    +A+  +P+     + +G        +  A+ 
Sbjct: 70  KPDYEAAWHNKGNQLANLGRYEEALSAYQEAIRLKPDYDYAWNGKGNQLANLGRYEEALS 129

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                ++L  + ++A+   G  L ++G Y++A  A  +AI+L  ++  AW        +L
Sbjct: 130 AYEEAIRLKPDYEAAWHNKGNQLGNLGRYEEALSACEEAIRLKPDYELAWAVKGNQLANL 189

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+AL   ++ + +   +  A+ ++G  L  LG++++A+      + + P       +
Sbjct: 190 GRYEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEVAWAV 249

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEIALY 671
           + +    +G Y EA+   + A+ L+ D  + ++     L  L  Y++ IA Y
Sbjct: 250 KGNQLANLGRYEEALSACEEAIRLKPDYEDAWLGKGYQLGNLYRYEEAIAAY 301



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 111/240 (46%)

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P Y  A +G+G   A     E A+S + EAI+  P    AW  +G   A LG   EA+  
Sbjct: 3   PDYEAAWVGKGNQLANLGRYEEALSAYEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSA 62

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
             +A+  +P+     H +G        +  A+      ++L  +   A+   G  L+++G
Sbjct: 63  YEEAIRLKPDYEAAWHNKGNQLANLGRYEEALSAYQEAIRLKPDYDYAWNGKGNQLANLG 122

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
            Y++A  A+ +AI+L  ++  AW +      +L   E+AL   ++ + +   +  A+ ++
Sbjct: 123 RYEEALSAYEEAIRLKPDYEAAWHNKGNQLGNLGRYEEALSACEEAIRLKPDYELAWAVK 182

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G  L  LG++++A+      + + P       ++ +    +G Y EA+   + A+ L+ D
Sbjct: 183 GNQLANLGRYEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKPD 242



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 35/259 (13%)

Query: 379 ISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           +  D+ L+   +G    N G+Y  A+S  ++ ++  P Y  A   +G   A     E A+
Sbjct: 171 LKPDYELAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEAL 230

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           S   EAI+  P    AW  +G   A LG   EA+    +A+  +P+  D    +G     
Sbjct: 231 SACEEAIRLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKPDYEDAWLGKGYQLGN 290

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
              +  A+      +KL  +N  A             Y+KA    +   +LD        
Sbjct: 291 LYRYEEAIAAYDEVIKLKVDNIEAM------------YRKA----MILKKLD-------- 326

Query: 556 HLTQFYQDLANSEKAL--ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
                +QDLAN +  L  E  QQ    D +    +++    L  LGQ++   + L   + 
Sbjct: 327 -----HQDLANQQFHLIVETCQQYKNKDNQTIDCWNVYAASLTCLGQYEDVEQILQKAIA 381

Query: 614 IDPSNIECLYLRASCYHAI 632
            +P+     Y   +CY+AI
Sbjct: 382 SNPNYPPTNY-NLACYYAI 399



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G    N G+Y  A+S  ++ ++  P Y  A   +G   A     E A+S   EAI+  P
Sbjct: 216 KGNQLANLGRYEEALSACEEAIRLKPDYEVAWAVKGNQLANLGRYEEALSACEEAIRLKP 275

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF-------KDF 499
              +AW  +G     L    EAI    + ++ + ++ + ++ + ++  K        + F
Sbjct: 276 DYEDAWLGKGYQLGNLYRYEEAIAAYDEVIKLKVDNIEAMYRKAMILKKLDHQDLANQQF 335

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           +  VE        D +    +     +L+ +G+Y+  E+   KAI  + N+     +L  
Sbjct: 336 HLIVETCQQYKNKDNQTIDCWNVYAASLTCLGQYEDVEQILQKAIASNPNYPPTNYNLAC 395

Query: 560 FYQDLANSEKALECLQQVL 578
           +Y    N   A+E L + +
Sbjct: 396 YYAIQDNIPLAVEYLAKAI 414


>gi|145504450|ref|XP_001438197.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405358|emb|CAK70800.1| unnamed protein product [Paramecium tetraurelia]
          Length = 728

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 118/226 (52%), Gaps = 8/226 (3%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQ-ARAALGESVEAIQDLSKALEFEPNSADILHER 489
           ++ A  +  +A++ +P   EA++ RG+       E ++A+ DL++A+   P+     + R
Sbjct: 1   MDHAQEEINKALKLDPKYAEAYQLRGRLIHFKKEEKLKALDDLNQAIFHNPSLVSSFYHR 60

Query: 490 GI-------VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           GI       V  K +  + A+ED    +KL+ +   AY+  G  +   G   +A + + K
Sbjct: 61  GISKTDVATVYQKNQMLDKALEDCDQAIKLNPDYALAYSKKGSLMKIKGRLDEALDLYSK 120

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           AI LD+N   A+ H    ++++   EKAL+   Q + I++    AY  RG+LL  +G+++
Sbjct: 121 AIGLDKNCSNAFLHRALLFKEIRQLEKALKDYNQAIEINQNNPNAYFNRGVLLKEIGEYE 180

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           +A++D    + ++P+N      R +   ++ +   A+KDYD A+ +
Sbjct: 181 QALQDYDRAIELNPTNASIYLNRGALLSSMNQKERALKDYDKAIQI 226



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 155/317 (48%), Gaps = 16/317 (5%)

Query: 400 AISIFDQILKEDPMYPEALIGRG-----TARAFQRE--LEAAISDFTEAIQSNPSAGEAW 452
           A+   +Q +  +P    +   RG      A  +Q+   L+ A+ D  +AI+ NP    A+
Sbjct: 39  ALDDLNQAIFHNPSLVSSFYHRGISKTDVATVYQKNQMLDKALEDCDQAIKLNPDYALAY 98

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
            ++G      G   EA+   SKA+  + N ++    R ++  + +    A++D +  +++
Sbjct: 99  SKKGSLMKIKGRLDEALDLYSKAIGLDKNCSNAFLHRALLFKEIRQLEKALKDYNQAIEI 158

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           ++ N +AY   G+ L  IGEY++A + + +AI+L+      + +       +   E+AL+
Sbjct: 159 NQNNPNAYFNRGVLLKEIGEYEQALQDYDRAIELNPTNASIYLNRGALLSSMNQKERALK 218

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + + I+  +S AY  R LLL  + Q  KA+KD +S + I+  +    + R   +  +
Sbjct: 219 DYDKAIQINPEYSNAYLNRALLLCDMDQIGKAVKDCNSIIKINKQDANAYFNRGFLFDQL 278

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAFY---QKEIAL---YTASKI-NSEFCWFDI 685
            + ++A+ DY   +++       F+ + L ++   +KE A+   +TA +I  S   +  I
Sbjct: 279 DQRQQALDDYTQTIEINPKDSRAFINRGLLYWRMQEKEKAMKDCFTALEICPSNPLYLTI 338

Query: 686 DGDIDPLFKEYWCKRLH 702
            GD+   F++   +++H
Sbjct: 339 IGDLH--FQDLQNEKVH 353



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 114/231 (49%), Gaps = 2/231 (0%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G+   A+ ++ + +  D     A + R       R+LE A+ D+ +AI+ N +   A+ 
Sbjct: 108 KGRLDEALDLYSKAIGLDKNCSNAFLHRALLFKEIRQLEKALKDYNQAIEINQNNPNAYF 167

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG     +GE  +A+QD  +A+E  P +A I   RG +         A++D    ++++
Sbjct: 168 NRGVLLKEIGEYEQALQDYDRAIELNPTNASIYLNRGALLSSMNQKERALKDYDKAIQIN 227

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            E  +AY    L L  + +  KA +     I++++    A+ +    +  L   ++AL+ 
Sbjct: 228 PEYSNAYLNRALLLCDMDQIGKAVKDCNSIIKINKQDANAYFNRGFLFDQLDQRQQALDD 287

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Q + I+ + S+A+  RGLL   + + +KA+KD  + L I PSN   LYL
Sbjct: 288 YTQTIEINPKDSRAFINRGLLYWRMQEKEKAMKDCFTALEICPSN--PLYL 336



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/185 (21%), Positives = 86/185 (46%), Gaps = 5/185 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+     G+Y  A+  +D+ ++ +P      + RG   +   + E A+ D+ +AIQ 
Sbjct: 167 FNRGVLLKEIGEYEQALQDYDRAIELNPTNASIYLNRGALLSSMNQKERALKDYDKAIQI 226

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A+  R      + +  +A++D +  ++     A+    RG +  +      A++
Sbjct: 227 NPEYSNAYLNRALLLCDMDQIGKAVKDCNSIIKINKQDANAYFNRGFLFDQLDQRQQALD 286

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHLTQFY 561
           D +  ++++ ++  A+   GL    + E +KA +    A+++   +  +L   G L   +
Sbjct: 287 DYTQTIEINPKDSRAFINRGLLYWRMQEKEKAMKDCFTALEICPSNPLYLTIIGDLH--F 344

Query: 562 QDLAN 566
           QDL N
Sbjct: 345 QDLQN 349



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 8/90 (8%)

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK-KAIKDLSSGLGIDPSNIECLYLR--- 625
           A E + + L +D ++++AY LRG L+H   + K KA+ DL+  +  +PS +   Y R   
Sbjct: 4   AQEEINKALKLDPKYAEAYQLRGRLIHFKKEEKLKALDDLNQAIFHNPSLVSSFYHRGIS 63

Query: 626 ----ASCYHAIGEYREAIKDYDAALDLELD 651
               A+ Y       +A++D D A+ L  D
Sbjct: 64  KTDVATVYQKNQMLDKALEDCDQAIKLNPD 93



 Score = 39.7 bits (91), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 16/144 (11%)

Query: 22  EIDELVRVDSVMASAITARIELA------KLCSLRNWSKAIRILDSLLAQSYEIQDI--C 73
           EI++ +++D   A A   R  L       KL +L + ++AI    SL++  Y  + I   
Sbjct: 7   EINKALKLDPKYAEAYQLRGRLIHFKKEEKLKALDDLNQAIFHNPSLVSSFYH-RGISKT 65

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGY--- 130
           + A  Y + ++    + DCD+A++L+P    AY  KG      GR +EAL ++ K     
Sbjct: 66  DVATVYQKNQMLDKALEDCDQAIKLNPDYALAYSKKGSLMKIKGRLDEALDLYSKAIGLD 125

Query: 131 ----EHALHQSADLKQFLELEELL 150
                  LH++   K+  +LE+ L
Sbjct: 126 KNCSNAFLHRALLFKEIRQLEKAL 149


>gi|329961280|ref|ZP_08299446.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
 gi|328531945|gb|EGF58762.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
          Length = 686

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 115/257 (44%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    RG A+    + + A SD   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D   A++++P +  + H   + + + KD++AA EDL   + +    
Sbjct: 98  LARIRQNKFDGAIEDYKTAIKYDPENVVLWHNLSLCHMQKKDYDAAKEDLGKLLTIAPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +  +A +   KAI +DR   + WG            ++A   L Q
Sbjct: 158 TRAYLMRGEVSLQQKDTAQALQDFDKAIAMDRYDPDGWGARAVVRIQQGKYKEAEADLDQ 217

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            +++  R +  Y  R L        + A+ D    L IDP+N    Y R      +G+  
Sbjct: 218 SIHLSVRNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDN 277

Query: 637 EAIKDYDAALDLELDSM 653
            AI+D+D  L +E D+M
Sbjct: 278 RAIEDFDFVLKIEPDNM 294



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R + ++ +GKY  A +  DQ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAVVRIQQGKYKEAEADLDQSIHLSVRNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    L+ EP++      RGI+  +  D+  A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKIEPDNMMAAFNRGILRAQTGDYRGAISD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            S  +       + Y +   A   IG+ K AE+   K +++
Sbjct: 317 YSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQDEFKIMKM 357



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 119/302 (39%), Gaps = 40/302 (13%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++N   Y  A S  D  ++ +P    A   RG AR  Q + + AI D+  AI+ +P
Sbjct: 62  RGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRGLARIRQNKFDGAIEDYKTAIKYDP 121

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                W           +   A +DL K L   P        RG V+ + KD   A++D 
Sbjct: 122 ENVVLWHNLSLCHMQKKDYDAAKEDLGKLLTIAPRYTRAYLMRGEVSLQQKDTAQALQDF 181

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAE-----EAHLK------------------- 542
              + +D+ +   +    +     G+YK+AE       HL                    
Sbjct: 182 DKAIAMDRYDPDGWGARAVVRIQQGKYKEAEADLDQSIHLSVRNAGNYINRALARFHQNN 241

Query: 543 ----------AIQLD-RNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYH 589
                     A+ +D  NFL   GH  +      + +  +A+E    VL I+     A  
Sbjct: 242 LRGAMSDYDLALDIDPNNFL---GHYNRGLLRAQVGDDNRAIEDFDFVLKIEPDNMMAAF 298

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            RG+L    G ++ AI D S  +   P+ +   Y RA     IG+ + A +D    + ++
Sbjct: 299 NRGILRAQTGDYRGAISDYSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQDEFKIMKMQ 358

Query: 650 LD 651
           +D
Sbjct: 359 ID 360



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 9/236 (3%)

Query: 458 ARAAL--GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           AR AL   + V +IQ  ++ +  +P   +    RG+      D+  A  D  A ++ +  
Sbjct: 29  ARNALYFEDYVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPF 88

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   GLA     ++  A E +  AI+ D   +  W +L+  +    + + A E L 
Sbjct: 89  VVGAYQIRGLARIRQNKFDGAIEDYKTAIKYDPENVVLWHNLSLCHMQKKDYDAAKEDLG 148

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           ++L I  R+++AY +RG +        +A++D    + +D  + +    RA      G+Y
Sbjct: 149 KLLTIAPRYTRAYLMRGEVSLQQKDTAQALQDFDKAIAMDRYDPDGWGARAVVRIQQGKY 208

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +EA  D D ++ L + +   ++ + LA + +       + +      +D+  DIDP
Sbjct: 209 KEAEADLDQSIHLSVRNAGNYINRALARFHQ-------NNLRGAMSDYDLALDIDP 257



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 76/172 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +   A A+  FD+ +  D   P+    R   R  Q + + A +D  ++I  
Sbjct: 162 LMRGEVSLQQKDTAQALQDFDKAIAMDRYDPDGWGARAVVRIQQGKYKEAEADLDQSIHL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SVRNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           D    +K++ +N  A    G+  +  G+Y+ A   + K I    NF+  + H
Sbjct: 282 DFDFVLKIEPDNMMAAFNRGILRAQTGDYRGAISDYSKVIDEYPNFMAGYYH 333



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 41/80 (51%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D +++  P +      RG   +  ++  AA++D+ +A++ +P   EA+  RG     LG
Sbjct: 595 LDHVIQLAPDFVYGYYNRGNVLSMLKDYRAALADYNKALELSPDFAEAYFNRGLTHIFLG 654

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            + + I DLSKA E    SA
Sbjct: 655 NNKQGIADLSKAGELGIVSA 674



 Score = 43.1 bits (100), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   ++ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKI 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AI D SK ++  PN     + R     K  D   A +
Sbjct: 290 EPDNMMAAFNRGILRAQTGDYRGAISDYSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQ 349

Query: 505 DLSACVKL--DKEN 516
           D    +K+  DK N
Sbjct: 350 DEFKIMKMQIDKRN 363



 Score = 39.7 bits (91), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 31/167 (18%)

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           +P  A     RG+  +  +DF ++++D +  + LD     AY    L      EY+KAE 
Sbjct: 505 DPQDAKKRFMRGLDFYLVQDFASSIDDFTQSILLDGTFFPAYFMRALVRYKQLEYQKAEA 564

Query: 539 AHLKA-----------------------------IQLDRNFLEAWGHLTQFYQDLANSEK 569
           A  +                              IQL  +F+  + +       L +   
Sbjct: 565 AMSEGATSGAAAEIKKPESQAMDYEIVKNDLDHVIQLAPDFVYGYYNRGNVLSMLKDYRA 624

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           AL    + L +   F++AY  RGL    LG +K+ I DLS    LGI
Sbjct: 625 ALADYNKALELSPDFAEAYFNRGLTHIFLGNNKQGIADLSKAGELGI 671


>gi|432330743|ref|YP_007248886.1| TPR repeat-containing protein [Methanoregula formicicum SMSP]
 gi|432137452|gb|AGB02379.1| TPR repeat-containing protein [Methanoregula formicicum SMSP]
          Length = 318

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 2/281 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S+G+A    G++  A+  F + L+ DP +  A +GRG A   Q   E  I    +AI  +
Sbjct: 19  SKGLALGRSGQHKEALEAFTRALEADPSFAPAWVGRGFALGKQGRYEEEIECCEKAIALD 78

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW  RG A   L    E I    + L  +P +A   + +G+           V  
Sbjct: 79  PHNVDAWNNRGFACGMLARFEEKIHCCEQTLALDPENATAWNNKGVALGMLGRHEGEVSC 138

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + +     SA+   G AL  +  Y++    + +A+++   FL A  +    +  L 
Sbjct: 139 CDRALAVRPRYLSAWVNKGFALGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLK 198

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC-LYL 624
               A+E L + L ID   +KA + +GL L  +G+H +AI  L   L IDP+  +  + L
Sbjct: 199 EYRDAIETLDRALSIDPAHAKALYRKGLTLSLMGRHSEAIPVLEKALEIDPAIADAWVVL 258

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
             SC+   G   E+ + +D A  +++  +   +++ ++  +
Sbjct: 259 SNSCF-LTGRLEESARAFDMAYYIDVKDVRTGLVKGMSLLK 298



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 96/235 (40%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +VD   +RG A     ++   I   +Q L  DP    A   +G A       E  +S   
Sbjct: 81  NVDAWNNRGFACGMLARFEEKIHCCEQTLALDPENATAWNNKGVALGMLGRHEGEVSCCD 140

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            A+   P    AW  +G A   L    E I    +AL+  P     L  +G+ +   K++
Sbjct: 141 RALAVRPRYLSAWVNKGFALGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLKEY 200

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+E L   + +D  +  A    GL LS +G + +A     KA+++D    +AW  L+ 
Sbjct: 201 RDAIETLDRALSIDPAHAKALYRKGLTLSLMGRHSEAIPVLEKALEIDPAIADAWVVLSN 260

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                   E++        YID +  +   ++G+ L   G+   A+   S  LGI
Sbjct: 261 SCFLTGRLEESARAFDMAYYIDVKDVRTGLVKGMSLLKNGKVDDALHAFSEVLGI 315



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 5/163 (3%)

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
           KE+   Y   GLAL   G++K+A EA  +A++ D +F  AW             E+ +EC
Sbjct: 11  KEDCRKYYSKGLALGRSGQHKEALEAFTRALEADPSFAPAWVGRGFALGKQGRYEEEIEC 70

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
            ++ + +D     A++ RG     L + ++ I      L +DP N      +      +G
Sbjct: 71  CEKAIALDPHNVDAWNNRGFACGMLARFEEKIHCCEQTLALDPENATAWNNKGVALGMLG 130

Query: 634 EYREAIKDYDAALDLELDSM-----EKFVLQCLAFYQKEIALY 671
            +   +   D AL +    +     + F L  L  Y++EIA Y
Sbjct: 131 RHEGEVSCCDRALAVRPRYLSAWVNKGFALGKLKRYEEEIACY 173



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 46  LCSLRNWSKAIRILD-SLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L  L+ + + I   D +L    + +  + N+   +  L+ ++  I   D+AL +DP   +
Sbjct: 160 LGKLKRYEEEIACYDRALKIYPFFLSALVNKGVAHIHLKEYRDAIETLDRALSIDPAHAK 219

Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
           A   KG   S +GR  EA+ V EK  E
Sbjct: 220 ALYRKGLTLSLMGRHSEAIPVLEKALE 246



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 40/84 (47%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R  K     +   +++G+A ++  +Y  AI   D+ L  DP + +AL  +G   +  
Sbjct: 172 CYDRALKIYPFFLSALVNKGVAHIHLKEYRDAIETLDRALSIDPAHAKALYRKGLTLSLM 231

Query: 429 RELEAAISDFTEAIQSNPSAGEAW 452
                AI    +A++ +P+  +AW
Sbjct: 232 GRHSEAIPVLEKALEIDPAIADAW 255


>gi|296447504|ref|ZP_06889427.1| peptidase C14 caspase catalytic subunit p20 [Methylosinus
           trichosporium OB3b]
 gi|296254971|gb|EFH02075.1| peptidase C14 caspase catalytic subunit p20 [Methylosinus
           trichosporium OB3b]
          Length = 677

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/275 (24%), Positives = 127/275 (46%), Gaps = 28/275 (10%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R  ++++ +V+    RG  Q+++ +Y +AI  F++ L  D  Y +A + RG A  F+R+ 
Sbjct: 132 RGEQNRAQAVELYNLRGATQIDKDEYDTAIGDFNKALAIDRNYVDAYVNRGHAYTFKRDF 191

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           + AI+DF +A++  P     +  R  AR    +   A+ D  +A++ +P +A +   RG 
Sbjct: 192 DKAIADFDQAVRLKPRDAFGYAARAMARMGKADFTGAVADYDRAIKLDPQNAKLYTSRGE 251

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                 D  ++++D    + L K ++  Y    L L  I          LK+        
Sbjct: 252 AWRLQGDLESSLQDHDKALSL-KPSEEVYNNRALTLKDIA---------LKS-------- 293

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
                     +D+   ++A     + + ++  F+  Y  RGL+    G  + ++ DL   
Sbjct: 294 ----------KDVTKLDEARNDCSEAILLNPSFAVPYTNRGLIRRLAGDLRGSLLDLDKA 343

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           +G+   ++E L  R   Y AIG+   A++DYD A+
Sbjct: 344 IGLAQRSMEALTFRGDTYRAIGDLDRALQDYDEAI 378



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 21/258 (8%)

Query: 429 RELEAAISDFTEAIQSN----PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           R  +AAI   T  + S       A EA+ +RG A+A +G+   A++DL+ AL+  P    
Sbjct: 42  RNPDAAIPACTRLLVSGKLTEAEAAEAYGQRGIAKAGMGDLDGALKDLTAALDRNPKMLV 101

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVK--LDKENKSA-----YTYLGLALSSIGEYKKAE 537
            L  RG    +    + A+ D S  ++  L  E   A     Y   G       EY  A 
Sbjct: 102 ALKLRGKAYKELNHLDLAIADFSRALRDALRGEQNRAQAVELYNLRGATQIDKDEYDTAI 161

Query: 538 EAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
               KA+ +DRN+++A+   GH   F +D    +KA+    Q + +  R +  Y  R + 
Sbjct: 162 GDFNKALAIDRNYVDAYVNRGHAYTFKRDF---DKAIADFDQAVRLKPRDAFGYAARAMA 218

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL----EL 650
             G      A+ D    + +DP N +    R   +   G+   +++D+D AL L    E+
Sbjct: 219 RMGKADFTGAVADYDRAIKLDPQNAKLYTSRGEAWRLQGDLESSLQDHDKALSLKPSEEV 278

Query: 651 DSMEKFVLQCLAFYQKEI 668
            +     L+ +A   K++
Sbjct: 279 YNNRALTLKDIALKSKDV 296


>gi|167041835|gb|ABZ06576.1| putative TPR domain protein [uncultured marine microorganism
           HF4000_097M14]
          Length = 503

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 113/233 (48%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           ++K K+++     +  I    +     A  ++ + LK +P + E +   G+  A     +
Sbjct: 1   MNKKKNLTTKETFALAIQNHQKNNLQVAEKLYKETLKTNPNHIETIFLLGSLSAQTNNFD 60

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            A   F + IQ NP+   A    G A   LGE  +AI    KA++  PN A+  +  GI 
Sbjct: 61  KAKKFFKKVIQINPNHVTAHNNLGAALKELGEQKKAIDCYQKAIQINPNYANAHYNLGIA 120

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             +  +   A+      ++++    +A+  LG+    +GE KKA   + KAIQ++ N + 
Sbjct: 121 FKELGELKKAIHCYQKAIQINPNYANAHYNLGIVFKELGELKKAIHCYQKAIQINPNHVA 180

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           A  +L   +++L   +KA+ C Q+ + I+     A++  GL+ +GL + KKAI
Sbjct: 181 AHNNLGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGLVFYGLSECKKAI 233



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 91/182 (50%)

Query: 407 ILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV 466
           +++ +P +  A    G A     E + AI  + +AIQ NP+   A    G A   LGE  
Sbjct: 69  VIQINPNHVTAHNNLGAALKELGEQKKAIDCYQKAIQINPNYANAHYNLGIAFKELGELK 128

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           +AI    KA++  PN A+  +  GIV  +  +   A+      ++++  + +A+  LG+ 
Sbjct: 129 KAIHCYQKAIQINPNYANAHYNLGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGIV 188

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
              +GE KKA   + KAIQ++ N + A  +L   +  L+  +KA+ C ++ + I   +S 
Sbjct: 189 FKELGELKKAIHCYQKAIQINPNHVAAHNNLGLVFYGLSECKKAIGCYKKAIQIQSNYSD 248

Query: 587 AY 588
           AY
Sbjct: 249 AY 250



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 3/200 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A    G+   AI  + + ++ +P Y  A    G A     EL+ AI  + +AIQ NP+
Sbjct: 84  GAALKELGEQKKAIDCYQKAIQINPNYANAHYNLGIAFKELGELKKAIHCYQKAIQINPN 143

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A    G     LGE  +AI    KA++  PN     +  GIV  +  +   A+    
Sbjct: 144 YANAHYNLGIVFKELGELKKAIHCYQKAIQINPNHVAAHNNLGIVFKELGELKKAIHCYQ 203

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++++  + +A+  LGL    + E KKA   + KAIQ+  N+ +A+ +L     D+   
Sbjct: 204 KAIQINPNHVAAHNNLGLVFYGLSECKKAIGCYKKAIQIQSNYSDAYWNLHSLASDI--- 260

Query: 568 EKALECLQQVLYIDKRFSKA 587
           ++AL  L+++   D +F KA
Sbjct: 261 DEALTILKKLYEFDNKFIKA 280



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 99/189 (52%)

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L+  PN  + +   G ++ +  +F+ A +     ++++  + +A+  LG AL  +GE KK
Sbjct: 36  LKTNPNHIETIFLLGSLSAQTNNFDKAKKFFKKVIQINPNHVTAHNNLGAALKELGEQKK 95

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A + + KAIQ++ N+  A  +L   +++L   +KA+ C Q+ + I+  ++ A++  G++ 
Sbjct: 96  AIDCYQKAIQINPNYANAHYNLGIAFKELGELKKAIHCYQKAIQINPNYANAHYNLGIVF 155

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
             LG+ KKAI      + I+P+++         +  +GE ++AI  Y  A+ +  + +  
Sbjct: 156 KELGELKKAIHCYQKAIQINPNHVAAHNNLGIVFKELGELKKAIHCYQKAIQINPNHVAA 215

Query: 656 FVLQCLAFY 664
                L FY
Sbjct: 216 HNNLGLVFY 224


>gi|404475555|ref|YP_006706986.1| hypothetical protein B2904_orf895 [Brachyspira pilosicoli B2904]
 gi|404437044|gb|AFR70238.1| TPR domain-containing protein [Brachyspira pilosicoli B2904]
          Length = 318

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 82/320 (25%), Positives = 144/320 (45%), Gaps = 39/320 (12%)

Query: 302 NGTHDVHDKLSSDSASLND--SNTNSESYSK-SSISDNKSSDSTESRSKLSFKWDMLKET 358
           N   ++  +L+      ND  +N ++E+YS     +D   + + E    +S K   +   
Sbjct: 18  NKLENLQKELNKCVEKFNDFLNNIDAENYSDFDDFNDIAKAFNEELNKIMSDKKHFIVSF 77

Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           +N     K+  + R++       D+  S+GI +   G+YA AI  +D+ +K +P   +A 
Sbjct: 78  TNIVDNEKEVDIDRLNNLTDYH-DYN-SKGIYKSANGEYAEAIKYYDEAIKLNPNMADAY 135

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
             +  A+     L+ AI ++ +AI+       A+  RG  ++ LG   EAI+D  KAL  
Sbjct: 136 YNKAIAKTKLVLLKEAIEEYDKAIELRADYTYAYYNRGLLKSDLGLLEEAIKDFDKALSI 195

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           +PN  D  + +G++  +   +  A++D +  +KL+     AY   G+A   +G+YK+A E
Sbjct: 196 DPNLFDAYNNKGLLEDELGFYKEAIKDFNKAIKLNPNYALAYNNRGIAKDELGQYKEAIE 255

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
            + KAI+L+ N                            LY D         RG +    
Sbjct: 256 DYDKAIELEPN-------------------------TAYLYND---------RGWVKKNA 281

Query: 599 GQHKKAIKDLSSGLGIDPSN 618
           G +K+A+KD    L +DP N
Sbjct: 282 GLYKEALKDYKKALELDPDN 301



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 17/246 (6%)

Query: 424 ARAFQRELEAAISD-------FTEAIQS----------NPSAGEAWKRRGQARAALGESV 466
           A+AF  EL   +SD       FT  + +          N +    +  +G  ++A GE  
Sbjct: 56  AKAFNEELNKIMSDKKHFIVSFTNIVDNEKEVDIDRLNNLTDYHDYNSKGIYKSANGEYA 115

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           EAI+   +A++  PN AD  + + I   K      A+E+    ++L  +   AY   GL 
Sbjct: 116 EAIKYYDEAIKLNPNMADAYYNKAIAKTKLVLLKEAIEEYDKAIELRADYTYAYYNRGLL 175

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
            S +G  ++A +   KA+ +D N  +A+ +      +L   ++A++   + + ++  ++ 
Sbjct: 176 KSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKEAIKDFNKAIKLNPNYAL 235

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           AY+ RG+    LGQ+K+AI+D    + ++P+       R       G Y+EA+KDY  AL
Sbjct: 236 AYNNRGIAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKDYKKAL 295

Query: 647 DLELDS 652
           +L+ D+
Sbjct: 296 ELDPDN 301



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 46/134 (34%), Positives = 73/134 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ + + G    AI  FD+ L  DP   +A   +G         + AI DF +AI+ N
Sbjct: 171 NRGLLKSDLGLLEEAIKDFDKALSIDPNLFDAYNNKGLLEDELGFYKEAIKDFNKAIKLN 230

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  RG A+  LG+  EAI+D  KA+E EPN+A + ++RG V      +  A++D
Sbjct: 231 PNYALAYNNRGIAKDELGQYKEAIEDYDKAIELEPNTAYLYNDRGWVKKNAGLYKEALKD 290

Query: 506 LSACVKLDKENKSA 519
               ++LD +N+ A
Sbjct: 291 YKKALELDPDNEYA 304


>gi|380695034|ref|ZP_09859893.1| hypothetical protein BfaeM_13887 [Bacteroides faecis MAJ27]
          Length = 672

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 120/261 (45%), Gaps = 8/261 (3%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D  EAI+ NP    A++ RG
Sbjct: 29  YVLSIQYFNQVINAKPYLYEPYFFRALAKVNLEDYQGAEADCNEAIKRNPFVVGAYQVRG 88

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD++AA EDL + +K+    
Sbjct: 89  LARIRQNKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSPRY 148

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLK----AIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
             AY   G     +   +K   A LK    A++LD+   +AW          AN  +A  
Sbjct: 149 TRAYLMRG----EVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQANYAEAEA 204

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
            L + +++  + +  Y  R L        + A+ D    L IDP+N    Y R      +
Sbjct: 205 DLDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARV 264

Query: 633 GEYREAIKDYDAALDLELDSM 653
           G+   AI+D+D  + +E D+M
Sbjct: 265 GDDNRAIEDFDFVIQMEPDNM 285



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ +  YA A +  D+ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 188 ARAIVRLQQANYAEAEADLDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 247

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  R ++  +  D+  A++D
Sbjct: 248 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKD 307

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y +   A   IG+ K AE+   K +  QLD+
Sbjct: 308 YTTVIDQYPNFLAGYYHRAEARKKIGDKKGAEQDDFKLLKAQLDK 352



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/263 (22%), Positives = 102/263 (38%), Gaps = 34/263 (12%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           ++ + +  Y +A    + +LK  P Y  A + RG     Q++  AA+ DF  A++ +   
Sbjct: 123 LSHIQKKDYDAAKEDLESLLKVSPRYTRAYLMRGEVSLQQKDTVAALKDFNTALELDKYD 182

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +AW  R   R       EA  DL +A+     +A     R +  F   +   A+ D   
Sbjct: 183 PDAWSARAIVRLQQANYAEAEADLDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDL 242

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + +D  N   +   GL  + +G+  +A E     IQ++ + + A  +            
Sbjct: 243 ALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQMEPDNMMAIFN------------ 290

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
                                 R LL    G ++ AIKD ++ +   P+ +   Y RA  
Sbjct: 291 ----------------------RALLRAQTGDYRGAIKDYTTVIDQYPNFLAGYYHRAEA 328

Query: 629 YHAIGEYREAIKDYDAALDLELD 651
              IG+ + A +D    L  +LD
Sbjct: 329 RKKIGDKKGAEQDDFKLLKAQLD 351



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 9/236 (3%)

Query: 458 ARAAL--GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           AR AL   + V +IQ  ++ +  +P   +    R +     +D+  A  D +  +K +  
Sbjct: 20  ARNALYFEDYVLSIQYFNQVINAKPYLYEPYFFRALAKVNLEDYQGAEADCNEAIKRNPF 79

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   GLA     ++  A E + KA+  D   +  W +LT  +    + + A E L+
Sbjct: 80  VVGAYQVRGLARIRQNKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLE 139

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            +L +  R+++AY +RG +         A+KD ++ L +D  + +    RA        Y
Sbjct: 140 SLLKVSPRYTRAYLMRGEVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQANY 199

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
            EA  D D A+ L   +   ++ + LA + +       + +      +D+  DIDP
Sbjct: 200 AEAEADLDRAIHLSAKNAGNYINRALARFHQ-------NNLRGAMSDYDLALDIDP 248



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 38/80 (47%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AIQ  P   +A+  RG     LG
Sbjct: 581 LDKVITLAPDFVYAYYNRANVAAMLKDYRAAIVDYDKAIQLAPDFADAYFNRGLTHIFLG 640

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            +   I DLSKA E    SA
Sbjct: 641 NNKAGISDLSKAGELGVVSA 660



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 2/137 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   IQ 
Sbjct: 221 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQM 280

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   R   RA  G+   AI+D +  ++  PN     + R     K  D   A +
Sbjct: 281 EPDNMMAIFNRALLRAQTGDYRGAIKDYTTVIDQYPNFLAGYYHRAEARKKIGDKKGAEQ 340

Query: 505 DLSACVK--LDKENKSA 519
           D    +K  LDK+N  A
Sbjct: 341 DDFKLLKAQLDKQNGVA 357


>gi|67458702|ref|YP_246326.1| hypothetical protein RF_0310 [Rickettsia felis URRWXCal2]
 gi|67004235|gb|AAY61161.1| Tetratricopeptide repeat domain containing protein [Rickettsia
           felis URRWXCal2]
          Length = 706

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 129/268 (48%), Gaps = 2/268 (0%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           ++F   +G       KY  AI   D+I++ D + P     +G+     ++ E AI  F  
Sbjct: 212 IEFYHKKGWILSELYKYDEAIECCDKIIEIDSLEPYGYFNKGSMLRLNKKYEEAIEAFNM 271

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI   P+  E +  +G+    L    EA+++ +KA++FEP+ +   + +G   ++ K++ 
Sbjct: 272 AINLMPTEAELYYLKGRCLYELKRYKEAVKEFNKAIKFEPDISSYYY-KGQALYRLKEYK 330

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+E  +  +   + +   Y +  L+L  +  Y++A E   +A+++D           Q 
Sbjct: 331 KAIEAYNHALSYPQYDNYTYYFKALSLKKLERYEEAIEVFNEALKIDSKDERTLSAKGQV 390

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
             +L   E+A++   + + ID +   A + +G  L  L ++++AIK     + IDP N  
Sbjct: 391 LNELMRYEEAIKVFDKAIRIDPKNRNAIYAKGEALAKLMRYEEAIKAFDKTIRIDP-NYW 449

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
             Y +   Y+ + +Y+ AI  ++  ++L
Sbjct: 450 KPYAKGWVYNRLAKYKNAINYFNKVIEL 477



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 134/307 (43%), Gaps = 38/307 (12%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D    + +  + E KY +AI  FD++L +DP    A   +  A      +E A+     
Sbjct: 8   LDKNFDKALLCLEEEKYETAIKYFDKVLNQDPFLSSAYSNKAFALKQLCRIEEALEVLDT 67

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH--ERGIVNFKFKD 498
           AI+ NP     +  RG   + LG   EAI+   +AL+ +  S D+L    +G     +  
Sbjct: 68  AIKINPKISGYYDNRGIVLSILGLYEEAIKSYDQALKLD--SLDVLTFINKGWTLNNWGK 125

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  A+  L   ++LD  +  AY    ++L  +G++ +    + KA++++ N+ E +    
Sbjct: 126 YRKALSVLDKAIELDPTDIKAYANKAISLEKLGKFDEMVHMYNKALEINPNYSELYFDRA 185

Query: 559 QFYQDLANSEKAL----------------------------------ECLQQVLYIDKRF 584
           +   D+   EKAL                                  EC  +++ ID   
Sbjct: 186 KALIDIGEKEKALIDINKAIEINPNEIEFYHKKGWILSELYKYDEAIECCDKIIEIDSLE 245

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
              Y  +G +L    ++++AI+  +  + + P+  E  YL+  C + +  Y+EA+K+++ 
Sbjct: 246 PYGYFNKGSMLRLNKKYEEAIEAFNMAINLMPTEAELYYLKGRCLYELKRYKEAVKEFNK 305

Query: 645 ALDLELD 651
           A+  E D
Sbjct: 306 AIKFEPD 312



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 129/274 (47%), Gaps = 39/274 (14%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K  S+ V   +++G    N GKY  A+S+ D+ ++ DP   +A   +  +     + +  
Sbjct: 104 KLDSLDVLTFINKGWTLNNWGKYRKALSVLDKAIELDPTDIKAYANKAISLEKLGKFDEM 163

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           +  + +A++ NP+  E +  R +A   +GE  +A+ D++KA+E  PN  +  H++G +  
Sbjct: 164 VHMYNKALEINPNYSELYFDRAKALIDIGEKEKALIDINKAIEINPNEIEFYHKKGWI-- 221

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
                                           LS + +Y +A E   K I++D   LE +
Sbjct: 222 --------------------------------LSELYKYDEAIECCDKIIEIDS--LEPY 247

Query: 555 GHLTQFYQDLANS--EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           G+  +      N   E+A+E     + +    ++ Y+L+G  L+ L ++K+A+K+ +  +
Sbjct: 248 GYFNKGSMLRLNKKYEEAIEAFNMAINLMPTEAELYYLKGRCLYELKRYKEAVKEFNKAI 307

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
             +P +I   Y +    + + EY++AI+ Y+ AL
Sbjct: 308 KFEP-DISSYYYKGQALYRLKEYKKAIEAYNHAL 340



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 11/260 (4%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK-- 453
           +Y  AI +FD+ ++ DP    A+  +G A A     E AI  F + I+ +P+    WK  
Sbjct: 396 RYEEAIKVFDKAIRIDPKNRNAIYAKGEALAKLMRYEEAIKAFDKTIRIDPNY---WKPY 452

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            +G     L +   AI   +K +E     A   +E  + ++  K +  A+ +    ++L 
Sbjct: 453 AKGWVYNRLAKYKNAINYFNKVIELGKAEAYTYYEIALASYNLKRYKTAIINYDKAIELG 512

Query: 514 KE----NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDLANSE 568
            +      S Y+  G  L +I  Y+ A E++ K I+LD  N++  +        +L   E
Sbjct: 513 IKALDLKVSTYSTKGDCLYNIKNYEAALESYNKVIELDPANYVHYYDKAYTL-DNLKRYE 571

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +ALE   +V+ ++  +S AY  +  +   L ++ KAI   +  L I   +    Y +   
Sbjct: 572 EALENYDKVILLNPSYSSAYINKADIFCKLKKYPKAIDCSNQALAIVTDDDAAYYNKGLA 631

Query: 629 YHAIGEYREAIKDYDAALDL 648
              + +Y E I++ D ++ L
Sbjct: 632 LIKLQQYEEGIENLDKSIKL 651



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 96/224 (42%), Gaps = 38/224 (16%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
            KY +AI+ F+++++         +G+  A  +    E A++ +                
Sbjct: 462 AKYKNAINYFNKVIE---------LGKAEAYTYY---EIALASYN--------------- 494

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADI----LHERGIVNFKFKDFNAAVEDLSACV 510
                  L     AI +  KA+E    + D+       +G   +  K++ AA+E  +  +
Sbjct: 495 -------LKRYKTAIINYDKAIELGIKALDLKVSTYSTKGDCLYNIKNYEAALESYNKVI 547

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           +LD  N   Y      L ++  Y++A E + K I L+ ++  A+ +    +  L    KA
Sbjct: 548 ELDPANYVHYYDKAYTLDNLKRYEEALENYDKVILLNPSYSSAYINKADIFCKLKKYPKA 607

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           ++C  Q L I      AY+ +GL L  L Q+++ I++L   + +
Sbjct: 608 IDCSNQALAIVTDDDAAYYNKGLALIKLQQYEEGIENLDKSIKL 651


>gi|425466451|ref|ZP_18845749.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9809]
 gi|389831011|emb|CCI26579.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9809]
          Length = 707

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 3/264 (1%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEAAISDFTEAIQSNP-SAGEAWK 453
           +Y  A++ +DQ LK +P Y EA  G+  A  A QR  EA I  + +AIQ NP SA  AW 
Sbjct: 347 RYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALII-YEKAIQINPDSAWPAWL 405

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RGQA   LG++ EA++   + L   P ++     +  +  + + ++AA + L   +   
Sbjct: 406 GRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQ 465

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
           + +   +   G +L ++ +Y+ A +A+ +A+ L+ +    W         L     ALE 
Sbjct: 466 QNDAKTWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALES 525

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             +    + +FS+A++ +G++L  L +  +A++  +     + +  +    + +  H + 
Sbjct: 526 YSKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATKANSNYYQAWLNQGALLHQME 585

Query: 634 EYREAIKDYDAALDLELDSMEKFV 657
            ++EAI  Y+ A  +     E F+
Sbjct: 586 RFQEAIASYEKARRISSQKAEVFI 609



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 7/263 (2%)

Query: 396 KYASAISIFDQILKEDP--MYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +Y+ A+ I+++ ++ +P   +P A +GRG A     + + A+  F   +  NP+A +AW+
Sbjct: 381 RYSEALIIYEKAIQINPDSAWP-AWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQ 439

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            +      L +   A + L K L F+ N A   +++G      +D+  AV+     + L+
Sbjct: 440 GKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALALE 499

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKAL 571
            +N   +   G +L  + +   A E++ KA Q +  F +A  H +Q    Q L    +AL
Sbjct: 500 SDNALIWYQKGNSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLDRKSEAL 557

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           E   Q    +  + +A+  +G LLH + + ++AI        I     E      + ++ 
Sbjct: 558 EAFTQATKANSNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYR 617

Query: 632 IGEYREAIKDYDAALDLELDSME 654
           +G+Y +AI  Y  A+  + D+ E
Sbjct: 618 LGDYSQAINAYQQAIQRQKDNPE 640



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 8/210 (3%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +++G   ++ K +  A+      +K++ +   A+     AL ++  Y +A   + KAIQ+
Sbjct: 336 YQQGQTFYQLKRYTDALNYYDQALKINPDYLEAFQGKADALLALQRYSEALIIYEKAIQI 395

Query: 547 DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           + +    AW    Q    L  +++ALE  ++VL ++   S+A+  +  +   L Q+  A 
Sbjct: 396 NPDSAWPAWLGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQ 455

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           K L   L    ++ +  Y +      + +Y  A+K YD AL LE D+        L +YQ
Sbjct: 456 KALDKLLTFQQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALALESDN-------ALIWYQ 508

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           K  +LY  +KIN     +   G  +P F +
Sbjct: 509 KGNSLYQLNKINDALESYSKAGQFNPQFSQ 538



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 53/262 (20%), Positives = 106/262 (40%), Gaps = 34/262 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A    GK   A+  F+++L  +P   +A  G+       ++  AA     + +  
Sbjct: 405 LGRGQALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 464

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             +  + W ++G +   L +   A++   +AL  E ++A I +++G   ++    N A+E
Sbjct: 465 QQNDAKTWYKKGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALE 524

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
             S   + + +   A+   G+ L  +    +A EA  +A + + N+ +AW         +
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALEAFTQATKANSNYYQAWLNQGALLHQM 584

Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
            +F + +A+ EKA                           +   QQ +   K   + +  
Sbjct: 585 ERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAINAYQQAIQRQKDNPETWKS 644

Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
            G     LGQ+++AI+     L
Sbjct: 645 LGNSCFKLGQYERAIQAYQESL 666



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 67/140 (47%), Gaps = 2/140 (1%)

Query: 411 DPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
           +P + +A   +G   +   R+ EA +  FT+A ++N +  +AW  +G     +    EAI
Sbjct: 533 NPQFSQAHYSQGIILQKLDRKSEA-LEAFTQATKANSNYYQAWLNQGALLHQMERFQEAI 591

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
               KA       A++    G   ++  D++ A+      ++  K+N   +  LG +   
Sbjct: 592 ASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAINAYQQAIQRQKDNPETWKSLGNSCFK 651

Query: 530 IGEYKKAEEAHLKAIQLDRN 549
           +G+Y++A +A+ ++++   N
Sbjct: 652 LGQYERAIQAYQESLRYRSN 671



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 10/200 (5%)

Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
           LN  N   ESYSK+   + + S +  S+  +  K D   E             T+ +K+ 
Sbjct: 516 LNKINDALESYSKAGQFNPQFSQAHYSQGIILQKLDRKSEALE--------AFTQATKAN 567

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S      L++G       ++  AI+ +++  +      E  IG G A     +   AI+ 
Sbjct: 568 SNYYQAWLNQGALLHQMERFQEAIASYEKARRISSQKAEVFIGIGNAWYRLGDYSQAINA 627

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +AIQ      E WK  G +   LG+   AIQ   ++L +  N  ++  ++ +   +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSCFKLGQYERAIQAYQESLRYRSNDREVQTQKQLAETRWQ 687

Query: 498 DFNAAVEDLSACVKLDKENK 517
           +   + ++ +   K+D E +
Sbjct: 688 ELQQSSQNQTP--KVDSEEQ 705


>gi|423306041|ref|ZP_17284040.1| hypothetical protein HMPREF1072_02980 [Bacteroides uniformis
           CL03T00C23]
 gi|423309414|ref|ZP_17287404.1| hypothetical protein HMPREF1073_02154 [Bacteroides uniformis
           CL03T12C37]
 gi|392679598|gb|EIY72978.1| hypothetical protein HMPREF1072_02980 [Bacteroides uniformis
           CL03T00C23]
 gi|392685093|gb|EIY78412.1| hypothetical protein HMPREF1073_02154 [Bacteroides uniformis
           CL03T12C37]
          Length = 686

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 114/257 (44%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    RG A+    + + A SD   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +  EAI+D   A++++P +  + H   + + + +D+ AA EDL   + +    
Sbjct: 98  LARIRQNKFDEAIEDYKTAIKYDPENVVLWHNLSLCHIQKEDYEAAKEDLGTLLTIAPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +  +A     KAI +DR   + WG            ++A   L Q
Sbjct: 158 TRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQ 217

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            +++  + +  Y  R L        + A+ D    L IDP+N    Y R      +G+  
Sbjct: 218 SIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDN 277

Query: 637 EAIKDYDAALDLELDSM 653
            AI+D+D  L +E D+M
Sbjct: 278 RAIEDFDFVLKMEPDNM 294



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ +GKY  A +  DQ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    L+ EP++      RG++  +  D+  A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            S  +       + Y     A   IG++K AE+   K +++
Sbjct: 317 YSKVIAEYPNFMAGYYQRAEARKKIGDHKGAEQDEFKIMKM 357



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 9/236 (3%)

Query: 458 ARAAL--GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           AR AL   + V +IQ  ++ +  +P   +    RG+      D+  A  D  A ++ +  
Sbjct: 29  ARNALYFEDYVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPF 88

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   GLA     ++ +A E +  AI+ D   +  W +L+  +    + E A E L 
Sbjct: 89  VVGAYQIRGLARIRQNKFDEAIEDYKTAIKYDPENVVLWHNLSLCHIQKEDYEAAKEDLG 148

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            +L I  R+++AY +RG +        +A++D    + +D  + +    RA      G+Y
Sbjct: 149 TLLTIAPRYTRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKY 208

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +EA  D D ++ L   +   ++ + LA + +       + +      +D+  DIDP
Sbjct: 209 KEAEADLDQSIHLSAKNAGNYINRALARFHQ-------NNLRGAMSDYDLALDIDP 257



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 74/170 (43%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +     A+  FD+ +  D   P+    R   R  Q + + A +D  ++I  
Sbjct: 162 LMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQSIHL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A   + K I    NF+  +
Sbjct: 282 DFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGY 331



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 97/263 (36%), Gaps = 34/263 (12%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           +  + +  Y +A      +L   P Y  A + RG     Q +   A+ DF +AI  +   
Sbjct: 132 LCHIQKEDYEAAKEDLGTLLTIAPRYTRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYD 191

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            + W  R   R   G+  EA  DL +++     +A     R +  F   +   A+ D   
Sbjct: 192 PDGWGARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDL 251

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + +D  N   +   GL  + +G+                                    
Sbjct: 252 ALDIDPNNFLGHYNRGLLRAQVGD----------------------------------DN 277

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+E    VL ++     A   RGLL    G ++ AI D S  +   P+ +   Y RA  
Sbjct: 278 RAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEA 337

Query: 629 YHAIGEYREAIKDYDAALDLELD 651
              IG+++ A +D    + +++D
Sbjct: 338 RKKIGDHKGAEQDEFKIMKMQID 360



 Score = 48.1 bits (113), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD +LK +P    A   RG  RA   +   AISD+++ I   
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEY 324

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           P+    + +R +AR  +G+   A QD  K ++ +
Sbjct: 325 PNFMAGYYQRAEARKKIGDHKGAEQDEFKIMKMQ 358



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 40/80 (50%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D ++   P +      RG   +  ++  AA++D+ +AI+ +P   EA+  RG     LG
Sbjct: 595 LDHVILLAPDFVYGYYNRGNVSSLLKDYRAALADYDKAIELSPDFAEAYFNRGLTHIFLG 654

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            + + I DLSKA E    SA
Sbjct: 655 NNKQGIADLSKAGELGIVSA 674



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   ++ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AI D SK +   PN     ++R     K  D   A +
Sbjct: 290 EPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEARKKIGDHKGAEQ 349

Query: 505 DLSACVKL--DKEN 516
           D    +K+  DK N
Sbjct: 350 DEFKIMKMQIDKRN 363


>gi|71422459|ref|XP_812141.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70876885|gb|EAN90290.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 703

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 18/299 (6%)

Query: 370 VTRISKSKSIS----VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
           V  ++ S ++S     +    RG+A   +G Y  AI  +   L+ DP   +AL  RG   
Sbjct: 250 VPAVTSSSALSGNEEAELHQQRGLAYRKKGDYLRAIDEYSAALRLDPKNFKALFNRGFCN 309

Query: 426 AFQRELEAAISDFTEAIQSNP-------SAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
               +  AAI D+  A++  P       + G ++ R G      G   EAI    KA+  
Sbjct: 310 DKVEDYNAAIRDYEAAMKLEPGYAYTYYNLGISYDRWG------GHYKEAIAMFDKAIAL 363

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           + N+AD  H RG    K   +  AV+D +  + LD ++  AY         +GE   A  
Sbjct: 364 DGNNADFYHNRGFSQRKLGKYREAVKDYTMALSLDPQHFKAYYNRAFCYDKLGEGANAIA 423

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
            + KAI +  +   A+ +     +     + A+    + + +D      Y+ RG+     
Sbjct: 424 DYTKAIAIQDDNPNAYHNRGAAMEKAGRLDDAIADYTRAIQLDDGNPFTYNARGIAYDRR 483

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           G+   A++DL+  + + P+N      RA  +  +  + EA++DY+ +L L LD  ++F 
Sbjct: 484 GKSDAALQDLTQAIALSPNNPIFYQNRAFVFQNMERFPEAVRDYNISLAL-LDEEKRFA 541



 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 21/281 (7%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI++FD+ +  D    +    RG ++    +   A+ D+T A+  +P   +A+  
Sbjct: 348 GHYKEAIAMFDKAIALDGNNADFYHNRGFSQRKLGKYREAVKDYTMALSLDPQHFKAYYN 407

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R      LGE   AI D +KA+  + ++ +  H RG    K    + A+ D +  ++LD 
Sbjct: 408 RAFCYDKLGEGANAIADYTKAIAIQDDNPNAYHNRGAAMEKAGRLDDAIADYTRAIQLDD 467

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            N   Y   G+A    G+   A +   +AI L  N    + +    +Q++    +A+   
Sbjct: 468 GNPFTYNARGIAYDRRGKSDAALQDLTQAIALSPNNPIFYQNRAFVFQNMERFPEAVRDY 527

Query: 575 QQVLYI---DKRFS------------------KAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
              L +   +KRF+                  K Y  RG      G ++ AI D S+ + 
Sbjct: 528 NISLALLDEEKRFANGATSEGKATQELNLLILKQYFNRGFCYAREGHYEAAICDFSTVMA 587

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
            +P N+  LY R  C+  +G Y+ A++D+   ++L+ ++ E
Sbjct: 588 TNPDNLVALYNRGICHDKVGNYKLAVEDFSHLIELDAENAE 628



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 124/309 (40%), Gaps = 53/309 (17%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMY------------------------- 414
           + DF  +RG +Q   GKY  A+  +   L  DP +                         
Sbjct: 367 NADFYHNRGFSQRKLGKYREAVKDYTMALSLDPQHFKAYYNRAFCYDKLGEGANAIADYT 426

Query: 415 ---------PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
                    P A   RG A      L+ AI+D+T AIQ +      +  RG A    G+S
Sbjct: 427 KAIAIQDDNPNAYHNRGAAMEKAGRLDDAIADYTRAIQLDDGNPFTYNARGIAYDRRGKS 486

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
             A+QDL++A+   PN+      R  V    + F  AV D +  + L  E K        
Sbjct: 487 DAALQDLTQAIALSPNNPIFYQNRAFVFQNMERFPEAVRDYNISLALLDEEKR------F 540

Query: 526 ALSSIGEYKKAEEAHLKAIQ--LDRNFLEAW-GHLTQFYQDLANSEKALECLQQVLYIDK 582
           A  +  E K  +E +L  ++   +R F  A  GH           E A+     V+  + 
Sbjct: 541 ANGATSEGKATQELNLLILKQYFNRGFCYAREGHY----------EAAICDFSTVMATNP 590

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
               A + RG+    +G +K A++D S  + +D  N E  + R +   ++GEY  A+ DY
Sbjct: 591 DNLVALYNRGICHDKVGNYKLAVEDFSHLIELDAENAEAHFSRGTALESLGEYAMALDDY 650

Query: 643 DAALDLELD 651
             A  L++D
Sbjct: 651 AVAFKLDVD 659



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 113/289 (39%), Gaps = 73/289 (25%)

Query: 361 EAKRNKKFCVTRISKSKSISVDFRLS-------------RGIAQVNEGKYASAISIFDQI 407
           +A  N+ FC  ++ +  +   D+  +             RG A    G+   AI+ + + 
Sbjct: 403 KAYYNRAFCYDKLGEGANAIADYTKAIAIQDDNPNAYHNRGAAMEKAGRLDDAIADYTRA 462

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP--------------------- 446
           ++ D   P     RG A   + + +AA+ D T+AI  +P                     
Sbjct: 463 IQLDDGNPFTYNARGIAYDRRGKSDAALQDLTQAIALSPNNPIFYQNRAFVFQNMERFPE 522

Query: 447 -----------------------SAGEA-----------WKRRGQARAALGESVEAIQDL 472
                                  S G+A           +  RG   A  G    AI D 
Sbjct: 523 AVRDYNISLALLDEEKRFANGATSEGKATQELNLLILKQYFNRGFCYAREGHYEAAICDF 582

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           S  +   P++   L+ RGI + K  ++  AVED S  ++LD EN  A+   G AL S+GE
Sbjct: 583 STVMATNPDNLVALYNRGICHDKVGNYKLAVEDFSHLIELDAENAEAHFSRGTALESLGE 642

Query: 533 YKKAEEAHLKAIQL--DRNFLEAWGHLTQF---YQDLANSEKALECLQQ 576
           Y  A + +  A +L  DR+ L   G L +F   +  +  S++ L  L++
Sbjct: 643 YAMALDDYAVAFKLDVDRSDLVDEGDLAKFKSEHHAMVASQRVLRLLKE 691



 Score = 47.4 bits (111), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           A+ LRG+    L    KAI D ++ L IDPS+    Y RA+C++  G Y  AI DY+ A 
Sbjct: 88  AFFLRGVCHVKLSWIDKAIADFTAALDIDPSHSRSTYERAACHNRKGNYTAAILDYERA- 146

Query: 647 DLELDSM 653
            L+ DSM
Sbjct: 147 -LQHDSM 152


>gi|307152867|ref|YP_003888251.1| hypothetical protein Cyan7822_3021 [Cyanothece sp. PCC 7822]
 gi|306983095|gb|ADN14976.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
          Length = 846

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 145/325 (44%), Gaps = 31/325 (9%)

Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEG-------KYASAISIFDQ- 406
           L ET   + RN+ F         ++ V  +    +A +N G       ++  AI+ FDQ 
Sbjct: 266 LTETEVNSIRNQLF---------NLYVPIKKEDALAWINYGNQLFRLEEFEKAITAFDQA 316

Query: 407 --ILKEDPM--------YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
             +LK  P           +A   +G    F R+L  +  +F  AIQ +     AW+  G
Sbjct: 317 ITVLKSTPNPSSQTKQDLAKAYYAKGLTLWFTRDLSQSAQEFIHAIQQDDQFYSAWRWLG 376

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILH-ERGIVNFKFKDFNAAVEDLSACVKLDKE 515
                +    +A++  +K  E  P    +L+ ERG V      +  A+ D +  ++L K 
Sbjct: 377 YDLFLMRNYTDALKVYNKLFEMNPKGDFVLYTERGSVLAYSGHYQEAIADYNKAIEL-KP 435

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +  AY   GLA S + EY+KA     K I+L+ +   A+ +    Y+DL + +KAL    
Sbjct: 436 HPWAYNKRGLAYSELEEYQKAIADFNKTIELEPDADYAYNNRGNVYKDLKDYDKALADYN 495

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           +   I   +  AY+ RG L   L +++KA+ D + G+ ID  N      R   Y  + +Y
Sbjct: 496 KA--ISYNYVGAYNNRGNLYLDLKEYQKALADFNKGIEIDSENSLLYGNRGRVYSELKDY 553

Query: 636 REAIKDYDAALDLELDSMEKFVLQC 660
           ++A  DY  A+++  +    + L+ 
Sbjct: 554 KKAFDDYSKAIEINPNQSFYYTLRA 578



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 42/307 (13%)

Query: 382 DFRL--SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           DF L   RG      G Y  AI+ +++ ++  P +P A   RG A +   E + AI+DF 
Sbjct: 403 DFVLYTERGSVLAYSGHYQEAIADYNKAIELKP-HPWAYNKRGLAYSELEEYQKAIADFN 461

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           + I+  P A  A+  RG     L +  +A+ D +KA+ +  N     + RG +    K++
Sbjct: 462 KTIELEPDADYAYNNRGNVYKDLKDYDKALADYNKAISY--NYVGAYNNRGNLYLDLKEY 519

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN---------- 549
             A+ D +  +++D EN   Y   G   S + +YKKA + + KAI+++ N          
Sbjct: 520 QKALADFNKGIEIDSENSLLYGNRGRVYSELKDYKKAFDDYSKAIEINPNQSFYYTLRAR 579

Query: 550 ---------------------------FLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
                                       +EA+ +    YQ+L   +KAL+   +V+ +  
Sbjct: 580 VSQDLKDYNTVIKDYTKVIELKPEQEKIVEAYANRAGAYQNLKEFQKALDDANKVIELVP 639

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
                Y +RG +    G ++K + D +  + I P        R   Y  + +Y+ A+ DY
Sbjct: 640 DQFYGYVVRGGIYAESGDYQKTVDDYTKSIEIYPKWFVLYNRRGQAYFNLKQYQNALADY 699

Query: 643 DAALDLE 649
             ++++E
Sbjct: 700 TKSVEIE 706



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 117/271 (43%), Gaps = 38/271 (14%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG   ++  +Y  A++ F++ ++ D         RG   +  ++ + A  D+++AI+ N
Sbjct: 508 NRGNLYLDLKEYQKALADFNKGIEIDSENSLLYGNRGRVYSELKDYKKAFDDYSKAIEIN 567

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH---ERGIVNFKFKDFNAA 502
           P+    +  R +    L +    I+D +K +E +P    I+     R       K+F  A
Sbjct: 568 PNQSFYYTLRARVSQDLKDYNTVIKDYTKVIELKPEQEKIVEAYANRAGAYQNLKEFQKA 627

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           ++D +  ++L  +    Y   G   +  G+Y+K  + + K+I++       W  L     
Sbjct: 628 LDDANKVIELVPDQFYGYVVRGGIYAESGDYQKTVDDYTKSIEI----YPKWFVL----- 678

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                                    Y+ RG     L Q++ A+ D +  + I+P NI+  
Sbjct: 679 -------------------------YNRRGQAYFNLKQYQNALADYTKSVEIEP-NIDGY 712

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSM 653
           + RA  YH  G Y  A++DY   L+L+ +++
Sbjct: 713 FGRAIIYHKQGNYEAAVQDYKQILNLDQNNL 743



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 4/182 (2%)

Query: 413 MYPEALIG---RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
           + P+   G   RG   A   + +  + D+T++I+  P     + RRGQA   L +   A+
Sbjct: 637 LVPDQFYGYVVRGGIYAESGDYQKTVDDYTKSIEIYPKWFVLYNRRGQAYFNLKQYQNAL 696

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
            D +K++E EPN  D    R I+  K  ++ AAV+D    + LD+ N + +  LGL L  
Sbjct: 697 ADYTKSVEIEPN-IDGYFGRAIIYHKQGNYEAAVQDYKQILNLDQNNLATWNNLGLILYE 755

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
            G+   A +     ++      E    L     +    EK L   +  L +D+R+S   +
Sbjct: 756 TGDIANAIKPWTVIVESKAPIAETQLALAVALYNQGEQEKGLALAENALTLDRRYSDVKY 815

Query: 590 LR 591
           L+
Sbjct: 816 LQ 817


>gi|193215483|ref|YP_001996682.1| tetratricopeptide domain-containing protein [Chloroherpeton
           thalassium ATCC 35110]
 gi|193088960|gb|ACF14235.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 320

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 124/275 (45%), Gaps = 14/275 (5%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            SR  A    G Y++AI+ + Q ++ +  + +A + RG A+      + A++DF+E +  
Sbjct: 35  FSRASAHFMLGDYSAAIADYSQTIQLNEAHIDAYLARGGAKLALGNYQGALADFSEVVSR 94

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE-----RGIVNFKFKDF 499
           +    E +  RG     LG   EA+ DL + +  +P +   L E     R ++ +   ++
Sbjct: 95  DAKNPEGYNCRGTTNYLLGNYSEALDDLVQGIRLDPQTG--LTELAYSSRSMIEYDHGNY 152

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
            AA+ DL   +KLD +N  AY   G A      Y  A +   KAIQL  N      +L  
Sbjct: 153 AAAIADLGEVIKLDPQNPDAYYSRGSANYLAKNYDVAVKDFSKAIQL--NLPNEKAYLAH 210

Query: 560 FYQDLAN-----SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            +   A       + A+E   Q + +    + AY  RG+    LG +   ++D+ + L +
Sbjct: 211 LFSGTAQIGRGYYQSAVEHFSQAIELQNDCATAYTNRGIAQIELGNYDDGLQDVIAALRL 270

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           DP N +  +     Y  + + ++A++    A  LE
Sbjct: 271 DPQNADAYFYAGKAYSLLKQEKKAVEQIKQAARLE 305



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 6/248 (2%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  L+RG A++  G Y  A++ F +++  D   PE    RGT          A+ D  +
Sbjct: 65  IDAYLARGGAKLALGNYQGALADFSEVVSRDAKNPEGYNCRGTTNYLLGNYSEALDDLVQ 124

Query: 441 AIQSNPSAG---EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
            I+ +P  G    A+  R       G    AI DL + ++ +P + D  + RG  N+  K
Sbjct: 125 GIRLDPQTGLTELAYSSRSMIEYDHGNYAAAIADLGEVIKLDPQNPDAYYSRGSANYLAK 184

Query: 498 DFNAAVEDLSACVKLDKENKSAY---TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           +++ AV+D S  ++L+  N+ AY    + G A    G Y+ A E   +AI+L  +   A+
Sbjct: 185 NYDVAVKDFSKAIQLNLPNEKAYLAHLFSGTAQIGRGYYQSAVEHFSQAIELQNDCATAY 244

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            +      +L N +  L+ +   L +D + + AY   G     L Q KKA++ +     +
Sbjct: 245 TNRGIAQIELGNYDDGLQDVIAALRLDPQNADAYFYAGKAYSLLKQEKKAVEQIKQAARL 304

Query: 615 DPSNIECL 622
           +    + L
Sbjct: 305 EHKQAQAL 312



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 3/193 (1%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           +I+  +KA+E  P        R   +F   D++AA+ D S  ++L++ +  AY   G A 
Sbjct: 16  SIEFATKAIELAPTCEPAFFSRASAHFMLGDYSAAIADYSQTIQLNEAHIDAYLARGGAK 75

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK- 586
            ++G Y+ A     + +  D    E +         L N  +AL+ L Q + +D +    
Sbjct: 76  LALGNYQGALADFSEVVSRDAKNPEGYNCRGTTNYLLGNYSEALDDLVQGIRLDPQTGLT 135

Query: 587 --AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
             AY  R ++ +  G +  AI DL   + +DP N +  Y R S  +    Y  A+KD+  
Sbjct: 136 ELAYSSRSMIEYDHGNYAAAIADLGEVIKLDPQNPDAYYSRGSANYLAKNYDVAVKDFSK 195

Query: 645 ALDLELDSMEKFV 657
           A+ L L + + ++
Sbjct: 196 AIQLNLPNEKAYL 208


>gi|428311655|ref|YP_007122632.1| hypothetical protein Mic7113_3500 [Microcoleus sp. PCC 7113]
 gi|428253267|gb|AFZ19226.1| TPR repeat-containing protein [Microcoleus sp. PCC 7113]
          Length = 847

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 109/252 (43%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+   A++ F + +K DP  P A   RG A       E A++ F + ++ NP+    W+ 
Sbjct: 464 GRIEEALASFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPNESITWRN 523

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG     LG   +A+    KA+E EP +A+ L  RG        +  A+      ++LD 
Sbjct: 524 RGATLGNLGRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALVSYDKAIELDP 583

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            N +A    G+  S +  Y +A     KAI+LD N+   W +       L   ++AL   
Sbjct: 584 TNANALINQGVVFSKLRRYNEALVCADKAIELDPNYGLVWNYQGWVLGQLERYDEALTSY 643

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + + +D   +  +  RG LL  LG + + ++     + +   +      RA    A+  
Sbjct: 644 DKAIELDPTDADGWFNRGWLLGELGSYDEGLESCDKAIELGEQSSFVFLNRAEYLLALNR 703

Query: 635 YREAIKDYDAAL 646
           + + I   D AL
Sbjct: 704 WEDGIAALDKAL 715



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 5/244 (2%)

Query: 374 SKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           S SK+I +D        +RGIA     +Y  A++ F++ L+ +P        RG      
Sbjct: 472 SFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPNESITWRNRGATLGNL 531

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
              E A+  + +AI+  P+   A   RG A   LG   EA+    KA+E +P +A+ L  
Sbjct: 532 GRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALVSYDKAIELDPTNANALIN 591

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +G+V  K + +N A+      ++LD      + Y G  L  +  Y +A  ++ KAI+LD 
Sbjct: 592 QGVVFSKLRRYNEALVCADKAIELDPNYGLVWNYQGWVLGQLERYDEALTSYDKAIELDP 651

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
              + W +      +L + ++ LE   + + + ++ S  +  R   L  L + +  I  L
Sbjct: 652 TDADGWFNRGWLLGELGSYDEGLESCDKAIELGEQSSFVFLNRAEYLLALNRWEDGIAAL 711

Query: 609 SSGL 612
              L
Sbjct: 712 DKAL 715



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 35/260 (13%)

Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
           A + E  +A A+ I  +++     + E  + +G        +E A++ F++AI+ +P+  
Sbjct: 426 AYLEEENFAQALQIAQELVAIRG-HIEDWLEQGYCLGVLGRIEEALASFSKAIKLDPNEP 484

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
            AW  RG A   L    EA+   +K LE  PN +     RG           A+      
Sbjct: 485 IAWFNRGIALRCLERYEEALASFNKGLELNPNESITWRNRGATLGNLGRHEDALISYDKA 544

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           ++L+  N +A    G AL ++G Y++A  ++ KAI+LD     A  +    +  L    +
Sbjct: 545 IELEPANANALINRGAALGNLGRYEEALVSYDKAIELDPTNANALINQGVVFSKLRRYNE 604

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           AL C  + + +D  +   ++ +G +L   GQ ++                          
Sbjct: 605 ALVCADKAIELDPNYGLVWNYQGWVL---GQLER-------------------------- 635

Query: 630 HAIGEYREAIKDYDAALDLE 649
                Y EA+  YD A++L+
Sbjct: 636 -----YDEALTSYDKAIELD 650



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G  L  +G  ++A  +  KAI+LD N   AW +     + L   E+AL    + L ++  
Sbjct: 457 GYCLGVLGRIEEALASFSKAIKLDPNEPIAWFNRGIALRCLERYEEALASFNKGLELNPN 516

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            S  +  RG  L  LG+H+ A+      + ++P+N   L  R +    +G Y EA+  YD
Sbjct: 517 ESITWRNRGATLGNLGRHEDALISYDKAIELEPANANALINRGAALGNLGRYEEALVSYD 576

Query: 644 AALDLELDSMEKFVLQCLAF 663
            A++L+  +    + Q + F
Sbjct: 577 KAIELDPTNANALINQGVVF 596



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 43/81 (53%)

Query: 51  NWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKG 110
           N+++A++I   L+A    I+D   + +C   L   +  +    KA++LDP    A+  +G
Sbjct: 432 NFAQALQIAQELVAIRGHIEDWLEQGYCLGVLGRIEEALASFSKAIKLDPNEPIAWFNRG 491

Query: 111 CAFSALGRKEEALSVWEKGYE 131
            A   L R EEAL+ + KG E
Sbjct: 492 IALRCLERYEEALASFNKGLE 512


>gi|434388181|ref|YP_007098792.1| trypsin-like serine protease with C-terminal PDZ domain
           [Chamaesiphon minutus PCC 6605]
 gi|428019171|gb|AFY95265.1| trypsin-like serine protease with C-terminal PDZ domain
           [Chamaesiphon minutus PCC 6605]
          Length = 516

 Score = 90.5 bits (223), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 122/278 (43%), Gaps = 35/278 (12%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +VDF L  G+ + N G    +I   ++ +K +P Y +A I R TA    + + AAISD  
Sbjct: 266 AVDFFLI-GVDRFNRGNLGGSIEAMNEAIKLNPRYTKAYIARATANFMSKRIGAAISDVD 324

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            AIQS P++G A+  +    +  G+  EA+   ++A+   P SA + + +G+V  + +++
Sbjct: 325 LAIQSEPTSGLAYAGKCFFLSEFGKHGEALGACNRAVSLAPKSAMVYNVKGLVGLRLRNY 384

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           + A  DL   ++LD   K  Y Y  LA+      + A+   L AI L R          +
Sbjct: 385 SVAAADLERSIELDP--KLYYAYNNLAI-----VRNAQRNTLAAINLAR----------R 427

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             Q    S      L Q+L  +K                  +++ + +L+  LG +P   
Sbjct: 428 AVQIAPKSPATRALLGQLLVANK-----------------DYRQGLMELNMALGWNPRMT 470

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           E    RA    AIG    A  D   A    L S E F+
Sbjct: 471 EAYKARAVANRAIGNTAAAQLDDRLARQYALTSTEGFI 508


>gi|334120282|ref|ZP_08494363.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
 gi|333456629|gb|EGK85259.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
           vaginatus FGP-2]
          Length = 406

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 119/247 (48%), Gaps = 1/247 (0%)

Query: 403 IFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
           + +++    P+  E     G  +A + + E A+ +F  AI+ NP   +A+  R   R  L
Sbjct: 136 LLERVRSNSPLCAEDFNKLGIKKAEEGDFEGALENFDRAIKLNPDYADAYNNRASVRHEL 195

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G+   AI+D +KA+   P+ A   +  GI+++   D+  A  D +   +L+  +  AY  
Sbjct: 196 GDDAGAIEDYTKAILLNPDRAVYHNNLGIISYNSDDYRGAQADHTRATQLNAGDAQAYNN 255

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ-FYQDLANSEKALECLQQVLYID 581
            G A   +G+ + A +   +AI+L+ +   AW +    ++  L +  KAL+   Q   ++
Sbjct: 256 RGFARLRLGDLQGALKDFTQAIELNAHDALAWNNRGDVYFLKLGDMPKALDDYTQAARLN 315

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
               K ++  G++   LG  +KA++D +  + +     E    R   ++ +G+ ++A  D
Sbjct: 316 PNNPKTFYYLGVIHSRLGNKEKALEDFTKAIELKRDFAEAYQNRGIVHYELGDSQKANVD 375

Query: 642 YDAALDL 648
           +  A +L
Sbjct: 376 FHNAKNL 382



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 35/218 (16%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP- 446
           GI +  EG +  A+  FD+ +K +P Y +A   R + R    +   AI D+T+AI  NP 
Sbjct: 155 GIKKAEEGDFEGALENFDRAIKLNPDYADAYNNRASVRHELGDDAGAIEDYTKAILLNPD 214

Query: 447 -------------------------------SAG--EAWKRRGQARAALGESVEAIQDLS 473
                                          +AG  +A+  RG AR  LG+   A++D +
Sbjct: 215 RAVYHNNLGIISYNSDDYRGAQADHTRATQLNAGDAQAYNNRGFARLRLGDLQGALKDFT 274

Query: 474 KALEFEPNSADILHERGIVNF-KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           +A+E   + A   + RG V F K  D   A++D +   +L+  N   + YLG+  S +G 
Sbjct: 275 QAIELNAHDALAWNNRGDVYFLKLGDMPKALDDYTQAARLNPNNPKTFYYLGVIHSRLGN 334

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
            +KA E   KAI+L R+F EA+ +    + +L +S+KA
Sbjct: 335 KEKALEDFTKAIELKRDFAEAYQNRGIVHYELGDSQKA 372


>gi|160889626|ref|ZP_02070629.1| hypothetical protein BACUNI_02052 [Bacteroides uniformis ATCC 8492]
 gi|317479179|ref|ZP_07938316.1| tetratricopeptide [Bacteroides sp. 4_1_36]
 gi|156860618|gb|EDO54049.1| tetratricopeptide repeat protein [Bacteroides uniformis ATCC 8492]
 gi|316904667|gb|EFV26484.1| tetratricopeptide [Bacteroides sp. 4_1_36]
          Length = 686

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 114/257 (44%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    RG A+    + + A SD   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +  EAI+D   A++++P +  + H   + + + +D+ AA EDL   + +    
Sbjct: 98  LARIRQNKFDEAIEDYKTAIKYDPENVVLWHNLSLCHIQKEDYEAAKEDLGTLLTIAPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +  +A     KAI +DR   + WG            ++A   L Q
Sbjct: 158 TRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQ 217

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            +++  + +  Y  R L        + A+ D    L IDP+N    Y R      +G+  
Sbjct: 218 SIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDN 277

Query: 637 EAIKDYDAALDLELDSM 653
            AI+D+D  L +E D+M
Sbjct: 278 RAIEDFDFVLKMEPDNM 294



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ +GKY  A +  DQ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    L+ EP++      RG++  +  D+  A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            S  +       + Y     A   IG++K AE+   K +++
Sbjct: 317 YSKVIAEYPNFMAGYYQRAEARKKIGDHKGAEQDEFKIMKM 357



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 9/236 (3%)

Query: 458 ARAAL--GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           AR AL   + V +IQ  ++ +  +P   +    RG+      D+  A  D  A ++ +  
Sbjct: 29  ARNALYFEDYVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDYQGAESDCDAAIQRNPF 88

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   GLA     ++ +A E +  AI+ D   +  W +L+  +    + E A E L 
Sbjct: 89  VVGAYQIRGLARIRQNKFDEAIEDYKTAIKYDPENVVLWHNLSLCHIQKEDYEAAKEDLG 148

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            +L I  R+++AY +RG +        +A++D    + +D  + +    RA      G+Y
Sbjct: 149 TLLTIAPRYTRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKY 208

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +EA  D D ++ L   +   ++ + LA + +       + +      +D+  DIDP
Sbjct: 209 KEAEADLDQSIHLSAKNAGNYINRALARFHQ-------NNLRGAMSDYDLALDIDP 257



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 74/170 (43%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +     A+  FD+ +  D   P+    R   R  Q + + A +D  ++I  
Sbjct: 162 LMRGEVSLKQNDTIQALRDFDKAIDMDRYDPDGWGARAIVRLQQGKYKEAEADLDQSIHL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A   + K I    NF+  +
Sbjct: 282 DFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGY 331



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 97/263 (36%), Gaps = 34/263 (12%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           +  + +  Y +A      +L   P Y  A + RG     Q +   A+ DF +AI  +   
Sbjct: 132 LCHIQKEDYEAAKEDLGTLLTIAPRYTRAYLMRGEVSLKQNDTIQALRDFDKAIDMDRYD 191

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            + W  R   R   G+  EA  DL +++     +A     R +  F   +   A+ D   
Sbjct: 192 PDGWGARAIVRLQQGKYKEAEADLDQSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDL 251

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + +D  N   +   GL  + +G+                                    
Sbjct: 252 ALDIDPNNFLGHYNRGLLRAQVGD----------------------------------DN 277

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+E    VL ++     A   RGLL    G ++ AI D S  +   P+ +   Y RA  
Sbjct: 278 RAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEA 337

Query: 629 YHAIGEYREAIKDYDAALDLELD 651
              IG+++ A +D    + +++D
Sbjct: 338 RKKIGDHKGAEQDEFKIMKMQID 360



 Score = 48.1 bits (113), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD +LK +P    A   RG  RA   +   AISD+++ I   
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEY 324

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           P+    + +R +AR  +G+   A QD  K ++ +
Sbjct: 325 PNFMAGYYQRAEARKKIGDHKGAEQDEFKIMKMQ 358



 Score = 45.1 bits (105), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 40/80 (50%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D ++   P +      RG   +  ++  AA++D+ +AI+ +P   EA+  RG     LG
Sbjct: 595 LDHVILLAPDFVYGYYNRGNVSSLLKDYRAALADYDKAIELSPDFAEAYFNRGLTHIFLG 654

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            + + I DLSKA E    SA
Sbjct: 655 NNKQGIADLSKAGELGIVSA 674



 Score = 45.1 bits (105), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   ++ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AI D SK +   PN     ++R     K  D   A +
Sbjct: 290 EPDNMMATFNRGLLRAQTGDYRGAISDYSKVIAEYPNFMAGYYQRAEARKKIGDHKGAEQ 349

Query: 505 DLSACVKL--DKEN 516
           D    +K+  DK N
Sbjct: 350 DEFKIMKMQIDKRN 363


>gi|428299394|ref|YP_007137700.1| hypothetical protein Cal6303_2758 [Calothrix sp. PCC 6303]
 gi|428235938|gb|AFZ01728.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 1787

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 122/252 (48%), Gaps = 1/252 (0%)

Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
           Y    I RG      ++ E A  D  +AI+  P+    +  RG +     E+ +A  D  
Sbjct: 677 YAIGYILRGAIYWKLKDYEKAFDDIKKAIELKPNNPNYYFIRGSSYLERKENQKAFADFK 736

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           KA+  +P++A++   R I   + KD   A+ D    ++L+ +N   Y     A   + + 
Sbjct: 737 KAITLQPSNAELYINRAIAYQEVKDTERAMADYKKAIELEPKNPERYITRAEAYQELKDT 796

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           ++A   + KAI+LD N  E +    + YQDL  +EKA+   ++ + I+      Y  RG 
Sbjct: 797 ERAMADYKKAIELDPNNPERYITRARAYQDLEENEKAMADYKKAIQIEPHDPWNYIWRGY 856

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
              G+ +++ A+ D +  + IDP N +    R S Y    E ++AI D   A++L+ D+ 
Sbjct: 857 AYQGMFRYQDALDDFNKAIEIDPKNPDLYNTRCSAYQEDDE-QKAISDCTKAIELDSDNP 915

Query: 654 EKFVLQCLAFYQ 665
           ++++ +   +++
Sbjct: 916 KRYLNRAEVYFK 927



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 10/276 (3%)

Query: 380  SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
            + +  ++R IA         A++ + + ++ +P  PE  I R  A    ++ E A++D+ 
Sbjct: 745  NAELYINRAIAYQEVKDTERAMADYKKAIELEPKNPERYITRAEAYQELKDTERAMADYK 804

Query: 440  EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN---FKF 496
            +AI+ +P+  E +  R +A   L E+ +A+ D  KA++ EP+       RG      F++
Sbjct: 805  KAIELDPNNPERYITRARAYQDLEENEKAMADYKKAIQIEPHDPWNYIWRGYAYQGMFRY 864

Query: 497  KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
            +D   A++D +  +++D +N   Y     A     E +KA     KAI+LD +  + + +
Sbjct: 865  QD---ALDDFNKAIEIDPKNPDLYNTRCSAYQEDDE-QKAISDCTKAIELDSDNPKRYLN 920

Query: 557  LTQFYQDLANSE---KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
              + Y    N +   K    L + + +D +    Y +R  +      +  AI D +  + 
Sbjct: 921  RAEVYFKSKNYQLKSKGFADLNKAIEVDPKNPNLYMIRSRVYMNFFDYPNAINDATKAID 980

Query: 614  IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            I PS  +C + RA  Y  + EY +A+ DY+  +++E
Sbjct: 981  IIPSCFDCYFWRAFSYRQMKEYEKALVDYNKIIEIE 1016



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/309 (22%), Positives = 133/309 (43%), Gaps = 44/309 (14%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+ G   +  GK   +++  +Q +  +P   +A   RG+  +FQ + + A+++F +A + 
Sbjct: 536 LNYGNQLLRSGKIEDSLTPLNQAINLNPKLYQAYYLRGSILSFQGKSKEALAEFNKATEL 595

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALE------------------FEPNSADIL 486
            P+  +AW+ +      L +  EA++ + KA+E                  F P    IL
Sbjct: 596 KPNFTQAWRIKSSLLFNLKKYPEALKAIDKAIEIQSKSKSDPVGKIKSSFTFYPLRIAIL 655

Query: 487 HE--------------------------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            E                          RG + +K KD+  A +D+   ++L   N + Y
Sbjct: 656 IELERYQEALDESKKFIDTSSYAIGYILRGAIYWKLKDYEKAFDDIKKAIELKPNNPNYY 715

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              G +     E +KA     KAI L  +  E + +    YQ++ ++E+A+   ++ + +
Sbjct: 716 FIRGSSYLERKENQKAFADFKKAITLQPSNAELYINRAIAYQEVKDTERAMADYKKAIEL 775

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           + +  + Y  R      L   ++A+ D    + +DP+N E    RA  Y  + E  +A+ 
Sbjct: 776 EPKNPERYITRAEAYQELKDTERAMADYKKAIELDPNNPERYITRARAYQDLEENEKAMA 835

Query: 641 DYDAALDLE 649
           DY  A+ +E
Sbjct: 836 DYKKAIQIE 844



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/248 (22%), Positives = 121/248 (48%), Gaps = 18/248 (7%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           ++E +++   +AI  NP   +A+  RG   +  G+S EA+ + +KA E +PN       +
Sbjct: 547 KIEDSLTPLNQAINLNPKLYQAYYLRGSILSFQGKSKEALAEFNKATELKPNFTQAWRIK 606

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKEN--------KSAYTYLGLALSSIGEYKKAEEAHL 541
             + F  K +  A++ +   +++  ++        KS++T+  L ++ + E ++ +E   
Sbjct: 607 SSLLFNLKKYPEALKAIDKAIEIQSKSKSDPVGKIKSSFTFYPLRIAILIELERYQE--- 663

Query: 542 KAIQLDRNFLE----AWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
            A+   + F++    A G++ +   Y  L + EKA + +++ + +       Y +RG   
Sbjct: 664 -ALDESKKFIDTSSYAIGYILRGAIYWKLKDYEKAFDDIKKAIELKPNNPNYYFIRGSSY 722

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
               +++KA  D    + + PSN E    RA  Y  + +   A+ DY  A++LE  + E+
Sbjct: 723 LERKENQKAFADFKKAITLQPSNAELYINRAIAYQEVKDTERAMADYKKAIELEPKNPER 782

Query: 656 FVLQCLAF 663
           ++ +  A+
Sbjct: 783 YITRAEAY 790



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 103/228 (45%), Gaps = 4/228 (1%)

Query: 425  RAF----QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
            RAF     +E E A+ D+ + I+  P    ++  R +    L +  +A  D  K +E EP
Sbjct: 992  RAFSYRQMKEYEKALVDYNKIIEIEPIDPYSYNVRAEFFLELKDYKKAFADYQKMIELEP 1051

Query: 481  NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
            N+++   ER    +  KD+  A  D +  +++D +N   Y        ++ +Y+ A   +
Sbjct: 1052 NNSENYLERAEAYWTLKDYQNAFADYTKAIEVDSKNPERYLKRAEVYWTLKDYQNAFADY 1111

Query: 541  LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
             KAI++D    E +    + Y  L + + A     + + +D +  + +  R      L  
Sbjct: 1112 TKAIEVDSKNPERYLKRAEAYWTLKDYQNAFADYTKAIEVDPKNPELHLKRAEAYWTLKD 1171

Query: 601  HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            ++ A  D +  + +DP N E    RA  Y  + +Y + I DY  A+++
Sbjct: 1172 YQNAFADYTKAIEVDPKNPERYRKRAKAYLEVKDYNKVITDYTKAINI 1219



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 17/292 (5%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            S+G A +N+     AI +       DP  P   + R        +   AI+D T+AI   
Sbjct: 935  SKGFADLNK-----AIEV-------DPKNPNLYMIRSRVYMNFFDYPNAINDATKAIDII 982

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            PS  + +  R  +   + E  +A+ D +K +E EP      + R     + KD+  A  D
Sbjct: 983  PSCFDCYFWRAFSYRQMKEYEKALVDYNKIIEIEPIDPYSYNVRAEFFLELKDYKKAFAD 1042

Query: 506  LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                ++L+  N   Y     A  ++ +Y+ A   + KAI++D    E +    + Y  L 
Sbjct: 1043 YQKMIELEPNNSENYLERAEAYWTLKDYQNAFADYTKAIEVDSKNPERYLKRAEVYWTLK 1102

Query: 566  NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
            + + A     + + +D +  + Y  R      L  ++ A  D +  + +DP N E    R
Sbjct: 1103 DYQNAFADYTKAIEVDSKNPERYLKRAEAYWTLKDYQNAFADYTKAIEVDPKNPELHLKR 1162

Query: 626  ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT 672
            A  Y  + +Y+ A  DY  A++++  + E++  +  A+     Y K I  YT
Sbjct: 1163 AEAYWTLKDYQNAFADYTKAIEVDPKNPERYRKRAKAYLEVKDYNKVITDYT 1214



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 131/308 (42%), Gaps = 56/308 (18%)

Query: 397  YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
            Y +A + + + ++ D   PE  + R  A    ++ + A +D+T+AI+ +P   E   +R 
Sbjct: 1104 YQNAFADYTKAIEVDSKNPERYLKRAEAYWTLKDYQNAFADYTKAIEVDPKNPELHLKRA 1163

Query: 457  QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            +A   L +   A  D +KA+E +P + +   +R     + KD+N  + D +  + +  +N
Sbjct: 1164 EAYWTLKDYQNAFADYTKAIEVDPKNPERYRKRAKAYLEVKDYNKVITDYTKAINIISDN 1223

Query: 517  KSAYTYL----------------GLALSSIGEYKKAEEAHLKAIQLDRNF------LEAW 554
             + YT L                G   S + +Y+ A   ++KAI++  N        +AW
Sbjct: 1224 PTYYTDLKVLNNISDSPTYYIERGDVYSELKDYQNALADYIKAIEIYDNLPALPNSQQAW 1283

Query: 555  -GHLTQFYQ-------------DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
              H T+ Y+             +  + +KA+  L +++  +      Y  RG     L  
Sbjct: 1284 LMHSTKKYKYEETRLKIVKTSLNYKDYQKAIVNLTKIIQQNPNVFDLYFHRGSASLELKD 1343

Query: 601  HKKAIKDLSSGL-------GIDPSNIEC------------LYL-RASCYHAIGEYREAIK 640
            +K AI DL+  +        I    ++C            LY+ R   Y    +Y +AIK
Sbjct: 1344 NKNAIADLTKAIEIMEKEKNISSFAVKCTFSDLLCVKEWSLYVNRGLAYKNQQDYLKAIK 1403

Query: 641  DYDAALDL 648
            D++ A ++
Sbjct: 1404 DFNKAAEI 1411



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 75/339 (22%), Positives = 140/339 (41%), Gaps = 35/339 (10%)

Query: 361  EAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
            E KR +K+ +   SK+     +  L++  A    G Y + ++ + + ++  P   E  +G
Sbjct: 1421 EYKRVQKYLIELASKNP----EPYLTKVEASQRSGDYKNMLANYTKAIEIAPQESEFYMG 1476

Query: 421  RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE--- 477
            R       +    A  D+ +AI  +      +  R +A   + ++ +A  D +KA+E   
Sbjct: 1477 RANVYFLLKNYRKAFVDYNKAIAFDSEKSWYYIERAEAYLKVKDNEKAFVDYNKAIEIYT 1536

Query: 478  -----FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
                 F   S+    +R     K K++  A  D +  + L+ ++ + Y     A   I +
Sbjct: 1537 KNIAKFSSISSFYYIDRAKAYLKVKNYEKAFADYNKAIALEPDDDNNYIARAKAYLEIKD 1596

Query: 533  YKKAEEAHLKAIQLDRNF-----------LEAWGHLT--QFYQDLANSEKALECLQQVLY 579
            Y+KA   + KAI  D              LE + +L   + Y ++ N EKA     +   
Sbjct: 1597 YEKAFADYNKAIADDNKAIAIQPEPYAIQLELYNYLARAEAYLEIKNYEKAFADYNKANL 1656

Query: 580  IDKRFS-----KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
                F       AY  +     G+  ++ AI + +  + + P+N      R   Y     
Sbjct: 1657 EGNHFPYFIKITAYIKQAEAYLGIKDYQNAIDNHTKVINLQPNNPIFYNSRGLAYFRSQN 1716

Query: 635  YREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEI 668
            Y+++I DY+ AL+L+ D  + +  + LA+     YQK I
Sbjct: 1717 YQQSILDYNKALELQPDYADSYYNRGLAYKELKDYQKAI 1755



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 107/265 (40%), Gaps = 45/265 (16%)

Query: 385  LSRGIAQVNEGKYASAISIFD---QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
            ++RG+A  N+  Y  AI  F+   +ILK +             R+ Q E +       E 
Sbjct: 1386 VNRGLAYKNQQDYLKAIKDFNKAAEILKYN-------------RSNQEEYKRVQKYLIEL 1432

Query: 442  IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
               NP   E +  + +A    G+    + + +KA+E  P  ++    R  V F  K++  
Sbjct: 1433 ASKNP---EPYLTKVEASQRSGDYKNMLANYTKAIEIAPQESEFYMGRANVYFLLKNYRK 1489

Query: 502  AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            A  D +  +  D E    Y     A   + + +KA   + KAI++    +  +  ++ FY
Sbjct: 1490 AFVDYNKAIAFDSEKSWYYIERAEAYLKVKDNEKAFVDYNKAIEIYTKNIAKFSSISSFY 1549

Query: 562  QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
                             YID+  +KAY         +  ++KA  D +  + ++P +   
Sbjct: 1550 -----------------YIDR--AKAY-------LKVKNYEKAFADYNKAIALEPDDDNN 1583

Query: 622  LYLRASCYHAIGEYREAIKDYDAAL 646
               RA  Y  I +Y +A  DY+ A+
Sbjct: 1584 YIARAKAYLEIKDYEKAFADYNKAI 1608



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 7/143 (4%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYP-----EALIGRGTARAFQRELEAAISDFT 439
            L+R  A +    Y  A + +++   E   +P      A I +  A    ++ + AI + T
Sbjct: 1632 LARAEAYLEIKNYEKAFADYNKANLEGNHFPYFIKITAYIKQAEAYLGIKDYQNAIDNHT 1691

Query: 440  EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            + I   P+    +  RG A        ++I D +KALE +P+ AD  + RG+   + KD+
Sbjct: 1692 KVINLQPNNPIFYNSRGLAYFRSQNYQQSILDYNKALELQPDYADSYYNRGLAYKELKDY 1751

Query: 500  NAAVEDLSACVK--LDKENKSAY 520
              A+ D+   V+  L ++N+  Y
Sbjct: 1752 QKAITDIQKAVQIYLQQDNQEGY 1774



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 28/219 (12%)

Query: 419  IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA-------RAALGESVEAIQD 471
            I R  A    +  E A +D+ +AI   P     +  R +A         A  +  +AI D
Sbjct: 1551 IDRAKAYLKVKNYEKAFADYNKAIALEPDDDNNYIARAKAYLEIKDYEKAFADYNKAIAD 1610

Query: 472  LSKALEFEPNSADILHE------RGIVNFKFKDFNAAVEDLSAC----------VKLDKE 515
             +KA+  +P    I  E      R     + K++  A  D +            +K+   
Sbjct: 1611 DNKAIAIQPEPYAIQLELYNYLARAEAYLEIKNYEKAFADYNKANLEGNHFPYFIKITAY 1670

Query: 516  NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
             K A  YLG     I +Y+ A + H K I L  N    +      Y    N ++++    
Sbjct: 1671 IKQAEAYLG-----IKDYQNAIDNHTKVINLQPNNPIFYNSRGLAYFRSQNYQQSILDYN 1725

Query: 576  QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            + L +   ++ +Y+ RGL    L  ++KAI D+   + I
Sbjct: 1726 KALELQPDYADSYYNRGLAYKELKDYQKAITDIQKAVQI 1764



 Score = 40.8 bits (94), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 22/228 (9%)

Query: 373  ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
            I+K  SIS  + + R  A +    Y  A + +++ +  +P      I R  A    ++ E
Sbjct: 1539 IAKFSSISSFYYIDRAKAYLKVKNYEKAFADYNKAIALEPDDDNNYIARAKAYLEIKDYE 1598

Query: 433  AAISDFTEAI---------QSNPSAGEA----WKRRGQARAALGESVEAIQDLSKA-LE- 477
             A +D+ +AI         Q  P A +     +  R +A   +    +A  D +KA LE 
Sbjct: 1599 KAFADYNKAIADDNKAIAIQPEPYAIQLELYNYLARAEAYLEIKNYEKAFADYNKANLEG 1658

Query: 478  -----FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
                 F   +A I      +  K  D+  A+++ +  + L   N   Y   GLA      
Sbjct: 1659 NHFPYFIKITAYIKQAEAYLGIK--DYQNAIDNHTKVINLQPNNPIFYNSRGLAYFRSQN 1716

Query: 533  YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
            Y+++   + KA++L  ++ +++ +    Y++L + +KA+  +Q+ + I
Sbjct: 1717 YQQSILDYNKALELQPDYADSYYNRGLAYKELKDYQKAITDIQKAVQI 1764


>gi|158334750|ref|YP_001515922.1| TPR repeat-containing serine/threonine protein kinase
           [Acaryochloris marina MBIC11017]
 gi|158304991|gb|ABW26608.1| serine/threonine protein kinase with TPR repeats [Acaryochloris
           marina MBIC11017]
          Length = 654

 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 130/284 (45%), Gaps = 5/284 (1%)

Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
           N    V+ +S+S+++     L  G  +   G Y  AI+ +D+ +  D    +A   RG A
Sbjct: 347 NNTVSVSPMSRSEAL-----LRSGYEKYRAGDYQGAIADYDESIDLDDQNADAFNERGLA 401

Query: 425 RAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           +   +  +AA++D+ +A++ +     A+  RG  + AL +   A++D ++A+      A 
Sbjct: 402 QYGLQNYQAALADYDQALKLDDQHSNAFGNRGLTKHALQDYKGAVEDYNQAIRLNSQYAY 461

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
           + H RG+  +  KD   A+ D    +++D + +      G     +G+Y+ A     +AI
Sbjct: 462 VYHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDFDEAI 521

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           +LD    +A+         L + +  L    Q L +D +   AY+ RGL  +    +++A
Sbjct: 522 RLDGKNAKAYNGRAHAKGKLGDWKGELADFDQALELDDQLVDAYNSRGLAKYNRKNYREA 581

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           I+D ++ + ++P      + R        +   A  D+  A DL
Sbjct: 582 IQDYNTAIRLEPDYAVAYFNRGFVKEVQNDVEGAKADFQKAADL 625



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 118/234 (50%), Gaps = 7/234 (2%)

Query: 441 AIQSNP-------SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AIQ+N        S  EA  R G  +   G+   AI D  ++++ +  +AD  +ERG+  
Sbjct: 343 AIQANNTVSVSPMSRSEALLRSGYEKYRAGDYQGAIADYDESIDLDDQNADAFNERGLAQ 402

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           +  +++ AA+ D    +KLD ++ +A+   GL   ++ +YK A E + +AI+L+  +   
Sbjct: 403 YGLQNYQAALADYDQALKLDDQHSNAFGNRGLTKHALQDYKGAVEDYNQAIRLNSQYAYV 462

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           + +      +L + + AL    Q L ID +       RG + + LGQ++ A+ D    + 
Sbjct: 463 YHNRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDFDEAIR 522

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           +D  N +    RA     +G+++  + D+D AL+L+   ++ +  + LA Y ++
Sbjct: 523 LDGKNAKAYNGRAHAKGKLGDWKGELADFDQALELDDQLVDAYNSRGLAKYNRK 576



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 112/236 (47%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           EAL+  G  +    + + AI+D+ E+I  +    +A+  RG A+  L     A+ D  +A
Sbjct: 359 EALLRSGYEKYRAGDYQGAIADYDESIDLDDQNADAFNERGLAQYGLQNYQAALADYDQA 418

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L+ +   ++    RG+     +D+  AVED +  ++L+ +    Y   G++  ++ + + 
Sbjct: 419 LKLDDQHSNAFGNRGLTKHALQDYKGAVEDYNQAIRLNSQYAYVYHNRGVSKYNLKDLQG 478

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A   + +A+++D    +   +  + + DL     AL    + + +D + +KAY+ R    
Sbjct: 479 ALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDFDEAIRLDGKNAKAYNGRAHAK 538

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
             LG  K  + D    L +D   ++    R    +    YREAI+DY+ A+ LE D
Sbjct: 539 GKLGDWKGELADFDQALELDDQLVDAYNSRGLAKYNRKNYREAIQDYNTAIRLEPD 594



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 79/164 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+++ N      A+S +DQ L+ DP   + L  RG       +   A++DF EAI+ +
Sbjct: 465 NRGVSKYNLKDLQGALSDYDQALRIDPKREDTLRNRGRIHYDLGQYRTALTDFDEAIRLD 524

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               +A+  R  A+  LG+    + D  +ALE +    D  + RG+  +  K++  A++D
Sbjct: 525 GKNAKAYNGRAHAKGKLGDWKGELADFDQALELDDQLVDAYNSRGLAKYNRKNYREAIQD 584

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            +  ++L+ +   AY   G       + + A+    KA  L +N
Sbjct: 585 YNTAIRLEPDYAVAYFNRGFVKEVQNDVEGAKADFQKAADLYQN 628


>gi|300868980|ref|ZP_07113584.1| hypothetical protein OSCI_3880037 [Oscillatoria sp. PCC 6506]
 gi|300333047|emb|CBN58776.1| hypothetical protein OSCI_3880037 [Oscillatoria sp. PCC 6506]
          Length = 725

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 13/296 (4%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG  Q   G    AI+ +++ ++  P    A   RG A       E AI+ F +A
Sbjct: 7   DAWFNRGYLQYERGDLEGAIASYNKAIEFKPDDDVAWYNRGGALKKLGRNEEAIACFDQA 66

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+  P   +AW  RG     LG   EAI    +A++F+PN  +  + RG   FK + F  
Sbjct: 67  IKFQPGCHQAWNNRGLVLYELGRIEEAIASYKQAIKFKPNFHEAWNNRGFALFKLERFEE 126

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+      + + +++   +   G+AL+  G  + A  +  +A+ +  +F +AW +     
Sbjct: 127 AIACFDEALVIKRDDHKVWNNRGIALAHFGNLEAALASFDQALAIKSDFYQAWNNRGILL 186

Query: 562 QD-LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            D L   E+AL    Q +     +  A++ RG+ L  L   + AI      L I P    
Sbjct: 187 CDQLGQYEEALASFDQAIKFKPDYHDAWYNRGIALGHLEDFEGAINSFDKALAIKPDYYS 246

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKI 676
            L L  +        ++  +D+        DS  +F+ +     QK+I  Y   K 
Sbjct: 247 SLSLEKTA-----TVKQLQRDHT-------DSFRRFIAKTQKPIQKKILQYQLEKF 290



 Score = 47.4 bits (111), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 4/192 (2%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           AD    RG + ++  D   A+   +  ++   ++  A+   G AL  +G  ++A     +
Sbjct: 6   ADAWFNRGYLQYERGDLEGAIASYNKAIEFKPDDDVAWYNRGGALKKLGRNEEAIACFDQ 65

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           AI+      +AW +      +L   E+A+   +Q +     F +A++ RG  L  L + +
Sbjct: 66  AIKFQPGCHQAWNNRGLVLYELGRIEEAIASYKQAIKFKPNFHEAWNNRGFALFKLERFE 125

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF----VL 658
           +AI      L I   + +    R       G    A+  +D AL ++ D  + +    +L
Sbjct: 126 EAIACFDEALVIKRDDHKVWNNRGIALAHFGNLEAALASFDQALAIKSDFYQAWNNRGIL 185

Query: 659 QCLAFYQKEIAL 670
            C    Q E AL
Sbjct: 186 LCDQLGQYEEAL 197


>gi|333381476|ref|ZP_08473158.1| hypothetical protein HMPREF9455_01324 [Dysgonomonas gadei ATCC
           BAA-286]
 gi|332830446|gb|EGK03074.1| hypothetical protein HMPREF9455_01324 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 684

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 2/278 (0%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI  F+Q +K  P   E    R  A+ +  +      D T A++ NP   +A++ R 
Sbjct: 39  YVLAIQYFNQAIKAKPYLAEPYFYRAIAKYYLDDYRGTEDDCTLALERNPFMSKAYQLRA 98

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR        A++D   +LE  PN    L   GIVN + KD+  A + L+  +K     
Sbjct: 99  DARQNQNNYDGALEDYKVSLEVYPNDKFALINMGIVNIQKKDYEEAEKYLNTLLKSYPTY 158

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
              +   G      G+  +A E + +AI+LD+   +++      Y    + +KA+  L +
Sbjct: 159 TQGFLTRGALYQEKGDTLQAFENYNQAIKLDKYLPQSYSMRGLLYYYKKDYDKAMADLDE 218

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            + ID   S  Y  RGL+ +     + A+ D    + +DP+NI   + R      +G+  
Sbjct: 219 AIRIDPLQSGNYINRGLIRYSKNDLRGAMSDYDKVIDLDPNNIIARFNRGLLRSQVGDDN 278

Query: 637 EAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTAS 674
            AI D+D  L  E ++   +  + L   +  I  YT S
Sbjct: 279 RAIADFDIVLKYEPNNYIAYFNRSLI--KNNIGDYTGS 314



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 16/243 (6%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           LIGR +   +  +   AI  F +AI++ P   E +  R  A+  L +      D + ALE
Sbjct: 28  LIGRNSL--YFEDYVLAIQYFNQAIKAKPYLAEPYFYRAIAKYYLDDYRGTEDDCTLALE 85

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
             P  +     R        +++ A+ED    +++   +K A   +G+      +Y++AE
Sbjct: 86  RNPFMSKAYQLRADARQNQNNYDGALEDYKVSLEVYPNDKFALINMGIVNIQKKDYEEAE 145

Query: 538 EAHLKAIQLDRNFLEAWGHLTQ-------FYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           + +L  +      L+++   TQ        YQ+  ++ +A E   Q + +DK   ++Y +
Sbjct: 146 K-YLNTL------LKSYPTYTQGFLTRGALYQEKGDTLQAFENYNQAIKLDKYLPQSYSM 198

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RGLL +    + KA+ DL   + IDP        R    ++  + R A+ DYD  +DL+ 
Sbjct: 199 RGLLYYYKKDYDKAMADLDEAIRIDPLQSGNYINRGLIRYSKNDLRGAMSDYDKVIDLDP 258

Query: 651 DSM 653
           +++
Sbjct: 259 NNI 261



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 123/277 (44%), Gaps = 1/277 (0%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C   + ++  +S  ++L R  A+ N+  Y  A+  +   L+  P    ALI  G     +
Sbjct: 80  CTLALERNPFMSKAYQL-RADARQNQNNYDGALEDYKVSLEVYPNDKFALINMGIVNIQK 138

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++ E A       ++S P+  + +  RG      G++++A ++ ++A++ +         
Sbjct: 139 KDYEEAEKYLNTLLKSYPTYTQGFLTRGALYQEKGDTLQAFENYNQAIKLDKYLPQSYSM 198

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG++ +  KD++ A+ DL   +++D      Y   GL   S  + + A   + K I LD 
Sbjct: 199 RGLLYYYKKDYDKAMADLDEAIRIDPLQSGNYINRGLIRYSKNDLRGAMSDYDKVIDLDP 258

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N + A  +       + +  +A+     VL  +     AY  R L+ + +G +  +++DL
Sbjct: 259 NNIIARFNRGLLRSQVGDDNRAIADFDIVLKYEPNNYIAYFNRSLIKNNIGDYTGSLEDL 318

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           +  L   P      Y+R+       + + A +D++ A
Sbjct: 319 NVVLAEYPEFYHGFYMRSEIKRRQNDLKGAERDFNYA 355



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 25/199 (12%)

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           + E  ++I DLSK +  +P +AD+   R +     +DF  ++ED +  + LD +   AY 
Sbjct: 476 IQEHFKSIDDLSKRIADQPANADLYFARAMDYMLVQDFTNSIEDFNKAISLDPKFTLAYF 535

Query: 522 YLGLALS-------SIGEYKKAEE----AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
            L +  +       ++ EY+K  +    A L  I+ D N L A   +     D    E  
Sbjct: 536 NLAVVYTKQLNLRENVPEYEKKSDQTDLATLGGIKKD-NSLPAATTIV----DPGKMEYD 590

Query: 571 L--ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           L  +   +V+ ++  F  AY+ R  + +    ++ AI D +  L  DP   E  Y R   
Sbjct: 591 LIVKNYNKVIELNPEFIYAYYNRAGIRYKQNDYRAAILDYNEALRRDPEFAEGYYNR--- 647

Query: 629 YHAIGEYREAIKDYDAALD 647
               G  R  +KD D ALD
Sbjct: 648 ----GLSRFQVKDKDRALD 662



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 2/114 (1%)

Query: 366 KKFCVTRISKSKSISVDFRLSRGIAQVNEGK--YASAISIFDQILKEDPMYPEALIGRGT 423
           KK   T ++    I  D  L      V+ GK  Y   +  ++++++ +P +  A   R  
Sbjct: 556 KKSDQTDLATLGGIKKDNSLPAATTIVDPGKMEYDLIVKNYNKVIELNPEFIYAYYNRAG 615

Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
            R  Q +  AAI D+ EA++ +P   E +  RG +R  + +   A+ D+ KA E
Sbjct: 616 IRYKQNDYRAAILDYNEALRRDPEFAEGYYNRGLSRFQVKDKDRALDDMRKAGE 669


>gi|237816772|ref|ZP_04595764.1| TPR domain-containing protein [Brucella abortus str. 2308 A]
 gi|376270821|ref|YP_005113866.1| hypothetical protein BAA13334_II00651 [Brucella abortus A13334]
 gi|376277527|ref|YP_005153588.1| hypothetical protein BCA52141_II1638 [Brucella canis HSK A52141]
 gi|384213475|ref|YP_005602558.1| hypothetical protein BM590_B0937 [Brucella melitensis M5-90]
 gi|384410576|ref|YP_005599196.1| hypothetical protein BM28_B0938 [Brucella melitensis M28]
 gi|384447076|ref|YP_005661294.1| hypothetical protein [Brucella melitensis NI]
 gi|237787585|gb|EEP61801.1| TPR domain-containing protein [Brucella abortus str. 2308 A]
 gi|326411123|gb|ADZ68187.1| TPR repeat-containing protein [Brucella melitensis M28]
 gi|326554415|gb|ADZ89054.1| TPR repeat-containing protein [Brucella melitensis M5-90]
 gi|349745073|gb|AEQ10615.1| TPR repeat-containing protein [Brucella melitensis NI]
 gi|363401993|gb|AEW18962.1| TPR repeat-containing protein [Brucella abortus A13334]
 gi|363405901|gb|AEW16195.1| TPR repeat-containing protein [Brucella canis HSK A52141]
          Length = 315

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 86  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 145

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G        Y++A                  
Sbjct: 146 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------NVYRQA------------------ 181

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           GHL Q          AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 182 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 231

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 232 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 280



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 89/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 106 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 165

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+          H RG++         A+ED 
Sbjct: 166 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 225

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 226 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 285

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 286 KAKAANSYARAVQLDPKYKPA 306



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A++DF +AI   
Sbjct: 139 NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALR 198

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      D++ A +D
Sbjct: 199 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDD 258

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ +A+QLD  +  A
Sbjct: 259 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPA 306



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 86  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 145

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ D +  + L   +  AY
Sbjct: 146 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAY 205

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 206 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 265

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 266 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 301


>gi|261220776|ref|ZP_05935057.1| TPR repeat-containing protein [Brucella ceti B1/94]
 gi|261312977|ref|ZP_05952174.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
 gi|261318373|ref|ZP_05957570.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
 gi|261757156|ref|ZP_06000865.1| RNA-binding region RNP-1 [Brucella sp. F5/99]
 gi|265986173|ref|ZP_06098730.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
 gi|265995868|ref|ZP_06108425.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
 gi|340792731|ref|YP_004758195.1| TPR repeat domain-containing protein [Brucella pinnipedialis B2/94]
 gi|260919360|gb|EEX86013.1| TPR repeat-containing protein [Brucella ceti B1/94]
 gi|261297596|gb|EEY01093.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
 gi|261302003|gb|EEY05500.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
 gi|261737140|gb|EEY25136.1| RNA-binding region RNP-1 [Brucella sp. F5/99]
 gi|262550165|gb|EEZ06326.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
 gi|264658370|gb|EEZ28631.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
 gi|340561190|gb|AEK56427.1| TPR repeat domain-containing protein [Brucella pinnipedialis B2/94]
          Length = 295

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G        Y++A                  
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------NVYRQA------------------ 161

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           GHL Q          AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 211

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 260



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 89/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 86  RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+          H RG++         A+ED 
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 205

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 206 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 265

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 266 KAKAANSYARTVQLDPKYKPA 286



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ D +  + L   +  AY
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAY 185

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 186 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 245

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 246 DQNVAESWANQALVYEHNGDKAKAANSYARTVQLDP 281



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 78/168 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A++DF +AI   
Sbjct: 119 NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALR 178

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      D++ A +D
Sbjct: 179 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDD 238

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ + +QLD  +  A
Sbjct: 239 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARTVQLDPKYKPA 286


>gi|225629417|ref|ZP_03787450.1| TPR domain-containing protein [Brucella ceti str. Cudo]
 gi|225615913|gb|EEH12962.1| TPR domain-containing protein [Brucella ceti str. Cudo]
          Length = 315

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 86  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 145

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G        Y++A                  
Sbjct: 146 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------NVYRQA------------------ 181

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           GHL Q          AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 182 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 231

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 232 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 280



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 89/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 106 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 165

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+          H RG++         A+ED 
Sbjct: 166 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 225

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 226 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 285

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 286 KAKAANSYARTVQLDPKYKPA 306



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 86  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 145

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ D +  + L   +  AY
Sbjct: 146 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAY 205

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 206 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 265

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 266 DQNVAESWANQALVYEHNGDKAKAANSYARTVQLDP 301



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 78/168 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A++DF +AI   
Sbjct: 139 NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALR 198

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      D++ A +D
Sbjct: 199 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDD 258

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ + +QLD  +  A
Sbjct: 259 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARTVQLDPKYKPA 306


>gi|148284415|ref|YP_001248505.1| hypothetical protein OTBS_0721 [Orientia tsutsugamushi str.
           Boryong]
 gi|148284902|ref|YP_001248992.1| hypothetical protein OTBS_1666 [Orientia tsutsugamushi str.
           Boryong]
 gi|146739854|emb|CAM79787.1| tetratricopeptide repeat protein with 8 trp repeats [Orientia
           tsutsugamushi str. Boryong]
 gi|146740341|emb|CAM80761.1| tetratricopeptide repeat protein with 8 trp repeats [Orientia
           tsutsugamushi str. Boryong]
          Length = 324

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 6/291 (2%)

Query: 331 SSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIA 390
           +++ D +  ++ E  + L  K    K    EA  N    +    K+K    +   ++G +
Sbjct: 5   ATLLDYQLINANEPANSLHRKLYQEKSEQKEAIENYNLAI----KNKPDFAEAYNNKGAS 60

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
                K   AI++ +  +K  P + EA   +G + A   + E A+ +F  AI+      E
Sbjct: 61  YGKLEKDKEAITLCNLAIKYKPHFAEAYNNKGVSLAILGKYEDALENFDIAIKYRSDNPE 120

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+  +G A   LG   EAI++   A+ + PN ++  H +G+       F  A+E     +
Sbjct: 121 AYYNKGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKAIEHFDLAI 180

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           K D  + +AY   G  LS +  Y +A E+   AI+ + N  EA+      ++ L   +KA
Sbjct: 181 KYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFEKLGKHQKA 240

Query: 571 LECLQQVLYIDKR--FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           +E     + I  +  F++ Y  +G+ L  LGQ+ KA ++ +  +  +P+ I
Sbjct: 241 IENFDIAIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYNPNII 291



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 55/222 (24%), Positives = 115/222 (51%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           + E + AI ++  AI++ P   EA+  +G +   L +  EAI   + A++++P+ A+  +
Sbjct: 30  KSEQKEAIENYNLAIKNKPDFAEAYNNKGASYGKLEKDKEAITLCNLAIKYKPHFAEAYN 89

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G+       +  A+E+    +K   +N  AY   G+AL  +G  ++A E +  AI+  
Sbjct: 90  NKGVSLAILGKYEDALENFDIAIKYRSDNPEAYYNKGIALMYLGYIQEAIENYDTAIRYR 149

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            N+ EA+ +       L   +KA+E     +  D   + AY  +G +L  L ++ +AI+ 
Sbjct: 150 PNYSEAYHNKGLTLAFLGQFQKAIEHFDLAIKYDPNDATAYCNKGYVLSMLKRYSEAIES 209

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            +  +  +P+  E  Y R   +  +G++++AI+++D A+ ++
Sbjct: 210 CNLAIKYNPNCAEAYYRRGMIFEKLGKHQKAIENFDIAIAIK 251



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 58/249 (23%), Positives = 122/249 (48%), Gaps = 2/249 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  ++  +K  P + EA   +G +     + + AI+    AI+  P   EA+  +G + 
Sbjct: 36  AIENYNLAIKNKPDFAEAYNNKGASYGKLEKDKEAITLCNLAIKYKPHFAEAYNNKGVSL 95

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
           A LG+  +A+++   A+++  ++ +  + +GI          A+E+    ++       A
Sbjct: 96  AILGKYEDALENFDIAIKYRSDNPEAYYNKGIALMYLGYIQEAIENYDTAIRYRPNYSEA 155

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   GL L+ +G+++KA E    AI+ D N   A+ +       L    +A+E     + 
Sbjct: 156 YHNKGLTLAFLGQFQKAIEHFDLAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIK 215

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
            +   ++AY+ RG++   LG+H+KAI+  D++  +   P+  E    +     ++G+Y +
Sbjct: 216 YNPNCAEAYYRRGMIFEKLGKHQKAIENFDIAIAIKYKPNFAENYLEKGISLVSLGQYSK 275

Query: 638 AIKDYDAAL 646
           A ++++ A+
Sbjct: 276 AKENFNLAI 284



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 3/213 (1%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K +S + +   ++GIA +  G    AI  +D  ++  P Y EA   +G   AF  + + A
Sbjct: 113 KYRSDNPEAYYNKGIALMYLGYIQEAIENYDTAIRYRPNYSEAYHNKGLTLAFLGQFQKA 172

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I  F  AI+ +P+   A+  +G   + L    EAI+  + A+++ PN A+  + RG++  
Sbjct: 173 IEHFDLAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNCAEAYYRRGMIFE 232

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
           K      A+E+    + +  +   A  YL  G++L S+G+Y KA+E    AI+ + N + 
Sbjct: 233 KLGKHQKAIENFDIAIAIKYKPNFAENYLEKGISLVSLGQYSKAKENFNLAIKYNPNIIA 292

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
            +  + +   +L N     E  +Q L I K++S
Sbjct: 293 EYEAMFKKLTELENFTGVKE-YEQKLQILKKYS 324



 Score = 42.0 bits (97), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDI---CNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
           L  L  + KAI   D  LA  Y+  D    CN+ +  S L+ +   I  C+ A++ +P  
Sbjct: 163 LAFLGQFQKAIEHFD--LAIKYDPNDATAYCNKGYVLSMLKRYSEAIESCNLAIKYNPNC 220

Query: 103 LQAYILKGCAFSALGRKEEAL 123
            +AY  +G  F  LG+ ++A+
Sbjct: 221 AEAYYRRGMIFEKLGKHQKAI 241


>gi|294853920|ref|ZP_06794592.1| hypothetical protein BAZG_02903 [Brucella sp. NVSL 07-0026]
 gi|294819575|gb|EFG36575.1| hypothetical protein BAZG_02903 [Brucella sp. NVSL 07-0026]
          Length = 315

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 86  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 145

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G        Y++A                  
Sbjct: 146 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------NVYRQA------------------ 181

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           GHL Q          AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 182 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 231

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 232 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 280



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 90/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 106 RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 165

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+          H RG++         A+ED 
Sbjct: 166 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 225

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+  ++
Sbjct: 226 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNSD 285

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 286 KAKAANSYARAVQLDPKYKPA 306



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 78/168 (46%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A++DF +AI   
Sbjct: 139 NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALR 198

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      D++ A +D
Sbjct: 199 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDD 258

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L      +  KA  ++ +A+QLD  +  A
Sbjct: 259 FNTAITLDQNVAESWANQALVYEHNSDKAKAANSYARAVQLDPKYKPA 306


>gi|23500690|ref|NP_700130.1| TPR domain-containing protein [Brucella suis 1330]
 gi|62317211|ref|YP_223064.1| hypothetical protein BruAb2_0269 [Brucella abortus bv. 1 str.
           9-941]
 gi|83269193|ref|YP_418484.1| hypothetical protein BAB2_0271 [Brucella melitensis biovar Abortus
           2308]
 gi|161621016|ref|YP_001594902.1| hypothetical protein BCAN_B0985 [Brucella canis ATCC 23365]
 gi|163845077|ref|YP_001622732.1| hypothetical protein BSUIS_B0956 [Brucella suis ATCC 23445]
 gi|225686724|ref|YP_002734696.1| TPR repeat-containing protein [Brucella melitensis ATCC 23457]
 gi|256015725|ref|YP_003105734.1| TPR domain-containing protein [Brucella microti CCM 4915]
 gi|256262142|ref|ZP_05464674.1| RNA-binding region RNP-1 [Brucella melitensis bv. 2 str. 63/9]
 gi|260544449|ref|ZP_05820270.1| RNA-binding region RNP-1 protein [Brucella abortus NCTC 8038]
 gi|260565013|ref|ZP_05835498.1| RNA-binding region RNP-1 protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260567784|ref|ZP_05838253.1| RNA-binding region RNP-1 protein [Brucella suis bv. 4 str. 40]
 gi|260756289|ref|ZP_05868637.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
 gi|260759716|ref|ZP_05872064.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
 gi|260762956|ref|ZP_05875288.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882112|ref|ZP_05893726.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
 gi|261217555|ref|ZP_05931836.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
 gi|261320430|ref|ZP_05959627.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
 gi|261750658|ref|ZP_05994367.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
 gi|261753914|ref|ZP_05997623.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
 gi|265990258|ref|ZP_06102815.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265992636|ref|ZP_06105193.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|297249260|ref|ZP_06932961.1| hypothetical protein BAYG_02006 [Brucella abortus bv. 5 str. B3196]
 gi|376278911|ref|YP_005108944.1| TPR domain-containing protein [Brucella suis VBI22]
 gi|384223472|ref|YP_005614637.1| hypothetical protein BS1330_II0956 [Brucella suis 1330]
 gi|423168901|ref|ZP_17155603.1| hypothetical protein M17_02590 [Brucella abortus bv. 1 str. NI435a]
 gi|423171666|ref|ZP_17158340.1| hypothetical protein M19_02198 [Brucella abortus bv. 1 str. NI474]
 gi|423174604|ref|ZP_17161274.1| hypothetical protein M1A_02001 [Brucella abortus bv. 1 str. NI486]
 gi|423176481|ref|ZP_17163147.1| hypothetical protein M1E_00743 [Brucella abortus bv. 1 str. NI488]
 gi|423181095|ref|ZP_17167735.1| hypothetical protein M1G_02194 [Brucella abortus bv. 1 str. NI010]
 gi|423184228|ref|ZP_17170864.1| hypothetical protein M1I_02196 [Brucella abortus bv. 1 str. NI016]
 gi|423187377|ref|ZP_17173990.1| hypothetical protein M1K_02194 [Brucella abortus bv. 1 str. NI021]
 gi|423189799|ref|ZP_17176408.1| hypothetical protein M1M_01480 [Brucella abortus bv. 1 str. NI259]
 gi|23464339|gb|AAN34135.1| TPR domain protein [Brucella suis 1330]
 gi|62197404|gb|AAX75703.1| TPR domain protein [Brucella abortus bv. 1 str. 9-941]
 gi|82939467|emb|CAJ12437.1| RNA-binding region RNP-1 (RNA recognition motif):TPR repeat
           [Brucella melitensis biovar Abortus 2308]
 gi|161337827|gb|ABX64131.1| TPR repeat-containing protein [Brucella canis ATCC 23365]
 gi|163675800|gb|ABY39910.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|225642829|gb|ACO02742.1| TPR repeat-containing protein [Brucella melitensis ATCC 23457]
 gi|255998385|gb|ACU50072.1| TPR domain protein [Brucella microti CCM 4915]
 gi|260097720|gb|EEW81594.1| RNA-binding region RNP-1 protein [Brucella abortus NCTC 8038]
 gi|260152656|gb|EEW87749.1| RNA-binding region RNP-1 protein [Brucella melitensis bv. 1 str.
           16M]
 gi|260154449|gb|EEW89530.1| RNA-binding region RNP-1 protein [Brucella suis bv. 4 str. 40]
 gi|260670034|gb|EEX56974.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
 gi|260673377|gb|EEX60198.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676397|gb|EEX63218.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
 gi|260871640|gb|EEX78709.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
 gi|260922644|gb|EEX89212.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
 gi|261293120|gb|EEX96616.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
 gi|261740411|gb|EEY28337.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
 gi|261743667|gb|EEY31593.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
 gi|262763506|gb|EEZ09538.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263000927|gb|EEZ13617.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263091843|gb|EEZ16165.1| RNA-binding region RNP-1 [Brucella melitensis bv. 2 str. 63/9]
 gi|297173129|gb|EFH32493.1| hypothetical protein BAYG_02006 [Brucella abortus bv. 5 str. B3196]
 gi|343384920|gb|AEM20411.1| TPR domain-containing protein [Brucella suis 1330]
 gi|358260349|gb|AEU08082.1| TPR domain-containing protein [Brucella suis VBI22]
 gi|374536088|gb|EHR07608.1| hypothetical protein M19_02198 [Brucella abortus bv. 1 str. NI474]
 gi|374538107|gb|EHR09617.1| hypothetical protein M17_02590 [Brucella abortus bv. 1 str. NI435a]
 gi|374539173|gb|EHR10679.1| hypothetical protein M1A_02001 [Brucella abortus bv. 1 str. NI486]
 gi|374545685|gb|EHR17145.1| hypothetical protein M1G_02194 [Brucella abortus bv. 1 str. NI010]
 gi|374546528|gb|EHR17987.1| hypothetical protein M1I_02196 [Brucella abortus bv. 1 str. NI016]
 gi|374553496|gb|EHR24911.1| hypothetical protein M1E_00743 [Brucella abortus bv. 1 str. NI488]
 gi|374555181|gb|EHR26590.1| hypothetical protein M1K_02194 [Brucella abortus bv. 1 str. NI021]
 gi|374555839|gb|EHR27244.1| hypothetical protein M1M_01480 [Brucella abortus bv. 1 str. NI259]
          Length = 295

 Score = 90.1 bits (222), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G        Y++A                  
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------NVYRQA------------------ 161

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           GHL Q          AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 211

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 260



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 89/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 86  RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+          H RG++         A+ED 
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 205

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 206 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 265

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 266 KAKAANSYARAVQLDPKYKPA 286



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A++DF +AI   
Sbjct: 119 NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALR 178

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      D++ A +D
Sbjct: 179 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDD 238

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ +A+QLD  +  A
Sbjct: 239 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPA 286



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ D +  + L   +  AY
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAY 185

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 186 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 245

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 246 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 281


>gi|409196336|ref|ZP_11224999.1| tetratricopeptide repeat protein [Marinilabilia salmonicolor JCM
           21150]
          Length = 713

 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 116/276 (42%), Gaps = 34/276 (12%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           ++++  ++ GIA +    +  A  ++ +IL E P    A + RG AR    +   A+ DF
Sbjct: 125 LNMNLMINLGIAYIQTKDFEKATQVYSEILDESPNMVTAYLNRGLARFSANDTVGALQDF 184

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
           ++A++ NP   + +  R       GE  +A++D+  A+   P  A +   RGI+ ++   
Sbjct: 185 SQAVERNPYIPDGFVNRSMVYYHQGEFEKALKDVDAAVLLRPEEASLYMNRGIIRYQLDS 244

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
               + D +  V+LD  N   Y   G+  + IG+             LD       G + 
Sbjct: 245 LRGTMADFNKFVELDPRNAMGYNNRGILRAEIGD-------------LD-------GAIN 284

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            F + LA   + L  L              + RG+L    G  +KA+ D +      P  
Sbjct: 285 DFSRVLALRGEDLPTL--------------YYRGMLYQEKGDFRKALSDYNIVADAYPDF 330

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
               Y RA    A+G+   A  DY+ A+ LE+D  E
Sbjct: 331 SPVYYNRAEVRMALGQEEAARLDYNTAMKLEMDRRE 366



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 114/285 (40%), Gaps = 34/285 (11%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI  F+QI+K  P   E    R   +    +   A+ D   A++ NP   +A+  RG
Sbjct: 41  YILAIQYFNQIIKAKPYLSEPYYYRAVGKYHLEDFPGALEDCDRALEINPYMIDAYNLRG 100

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                L     +I D  + L+ +P + +++   GI   + KDF  A +  S  +      
Sbjct: 101 IVHQKLENPKASIDDYKQGLDVDPLNMNLMINLGIAYIQTKDFEKATQVYSEILDESPNM 160

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL-- 574
            +AY   GLA  S  +   A +   +A++ +    + + + +  Y      EKAL+ +  
Sbjct: 161 VTAYLNRGLARFSANDTVGALQDFSQAVERNPYIPDGFVNRSMVYYHQGEFEKALKDVDA 220

Query: 575 -------QQVLY-------------------------IDKRFSKAYHLRGLLLHGLGQHK 602
                  +  LY                         +D R +  Y+ RG+L   +G   
Sbjct: 221 AVLLRPEEASLYMNRGIIRYQLDSLRGTMADFNKFVELDPRNAMGYNNRGILRAEIGDLD 280

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            AI D S  L +   ++  LY R   Y   G++R+A+ DY+   D
Sbjct: 281 GAINDFSRVLALRGEDLPTLYYRGMLYQEKGDFRKALSDYNIVAD 325



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 34/232 (14%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI  F + I++ P   E +  R   +  L +   A++D  +ALE  P   D  + RGIV+
Sbjct: 44  AIQYFNQIIKAKPYLSEPYYYRAVGKYHLEDFPGALEDCDRALEINPYMIDAYNLRGIVH 103

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            K ++  A+++D    + +D  N +    LG+A     +++KA                 
Sbjct: 104 QKLENPKASIDDYKQGLDVDPLNMNLMINLGIAYIQTKDFEKA----------------- 146

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
               TQ Y ++ +    +               AY  RGL          A++D S  + 
Sbjct: 147 ----TQVYSEILDESPNMVT-------------AYLNRGLARFSANDTVGALQDFSQAVE 189

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            +P   +    R+  Y+  GE+ +A+KD DAA+ L  +    ++ + +  YQ
Sbjct: 190 RNPYIPDGFVNRSMVYYHQGEFEKALKDVDAAVLLRPEEASLYMNRGIIRYQ 241



 Score = 47.8 bits (112), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y   I   +++++  P +  A   R   ++  R+ EA++ D+++AI  NP   EA+  RG
Sbjct: 604 YNLIIDDLNKVIELAPEFEFAWFNRAFMKSLLRDFEASVEDYSKAIALNPDFAEAYFNRG 663

Query: 457 QARAALGESVEAIQDLSKALEF 478
             R  L E+ +   DLSKA E 
Sbjct: 664 LNRIYLEETTKGTMDLSKAGEL 685


>gi|268323937|emb|CBH37525.1| conserved hypothetical protein, tetratricopeptide repeat family
           [uncultured archaeon]
          Length = 529

 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 127/269 (47%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S +V+  L +G   +   KY  A+  +++ +  +P + +A  G+G A    +  E A+  
Sbjct: 8   SKTVEKWLEKGDDLIKRKKYEKALKAYEKAIVINPQHAKAWNGKGVALDDLKRNEDALEA 67

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +AI  NP   EAW  +G A   L     A+    KA+E  P+ A++ + +G   +  K
Sbjct: 68  YEKAIDINPDFAEAWNNKGSALDDLKRHENALNAFEKAIEINPDFAEVWNGKGNALYGLK 127

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
            +  A+      ++++ +   A+   G AL  +  Y+ A +A+ KA++++  F E W + 
Sbjct: 128 RYENALNAFEKAIEINPDFAEAWNGKGSALDDLERYEDALKAYDKALEINPLFPEVWNNK 187

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                 L   E+AL   +  + I+  ++ A++ +G+ L  L ++++A+      +   P 
Sbjct: 188 GYTLGQLKRYEEALNAFEGAIEINSEYAAAWNGKGIALCTLERYEEALTAYEKAIEKGPE 247

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAAL 646
           ++         Y  +G+ + A +  + AL
Sbjct: 248 DVRPYSNSGELYFNLGDLKSASEKMEGAL 276



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 119/233 (51%), Gaps = 4/233 (1%)

Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
           KRN+   +    K+  I+ DF  +   +G A  +  ++ +A++ F++ ++ +P + E   
Sbjct: 59  KRNED-ALEAYEKAIDINPDFAEAWNNKGSALDDLKRHENALNAFEKAIEINPDFAEVWN 117

Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           G+G A    +  E A++ F +AI+ NP   EAW  +G A   L    +A++   KALE  
Sbjct: 118 GKGNALYGLKRYENALNAFEKAIEINPDFAEAWNGKGSALDDLERYEDALKAYDKALEIN 177

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           P   ++ + +G    + K +  A+      ++++ E  +A+   G+AL ++  Y++A  A
Sbjct: 178 PLFPEVWNNKGYTLGQLKRYEEALNAFEGAIEINSEYAAAWNGKGIALCTLERYEEALTA 237

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           + KAI+     +  + +  + Y +L + + A E ++  L  DK F+ A  L+G
Sbjct: 238 YEKAIEKGPEDVRPYSNSGELYFNLGDLKSASEKMEGALTKDKTFASALMLKG 290



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 101/200 (50%), Gaps = 6/200 (3%)

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
           E+G    K K +  A++     + ++ ++  A+   G+AL  +   + A EA+ KAI ++
Sbjct: 16  EKGDDLIKRKKYEKALKAYEKAIVINPQHAKAWNGKGVALDDLKRNEDALEAYEKAIDIN 75

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +F EAW +      DL   E AL   ++ + I+  F++ ++ +G  L+GL +++ A+  
Sbjct: 76  PDFAEAWNNKGSALDDLKRHENALNAFEKAIEINPDFAEVWNGKGNALYGLKRYENALNA 135

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL-----ELDSMEKFVLQCLA 662
               + I+P   E    + S    +  Y +A+K YD AL++     E+ + + + L  L 
Sbjct: 136 FEKAIEINPDFAEAWNGKGSALDDLERYEDALKAYDKALEINPLFPEVWNNKGYTLGQLK 195

Query: 663 FYQKEI-ALYTASKINSEFC 681
            Y++ + A   A +INSE+ 
Sbjct: 196 RYEEALNAFEGAIEINSEYA 215


>gi|198275234|ref|ZP_03207765.1| hypothetical protein BACPLE_01393 [Bacteroides plebeius DSM 17135]
 gi|198271817|gb|EDY96087.1| tetratricopeptide repeat protein [Bacteroides plebeius DSM 17135]
          Length = 667

 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 4/263 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++N   Y  A +   Q L+ +P    A   RG +R  Q+  + AI D+ +A++ +P
Sbjct: 65  RGLAKMNLDDYQGAEADCSQALERNPFVVNAYQIRGISRIRQQNYQGAIQDYRKALKMDP 124

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                W      R    E  +A  DL   +   P   D    R  V+ K KD   A+ D 
Sbjct: 125 ENISLWHNLALCRMHEEEYAQARADLDTLIRISPRYTDAYLMRTEVSLKQKDTLQAMNDA 184

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDL 564
              +++D+ N   ++  G+     G+YK AE    +AI+L       + +  L +++Q+ 
Sbjct: 185 DKAIEMDRYNPDTWSSRGMLFLQRGKYKDAETDLTEAIRLSVRNAGVYINRALARYHQN- 243

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N   A+      L +D+     ++ RGLL   +G   +AI+D    L ++P N+   + 
Sbjct: 244 -NLRGAMSDYDLALDVDRNNFIGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNLMARFN 302

Query: 625 RASCYHAIGEYREAIKDYDAALD 647
           R       G+Y  AI+DY A L+
Sbjct: 303 RGLLRDRTGDYPGAIEDYSAVLE 325



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 2/258 (0%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    RG A+    + + A +D ++A++ NP    A++ RG
Sbjct: 41  YVLSIQYFNQVIGAKPYLAEPYFYRGLAKMNLDDYQGAEADCSQALERNPFVVNAYQIRG 100

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            +R        AIQD  KAL+ +P +  + H   +     +++  A  DL   +++    
Sbjct: 101 ISRIRQQNYQGAIQDYRKALKMDPENISLWHNLALCRMHEEEYAQARADLDTLIRISPRY 160

Query: 517 KSAYTY-LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
             AY     ++L      +   +A  KAI++DR   + W      +      + A   L 
Sbjct: 161 TDAYLMRTEVSLKQKDTLQAMNDAD-KAIEMDRYNPDTWSSRGMLFLQRGKYKDAETDLT 219

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + +  R +  Y  R L  +     + A+ D    L +D +N    Y R      +G+ 
Sbjct: 220 EAIRLSVRNAGVYINRALARYHQNNLRGAMSDYDLALDVDRNNFIGHYNRGLLRAQVGDD 279

Query: 636 REAIKDYDAALDLELDSM 653
             AI+D+D  L +E D++
Sbjct: 280 NRAIEDFDFVLKMEPDNL 297



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 73/160 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+  +  GKY  A +   + ++         I R  AR  Q  L  A+SD+  A+  +
Sbjct: 200 SRGMLFLQRGKYKDAETDLTEAIRLSVRNAGVYINRALARYHQNNLRGAMSDYDLALDVD 259

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +       RG  RA +G+   AI+D    L+ EP++      RG++  +  D+  A+ED
Sbjct: 260 RNNFIGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNLMARFNRGLLRDRTGDYPGAIED 319

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            SA ++      + Y Y   A   +G+ K A+    K ++
Sbjct: 320 YSAVLEEYPNFLAGYQYRAQARRKVGDLKGADADEFKVLK 359



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/254 (20%), Positives = 105/254 (41%), Gaps = 34/254 (13%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            + +++E +YA A +  D +++  P Y +A + R      Q++   A++D  +AI+ +  
Sbjct: 134 ALCRMHEEEYAQARADLDTLIRISPRYTDAYLMRTEVSLKQKDTLQAMNDADKAIEMDRY 193

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             + W  RG      G+  +A  DL++A+     +A +   R +  +   +   A+ D  
Sbjct: 194 NPDTWSSRGMLFLQRGKYKDAETDLTEAIRLSVRNAGVYINRALARYHQNNLRGAMSDYD 253

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + +D+ N   +   GL  + +G+  +A E     ++++ + L A              
Sbjct: 254 LALDVDRNNFIGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNLMA-------------- 299

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
                          RF+     RGLL    G +  AI+D S+ L   P+ +     RA 
Sbjct: 300 ---------------RFN-----RGLLRDRTGDYPGAIEDYSAVLEEYPNFLAGYQYRAQ 339

Query: 628 CYHAIGEYREAIKD 641
               +G+ + A  D
Sbjct: 340 ARRKVGDLKGADAD 353



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)

Query: 363 KRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG 422
           KR++KF V  + +               QV    Y       D++++  P +  A   RG
Sbjct: 546 KRDRKFEVETVEEQN------------LQVRSYDYNKVREDLDRVIELAPDFVYAYYNRG 593

Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
              A  ++  AA+ D+ +AI+ +P   +A+  RG     LG + + IQDLSKA E    S
Sbjct: 594 NILAVMKDYRAALVDYNKAIELDPRFADAYYNRGLTNIFLGNNRQGIQDLSKAGELGIFS 653

Query: 483 A 483
           A
Sbjct: 654 A 654



 Score = 44.7 bits (104), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 78/190 (41%), Gaps = 28/190 (14%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           +I + + A+  EP +    + R +  +  +DF+ A++DL   ++ D     AY    L  
Sbjct: 479 SIDERTAAIVKEPGNVLHYYARALDFYLVQDFDNALKDLDEAIRCDSTFFPAYFSRALIY 538

Query: 528 SSIGEYKK---------AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
               EY+K          EE +L+    D N                   K  E L +V+
Sbjct: 539 YKQLEYRKRDRKFEVETVEEQNLQVRSYDYN-------------------KVREDLDRVI 579

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            +   F  AY+ RG +L  +  ++ A+ D +  + +DP   +  Y R      +G  R+ 
Sbjct: 580 ELAPDFVYAYYNRGNILAVMKDYRAALVDYNKAIELDPRFADAYYNRGLTNIFLGNNRQG 639

Query: 639 IKDYDAALDL 648
           I+D   A +L
Sbjct: 640 IQDLSKAGEL 649



 Score = 41.6 bits (96), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 36/76 (47%)

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           D    I+  P    A+  RG   A + +   A+ D +KA+E +P  AD  + RG+ N   
Sbjct: 574 DLDRVIELAPDFVYAYYNRGNILAVMKDYRAALVDYNKAIELDPRFADAYYNRGLTNIFL 633

Query: 497 KDFNAAVEDLSACVKL 512
            +    ++DLS   +L
Sbjct: 634 GNNRQGIQDLSKAGEL 649



 Score = 40.0 bits (92), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 74/376 (19%), Positives = 140/376 (37%), Gaps = 89/376 (23%)

Query: 265 HASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLNDSNTN 324
            A R   ++    +D+F +    I+            NGT     + +S+  +   S+ N
Sbjct: 339 QARRKVGDLKGADADEFKVLKAQIEA----------QNGTKK---QTASNDKTRKKSDKN 385

Query: 325 SESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
            E+Y K  ++DN   DS + R K  ++   +++ +        F ++   + + +     
Sbjct: 386 VENYRKIVVADN---DSEDDRYKTDYRG-RVQDKNVTILPQPMFALSYYERPEEVKRQVN 441

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             +GI  +N  +                + P  L                       + +
Sbjct: 442 YYKGIDDLNARR----------------VLPHRL-----------------------LIT 462

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N  A  + ++  Q  A++ E   AI         EP +    + R +  +  +DF+ A++
Sbjct: 463 NNEASLSEEQVKQHFASIDERTAAIVK-------EPGNVLHYYARALDFYLVQDFDNALK 515

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKK---------AEEAHLK------------- 542
           DL   ++ D     AY    L      EY+K          EE +L+             
Sbjct: 516 DLDEAIRCDSTFFPAYFSRALIYYKQLEYRKRDRKFEVETVEEQNLQVRSYDYNKVREDL 575

Query: 543 --AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
              I+L  +F+ A+ +       + +   AL    + + +D RF+ AY+ RGL    LG 
Sbjct: 576 DRVIELAPDFVYAYYNRGNILAVMKDYRAALVDYNKAIELDPRFADAYYNRGLTNIFLGN 635

Query: 601 HKKAIKDLSSG--LGI 614
           +++ I+DLS    LGI
Sbjct: 636 NRQGIQDLSKAGELGI 651


>gi|186686367|ref|YP_001869563.1| serine/threonin protein kinase [Nostoc punctiforme PCC 73102]
 gi|186468819|gb|ACC84620.1| serine/threonine protein kinase with TPR repeats [Nostoc
           punctiforme PCC 73102]
          Length = 709

 Score = 90.1 bits (222), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 131/282 (46%), Gaps = 3/282 (1%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           F    I+ + +I +     +G    +  +Y  A+ ++++ +   P Y +   G+G     
Sbjct: 320 FIFNHINSNNAIELS---KQGNTLFDLQRYQDALEVYEKAVNIRPDYAQGWNGQGKTLYK 376

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
            ++ + A++ +  AIQ  P   EAW  RG   A+L    EAI    KAL+    S+++ +
Sbjct: 377 LKKSKEALAAYDRAIQIKPDYFEAWSGRGFVLASLQRYQEAIASFDKALQLNNESSEVWN 436

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G        ++ A++     ++L  +N  A+   GLAL +   Y++A  A+ K + L 
Sbjct: 437 AKGEAFSNLNQYDQAIKAYEKAIELKSDNYEAWYKKGLALQNSNRYEEAIAAYQKVVDLK 496

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            ++ +AW +L     +L + + A     + +     + +A+  RG  L  L ++ +AI+ 
Sbjct: 497 PDYEQAWYNLGNALVNLQHYQDAFNAYDKAVQYKSSYYQAWFSRGNTLLNLRRYPEAIES 556

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            +  +  +P++ +  +      H    Y EAIK Y+ A  L+
Sbjct: 557 FNQVIKYNPNSYQAWFNLGWSLHQNQRYEEAIKSYNKAATLK 598



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 134/277 (48%), Gaps = 5/277 (1%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A++ +D+ ++  P Y EA  GRG   A  +  + AI+ F +A+Q N  + E W  +G+A 
Sbjct: 383 ALAAYDRAIQIKPDYFEAWSGRGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAF 442

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
           + L +  +AI+   KA+E + ++ +  +++G+       +  A+      V L  + + A
Sbjct: 443 SNLNQYDQAIKAYEKAIELKSDNYEAWYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQA 502

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +  LG AL ++  Y+ A  A+ KA+Q   ++ +AW        +L    +A+E   QV+ 
Sbjct: 503 WYNLGNALVNLQHYQDAFNAYDKAVQYKSSYYQAWFSRGNTLLNLRRYPEAIESFNQVIK 562

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
            +    +A+   G  LH   ++++AIK  +    +   + +  Y   +  + + +Y +AI
Sbjct: 563 YNPNSYQAWFNLGWSLHQNQRYEEAIKSYNKAATLKSKDYQLWYNLGNSQYILQKYEDAI 622

Query: 640 KDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
             Y+ A+  + D  E +      L  L  +Q  IA Y
Sbjct: 623 ASYNKAVRYKPDHSESWYSRGNALLNLKRFQDAIASY 659



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 101/221 (45%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+  + +A+   P   + W  +G+    L +S EA+    +A++ +P+  +    RG V 
Sbjct: 349 ALEVYEKAVNIRPDYAQGWNGQGKTLYKLKKSKEALAAYDRAIQIKPDYFEAWSGRGFVL 408

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
              + +  A+      ++L+ E+   +   G A S++ +Y +A +A+ KAI+L  +  EA
Sbjct: 409 ASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQYDQAIKAYEKAIELKSDNYEA 468

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           W       Q+    E+A+   Q+V+ +   + +A++  G  L  L  ++ A       + 
Sbjct: 469 WYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQAWYNLGNALVNLQHYQDAFNAYDKAVQ 528

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
              S  +  + R +    +  Y EAI+ ++  +    +S +
Sbjct: 529 YKSSYYQAWFSRGNTLLNLRRYPEAIESFNQVIKYNPNSYQ 569



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 84/174 (48%), Gaps = 7/174 (4%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G  L  +  Y+ A E + KA+ +  ++ + W    +    L  S++AL    + + I   
Sbjct: 337 GNTLFDLQRYQDALEVYEKAVNIRPDYAQGWNGQGKTLYKLKKSKEALAAYDRAIQIKPD 396

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           + +A+  RG +L  L ++++AI      L ++  + E    +   +  + +Y +AIK Y+
Sbjct: 397 YFEAWSGRGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQYDQAIKAYE 456

Query: 644 AALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYW 697
            A++L+ D+ E       A+Y+K +AL  +++       +    D+ P +++ W
Sbjct: 457 KAIELKSDNYE-------AWYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQAW 503



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/171 (23%), Positives = 74/171 (43%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N+A  L ++G   F  + +  A+E     V +  +    +   G  L  + + K+A  A+
Sbjct: 328 NNAIELSKQGNTLFDLQRYQDALEVYEKAVNIRPDYAQGWNGQGKTLYKLKKSKEALAAY 387

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AIQ+  ++ EAW         L   ++A+    + L ++   S+ ++ +G     L Q
Sbjct: 388 DRAIQIKPDYFEAWSGRGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQ 447

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           + +AIK     + +   N E  Y +         Y EAI  Y   +DL+ D
Sbjct: 448 YDQAIKAYEKAIELKSDNYEAWYKKGLALQNSNRYEEAIAAYQKVVDLKPD 498



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 78/168 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+A  N  +Y  AI+ + +++   P Y +A    G A    +  + A + + +A+Q   
Sbjct: 472 KGLALQNSNRYEEAIAAYQKVVDLKPDYEQAWYNLGNALVNLQHYQDAFNAYDKAVQYKS 531

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           S  +AW  RG     L    EAI+  ++ +++ PNS       G    + + +  A++  
Sbjct: 532 SYYQAWFSRGNTLLNLRRYPEAIESFNQVIKYNPNSYQAWFNLGWSLHQNQRYEEAIKSY 591

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           +    L  ++   +  LG +   + +Y+ A  ++ KA++   +  E+W
Sbjct: 592 NKAATLKSKDYQLWYNLGNSQYILQKYEDAIASYNKAVRYKPDHSESW 639



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/232 (21%), Positives = 96/232 (41%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G A  N  +Y  AI  +++ ++      EA   +G A       E AI+ + + +   
Sbjct: 437 AKGEAFSNLNQYDQAIKAYEKAIELKSDNYEAWYKKGLALQNSNRYEEAIAAYQKVVDLK 496

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +AW   G A   L    +A     KA++++ +       RG      + +  A+E 
Sbjct: 497 PDYEQAWYNLGNALVNLQHYQDAFNAYDKAVQYKSSYYQAWFSRGNTLLNLRRYPEAIES 556

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  +K +  +  A+  LG +L     Y++A +++ KA  L     + W +L      L 
Sbjct: 557 FNQVIKYNPNSYQAWFNLGWSLHQNQRYEEAIKSYNKAATLKSKDYQLWYNLGNSQYILQ 616

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             E A+    + +      S++++ RG  L  L + + AI      +   P+
Sbjct: 617 KYEDAIASYNKAVRYKPDHSESWYSRGNALLNLKRFQDAIASYDRAIKYKPN 668



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 74/166 (44%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A VN   Y  A + +D+ ++    Y +A   RG      R    AI  F + I+ NP+
Sbjct: 507 GNALVNLQHYQDAFNAYDKAVQYKSSYYQAWFSRGNTLLNLRRYPEAIESFNQVIKYNPN 566

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           + +AW   G +        EAI+  +KA   +     + +  G   +  + +  A+   +
Sbjct: 567 SYQAWFNLGWSLHQNQRYEEAIKSYNKAATLKSKDYQLWYNLGNSQYILQKYEDAIASYN 626

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
             V+   ++  ++   G AL ++  ++ A  ++ +AI+   N+ +A
Sbjct: 627 KAVRYKPDHSESWYSRGNALLNLKRFQDAIASYDRAIKYKPNYQQA 672



 Score = 40.0 bits (92), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 12/122 (9%)

Query: 75  RAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG----- 129
           R F  + L+ ++  I   DKALQL+    + +  KG AFS L + ++A+  +EK      
Sbjct: 404 RGFVLASLQRYQEAIASFDKALQLNNESSEVWNAKGEAFSNLNQYDQAIKAYEKAIELKS 463

Query: 130 --YEHALHQSADLKQFLELEELLTAAKQDRSVTCEYD-----VSNSMSSLTVSESGLNAN 182
             YE    +   L+     EE + A ++   +  +Y+     + N++ +L   +   NA 
Sbjct: 464 DNYEAWYKKGLALQNSNRYEEAIAAYQKVVDLKPDYEQAWYNLGNALVNLQHYQDAFNAY 523

Query: 183 DK 184
           DK
Sbjct: 524 DK 525


>gi|145483311|ref|XP_001427678.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394760|emb|CAK60280.1| unnamed protein product [Paramecium tetraurelia]
          Length = 456

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 145/288 (50%), Gaps = 5/288 (1%)

Query: 366 KKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           KK+  + I   K+I +     D+  S+G+A     KY  +I  FD+ +K +P Y +    
Sbjct: 110 KKYEESIIEYDKAIELNPNYDDYYNSKGLALQELYKYEESIIEFDKAIKLNPNYDDYYNS 169

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G A    ++ E +I +F +AI+ NP+  + +  +G A     +  E+I +  KA+E  P
Sbjct: 170 KGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEESIIEYDKAIELNP 229

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A+  + +G   +  K +  ++ +    ++L+  +   Y   G AL ++ +Y+++   +
Sbjct: 230 NYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDDYYNIKGNALCNLKKYEESIIEY 289

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            KAI+L+ N+ + +       Q+    E+++    + + +++ +S+ Y  +G  L  L +
Sbjct: 290 DKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQYYCNKGQALCNLKK 349

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           ++++I +    + ++P+  +    +        +Y E+I ++D A++L
Sbjct: 350 YEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIEL 397



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 143/277 (51%), Gaps = 6/277 (2%)

Query: 347 KLSFKWDMLKETSNEAKRN-KKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASA 400
           KL+  +D    +  +A +N KK+  + I   K+I +     D+  S+G A  N+ KY  +
Sbjct: 158 KLNPNYDDYYNSKGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEES 217

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I  +D+ ++ +P Y E    +G A    ++ E +I ++ +AI+ NP+  + +  +G A  
Sbjct: 218 IIEYDKAIELNPNYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDDYYNIKGNALC 277

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            L +  E+I +  KA+E  PN  D  + +G+   +F  +  ++ +    ++L++     Y
Sbjct: 278 NLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQYY 337

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              G AL ++ +Y+++   + KAI+L+ N+ + +       Q+    E+++    + + +
Sbjct: 338 CNKGQALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIEL 397

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
           ++ +S+ Y  +G  L  L +++++I +    + ++P+
Sbjct: 398 NQNYSQYYCNKGQALFNLKKYEESIIEFDKAIKLNPN 434



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 133/267 (49%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D+  S+G A  N  KY  +I  FD+ ++ +P Y +    +G A   Q++ E +I ++ +A
Sbjct: 165 DYYNSKGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEESIIEYDKA 224

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ NP+  E +  +G A   L +  E+I +  KA+E  PN  D  + +G      K +  
Sbjct: 225 IELNPNYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDDYYNIKGNALCNLKKYEE 284

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           ++ +    ++L+      Y   GLAL    +Y+++     KAI+L++N+ + + +  Q  
Sbjct: 285 SIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQYYCNKGQAL 344

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L   E+++    + + ++  +   Y+ +GL L    +++++I +    + ++ +  + 
Sbjct: 345 CNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELNQNYSQY 404

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
              +      + +Y E+I ++D A+ L
Sbjct: 405 YCNKGQALFNLKKYEESIIEFDKAIKL 431



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 157/327 (48%), Gaps = 25/327 (7%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           +  ++G A  N  KY  +I  +D+ ++ +P Y +    +G A     + E +I +F +AI
Sbjct: 98  YYCNKGNALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQELYKYEESIIEFDKAI 157

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           + NP+  + +  +GQA   L +  E+I +  KA+E  PN  D  + +G      K +  +
Sbjct: 158 KLNPNYDDYYNSKGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYEES 217

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG------- 555
           + +    ++L+      Y   G AL ++ +Y+++   + KAI+L+ N  + +        
Sbjct: 218 IIEYDKAIELNPNYAEYYNSKGYALYNLKKYEESIIEYDKAIELNPNDDDYYNIKGNALC 277

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           +L ++ + +   +KA+E       ++  +   Y+ +GL L    +++++I +    + ++
Sbjct: 278 NLKKYEESIIEYDKAIE-------LNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIELN 330

Query: 616 P--SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTA 673
              S   C   +A C   + +Y E+I +YD A++L  +  + +  + LA   +E   Y  
Sbjct: 331 QNYSQYYCNKGQALC--NLKKYEESIIEYDKAIELNPNYDDYYNSKGLAL--QEFYKYEE 386

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKR 700
           S I      FD   +++  + +Y+C +
Sbjct: 387 SIIE-----FDKAIELNQNYSQYYCNK 408



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/241 (20%), Positives = 116/241 (48%), Gaps = 14/241 (5%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P+    +G A    ++ E +I ++ +AI+ NP+  + +  +G A   L +  E+I +  K
Sbjct: 96  PQYYCNKGNALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQELYKYEESIIEFDK 155

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A++  PN  D  + +G      K +  ++ +    ++L+      Y   G AL +  +Y+
Sbjct: 156 AIKLNPNYDDYYNSKGQALQNLKKYEESIIEFDKAIELNPNYDDYYNSKGNALCNQKKYE 215

Query: 535 KAEEAHLKAIQLDRNFLEAWG-------HLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
           ++   + KAI+L+ N+ E +        +L ++ + +   +KA+E       ++      
Sbjct: 216 ESIIEYDKAIELNPNYAEYYNSKGYALYNLKKYEESIIEYDKAIE-------LNPNDDDY 268

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y+++G  L  L +++++I +    + ++P+  +    +        +Y E+I ++D A++
Sbjct: 269 YNIKGNALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAIE 328

Query: 648 L 648
           L
Sbjct: 329 L 329



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 60/115 (52%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           +  ++G A  N  KY  +I  +D+ ++ +P Y +    +G A     + E +I +F +AI
Sbjct: 336 YYCNKGQALCNLKKYEESIIEYDKAIELNPNYDDYYNSKGLALQEFYKYEESIIEFDKAI 395

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + N +  + +  +GQA   L +  E+I +  KA++  PN AD    +G+ N  FK
Sbjct: 396 ELNQNYSQYYCNKGQALFNLKKYEESIIEFDKAIKLNPNDADSHFNKGVNNEVFK 450


>gi|390439560|ref|ZP_10227951.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis sp. T1-4]
 gi|389837049|emb|CCI32075.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis sp. T1-4]
          Length = 317

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 117/241 (48%), Gaps = 5/241 (2%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           ++S+ + + +  GI Q+  G Y  A+  F+Q L+++     A   R     + ++   A 
Sbjct: 42  ARSVHLSYWMRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYLQDYLHAW 101

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            D T ++Q       A+  RG A   LG+  +A+ D ++ ++ +P      + RG+V   
Sbjct: 102 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIQLKPTYYQAYYNRGLVQAA 161

Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            K++  A+ D +  ++     +     + Y   GLA  ++  +  A+    +A++L++N 
Sbjct: 162 MKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLAHLALHNFTSAKADFHQALRLNKNN 221

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +L      L   E+++  L + + ID  ++ AY  RGLL H LG ++ A+ DL+ 
Sbjct: 222 ASAYYNLACTAHQLGEYERSIADLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281

Query: 611 G 611
           G
Sbjct: 282 G 282



 Score = 51.6 bits (122), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 56/259 (21%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W R G  +   G   +A+QD +++LE E N A     R +     +D+  A +D +  ++
Sbjct: 50  WMRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYLQDYLHAWQDCTRSLQ 109

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
              +N  AY + GLA   +G+Y +A   + + IQL             +YQ         
Sbjct: 110 QQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIQLK----------PTYYQ--------- 150

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL----GIDPSNIECLYL-RA 626
                          AY+ RGL+   +  +  A+ D +  L       P  +  +Y  R 
Sbjct: 151 ---------------AYYNRGLVQAAMKNYPLALADFNQSLRQITNQQPDTLATIYNDRG 195

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV-LQCLAF----YQKEIALYTASKINSEFC 681
             + A+  +  A  D+  AL L  ++   +  L C A     Y++ IA      +N    
Sbjct: 196 LAHLALHNFTSAKADFHQALRLNKNNASAYYNLACTAHQLGEYERSIA-----DLNRAIA 250

Query: 682 WFDIDGDIDPLFKEYWCKR 700
                  IDP + + + +R
Sbjct: 251 -------IDPFYADAYIRR 262


>gi|218438974|ref|YP_002377303.1| hypothetical protein PCC7424_2005 [Cyanothece sp. PCC 7424]
 gi|218171702|gb|ACK70435.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
          Length = 512

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 139/293 (47%), Gaps = 9/293 (3%)

Query: 329 SKSSISDNKSSDSTESRSKL----SFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFR 384
           S  S+   K+ D    R +      FKW +  +T  +   N+ F VT ++K++    D  
Sbjct: 209 SSLSVEQQKTVDEIAERERTVRINHFKWGIPVQTYLD---NQSFIVTSMAKTQQ--ADKL 263

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +  G    N+G+Y  AI  +++ L+    Y EA  G G +       + AI  + +A++ 
Sbjct: 264 VEEGKQLRNQGQYEEAIESYNKALEFKSDYHEAWYGLGYSLNELERYQKAIESYNKALEF 323

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
                EAW   G +   L    EAI+  +KALEF+ +  +  +  G    + + +  A+E
Sbjct: 324 KSDYHEAWYGLGYSLNELERYQEAIESYNKALEFKSDYHEAWYGLGYSLNELERYQEAIE 383

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
             +  ++   +   A+  LG +L+ +  Y++A +++ KA++   ++ EAW       + L
Sbjct: 384 SYNKALEFKSDYHEAWYGLGYSLNKLERYQEAIKSYDKALEFKSDYHEAWYGRGVSLRRL 443

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              ++A++   + L ID      ++ RGL L  L ++++AIK     L IDP+
Sbjct: 444 ERYDEAIQSYDKALEIDPNNPLYWNSRGLSLQNLKRYEEAIKSYDKALEIDPN 496



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 96/202 (47%), Gaps = 7/202 (3%)

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  A+E  +  ++   +   A+  LG +L+ +  Y+KA E++ KA++   ++ EAW  L 
Sbjct: 276 YEEAIESYNKALEFKSDYHEAWYGLGYSLNELERYQKAIESYNKALEFKSDYHEAWYGLG 335

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
               +L   ++A+E   + L     + +A++  G  L+ L ++++AI+  +  L      
Sbjct: 336 YSLNELERYQEAIESYNKALEFKSDYHEAWYGLGYSLNELERYQEAIESYNKALEFKSDY 395

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINS 678
            E  Y      + +  Y+EAIK YD AL+ + D  E       A+Y + ++L    + + 
Sbjct: 396 HEAWYGLGYSLNKLERYQEAIKSYDKALEFKSDYHE-------AWYGRGVSLRRLERYDE 448

Query: 679 EFCWFDIDGDIDPLFKEYWCKR 700
               +D   +IDP    YW  R
Sbjct: 449 AIQSYDKALEIDPNNPLYWNSR 470


>gi|168179691|ref|ZP_02614355.1| tetratricopeptide repeat family protein [Clostridium botulinum NCTC
           2916]
 gi|182669311|gb|EDT81287.1| tetratricopeptide repeat family protein [Clostridium botulinum NCTC
           2916]
          Length = 251

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 34/221 (15%)

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +  +++  I  +T +I+  PS  +A+  R +    LGE  ++I D +K LE  P   D  
Sbjct: 34  YSSDIKDKIKFYTISIKLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCY 93

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + R IV +  K+++ +++DL   V +DK  K+ Y   G+    I +YK+A     KAI  
Sbjct: 94  NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIH- 152

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
                E W                            R S+AY  R    + L ++  +IK
Sbjct: 153 -----EDW----------------------------RDSEAYENRAFTYYNLKKYSSSIK 179

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           D ++ L + P N      R + Y+ I  Y  AI DY  AL+
Sbjct: 180 DYTNALKLTPENKNIYLNRGTIYYKIKNYENAISDYMKALN 220



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 62/119 (52%)

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +GEY K+   + K ++L+    + + +    Y  + N +K+L+ L  ++ +DK +   Y 
Sbjct: 69  LGEYNKSIADYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYF 128

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            RG++  G+  +K+A  + +  +  D  + E    RA  Y+ + +Y  +IKDY  AL L
Sbjct: 129 NRGMVFLGIEDYKRAAIEFTKAIHEDWRDSEAYENRAFTYYNLKKYSSSIKDYTNALKL 187



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 59/135 (43%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I       Y  ++   D ++  D  Y      RG       + + A  +FT+AI  +
Sbjct: 95  NRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHED 154

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EA++ R      L +   +I+D + AL+  P + +I   RG + +K K++  A+ D
Sbjct: 155 WRDSEAYENRAFTYYNLKKYSSSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYENAISD 214

Query: 506 LSACVKLDKENKSAY 520
               +   +++ S Y
Sbjct: 215 YMKALNCKEKDPSFY 229



 Score = 46.6 bits (109), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 37/187 (19%), Positives = 79/187 (42%), Gaps = 1/187 (0%)

Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           S++ K   KF    I K K   +D   +R       G+Y  +I+ +++IL+ +P   +  
Sbjct: 35  SSDIKDKIKFYTISI-KLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCY 93

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
             R       +  + ++ D    +  +      +  RG     + +   A  + +KA+  
Sbjct: 94  NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHE 153

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           +   ++    R    +  K ++++++D +  +KL  ENK+ Y   G     I  Y+ A  
Sbjct: 154 DWRDSEAYENRAFTYYNLKKYSSSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYENAIS 213

Query: 539 AHLKAIQ 545
            ++KA+ 
Sbjct: 214 DYMKALN 220



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/178 (17%), Positives = 71/178 (39%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I  +   +K  P + +A   R        E   +I+D+ + ++ NP   + +  R     
Sbjct: 42  IKFYTISIKLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCYNNRAIVYY 101

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +    +++QDL   +  + +  +I   RG+V    +D+  A  + +  +  D  +  AY
Sbjct: 102 LIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDWRDSEAY 161

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
                   ++ +Y  + + +  A++L       + +    Y  + N E A+    + L
Sbjct: 162 ENRAFTYYNLKKYSSSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYENAISDYMKAL 219


>gi|189183309|ref|YP_001937094.1| TPR repeat-containing protein 01_03 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189180080|dbj|BAG39860.1| TPR repeat-containing protein 01_03 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 379

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 123/250 (49%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  AI  FD  +K D  Y  A  G+G A     +L  A+ ++  AI+ NP   EA+  +
Sbjct: 55  KYQEAIENFDIAIKYDSSYASAYNGKGMALDDLGKLLEAVENYDLAIKYNPHFAEAYNNK 114

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
             +    G++ EAI     A++++P      + +G    +   +  A+E+    +K +  
Sbjct: 115 AVSYRKFGKNKEAIILCDLAIQYKPYFVGAYNNKGASLARLGQYEDAMENYDIAIKYEPN 174

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           N  AY   G+AL ++G  ++A E +  AI+   N+ EA+ +       L   + A+E   
Sbjct: 175 NPEAYYNKGIALMNLGYIQEAIENYDIAIRYRPNYSEAYHNKGLTLAILGQLQSAIEHFD 234

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
             +  D     AY  +  +L+ L ++ +A++  +  + IDP+  +  Y++   +  +G++
Sbjct: 235 LAIKYDPNDLNAYCNKSYVLNLLKRYSEAMESCNIAIKIDPNCADSYYIKGMIFEKLGKH 294

Query: 636 REAIKDYDAA 645
           ++AIK+YD A
Sbjct: 295 QDAIKNYDIA 304



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 106/225 (47%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GK   AI + D  ++  P +  A   +G + A   + E A+ ++  AI+  P+  EA+  
Sbjct: 122 GKNKEAIILCDLAIQYKPYFVGAYNNKGASLARLGQYEDAMENYDIAIKYEPNNPEAYYN 181

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   LG   EAI++   A+ + PN ++  H +G+         +A+E     +K D 
Sbjct: 182 KGIALMNLGYIQEAIENYDIAIRYRPNYSEAYHNKGLTLAILGQLQSAIEHFDLAIKYDP 241

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            + +AY      L+ +  Y +A E+   AI++D N  +++      ++ L   + A++  
Sbjct: 242 NDLNAYCNKSYVLNLLKRYSEAMESCNIAIKIDPNCADSYYIKGMIFEKLGKHQDAIKNY 301

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
                 +  F+K Y  +G+ L  LGQ+ KA ++    +   P+ I
Sbjct: 302 DIAAKYNPNFAKNYLEKGISLVSLGQYSKAKENFKLAIKYMPNFI 346



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 1/200 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GIA +N G    AI  +D  ++  P Y EA   +G   A   +L++AI  F  AI+ +
Sbjct: 181 NKGIALMNLGYIQEAIENYDIAIRYRPNYSEAYHNKGLTLAILGQLQSAIEHFDLAIKYD 240

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  +      L    EA++  + A++ +PN AD  + +G++  K      A+++
Sbjct: 241 PNDLNAYCNKSYVLNLLKRYSEAMESCNIAIKIDPNCADSYYIKGMIFEKLGKHQDAIKN 300

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                K +      Y   G++L S+G+Y KA+E    AI+   NF+  +    +   +L 
Sbjct: 301 YDIAAKYNPNFAKNYLEKGISLVSLGQYSKAKENFKLAIKYMPNFIAEYEATIKRLTELE 360

Query: 566 NSEKALECLQQVLYIDKRFS 585
           N   A E  +Q L I K++S
Sbjct: 361 NFTIAKE-FEQKLQILKKYS 379



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 7/216 (3%)

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            K K +  A+E+    +K D    SAY   G+AL  +G+  +A E +  AI+ + +F EA
Sbjct: 51  LKLKKYQEAIENFDIAIKYDSSYASAYNGKGMALDDLGKLLEAVENYDLAIKYNPHFAEA 110

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           + +    Y+    +++A+      +     F  AY+ +G  L  LGQ++ A+++    + 
Sbjct: 111 YNNKAVSYRKFGKNKEAIILCDLAIQYKPYFVGAYNNKGASLARLGQYEDAMENYDIAIK 170

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTA 673
            +P+N E  Y +      +G  +EAI++YD A+    +  E       A++ K + L   
Sbjct: 171 YEPNNPEAYYNKGIALMNLGYIQEAIENYDIAIRYRPNYSE-------AYHNKGLTLAIL 223

Query: 674 SKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEK 709
            ++ S    FD+    DP     +C + +  N+ ++
Sbjct: 224 GQLQSAIEHFDLAIKYDPNDLNAYCNKSYVLNLLKR 259



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARI----ELAKLC-SLRNWSKAIRILDSLLAQS 66
           +L K  + I   D  ++ DS  ASA   +     +L KL  ++ N+  AI+  +   A++
Sbjct: 52  KLKKYQEAIENFDIAIKYDSSYASAYNGKGMALDDLGKLLEAVENYDLAIK-YNPHFAEA 110

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
           Y      N+A  Y +   +K  I  CD A+Q  P  + AY  KG + + LG+ E+A+  +
Sbjct: 111 YN-----NKAVSYRKFGKNKEAIILCDLAIQYKPYFVGAYNNKGASLARLGQYEDAMENY 165

Query: 127 E 127
           +
Sbjct: 166 D 166



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDI---CNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
           L  L     AI   D  LA  Y+  D+   CN+++  + L+ +   +  C+ A+++DP  
Sbjct: 220 LAILGQLQSAIEHFD--LAIKYDPNDLNAYCNKSYVLNLLKRYSEAMESCNIAIKIDPNC 277

Query: 103 LQAYILKGCAFSALGRKEEALSVWE 127
             +Y +KG  F  LG+ ++A+  ++
Sbjct: 278 ADSYYIKGMIFEKLGKHQDAIKNYD 302


>gi|290988656|ref|XP_002677013.1| predicted protein [Naegleria gruberi]
 gi|284090618|gb|EFC44269.1| predicted protein [Naegleria gruberi]
          Length = 307

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 12/243 (4%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+        + A+  F + ++ DP +  A   RG       E E AI DF++AI  +
Sbjct: 57  NRGVTYSEMSDNSKAMDDFSRAIELDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLD 116

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  + +  RG +  A+GE   A+ D +K +E EP S D  + RG ++F ++  + A++D
Sbjct: 117 PNFSDFYYNRGNSYCAIGEYENAMSDYTKCIELEP-SFDCYYNRGNLHFGYQSIDKAIDD 175

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  ++L  +   ++ + G A   I  Y  A     +AI+L+ NF   + +    +    
Sbjct: 176 FTKSIELKSDFSMSWMHRGNAYCKISNYDLAIVDLTRAIELNPNFPGGYFNRGIAFTLTK 235

Query: 566 NSEKALECLQQVLYIDKRF-----------SKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           +  KAL+   +V+ I               + AYHLRG +   + + +KA  D    + +
Sbjct: 236 DYSKALDDFTRVIEIVPTLGPHMEMLLPLHASAYHLRGNVYQNMQETEKAQLDFKKAIEL 295

Query: 615 DPS 617
           +P+
Sbjct: 296 NPA 298



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 125/250 (50%), Gaps = 8/250 (3%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ--SNPSA-GEAWKRRGQARA 460
           F+++++ +P   +A   RG      R+ + AI DFT+AI   S P+   +    RG   +
Sbjct: 4   FNRVIENEPNLGDAYSQRGLIYQITRQGDLAIEDFTKAISLLSAPNVLSKLHYNRGVTYS 63

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            + ++ +A+ D S+A+E +P+     + RG++  + ++   A++D S  + LD      Y
Sbjct: 64  EMSDNSKAMDDFSRAIELDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLDPNFSDFY 123

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQDLANSEKALECLQQVL 578
              G +  +IGEY+ A   + K I+L+ +F   +  G+L   YQ +   +KA++   + +
Sbjct: 124 YNRGNSYCAIGEYENAMSDYTKCIELEPSFDCYYNRGNLHFGYQSI---DKAIDDFTKSI 180

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            +   FS ++  RG     +  +  AI DL+  + ++P+     + R   +    +Y +A
Sbjct: 181 ELKSDFSMSWMHRGNAYCKISNYDLAIVDLTRAIELNPNFPGGYFNRGIAFTLTKDYSKA 240

Query: 639 IKDYDAALDL 648
           + D+   +++
Sbjct: 241 LDDFTRVIEI 250



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 105/232 (45%), Gaps = 4/232 (1%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF--EPNSADILH-ERGI 491
           + DF   I++ P+ G+A+ +RG       +   AI+D +KA+     PN    LH  RG+
Sbjct: 1   MDDFNRVIENEPNLGDAYSQRGLIYQITRQGDLAIEDFTKAISLLSAPNVLSKLHYNRGV 60

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
              +  D + A++D S  ++LD    +AY   GL  + + E + A +   KAI LD NF 
Sbjct: 61  TYSEMSDNSKAMDDFSRAIELDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLDPNFS 120

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           + + +    Y  +   E A+    + + ++  F   Y+ RG L  G     KAI D +  
Sbjct: 121 DFYYNRGNSYCAIGEYENAMSDYTKCIELEPSFD-CYYNRGNLHFGYQSIDKAIDDFTKS 179

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +          R + Y  I  Y  AI D   A++L  +    +  + +AF
Sbjct: 180 IELKSDFSMSWMHRGNAYCKISNYDLAIVDLTRAIELNPNFPGGYFNRGIAF 231



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 25/217 (11%)

Query: 355 LKETSNEAKRNKKFCVTRISK--------SKSISVD-----FRLSRGIAQVNEGKYASAI 401
           L  + + A  N+    TR+ +        SK+I +D     F  +RG +    G+Y +A+
Sbjct: 81  LDPSFHAAYNNRGLLYTRMEEEELAIKDFSKAIDLDPNFSDFYYNRGNSYCAIGEYENAM 140

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           S + + ++ +P + +    RG      + ++ AI DFT++I+       +W  RG A   
Sbjct: 141 SDYTKCIELEPSF-DCYYNRGNLHFGYQSIDKAIDDFTKSIELKSDFSMSWMHRGNAYCK 199

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK---------- 511
           +     AI DL++A+E  PN       RGI     KD++ A++D +  ++          
Sbjct: 200 ISNYDLAIVDLTRAIELNPNFPGGYFNRGIAFTLTKDYSKALDDFTRVIEIVPTLGPHME 259

Query: 512 -LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            L   + SAY   G    ++ E +KA+    KAI+L+
Sbjct: 260 MLLPLHASAYHLRGNVYQNMQETEKAQLDFKKAIELN 296



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 14/126 (11%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +   +KS  +  DF +S   RG A      Y  AI    + ++ +P +P     RG A 
Sbjct: 172 AIDDFTKSIELKSDFSMSWMHRGNAYCKISNYDLAIVDLTRAIELNPNFPGGYFNRGIAF 231

Query: 426 AFQRELEAAISDFTEAIQSNPSAGE-----------AWKRRGQARAALGESVEAIQDLSK 474
              ++   A+ DFT  I+  P+ G            A+  RG     + E+ +A  D  K
Sbjct: 232 TLTKDYSKALDDFTRVIEIVPTLGPHMEMLLPLHASAYHLRGNVYQNMQETEKAQLDFKK 291

Query: 475 ALEFEP 480
           A+E  P
Sbjct: 292 AIELNP 297



 Score = 43.1 bits (100), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++ ++S+AI  LD     +Y      NR   Y+++E  +  I+D  KA+ LDP     Y 
Sbjct: 71  AMDDFSRAIE-LDPSFHAAYN-----NRGLLYTRMEEEELAIKDFSKAIDLDPNFSDFYY 124

Query: 108 LKGCAFSALGRKEEALSVWEK 128
            +G ++ A+G  E A+S + K
Sbjct: 125 NRGNSYCAIGEYENAMSDYTK 145


>gi|383123017|ref|ZP_09943703.1| hypothetical protein BSIG_0243 [Bacteroides sp. 1_1_6]
 gi|251841890|gb|EES69970.1| hypothetical protein BSIG_0243 [Bacteroides sp. 1_1_6]
          Length = 683

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 46/291 (15%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D  EAI+ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKVNLEDYQGAEADCDEAIKRNPFVVGAYQVRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD++AA EDL + +K+    
Sbjct: 98  LARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLK----AIQLDRNFLEAWG----------------- 555
             AY   G     +   +K   A LK    A++LD+   +AW                  
Sbjct: 158 TRAYLMRG----EVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNYAEAES 213

Query: 556 ------HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
                 HL+             +F+Q+  N   A+      L ID      ++ RGLL  
Sbjct: 214 DLDRAIHLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFIGHYNRGLLRA 271

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            +G   +AI+D    + ++P N+  ++ RA      G+YR AIKDY   +D
Sbjct: 272 RVGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKDYTTVID 322



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 6/268 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ + K+  AI  + + L  DP           +   +++ +AA  D    ++ +P
Sbjct: 96  RGLARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSP 155

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG+      ++V A++D + ALE +    D    R IV  +  ++  A  DL
Sbjct: 156 RYTRAYLMRGEVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNYAEAESDL 215

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
              + L  +N   Y    LA       + A   +  A+ +D  NF+   GH  +      
Sbjct: 216 DRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFI---GHYNRGLLRAR 272

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + +  +A+E    V+ ++     A   R LL    G ++ AIKD ++ +   P+ +   Y
Sbjct: 273 VGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKDYTTVIDQYPNFLAGYY 332

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            RA     IG+ + A +D    L  +LD
Sbjct: 333 HRAEARKKIGDKKGAEQDDFKLLKAQLD 360



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ +  YA A S  D+ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVRLQQSNYAEAESDLDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  R ++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y +   A   IG+ K AE+   K +  QLD+
Sbjct: 317 YTTVIDQYPNFLAGYYHRAEARKKIGDKKGAEQDDFKLLKAQLDK 361



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A+  F+  L+ D   P+A   R   R  Q     A SD   AI  
Sbjct: 162 LMRGEVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNYAEAESDLDRAIHL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           D    ++++ +N  A     L  +  G+Y+ A + +   I    NFL  + H
Sbjct: 282 DFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKDYTTVIDQYPNFLAGYYH 333



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 9/236 (3%)

Query: 458 ARAAL--GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           AR AL   + V +IQ  ++ +  +P   +    R +     +D+  A  D    +K +  
Sbjct: 29  ARNALYFEDYVLSIQYFNQVINAKPYLYEPYFFRALAKVNLEDYQGAEADCDEAIKRNPF 88

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   GLA     ++  A E + KA+  D   +  W +LT  +    + + A E L+
Sbjct: 89  VVGAYQVRGLARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLE 148

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            +L +  R+++AY +RG +         A+KD ++ L +D  + +    RA        Y
Sbjct: 149 SLLKVSPRYTRAYLMRGEVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNY 208

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
            EA  D D A+ L   +   ++ + LA + +       + +      +D+  DIDP
Sbjct: 209 AEAESDLDRAIHLSAKNAGNYINRALARFHQ-------NNLRGAMSDYDLALDIDP 257



 Score = 45.1 bits (105), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AIQ +P   +A+  RG     LG
Sbjct: 592 LDKVITLAPDFVYAYYNRANVAAMLKDYRAAIVDYDKAIQLSPDFADAYFNRGLTHIFLG 651

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            +   I DLSKA E    SA
Sbjct: 652 NNKAGISDLSKAGELGVVSA 671



 Score = 42.7 bits (99), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   IQ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   R   RA  G+   AI+D +  ++  PN     + R     K  D   A +
Sbjct: 290 EPDNMMAIFNRALLRAQTGDYRGAIKDYTTVIDQYPNFLAGYYHRAEARKKIGDKKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  LDK+N
Sbjct: 350 DDFKLLKAQLDKQN 363



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 27/153 (17%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
           R I  +  +DF++AV DL+  + LD +   AY    L      EY+KAE+A         
Sbjct: 516 RAIDFYLVQDFSSAVADLTQAILLDGDFFPAYFMRALIRCKQLEYQKAEQAAEADMPSGA 575

Query: 542 ------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
                             K I L  +F+ A+ +       L +   A+    + + +   
Sbjct: 576 AVKEVSAVDYEVVRKDLDKVITLAPDFVYAYYNRANVAAMLKDYRAAIVDYDKAIQLSPD 635

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           F+ AY  RGL    LG +K  I DLS    LG+
Sbjct: 636 FADAYFNRGLTHIFLGNNKAGISDLSKAGELGV 668


>gi|124003389|ref|ZP_01688239.1| TPR repeat, putative [Microscilla marina ATCC 23134]
 gi|123991487|gb|EAY30918.1| TPR repeat, putative [Microscilla marina ATCC 23134]
          Length = 318

 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 4/224 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GIA  N G Y+ AI  +++ +  D +  +A   R  AR    +L  A++D+   +     
Sbjct: 73  GIALFNMGNYSRAIHHYNKAIALDSVLMDAYYNRANARFASDDLSGALADYNVVVAQYQD 132

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           +   + RR      L    +AI+DL K +  EPN++D L  RG + +K K + AA +DL 
Sbjct: 133 SSYVFFRRATTYMQLKRYDDAIKDLDKVIGLEPNNSDALGSRGYLLYKVKKYEAAAKDLQ 192

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW--GHLTQFYQDLA 565
             ++L+K    AY  LGL  ++ G+   A     KA+++  N +EA+  G+    Y +  
Sbjct: 193 KAIELNKRQDLAYANLGLVKAAQGDTMAAFVQLGKALEI--NVVEAYILGNRAWLYAESN 250

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             +K+ + +++ L  D +   AY  RG+     G  +KA+ D +
Sbjct: 251 QLDKSWKDIEEALKYDDKSGWAYFARGVYYLKKGAAQKALDDFA 294



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 118/283 (41%), Gaps = 5/283 (1%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           FC  + SK     V+  L +G   + + +Y  AI  + + +K D  + E     G A   
Sbjct: 20  FCACQSSKYDQGMVNLFL-KGNVNLKKQQYKQAIYYYTEGIKRDSSFSEIYNNLGIALFN 78

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
                 AI  + +AI  +    +A+  R  AR A  +   A+ D +  +    +S+ +  
Sbjct: 79  MGNYSRAIHHYNKAIALDSVLMDAYYNRANARFASDDLSGALADYNVVVAQYQDSSYVFF 138

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            R     + K ++ A++DL   + L+  N  A    G  L  + +Y+ A +   KAI+L+
Sbjct: 139 RRATTYMQLKRYDDAIKDLDKVIGLEPNNSDALGSRGYLLYKVKKYEAAAKDLQKAIELN 198

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL--RGLLLHGLGQHKKAI 605
           +    A+ +L        ++  A   L + L I+    +AY L  R  L     Q  K+ 
Sbjct: 199 KRQDLAYANLGLVKAAQGDTMAAFVQLGKALEIN--VVEAYILGNRAWLYAESNQLDKSW 256

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           KD+   L  D  +    + R   Y   G  ++A+ D+  A  L
Sbjct: 257 KDIEEALKYDDKSGWAYFARGVYYLKKGAAQKALDDFAKARKL 299



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 4/176 (2%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           V FR  R    +   +Y  AI   D+++  +P   +AL  RG      ++ EAA  D  +
Sbjct: 136 VFFR--RATTYMQLKRYDDAIKDLDKVIGLEPNNSDALGSRGYLLYKVKKYEAAAKDLQK 193

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI+ N     A+   G  +AA G+++ A   L KALE     A IL  R  +  +    +
Sbjct: 194 AIELNKRQDLAYANLGLVKAAQGDTMAAFVQLGKALEINVVEAYILGNRAWLYAESNQLD 253

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF--LEAW 554
            + +D+   +K D ++  AY   G+     G  +KA +   KA +L ++   LEA+
Sbjct: 254 KSWKDIEEALKYDDKSGWAYFARGVYYLKKGAAQKALDDFAKARKLTKHLTDLEAY 309


>gi|365901831|ref|ZP_09439657.1| TPR repeat protein [Bradyrhizobium sp. STM 3843]
 gi|365417441|emb|CCE12199.1| TPR repeat protein [Bradyrhizobium sp. STM 3843]
          Length = 732

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 121/271 (44%), Gaps = 2/271 (0%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           G++  A++ +D+ L   P YPEAL  RG   +A  R +E A+  + +A+   P   EA  
Sbjct: 124 GRFDEALAYYDRALALQPAYPEALNNRGVVLQALGRHVE-ALESYAKALALRPDFVEALV 182

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG   + L    EA+ D   AL  EP   D+L+ R I   +      A+   SA + L 
Sbjct: 183 NRGLTYSELARFEEALADYDGALALEPKHVDVLNNRAIALRRLGRPEEALASHSAALALR 242

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            ++  A    GL L  +   + A+  + +AI L    ++A+ +      +L   ++AL  
Sbjct: 243 PKDPKALVSRGLTLHDLKRTEAAQADYDRAIALQPGHVDAFVNRGALLHELGRHDEALRS 302

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
            ++ L +      A   RG++LH L ++ +A+ D    + I P +   L  R    H + 
Sbjct: 303 FERALALQPDNVHALTNRGVVLHDLARYGEALADHDQAISIQPGDAAALNNRGVTLHKLR 362

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
              EA+   D A+    D  E  V + +  Y
Sbjct: 363 RLEEALASQDQAISARQDYPEALVNRGIILY 393



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 134/334 (40%), Gaps = 39/334 (11%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K+ S++V       +     GK   A     +IL  DP     L   G     +   + A
Sbjct: 2   KTVSLTVSQVFDIALKAYAAGKLGQAEKTCLKILSADPASAITLNLLGVIHMARGRNQLA 61

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           ++ +  A+   P   EAW  RG    A+G   +A+    +AL    + A +++ R  V  
Sbjct: 62  LAHYDRALALRPDFVEAWSNRGALLKAMGRQADALDSFDRALALRADHAGVINNRAGVLQ 121

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           +   F+ A+      + L      A    G+ L ++G + +A E++ KA+ L  +F+EA 
Sbjct: 122 ELGRFDEALAYYDRALALQPAYPEALNNRGVVLQALGRHVEALESYAKALALRPDFVEAL 181

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRF------------------------------ 584
            +    Y +LA  E+AL      L ++ +                               
Sbjct: 182 VNRGLTYSELARFEEALADYDGALALEPKHVDVLNNRAIALRRLGRPEEALASHSAALAL 241

Query: 585 ----SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
                KA   RGL LH L + + A  D    + + P +++    R +  H +G + EA++
Sbjct: 242 RPKDPKALVSRGLTLHDLKRTEAAQADYDRAIALQPGHVDAFVNRGALLHELGRHDEALR 301

Query: 641 DYDAALDLELDSMEKF-----VLQCLAFYQKEIA 669
            ++ AL L+ D++        VL  LA Y + +A
Sbjct: 302 SFERALALQPDNVHALTNRGVVLHDLARYGEALA 335



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 113/276 (40%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+     G++  A+  + + L   P + EAL+ RG   +     E A++D+  A+   
Sbjct: 149 NRGVVLQALGRHVEALESYAKALALRPDFVEALVNRGLTYSELARFEEALADYDGALALE 208

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +    R  A   LG   EA+   S AL   P     L  RG+     K   AA  D
Sbjct: 209 PKHVDVLNNRAIALRRLGRPEEALASHSAALALRPKDPKALVSRGLTLHDLKRTEAAQAD 268

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L   +  A+   G  L  +G + +A  +  +A+ L  + + A  +      DLA
Sbjct: 269 YDRAIALQPGHVDAFVNRGALLHELGRHDEALRSFERALALQPDNVHALTNRGVVLHDLA 328

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +AL    Q + I    + A + RG+ LH L + ++A+      +       E L  R
Sbjct: 329 RYGEALADHDQAISIQPGDAAALNNRGVTLHKLRRLEEALASQDQAISARQDYPEALVNR 388

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
               + +  + EA  DYD A+    D  +   L+ L
Sbjct: 389 GIILYDLKRFDEAQADYDRAIAQRADYADAHFLKGL 424



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 95/214 (44%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD   +R IA    G+   A++     L   P  P+AL+ RG      +  EAA +D+  
Sbjct: 212 VDVLNNRAIALRRLGRPEEALASHSAALALRPKDPKALVSRGLTLHDLKRTEAAQADYDR 271

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI   P   +A+  RG     LG   EA++   +AL  +P++   L  RG+V      + 
Sbjct: 272 AIALQPGHVDAFVNRGALLHELGRHDEALRSFERALALQPDNVHALTNRGVVLHDLARYG 331

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+ D    + +   + +A    G+ L  +   ++A  +  +AI   +++ EA  +    
Sbjct: 332 EALADHDQAISIQPGDAAALNNRGVTLHKLRRLEEALASQDQAISARQDYPEALVNRGII 391

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
             DL   ++A     + +     ++ A+ L+GL+
Sbjct: 392 LYDLKRFDEAQADYDRAIAQRADYADAHFLKGLV 425



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 61/155 (39%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD  ++RG      G++  A+  F++ L   P    AL  RG           A++D  +
Sbjct: 280 VDAFVNRGALLHELGRHDEALRSFERALALQPDNVHALTNRGVVLHDLARYGEALADHDQ 339

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI   P    A   RG     L    EA+    +A+    +  + L  RGI+ +  K F+
Sbjct: 340 AISIQPGDAAALNNRGVTLHKLRRLEEALASQDQAISARQDYPEALVNRGIILYDLKRFD 399

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
            A  D    +    +   A+   GL     G++ +
Sbjct: 400 EAQADYDRAIAQRADYADAHFLKGLVSLVTGDFAQ 434


>gi|260806523|ref|XP_002598133.1| hypothetical protein BRAFLDRAFT_123282 [Branchiostoma floridae]
 gi|229283405|gb|EEN54145.1| hypothetical protein BRAFLDRAFT_123282 [Branchiostoma floridae]
          Length = 1925

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 121/258 (46%), Gaps = 4/258 (1%)

Query: 397  YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
            Y SAI  + Q +K  P   EA   R      + ++  A+ DF +A +  PS  EA  + G
Sbjct: 1254 YTSAIVNYTQAIKLQPDDHEAYYYRAEMYEKKGDMLLALEDFAQATRLMPSRTEAVMKHG 1313

Query: 457  QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                  G  + A+ D +  L+ EPN+A     RG    +   +++AVEDLSA + LD  N
Sbjct: 1314 LYYFNNGNWIGAVNDFTALLQQEPNNAIARTYRGRAYAQQGHYSSAVEDLSAAIHLDPNN 1373

Query: 517  KSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQFYQDLANSEKALECL 574
              A+ + G  L  +   KKA +    +I LD   + ++A  H    Y D+     A+   
Sbjct: 1374 AIAFYHRGCLLRKVHP-KKALQDLSVSILLDDSEDNVKAILHRGILYTDMERWTDAISDF 1432

Query: 575  QQVLYIDKRFSKAYHLRGLL-LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
            +  L +D+  + A+   GL+ LH L  + KAI   +  +  DP+ I     R+  YH I 
Sbjct: 1433 EHALKLDRNLACAHVNLGLIFLHQLENYFKAIGRFTQAIKTDPTYIRAYICRSEAYHKIH 1492

Query: 634  EYREAIKDYDAALDLELD 651
            + ++A+ D   A+ L  D
Sbjct: 1493 KRKQALLDITRAIHLRPD 1510



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 6/266 (2%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            G++ +   +Y  A+  F+  LK +P Y EA   RG  R  + +    I DF  A+  +P 
Sbjct: 1630 GLSHLELFQYMDALEAFNNALKVNPSYAEAYYQRGLTR-LRLKQSKGIQDFNRALALDPY 1688

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              +A+  R       G   +AI + ++A++ +PNS      RG + +  K +  AV+DLS
Sbjct: 1689 IFQAFLSRAAYYGMKGRYTKAIMNCNEAIKLQPNSVRAYLYRGALKYYVKTYKLAVKDLS 1748

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
                +D+    AY    +    + +++KA + +   + L+   L+   +    Y +  + 
Sbjct: 1749 KAASIDRTCSLAYFNRAVCYHEMKDFEKALQDYGIVLLLEEKNLKVLINRGLLYFEQKDY 1808

Query: 568  EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
              AL+       +D +  K  H  GL  H L + + A+   S  + +DP  I+    R +
Sbjct: 1809 RNALQDFMAASQVDVKDPKLCHTVGLCRHKLDKLENAVDSFSQAIQVDPFFIDAYIGRGN 1868

Query: 628  CYHAIGEYREAI----KDYDAALDLE 649
             Y   G + E I    KDY+ AL L+
Sbjct: 1869 VYMDYG-HEEGIIMARKDYEHALRLD 1893



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 44/316 (13%)

Query: 371  TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            TR+  S++ +V   +  G+   N G +  A++ F  +L+++P    A   RG A A Q  
Sbjct: 1299 TRLMPSRTEAV---MKHGLYYFNNGNWIGAVNDFTALLQQEPNNAIARTYRGRAYAQQGH 1355

Query: 431  LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL---EFEPNSADILH 487
              +A+ D + AI  +P+   A+  RG     +    +A+QDLS ++   + E N   ILH
Sbjct: 1356 YSSAVEDLSAAIHLDPNNAIAFYHRGCLLRKVHPK-KALQDLSVSILLDDSEDNVKAILH 1414

Query: 488  ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA-LSSIGEYKKAEEAHLKAIQL 546
             RGI+    + +  A+ D    +KLD+    A+  LGL  L  +  Y KA     +AI+ 
Sbjct: 1415 -RGILYTDMERWTDAISDFEHALKLDRNLACAHVNLGLIFLHQLENYFKAIGRFTQAIKT 1473

Query: 547  DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL----------- 595
            D  ++ A+   ++ Y  +   ++AL  + + +++       Y  RG LL           
Sbjct: 1474 DPTYIRAYICRSEAYHKIHKRKQALLDITRAIHLRPDVQHYYMRRGQLLLQMKNLELASF 1533

Query: 596  ---------HGLG--------------QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
                      GLG              QH KA++ ++    + PS  +   L        
Sbjct: 1534 CVRHASELKDGLGASSTQQAVVQSFLKQHDKAVETMAQACRVKPSP-QMYTLLGKTQMKA 1592

Query: 633  GEYREAIKDYDAALDL 648
             ++ EA+  Y  A+ L
Sbjct: 1593 KQFEEAVGTYKRAIQL 1608



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 120/256 (46%), Gaps = 10/256 (3%)

Query: 421  RGTARAFQRELEAAISDFTEAIQSNPSA------GEAWKRRGQARAALGESVEAIQDLSK 474
            +   ++F ++ + A+    +A +  PS       G+   +  Q   A+G    AIQ L+ 
Sbjct: 1552 QAVVQSFLKQHDKAVETMAQACRVKPSPQMYTLLGKTQMKAKQFEEAVGTYKRAIQLLTP 1611

Query: 475  ALEFEP---NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
                +P    +A++ +  G+ + +   +  A+E  +  +K++     AY   GL    + 
Sbjct: 1612 WQAKQPMPWEAAEVYYYLGLSHLELFQYMDALEAFNNALKVNPSYAEAYYQRGLTRLRLK 1671

Query: 532  EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
            + K  ++ + +A+ LD    +A+     +Y       KA+    + + +     +AY  R
Sbjct: 1672 QSKGIQDFN-RALALDPYIFQAFLSRAAYYGMKGRYTKAIMNCNEAIKLQPNSVRAYLYR 1730

Query: 592  GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            G L + +  +K A+KDLS    ID +     + RA CYH + ++ +A++DY   L LE  
Sbjct: 1731 GALKYYVKTYKLAVKDLSKAASIDRTCSLAYFNRAVCYHEMKDFEKALQDYGIVLLLEEK 1790

Query: 652  SMEKFVLQCLAFYQKE 667
            +++  + + L +++++
Sbjct: 1791 NLKVLINRGLLYFEQK 1806



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 104/242 (42%), Gaps = 11/242 (4%)

Query: 429  RELEAAISD----FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
            REL  A+ D     TE I+          RRG     LG   +A  DLSKA+  EP   D
Sbjct: 1146 RELVEALQDEARQLTERIEREGETAFDLCRRGAINRKLGLLKKAEYDLSKAILLEPKLLD 1205

Query: 485  ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
                R ++    +   AA+EDL+  +K +K++  AY           +Y  A   + +AI
Sbjct: 1206 AYWHRHLLMLVQEKPAAAIEDLNFILKHNKKHVGAYRSRAEVYRKQDDYTSAIVNYTQAI 1265

Query: 545  QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
            +L  +  EA+ +  + Y+   +   ALE   Q   +    ++A    GL     G    A
Sbjct: 1266 KLQPDDHEAYYYRAEMYEKKGDMLLALEDFAQATRLMPSRTEAVMKHGLYYFNNGNWIGA 1325

Query: 605  IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            + D ++ L  +P+N      R   Y   G Y  A++D  AA+ L+ ++        +AFY
Sbjct: 1326 VNDFTALLQQEPNNAIARTYRGRAYAQQGHYSSAVEDLSAAIHLDPNN-------AIAFY 1378

Query: 665  QK 666
             +
Sbjct: 1379 HR 1380



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 18/291 (6%)

Query: 368  FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDP---MYPEALIGRGTA 424
            FCV   S+ K         + + Q    ++  A+    Q  +  P   MY   L+G+   
Sbjct: 1533 FCVRHASELKDGLGASSTQQAVVQSFLKQHDKAVETMAQACRVKPSPQMY--TLLGKTQM 1590

Query: 425  RAFQRELEAAISDFTEAIQ-------SNP---SAGEAWKRRGQARAALGESVEAIQDLSK 474
            +A  ++ E A+  +  AIQ         P    A E +   G +   L + ++A++  + 
Sbjct: 1591 KA--KQFEEAVGTYKRAIQLLTPWQAKQPMPWEAAEVYYYLGLSHLELFQYMDALEAFNN 1648

Query: 475  ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
            AL+  P+ A+  ++RG+   + K  +  ++D +  + LD     A+          G Y 
Sbjct: 1649 ALKVNPSYAEAYYQRGLTRLRLKQ-SKGIQDFNRALALDPYIFQAFLSRAAYYGMKGRYT 1707

Query: 535  KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
            KA     +AI+L  N + A+ +       +   + A++ L +   ID+  S AY  R + 
Sbjct: 1708 KAIMNCNEAIKLQPNSVRAYLYRGALKYYVKTYKLAVKDLSKAASIDRTCSLAYFNRAVC 1767

Query: 595  LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
             H +   +KA++D    L ++  N++ L  R   Y    +YR A++D+ AA
Sbjct: 1768 YHEMKDFEKALQDYGIVLLLEEKNLKVLINRGLLYFEQKDYRNALQDFMAA 1818



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 88/184 (47%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            LSR      +G+Y  AI   ++ +K  P    A + RG  + + +  + A+ D ++A   
Sbjct: 1694 LSRAAYYGMKGRYTKAIMNCNEAIKLQPNSVRAYLYRGALKYYVKTYKLAVKDLSKAASI 1753

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            + +   A+  R      + +  +A+QD    L  E  +  +L  RG++ F+ KD+  A++
Sbjct: 1754 DRTCSLAYFNRAVCYHEMKDFEKALQDYGIVLLLEEKNLKVLINRGLLYFEQKDYRNALQ 1813

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
            D  A  ++D ++      +GL    + + + A ++  +AIQ+D  F++A+      Y D 
Sbjct: 1814 DFMAASQVDVKDPKLCHTVGLCRHKLDKLENAVDSFSQAIQVDPFFIDAYIGRGNVYMDY 1873

Query: 565  ANSE 568
             + E
Sbjct: 1874 GHEE 1877


>gi|420248597|ref|ZP_14751921.1| lipoprotein NlpI, contains TPR repeats [Burkholderia sp. BT03]
 gi|398067510|gb|EJL59012.1| lipoprotein NlpI, contains TPR repeats [Burkholderia sp. BT03]
          Length = 561

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 4/260 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RGIA+     Y +AI  + + +  DP    AL+ RG AR  + + E AI+DFT ++Q 
Sbjct: 102 VDRGIAKQQLADYDAAIDDYSRAIGIDPDDAIALMNRGYARLHKEQFELAIADFTRSVQL 161

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP     +  R  A     + V A+ D   A   EP   +   ERGIV  +   F+ A+E
Sbjct: 162 NPRLSVTYTGRAFAYRNTKQYVAALADYDSAEAIEPLPPNDQVERGIVLAELHRFSEAIE 221

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFLEAWGHLTQFYQ 562
             +  +  D  N  A  Y   A     +   A   +  A+ +  DR        +   + 
Sbjct: 222 RYNIVLAQDPNNYLALIYRAFAFEKQNQVDLAIRDYTTALAVSSDRELTHRMRGIA--FD 279

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                ++A+    + + +  + ++ Y LR        Q+++A +DL++   +DP N++  
Sbjct: 280 KAGRYDEAIADFSEAIRMAPQSARPYVLRARTYRHARQYEQAFEDLATAQRLDPVNLDVY 339

Query: 623 YLRASCYHAIGEYREAIKDY 642
           + RA  +   G + EA+ DY
Sbjct: 340 WDRAQLWEQAGNFAEAVDDY 359



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 5/271 (1%)

Query: 376 SKSISVDFRLS-----RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           ++S+ ++ RLS     R  A  N  +Y +A++ +D     +P+ P   + RG   A    
Sbjct: 156 TRSVQLNPRLSVTYTGRAFAYRNTKQYVAALADYDSAEAIEPLPPNDQVERGIVLAELHR 215

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
              AI  +   +  +P+   A   R  A     +   AI+D + AL    +       RG
Sbjct: 216 FSEAIERYNIVLAQDPNNYLALIYRAFAFEKQNQVDLAIRDYTTALAVSSDRELTHRMRG 275

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           I   K   ++ A+ D S  +++  ++   Y           +Y++A E    A +LD   
Sbjct: 276 IAFDKAGRYDEAIADFSEAIRMAPQSARPYVLRARTYRHARQYEQAFEDLATAQRLDPVN 335

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
           L+ +    Q ++   N  +A++   +++ I      A+  R   L  +G++  A+ D  +
Sbjct: 336 LDVYWDRAQLWEQAGNFAEAVDDYTRIIRIHPLEVDAWMYRADNLTIVGRYDDALSDFDT 395

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
              +DP++   L  +A  +   G + E+  D
Sbjct: 396 AQRLDPTSPYLLLGKARFFFYRGRWAESKAD 426



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 112/282 (39%), Gaps = 33/282 (11%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A+  L +   AI D S+A+  +P+ A  L  RG      + F  A+ D +  V+L+ 
Sbjct: 104 RGIAKQQLADYDAAIDDYSRAIGIDPDDAIALMNRGYARLHKEQFELAIADFTRSVQLNP 163

Query: 515 ENKSAYTYLGLA-------LSSIGEYKKAE--EAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                YT    A       ++++ +Y  AE  E      Q++R  + A         +L 
Sbjct: 164 RLSVTYTGRAFAYRNTKQYVAALADYDSAEAIEPLPPNDQVERGIVLA---------ELH 214

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              +A+E    VL  D     A   R        Q   AI+D ++ L +         +R
Sbjct: 215 RFSEAIERYNIVLAQDPNNYLALIYRAFAFEKQNQVDLAIRDYTTALAVSSDRELTHRMR 274

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIA-LYTASK---I 676
              +   G Y EAI D+  A+ +   S   +VL+   +     Y++    L TA +   +
Sbjct: 275 GIAFDKAGRYDEAIADFSEAIRMAPQSARPYVLRARTYRHARQYEQAFEDLATAQRLDPV 334

Query: 677 NSEFCW-----FDIDGDIDPLFKEYW-CKRLHPKNVCEKVYR 712
           N +  W     ++  G+      +Y    R+HP  V   +YR
Sbjct: 335 NLDVYWDRAQLWEQAGNFAEAVDDYTRIIRIHPLEVDAWMYR 376



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 23/212 (10%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G   +A++     L  EPN   ++ +RGI   +  D++AA++D S  + +D ++  A   
Sbjct: 79  GRFADAVRGYDAVLSIEPNRFALV-DRGIAKQQLADYDAAIDDYSRAIGIDPDDAIALMN 137

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLD---------RNFLEAWGHLTQFYQDLAN--SEKAL 571
            G A     +++ A     +++QL+         R F  A+ +  Q+   LA+  S +A+
Sbjct: 138 RGYARLHKEQFELAIADFTRSVQLNPRLSVTYTGRAF--AYRNTKQYVAALADYDSAEAI 195

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           E L     ++         RG++L  L +  +AI+  +  L  DP+N   L  RA  +  
Sbjct: 196 EPLPPNDQVE---------RGIVLAELHRFSEAIERYNIVLAQDPNNYLALIYRAFAFEK 246

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
             +   AI+DY  AL +  D      ++ +AF
Sbjct: 247 QNQVDLAIRDYTTALAVSSDRELTHRMRGIAF 278


>gi|86605310|ref|YP_474073.1| hypothetical protein CYA_0594 [Synechococcus sp. JA-3-3Ab]
 gi|86553852|gb|ABC98810.1| TPR repeat protein [Synechococcus sp. JA-3-3Ab]
          Length = 396

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 116/255 (45%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+  +A++ +D+ L+  P +PEA   RG+        + A++ +  A+Q  P   EA   
Sbjct: 91  GQAQAALASYDRALQLKPDFPEAWNNRGSLLDDLGRHQEALASYERALQLRPDFFEARFN 150

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      LG   EA++   + L F P+S +  H  G+     + +  AV      + ++ 
Sbjct: 151 QANTLRQLGRYQEALRAYEQVLTFRPDSGEAWHLHGLTLASLERWQEAVNSYDKALAINS 210

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +   +   GLAL  +  Y +A  ++ +A+QL       W      +  L N  +AL   
Sbjct: 211 SDPRVWQSRGLALVHLERYAEALASYERALQLGLESASLWAGHALAHHRLGNWMEALNSY 270

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L  D R S+ +  RGL+L  L  +  AI+     L +DP + E  Y +A C    G+
Sbjct: 271 DRALQQDPRRSQIWVQRGLVLMDLNLYGLAIQSFDRALQMDPDDAEAHYAKACCCAWEGQ 330

Query: 635 YREAIKDYDAALDLE 649
             +A++  + AL L+
Sbjct: 331 VPQALQALEQALRLQ 345



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 18/233 (7%)

Query: 451 AWKRRGQARAA------------------LGESVEAIQDLSKALEFEPNSADILHERGIV 492
           AW+ R Q RAA                    E    +Q   +A+   P      + R   
Sbjct: 27  AWRLRRQQRAAPPDSTTVLPATAIDLSALTAEQAAQLQPFEQAVGDRPRDPIAWYNRATT 86

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             +     AA+      ++L  +   A+   G  L  +G +++A  ++ +A+QL  +F E
Sbjct: 87  LDQMGQAQAALASYDRALQLKPDFPEAWNNRGSLLDDLGRHQEALASYERALQLRPDFFE 146

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           A  +     + L   ++AL   +QVL       +A+HL GL L  L + ++A+      L
Sbjct: 147 ARFNQANTLRQLGRYQEALRAYEQVLTFRPDSGEAWHLHGLTLASLERWQEAVNSYDKAL 206

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            I+ S+      R      +  Y EA+  Y+ AL L L+S   +    LA ++
Sbjct: 207 AINSSDPRVWQSRGLALVHLERYAEALASYERALQLGLESASLWAGHALAHHR 259



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG---- 129
           NRA    Q+   +  +   D+ALQL P   +A+  +G     LGR +EAL+ +E+     
Sbjct: 82  NRATTLDQMGQAQAALASYDRALQLKPDFPEAWNNRGSLLDDLGRHQEALASYERALQLR 141

Query: 130 ---YEHALHQSADLKQFLELEELLTAAKQ 155
              +E   +Q+  L+Q    +E L A +Q
Sbjct: 142 PDFFEARFNQANTLRQLGRYQEALRAYEQ 170


>gi|42527528|ref|NP_972626.1| TPR [Treponema denticola ATCC 35405]
 gi|449111465|ref|ZP_21748062.1| hypothetical protein HMPREF9735_01111 [Treponema denticola ATCC
           33521]
 gi|449113718|ref|ZP_21750202.1| hypothetical protein HMPREF9721_00720 [Treponema denticola ATCC
           35404]
 gi|41818113|gb|AAS12537.1| TPR domain protein [Treponema denticola ATCC 35405]
 gi|448958128|gb|EMB38865.1| hypothetical protein HMPREF9721_00720 [Treponema denticola ATCC
           35404]
 gi|448958492|gb|EMB39223.1| hypothetical protein HMPREF9735_01111 [Treponema denticola ATCC
           33521]
          Length = 369

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 8/272 (2%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI   ++ LK +P Y E+++ RG       +   AI DF+  I+  P+   A+  R    
Sbjct: 74  AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G+  +A+ D++ A++ +P  +     RG + ++ KD++ A+ + +  +KL+  +  A
Sbjct: 134 LEFGDFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   GL   +I +Y  A   + KA++L     + + H+      L   + A+    + + 
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I+   ++AY  RG +   L  +  +IKDL   + +  SN    Y +A   ++  E  EAI
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAI 313

Query: 640 KDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
              +  ++L  D  +        FYQ +  +Y
Sbjct: 314 DCLEEGINLFPDYYD--------FYQVKAKIY 337



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 14/289 (4%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           I Q+N  KY   I       ++DP   +    RG   +     + AI D   +++ NP+ 
Sbjct: 36  IYQMNLSKYERQI-------EKDPNNYKLYYVRGYYYSLSGYYDLAIHDINRSLKINPNY 88

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E+   RG    A+ +  EAI D S+ +E  PN     + R     +F DF  A+ D+++
Sbjct: 89  EESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALCDINS 148

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            +KLD ++   +   G     + +Y  A   + +A++L+    +A+     FY+ + +  
Sbjct: 149 AIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYN 208

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            AL    + L +  R +  Y   GL  + L ++  AI   +  + I+ ++ E    R S 
Sbjct: 209 SALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSI 268

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN 677
           Y  +  Y  +IKD D A++L   S E      + FY K +ALY+ +++N
Sbjct: 269 YFILKNYDNSIKDLDMAINLG-GSNE------VVFYNKAVALYSKNELN 310



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 3/265 (1%)

Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           I++S  I+ ++    L RG+      KY  AI  F ++++  P  P A   R +      
Sbjct: 78  INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + E A+ D   AI+ +P     +K RG+    L +   AI + ++AL+  P  +D    R
Sbjct: 138 DFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+     KD+N+A+ D    +KL   +   Y ++GL+  ++ EY  A  A  K I+++  
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             EA+      Y  L N + +++ L   + +       ++ + + L+   +  +AI  L 
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317

Query: 610 SGLGIDPSNIECLYLRASCYHAIGE 634
            G+ + P   +   ++A  Y ++ E
Sbjct: 318 EGINLFPDYYDFYQVKAKIYRSLSE 342


>gi|423066143|ref|ZP_17054933.1| protein prenyltransferase alpha subunit [Arthrospira platensis C1]
 gi|406712185|gb|EKD07374.1| protein prenyltransferase alpha subunit [Arthrospira platensis C1]
          Length = 843

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 97/199 (48%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y  A+S FDQ LK  P + +A   RG       E E AIS + +A++      EAW  
Sbjct: 5   GEYEQALSSFDQALKYKPDFHDAWNNRGNVLYDLGEYEQAISSYDQALKYKQDYHEAWYN 64

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG A   LGE  +AI    +AL+++P+  +    RG       ++  A+      +K   
Sbjct: 65  RGNALYNLGEYEQAISSFDQALKYKPDLHEAWLNRGNALSDLGEYEQAISSFDQALKYKP 124

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A++  G ALS +GEY++A  ++ +A +   +F  AW +     +DL   E+A+   
Sbjct: 125 DFHGAWSNRGGALSDLGEYEQAISSYDQARKYKPDFHGAWYNRGNALKDLGEYEQAISSY 184

Query: 575 QQVLYIDKRFSKAYHLRGL 593
            Q L     F +A+  RG+
Sbjct: 185 DQALKYKPDFHEAWANRGI 203



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 84/170 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG    + G+Y  AIS +DQ LK    Y EA   RG A     E E AIS F +A++  
Sbjct: 30  NRGNVLYDLGEYEQAISSYDQALKYKQDYHEAWYNRGNALYNLGEYEQAISSFDQALKYK 89

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  RG A + LGE  +AI    +AL+++P+       RG       ++  A+  
Sbjct: 90  PDLHEAWLNRGNALSDLGEYEQAISSFDQALKYKPDFHGAWSNRGGALSDLGEYEQAISS 149

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
                K   +   A+   G AL  +GEY++A  ++ +A++   +F EAW 
Sbjct: 150 YDQARKYKPDFHGAWYNRGNALKDLGEYEQAISSYDQALKYKPDFHEAWA 199



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 95/201 (47%)

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           LGE  +A+    +AL+++P+  D  + RG V +   ++  A+      +K  ++   A+ 
Sbjct: 4   LGEYEQALSSFDQALKYKPDFHDAWNNRGNVLYDLGEYEQAISSYDQALKYKQDYHEAWY 63

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G AL ++GEY++A  +  +A++   +  EAW +      DL   E+A+    Q L   
Sbjct: 64  NRGNALYNLGEYEQAISSFDQALKYKPDLHEAWLNRGNALSDLGEYEQAISSFDQALKYK 123

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
             F  A+  RG  L  LG++++AI          P      Y R +    +GEY +AI  
Sbjct: 124 PDFHGAWSNRGGALSDLGEYEQAISSYDQARKYKPDFHGAWYNRGNALKDLGEYEQAISS 183

Query: 642 YDAALDLELDSMEKFVLQCLA 662
           YD AL  + D  E +  + +A
Sbjct: 184 YDQALKYKPDFHEAWANRGIA 204



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/107 (39%), Positives = 57/107 (53%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG A  + G+Y  AIS FDQ LK  P +  A   RG A +   E E AIS + +A + 
Sbjct: 97  LNRGNALSDLGEYEQAISSFDQALKYKPDFHGAWSNRGGALSDLGEYEQAISSYDQARKY 156

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
            P    AW  RG A   LGE  +AI    +AL+++P+  +    RGI
Sbjct: 157 KPDFHGAWYNRGNALKDLGEYEQAISSYDQALKYKPDFHEAWANRGI 203



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
           +  +GEY++A  +  +A++   +F +AW +      DL   E+A+    Q L   + + +
Sbjct: 1   MKDLGEYEQALSSFDQALKYKPDFHDAWNNRGNVLYDLGEYEQAISSYDQALKYKQDYHE 60

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           A++ RG  L+ LG++++AI      L   P   E    R +    +GEY +AI  +D AL
Sbjct: 61  AWYNRGNALYNLGEYEQAISSFDQALKYKPDLHEAWLNRGNALSDLGEYEQAISSFDQAL 120

Query: 647 DLELD-----SMEKFVLQCLAFYQKEIALY-TASKINSEF--CWFD 684
             + D     S     L  L  Y++ I+ Y  A K   +F   W++
Sbjct: 121 KYKPDFHGAWSNRGGALSDLGEYEQAISSYDQARKYKPDFHGAWYN 166


>gi|411119878|ref|ZP_11392254.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410710034|gb|EKQ67545.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 272

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 103/212 (48%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q   E AI+ + + + + P   E W  RG A   LG+  EA+ +  +AL+     A   H
Sbjct: 20  QGVYEGAIAQYDQLLANQPDLYEVWTYRGYALEQLGQLREALANFEQALKVNSEFALAWH 79

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +GIV  K  D++ A+  L   VKL  ++  A+   G AL  +  +++A  +  + I+L 
Sbjct: 80  GKGIVFAKLSDYDEALTCLDKTVKLAPKDPKAWYNRGNALIHLQRFEEALTSFNRTIELT 139

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            +  +AW H ++   +L     AL  L++ L I      A+  RG +L  LG ++ AI  
Sbjct: 140 PDDYKAWYHRSKTLTNLGYLYAALASLEKALSIKPDCYYAWSYRGTVLKKLGSYEDAIAS 199

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
               L I P++ +  Y +A CY   G  ++A+
Sbjct: 200 FDHSLRIKPNHSDAWYNKARCYALQGNIKQAL 231



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 88/201 (43%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+   A++ F+Q LK +  +  A  G+G   A   + + A++   + ++  P
Sbjct: 47  RGYALEQLGQLREALANFEQALKVNSEFALAWHGKGIVFAKLSDYDEALTCLDKTVKLAP 106

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG A   L    EA+   ++ +E  P+     + R           AA+  L
Sbjct: 107 KDPKAWYNRGNALIHLQRFEEALTSFNRTIELTPDDYKAWYHRSKTLTNLGYLYAALASL 166

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + +  +   A++Y G  L  +G Y+ A  +   ++++  N  +AW +  + Y    N
Sbjct: 167 EKALSIKPDCYYAWSYRGTVLKKLGSYEDAIASFDHSLRIKPNHSDAWYNKARCYALQGN 226

Query: 567 SEKALECLQQVLYIDKRFSKA 587
            ++AL  L + + ++     A
Sbjct: 227 IKQALCYLHRAIKLNPTLYTA 247



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 8/173 (4%)

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           +TY G AL  +G+ ++A     +A++++  F  AW      +  L++ ++AL CL + + 
Sbjct: 44  WTYRGYALEQLGQLREALANFEQALKVNSEFALAWHGKGIVFAKLSDYDEALTCLDKTVK 103

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           +  +  KA++ RG  L  L + ++A+   +  + + P + +  Y R+     +G    A+
Sbjct: 104 LAPKDPKAWYNRGNALIHLQRFEEALTSFNRTIELTPDDYKAWYHRSKTLTNLGYLYAAL 163

Query: 640 KDYDAALDLELD-----SMEKFVLQCLAFYQKEIALYTAS---KINSEFCWFD 684
              + AL ++ D     S    VL+ L  Y+  IA +  S   K N    W++
Sbjct: 164 ASLEKALSIKPDCYYAWSYRGTVLKKLGSYEDAIASFDHSLRIKPNHSDAWYN 216


>gi|425468819|ref|ZP_18847804.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9701]
 gi|389884522|emb|CCI35187.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9701]
          Length = 707

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 130/263 (49%), Gaps = 1/263 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
           +Y  A++ + + LK +P Y EAL G+  A    +    A++ + +AIQ NP SA +AW  
Sbjct: 347 RYTDALNSYGKALKINPDYLEALQGQADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG+A   LG++ EA++   + L   P ++     +  +  + + ++AA + L   +   K
Sbjct: 407 RGKALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQK 466

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +   +   G +L ++ +Y+ A +A+ +A+ ++ +    W         L     ALE  
Sbjct: 467 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINDALESY 526

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            +    + +FS+A++ +G++L  LG++ +A++  +     + +  +    + +  H +  
Sbjct: 527 SKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFNQATKANSNYYQAWLNQGALLHQLER 586

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
           ++EAI  Y+ A  +     E F+
Sbjct: 587 FQEAITSYEKARRISSQKAEVFI 609



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 125/263 (47%), Gaps = 7/263 (2%)

Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y+ A++ +++ ++ +P    +A +GRG A     + + A+  F   +  NP+A +AW+ 
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGKALDKLGKNQEALESFERVLSLNPAASQAWQG 440

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      L +   A + L K L F+ N A I +++G      +D+  AV+     + ++ 
Sbjct: 441 KADIYLELQQYSAAQKALEKLLTFQKNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 500

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
           +N   +   G +L  + +   A E++ KA Q +  F +A  H +Q    Q L  + +ALE
Sbjct: 501 DNALIWYQKGNSLYQLNKINDALESYSKAGQFNPQFSQA--HYSQGIILQKLGRNSEALE 558

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY-LRASCYHA 631
              Q    +  + +A+  +G LLH L + ++AI        I     E    +  +CY  
Sbjct: 559 AFNQATKANSNYYQAWLNQGALLHQLERFQEAITSYEKARRISSQKAEVFIGIGNACYR- 617

Query: 632 IGEYREAIKDYDAALDLELDSME 654
           +G+  +AI  Y  A+  + D+ E
Sbjct: 618 LGDNSQAINAYQQAIQRQKDNPE 640



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 8/210 (3%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +++G   ++ K +  A+      +K++ +   A      AL ++  Y +A   + KAIQ+
Sbjct: 336 YQQGQTFYQLKRYTDALNSYGKALKINPDYLEALQGQADALLALKRYSEALNTYEKAIQI 395

Query: 547 DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           + +   +AW    +    L  +++ALE  ++VL ++   S+A+  +  +   L Q+  A 
Sbjct: 396 NPDSAWQAWLGRGKALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQ 455

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           K L   L    ++ +  Y +      + +Y  A+K YD AL +E D+        L +YQ
Sbjct: 456 KALEKLLTFQKNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDN-------ALIWYQ 508

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           K  +LY  +KIN     +   G  +P F +
Sbjct: 509 KGNSLYQLNKINDALESYSKAGQFNPQFSQ 538



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/196 (20%), Positives = 90/196 (45%), Gaps = 1/196 (0%)

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           ++ ++GQ    L    +A+    KAL+  P+  + L  +       K ++ A+      +
Sbjct: 334 SYYQQGQTFYQLKRYTDALNSYGKALKINPDYLEALQGQADALLALKRYSEALNTYEKAI 393

Query: 511 KLDKENK-SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           +++ ++   A+   G AL  +G+ ++A E+  + + L+    +AW      Y +L     
Sbjct: 394 QINPDSAWQAWLGRGKALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSA 453

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A + L+++L   K  +K ++ +G  L  L  ++ A+K     L I+  N    Y + +  
Sbjct: 454 AQKALEKLLTFQKNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSL 513

Query: 630 HAIGEYREAIKDYDAA 645
           + + +  +A++ Y  A
Sbjct: 514 YQLNKINDALESYSKA 529



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 34/262 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A    GK   A+  F+++L  +P   +A  G+       ++  AA     + +  
Sbjct: 405 LGRGKALDKLGKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 464

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             +  + W ++G +   L +   A++   +AL  E ++A I +++G   ++    N A+E
Sbjct: 465 QKNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINDALE 524

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
             S   + + +   A+   G+ L  +G   +A EA  +A + + N+ +AW         L
Sbjct: 525 SYSKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFNQATKANSNYYQAWLNQGALLHQL 584

Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
            +F + + + EKA                           +   QQ +   K   + +  
Sbjct: 585 ERFQEAITSYEKARRISSQKAEVFIGIGNACYRLGDNSQAINAYQQAIQRQKDNPETWKS 644

Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
            G     LGQ+++AI+     L
Sbjct: 645 LGNSWFKLGQYERAIQAYQESL 666



 Score = 40.0 bits (92), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 54/116 (46%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+  F +A ++N +  +AW  +G     L    EAI    KA       A++    G   
Sbjct: 556 ALEAFNQATKANSNYYQAWLNQGALLHQLERFQEAITSYEKARRISSQKAEVFIGIGNAC 615

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           ++  D + A+      ++  K+N   +  LG +   +G+Y++A +A+ ++++   N
Sbjct: 616 YRLGDNSQAINAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 671


>gi|449116295|ref|ZP_21752746.1| hypothetical protein HMPREF9726_00731 [Treponema denticola H-22]
 gi|448954182|gb|EMB34965.1| hypothetical protein HMPREF9726_00731 [Treponema denticola H-22]
          Length = 369

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 126/272 (46%), Gaps = 8/272 (2%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI   ++ LK +P Y E+++ RG       +   AI DF+  I+  P+   A+  R    
Sbjct: 74  AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G+  +A+ D++ A++ +P  +     RG + ++ KD++ A+ + +  +KL+  +  A
Sbjct: 134 LEFGDFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   GL   +I +Y  A   + KA++L     + + H+      L   + A+    + + 
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I+   ++AY  RG +   L  +  +IKDL   + +  SN    Y +A   ++  E  EAI
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAI 313

Query: 640 KDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
              +  ++L  D  +        FYQ +  +Y
Sbjct: 314 DCLEEGINLFPDYYD--------FYQVKAKIY 337



 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 14/289 (4%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           I Q+N  KY   I       ++DP   +    RG   +     + AI D   +++ NP+ 
Sbjct: 36  IYQMNLSKYERQI-------EKDPNNYKLYYERGYYYSLSGYYDLAIHDINRSLKINPNY 88

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E+   RG    A+ +  EAI D S+ +E  PN     + R     +F DF  A+ D+++
Sbjct: 89  EESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKALCDINS 148

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            +KLD ++   +   G     + +Y  A   + +A++L+    +A+     FY+ + +  
Sbjct: 149 AIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYN 208

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            AL    + L +  R +  Y   GL  + L ++  AI   +  + I+ ++ E    R S 
Sbjct: 209 SALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSI 268

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN 677
           Y  +  Y  +IKD D A++L   S E      + FY K +ALY+ +++N
Sbjct: 269 YFILKNYDNSIKDLDMAINLG-GSNE------VVFYNKAVALYSKNELN 310



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 3/265 (1%)

Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           I++S  I+ ++    L RG+      KY  AI  F ++++  P  P A   R +      
Sbjct: 78  INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + E A+ D   AI+ +P     +K RG+    L +   AI + ++AL+  P  +D    R
Sbjct: 138 DFEKALCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+     KD+N+A+ D    +KL   +   Y ++GL+  ++ EY  A  A  K I+++  
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             EA+      Y  L N + +++ L   + +       ++ + + L+   +  +AI  L 
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317

Query: 610 SGLGIDPSNIECLYLRASCYHAIGE 634
            G+ + P   +   ++A  Y ++ E
Sbjct: 318 EGINLFPDYYDFYQVKAKIYRSLSE 342


>gi|17988679|ref|NP_541312.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|17984487|gb|AAL53576.1| tetratricopeptide repeat family protein [Brucella melitensis bv. 1
           str. 16M]
          Length = 255

 Score = 89.7 bits (221), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 26  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 85

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G        Y++A                  
Sbjct: 86  YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------NVYRQA------------------ 121

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           GHL Q          AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 122 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 171

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 172 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 220



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 89/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 46  RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 105

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+          H RG++         A+ED 
Sbjct: 106 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 165

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 166 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 225

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 226 KAKAANSYARAVQLDPKYKPA 246



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A++DF +AI   
Sbjct: 79  NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALR 138

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      D++ A +D
Sbjct: 139 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDD 198

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ +A+QLD  +  A
Sbjct: 199 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPA 246



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 26  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 85

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ D +  + L   +  AY
Sbjct: 86  YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAY 145

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 146 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 205

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 206 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 241


>gi|148379945|ref|YP_001254486.1| hypothetical protein CBO1983 [Clostridium botulinum A str. ATCC
           3502]
 gi|153934053|ref|YP_001384243.1| hypothetical protein CLB_1923 [Clostridium botulinum A str. ATCC
           19397]
 gi|153934872|ref|YP_001387783.1| hypothetical protein CLC_1929 [Clostridium botulinum A str. Hall]
 gi|148289429|emb|CAL83526.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152930097|gb|ABS35597.1| tetratricopeptide repeat family protein [Clostridium botulinum A
           str. ATCC 19397]
 gi|152930786|gb|ABS36285.1| tetratricopeptide repeat family protein [Clostridium botulinum A
           str. Hall]
          Length = 251

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 34/223 (15%)

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +   ++  I  +T +I+  PS  +A+  R +    L E  ++I+D +K LE  P   D  
Sbjct: 34  YSSNIKDKIKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYNKILELNPKDKDCY 93

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + R IV +  K+++ +++DL   V +DK  K+ Y   G+    I +YK+A     KAI  
Sbjct: 94  NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHE 153

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           D                                   R S+AY  R L  + L ++  +IK
Sbjct: 154 DS----------------------------------RDSEAYENRALAYYNLKKYSPSIK 179

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           D ++ L + P N      R + Y+ I  Y  AI DY  ALD +
Sbjct: 180 DYTNALKLTPDNKNIYLNRGTVYYKIKNYENAISDYMKALDFK 222



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 61/135 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I       Y  ++   D ++  D  Y      RG       + + A  +FT+AI  +
Sbjct: 95  NRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHED 154

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EA++ R  A   L +   +I+D + AL+  P++ +I   RG V +K K++  A+ D
Sbjct: 155 SRDSEAYENRALAYYNLKKYSPSIKDYTNALKLTPDNKNIYLNRGTVYYKIKNYENAISD 214

Query: 506 LSACVKLDKENKSAY 520
               +   +++ S Y
Sbjct: 215 YMKALDFKEKDPSFY 229



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 70/136 (51%)

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           + EY K+ E + K ++L+    + + +    Y  + N +K+L+ L  ++ +DK +   Y 
Sbjct: 69  LEEYNKSIEDYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYF 128

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            RG++  G+  +K+A  + +  +  D  + E    RA  Y+ + +Y  +IKDY  AL L 
Sbjct: 129 NRGMVFLGIEDYKRAAIEFTKAIHEDSRDSEAYENRALAYYNLKKYSPSIKDYTNALKLT 188

Query: 650 LDSMEKFVLQCLAFYQ 665
            D+   ++ +   +Y+
Sbjct: 189 PDNKNIYLNRGTVYYK 204



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 35/189 (18%), Positives = 77/189 (40%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I  +   +K  P + +A   R        E   +I D+ + ++ NP   + +  R     
Sbjct: 42  IKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYNKILELNPKDKDCYNNRAIVYY 101

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +    +++QDL   +  + +  +I   RG+V    +D+  A  + +  +  D  +  AY
Sbjct: 102 LIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDSRDSEAY 161

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
               LA  ++ +Y  + + +  A++L  +    + +    Y  + N E A+    + L  
Sbjct: 162 ENRALAYYNLKKYSPSIKDYTNALKLTPDNKNIYLNRGTVYYKIKNYENAISDYMKALDF 221

Query: 581 DKRFSKAYH 589
            ++    YH
Sbjct: 222 KEKDPSFYH 230



 Score = 43.1 bits (100), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 26/150 (17%), Positives = 63/150 (42%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  +++IL+ +P   +    R       +  + ++ D    +  +      +  RG
Sbjct: 72  YNKSIEDYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRG 131

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                + +   A  + +KA+  +   ++    R +  +  K ++ +++D +  +KL  +N
Sbjct: 132 MVFLGIEDYKRAAIEFTKAIHEDSRDSEAYENRALAYYNLKKYSPSIKDYTNALKLTPDN 191

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           K+ Y   G     I  Y+ A   ++KA+  
Sbjct: 192 KNIYLNRGTVYYKIKNYENAISDYMKALDF 221



 Score = 42.0 bits (97), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 42/104 (40%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+  +    Y  A   F + + ED    EA   R  A    ++   +I D+T A++ 
Sbjct: 128 FNRGMVFLGIEDYKRAAIEFTKAIHEDSRDSEAYENRALAYYNLKKYSPSIKDYTNALKL 187

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            P     +  RG     +     AI D  KAL+F+       H+
Sbjct: 188 TPDNKNIYLNRGTVYYKIKNYENAISDYMKALDFKEKDPSFYHK 231


>gi|428207485|ref|YP_007091838.1| hypothetical protein Chro_2486 [Chroococcidiopsis thermalis PCC
           7203]
 gi|428009406|gb|AFY87969.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Chroococcidiopsis thermalis PCC 7203]
          Length = 424

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 133/304 (43%), Gaps = 47/304 (15%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRE-LEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           AIS +D  +K DP + +A I RG     Q++  EAAI+DFT+AI+ + +  +A   R  A
Sbjct: 60  AISDYDLAIKLDPQHYKAYICRGITYLEQKQNAEAAIADFTKAIEVDSNKIQAHVNRANA 119

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS----------- 507
            + L +   A++DLS A+   P+ +D    RG +  +  D++AAV D S           
Sbjct: 120 YSYLNDYSAALKDLSTAIHIAPDRSDSYLNRGYIWVRTGDYHAAVVDFSQAIVLNPDFAI 179

Query: 508 -----------------------ACVKLDKENK----SAYTYLGLALSSIGEYKKAEEAH 540
                                  A + LDK N     +AY Y G  L S+GE   A   +
Sbjct: 180 AYLNRGNAYKKLAQTQAALNDYAAVIHLDKTNSKNVVTAYVYRGEILESLGELAAAFSEY 239

Query: 541 LKAIQL--DRNFLEA--WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
            +AI+L  D +FL+      L QF Q       ALE     + +D++    Y  R  +  
Sbjct: 240 DRAIELCPDEHFLQHKRGALLCQFGQ----LSSALEHYNIAISLDRKCMYCYADRAWVRK 295

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            LG    AI D S  +  +P N+     R   Y    + + A  DY  A+ LE D    +
Sbjct: 296 NLGDISGAIADWSQVIEQNPENVLAYIERGELYFQSHQLKAAKADYTKAIILEPDEPHFY 355

Query: 657 VLQC 660
           V++ 
Sbjct: 356 VVRA 359



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 5/271 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+  + EG    A+  F++ LK DP   E +  RG   +  +  + AISD+  AI+ +P 
Sbjct: 14  GLHALFEGNVKIALLYFNKALKLDPNLVEVIYNRGNLYSILKMSDKAISDYDLAIKLDPQ 73

Query: 448 AGEAWKRRGQARAALGESVE-AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
             +A+  RG       ++ E AI D +KA+E + N       R        D++AA++DL
Sbjct: 74  HYKAYICRGITYLEQKQNAEAAIADFTKAIEVDSNKIQAHVNRANAYSYLNDYSAALKDL 133

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + +  +   +Y   G      G+Y  A     +AI L+ +F  A+ +    Y+ LA 
Sbjct: 134 STAIHIAPDRSDSYLNRGYIWVRTGDYHAAVVDFSQAIVLNPDFAIAYLNRGNAYKKLAQ 193

Query: 567 SEKALECLQQVLYIDKRFSK----AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           ++ AL     V+++DK  SK    AY  RG +L  LG+   A  +    + + P      
Sbjct: 194 TQAALNDYAAVIHLDKTNSKNVVTAYVYRGEILESLGELAAAFSEYDRAIELCPDEHFLQ 253

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSM 653
           + R +     G+   A++ Y+ A+ L+   M
Sbjct: 254 HKRGALLCQFGQLSSALEHYNIAISLDRKCM 284



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 59/119 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R   + N G  + AI+ + Q+++++P    A I RG       +L+AA +D+T+AI   P
Sbjct: 290 RAWVRKNLGDISGAIADWSQVIEQNPENVLAYIERGELYFQSHQLKAAKADYTKAIILEP 349

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                +  R +   +L   V A++D  +A+E  P+ A     R +V  +FK    AV +
Sbjct: 350 DEPHFYVVRAEVNLSLNYLVAALKDCDRAIEIAPDFARANLIRTLVKLRFKKMGTAVSN 408



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 1/117 (0%)

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL-LLHGLGQ 600
           KA++LD N +E   +    Y  L  S+KA+      + +D +  KAY  RG+  L     
Sbjct: 32  KALKLDPNLVEVIYNRGNLYSILKMSDKAISDYDLAIKLDPQHYKAYICRGITYLEQKQN 91

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
            + AI D +  + +D + I+    RA+ Y  + +Y  A+KD   A+ +  D  + ++
Sbjct: 92  AEAAIADFTKAIEVDSNKIQAHVNRANAYSYLNDYSAALKDLSTAIHIAPDRSDSYL 148


>gi|333986764|ref|YP_004519371.1| hypothetical protein MSWAN_0532 [Methanobacterium sp. SWAN-1]
 gi|333824908|gb|AEG17570.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 529

 Score = 89.7 bits (221), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 132/271 (48%), Gaps = 5/271 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKE-----DPMYPEALIGRGTARAFQRELEAAISDFTE 440
            +G+     GKY  AI  +++ LK      D ++ + L  +G       + +AAI  F +
Sbjct: 240 GKGLVSQKLGKYEEAIDYYNKALKLGLKNFDNLHVDILYRKGIILTELGKYKAAIGPFDK 299

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A++ +P+  + W  RG     L +S EA+    KAL+ +P +      + +         
Sbjct: 300 ALKIDPNFVDVWTARGMVSLMLNKSEEALGYYDKALKVDPQNFGAFMGKYMALMDLDKHQ 359

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            ++E L   ++++ +  S +   G+ L+ +G Y++A     KA++LD+    AW    + 
Sbjct: 360 ESLEYLDKVLEIESQQASLWASRGILLNQLGRYEEAIICLNKALKLDQKEPRAWKTKGKS 419

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
              L   E+AL+ L++ L +D + S A+  +GL  + L + K+++      L ++P N +
Sbjct: 420 LVRLKRPEEALKSLEEALKLDPKNSDAWFTKGLAFNQLAKFKESLNCFEKSLNLNPDNAD 479

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELD 651
             Y +      + +  +A+K YD AL+L++D
Sbjct: 480 AWYGKGLSLEELEKPEKALKSYDKALELKID 510



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 131/275 (47%), Gaps = 7/275 (2%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           + +A+   ++ L+ DP Y  A   +G A     + E  +     AI+ +P  G  W  +G
Sbjct: 183 FNNALEFANEALELDPNYALAWHIKGGALIGMAKPEEGLKCLDNAIELDPELGLPWYGKG 242

Query: 457 QARAALGESVEAIQDLSKALE-----FEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
                LG+  EAI   +KAL+     F+    DIL+ +GI+  +   + AA+      +K
Sbjct: 243 LVSQKLGKYEEAIDYYNKALKLGLKNFDNLHVDILYRKGIILTELGKYKAAIGPFDKALK 302

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDLANSEKA 570
           +D      +T  G+    + + ++A   + KA+++D +NF    G       DL   +++
Sbjct: 303 IDPNFVDVWTARGMVSLMLNKSEEALGYYDKALKVDPQNFGAFMGKYMAL-MDLDKHQES 361

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           LE L +VL I+ + +  +  RG+LL+ LG++++AI  L+  L +D         +     
Sbjct: 362 LEYLDKVLEIESQQASLWASRGILLNQLGRYEEAIICLNKALKLDQKEPRAWKTKGKSLV 421

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            +    EA+K  + AL L+  + + +  + LAF Q
Sbjct: 422 RLKRPEEALKSLEEALKLDPKNSDAWFTKGLAFNQ 456



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 124/271 (45%), Gaps = 5/271 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G A +   K    +   D  ++ DP       G+G       + E AI  + +A++   
Sbjct: 207 KGGALIGMAKPEEGLKCLDNAIELDPELGLPWYGKGLVSQKLGKYEEAIDYYNKALKLGL 266

Query: 447 SAGE-----AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
              +        R+G     LG+   AI    KAL+ +PN  D+   RG+V+        
Sbjct: 267 KNFDNLHVDILYRKGIILTELGKYKAAIGPFDKALKIDPNFVDVWTARGMVSLMLNKSEE 326

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+      +K+D +N  A+    +AL  + +++++ E   K ++++      W       
Sbjct: 327 ALGYYDKALKVDPQNFGAFMGKYMALMDLDKHQESLEYLDKVLEIESQQASLWASRGILL 386

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             L   E+A+ CL + L +D++  +A+  +G  L  L + ++A+K L   L +DP N + 
Sbjct: 387 NQLGRYEEAIICLNKALKLDQKEPRAWKTKGKSLVRLKRPEEALKSLEEALKLDPKNSDA 446

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDS 652
            + +   ++ + +++E++  ++ +L+L  D+
Sbjct: 447 WFTKGLAFNQLAKFKESLNCFEKSLNLNPDN 477



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 2/140 (1%)

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           YQ L     ALE   + L +D  ++ A+H++G  L G+ + ++ +K L + + +DP    
Sbjct: 177 YQSLTGFNNALEFANEALELDPNYALAWHIKGGALIGMAKPEEGLKCLDNAIELDPELGL 236

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEF 680
             Y +      +G+Y EAI  Y+ AL L L + +   +  L  Y+K I L    K  +  
Sbjct: 237 PWYGKGLVSQKLGKYEEAIDYYNKALKLGLKNFDNLHVDIL--YRKGIILTELGKYKAAI 294

Query: 681 CWFDIDGDIDPLFKEYWCKR 700
             FD    IDP F + W  R
Sbjct: 295 GPFDKALKIDPNFVDVWTAR 314



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 92/207 (44%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VD   +RG+  +   K   A+  +D+ LK DP    A +G+  A     + + ++    +
Sbjct: 308 VDVWTARGMVSLMLNKSEEALGYYDKALKVDPQNFGAFMGKYMALMDLDKHQESLEYLDK 367

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            ++        W  RG     LG   EAI  L+KAL+ +         +G    + K   
Sbjct: 368 VLEIESQQASLWASRGILLNQLGRYEEAIICLNKALKLDQKEPRAWKTKGKSLVRLKRPE 427

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A++ L   +KLD +N  A+   GLA + + ++K++     K++ L+ +  +AW      
Sbjct: 428 EALKSLEEALKLDPKNSDAWFTKGLAFNQLAKFKESLNCFEKSLNLNPDNADAWYGKGLS 487

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKA 587
            ++L   EKAL+   + L +   F  A
Sbjct: 488 LEELEKPEKALKSYDKALELKIDFKPA 514



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 5/126 (3%)

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           S+  +  A E   +A++LD N+  AW         +A  E+ L+CL   + +D      +
Sbjct: 179 SLTGFNNALEFANEALELDPNYALAWHIKGGALIGMAKPEEGLKCLDNAIELDPELGLPW 238

Query: 589 HLRGLLLHGLGQHKKAI----KDLSSGL-GIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           + +GL+   LG++++AI    K L  GL   D  +++ LY +      +G+Y+ AI  +D
Sbjct: 239 YGKGLVSQKLGKYEEAIDYYNKALKLGLKNFDNLHVDILYRKGIILTELGKYKAAIGPFD 298

Query: 644 AALDLE 649
            AL ++
Sbjct: 299 KALKID 304


>gi|189022474|ref|YP_001932215.1| RNA-binding region RNP-1 (RNA recognition motif) [Brucella abortus
           S19]
 gi|189021048|gb|ACD73769.1| RNA-binding region RNP-1 (RNA recognition motif) [Brucella abortus
           S19]
          Length = 283

 Score = 89.4 bits (220), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 54  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G        Y++A                  
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------NVYRQA------------------ 149

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           GHL Q          AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 150 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 199

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 200 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 248



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 89/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 74  RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+          H RG++         A+ED 
Sbjct: 134 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 193

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 194 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 253

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 254 KAKAANSYARAVQLDPKYKPA 274



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A++DF +AI   
Sbjct: 107 NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALR 166

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      D++ A +D
Sbjct: 167 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDD 226

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ +A+QLD  +  A
Sbjct: 227 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPA 274



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 54  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ D +  + L   +  AY
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAY 173

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 174 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 233

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 234 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 269


>gi|443318565|ref|ZP_21047814.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 6406]
 gi|442781830|gb|ELR91921.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 6406]
          Length = 572

 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 139/318 (43%), Gaps = 41/318 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDP-----------------MYPEALIG------- 420
           L++GIAQ  +  Y  A++ FD+ +  +P                 ++ EALI        
Sbjct: 230 LNQGIAQFQQANYREAVAAFDRAVDLNPQLALAWTYQGRVLAQGNLHTEALISYTQAVAL 289

Query: 421 -RGTARAF---------QRELEAAISDFTEAIQS------NPSAGEAWKRRGQARAALGE 464
             G+ARA           R+ E A +   +A+Q       +    EAW +  QA A  G+
Sbjct: 290 DSGSARALVGQCAALNKTRQYEDAGAACQQALQESDGDWWDLGPAEAWAQYAQALAGQGQ 349

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
             EA+   S+A+   P+ A    +RG+V +  + +  A+      ++LD      +T LG
Sbjct: 350 YEEALAATSRAVGIRPDYAAAWGDRGVVLWYLRRYGEAIAATQQSIELDDTAARPWTNLG 409

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
             L S+G++  A  A+  A+Q D N    W + +     L+  E++L    + + +D RF
Sbjct: 410 SILRSVGQHTDALAAYENALQRDANNPLIWANRSVVLWHLSRYEESLLSANRAVNLDPRF 469

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
              ++ RG  L  L ++ +A+      +G+DP+N +           +G   EA +    
Sbjct: 470 ITGWYNRGTALISLQRYDEALNAFVQVIGLDPTNADAWTGAGVALGQLGRGAEARQALAK 529

Query: 645 ALDLEL-DSMEKFVLQCL 661
           AL+L    ++ + VL  L
Sbjct: 530 ALELNPQQAIAQAVLNAL 547



 Score = 49.7 bits (117), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 53/246 (21%), Positives = 93/246 (37%), Gaps = 31/246 (12%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W+     +AA  +  EA +    A+E EP +  +    G V      +  A+      ++
Sbjct: 49  WRNLCDLQAAASQYAEAQKACEAAIELEPRNDGLWARHGGVLLAQDQYPNAIASAMQALR 108

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
            + +N  A+TY+ +A   +G  + A +A   A+++D     +WG                
Sbjct: 109 FNPQNSLAFTYICMAQYELGNLEPALDACNDALRVD----GSWG---------------- 148

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
                    ++  S A+  RGL+L G      A+   +  L ++P +   L      Y A
Sbjct: 149 ---------NQSPSLAWQYRGLILTGQTDPAAALVAYARTLLLEPEDSRTLLHECEAYLA 199

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +  YR AI    AA  L  +         LA+  + IA +  +        FD   D++P
Sbjct: 200 LENYRNAIASCQAA--LAGNGNWGPTAPALAWLNQGIAQFQQANYREAVAAFDRAVDLNP 257

Query: 692 LFKEYW 697
                W
Sbjct: 258 QLALAW 263



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 69/338 (20%), Positives = 133/338 (39%), Gaps = 21/338 (6%)

Query: 374 SKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEA 433
           ++S S++  +R   G+    +   A+A+  + + L  +P     L+    A         
Sbjct: 149 NQSPSLAWQYR---GLILTGQTDPAAALVAYARTLLLEPEDSRTLLHECEAYLALENYRN 205

Query: 434 AISDFTEAIQSNPSAGE-----AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           AI+    A+  N + G      AW  +G A+       EA+    +A++  P  A     
Sbjct: 206 AIASCQAALAGNGNWGPTAPALAWLNQGIAQFQQANYREAVAAFDRAVDLNPQLALAWTY 265

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ--- 545
           +G V  +      A+   +  V LD  +  A      AL+   +Y+ A  A  +A+Q   
Sbjct: 266 QGRVLAQGNLHTEALISYTQAVALDSGSARALVGQCAALNKTRQYEDAGAACQQALQESD 325

Query: 546 ---LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
               D    EAW    Q        E+AL    + + I   ++ A+  RG++L  L ++ 
Sbjct: 326 GDWWDLGPAEAWAQYAQALAGQGQYEEALAATSRAVGIRPDYAAAWGDRGVVLWYLRRYG 385

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           +AI      + +D +         S   ++G++ +A+  Y+ AL  + ++        L 
Sbjct: 386 EAIAATQQSIELDDTAARPWTNLGSILRSVGQHTDALAAYENALQRDANN-------PLI 438

Query: 663 FYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           +  + + L+  S+        +   ++DP F   W  R
Sbjct: 439 WANRSVVLWHLSRYEESLLSANRAVNLDPRFITGWYNR 476



 Score = 40.0 bits (92), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 97/255 (38%), Gaps = 25/255 (9%)

Query: 430 ELEAAISDFTEA-------IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
           +L+AA S + EA       I+  P     W R G    A  +   AI    +AL F P +
Sbjct: 54  DLQAAASQYAEAQKACEAAIELEPRNDGLWARHGGVLLAQDQYPNAIASAMQALRFNPQN 113

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKE--NKS---AYTYLGLALSSIGEYKKAE 537
           +       +  ++  +   A++  +  +++D    N+S   A+ Y GL L+   +   A 
Sbjct: 114 SLAFTYICMAQYELGNLEPALDACNDALRVDGSWGNQSPSLAWQYRGLILTGQTDPAAAL 173

Query: 538 EAHLKAIQLD----RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
            A+ + + L+    R  L    H  + Y  L N   A+   Q  L  +  +         
Sbjct: 174 VAYARTLLLEPEDSRTLL----HECEAYLALENYRNAIASCQAALAGNGNWGPTAPALAW 229

Query: 594 LLHGLGQ-----HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           L  G+ Q     +++A+      + ++P        +         + EA+  Y  A+ L
Sbjct: 230 LNQGIAQFQQANYREAVAAFDRAVDLNPQLALAWTYQGRVLAQGNLHTEALISYTQAVAL 289

Query: 649 ELDSMEKFVLQCLAF 663
           +  S    V QC A 
Sbjct: 290 DSGSARALVGQCAAL 304


>gi|338811928|ref|ZP_08624129.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
 gi|337276073|gb|EGO64509.1| TPR repeat-containing protein [Acetonema longum DSM 6540]
          Length = 298

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 56/216 (25%), Positives = 105/216 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            ++G+   +   Y  AI+ + Q +  +P Y +A   RG A     E + AI+D+T+ I  
Sbjct: 46  FNKGLQYDSRQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIADYTQVIAL 105

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   +AW+ RG   A  G+  +A+ D ++ +  EP +A+  + RGI      D++ A+ 
Sbjct: 106 APQNMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKGDYDTAIT 165

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  + L  +  +AY   G+A  + G+Y KA + + +AI L+     A+ +    Y   
Sbjct: 166 DYTRAIALQPKYATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVMK 225

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            + +KA+        +D  ++ AY+ + L     G+
Sbjct: 226 GDYDKAITDYSLATTLDPDYAVAYYNQALACEKAGR 261



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 34/251 (13%)

Query: 412 PMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQD 471
           P   E    +G     +++   AI+ +++AI  NP   +A+  RG A    GE   AI D
Sbjct: 39  PGAEEHWFNKGLQYDSRQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIAD 98

Query: 472 LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
            ++ +   P + D    RG V  +  D++ AV D +  + L+ +N  A+   G+A S  G
Sbjct: 99  YTQVIALAPQNMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKG 158

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           +Y  A   + +AI L                                    +++ AY+ R
Sbjct: 159 DYDTAITDYTRAIALQ----------------------------------PKYATAYYNR 184

Query: 592 GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           G+     G + KAI D S  + ++P +      RA+ Y   G+Y +AI DY  A  L+ D
Sbjct: 185 GIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVMKGDYDKAITDYSLATTLDPD 244

Query: 652 SMEKFVLQCLA 662
               +  Q LA
Sbjct: 245 YAVAYYNQALA 255



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/173 (30%), Positives = 86/173 (49%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +RG A  N G+Y +AI+ + Q++   P   +A   RG   A + + + A++D+T+ 
Sbjct: 77  DAYYNRGNAYKNSGEYDNAIADYTQVIALAPQNMDAWRSRGDVYAEKGDYDKAVTDYTQF 136

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I   P   EA   RG A +  G+   AI D ++A+  +P  A   + RGI      D++ 
Sbjct: 137 IALEPQNAEAHNNRGIAYSDKGDYDTAITDYTRAIALQPKYATAYYNRGIAYKNKGDYDK 196

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           A++D S  + L+  + SAY     A    G+Y KA   +  A  LD ++  A+
Sbjct: 197 AIDDYSQAIALNPRDASAYNNRANAYVMKGDYDKAITDYSLATTLDPDYAVAY 249



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 69/152 (45%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           ++D   SRG     +G Y  A++ + Q +  +P   EA   RG A + + + + AI+D+T
Sbjct: 109 NMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDKGDYDTAITDYT 168

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            AI   P    A+  RG A    G+  +AI D S+A+   P  A   + R        D+
Sbjct: 169 RAIALQPKYATAYYNRGIAYKNKGDYDKAIDDYSQAIALNPRDASAYNNRANAYVMKGDY 228

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
           + A+ D S    LD +   AY    LA    G
Sbjct: 229 DKAITDYSLATTLDPDYAVAYYNQALACEKAG 260



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 78/170 (45%)

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           +P + +    +G+     +D+N A+   S  + L+ +   AY   G A  + GEY  A  
Sbjct: 38  KPGAEEHWFNKGLQYDSRQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIA 97

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
            + + I L    ++AW      Y +  + +KA+    Q + ++ + ++A++ RG+     
Sbjct: 98  DYTQVIALAPQNMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDK 157

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           G +  AI D +  + + P      Y R   Y   G+Y +AI DY  A+ L
Sbjct: 158 GDYDTAITDYTRAIALQPKYATAYYNRGIAYKNKGDYDKAIDDYSQAIAL 207



 Score = 46.2 bits (108), Expect = 0.087,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 53/115 (46%)

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           E W +    Y    +  KA+    Q + ++ +++ AY+ RG      G++  AI D +  
Sbjct: 43  EHWFNKGLQYDSRQDYNKAIAAYSQAIALNPQYADAYYNRGNAYKNSGEYDNAIADYTQV 102

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
           + + P N++    R   Y   G+Y +A+ DY   + LE  + E    + +A+  K
Sbjct: 103 IALAPQNMDAWRSRGDVYAEKGDYDKAVTDYTQFIALEPQNAEAHNNRGIAYSDK 157


>gi|409992587|ref|ZP_11275768.1| hypothetical protein APPUASWS_15917 [Arthrospira platensis str.
           Paraca]
 gi|291565893|dbj|BAI88165.1| TPR domain protein [Arthrospira platensis NIES-39]
 gi|409936542|gb|EKN78025.1| hypothetical protein APPUASWS_15917 [Arthrospira platensis str.
           Paraca]
          Length = 581

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 135/323 (41%), Gaps = 41/323 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG     E +Y  AI+ +D+ L+  P   +A+  RG A         AI+ + + IQ  P
Sbjct: 226 RGEMLTREHRYVDAIASYDKALELQPASFKAIFNRGIALQKLHRYNDAIACYDQVIQLQP 285

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EAW  +G A  + G    A+  L +ALE  P S  I   RG      K++ +A+   
Sbjct: 286 NDYEAWFYKGMALKS-GWPKTALLSLDRALEINPESPAIWIGRGQTLLDLKEYKSAIASF 344

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
               +L+     A+    +AL  +  Y +A  A   A+Q+  NFLEAW       + L  
Sbjct: 345 DRATQLNSNFPEAWLGRAVALFQLRRYPEAIIACDNALQVQPNFLEAWNQRGLTLERLGR 404

Query: 567 SEKALECLQQVLYI------------------------DKRFSKAYH--LR--------- 591
            E AL+   +V+                          D+    AY   +R         
Sbjct: 405 YEDALKAYDKVIQTTVLTLELADQVGLQRGMALELLKRDEEAVMAYRKLVRQKPDNFQAW 464

Query: 592 ---GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
              G +L  LGQ+ +A+   S  + I P N +    + +    +  Y++AI  YD  + +
Sbjct: 465 VKLGQVLARLGQYVQAVDAFSEAIAIWPDNYQIWLEQGAILEKLDRYQDAIAAYDRLIKI 524

Query: 649 ELDSMEKFVLQCLAFYQKEIALY 671
           + D  E +V +  AF  ++IALY
Sbjct: 525 KPDYWEAWVRRGQAF--EQIALY 545



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 9/274 (3%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+      +Y  AI+ FD+ L  +P   EA   RG A     + EAA + +  AI+  P
Sbjct: 124 RGMTLSKLERYEEAIASFDKALTMEPNNFEAWYERGLALEASLQFEAAAASYKRAIEIKP 183

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +    W  +G A        EA+  L +A++ EP + +    RG +  +   +  A+   
Sbjct: 184 NISALWYHQGSALMNDDRYSEAVASLDRAVKLEPANYEAWFHRGEMLTREHRYVDAIASY 243

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              ++L   +  A    G+AL  +  Y  A   + + IQL  N  EAW     FY+ +A 
Sbjct: 244 DKALELQPASFKAIFNRGIALQKLHRYNDAIACYDQVIQLQPNDYEAW-----FYKGMAL 298

Query: 567 ----SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                + AL  L + L I+      +  RG  L  L ++K AI        ++ +  E  
Sbjct: 299 KSGWPKTALLSLDRALEINPESPAIWIGRGQTLLDLKEYKSAIASFDRATQLNSNFPEAW 358

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             RA     +  Y EAI   D AL ++ + +E +
Sbjct: 359 LGRAVALFQLRRYPEAIIACDNALQVQPNFLEAW 392



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 38/268 (14%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG   ++  +Y SAI+ FD+  + +  +PEA +GR  A    R    AI     A+Q 
Sbjct: 325 IGRGQTLLDLKEYKSAIASFDRATQLNSNFPEAWLGRAVALFQLRRYPEAIIACDNALQV 384

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH----ERGIVNFKFKDFN 500
            P+  EAW +RG     LG   +A++   K ++    + ++      +RG+     K   
Sbjct: 385 QPNFLEAWNQRGLTLERLGRYEDALKAYDKVIQTTVLTLELADQVGLQRGMALELLKRDE 444

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            AV      V+   +N  A+  LG  L+ +G+Y +A +A  +AI +  +  + W      
Sbjct: 445 EAVMAYRKLVRQKPDNFQAWVKLGQVLARLGQYVQAVDAFSEAIAIWPDNYQIW------ 498

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
                        L+Q               G +L  L +++ AI      + I P   E
Sbjct: 499 -------------LEQ---------------GAILEKLDRYQDAIAAYDRLIKIKPDYWE 530

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
               R   +  I  Y+EA   Y  AL+L
Sbjct: 531 AWVRRGQAFEQIALYQEAFNSYGIALEL 558



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 143/359 (39%), Gaps = 49/359 (13%)

Query: 383 FRLSRGIAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           F + +   + N+G       +Y  A+  +   +K  P    A +  G      ++ + A+
Sbjct: 45  FNIFKAFREYNQGNRLYKRERYDQALIHYQIAVKLKPDSWAAWLRLGNTLRKLKQYKKAL 104

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
             +  AI+  P     W  RG   + L    EAI    KAL  EPN+ +  +ERG+    
Sbjct: 105 GAYDRAIKLRPRNYWPWTFRGMTLSKLERYEEAIASFDKALTMEPNNFEAWYERGLALEA 164

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
              F AA       +++     + + + G AL +   Y +A  +  +A++L+    EAW 
Sbjct: 165 SLQFEAAAASYKRAIEIKPNISALWYHQGSALMNDDRYSEAVASLDRAVKLEPANYEAWF 224

Query: 556 H----LT---QFYQDLANSEKALE---------------------------CLQQVLYID 581
           H    LT   ++   +A+ +KALE                           C  QV+ + 
Sbjct: 225 HRGEMLTREHRYVDAIASYDKALELQPASFKAIFNRGIALQKLHRYNDAIACYDQVIQLQ 284

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
               +A+  +G+ L   G  K A+  L   L I+P +      R      + EY+ AI  
Sbjct: 285 PNDYEAWFYKGMALKS-GWPKTALLSLDRALEINPESPAIWIGRGQTLLDLKEYKSAIAS 343

Query: 642 YDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           +D A  L  +  E ++ + +A +Q  +  Y  + I    C  D    + P F E W +R
Sbjct: 344 FDRATQLNSNFPEAWLGRAVALFQ--LRRYPEAIIA---C--DNALQVQPNFLEAWNQR 395



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 29/56 (51%)

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
             RA    QL  +   I  CD ALQ+ P  L+A+  +G     LGR E+AL  ++K
Sbjct: 359 LGRAVALFQLRRYPEAIIACDNALQVQPNFLEAWNQRGLTLERLGRYEDALKAYDK 414


>gi|449126818|ref|ZP_21763094.1| hypothetical protein HMPREF9733_00497, partial [Treponema denticola
           SP33]
 gi|448945342|gb|EMB26215.1| hypothetical protein HMPREF9733_00497, partial [Treponema denticola
           SP33]
          Length = 258

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 116/237 (48%), Gaps = 1/237 (0%)

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
           + RG    +  E E A++DF + I+ NP    A+  +G     L +   ++  L+KA++ 
Sbjct: 1   LNRGEMYYYVNEHEKALADFDKVIELNPKEDRAYYWKGLVYEYLKQYESSLVYLNKAIQL 60

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
              +      R +V  + ++++ A  D++  +KL++ N   Y+  GL    + +Y  A  
Sbjct: 61  NDKNYKYYELRSLVYKQLREYDKAYNDVNIAIKLNQNNGILYSLRGLLNEYLNKYNDAII 120

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
            + K+I+L   F+  +  L   Y    N E  LE   + + I++ +   Y  RG L   L
Sbjct: 121 DYKKSIELMPEFIAPYKSLLSIYLQTQNYEAGLEVADKAINIEQSWI-LYSTRGYLFLML 179

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
             + +AI D +  + ++    +    R   Y A+ EY++AI+D+D A+ L+ D+++K
Sbjct: 180 QSYNEAISDSNRAIKLNSGFADSYLTRGKAYLALKEYKKAIEDFDMAIKLDPDNIDK 236


>gi|367475911|ref|ZP_09475338.1| conserved exported hypothetical protein, TPR-like motif
           [Bradyrhizobium sp. ORS 285]
 gi|365271774|emb|CCD87806.1| conserved exported hypothetical protein, TPR-like motif
           [Bradyrhizobium sp. ORS 285]
          Length = 476

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 5/210 (2%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           DP   EA   RG     QR L+ A++D+ +AI+  P   +A+  RG A    G++ +A+Q
Sbjct: 151 DPNDAEAYELRGVVYTEQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQ 210

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           D ++A+  +P+       R     K    + A+ D    ++ D +    Y   GL  +++
Sbjct: 211 DYNEAIRLDPDRPRTFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAM 270

Query: 531 GEYKKAEEAHLKAIQLD--RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            EY KA   + +AI+L    NFL   G   QF  +L +   AL      L +D  F+  Y
Sbjct: 271 KEYDKAIADYDQAIKLQPKPNFLTNRGDSYQFKGELGS---ALSDYDAALRLDPNFALTY 327

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           + R +L   +G+  KA+ D  + L +DP N
Sbjct: 328 NNRAVLFRKMGERAKALADYEAALRLDPGN 357



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 2/220 (0%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQ-ARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +  A+ D   AI  +     A++ RG   R A G++ +A  DLS A+  +PN A+    R
Sbjct: 102 MSQALKDLDRAIALDGKNARAYRLRGDFMREAGGDAGKAAADLSMAISLDPNDAEAYELR 161

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+V  + +  + A+ D    ++L  +   AY   G+A    G+ +KA + + +AI+LD +
Sbjct: 162 GVVYTEQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDPD 221

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
               + +    Y+ L   +KAL    + +  D +  + Y  RGL    + ++ KAI D  
Sbjct: 222 RPRTFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAMKEYDKAIADYD 281

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             + + P     L  R   Y   GE   A+ DYDAAL L+
Sbjct: 282 QAIKLQPKP-NFLTNRGDSYQFKGELGSALSDYDAALRLD 320



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 1/209 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+    + +   A++ +DQ ++  P Y +A   RG A   + + E A+ D+ EAI+ +P
Sbjct: 161 RGVVYTEQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQDYNEAIRLDP 220

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  R  A   LG+  +A+ D  +A+  +P   +    RG+     K+++ A+ D 
Sbjct: 221 DRPRTFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAMKEYDKAIADY 280

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +KL +   +  T  G +    GE   A   +  A++LD NF   + +    ++ +  
Sbjct: 281 DQAIKL-QPKPNFLTNRGDSYQFKGELGSALSDYDAALRLDPNFALTYNNRAVLFRKMGE 339

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLL 595
             KAL   +  L +D     A   R ++L
Sbjct: 340 RAKALADYEAALRLDPGNDNAASGRRVML 368



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 1/148 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R  A    G+   A++   + ++ DP  PE    RG   A  +E + AI+D+ +AI+  
Sbjct: 228 NRAAAYKKLGQIDKALADDHEAIRRDPKVPEYYDNRGLTYAAMKEYDKAIADYDQAIKLQ 287

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P        RG +    GE   A+ D   AL  +PN A   + R ++  K  +   A+ D
Sbjct: 288 PKP-NFLTNRGDSYQFKGELGSALSDYDAALRLDPNFALTYNNRAVLFRKMGERAKALAD 346

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEY 533
             A ++LD  N +A +   + L+ I ++
Sbjct: 347 YEAALRLDPGNDNAASGRRVMLAEIKKF 374



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 1/116 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+      +Y  AI+ +DQ +K  P  P  L  RG +  F+ EL +A+SD+  A++ +
Sbjct: 262 NRGLTYAAMKEYDKAIADYDQAIKLQPK-PNFLTNRGDSYQFKGELGSALSDYDAALRLD 320

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           P+    +  R      +GE  +A+ D   AL  +P + +    R ++  + K F A
Sbjct: 321 PNFALTYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAASGRRVMLAEIKKFGA 376



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 1/97 (1%)

Query: 569 KALECLQQVLYIDKRFSKAYHLRG-LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +AL+ L + + +D + ++AY LRG  +    G   KA  DLS  + +DP++ E   LR  
Sbjct: 104 QALKDLDRAIALDGKNARAYRLRGDFMREAGGDAGKAAADLSMAISLDPNDAEAYELRGV 163

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            Y        A+ DYD A+ L+ D  + +  + +AFY
Sbjct: 164 VYTEQRRLDRALADYDQAIRLKPDYAQAYADRGVAFY 200


>gi|425447075|ref|ZP_18827069.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
           aeruginosa PCC 9443]
 gi|389732454|emb|CCI03612.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
           aeruginosa PCC 9443]
          Length = 317

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 61/246 (24%), Positives = 119/246 (48%), Gaps = 6/246 (2%)

Query: 372 RISKS-KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           R+ K+ KS+ + + L  GI Q+  G Y  A+  F+Q L+++     A   R     + ++
Sbjct: 37  RLGKAEKSVRLSYWLRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYLQD 96

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
              A  D T ++Q       A+  RG A   LG+  +A+ D ++ +  +P      + RG
Sbjct: 97  YLHAWQDCTRSLQQQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIRLKPTYYQAYYNRG 156

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           +V    K++  A+ D +  ++     +     + Y   GL+  ++  +  A+    +A++
Sbjct: 157 LVQAAMKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFTQALR 216

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           L++N   A+ +L      L   ++++  L + + ID  ++ AY  RGLL H LG ++ A+
Sbjct: 217 LNKNNASAYYNLACTAHQLGEYDRSIAHLNRAIAIDPFYADAYIRRGLLRHQLGYYQSAL 276

Query: 606 KDLSSG 611
            DL+ G
Sbjct: 277 ADLNQG 282



 Score = 49.7 bits (117), Expect = 0.010,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 96/254 (37%), Gaps = 46/254 (18%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W R G  +   G   +A+QD +++LE E N A     R +     +D+  A +D +  ++
Sbjct: 50  WLRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYLQDYLHAWQDCTRSLQ 109

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
              +N  AY + GLA   +G+Y +A                    LT +           
Sbjct: 110 QQSDNYLAYFHRGLAFYRLGDYSQA--------------------LTDY----------- 138

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL----GIDPSNIECLYLRAS 627
               Q + +   + +AY+ RGL+   +  +  A+ D +  L       P  +  +Y    
Sbjct: 139 ---NQTIRLKPTYYQAYYNRGLVQAAMKNYPLALADFNQSLRQITNQQPDTLATIYNDRG 195

Query: 628 CYH-AIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
             H A+  +  A  D+  AL L  ++         A+Y      +   + +      +  
Sbjct: 196 LSHLALHNFTSAKADFTQALRLNKNNAS-------AYYNLACTAHQLGEYDRSIAHLNRA 248

Query: 687 GDIDPLFKEYWCKR 700
             IDP + + + +R
Sbjct: 249 IAIDPFYADAYIRR 262


>gi|375256532|ref|YP_005015699.1| tetratricopeptide repeat protein [Tannerella forsythia ATCC 43037]
 gi|363408864|gb|AEW22550.1| tetratricopeptide repeat protein [Tannerella forsythia ATCC 43037]
          Length = 695

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 125/287 (43%), Gaps = 40/287 (13%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++K  P   E    R  A+    + + A  D + +++ NP   +A+  RG
Sbjct: 39  YVLSIQYFNQVIKAKPWLAEPYFYRAVAKLNLDDFKGAEEDCSLSLERNPFLAQAYYARG 98

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN---------------- 500
            AR +L    EAI+D +K LEF+P+   ++  + I   + KDF+                
Sbjct: 99  IARQSLEMYDEAIEDYNKGLEFKPDDRPMMSNKAIAYVQKKDFSDAEHVFEDLIHAHPQY 158

Query: 501 ------------------AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
                              A+ D    +++D  +   Y    + L   G +K A     +
Sbjct: 159 SLGYLTRGAMYLEKGDTALALNDYDKAIEIDPYHAPCYGNRAIVLYQTGRFKDALADLNE 218

Query: 543 AIQLDRNFLEAWGHLTQ---FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
           AI+L  N  E+  ++ +    YQ + +   A+    QV+ +D R   A   RGLL   +G
Sbjct: 219 AIRL--NTRESGYYINRGLVRYQ-MNDLRGAMADYDQVIDMDNRNLIARFNRGLLRAQVG 275

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
            + +AI+D    L  +P N    Y RA   H +G+YR AI+D D  L
Sbjct: 276 DNNRAIEDFDVVLEQEPDNYMAYYNRALLNHEVGDYRGAIRDIDVVL 322



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 119/266 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+ +   Y  AI  +++ L+  P     +  +  A   +++   A   F + I ++
Sbjct: 96  ARGIARQSLEMYDEAIEDYNKGLEFKPDDRPMMSNKAIAYVQKKDFSDAEHVFEDLIHAH 155

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P     +  RG      G++  A+ D  KA+E +P  A     R IV ++   F  A+ D
Sbjct: 156 PQYSLGYLTRGAMYLEKGDTALALNDYDKAIEIDPYHAPCYGNRAIVLYQTGRFKDALAD 215

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L+  ++L+      Y   GL    + + + A   + + I +D   L A  +       + 
Sbjct: 216 LNEAIRLNTRESGYYINRGLVRYQMNDLRGAMADYDQVIDMDNRNLIARFNRGLLRAQVG 275

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           ++ +A+E    VL  +     AY+ R LL H +G ++ AI+D+   L   P+ +   Y R
Sbjct: 276 DNNRAIEDFDVVLEQEPDNYMAYYNRALLNHEVGDYRGAIRDIDVVLKQYPNFLPGYYSR 335

Query: 626 ASCYHAIGEYREAIKDYDAALDLELD 651
           A     + +   A +DY  A+ LE D
Sbjct: 336 AEAKRKLNDLSGADRDYLTAMKLEQD 361



 Score = 61.6 bits (148), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 5/92 (5%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I  +D ++++ P +  +   RG  R  QR+  AAI+D+ EAI  +P   EA+  RG AR 
Sbjct: 603 IRDYDFVIRQAPGFIYSYYNRGNLRCAQRDFRAAIADYNEAILRDPEFAEAYFNRGLARL 662

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           + G++   I DLSKA E       IL+  GI+
Sbjct: 663 SQGDATHGIADLSKAGEL-----GILNAYGII 689



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 69/152 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG   + +G  A A++ +D+ ++ DP +      R          + A++D  EAI+ 
Sbjct: 163 LTRGAMYLEKGDTALALNDYDKAIEIDPYHAPCYGNRAIVLYQTGRFKDALADLNEAIRL 222

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N      +  RG  R  + +   A+ D  + ++ +  +      RG++  +  D N A+E
Sbjct: 223 NTRESGYYINRGLVRYQMNDLRGAMADYDQVIDMDNRNLIARFNRGLLRAQVGDNNRAIE 282

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           D    ++ + +N  AY    L    +G+Y+ A
Sbjct: 283 DFDVVLEQEPDNYMAYYNRALLNHEVGDYRGA 314



 Score = 46.2 bits (108), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 125/309 (40%), Gaps = 50/309 (16%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           + ++RG+ +        A++ +DQ++  D     A   RG  RA   +   AI DF   +
Sbjct: 229 YYINRGLVRYQMNDLRGAMADYDQVIDMDNRNLIARFNRGLLRAQVGDNNRAIEDFDVVL 288

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +  P    A+  R      +G+   AI+D+   L+  PN     + R     K  D + A
Sbjct: 289 EQEPDNYMAYYNRALLNHEVGDYRGAIRDIDVVLKQYPNFLPGYYSRAEAKRKLNDLSGA 348

Query: 503 VEDLSACVKLDKENKSAYTYLGLA--------------------LSSIGEYKKAEE---- 538
             D    +KL+++ +        A                     + +  Y + EE    
Sbjct: 349 DRDYLTAMKLEQDKRQGQKPGAEASDNSEKGTNTREESDKNIDKFNRLVVYDRKEEQESK 408

Query: 539 --AHLKAIQLDRNF---LEAWGHLTQFYQDLANSEKALECLQQVLYIDK---RFSKAYHL 590
             + ++    DRN    LE    LT +Y+   NSE     +Q+ +Y DK   +F+    L
Sbjct: 409 YRSEIRGRVQDRNVHVDLEPQFILT-YYE--KNSE-----VQESVYYDKTVEQFNARMVL 460

Query: 591 RGLLL----------HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
              LL            +  H  +I + S+ +  +P+N +  + RA  +  + ++ EAI+
Sbjct: 461 SWKLLLTNKEAALTEEQIAMHFASINEYSAKIEREPNNPDNYFGRAIDFMLVQDFAEAIR 520

Query: 641 DYDAALDLE 649
           ++D  ++L+
Sbjct: 521 NFDKVIELD 529


>gi|255692009|ref|ZP_05415684.1| TPR domain protein [Bacteroides finegoldii DSM 17565]
 gi|260622255|gb|EEX45126.1| tetratricopeptide repeat protein [Bacteroides finegoldii DSM 17565]
          Length = 677

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD+N+A EDL + +K+    
Sbjct: 98  LARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYNSAKEDLESLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            + +A+  LQQ
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALTDFNKALELDKYDPDAW------------AARAIVKLQQ 205

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F +A HL          R L        + A+ D    L IDP+N    Y 
Sbjct: 206 SKYAEAESDFDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 265

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 266 RGLLRARVGDDNRAIEDFDFVIQMEPDNM 294



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A S FD+ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVKLQQSKYAEAESDFDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K AE+   K +  Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 361



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 6/258 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ + K+  AI  + + L  DP           +   +++  +A  D    ++ +P
Sbjct: 96  RGLARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYNSAKEDLESLLKVSP 155

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG+      +++ A+ D +KALE +    D    R IV  +   +  A  D 
Sbjct: 156 RYTRAYLMRGEVSLQQKDTIAALTDFNKALELDKYDPDAWAARAIVKLQQSKYAEAESDF 215

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
              + L  +N   Y    LA       + A   +  A+ +D  NF+   GH  +      
Sbjct: 216 DRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFI---GHYNRGLLRAR 272

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + +  +A+E    V+ ++     A   RGLL    G ++ AI+D ++ +   P+ +   Y
Sbjct: 273 VGDDNRAIEDFDFVIQMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYY 332

Query: 624 LRASCYHAIGEYREAIKD 641
            R+     IG+ + A +D
Sbjct: 333 QRSEARRKIGDKKGAEQD 350



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A SDF  AI  
Sbjct: 162 LMRGEVSLQQKDTIAALTDFNKALELDKYDPDAWAARAIVKLQQSKYAEAESDFDRAIHL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    ++++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 282 DFDFVIQMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 9/236 (3%)

Query: 458 ARAAL--GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           AR AL   + V +IQ  ++ +  +P   +    R +     +DF  A  D  A ++ +  
Sbjct: 29  ARNALYFEDYVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPF 88

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   GLA     ++  A E + KA+  D   +  W +LT  +    +   A E L+
Sbjct: 89  VVGAYQIRGLARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYNSAKEDLE 148

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            +L +  R+++AY +RG +         A+ D +  L +D  + +    RA       +Y
Sbjct: 149 SLLKVSPRYTRAYLMRGEVSLQQKDTIAALTDFNKALELDKYDPDAWAARAIVKLQQSKY 208

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
            EA  D+D A+ L   +   ++ + LA + +       + +      +D+  DIDP
Sbjct: 209 AEAESDFDRAIHLSAKNAGNYINRALARFHQ-------NNLRGAMSDYDLALDIDP 257



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   IQ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D   A +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 350 DEFKVMKAQIDKQN 363



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI+D+ +AI+ NP   +A+  RG     LG
Sbjct: 586 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIADYDKAIELNPDFADAYFNRGLTHIFLG 645

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            +   I DLSKA E    SA
Sbjct: 646 NNKLGISDLSKAGELGIVSA 665



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 26/152 (17%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
           R I  +  +DF++AV DL+  + LD +   AY    L      EY+KAE+A         
Sbjct: 511 RAIDFYLVQDFSSAVADLTQTILLDGDFFPAYFMRALIRCKQLEYQKAEQAAETNIPGDK 570

Query: 542 -----------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
                            K I L  +F+ A+ +       L +   A+    + + ++  F
Sbjct: 571 RKEITAVDYEVVRKDLDKVINLAPDFVYAYYNRANVSAMLKDYRAAIADYDKAIELNPDF 630

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           + AY  RGL    LG +K  I DLS    LGI
Sbjct: 631 ADAYFNRGLTHIFLGNNKLGISDLSKAGELGI 662


>gi|431808188|ref|YP_007235086.1| hypothetical protein BPP43_08170 [Brachyspira pilosicoli P43/6/78]
 gi|430781547|gb|AGA66831.1| TPR repeat-containing protein [Brachyspira pilosicoli P43/6/78]
          Length = 686

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 6/271 (2%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           E K+  AI + ++ +++D    E  +GR + +      E AI D+  AI+ N    + + 
Sbjct: 15  EKKFEEAIKLSNEAIEKDNKNYELYVGRASLKNVIGLYEDAIKDYNIAIELNNKDPKIYW 74

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
           +RG  ++ L +   AI+D   A++   N+  I  +RG++     D   A+ D +  +KL+
Sbjct: 75  QRGYIKSILIDYKGAIEDFDTAIKLGINAPRIFLDRGVIKSNLHDHTDAINDFNIAIKLN 134

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW---GHLTQFYQDLANSEKA 570
                AY +  L+   +G Y+ +      AI+L+ N+  A+   G L  F   L N ++A
Sbjct: 135 PYYAEAYNFRALSKIELGLYEDSNSDFNTAIKLNPNYYFAYTNRGLLNLF---LKNYDQA 191

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           L+     L IDK    +Y  R  + + LG ++ AIKD  + + I  + ++  Y++     
Sbjct: 192 LKDYDYALKIDKNSIISYRYRAQIKYILGMYEDAIKDAENAINIYNNYMDAHYIKILSKA 251

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
            +  Y E I D +    +  +    F+   L
Sbjct: 252 KLKRYIEIIDDLNIVAKINTNFENNFISDIL 282



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 63/127 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R ++++  G Y  + S F+  +K +P Y  A   RG    F +  + A+ D+  A++ + 
Sbjct: 144 RALSKIELGLYEDSNSDFNTAIKLNPNYYFAYTNRGLLNLFLKNYDQALKDYDYALKIDK 203

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           ++  +++ R Q +  LG   +AI+D   A+    N  D  + + +   K K +   ++DL
Sbjct: 204 NSIISYRYRAQIKYILGMYEDAIKDAENAINIYNNYMDAHYIKILSKAKLKRYIEIIDDL 263

Query: 507 SACVKLD 513
           +   K++
Sbjct: 264 NIVAKIN 270



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 11/198 (5%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG+ + N   +  AI+ F+  +K +P Y EA   R  ++      E + SDF  AI+ 
Sbjct: 108 LDRGVIKSNLHDHTDAINDFNIAIKLNPYYAEAYNFRALSKIELGLYEDSNSDFNTAIKL 167

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+  RG     L    +A++D   AL+ + NS      R  + +    +  A++
Sbjct: 168 NPNYYFAYTNRGLLNLFLKNYDQALKDYDYALKIDKNSIISYRYRAQIKYILGMYEDAIK 227

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-----------LEA 553
           D    + +      A+    L+ + +  Y +  +      +++ NF           LE 
Sbjct: 228 DAENAINIYNNYMDAHYIKILSKAKLKRYIEIIDDLNIVAKINTNFENNFISDILNLLET 287

Query: 554 WGHLTQFYQDLANSEKAL 571
           + ++ + +Q L  +E  L
Sbjct: 288 YSNIEKIFQLLIKTENIL 305


>gi|434385177|ref|YP_007095788.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
 gi|428016167|gb|AFY92261.1| Tfp pilus assembly protein PilF [Chamaesiphon minutus PCC 6605]
          Length = 496

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 110/244 (45%), Gaps = 7/244 (2%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG A + QR L A   D   A +   +AG +  R+G  R AL        D ++A++  P
Sbjct: 30  RGAAMSAQRPLLAQKQDRLAAAERFLAAGVSKYRKGDKRGALA-------DYNRAIQLNP 82

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
             A     RG+V     D   A+ D +  +++D +   AY   G     +G  + A E +
Sbjct: 83  RYALAHVNRGVVRSALGDRQGALSDFNRAIEIDPKYPQAYNNRGAIKYELGNKRGAIEDY 142

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI +D  F +A+ +      +L +   AL      + +D  +  AY+ RG++   LG 
Sbjct: 143 TRAIAIDYKFAQAYYNRGATRYELGDKRGALADYNIAIALDPNYGAAYYSRGVVRAELGD 202

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
            + AI+D +  + +DP++    Y R +    +G+   A  D+D A+ L      K     
Sbjct: 203 KQGAIEDYNRAIALDPNHAGAYYNRGAIKSELGDRHAASADFDRAILLNPHYASKDYRIS 262

Query: 661 LAFY 664
           +++Y
Sbjct: 263 VSYY 266



 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 95/201 (47%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E  +  G ++  + +   A++D+  AIQ NP    A   RG  R+ALG+   A+ D ++A
Sbjct: 52  ERFLAAGVSKYRKGDKRGALADYNRAIQLNPRYALAHVNRGVVRSALGDRQGALSDFNRA 111

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           +E +P      + RG + ++  +   A+ED +  + +D +   AY   G     +G+ + 
Sbjct: 112 IEIDPKYPQAYNNRGAIKYELGNKRGAIEDYTRAIAIDYKFAQAYYNRGATRYELGDKRG 171

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A   +  AI LD N+  A+        +L + + A+E   + + +D   + AY+ RG + 
Sbjct: 172 ALADYNIAIALDPNYGAAYYSRGVVRAELGDKQGAIEDYNRAIALDPNHAGAYYNRGAIK 231

Query: 596 HGLGQHKKAIKDLSSGLGIDP 616
             LG    A  D    + ++P
Sbjct: 232 SELGDRHAASADFDRAILLNP 252



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 107/221 (48%), Gaps = 7/221 (3%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+ G+++  +G    A++ +++ ++ +P Y  A + RG  R+   + + A+SDF  AI+ 
Sbjct: 55  LAAGVSKYRKGDKRGALADYNRAIQLNPRYALAHVNRGVVRSALGDRQGALSDFNRAIEI 114

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P   +A+  RG  +  LG    AI+D ++A+  +   A   + RG   ++  D   A+ 
Sbjct: 115 DPKYPQAYNNRGAIKYELGNKRGAIEDYTRAIAIDYKFAQAYYNRGATRYELGDKRGALA 174

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  + LD    +AY   G+  + +G+ + A E + +AI LD N   A+ +      +L
Sbjct: 175 DYNIAIALDPNYGAAYYSRGVVRAELGDKQGAIEDYNRAIALDPNHAGAYYNRGAIKSEL 234

Query: 565 ANSEKALECLQQVLYI-------DKRFSKAYHLRGLLLHGL 598
            +   A     + + +       D R S +Y+   ++ H L
Sbjct: 235 GDRHAASADFDRAILLNPHYASKDYRISVSYYSPIVIFHPL 275


>gi|113475342|ref|YP_721403.1| hypothetical protein Tery_1657, partial [Trichodesmium erythraeum
           IMS101]
 gi|110166390|gb|ABG50930.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 594

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 118/264 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L  GI   + G +  AI+ ++Q L+E P Y +A + R  A     +   AI D   AIQ 
Sbjct: 81  LQAGIDLEDIGDHQGAIAKYNQALQESPNYTKAYVERSAAYTKLGKHSIAIEDADRAIQF 140

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P+   A+ +R      L    +AI    + L   PN     +++G    +      A +
Sbjct: 141 EPAYANAYVQRADVDFRLNNYQQAISIYDRGLRLNPNLPLAYYDQGRCFLQLGKKKQAQD 200

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +K+  +    Y   G  LS + E+ KA E   +A++L+ N + A+ H    +  L
Sbjct: 201 CWHEGLKIIPKTSDDYNTRGAILSQLEEHSKALEEFQEALRLNNNNIGAYVHRAMAHSAL 260

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N +  ++   + L ++   +  Y  RG+     G+ KKAI++    L I+         
Sbjct: 261 GNHQAVMDNFDKALSLNSNDADIYGWRGIHFEQTGELKKAIEEFDKALQINYKYTVVYAE 320

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R  CY  +G  +EAIKD++ AL++
Sbjct: 321 RGKCYSWLGNQQEAIKDFNRALEI 344



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 126/264 (47%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + R  A    GK++ AI   D+ ++ +P Y  A + R          + AIS +   ++ 
Sbjct: 115 VERSAAYTKLGKHSIAIEDADRAIQFEPAYANAYVQRADVDFRLNNYQQAISIYDRGLRL 174

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+  +G+    LG+  +A     + L+  P ++D  + RG +  + ++ + A+E
Sbjct: 175 NPNLPLAYYDQGRCFLQLGKKKQAQDCWHEGLKIIPKTSDDYNTRGAILSQLEEHSKALE 234

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           +    ++L+  N  AY +  +A S++G ++   +   KA+ L+ N  + +G     ++  
Sbjct: 235 EFQEALRLNNNNIGAYVHRAMAHSALGNHQAVMDNFDKALSLNSNDADIYGWRGIHFEQT 294

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              +KA+E   + L I+ +++  Y  RG     LG  ++AIKD +  L I P+N      
Sbjct: 295 GELKKAIEEFDKALQINYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAPNNSYAYDA 354

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
             + Y  + +  EA + +  AL L
Sbjct: 355 LGTAYLYLNDIEEAEQKFKKALKL 378



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 9/269 (3%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           VDFRL+          Y  AISI+D+ L+ +P  P A   +G       + + A   + E
Sbjct: 154 VDFRLNN---------YQQAISIYDRGLRLNPNLPLAYYDQGRCFLQLGKKKQAQDCWHE 204

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            ++  P   + +  RG   + L E  +A+++  +AL    N+      R + +    +  
Sbjct: 205 GLKIIPKTSDDYNTRGAILSQLEEHSKALEEFQEALRLNNNNIGAYVHRAMAHSALGNHQ 264

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           A +++    + L+  +   Y + G+     GE KKA E   KA+Q++  +   +    + 
Sbjct: 265 AVMDNFDKALSLNSNDADIYGWRGIHFEQTGELKKAIEEFDKALQINYKYTVVYAERGKC 324

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           Y  L N ++A++   + L I    S AY   G     L   ++A +     L ++P+N  
Sbjct: 325 YSWLGNQQEAIKDFNRALEIAPNNSYAYDALGTAYLYLNDIEEAEQKFKKALKLNPNNPL 384

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLE 649
                   +    ++ EAI  Y  AL +E
Sbjct: 385 AHCGIGVVFGFKEKWEEAIAAYQEALCIE 413



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 104/233 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + R +A    G + + +  FD+ L  +    +    RG       EL+ AI +F +A+Q 
Sbjct: 251 VHRAMAHSALGNHQAVMDNFDKALSLNSNDADIYGWRGIHFEQTGELKKAIEEFDKALQI 310

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N      +  RG+  + LG   EAI+D ++ALE  PN++      G       D   A +
Sbjct: 311 NYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAPNNSYAYDALGTAYLYLNDIEEAEQ 370

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +KL+  N  A+  +G+      ++++A  A+ +A+ ++    + +  L Q +   
Sbjct: 371 KFKKALKLNPNNPLAHCGIGVVFGFKEKWEEAIAAYQEALCIEPKLAQGYDGLGQAFFMQ 430

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              ++A+   ++ L I   F+  ++  G+ L    +  +A+      + +DP+
Sbjct: 431 GKLDEAIHAYKKALGIAPNFTIVHNKLGVALEQQKKEDEAVAAYKEAISLDPN 483



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 23/283 (8%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGI     G+   AI  FD+ L+ +  Y      RG   ++    + AI DF  A++  P
Sbjct: 287 RGIHFEQTGELKKAIEEFDKALQINYKYTVVYAERGKCYSWLGNQQEAIKDFNRALEIAP 346

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI-VNFKFKD-FNAAVE 504
           +   A+   G A   L +  EA Q   KAL+  PN+   L   GI V F FK+ +  A+ 
Sbjct: 347 NNSYAYDALGTAYLYLNDIEEAEQKFKKALKLNPNNP--LAHCGIGVVFGFKEKWEEAIA 404

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                + ++ +    Y  LG A    G+  +A  A+ KA+ +  NF      L    +  
Sbjct: 405 AYQEALCIEPKLAQGYDGLGQAFFMQGKLDEAIHAYKKALGIAPNFTIVHNKLGVALEQQ 464

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLL-------HGLGQHKKAIKDLSSGLGIDPS 617
              ++A+   ++ + +D  F+ A    G  L        G+   KKA +DL      D  
Sbjct: 465 KKEDEAVAAYKEAISLDPNFATARANLGYALLKQDRTTDGIANLKKA-RDLFQTQNQDKE 523

Query: 618 -----NIECL------YLRASCYHAIGEYREAIKDYDAALDLE 649
                N  C       Y +       G+Y+EAI +Y+ A+ L+
Sbjct: 524 ASKIDNFLCKRESESHYRKGEKLSKQGKYQEAIAEYEEAIRLD 566


>gi|425470311|ref|ZP_18849181.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
           aeruginosa PCC 9701]
 gi|389884127|emb|CCI35562.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
           aeruginosa PCC 9701]
          Length = 317

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/241 (24%), Positives = 115/241 (47%), Gaps = 5/241 (2%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           ++S+ + + L  GI Q+  G Y  A+  F+Q L+ +     A   R     + ++   A 
Sbjct: 42  AQSVHLSYWLRSGIEQLEAGNYPQALQDFNQSLERENNLALAYSNRCLTEIYLQDYLHAW 101

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            D T ++Q       A+  RG A   LG+  +A+ D ++ +  +P      + RG+V   
Sbjct: 102 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYPQALTDYNQTIRLKPTYYQAYYNRGLVQAA 161

Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            K++  A+ D +  ++     +     + Y   GL+  ++  +  A+    +A+QL++N 
Sbjct: 162 MKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFNQALQLNKNN 221

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +L      L   E+++  L + + ID  ++ AY  RGLL H LG ++ A+ DL+ 
Sbjct: 222 ASAYYNLACTAHQLGEYERSIADLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281

Query: 611 G 611
           G
Sbjct: 282 G 282


>gi|434405193|ref|YP_007148078.1| putative low-complexity protein [Cylindrospermum stagnale PCC 7417]
 gi|428259448|gb|AFZ25398.1| putative low-complexity protein [Cylindrospermum stagnale PCC 7417]
          Length = 576

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 4/209 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+A      Y +A++ F++ ++ DP Y +A   RG  R  Q++ + A+ DF +AI+ N
Sbjct: 328 SRGLAFSQLKDYQAALADFNRAIEIDPNYAKAYNSRGLTRIEQQDYQNALVDFEQAIRLN 387

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+  R   R    +    I D S A+          + RG+  F  +D+  A++D
Sbjct: 388 PNYAEAYNGRATIRRIQKDYAAVIVDASLAIRINSKFGAAYNNRGLARFAQQDYQGAIKD 447

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
             + +        AY   GLA  +IGEYK A   + +AI +D+N+++A+    L +F + 
Sbjct: 448 YDSAIGNSSNWAWAYFNRGLAKYTIGEYKDATGDYDRAIDIDQNYVDAYYQRSLARFAR- 506

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRG 592
               E A++   +V+  D  + +AY  +G
Sbjct: 507 -KKYEDAIKDCDRVIQKDPNYGEAYENQG 534



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 126/260 (48%), Gaps = 4/260 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G  Q ++ +Y SAI+ ++Q +  +P   +    RG A +  ++ +AA++DF  AI+ +P+
Sbjct: 296 GDNQYSKREYKSAIAYYNQAIALNPQDTQGYTSRGLAFSQLKDYQAALADFNRAIEIDPN 355

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             +A+  RG  R    +   A+ D  +A+   PN A+  + R  +    KD+ A + D S
Sbjct: 356 YAKAYNSRGLTRIEQQDYQNALVDFEQAIRLNPNYAEAYNGRATIRRIQKDYAAVIVDAS 415

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++++ +  +AY   GLA  +  +Y+ A + +  AI    N+  AW +  +        
Sbjct: 416 LAIRINSKFGAAYNNRGLARFAQQDYQGAIKDYDSAIGNSSNW--AWAYFNRGLAKYTIG 473

Query: 568 E--KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           E   A     + + ID+ +  AY+ R L      +++ AIKD    +  DP+  E    +
Sbjct: 474 EYKDATGDYDRAIDIDQNYVDAYYQRSLARFARKKYEDAIKDCDRVIQKDPNYGEAYENQ 533

Query: 626 ASCYHAIGEYREAIKDYDAA 645
            + + A+ +  EA + ++ A
Sbjct: 534 GNSFLALKKKPEAKQAFEQA 553



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 9/213 (4%)

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
           E   AI   ++A+   P        RG+   + KD+ AA+ D +  +++D     AY   
Sbjct: 304 EYKSAIAYYNQAIALNPQDTQGYTSRGLAFSQLKDYQAALADFNRAIEIDPNYAKAYNSR 363

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           GL      +Y+ A     +AI+L+ N+ EA+       +   +    +      + I+ +
Sbjct: 364 GLTRIEQQDYQNALVDFEQAIRLNPNYAEAYNGRATIRRIQKDYAAVIVDASLAIRINSK 423

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDY 642
           F  AY+ RGL       ++ AIKD  S +G + SN    Y  R    + IGEY++A  DY
Sbjct: 424 FGAAYNNRGLARFAQQDYQGAIKDYDSAIG-NSSNWAWAYFNRGLAKYTIGEYKDATGDY 482

Query: 643 DAALDLELDSMEKFVLQCLAFYQKEIALYTASK 675
           D A+D++ + ++       A+YQ+ +A +   K
Sbjct: 483 DRAIDIDQNYVD-------AYYQRSLARFARKK 508


>gi|29345831|ref|NP_809334.1| hypothetical protein BT_0421 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29337724|gb|AAO75528.1| tetratricopeptide repeat (TPR) family protein [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 683

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 8/261 (3%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D  EAI+ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKVNLEDYQGAEADCDEAIKRNPFVVGAYQVRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD++AA EDL + +K+    
Sbjct: 98  LARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLK----AIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
             AY   G     +   +K   A LK    A++LD+   +AW          +N  +A  
Sbjct: 158 TRAYLMRG----EVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNYAEAES 213

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
            L + +++  + +  Y  R L        + A+ D    L IDP+N    Y R      +
Sbjct: 214 DLDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARV 273

Query: 633 GEYREAIKDYDAALDLELDSM 653
           G+   AI+D+D  + +E D+M
Sbjct: 274 GDDNRAIEDFDFVIQMEPDNM 294



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 6/268 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ + K+  AI  + + L  DP           +   +++ +AA  D    ++ +P
Sbjct: 96  RGLARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSP 155

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG+      ++V A++D + ALE +    D    R IV  +  ++  A  DL
Sbjct: 156 RYTRAYLMRGEVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNYAEAESDL 215

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
              + L  +N   Y    LA       + A   +  A+ +D  NF+   GH  +      
Sbjct: 216 DRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFI---GHYNRGLLRAR 272

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + +  +A+E    V+ ++     A   R LL    G ++ AIKD ++ +   P+ +   Y
Sbjct: 273 VGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKDYTTVINQYPNFLAGYY 332

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            RA     IG+ + A +D    L  +LD
Sbjct: 333 HRAEARKKIGDKKGAEQDDFKLLKAQLD 360



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ +  YA A S  D+ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVRLQQSNYAEAESDLDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  R ++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y +   A   IG+ K AE+   K +  QLD+
Sbjct: 317 YTTVINQYPNFLAGYYHRAEARKKIGDKKGAEQDDFKLLKAQLDK 361



 Score = 57.4 bits (137), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 73/172 (42%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A+  F+  L+ D   P+A   R   R  Q     A SD   AI  
Sbjct: 162 LMRGEVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNYAEAESDLDRAIHL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           D    ++++ +N  A     L  +  G+Y+ A + +   I    NFL  + H
Sbjct: 282 DFDFVIQMEPDNMMAIFNRALLRAQTGDYRGAIKDYTTVINQYPNFLAGYYH 333



 Score = 56.2 bits (134), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 9/236 (3%)

Query: 458 ARAAL--GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           AR AL   + V +IQ  ++ +  +P   +    R +     +D+  A  D    +K +  
Sbjct: 29  ARNALYFEDYVLSIQYFNQVINAKPYLYEPYFFRALAKVNLEDYQGAEADCDEAIKRNPF 88

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   GLA     ++  A E + KA+  D   +  W +LT  +    + + A E L+
Sbjct: 89  VVGAYQVRGLARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLE 148

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            +L +  R+++AY +RG +         A+KD ++ L +D  + +    RA        Y
Sbjct: 149 SLLKVSPRYTRAYLMRGEVSLQQKDTVAALKDFNTALELDKYDPDAWSARAIVRLQQSNY 208

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
            EA  D D A+ L   +   ++ + LA + +       + +      +D+  DIDP
Sbjct: 209 AEAESDLDRAIHLSAKNAGNYINRALARFHQ-------NNLRGAMSDYDLALDIDP 257



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AIQ +P   +A+  RG     LG
Sbjct: 592 LDKVITLAPDFVYAYYNRANVAAMLKDYRAAIVDYDKAIQLSPDFADAYFNRGLTHIFLG 651

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            +   I DLSKA E    SA
Sbjct: 652 NNKAGISDLSKAGELGVVSA 671



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   IQ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   R   RA  G+   AI+D +  +   PN     + R     K  D   A +
Sbjct: 290 EPDNMMAIFNRALLRAQTGDYRGAIKDYTTVINQYPNFLAGYYHRAEARKKIGDKKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  LDK+N
Sbjct: 350 DDFKLLKAQLDKQN 363



 Score = 40.0 bits (92), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 27/153 (17%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
           R I  +  +DF++AV DL+  + LD +   AY    L      EY+KAE+A         
Sbjct: 516 RAIDFYLVQDFSSAVADLTQAILLDGDFFPAYFMRALIRCKQLEYQKAEQAAEADMPSGA 575

Query: 542 ------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
                             K I L  +F+ A+ +       L +   A+    + + +   
Sbjct: 576 AVKEVSAVDYEVVRKDLDKVITLAPDFVYAYYNRANVAAMLKDYRAAIVDYDKAIQLSPD 635

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           F+ AY  RGL    LG +K  I DLS    LG+
Sbjct: 636 FADAYFNRGLTHIFLGNNKAGISDLSKAGELGV 668


>gi|383312849|ref|YP_005365650.1| hypothetical protein MCE_05880 [Candidatus Rickettsia amblyommii
           str. GAT-30V]
 gi|378931509|gb|AFC70018.1| hypothetical protein MCE_05880 [Candidatus Rickettsia amblyommii
           str. GAT-30V]
          Length = 388

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 115/222 (51%)

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ      E +   G+A   LG+  EA+++ + A++++P+ AD  + +G++  K   +  
Sbjct: 42  IQDQNILAEEYFNIGRAFYKLGKYKEAVKNFNLAIQYKPHYADAYNYQGMILAKLGKYEE 101

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+++    +K + +   AY   G++   +G+Y++A   +  AI+   NF   + +     
Sbjct: 102 AIKNYDLAIKYEFDFAEAYNNKGVSYKKLGKYQEAIALYNIAIKYKPNFAAVYNNKGDVL 161

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             L   ++A+  +   L  + ++ +AY+ +G+ L  LGQ+++AI++    +   P     
Sbjct: 162 NSLGKYQEAINNVDLALNYNLKYPEAYYNKGISLINLGQYQEAIENCDLAVKYKPDYAYA 221

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            Y +A+    +G+Y EAIK +D+A+  +LD    + L+  AF
Sbjct: 222 YYNKATSLMQLGKYHEAIKSFDSAIKYKLDDEATYGLKGYAF 263



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 130/275 (47%), Gaps = 2/275 (0%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           F + R   ++  GKY  A+  F+  ++  P Y +A   +G   A   + E AI ++  AI
Sbjct: 53  FNIGRAFYKL--GKYKEAVKNFNLAIQYKPHYADAYNYQGMILAKLGKYEEAIKNYDLAI 110

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +      EA+  +G +   LG+  EAI   + A++++PN A + + +G V      +  A
Sbjct: 111 KYEFDFAEAYNNKGVSYKKLGKYQEAIALYNIAIKYKPNFAAVYNNKGDVLNSLGKYQEA 170

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + ++   +  + +   AY   G++L ++G+Y++A E    A++   ++  A+ +      
Sbjct: 171 INNVDLALNYNLKYPEAYYNKGISLINLGQYQEAIENCDLAVKYKPDYAYAYYNKATSLM 230

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            L    +A++     +         Y L+G     LG H++AIK+    +   PS++   
Sbjct: 231 QLGKYHEAIKSFDSAIKYKLDDEATYGLKGYAFSILGNHQEAIKNYDLAINYKPSDVAAY 290

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
             + +    +G+Y+EAI  YD A+  + D  E ++
Sbjct: 291 CNKGTSLRKLGKYQEAIHSYDLAIKRKSDYAESYL 325



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/235 (20%), Positives = 116/235 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G++    GKY  AI++++  +K  P +      +G       + + AI++   A+  N
Sbjct: 122 NKGVSYKKLGKYQEAIALYNIAIKYKPNFAAVYNNKGDVLNSLGKYQEAINNVDLALNYN 181

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EA+  +G +   LG+  EAI++   A++++P+ A   + +     +   ++ A++ 
Sbjct: 182 LKYPEAYYNKGISLINLGQYQEAIENCDLAVKYKPDYAYAYYNKATSLMQLGKYHEAIKS 241

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             + +K   ++++ Y   G A S +G +++A + +  AI    + + A+ +     + L 
Sbjct: 242 FDSAIKYKLDDEATYGLKGYAFSILGNHQEAIKNYDLAINYKPSDVAAYCNKGTSLRKLG 301

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
             ++A+      +     ++++Y  +G+ L  +G+HK+A ++ +  L   P+ IE
Sbjct: 302 KYQEAIHSYDLAIKRKSDYAESYLEKGITLISMGKHKEAKENFNLALKYKPNLIE 356



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 77/169 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI+ +N G+Y  AI   D  +K  P Y  A   + T+     +   AI  F  AI+  
Sbjct: 190 NKGISLINLGQYQEAIENCDLAVKYKPDYAYAYYNKATSLMQLGKYHEAIKSFDSAIKYK 249

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                 +  +G A + LG   EAI++   A+ ++P+       +G    K   +  A+  
Sbjct: 250 LDDEATYGLKGYAFSILGNHQEAIKNYDLAINYKPSDVAAYCNKGTSLRKLGKYQEAIHS 309

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +K   +   +Y   G+ L S+G++K+A+E    A++   N +E +
Sbjct: 310 YDLAIKRKSDYAESYLEKGITLISMGKHKEAKENFNLALKYKPNLIEEY 358


>gi|170760451|ref|YP_001787374.1| hypothetical protein CLK_1436 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169407440|gb|ACA55851.1| tetratricopeptide repeat family protein [Clostridium botulinum A3
           str. Loch Maree]
          Length = 251

 Score = 89.4 bits (220), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 97/223 (43%), Gaps = 34/223 (15%)

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +   ++  I  +T +I+  PS  +A+  R +    L E  ++I+D +K LE  P   D  
Sbjct: 34  YSSNIKDKIKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYNKILELNPKDKDCY 93

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + R IV +  K+++ +++DL   V +DK  K+ Y   G+    I +YK+A     KAI  
Sbjct: 94  NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHE 153

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           D                                   R S+AY  R L  + L ++  +IK
Sbjct: 154 DS----------------------------------RDSEAYENRALAYYNLKKYSPSIK 179

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           D ++ L + P N      R + Y+ I  Y  AI DY  ALD +
Sbjct: 180 DYTNALKLTPGNKNIYLNRGTVYYKIKNYENAISDYMKALDFK 222



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 60/135 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I       Y  ++   D ++  D  Y      RG       + + A  +FT+AI  +
Sbjct: 95  NRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHED 154

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EA++ R  A   L +   +I+D + AL+  P + +I   RG V +K K++  A+ D
Sbjct: 155 SRDSEAYENRALAYYNLKKYSPSIKDYTNALKLTPGNKNIYLNRGTVYYKIKNYENAISD 214

Query: 506 LSACVKLDKENKSAY 520
               +   +++ S Y
Sbjct: 215 YMKALDFKEKDPSFY 229



 Score = 45.8 bits (107), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/189 (18%), Positives = 76/189 (40%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I  +   +K  P + +A   R        E   +I D+ + ++ NP   + +  R     
Sbjct: 42  IKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYNKILELNPKDKDCYNNRAIVYY 101

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +    +++QDL   +  + +  +I   RG+V    +D+  A  + +  +  D  +  AY
Sbjct: 102 LIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDSRDSEAY 161

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
               LA  ++ +Y  + + +  A++L       + +    Y  + N E A+    + L  
Sbjct: 162 ENRALAYYNLKKYSPSIKDYTNALKLTPGNKNIYLNRGTVYYKIKNYENAISDYMKALDF 221

Query: 581 DKRFSKAYH 589
            ++    YH
Sbjct: 222 KEKDPSFYH 230



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 42/104 (40%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+  +    Y  A   F + + ED    EA   R  A    ++   +I D+T A++ 
Sbjct: 128 FNRGMVFLGIEDYKRAAIEFTKAIHEDSRDSEAYENRALAYYNLKKYSPSIKDYTNALKL 187

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            P     +  RG     +     AI D  KAL+F+       H+
Sbjct: 188 TPGNKNIYLNRGTVYYKIKNYENAISDYMKALDFKEKDPSFYHK 231



 Score = 41.2 bits (95), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 42/225 (18%), Positives = 88/225 (39%), Gaps = 8/225 (3%)

Query: 322 NTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISV 381
           N N   ++K S+  NK   + E     ++        S+  K   KF    I K K   +
Sbjct: 5   NFNEFKFAKKSVKRNKCESNAEKFFSNAY-------YSSNIKDKIKFYTISI-KLKPSFI 56

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +R        +Y  +I  +++IL+ +P   +    R       +  + ++ D    
Sbjct: 57  DAYFNRAELYKELEEYNKSIEDYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDVL 116

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +  +      +  RG     + +   A  + +KA+  +   ++    R +  +  K ++ 
Sbjct: 117 VSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDSRDSEAYENRALAYYNLKKYSP 176

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +++D +  +KL   NK+ Y   G     I  Y+ A   ++KA+  
Sbjct: 177 SIKDYTNALKLTPGNKNIYLNRGTVYYKIKNYENAISDYMKALDF 221


>gi|425451529|ref|ZP_18831350.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
 gi|389767119|emb|CCI07396.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
          Length = 707

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 129/263 (49%), Gaps = 1/263 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
           +Y  A++ + Q LK +P Y EAL G+  A    +    A++ + +AIQ NP SA +AW  
Sbjct: 347 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 406

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG+A   L ++ EA++   + L   P ++     +  +  + + ++AA + L   +   +
Sbjct: 407 RGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQ 466

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +   +   G +L ++ +Y+ A +A+ +A+ ++ +    W         L     ALE  
Sbjct: 467 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 526

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            +    + +FS+AY+ +G++L  LG++ +A++  +     + +  +    + +  H +  
Sbjct: 527 SKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLER 586

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
           ++EAI  Y+ A  +     E F+
Sbjct: 587 FQEAIASYEKARRISSRKSEVFI 609



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 123/260 (47%), Gaps = 1/260 (0%)

Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y+ A++ +++ ++ +P    +A +GRG A     + + A+  F   +  NP+A +AW+ 
Sbjct: 381 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQG 440

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      L +   A + L K L F+ N A I +++G      +D+  AV+     + ++ 
Sbjct: 441 KADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 500

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +N   +   G +L  + +   A E++ KA Q +  F +A+       Q L  + +ALE  
Sbjct: 501 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAF 560

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q    +  + +A+  +G LLH L + ++AI        I     E      + ++ +G+
Sbjct: 561 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAWYRLGD 620

Query: 635 YREAIKDYDAALDLELDSME 654
           Y +AI  Y  A+  + D+ E
Sbjct: 621 YSQAITAYQQAIQRQKDNPE 640



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 8/210 (3%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +++G   ++ K +  A+      +K++ +   A      AL ++  Y +A   + KAIQ+
Sbjct: 336 YQQGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQI 395

Query: 547 DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           + +   +AW    +    L  +++ALE  ++VL ++   S+A+  +  +   L Q+  A 
Sbjct: 396 NPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQ 455

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           K L   L    ++ +  Y +      + +Y  A+K YD AL +E D+        L +YQ
Sbjct: 456 KALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDN-------ALIWYQ 508

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           K  +LY  +KIN+    +   G  +P F +
Sbjct: 509 KGNSLYQLNKINNALESYSKAGQFNPQFSQ 538



 Score = 40.4 bits (93), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 8/193 (4%)

Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
           LN  N   ESYSK+   + + S +  S+  +      L++    ++  + F  T+ +K+ 
Sbjct: 516 LNKINNALESYSKAGQFNPQFSQAYYSQGII------LQKLGRNSEALEAF--TQATKAN 567

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S      L++G       ++  AI+ +++  +      E  IG G A     +   AI+ 
Sbjct: 568 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAWYRLGDYSQAITA 627

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +AIQ      E WK  G +   LG+   AIQ   ++L +  N  ++  ++ +   +++
Sbjct: 628 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 687

Query: 498 DFNAAVEDLSACV 510
           +   + ++ +  V
Sbjct: 688 ELQQSPQNPTPKV 700


>gi|425434175|ref|ZP_18814646.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
 gi|389677169|emb|CCH93904.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
          Length = 736

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 129/263 (49%), Gaps = 1/263 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
           +Y  A++ + Q LK +P Y EAL G+  A    +    A++ + +AIQ NP SA +AW  
Sbjct: 376 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 435

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG+A   L ++ EA++   + L   P ++     +  +  + + ++AA + L   +   +
Sbjct: 436 RGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 495

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +   +   G +L ++ +Y+ A +A+ +A+ ++ +    W         L     ALE  
Sbjct: 496 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 555

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            +    + +FS+AY+ +G++L  LG++ +A++  +     + +  +    + +  H +  
Sbjct: 556 SKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLER 615

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
           ++EAI  Y+ A  +     E F+
Sbjct: 616 FQEAIASYEKARRISSRKSEVFI 638



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 3/261 (1%)

Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y+ A++ +++ ++ +P    +A +GRG A     + + A+  F   +  NP+A +AW+ 
Sbjct: 410 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQG 469

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      L +   A + L K L F+ N A I +++G      +D+  AV+     + ++ 
Sbjct: 470 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 529

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +N   +   G +L  + +   A E++ KA Q +  F +A+       Q L  + +ALE  
Sbjct: 530 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAYYSQGIILQKLGRNSEALEAF 589

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY-LRASCYHAIG 633
            Q    +  + +A+  +G LLH L + ++AI        I     E    +  +CY  +G
Sbjct: 590 TQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYR-LG 648

Query: 634 EYREAIKDYDAALDLELDSME 654
           +Y +AI  Y  A+  + D+ E
Sbjct: 649 DYSQAITAYQQAIQRQKDNPE 669



 Score = 60.1 bits (144), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 8/210 (3%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +++G   ++ K +  A+      +K++ +   A      AL ++  Y +A   + KAIQ+
Sbjct: 365 YQQGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQI 424

Query: 547 DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           + +   +AW    +    L  +++ALE  ++VL ++   S+A+  +  +   L Q+  A 
Sbjct: 425 NPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQ 484

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           K L   L    ++ +  Y +      + +Y  A+K YD AL +E D+        L +YQ
Sbjct: 485 KALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDN-------ALIWYQ 537

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           K  +LY  +KIN+    +   G  +P F +
Sbjct: 538 KGNSLYQLNKINNALESYSKAGQFNPQFSQ 567



 Score = 39.7 bits (91), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 8/193 (4%)

Query: 318 LNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSK 377
           LN  N   ESYSK+   + + S +  S+  +      L++    ++  + F  T+ +K+ 
Sbjct: 545 LNKINNALESYSKAGQFNPQFSQAYYSQGII------LQKLGRNSEALEAF--TQATKAN 596

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S      L++G       ++  AI+ +++  +      E  IG G A     +   AI+ 
Sbjct: 597 SNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITA 656

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           + +AIQ      E WK  G +   LG+   AIQ   ++L +  N  ++  ++ +   +++
Sbjct: 657 YQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSNDQEVQTQKQLAETRWQ 716

Query: 498 DFNAAVEDLSACV 510
           +   + ++ +  V
Sbjct: 717 ELQQSPQNPTPKV 729


>gi|327399475|ref|YP_004340344.1| hypothetical protein Hipma_1328 [Hippea maritima DSM 10411]
 gi|327182104|gb|AEA34285.1| Tetratricopeptide TPR_1 repeat-containing protein [Hippea maritima
           DSM 10411]
          Length = 260

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 1/237 (0%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           + L  +G     Q E E AI  F  A++ NPS  +A+   G   A L    +A    +KA
Sbjct: 6   DVLFHKGELLVEQGECEKAIVYFLNAVKENPSFEDAYIEIGYCYAQLDNFDDAEDYCNKA 65

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV-KLDKENKSAYTYLGLALSSIGEYK 534
           +E  PN+ +  +   ++  KF  F   +E L+  + +LD+ + S Y  +G A   +GE  
Sbjct: 66  IEINPNNLEAYNTLAMIYHKFGFFEDEIEALNEIIIRLDEPDASIYLNIGNAYYELGEND 125

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           +A E +  AI ++ +F EA+ ++   Y       KA E  +Q L ID   S  Y   G++
Sbjct: 126 RAIEFYDMAIGMEPDFAEAYANMGNAYMAKDEYIKATEAYKQALQIDPNMSDVYLNLGIV 185

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
              LG + +A+K     + I+P N    Y     +  + E  +A+ +Y+   +L  D
Sbjct: 186 YGELGSYDEAVKYFEQSIRINPYNPSAHYNLGIIWVMLNEKEKALNEYERLKNLNKD 242



 Score = 40.0 bits (92), Expect = 7.2,   Method: Composition-based stats.
 Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 1/145 (0%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G  L   GE +KA    L A++ + +F +A+  +   Y  L N + A +   + + I+  
Sbjct: 12  GELLVEQGECEKAIVYFLNAVKENPSFEDAYIEIGYCYAQLDNFDDAEDYCNKAIEINPN 71

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGL-GIDPSNIECLYLRASCYHAIGEYREAIKDY 642
             +AY+   ++ H  G  +  I+ L+  +  +D  +        + Y+ +GE   AI+ Y
Sbjct: 72  NLEAYNTLAMIYHKFGFFEDEIEALNEIIIRLDEPDASIYLNIGNAYYELGENDRAIEFY 131

Query: 643 DAALDLELDSMEKFVLQCLAFYQKE 667
           D A+ +E D  E +     A+  K+
Sbjct: 132 DMAIGMEPDFAEAYANMGNAYMAKD 156



 Score = 39.7 bits (91), Expect = 8.6,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 55/131 (41%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+ G A    G+   AI  +D  +  +P + EA    G A   + E   A   + +A+Q 
Sbjct: 112 LNIGNAYYELGENDRAIEFYDMAIGMEPDFAEAYANMGNAYMAKDEYIKATEAYKQALQI 171

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+  + +   G     LG   EA++   +++   P +    +  GI+     +   A+ 
Sbjct: 172 DPNMSDVYLNLGIVYGELGSYDEAVKYFEQSIRINPYNPSAHYNLGIIWVMLNEKEKALN 231

Query: 505 DLSACVKLDKE 515
           +      L+K+
Sbjct: 232 EYERLKNLNKD 242


>gi|189184738|ref|YP_001938523.1| TPR repeat-containing protein 01_10 [Orientia tsutsugamushi str.
           Ikeda]
 gi|189181509|dbj|BAG41289.1| TPR repeat-containing protein 01_10 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 379

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GK   AI++ +  +K  P + EA I +G +       E A+ +F  AI+ N S  EA+  
Sbjct: 122 GKNEEAITLCNLAIKYKPNFSEAYINKGASLNDLGRYEEAMENFDVAIRYNSSYPEAYYN 181

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   LG   EAI+    A+++ PN ++  H +G+       F  A+E     +K D 
Sbjct: 182 KGIALMNLGSIQEAIESCDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYDP 241

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +  AY   G  L+ +  Y +A E+   AI++D N  +A+      ++ L   ++A++  
Sbjct: 242 NDLKAYNNKGYVLNLLKRYAEAMESCNLAIEIDPNCADAYCLKGMVFEKLGKHQEAIKNY 301

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +  +  F K Y  +G+ L  LGQ+  A ++    +  +P+ I
Sbjct: 302 DIAIKYNPNFDKNYLEKGISLVNLGQYSSAKENFLLAIKYNPNII 346



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/264 (21%), Positives = 135/264 (51%), Gaps = 5/264 (1%)

Query: 405 DQILKEDPMYPEALIGR-----GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           +Q +++D +   A++ +     G++    ++ + AI +F  AI+ +PS   ++  +G A 
Sbjct: 25  EQSIQQDLIQDRAILAKEYFNIGSSFLKLKKYQEAIENFDIAIKYDPSYASSYNSKGIAL 84

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             LG+ +EA+++ + A++++P+     + + +   K      A+   +  +K       A
Sbjct: 85  DDLGKPLEAVENFNLAIKYDPSFVGAYNNKAMSYRKLGKNEEAITLCNLAIKYKPNFSEA 144

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   G +L+ +G Y++A E    AI+ + ++ EA+ +      +L + ++A+E     + 
Sbjct: 145 YINKGASLNDLGRYEEAMENFDVAIRYNSSYPEAYYNKGIALMNLGSIQEAIESCDIAIK 204

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
               +S+AYH +GL L  LGQ + AI+     +  DP++++    +    + +  Y EA+
Sbjct: 205 YRPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYDPNDLKAYNNKGYVLNLLKRYAEAM 264

Query: 640 KDYDAALDLELDSMEKFVLQCLAF 663
           +  + A++++ +  + + L+ + F
Sbjct: 265 ESCNLAIEIDPNCADAYCLKGMVF 288



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 1/200 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GIA +N G    AI   D  +K  P Y EA   +G   A   + + AI  F  AI+ +
Sbjct: 181 NKGIALMNLGSIQEAIESCDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYD 240

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +A+  +G     L    EA++  + A+E +PN AD    +G+V  K      A+++
Sbjct: 241 PNDLKAYNNKGYVLNLLKRYAEAMESCNLAIEIDPNCADAYCLKGMVFEKLGKHQEAIKN 300

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K +      Y   G++L ++G+Y  A+E  L AI+ + N +     + +    L 
Sbjct: 301 YDIAIKYNPNFDKNYLEKGISLVNLGQYSSAKENFLLAIKYNPNIISEHETMLKRLTKLK 360

Query: 566 NSEKALECLQQVLYIDKRFS 585
           N     E  +Q L I K++S
Sbjct: 361 NFTGVKE-YEQKLQILKKYS 379



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 10/104 (9%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDI---CNRAFCYSQLELHKHVIRDCDKALQLDPTL 102
           L  L  +  AI   D  LA  Y+  D+    N+ +  + L+ +   +  C+ A+++DP  
Sbjct: 220 LAILGQFQNAIEHFD--LAIKYDPNDLKAYNNKGYVLNLLKRYAEAMESCNLAIEIDPNC 277

Query: 103 LQAYILKGCAFSALGRKEEALSVWEKGYEHALHQSADL-KQFLE 145
             AY LKG  F  LG+ +EA+    K Y+ A+  + +  K +LE
Sbjct: 278 ADAYCLKGMVFEKLGKHQEAI----KNYDIAIKYNPNFDKNYLE 317



 Score = 43.5 bits (101), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 11/121 (9%)

Query: 12  RLNKTHKTICEIDELVRVDSVMASAITARI----ELAK-LCSLRNWSKAIRILDSLLAQS 66
           +L K  + I   D  ++ D   AS+  ++     +L K L ++ N++ AI+  D     +
Sbjct: 52  KLKKYQEAIENFDIAIKYDPSYASSYNSKGIALDDLGKPLEAVENFNLAIK-YDPSFVGA 110

Query: 67  YEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVW 126
           Y      N+A  Y +L  ++  I  C+ A++  P   +AYI KG + + LGR EEA+  +
Sbjct: 111 YN-----NKAMSYRKLGKNEEAITLCNLAIKYKPNFSEAYINKGASLNDLGRYEEAMENF 165

Query: 127 E 127
           +
Sbjct: 166 D 166


>gi|427738890|ref|YP_007058434.1| hypothetical protein Riv7116_5517 [Rivularia sp. PCC 7116]
 gi|427373931|gb|AFY57887.1| TPR repeat-containing protein [Rivularia sp. PCC 7116]
          Length = 555

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 124/252 (49%), Gaps = 22/252 (8%)

Query: 427 FQREL-EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           F ++L +AAI ++++A++ + S   ++ +RG A   L    +AI D ++A+   PN A  
Sbjct: 249 FNKKLYDAAIENYSQALEIHKSDANSYYKRGNAFYCLKNYSQAIADFTQAVNINPNFAKA 308

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
             + G+  ++  D+  A+ED +  ++++  +  A+     A S IG+ + A E + +A +
Sbjct: 309 YIKSGLTRYELADYYGAIEDYTQAIRINSYDAVAFQNRADARSMIGDSQGAIEDYTQAGK 368

Query: 546 LDRNFLEAWGHLTQFYQDL--------------------ANSEKALECLQQVLYIDKRFS 585
           ++ + LE    L    ++L                     N ++A+E   QV+ I    +
Sbjct: 369 INPHLLETQ-RLESQQKNLNIEENSHNSTTDNNKDNLERENHQRAIEVFTQVIEISPDDA 427

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
             Y  RG     LG +  AI+D +  +GI+P + +  + R + ++ +G   EAI+DY  A
Sbjct: 428 VGYKKRGNARCDLGDYLPAIEDFTKAIGINPYDGDAYFYRGNSFYELGNKPEAIEDYTQA 487

Query: 646 LDLELDSMEKFV 657
           + +  +  + ++
Sbjct: 488 IQINPNDADAYI 499



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 33/274 (12%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y+ AI+ F Q +  +P + +A I  G  R    +   AI D+T+AI+ N     A++ R 
Sbjct: 288 YSQAIADFTQAVNINPNFAKAYIKSGLTRYELADYYGAIEDYTQAIRINSYDAVAFQNRA 347

Query: 457 QARAALGESVEAIQDLSKA-------------------LEFEPNSADILHERGIVNFKFK 497
            AR+ +G+S  AI+D ++A                   L  E NS +   +    N + +
Sbjct: 348 DARSMIGDSQGAIEDYTQAGKINPHLLETQRLESQQKNLNIEENSHNSTTDNNKDNLERE 407

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           +   A+E  +  +++  ++   Y   G A   +G+Y  A E   KAI ++    +A+ + 
Sbjct: 408 NHQRAIEVFTQVIEISPDDAVGYKKRGNARCDLGDYLPAIEDFTKAIGINPYDGDAYFYR 467

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              + +L N  +A+E   Q + I+   + AY  RG +   LG  + AI D          
Sbjct: 468 GNSFYELGNKPEAIEDYTQAIQINPNDADAYINRGKVRDELGDTQGAIADFQ-------- 519

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
                 + A  Y   G+  E     +  LDLE++
Sbjct: 520 ------IAADLYQKAGKVHEHKDTKEKILDLEIE 547


>gi|73667569|ref|YP_303584.1| hypothetical protein Mbar_A0011 [Methanosarcina barkeri str. Fusaro]
 gi|72394731|gb|AAZ69004.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 1138

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 130/280 (46%), Gaps = 5/280 (1%)

Query: 382  DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
            D  L +G+A  N  +Y  AIS + ++L  +P   EAL  R  A +   +   A++D+   
Sbjct: 755  DALLGKGLALSNLSRYDEAISCYTKLLNSEPENLEALRSRAFALSKSNKSNDALADYDRI 814

Query: 442  IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
            I+  P   +    +     ALG   E      + LE  PN+ +I++++G       DF  
Sbjct: 815  IKLQPENSQILAEKASLLEALGRYEETAACYERMLEISPNNREIIYKQGKALENSGDFEG 874

Query: 502  AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            AV      ++LD  N  AY   G  L  + +Y++A + + KA++   + + AW      Y
Sbjct: 875  AVGCYDRILELDPGNVGAYNNKGFVLYKLEKYQQAIDCYDKALEYSPDNVTAWYFQGCTY 934

Query: 562  QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
              L++++ AL C  + + +      A++ +G + + +G+ ++A+    + L I P++   
Sbjct: 935  LTLSSNKAALNCFNKTVQLKPDCITAWYNKGYIHNMMGETEEAVSCYDNVLAISPNSPSA 994

Query: 622  LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
            LY +    + + +  EA     AA   +LD ++   +  L
Sbjct: 995  LYNKRFALYTLKKLDEA-----AACKAKLDEIDPGFVDAL 1029



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 143/304 (47%), Gaps = 17/304 (5%)

Query: 395  GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
            GK   A+S +DQ+L  +    +AL+G+G A +     + AIS +T+ + S P   EA + 
Sbjct: 734  GKLEEAVSYYDQLLTLNSSNSDALLGKGLALSNLSRYDEAISCYTKLLNSEPENLEALRS 793

Query: 455  RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC----V 510
            R  A +   +S +A+ D  + ++ +P ++ IL E+  +      +    E+ +AC    +
Sbjct: 794  RAFALSKSNKSNDALADYDRIIKLQPENSQILAEKASLLEALGRY----EETAACYERML 849

Query: 511  KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
            ++   N+      G AL + G+++ A   + + ++LD   + A+ +       L   ++A
Sbjct: 850  EISPNNREIIYKQGKALENSGDFEGAVGCYDRILELDPGNVGAYNNKGFVLYKLEKYQQA 909

Query: 571  LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
            ++C  + L        A++ +G     L  +K A+   +  + + P  I   Y +   ++
Sbjct: 910  IDCYDKALEYSPDNVTAWYFQGCTYLTLSSNKAALNCFNKTVQLKPDCITAWYNKGYIHN 969

Query: 631  AIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN-SEFCWFDIDGDI 689
             +GE  EA+  YD  L +  +S         A Y K  ALYT  K++ +  C   +D +I
Sbjct: 970  MMGETEEAVSCYDNVLAISPNSPS-------ALYNKRFALYTLKKLDEAAACKAKLD-EI 1021

Query: 690  DPLF 693
            DP F
Sbjct: 1022 DPGF 1025



 Score = 83.2 bits (204), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 118/261 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G +    GK   A++ +++ L   P+ PE    +G           AI+ + ++  +N 
Sbjct: 110 KGCSLAELGKNDQAVNCYEKALSTFPVSPENWYNKGNKHLELNNYVEAINFYDKSFAANT 169

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                W R+  A   LG   E++    K++E   NS+  L  +G+     + +  A+E L
Sbjct: 170 YLSTVWYRKALASEQLGLDQESLNSYDKSIELNSNSSSSLQMQGMAYLGLEKYPEAIEYL 229

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            + + +  +N       G+ L   G+Y+ A + + KAI  + + + AW +     + +  
Sbjct: 230 DSALNITPDNAELLYQKGVVLDKSGDYETAIDCYDKAISFNPDLVNAWHNKGVNLEKMGI 289

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            ++AL C + VL  +         +G+ L  LG++ +A++     L  DP + E  Y + 
Sbjct: 290 YDEALTCYEFVLLSEPENLDVLQRKGVCLEKLGRNDEALQCYDEVLVYDPGSSEAWYSKG 349

Query: 627 SCYHAIGEYREAIKDYDAALD 647
           S  +  G+Y  AI  YD AL+
Sbjct: 350 SLLNKTGQYDAAIACYDKALN 370



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 140/350 (40%), Gaps = 42/350 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+A +   KY  AI   D  L   P   E L  +G       + E AI  + +AI  NP
Sbjct: 212 QGMAYLGLEKYPEAIEYLDSALNITPDNAELLYQKGVVLDKSGDYETAIDCYDKAISFNP 271

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               AW  +G     +G   EA+      L  EP + D+L  +G+   K    + A++  
Sbjct: 272 DLVNAWHNKGVNLEKMGIYDEALTCYEFVLLSEPENLDVLQRKGVCLEKLGRNDEALQCY 331

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR---------------NFL 551
              +  D  +  A+   G  L+  G+Y  A   + KA+  D                N  
Sbjct: 332 DEVLVYDPGSSEAWYSKGSLLNKTGQYDAAIACYDKALNPDTGVQVEEIGSDSLEQLNVY 391

Query: 552 EA-------------------WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           EA                   W      +  L   E A+EC  +VL  +   +  ++L+G
Sbjct: 392 EAALPSYPENPEFKSSPTVKIWYEKALAFDKLEKYESAIECYDKVLETESGHAVVWYLKG 451

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD- 651
           L L  LG++++AI+     L +D    +  Y +      I +Y++A++ YD AL+++ + 
Sbjct: 452 LDLERLGRYEEAIECYGRALKLDSGYAKVWYRKGLDSSKIKDYKDAVESYDKALEIDENY 511

Query: 652 ----SMEKFVLQCLAFYQKEIALYT---ASKINSEFCWFDIDGDIDPLFK 694
               + + F L  L  Y+  +  Y     +  +S   W++    +D L K
Sbjct: 512 TLTWAGKAFALAKLGEYESSLTCYNKVLGAVPSSAVAWYNKGLVLDELGK 561



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 4/233 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE--AIQ 443
           S+G      G+Y +AI+ +D+ L  D       IG  +        EAA+  + E    +
Sbjct: 347 SKGSLLNKTGQYDAAIACYDKALNPDTGVQVEEIGSDSLEQLNV-YEAALPSYPENPEFK 405

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
           S+P+  + W  +  A   L +   AI+   K LE E   A + + +G+   +   +  A+
Sbjct: 406 SSPTV-KIWYEKALAFDKLEKYESAIECYDKVLETESGHAVVWYLKGLDLERLGRYEEAI 464

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           E     +KLD      +   GL  S I +YK A E++ KA+++D N+   W         
Sbjct: 465 ECYGRALKLDSGYAKVWYRKGLDSSKIKDYKDAVESYDKALEIDENYTLTWAGKAFALAK 524

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           L   E +L C  +VL      + A++ +GL+L  LG+H +A +  +  L IDP
Sbjct: 525 LGEYESSLTCYNKVLGAVPSSAVAWYNKGLVLDELGKHAEASECYNQTLLIDP 577



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/351 (20%), Positives = 154/351 (43%), Gaps = 28/351 (7%)

Query: 316 ASLNDSNTNSESYSKSSISDNKSSDSTES----RSKLSFKWDMLKETSNEAKRNKKF--- 368
           ++LN +  N+E   +  +  +KS D   +       +SF  D++    N+    +K    
Sbjct: 231 SALNITPDNAELLYQKGVVLDKSGDYETAIDCYDKAISFNPDLVNAWHNKGVNLEKMGIY 290

Query: 369 -----CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGT 423
                C   +  S+  ++D    +G+     G+   A+  +D++L  DP   EA   +G+
Sbjct: 291 DEALTCYEFVLLSEPENLDVLQRKGVCLEKLGRNDEALQCYDEVLVYDPGSSEAWYSKGS 350

Query: 424 ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
                 + +AAI+ + +A+  NP  G   +  G       +S+E +     AL   P + 
Sbjct: 351 LLNKTGQYDAAIACYDKAL--NPDTGVQVEEIGS------DSLEQLNVYEAALPSYPENP 402

Query: 484 D--------ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           +        I +E+ +   K + + +A+E     ++ +  +   +   GL L  +G Y++
Sbjct: 403 EFKSSPTVKIWYEKALAFDKLEKYESAIECYDKVLETESGHAVVWYLKGLDLERLGRYEE 462

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A E + +A++LD  + + W         + + + A+E   + L ID+ ++  +  +   L
Sbjct: 463 AIECYGRALKLDSGYAKVWYRKGLDSSKIKDYKDAVESYDKALEIDENYTLTWAGKAFAL 522

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
             LG+++ ++   +  LG  PS+    Y +      +G++ EA + Y+  L
Sbjct: 523 AKLGEYESSLTCYNKVLGAVPSSAVAWYNKGLVLDELGKHAEASECYNQTL 573



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 5/271 (1%)

Query: 406 QILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGES 465
            +   D  Y  A  G+ +        + A++ +   +  NP+  EAW  +G     L  S
Sbjct: 643 NLFSPDISYDAAWYGKASIYGKLGMYDDALNSYDMVLAINPARAEAWYEKGSILDRLDRS 702

Query: 466 VEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
            EA++   KAL+ +P S+  L+              AV      + L+  N  A    GL
Sbjct: 703 EEALECYRKALDLDPQSSTALYGIASTTGDLGKLEEAVSYYDQLLTLNSSNSDALLGKGL 762

Query: 526 ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           ALS++  Y +A   + K +  +   LEA             S  AL    +++ +    S
Sbjct: 763 ALSNLSRYDEAISCYTKLLNSEPENLEALRSRAFALSKSNKSNDALADYDRIIKLQPENS 822

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
           +    +  LL  LG++++        L I P+N E +Y +       G++  A+  YD  
Sbjct: 823 QILAEKASLLEALGRYEETAACYERMLEISPNNREIIYKQGKALENSGDFEGAVGCYDRI 882

Query: 646 LDLELDSM-----EKFVLQCLAFYQKEIALY 671
           L+L+  ++     + FVL  L  YQ+ I  Y
Sbjct: 883 LELDPGNVGAYNNKGFVLYKLEKYQQAIDCY 913



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 104/264 (39%), Gaps = 34/264 (12%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A+  + + L  DP    AL G  +      +LE A+S + + +  N S  +A   +G A 
Sbjct: 705 ALECYRKALDLDPQSSTALYGIASTTGDLGKLEEAVSYYDQLLTLNSSNSDALLGKGLAL 764

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
           + L    EAI   +K L  EP + + L  R     K    N A+ D    +KL  EN   
Sbjct: 765 SNLSRYDEAISCYTKLLNSEPENLEALRSRAFALSKSNKSNDALADYDRIIKLQPENSQI 824

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
                  L ++G Y++    + + +++  N  E      +  ++  + E A+ C  ++L 
Sbjct: 825 LAEKASLLEALGRYEETAACYERMLEISPNNREIIYKQGKALENSGDFEGAVGCYDRILE 884

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           +D     AY+ +G +L+ L +                                  Y++AI
Sbjct: 885 LDPGNVGAYNNKGFVLYKLEK----------------------------------YQQAI 910

Query: 640 KDYDAALDLELDSMEKFVLQCLAF 663
             YD AL+   D++  +  Q   +
Sbjct: 911 DCYDKALEYSPDNVTAWYFQGCTY 934



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 76/354 (21%), Positives = 142/354 (40%), Gaps = 44/354 (12%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  ++ +++S        +G+     G+Y  AI  + + LK D  Y +    +G   +  
Sbjct: 432 CYDKVLETESGHAVVWYLKGLDLERLGRYEEAIECYGRALKLDSGYAKVWYRKGLDSSKI 491

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++ + A+  + +A++ + +    W  +  A A LGE   ++   +K L   P+SA   + 
Sbjct: 492 KDYKDAVESYDKALEIDENYTLTWAGKAFALAKLGEYESSLTCYNKVLGAVPSSAVAWYN 551

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS------IGEYKKAEEAHLK 542
           +G+V  +      A E  +  + +D E  +A   L   +        I E+ K   A   
Sbjct: 552 KGLVLDELGKHAEASECYNQTLLIDPEYSAARFKLNKNMKQDSTEALISEHVKNNSADAN 611

Query: 543 AIQL--------------------------------DRNFLEAWGHLTQFYQDLANSEKA 570
             Q+                                D ++  AW      Y  L   + A
Sbjct: 612 PAQMLSGGFWAYLLNYEYASSEDRDEPSEDLNLFSPDISYDAAWYGKASIYGKLGMYDDA 671

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           L     VL I+   ++A++ +G +L  L + ++A++     L +DP +   LY  AS   
Sbjct: 672 LNSYDMVLAINPARAEAWYEKGSILDRLDRSEEALECYRKALDLDPQSSTALYGIASTTG 731

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYTASKINSE 679
            +G+  EA+  YD  L L   + +  + + LA      Y + I+ YT   +NSE
Sbjct: 732 DLGKLEEAVSYYDQLLTLNSSNSDALLGKGLALSNLSRYDEAISCYT-KLLNSE 784


>gi|427730150|ref|YP_007076387.1| hypothetical protein Nos7524_2981 [Nostoc sp. PCC 7524]
 gi|427366069|gb|AFY48790.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
          Length = 280

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 58/190 (30%), Positives = 100/190 (52%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G  Q  +G   +AI+ ++Q L +DP Y  A   RG       + + AI+D+ EAI+   
Sbjct: 65  QGQKQHAQGNLQAAIASYNQALSQDPEYAAAYKARGLTYFDLGDKQKAIADYNEAIRLAA 124

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA+  RG ARA+LG+   AI D ++A+   PN A+  + RG       D + ++ED 
Sbjct: 125 NDAEAFNLRGNARASLGDQRGAITDYNEAIRLSPNYAEAYNNRGNALSVQGDKSGSIEDF 184

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++L+     AY   G A ++ G+ + A   + +AI+L+RNF  A+ +         +
Sbjct: 185 NQAIRLNPRYAIAYNNRGNARAAQGDLQGAISDYNQAIRLNRNFGPAYNNRGNARAAQGD 244

Query: 567 SEKALECLQQ 576
            + AL+ LQ+
Sbjct: 245 RQAALQDLQK 254



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 89/194 (45%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G  +  Q  L+AAI+ + +A+  +P    A+K RG     LG+  +AI D ++A+    
Sbjct: 65  QGQKQHAQGNLQAAIASYNQALSQDPEYAAAYKARGLTYFDLGDKQKAIADYNEAIRLAA 124

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A+  + RG       D   A+ D +  ++L      AY   G ALS  G+   + E  
Sbjct: 125 NDAEAFNLRGNARASLGDQRGAITDYNEAIRLSPNYAEAYNNRGNALSVQGDKSGSIEDF 184

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI+L+  +  A+ +         + + A+    Q + +++ F  AY+ RG      G 
Sbjct: 185 NQAIRLNPRYAIAYNNRGNARAAQGDLQGAISDYNQAIRLNRNFGPAYNNRGNARAAQGD 244

Query: 601 HKKAIKDLSSGLGI 614
            + A++DL     I
Sbjct: 245 RQAALQDLQKAADI 258



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 1/111 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A   +G  + +I  F+Q ++ +P Y  A   RG ARA Q +L+ AISD+ +AI+ N
Sbjct: 166 NRGNALSVQGDKSGSIEDFNQAIRLNPRYAIAYNNRGNARAAQGDLQGAISDYNQAIRLN 225

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFK 495
            + G A+  RG ARAA G+   A+QDL KA + F+  + + L+++ + N +
Sbjct: 226 RNFGPAYNNRGNARAAQGDRQAALQDLQKAADIFQKQNNNDLYQQVMNNIQ 276



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 79/158 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   + G    AI+ +++ ++      EA   RG ARA   +   AI+D+ EAI+ +
Sbjct: 98  ARGLTYFDLGDKQKAIADYNEAIRLAANDAEAFNLRGNARASLGDQRGAITDYNEAIRLS 157

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  EA+  RG A +  G+   +I+D ++A+   P  A   + RG       D   A+ D
Sbjct: 158 PNYAEAYNNRGNALSVQGDKSGSIEDFNQAIRLNPRYAIAYNNRGNARAAQGDLQGAISD 217

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
            +  ++L++    AY   G A ++ G+ + A +   KA
Sbjct: 218 YNQAIRLNRNFGPAYNNRGNARAAQGDRQAALQDLQKA 255



 Score = 67.4 bits (163), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 1/204 (0%)

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N  AG A+ + GQ + A G    AI   ++AL  +P  A     RG+  F   D   A+ 
Sbjct: 56  NSQAGSAYIQ-GQKQHAQGNLQAAIASYNQALSQDPEYAAAYKARGLTYFDLGDKQKAIA 114

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++L   +  A+   G A +S+G+ + A   + +AI+L  N+ EA+ +        
Sbjct: 115 DYNEAIRLAANDAEAFNLRGNARASLGDQRGAITDYNEAIRLSPNYAEAYNNRGNALSVQ 174

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            +   ++E   Q + ++ R++ AY+ RG      G  + AI D +  + ++ +       
Sbjct: 175 GDKSGSIEDFNQAIRLNPRYAIAYNNRGNARAAQGDLQGAISDYNQAIRLNRNFGPAYNN 234

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R +   A G+ + A++D   A D+
Sbjct: 235 RGNARAAQGDRQAALQDLQKAADI 258



 Score = 50.1 bits (118), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 46/92 (50%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N + A+    Q L  D  ++ AY  RGL    LG  +KAI D +  + +  ++ E   L
Sbjct: 73  GNLQAAIASYNQALSQDPEYAAAYKARGLTYFDLGDKQKAIADYNEAIRLAANDAEAFNL 132

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           R +   ++G+ R AI DY+ A+ L  +  E +
Sbjct: 133 RGNARASLGDQRGAITDYNEAIRLSPNYAEAY 164


>gi|425452168|ref|ZP_18831986.1| exported hypothetical protein [Microcystis aeruginosa PCC 7941]
 gi|389766142|emb|CCI08140.1| exported hypothetical protein [Microcystis aeruginosa PCC 7941]
          Length = 695

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 137/318 (43%), Gaps = 27/318 (8%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
              R+ +    +VD  L RGIA + + KY +AI+   +++K +P    A   RG AR + 
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + A+ D++ AI+ +P    A+  RG   A LGE  +AI D ++A+  +P+       
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY------LGLALSSIGEYKKAEEAHL- 541
           RG   +  KD+  A+ D +  +   + +   + Y       GL ++ I E   A +  L 
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNFLEYSGLGFQYRRHESGQGLIITKIFENSPAFKQGLI 440

Query: 542 -----KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK-------------- 582
                 AI       ++   L +   +  +SE   +   ++   D+              
Sbjct: 441 LDDLIIAINGKSTLNKSAEDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAV 500

Query: 583 -RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
            R +  Y  RG   + L  +K++I D +  +  +P        RA     +GE++EAIKD
Sbjct: 501 PRSASIYFGRGNARYYLKDYKESISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKD 560

Query: 642 YDAALDLELDSMEKFVLQ 659
            + A+ L       + L+
Sbjct: 561 LNQAISLNPKDARAYFLR 578



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 5/178 (2%)

Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           FD  L KE+   P +     GRG AR + ++ + +ISD+ EAI+ NP    A++ R  AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKESISDYNEAIKRNPKYAAAYRERADAR 548

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKS 518
             LGE  EAI+DL++A+   P  A     RG I + +FK +  A++D +  +  D + + 
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRR 608

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
           AY   GL    +G+ + A   H + I+L  ++  A+ +    Y+DL    KALE  ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+ GI++ N G Y  AI+ ++++L+  P   +A + RG A   Q + +AAI+D TE I+ 
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+  RG AR    ++  A++D S A+  +P  +   + RG V  +  ++  A+ 
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           D +  ++LD +   AY   G A  S+ +Y+ A   + +A+    NFLE  G   Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 35/208 (16%)

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+   P+A E     G ++A  G   EAI   ++ L+  PN+ D   +RGI   +   + 
Sbjct: 232 AVALQPTA-EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQ 290

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           AA+ D++  +KL+  N  AY + GLA                     R++ E        
Sbjct: 291 AAIADMTEVIKLNPNNSRAYFWRGLA---------------------RDYSE-------- 321

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
                +++ ALE     + +D  +S AY+ RG +   LG+++KAI D +  + +DP    
Sbjct: 322 -----DNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFL 376

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
               R    +++ +Y+ AI DY  AL+ 
Sbjct: 377 AYENRGDARYSLKDYQGAISDYTQALNF 404



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 13/176 (7%)

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           P SA I   RG   +  KD+  ++ D +  +K + +  +AY     A   +GE+++A + 
Sbjct: 501 PRSASIYFGRGNARYYLKDYKESISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKD 560

Query: 540 HLKAIQLDRN-----FLEAWGHLTQF--YQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
             +AI L+       FL  W H  +F  YQ+      AL+   Q +  D ++ +AY  RG
Sbjct: 561 LNQAISLNPKDARAYFLRGWIHSNRFKAYQE------ALKDYNQAILNDPQYRRAYFERG 614

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           L+   LG ++ AI D +  + + P      Y R   Y  +GE  +A++D+  A +L
Sbjct: 615 LIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 73/139 (52%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E L+  G ++A     E AI+ +   +Q +P+  +A+ +RG A     +   AI D+++ 
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           ++  PN++     RG+     +D   A+ED S  ++LD E   AY   G   + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359

Query: 536 AEEAHLKAIQLDRNFLEAW 554
           A   + +AI+LD +   A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I+  +S S+ F   RG A+     Y  +IS +++ +K +P Y  A   R  AR    E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKESISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
            AI D  +AI  NP    A+  RG   +   ++  EA++D ++A+  +P       ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRRAYFERGL 615

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           ++ +  D   A+ D +  ++L  +  +AY   GL+   +GE  KA E   KA +L
Sbjct: 616 IHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 5/155 (3%)

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
           LG++ ++ G Y++A  A+ + +Q+  N ++A+      Y +    + A+  + +V+ ++ 
Sbjct: 245 LGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNP 304

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
             S+AY  RGL       ++ A++D S  + +DP        R + Y  +GEY++AI DY
Sbjct: 305 NNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDY 364

Query: 643 DAALDLELDSMEKF-----VLQCLAFYQKEIALYT 672
             A+ L+ D    +         L  YQ  I+ YT
Sbjct: 365 TEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYT 399



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 132/313 (42%), Gaps = 42/313 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG      G+Y  AI  + + ++ DP    A   RG AR   ++ + AISD+T+A+   
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
             +G  ++ R   R   G+ +     ++K  E  P      IL +  I        N + 
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458

Query: 504 EDLSAC--------------------------VKLDKEN----KSAYTYLGL--ALSSIG 531
           EDL                             V L KEN    +SA  Y G   A   + 
Sbjct: 459 EDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYLK 518

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           +YK++   + +AI+ +  +  A+        +L   ++A++ L Q + ++ + ++AY LR
Sbjct: 519 DYKESISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARAYFLR 578

Query: 592 GLLL-HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           G +  +    +++A+KD +  +  DP      + R   +  +G+ R AI D+   + L  
Sbjct: 579 GWIHSNRFKAYQEALKDYNQAILNDPQYRRAYFERGLIHRELGDNRGAINDHTQVIRLVP 638

Query: 651 DSMEKFVLQCLAF 663
           D    +  + L++
Sbjct: 639 DWANAYYNRGLSY 651



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 1/122 (0%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWK 453
           G++  AI   +Q +  +P    A   RG   + + +  + A+ D+ +AI ++P    A+ 
Sbjct: 552 GEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRRAYF 611

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG     LG++  AI D ++ +   P+ A+  + RG+      +   A+ED     +L 
Sbjct: 612 ERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAELY 671

Query: 514 KE 515
           K+
Sbjct: 672 KQ 673


>gi|428307393|ref|YP_007144218.1| peptidase S1 and S6 chymotrypsin/Hap [Crinalium epipsammum PCC
           9333]
 gi|428248928|gb|AFZ14708.1| peptidase S1 and S6 chymotrypsin/Hap [Crinalium epipsammum PCC
           9333]
          Length = 445

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 3/178 (1%)

Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQI 407
           L    +    T+N  ++ +    T + +  +  VDF L  G+ +V +G +  AI+++D+ 
Sbjct: 209 LGIGINTFLATNNTFQKPQIISATAVEERGA--VDF-LRGGLDKVAKGDFNGAIALYDRA 265

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           +  +P   EA   RG AR+ Q++   AI+D+  AI  NP+  EA+  RG AR+   +   
Sbjct: 266 ISLNPNLAEAYNNRGLARSKQQDFTGAIADYDRAISLNPNLAEAYNNRGLARSKQQDFTG 325

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGL 525
           AI D  +A+   PN A+  + RG+     KDFN A+ D    + L+     AY   G 
Sbjct: 326 AIADYDRAISLNPNLAEAYNNRGLARSGQKDFNGAIADYDRAISLNPNLAEAYANRGF 383



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 63/127 (49%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +   AI+ +  AI  NP+  EA+  RG AR+   +   AI D  +A+   PN A+  + R
Sbjct: 254 DFNGAIALYDRAISLNPNLAEAYNNRGLARSKQQDFTGAIADYDRAISLNPNLAEAYNNR 313

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+   K +DF  A+ D    + L+     AY   GLA S   ++  A   + +AI L+ N
Sbjct: 314 GLARSKQQDFTGAIADYDRAISLNPNLAEAYNNRGLARSGQKDFNGAIADYDRAISLNPN 373

Query: 550 FLEAWGH 556
             EA+ +
Sbjct: 374 LAEAYAN 380



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 64/143 (44%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           + R G  + A G+   AI    +A+   PN A+  + RG+   K +DF  A+ D    + 
Sbjct: 242 FLRGGLDKVAKGDFNGAIALYDRAISLNPNLAEAYNNRGLARSKQQDFTGAIADYDRAIS 301

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           L+     AY   GLA S   ++  A   + +AI L+ N  EA+ +         +   A+
Sbjct: 302 LNPNLAEAYNNRGLARSKQQDFTGAIADYDRAISLNPNLAEAYNNRGLARSGQKDFNGAI 361

Query: 572 ECLQQVLYIDKRFSKAYHLRGLL 594
               + + ++   ++AY  RG +
Sbjct: 362 ADYDRAISLNPNLAEAYANRGFV 384


>gi|296446900|ref|ZP_06888836.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
 gi|296255575|gb|EFH02666.1| TPR repeat-containing protein [Methylosinus trichosporium OB3b]
          Length = 346

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 61/194 (31%), Positives = 95/194 (48%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G  A AI  +D +++  P   EA IGR  AR    +L+ AI+D+ +A+Q +  +  A  
Sbjct: 132 KGDVAGAIGDYDTLIEAQPKSTEAYIGRADARQSAGDLDRAIADYDKALQLDKKSAMALA 191

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG+A  A G+   A+ D   A++ EP SA  L +R        D + A+ D  A +  D
Sbjct: 192 NRGRAYKAKGDLDHALADFDAAVKLEPKSARALLDRAAFYQAKGDLDHALADYDAAIARD 251

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +   +Y   GLAL + G+Y KA     KAI+LD  +  A+ +     +     E A   
Sbjct: 252 GKQAVSYNNRGLALHAKGDYDKALADFSKAIELDPKYARAYLNRANALRGKHELEPAKAD 311

Query: 574 LQQVLYIDKRFSKA 587
           L+Q L +D   + A
Sbjct: 312 LEQALRLDPNLAAA 325



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 35/266 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR-ELEAAISDFTEAIQ 443
           ++RG A   +G Y  AI+ +D  L+ D     A +    A    + ++  AI D+   I+
Sbjct: 88  VNRGGAYHAKGDYDLAIADYDMALQMDRRAAAAALSARAAAKRAKGDVAGAIGDYDTLIE 147

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
           + P + EA+  R  AR + G+   AI D  KAL+ +  SA  L  RG       D + A+
Sbjct: 148 AQPKSTEAYIGRADARQSAGDLDRAIADYDKALQLDKKSAMALANRGRAYKAKGDLDHAL 207

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D  A VKL+ ++  A                          LDR           FYQ 
Sbjct: 208 ADFDAAVKLEPKSARAL-------------------------LDR---------AAFYQA 233

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
             + + AL      +  D + + +Y+ RGL LH  G + KA+ D S  + +DP       
Sbjct: 234 KGDLDHALADYDAAIARDGKQAVSYNNRGLALHAKGDYDKALADFSKAIELDPKYARAYL 293

Query: 624 LRASCYHAIGEYREAIKDYDAALDLE 649
            RA+      E   A  D + AL L+
Sbjct: 294 NRANALRGKHELEPAKADLEQALRLD 319



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/191 (27%), Positives = 86/191 (45%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S +  + R  A+ + G    AI+ +D+ L+ D     AL  RG A   + +L+ A++DF 
Sbjct: 152 STEAYIGRADARQSAGDLDRAIADYDKALQLDKKSAMALANRGRAYKAKGDLDHALADFD 211

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            A++  P +  A   R     A G+   A+ D   A+  +   A   + RG+      D+
Sbjct: 212 AAVKLEPKSARALLDRAAFYQAKGDLDHALADYDAAIARDGKQAVSYNNRGLALHAKGDY 271

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           + A+ D S  ++LD +   AY     AL    E + A+    +A++LD N   A   L  
Sbjct: 272 DKALADFSKAIELDPKYARAYLNRANALRGKHELEPAKADLEQALRLDPNLAAAKKALDD 331

Query: 560 FYQDLANSEKA 570
             + LAN   A
Sbjct: 332 VTKLLANRAVA 342


>gi|261216409|ref|ZP_05930690.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
 gi|260918016|gb|EEX84877.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
          Length = 295

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N A++D S  ++L+ +  +AY   G        Y++A                  
Sbjct: 126 YMGDNNKAMQDYSRAIQLNPQYDAAYIGRG------NVYRQA------------------ 161

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           GHL Q          AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 211

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 260



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 89/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 86  RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAMQDYSRAIQLNP 145

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+          H RG++         A+ED 
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 205

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 206 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 265

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 266 KAKAANSYARAVQLDPKYKPA 286



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A++DF +AI   
Sbjct: 119 NRALVDRYMGDNNKAMQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALR 178

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      D++ A +D
Sbjct: 179 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDD 238

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ +A+QLD  +  A
Sbjct: 239 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPA 286



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ D +  + L   +  AY
Sbjct: 126 YMGDNNKAMQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAY 185

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 186 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 245

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 246 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 281


>gi|371777955|ref|ZP_09484277.1| hypothetical protein AnHS1_11097 [Anaerophaga sp. HS1]
          Length = 707

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 34/277 (12%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K   ++V+  ++ GIA +   +Y  AI  +  +LK  P    A + RG A+   ++   A
Sbjct: 121 KVDPLNVNLLINLGIAYIQTEQYDKAIETYSDVLKLSPNLIRAYLNRGLAKFSAQDTSGA 180

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           + DF++AI  NP   + +  R   +    +   A+ D+++A++  P+ +     R I+ +
Sbjct: 181 LEDFSKAIDVNPYIPDGYVNRSMIQYYKSDFEGALSDINEAIKLRPDESSFYMNRAIIRY 240

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           +  D   A+ D    V ++  N   Y   G+  + IG+             LD       
Sbjct: 241 QLDDLRGAMADFDKFVAMEPRNALGYNNRGILRAEIGD-------------LD------- 280

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           G +  F + LA  E  L  L              + R +L    G+ +KA+ D +     
Sbjct: 281 GAIEDFSRVLALREDDLPTL--------------YYRAMLYKEKGEFEKALSDFNIVADA 326

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            P      Y RA    A+G++  A  DY+ A+ LE+D
Sbjct: 327 YPDFAPVYYNRAEVKQALGQFESAQLDYNTAMKLEMD 363



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 121/285 (42%), Gaps = 34/285 (11%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI  F+QI+K  P   E    R   + +  +   A++D  EA++ NP   +A+  RG
Sbjct: 41  YILAIQYFNQIIKAKPFLAEPYFYRALGKYYLEDFNGALNDCNEALKRNPYLVDAYNLRG 100

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                L +   ++ D  + L+ +P + ++L   GI   + + ++ A+E  S  +KL    
Sbjct: 101 ILYQKLNKPEASVTDFKQGLKVDPLNVNLLINLGIAYIQTEQYDKAIETYSDVLKLSPNL 160

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQ------------ 562
             AY   GLA  S  +   A E   KAI ++    + + +  + Q+Y+            
Sbjct: 161 IRAYLNRGLAKFSAQDTSGALEDFSKAIDVNPYIPDGYVNRSMIQYYKSDFEGALSDINE 220

Query: 563 --------------------DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
                                L +   A+    + + ++ R +  Y+ RG+L   +G   
Sbjct: 221 AIKLRPDESSFYMNRAIIRYQLDDLRGAMADFDKFVAMEPRNALGYNNRGILRAEIGDLD 280

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            AI+D S  L +   ++  LY RA  Y   GE+ +A+ D++   D
Sbjct: 281 GAIEDFSRVLALREDDLPTLYYRAMLYKEKGEFEKALSDFNIVAD 325



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 7/143 (4%)

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLA-----NSEKALECLQQVLY 579
           ++ IG      E ++ AIQ     ++A   L +  FY+ L      +   AL    + L 
Sbjct: 28  MTIIGRNALYFEDYILAIQYFNQIIKAKPFLAEPYFYRALGKYYLEDFNGALNDCNEALK 87

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
            +     AY+LRG+L   L + + ++ D   GL +DP N+  L      Y    +Y +AI
Sbjct: 88  RNPYLVDAYNLRGILYQKLNKPEASVTDFKQGLKVDPLNVNLLINLGIAYIQTEQYDKAI 147

Query: 640 KDYDAALDLELDSMEKFVLQCLA 662
           + Y   L L  + +  ++ + LA
Sbjct: 148 ETYSDVLKLSPNLIRAYLNRGLA 170



 Score = 40.0 bits (92), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 39/82 (47%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y   I+   ++ + +P +  A    G   +  +  + A+ ++T+AI+ N    EA+  RG
Sbjct: 601 YEMIITDLQKVAEINPNFEFAWFNLGYFNSLLKNFDKAVKNYTKAIEENNEFAEAYFNRG 660

Query: 457 QARAALGESVEAIQDLSKALEF 478
             R   G+  E   DLSKA E 
Sbjct: 661 LIRIYQGKKTEGTLDLSKAGEL 682


>gi|187779400|ref|ZP_02995873.1| hypothetical protein CLOSPO_02996 [Clostridium sporogenes ATCC
           15579]
 gi|187773025|gb|EDU36827.1| tetratricopeptide repeat protein [Clostridium sporogenes ATCC
           15579]
          Length = 268

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 34/221 (15%)

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +  +++  I  +T +I+  PS  +A+  R +    L E  ++I+D SK LE +P   D  
Sbjct: 51  YSSDIKEKIKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKDCY 110

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + R IV +  KD++ A++DL   V +DK  K+ Y   G+    I +YK+A     KAI  
Sbjct: 111 NNRAIVYYLIKDYDKALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAIEFTKAIHE 170

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           D                                   R S+AY  R    + L ++  +IK
Sbjct: 171 DS----------------------------------RDSEAYENRAFAYYNLKKYSPSIK 196

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           D ++ L + P N      R + Y+ +  Y  AI DY  AL+
Sbjct: 197 DYTNALKLKPENKNIYLNRGTMYYKMKSYENAISDYMKALN 237



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 80/168 (47%)

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           D    ++  +  +KL      AY         + EY K+ E + K ++LD    + + + 
Sbjct: 54  DIKEKIKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKDCYNNR 113

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              Y  + + +KAL+ L +++ IDK +   Y  RG++   +  +K+A  + +  +  D  
Sbjct: 114 AIVYYLIKDYDKALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAIEFTKAIHEDSR 173

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           + E    RA  Y+ + +Y  +IKDY  AL L+ ++   ++ +   +Y+
Sbjct: 174 DSEAYENRAFAYYNLKKYSPSIKDYTNALKLKPENKNIYLNRGTMYYK 221



 Score = 48.1 bits (113), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 4/156 (2%)

Query: 395 GKYAS----AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           G Y+S     I  +   +K  P + +A   R        E   +I D+++ ++ +P   +
Sbjct: 49  GYYSSDIKEKIKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKD 108

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
            +  R      + +  +A+QDL K +  + +  +I   RG+V  + +D+  A  + +  +
Sbjct: 109 CYNNRAIVYYLIKDYDKALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAIEFTKAI 168

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
             D  +  AY     A  ++ +Y  + + +  A++L
Sbjct: 169 HEDSRDSEAYENRAFAYYNLKKYSPSIKDYTNALKL 204



 Score = 46.2 bits (108), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 37/187 (19%), Positives = 77/187 (41%), Gaps = 1/187 (0%)

Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           S++ K   KF    I K K   +D   +R        +Y  +I  + +IL+ DP   +  
Sbjct: 52  SSDIKEKIKFYTISI-KLKPSFIDAYFNRAELYKELEEYNKSIEDYSKILELDPKDKDCY 110

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
             R       ++ + A+ D  + +  +      +  RG     + +   A  + +KA+  
Sbjct: 111 NNRAIVYYLIKDYDKALQDLDKLVSIDKHYKNIYFNRGMVFLEIEDYKRAAIEFTKAIHE 170

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           +   ++    R    +  K ++ +++D +  +KL  ENK+ Y   G     +  Y+ A  
Sbjct: 171 DSRDSEAYENRAFAYYNLKKYSPSIKDYTNALKLKPENKNIYLNRGTMYYKMKSYENAIS 230

Query: 539 AHLKAIQ 545
            ++KA+ 
Sbjct: 231 DYMKALN 237


>gi|209527065|ref|ZP_03275580.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|376006941|ref|ZP_09784148.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira sp. PCC 8005]
 gi|423064213|ref|ZP_17053003.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
 gi|209492493|gb|EDZ92833.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
 gi|375324682|emb|CCE19901.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira sp. PCC 8005]
 gi|406713456|gb|EKD08624.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
          Length = 581

 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 143/340 (42%), Gaps = 41/340 (12%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           + R  K +  + +    RG   +++ +Y  AI+ +D+ L+  P   +A+  RG A     
Sbjct: 209 LDRAVKLEPANYEAWFHRGEMLMSQHRYVDAIASYDKALELQPASFKAIFNRGIALQKLH 268

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
               AI+ + + IQ  P+  EAW  +G A  + G    A+  L +ALE  P S  I   R
Sbjct: 269 RYNDAIACYDQVIQLQPNDYEAWFYKGMALKS-GWPKTALLSLDRALEINPESPAIWIGR 327

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G      K++ +A+       +L+     A+    +AL  +  Y +A  A   A+Q+  N
Sbjct: 328 GQTLLDLKEYKSAIASFDRATQLNSNFPEAWLGRAVALFQLRRYPEAIIACDNALQVQPN 387

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYI------------------------DKRFS 585
           FLEAW       + L   E AL+   +V+                          D+   
Sbjct: 388 FLEAWNQRGLTLERLGRYEDALKAYDKVIQTTVLTLELADQVGLQRGMALELLKRDEEAV 447

Query: 586 KAYH--LR------------GLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
            AY   +R            G +L  LGQ+ +A+   S  + I P N +    + +    
Sbjct: 448 MAYRKLVRQKPDNFQAWVKLGQVLARLGQYVQAVDAFSEAIAIWPDNYQIWLEQGAILEK 507

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
           +  Y++AI  YD  + ++ D  E +V +  AF  ++IALY
Sbjct: 508 LDRYQDAIAAYDRLIKIKPDYWEAWVRRGQAF--EQIALY 545



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 124/302 (41%), Gaps = 35/302 (11%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+      +Y  AI+ FD+ L  +P   EA   RG A     + EAA + +  AI+  P
Sbjct: 124 RGMTLSKLERYEEAIASFDKALTMEPNNFEAWYERGLALEASLQFEAAAASYKRAIEIKP 183

Query: 447 SAG----------------------------------EAWKRRGQARAALGESVEAIQDL 472
           +                                    EAW  RG+   +    V+AI   
Sbjct: 184 NISALWYHQGNALMNDDRYSEAVASLDRAVKLEPANYEAWFHRGEMLMSQHRYVDAIASY 243

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            KALE +P S   +  RGI   K   +N A+      ++L   +  A+ Y G+AL S G 
Sbjct: 244 DKALELQPASFKAIFNRGIALQKLHRYNDAIACYDQVIQLQPNDYEAWFYKGMALKS-GW 302

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
            K A  +  +A++++      W    Q   DL   + A+    +   ++  F +A+  R 
Sbjct: 303 PKTALLSLDRALEINPESPAIWIGRGQTLLDLKEYKSAIASFDRATQLNSNFPEAWLGRA 362

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           + L  L ++ +AI    + L + P+ +E    R      +G Y +A+K YD  +   + +
Sbjct: 363 VALFQLRRYPEAIIACDNALQVQPNFLEAWNQRGLTLERLGRYEDALKAYDKVIQTTVLT 422

Query: 653 ME 654
           +E
Sbjct: 423 LE 424



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 125/285 (43%), Gaps = 7/285 (2%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  ++ + +    +    +G+A +  G   +A+   D+ L+ +P  P   IGRG      
Sbjct: 276 CYDQVIQLQPNDYEAWFYKGMA-LKSGWPKTALLSLDRALEINPESPAIWIGRGQTLLDL 334

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +E ++AI+ F  A Q N +  EAW  R  A   L    EAI     AL+ +PN  +  ++
Sbjct: 335 KEYKSAIASFDRATQLNSNFPEAWLGRAVALFQLRRYPEAIIACDNALQVQPNFLEAWNQ 394

Query: 489 RGIVNFKFKDFNAAVEDLSACVK-----LDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
           RG+   +   +  A++     ++     L+  ++      G+AL  +   ++A  A+ K 
Sbjct: 395 RGLTLERLGRYEDALKAYDKVIQTTVLTLELADQVGLQ-RGMALELLKRDEEAVMAYRKL 453

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
           ++   +  +AW  L Q    L    +A++   + + I     + +  +G +L  L +++ 
Sbjct: 454 VRQKPDNFQAWVKLGQVLARLGQYVQAVDAFSEAIAIWPDNYQIWLEQGAILEKLDRYQD 513

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           AI      + I P   E    R   +  I  Y+EA   Y  AL+L
Sbjct: 514 AIAAYDRLIKIKPDYWEAWVRRGQAFEQIALYQEAFNSYGIALEL 558



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 142/359 (39%), Gaps = 49/359 (13%)

Query: 383 FRLSRGIAQVNEG-------KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           F + +   + N+G       +Y  A+  +   +K  P    A +  G      ++ + A+
Sbjct: 45  FNIFKAFREYNQGNRLYKRERYDQALIHYQIAVKLKPDSWAAWLRLGNTLRKLKQYKQAL 104

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
             +  AI+  P     W  RG   + L    EAI    KAL  EPN+ +  +ERG+    
Sbjct: 105 GAYDRAIKLRPRNYWPWTFRGMTLSKLERYEEAIASFDKALTMEPNNFEAWYERGLALEA 164

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
              F AA       +++     + + + G AL +   Y +A  +  +A++L+    EAW 
Sbjct: 165 SLQFEAAAASYKRAIEIKPNISALWYHQGNALMNDDRYSEAVASLDRAVKLEPANYEAWF 224

Query: 556 HLTQF------YQD-LANSEKALE---------------------------CLQQVLYID 581
           H  +       Y D +A+ +KALE                           C  QV+ + 
Sbjct: 225 HRGEMLMSQHRYVDAIASYDKALELQPASFKAIFNRGIALQKLHRYNDAIACYDQVIQLQ 284

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
               +A+  +G+ L   G  K A+  L   L I+P +      R      + EY+ AI  
Sbjct: 285 PNDYEAWFYKGMALKS-GWPKTALLSLDRALEINPESPAIWIGRGQTLLDLKEYKSAIAS 343

Query: 642 YDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
           +D A  L  +  E ++ + +A +Q  +  Y  + I    C  D    + P F E W +R
Sbjct: 344 FDRATQLNSNFPEAWLGRAVALFQ--LRRYPEAIIA---C--DNALQVQPNFLEAWNQR 395



 Score = 43.5 bits (101), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 29/56 (51%)

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEK 128
             RA    QL  +   I  CD ALQ+ P  L+A+  +G     LGR E+AL  ++K
Sbjct: 359 LGRAVALFQLRRYPEAIIACDNALQVQPNFLEAWNQRGLTLERLGRYEDALKAYDK 414


>gi|225620729|ref|YP_002721987.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215549|gb|ACN84283.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 771

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 130/281 (46%), Gaps = 2/281 (0%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           E K+   I + D+ +++D     A   R       +  +  I +  ++I+ NP+  +A+ 
Sbjct: 15  EKKFTEIIKLCDEAIEKDDKDEYAYFIRANCYFDLKNYDMVIENLNKSIELNPNNEKAYF 74

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RG   + L    E+I D +K  E  PN       RG++    + +  A++D +  ++L+
Sbjct: 75  NRGFIESNLEMYEESINDYTKVTELNPNDEKAYFNRGLIKSNLEMYKEAIDDYTKVIELN 134

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
             N+ AY   G A S++  Y++A   ++  I+L+ N   A+ ++     DL   E+A+  
Sbjct: 135 PNNEIAYINRGFAKSNLEMYEEAIHDYINVIELNPNNKLAYINIGFTKSDLKMYEEAIYY 194

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             + + +D     +Y  RG     L  +++AIKD    + ++P++    + RA     + 
Sbjct: 195 FNKSIELDPNDKISYISRGFSKLNLKMYEEAIKDFDKVIELNPNDESAYFNRALSKLNLE 254

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTAS 674
            Y EAIKD+     +E ++  ++    + F Q  +  Y  S
Sbjct: 255 IYEEAIKDFTKV--IEANNKNEYAYLLIVFAQINLKKYRES 293



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 16/249 (6%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+ + N   Y  AI  + ++++ +P    A I RG A++     E AI D+   I+ 
Sbjct: 108 FNRGLIKSNLEMYKEAIDDYTKVIELNPNNEIAYINRGFAKSNLEMYEEAIHDYINVIEL 167

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+   G  ++ L    EAI   +K++E +PN       RG      K +  A++
Sbjct: 168 NPNNKLAYINIGFTKSDLKMYEEAIYYFNKSIELDPNDKISYISRGFSKLNLKMYEEAIK 227

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++L+  ++SAY    L+  ++  Y++A +   K I+ +      + +L   +  +
Sbjct: 228 DFDKVIELNPNDESAYFNRALSKLNLEIYEEAIKDFTKVIEANNK--NEYAYLLIVFAQI 285

Query: 565 ANSEKALECLQQVLYIDKRFSKA-----YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            N +K  E +    YIDK          Y+LR L    LG++ +AI D+++ + +D    
Sbjct: 286 -NLKKYRESIN---YIDKAIELNNNRYWYYLRFLSKINLGKYNEAINDINNFIQLDK--- 338

Query: 620 ECLYLRASC 628
             ++L+  C
Sbjct: 339 --IHLKIPC 345



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 125/265 (47%), Gaps = 1/265 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG  + N   Y  +I+ + ++ + +P   +A   RG  ++     + AI D+T+ I+ 
Sbjct: 74  FNRGFIESNLEMYEESINDYTKVTELNPNDEKAYFNRGLIKSNLEMYKEAIDDYTKVIEL 133

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+  RG A++ L    EAI D    +E  PN+       G      K +  A+ 
Sbjct: 134 NPNNEIAYINRGFAKSNLEMYEEAIHDYINVIELNPNNKLAYINIGFTKSDLKMYEEAIY 193

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
             +  ++LD  +K +Y   G +  ++  Y++A +   K I+L+ N   A+ +      +L
Sbjct: 194 YFNKSIELDPNDKISYISRGFSKLNLKMYEEAIKDFDKVIELNPNDESAYFNRALSKLNL 253

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+A++   +V+  + +   AY L       L +++++I  +   + ++ +N    YL
Sbjct: 254 EIYEEAIKDFTKVIEANNKNEYAYLLIVFAQINLKKYRESINYIDKAIELN-NNRYWYYL 312

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           R      +G+Y EAI D +  + L+
Sbjct: 313 RFLSKINLGKYNEAINDINNFIQLD 337


>gi|119484402|ref|ZP_01619019.1| TPR repeat protein [Lyngbya sp. PCC 8106]
 gi|119457876|gb|EAW38999.1| TPR repeat protein [Lyngbya sp. PCC 8106]
          Length = 566

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 137/297 (46%), Gaps = 12/297 (4%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG   +N+ KY+ A++ +D+ L+  P   +    RG A   Q +   A++ + + IQ 
Sbjct: 208 FNRGEMLMNQYKYSEAVASYDRALQLQPKSYQGWFNRGIALQKQHKYAEAVASYEQVIQL 267

Query: 445 NPSAGEAWKRRGQA-RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            P   EAW  +G A ++   E+  A+  + + L+  P+S  +   RG +    + +++A+
Sbjct: 268 QPQDYEAWFYKGMALKSQWPEA--ALSSIDQTLQMNPDSPAVWISRGQILLDLQQYHSAI 325

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                  +++     A+   G+AL  +G+Y++A  A+  A+Q++ +FLE W    +  + 
Sbjct: 326 AAFDKATQINTNFPEAWLGRGIALCELGQYQEAIIAYDNALQIEPDFLEVWNCRGEALEQ 385

Query: 564 LANSEKALECLQQVLYIDKR----FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           L   E+A+    +VL +        ++A   RG  L  L ++ +AI      + + P N 
Sbjct: 386 LDRYEEAVIAYDKVLLLTSENQTLATQAGLQRGEALEKLERYSEAIVAYKKVVRLRPDNF 445

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDS-----MEKFVLQCLAFYQKEIALY 671
           E           + +Y  A + Y  A+ +  D+     M   VL+    YQ+ I  Y
Sbjct: 446 EAWIKLGQACEQVQQYSSAFEAYSQAIQIWPDNYTVRLMLGRVLEATHQYQQAINTY 502



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 114/260 (43%), Gaps = 4/260 (1%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           +A+S  DQ L+ +P  P   I RG      ++  +AI+ F +A Q N +  EAW  RG A
Sbjct: 289 AALSSIDQTLQMNPDSPAVWISRGQILLDLQQYHSAIAAFDKATQINTNFPEAWLGRGIA 348

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
              LG+  EAI     AL+ EP+  ++ + RG    +   +  AV      + L  EN++
Sbjct: 349 LCELGQYQEAIIAYDNALQIEPDFLEVWNCRGEALEQLDRYEEAVIAYDKVLLLTSENQT 408

Query: 519 AYTYLGL----ALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
             T  GL    AL  +  Y +A  A+ K ++L  +  EAW  L Q  + +     A E  
Sbjct: 409 LATQAGLQRGEALEKLERYSEAIVAYKKVVRLRPDNFEAWIKLGQACEQVQQYSSAFEAY 468

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + I         + G +L    Q+++AI      +   P   E    R   +  +  
Sbjct: 469 SQAIQIWPDNYTVRLMLGRVLEATHQYQQAINTYDRIIQRQPDCCEAWIRRGQTFEQLQR 528

Query: 635 YREAIKDYDAALDLELDSME 654
           Y EA   Y  AL+L+ +  E
Sbjct: 529 YPEAFASYGVALELKPNHSE 548



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 123/300 (41%), Gaps = 43/300 (14%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-----------TARAFQREL---- 431
           RGI      +Y  AI+ FD+ +K +P   EA   RG            A +++R +    
Sbjct: 108 RGITLSKLERYPEAIASFDKAIKIEPNNFEAWYERGLALESTFKFSAAAASYKRAIEIKP 167

Query: 432 -------------------EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDL 472
                              E+A+  +  A+Q  P   EAW  RG+      +  EA+   
Sbjct: 168 DMSAIWYHQGNALMNEERYESAVESYDRAVQLQPDNFEAWFNRGEMLMNQYKYSEAVASY 227

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
            +AL+ +P S      RGI   K   +  AV      ++L  ++  A+ Y G+AL S   
Sbjct: 228 DRALQLQPKSYQGWFNRGIALQKQHKYAEAVASYEQVIQLQPQDYEAWFYKGMALKS--- 284

Query: 533 YKKAEEAHLKAI----QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
             +  EA L +I    Q++ +    W    Q   DL     A+    +   I+  F +A+
Sbjct: 285 --QWPEAALSSIDQTLQMNPDSPAVWISRGQILLDLQQYHSAIAAFDKATQINTNFPEAW 342

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             RG+ L  LGQ+++AI    + L I+P  +E    R      +  Y EA+  YD  L L
Sbjct: 343 LGRGIALCELGQYQEAIIAYDNALQIEPDFLEVWNCRGEALEQLDRYEEAVIAYDKVLLL 402



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 132/293 (45%), Gaps = 11/293 (3%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           ++ +A   +DQ ++    +    + RG + R  QR  EA ++ +  AI+  P     W  
Sbjct: 49  RFEAAFYHYDQAIQYKSDWYAGWLRRGNSLRKLQRYKEA-LASYDRAIKIKPKDYWGWTF 107

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG   + L    EAI    KA++ EPN+ +  +ERG+       F+AA       +++  
Sbjct: 108 RGITLSKLERYPEAIASFDKAIKIEPNNFEAWYERGLALESTFKFSAAAASYKRAIEIKP 167

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +  + + + G AL +   Y+ A E++ +A+QL  +  EAW +  +   +     +A+   
Sbjct: 168 DMSAIWYHQGNALMNEERYESAVESYDRAVQLQPDNFEAWFNRGEMLMNQYKYSEAVASY 227

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L +  +  + +  RG+ L    ++ +A+      + + P + E  + +     +  +
Sbjct: 228 DRALQLQPKSYQGWFNRGIALQKQHKYAEAVASYEQVIQLQPQDYEAWFYKGMALKS--Q 285

Query: 635 YRE-AIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKINSEF 680
           + E A+   D  L +  DS   +     +L  L  Y   IA +  A++IN+ F
Sbjct: 286 WPEAALSSIDQTLQMNPDSPAVWISRGQILLDLQQYHSAIAAFDKATQINTNF 338



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 38/252 (15%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +SRG   ++  +Y SAI+ FD+  + +  +PEA +GRG A     + + AI  +  A+Q 
Sbjct: 309 ISRGQILLDLQQYHSAIAAFDKATQINTNFPEAWLGRGIALCELGQYQEAIIAYDNALQI 368

Query: 445 NPSAGEAWKRRGQARAAL-------------------------------GESVEAIQDLS 473
            P   E W  RG+A   L                               GE++E ++  S
Sbjct: 369 EPDFLEVWNCRGEALEQLDRYEEAVIAYDKVLLLTSENQTLATQAGLQRGEALEKLERYS 428

Query: 474 KAL-------EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           +A+          P++ +   + G    + + +++A E  S  +++  +N +    LG  
Sbjct: 429 EAIVAYKKVVRLRPDNFEAWIKLGQACEQVQQYSSAFEAYSQAIQIWPDNYTVRLMLGRV 488

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
           L +  +Y++A   + + IQ   +  EAW    Q ++ L    +A       L +    S+
Sbjct: 489 LEATHQYQQAINTYDRIIQRQPDCCEAWIRRGQTFEQLQRYPEAFASYGVALELKPNHSE 548

Query: 587 AYHLRGLLLHGL 598
           A   R  LL  L
Sbjct: 549 AIAKRNQLLVKL 560



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 2/119 (1%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           +L +   QV +  Y+SA   + Q ++  P      +  G       + + AI+ +   IQ
Sbjct: 450 KLGQACEQVQQ--YSSAFEAYSQAIQIWPDNYTVRLMLGRVLEATHQYQQAINTYDRIIQ 507

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
             P   EAW RRGQ    L    EA      ALE +PN ++ + +R  +  K +  N A
Sbjct: 508 RQPDCCEAWIRRGQTFEQLQRYPEAFASYGVALELKPNHSEAIAKRNQLLVKLQAGNGA 566


>gi|17158736|ref|NP_478247.1| hypothetical protein all7600 [Nostoc sp. PCC 7120]
 gi|17134685|dbj|BAB77243.1| all7600 [Nostoc sp. PCC 7120]
          Length = 225

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/151 (29%), Positives = 87/151 (57%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+ ++ +G +  AI+ F+ +++ +P + E    RG A++  R+  AAISDF  A++ N
Sbjct: 43  NQGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRGLAKSQLRDFSAAISDFNLALRLN 102

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG +   LG+  +AI D ++ ++ +PNS D  +  G+ +F+  +   A+ D
Sbjct: 103 PKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNSQDGYYNLGLAHFRQGNHQQAIAD 162

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
            +  ++++     AY   GLA  ++G+ K A
Sbjct: 163 FNKALQINPNLADAYGNRGLAQYALGDSKSA 193



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/171 (30%), Positives = 86/171 (50%), Gaps = 2/171 (1%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G  +  Q     AI+DF   +Q NP   E +  RG A++ L +   AI D + AL   P
Sbjct: 44  QGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRGLAKSQLRDFSAAISDFNLALRLNP 103

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
              D  + RGI   +  DF  A+ D +  VK+D  ++  Y  LGLA    G +++A    
Sbjct: 104 KHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNSQDGYYNLGLAHFRQGNHQQAIADF 163

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV--LYIDKRFSKAYH 589
            KA+Q++ N  +A+G+       L +S+ A+  LQQ   L++ +  ++AY 
Sbjct: 164 NKALQINPNLADAYGNRGLAQYALGDSKSAVTDLQQAAKLFLKQGDTQAYQ 214



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/126 (31%), Positives = 68/126 (53%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+     +++AIS F+  L+ +P + +A  GRG +     + + AI+DF + ++ +P
Sbjct: 78  RGLAKSQLRDFSAAISDFNLALRLNPKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDP 137

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           ++ + +   G A    G   +AI D +KAL+  PN AD    RG+  +   D  +AV DL
Sbjct: 138 NSQDGYYNLGLAHFRQGNHQQAIADFNKALQINPNLADAYGNRGLAQYALGDSKSAVTDL 197

Query: 507 SACVKL 512
               KL
Sbjct: 198 QQAAKL 203



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 86/178 (48%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           + AA+S     I    +  + +  +G  +   G    AI D +  ++  P   +    RG
Sbjct: 20  MPAAVSAREAQIPLKATNFQEYYNQGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRG 79

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +   + +DF+AA+ D +  ++L+ ++  AY   G++   +G+++KA     + +++D N 
Sbjct: 80  LAKSQLRDFSAAISDFNLALRLNPKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNS 139

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            + + +L   +    N ++A+    + L I+   + AY  RGL  + LG  K A+ DL
Sbjct: 140 QDGYYNLGLAHFRQGNHQQAIADFNKALQINPNLADAYGNRGLAQYALGDSKSAVTDL 197



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 77/164 (46%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + +G+   +  +FN A+ D ++ V+++      +   GLA S + ++  A      A++L
Sbjct: 42  YNQGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRGLAKSQLRDFSAAISDFNLALRL 101

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           +    +A+      Y +L + +KA+    Q + ID      Y+  GL     G H++AI 
Sbjct: 102 NPKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNSQDGYYNLGLAHFRQGNHQQAIA 161

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           D +  L I+P+  +    R    +A+G+ + A+ D   A  L L
Sbjct: 162 DFNKALQINPNLADAYGNRGLAQYALGDSKSAVTDLQQAAKLFL 205



 Score = 47.0 bits (110), Expect = 0.062,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 71/164 (43%)

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           AAV    A + L   N   Y   G+     G +  A       +Q++  F E +      
Sbjct: 22  AAVSAREAQIPLKATNFQEYYNQGVQKLEQGNFNGAIADFNSVVQMNPRFYEGFCLRGLA 81

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
              L +   A+      L ++ + + AY+ RG+    LG  +KAI D +  + IDP++ +
Sbjct: 82  KSQLRDFSAAISDFNLALRLNPKHTDAYNGRGISYVELGDFQKAIADFNQTVKIDPNSQD 141

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
             Y     +   G +++AI D++ AL +  +  + +  + LA Y
Sbjct: 142 GYYNLGLAHFRQGNHQQAIADFNKALQINPNLADAYGNRGLAQY 185


>gi|398814140|ref|ZP_10572823.1| tetratricopeptide repeat protein [Brevibacillus sp. BC25]
 gi|398037084|gb|EJL30286.1| tetratricopeptide repeat protein [Brevibacillus sp. BC25]
          Length = 731

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/262 (22%), Positives = 121/262 (46%), Gaps = 2/262 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+  V   ++  A   F Q+++ D  YPE    RG   +    L+ A+ D+ +AI+ +
Sbjct: 449 NKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAIKLS 508

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E +  R  A   LG+  +A+ D    L+ +P + D L  R  + ++ + F  A +D
Sbjct: 509 PPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKD 568

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               ++++ ++      LGL   S G   +A +    A+  DR  + AW +    Y ++ 
Sbjct: 569 AEFGLEIEPDHARLLCTLGLIEMSDGNNDQALKTFTAALNKDREMMAAWTNRAVLYYEMG 628

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI-DPSNIECLYL 624
             ++A+  L + + ++K  +  Y+ R  +    G+ + +I D +  L   D    +  Y 
Sbjct: 629 EYDRAIADLTEAIALEKNATVLYN-RAWVYEAQGEWQLSISDYTEALAFSDADEQDIYYR 687

Query: 625 RASCYHAIGEYREAIKDYDAAL 646
           R  C+  +G+     +D++  L
Sbjct: 688 RGLCFIKMGDRELGTEDWNKHL 709



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 103/229 (44%), Gaps = 1/229 (0%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L  +G      +  E A   F++ IQ + +  E +  RG   + +G   EA++D ++A++
Sbjct: 447 LHNKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAIK 506

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
             P   ++   R     +  D   A+ D    + +D EN          L  + +++ A 
Sbjct: 507 LSPPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMAR 566

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
           +     ++++ +       L        N+++AL+     L  D+    A+  R +L + 
Sbjct: 567 KDAEFGLEIEPDHARLLCTLGLIEMSDGNNDQALKTFTAALNKDREMMAAWTNRAVLYYE 626

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           +G++ +AI DL+  + ++  N   LY RA  Y A GE++ +I DY  AL
Sbjct: 627 MGEYDRAIADLTEAIALE-KNATVLYNRAWVYEAQGEWQLSISDYTEAL 674



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 109/251 (43%), Gaps = 13/251 (5%)

Query: 366 KKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           K+F     + S+ I +D     +   RG      G+   A+  ++Q +K  P +PE    
Sbjct: 458 KRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAIKLSPPFPEVYFN 517

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           R TA     ++E A++D+   +  +P   +    R      + +   A +D    LE EP
Sbjct: 518 RATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKDAEFGLEIEP 577

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           + A +L   G++     + + A++  +A +  D+E  +A+T   +    +GEY +A    
Sbjct: 578 DHARLLCTLGLIEMSDGNNDQALKTFTAALNKDREMMAAWTNRAVLYYEMGEYDRAIADL 637

Query: 541 LKAIQLDRN----FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
            +AI L++N    +  AW +  Q    L+ S+      + + + D      Y+ RGL   
Sbjct: 638 TEAIALEKNATVLYNRAWVYEAQGEWQLSISDYT----EALAFSDADEQDIYYRRGLCFI 693

Query: 597 GLGQHKKAIKD 607
            +G  +   +D
Sbjct: 694 KMGDRELGTED 704



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 82/181 (45%)

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
           +LH +G++    K F  A E  S  +++D      Y   G   S +G   +A E + +AI
Sbjct: 446 LLHNKGLIYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAI 505

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           +L   F E + +    +  L + EKA+     +L ID         R  LL+ + + + A
Sbjct: 506 KLSPPFPEVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMA 565

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            KD   GL I+P +   L        + G   +A+K + AAL+ + + M  +  + + +Y
Sbjct: 566 RKDAEFGLEIEPDHARLLCTLGLIEMSDGNNDQALKTFTAALNKDREMMAAWTNRAVLYY 625

Query: 665 Q 665
           +
Sbjct: 626 E 626



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 58/108 (53%)

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            Y  L   E+A E   QV+ ID  + + Y  RG L   +G+  +A++D +  + + P   
Sbjct: 453 IYVALKRFEEAAETFSQVIQIDSNYPEYYFDRGNLYSRMGRLDEALEDYNQAIKLSPPFP 512

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
           E  + RA+ ++ +G+  +A+ DYD  LD++ ++++  + +    YQ E
Sbjct: 513 EVYFNRATAFNRLGDVEKAMADYDYLLDIDPENLDGLLNRATLLYQVE 560


>gi|391232538|ref|ZP_10268744.1| tetratricopeptide repeat protein [Opitutaceae bacterium TAV1]
 gi|391222199|gb|EIQ00620.1| tetratricopeptide repeat protein [Opitutaceae bacterium TAV1]
          Length = 706

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 115/251 (45%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G +A AI+ +D+ LK  P   +A   RG +     + +AA+ DF+  I   P+  EAW 
Sbjct: 49  KGNHAGAIAAYDRALKLLPEEADAWYARGESHLALVKPDAALGDFSHVITLRPAMAEAWA 108

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RGQA  A+ +  EA +D ++ALE +P  A I  +RG ++    + +AA+ D    + L 
Sbjct: 109 ARGQAYLAMAKPDEAFRDFTQALELDPKQAGIREQRGRISLDRGELDAALADFDGALALS 168

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
                A+        + G+ + A  A+ +AI  D    +A+   T    +     +A   
Sbjct: 169 PGLALAHLGRARVFHARGDTQGAIAAYSEAIAADPLLADAFRGRTAMLLEEKRFGEAARD 228

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
           +   L +  R +  +  R  +    G  + A+ D++  L + P N   L  +A      G
Sbjct: 229 IDSALVLAPRDASLWLARARVWRATGFPENALVDIARSLELSPRNTAALVEQALALEDTG 288

Query: 634 EYREAIKDYDA 644
           +   A+++ DA
Sbjct: 289 DTAAALRNLDA 299



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 97/249 (38%), Gaps = 4/249 (1%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           ALI  G   A +     AI+ +  A++  P   +AW  RG++  AL +   A+ D S  +
Sbjct: 38  ALIEEGHELAAKGNHAGAIAAYDRALKLLPEEADAWYARGESHLALVKPDAALGDFSHVI 97

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
              P  A+    RG         + A  D +  ++LD +        G      GE   A
Sbjct: 98  TLRPAMAEAWAARGQAYLAMAKPDEAFRDFTQALELDPKQAGIREQRGRISLDRGELDAA 157

Query: 537 EEAHLKAIQLDRNFLEAWGHL--TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
                 A+ L      A  HL   + +    +++ A+    + +  D   + A+  R  +
Sbjct: 158 LADFDGALALSPGL--ALAHLGRARVFHARGDTQGAIAAYSEAIAADPLLADAFRGRTAM 215

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
           L    +  +A +D+ S L + P +      RA  + A G    A+ D   +L+L   +  
Sbjct: 216 LLEEKRFGEAARDIDSALVLAPRDASLWLARARVWRATGFPENALVDIARSLELSPRNTA 275

Query: 655 KFVLQCLAF 663
             V Q LA 
Sbjct: 276 ALVEQALAL 284



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 14/241 (5%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
            R  RG   ++ G+  +A++ FD  L   P    A +GR      + + + AI+ ++EAI
Sbjct: 140 IREQRGRISLDRGELDAALADFDGALALSPGLALAHLGRARVFHARGDTQGAIAAYSEAI 199

Query: 443 QSNPSAGEAWKRRGQARAALGESV--EAIQDLSKALEFEPNSADILHERGIVNFKFKDF- 499
            ++P   +A+  RG+    L E    EA +D+  AL   P  A +   R  V ++   F 
Sbjct: 200 AADPLLADAF--RGRTAMLLEEKRFGEAARDIDSALVLAPRDASLWLARARV-WRATGFP 256

Query: 500 -NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ---LDRNFLEAWG 555
            NA V D++  ++L   N +A     LAL   G+   A   +L A++    D NF  AW 
Sbjct: 257 ENALV-DIARSLELSPRNTAALVEQALALEDTGDTAAALR-NLDAVRKAAPDENF--AWL 312

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
              + Y  L    +    L   +    + ++A   RG     L +   A+ D  + L I+
Sbjct: 313 QTARIYGKLRRVAEIPPLLTPFIEAHPQDAEALSTRGSAWLDLDRLDSAVADFRAALAIN 372

Query: 616 P 616
           P
Sbjct: 373 P 373



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 1/114 (0%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P   I RG A      LE A++ + EA++++P   +A K  G     L    EA + LS 
Sbjct: 477 PVVQINRGEALHRLGRLEEAVTAYQEALRTDPGLADARKDLGLLLMELNRLDEADEQLSD 536

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           A +  PNS D  + RG+V     D+ AA++     +  D + K +Y +L L L+
Sbjct: 537 AGKLAPNSGDAPNLRGLVRLISADYPAAIDRFQEAID-DYKTKQSYVHLSLYLA 589



 Score = 43.5 bits (101), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 10/271 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A +   K   A   F Q L+ DP        RG     + EL+AA++DF  A+  +
Sbjct: 109 ARGQAYLAMAKPDEAFRDFTQALELDPKQAGIREQRGRISLDRGELDAALADFDGALALS 168

Query: 446 PSAGEAWKRRGQARA--ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
           P  G A    G+AR   A G++  AI   S+A+  +P  AD    R  +  + K F  A 
Sbjct: 169 P--GLALAHLGRARVFHARGDTQGAIAAYSEAIAADPLLADAFRGRTAMLLEEKRFGEAA 226

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D+ + + L   + S +        + G  + A     ++++L      A        +D
Sbjct: 227 RDIDSALVLAPRDASLWLARARVWRATGFPENALVDIARSLELSPRNTAALVEQALALED 286

Query: 564 LANSEKALECLQQV--LYIDKRFSKAYHLRGLLLHGLGQHKKAIKD-LSSGLGIDPSNIE 620
             ++  AL  L  V     D+ F+    L+   ++G  +    I   L+  +   P + E
Sbjct: 287 TGDTAAALRNLDAVRKAAPDENFA---WLQTARIYGKLRRVAEIPPLLTPFIEAHPQDAE 343

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            L  R S +  +     A+ D+ AAL +  D
Sbjct: 344 ALSTRGSAWLDLDRLDSAVADFRAALAINPD 374


>gi|158334579|ref|YP_001515751.1| hypothetical protein AM1_1406 [Acaryochloris marina MBIC11017]
 gi|158304820|gb|ABW26437.1| TPR domain protein [Acaryochloris marina MBIC11017]
          Length = 783

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 115/247 (46%), Gaps = 8/247 (3%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P+ALI R   RA   +L+ A+ DF EAI  NP+   A+  RG    +LG+   AI D S+
Sbjct: 30  PDALINRANKRATNGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAAIHDFSE 89

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A+E  P+  +   +RG    +  +F  A++D S  ++++     AY     + + +G++ 
Sbjct: 90  AIELLPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYCIKAYYKRADSRAELGDHP 149

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
            A     + I        A+     F       EKA+E     +  + R + AY  RG  
Sbjct: 150 GALTDFSQVILRLPKDANAYCQRGIFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYC 209

Query: 595 LHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA----ALDLEL 650
           L  +G+ +KA KD S  L  DP N +  Y RA   +A+G  +E   D  +    A D  L
Sbjct: 210 LAQMGEAEKASKDFSEALLHDP-NHQAAYTRA---YALGMLKETPVDVSSPSSTATDYPL 265

Query: 651 DSMEKFV 657
             +E+ V
Sbjct: 266 SLLEESV 272



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 121/282 (42%), Gaps = 16/282 (5%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  ++R   +   G    A+  FD+ +  +P    A   RG       + EAAI DF+EA
Sbjct: 31  DALINRANKRATNGDLDGALGDFDEAIALNPAKATAYFNRGFLFNSLGKFEAAIHDFSEA 90

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+  P   EA+ +RG +    GE   AIQD S+A+   P      ++R     +  D   
Sbjct: 91  IELLPDYDEAYFQRGNSYRQRGEFQRAIQDYSQAIRINPYCIKAYYKRADSRAELGDHPG 150

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+ D S  +    ++ +AY   G+ LS  GE +KA E    AI+ +    +A+ H     
Sbjct: 151 ALTDFSQVILRLPKDANAYCQRGIFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYCL 210

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             +  +EKA +   + L  D     AY       + LG  K+   D+SS     PS+   
Sbjct: 211 AQMGEAEKASKDFSEALLHDPNHQAAY----TRAYALGMLKETPVDVSS-----PSSTAT 261

Query: 622 LYLRASCYHAIGEYREAIKDYD-------AALDLELDSMEKF 656
            Y  +    ++    E ++D D       A + LE  SME F
Sbjct: 262 DYPLSLLEESVPVSVEPVEDSDGEQEPHPATVPLEPTSMEGF 303



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 2/218 (0%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G +  A++ F Q++   P    A   RG   +   ELE AI DFT AI+ NP   +A+  
Sbjct: 146 GDHPGALTDFSQVILRLPKDANAYCQRGIFLSQSGELEKAIEDFTSAIEHNPRLADAYFH 205

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG   A +GE+ +A +D S+AL  +PN     + R       K+    V   S+    D 
Sbjct: 206 RGYCLAQMGEAEKASKDFSEALLHDPNH-QAAYTRAYALGMLKETPVDVSSPSSTAT-DY 263

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
                   + +++  + +    +E H   + L+   +E +           + + A+   
Sbjct: 264 PLSLLEESVPVSVEPVEDSDGEQEPHPATVPLEPTSMEGFFERANNRIQRGDLDGAISDY 323

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            +++  D   S+AY+ RG  L  LG+ + A++DL+  +
Sbjct: 324 SKIIDTDPENSQAYYQRGQSLGALGESQAAMEDLNQAI 361



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 100/255 (39%), Gaps = 36/255 (14%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGI     G+   AI  F   ++ +P   +A   RG   A   E E A  DF+EA+  +P
Sbjct: 172 RGIFLSQSGELEKAIEDFTSAIEHNPRLADAYFHRGYCLAQMGEAEKASKDFSEALLHDP 231

Query: 447 SAGEAWKRRGQARAALGE--------------------------SVEAIQD-------LS 473
           +   A+ R   A   L E                          SVE ++D         
Sbjct: 232 NHQAAYTR-AYALGMLKETPVDVSSPSSTATDYPLSLLEESVPVSVEPVEDSDGEQEPHP 290

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
             +  EP S +   ER     +  D + A+ D S  +  D EN  AY   G +L ++GE 
Sbjct: 291 ATVPLEPTSMEGFFERANNRIQRGDLDGAISDYSKIIDTDPENSQAYYQRGQSLGALGES 350

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           + A E   +AI   R  + + G +  F  +L+ + + L+   + L     F+K + L G 
Sbjct: 351 QAAMEDLNQAIHWAR--VHSLGLMRDFSGELSTTLETLKQDLKELSYQSPFAKTHPLPGT 408

Query: 594 LLHGLGQHKKAIKDL 608
               + Q   +  D+
Sbjct: 409 AADQMQQADPSADDV 423



 Score = 47.4 bits (111), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 46/81 (56%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI+   + ++++P+  +A   RG +RA   +L+ AI D++  I+ +P   EA+ +R +  
Sbjct: 511 AIAQHTRAIEQNPLDADAFFNRGQSRALGGDLQGAIEDYSRTIRLDPHNREAYVKRARCL 570

Query: 460 AALGESVEAIQDLSKALEFEP 480
           +ALG+   A  DL+  +   P
Sbjct: 571 SALGDETAAQADLNHVIRQSP 591



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 44/81 (54%)

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           LE AI+  T AI+ NP   +A+  RGQ+RA  G+   AI+D S+ +  +P++ +   +R 
Sbjct: 508 LERAIAQHTRAIEQNPLDADAFFNRGQSRALGGDLQGAIEDYSRTIRLDPHNREAYVKRA 567

Query: 491 IVNFKFKDFNAAVEDLSACVK 511
                  D  AA  DL+  ++
Sbjct: 568 RCLSALGDETAAQADLNHVIR 588



 Score = 41.6 bits (96), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 34/70 (48%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AI   ++A+E  P  AD    RG       D   A+ED S  ++LD  N+ AY      L
Sbjct: 511 AIAQHTRAIEQNPLDADAFFNRGQSRALGGDLQGAIEDYSRTIRLDPHNREAYVKRARCL 570

Query: 528 SSIGEYKKAE 537
           S++G+   A+
Sbjct: 571 SALGDETAAQ 580


>gi|300726435|ref|ZP_07059883.1| tetratricopeptide repeat protein [Prevotella bryantii B14]
 gi|299776283|gb|EFI72845.1| tetratricopeptide repeat protein [Prevotella bryantii B14]
          Length = 666

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 127/310 (40%), Gaps = 45/310 (14%)

Query: 367 KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           ++ + RI  +  I++D++            Y  AI  F+  +   P   E    RG A+ 
Sbjct: 20  QYNIDRIQVAGRIALDYK-----------DYVLAIQHFNICVSYKPYLYEPWYYRGVAKF 68

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +  +   A  D TEAI+ NP   + W  R  +R    +  EAI D  +AL+ +PN+   +
Sbjct: 69  YLDDFSGAEMDETEAIKLNPYISDIWNLRALSRIKQDKFQEAISDYDQALKRDPNNRGYI 128

Query: 487 HERGIVNFKFKDFNAAVEDLSACV----------------------------------KL 512
             +     K KD+++A   L + V                                  ++
Sbjct: 129 FNKAYCAVKLKDYSSAHRQLDSIVARWPQMADAYSLQTEVYLTENDTATAAKWLDKTLEI 188

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           D  N  A+   G    S   YK A EA   AI  +   +  + +      +L    +A+E
Sbjct: 189 DPYNGDAWAIRGRLHLSRKSYKVAFEAFSNAIHYEPKVVNNYVYRAMASVNLNKLRQAME 248

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + + +D     A++ RGLL   LG   +AIKD    L ++P+NI+ LY RA      
Sbjct: 249 DYDKAVEMDPNNFIAHYNRGLLRLTLGDDNRAIKDFDFVLRLEPNNIQALYNRALLNDKT 308

Query: 633 GEYREAIKDY 642
           G  + AI+DY
Sbjct: 309 GNLKAAIRDY 318



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 69/159 (43%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           + E   A+A    D+ L+ DP   +A   RG     ++  + A   F+ AI   P     
Sbjct: 170 LTENDTATAAKWLDKTLEIDPYNGDAWAIRGRLHLSRKSYKVAFEAFSNAIHYEPKVVNN 229

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +  R  A   L +  +A++D  KA+E +PN+    + RG++     D N A++D    ++
Sbjct: 230 YVYRAMASVNLNKLRQAMEDYDKAVEMDPNNFIAHYNRGLLRLTLGDDNRAIKDFDFVLR 289

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           L+  N  A     L     G  K A   + + IQ   NF
Sbjct: 290 LEPNNIQALYNRALLNDKTGNLKAAIRDYSRVIQKFPNF 328



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 70/163 (42%), Gaps = 21/163 (12%)

Query: 365 NKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA 424
           N+K   TR +K   I+  F L R +AQ     Y  AIS  D  ++ D     A + R ++
Sbjct: 486 NEKISNTRDAK---IASSFLLQRAVAQATIHNYEEAISDLDDYIRMDSTNVLAFMQRASS 542

Query: 425 RAFQRELEA---------------AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
            A   EL+A                  D  +AI    +        G A AA+ +  +AI
Sbjct: 543 LA---ELDAYNRSQGRNSSMYTTRINDDLRQAIHLRKNNAYLLYNMGCAYAAIKDFNKAI 599

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
              S+A+   PN A+  + RG+   +  D  +AV+DLS   +L
Sbjct: 600 LYFSQAIGVNPNLAEAYYNRGLAKLRCNDVGSAVKDLSRAGEL 642


>gi|428768755|ref|YP_007160545.1| hypothetical protein Cyan10605_0355 [Cyanobacterium aponinum PCC
           10605]
 gi|428683034|gb|AFZ52501.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanobacterium
           aponinum PCC 10605]
          Length = 539

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 4/262 (1%)

Query: 346 SKLSFKWDMLKETSNEAKRNKK----FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAI 401
           S L  K+D LK+ S            +C  ++ K+ SI     L R IA+   G    A+
Sbjct: 206 SYLDQKYDYLKQASLHNNHGDYLSAIYCYDQVLKNNSIDYKVYLLRAIAKWKIGSQQGAL 265

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
           +  +Q +   P Y  A   RG  +   +  + AI D+TE I+ NP +  A+ RR      
Sbjct: 266 ADLNQAIIIYPKYDLAYHWRGYIKYKIQSYQEAIFDYTEEIKINPLSIYAYYRRALCYEK 325

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
               ++A +D S+ L    N     + RG + ++  D   A+ED    ++L+     AY 
Sbjct: 326 TNSLLKAFEDYSQVLILNNNLYQGFYNRGNIRYELGDKEGALEDYRKALQLNPSLAKAYY 385

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
            L +  + +GE  +A   +  AI L  N+++A+ +L   Y DL    +A+    +   +D
Sbjct: 386 NLAIIYNDLGEINQAIYNYKSAINLVPNYVKAYYNLAIIYVDLGKYRQAIIHYDKACELD 445

Query: 582 KRFSKAYHLRGLLLHGLGQHKK 603
             F +A + +  LL  L Q K+
Sbjct: 446 NEFIQAKYNKQFLLEYLRQEKQ 467



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 145/336 (43%), Gaps = 50/336 (14%)

Query: 342 TESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQV--------- 392
            +S+ K+ F   +   T N +KR  +F  +         + F L+  + Q          
Sbjct: 161 NKSQYKIIFAGFLPTYTLNISKRQNRFTFSFSHLLYMGGLKFYLTSYLDQKYDYLKQASL 220

Query: 393 --NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
             N G Y SAI  +DQ+LK + +  +  + R  A+                         
Sbjct: 221 HNNHGDYLSAIYCYDQVLKNNSIDYKVYLLRAIAK------------------------- 255

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
            WK        +G    A+ DL++A+   P      H RG + +K + +  A+ D +  +
Sbjct: 256 -WK--------IGSQQGALADLNQAIIIYPKYDLAYHWRGYIKYKIQSYQEAIFDYTEEI 306

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           K++  +  AY    L         KA E + + + L+ N  + + +      +L + E A
Sbjct: 307 KINPLSIYAYYRRALCYEKTNSLLKAFEDYSQVLILNNNLYQGFYNRGNIRYELGDKEGA 366

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           LE  ++ L ++   +KAY+   ++ + LG+  +AI +  S + + P+ ++  Y  A  Y 
Sbjct: 367 LEDYRKALQLNPSLAKAYYNLAIIYNDLGEINQAIYNYKSAINLVPNYVKAYYNLAIIYV 426

Query: 631 AIGEYREAIKDYDAALDLELDSME-----KFVLQCL 661
            +G+YR+AI  YD A +L+ + ++     +F+L+ L
Sbjct: 427 DLGKYRQAIIHYDKACELDNEFIQAKYNKQFLLEYL 462


>gi|254168890|ref|ZP_04875730.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
 gi|197622154|gb|EDY34729.1| Tetratricopeptide repeat family [Aciduliprofundum boonei T469]
          Length = 1297

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 14/295 (4%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++ G+A    G    A+  +    K DP    A        A Q+E + A     +A+Q 
Sbjct: 65  VNTGMALQKVGAIKDALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQI 124

Query: 445 NPSAGEAWKRRGQARAALGESVEA--------------IQDLSKALEFEPNSADILHERG 490
           +  + E W  + +     G+  EA              I+   K LE+ P   +IL ++G
Sbjct: 125 DRRSKEVWGTKAEIYQLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEILFKKG 184

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +  +K + +   V+ +   V ++ E++ A+ YLG A ++I   ++A  A  KAI++D N 
Sbjct: 185 VQLYKIQSYAECVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPND 244

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
            ++W +L   Y+     E+AL+C ++ + ID    K+++L   +LH L +  +A+K ++ 
Sbjct: 245 KKSWINLGILYKKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINR 304

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            L +D      L L+      +  Y E        LD+  +  E      L++Y 
Sbjct: 305 ALELDKKYESALLLKRDVAKKLKVYDELAAACVGLLDVGYEDTELMYDLALSYYH 359



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 36/309 (11%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
            +L + I +  +G++   ISI + ILK +P    +L+    A     +LE+A++    A 
Sbjct: 384 LKLQKEIMK-KKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESALNFAIRAT 442

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQ----------------DLSKA----------- 475
           +  PS  E WK R      L +  E I                 DL++A           
Sbjct: 443 EIEPSNIELWKLRKDIAKDLNKPQEIINAGTQIISMEGDFETYLDLARAYYIVSRYDDAK 502

Query: 476 ------LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
                 L+ + +S +  +  G++ +K  D   A         ++  NK  +  L   +  
Sbjct: 503 KTLERGLKLKEDSDEGWNLLGMIYYKLGDLENARYSFEKASTINPNNKKYWKNLAWVMEK 562

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +G+Y +A E + KA++LD N +  W       + +   E+A++     L ++  F+KA +
Sbjct: 563 LGKYNEAVEYYEKALELDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALY 622

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            +G  L  LG + +A+K  +S + ++  N E +Y RA       EY  A+KD + AL+ E
Sbjct: 623 EKGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYE 682

Query: 650 LDSMEKFVL 658
               EKF++
Sbjct: 683 --RKEKFLV 689



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 1/219 (0%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +LE A   F +A   NP+  + WK        LG+  EA++   KALE +PN   + +E+
Sbjct: 531 DLENARYSFEKASTINPNNKKYWKNLAWVMEKLGKYNEAVEYYEKALELDPNDMRLWYEK 590

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           GI   K K +  A++   + +KL+ E   A    G +L  +G Y +A +     I+L+R 
Sbjct: 591 GICLKKIKRYEEAIKSFDSALKLNSEFTKALYEKGDSLIKLGNYDEALKIFTSLIKLERG 650

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             E               E AL+ L   L  +++  K   L+  +   L  ++  I+   
Sbjct: 651 NSEYIYKRAYLRFKKREYEAALKDLNLALNYERK-EKFLVLKKDVCKELKDYECVIETSK 709

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             L I+  NI      A  Y ++G+   AI  Y  AL++
Sbjct: 710 EILTINKKNISAWRDLAVAYDSMGKVDSAIATYRDALEI 748



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 40/290 (13%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  A+  +++ L+ DP        +G      +  E AI  F  A++ N    +A   
Sbjct: 564 GKYNEAVEYYEKALELDPNDMRLWYEKGICLKKIKRYEEAIKSFDSALKLNSEFTKALYE 623

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G +   LG   EA++  +  ++ E  +++ +++R  + FK +++ AA++DL+  +  ++
Sbjct: 624 KGDSLIKLGNYDEALKIFTSLIKLERGNSEYIYKRAYLRFKKREYEAALKDLNLALNYER 683

Query: 515 ENKSAYTYLGLALSSIGEYKKAE---EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           + K    +L L      E K  E   E   + + +++  + AW  L   Y  +   + A+
Sbjct: 684 KEK----FLVLKKDVCKELKDYECVIETSKEILTINKKNISAWRDLAVAYDSMGKVDSAI 739

Query: 572 ECLQQVLYI-----------------DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL-- 612
              +  L I                   RF+ A  +   +L    +    ++DLSS L  
Sbjct: 740 ATYRDALEIFPDNDVLLYELKATLLKHNRFADAIDVCKKILSIAPEDYDNLRDLSSALIK 799

Query: 613 -------------GIDPS-NIECLYLRASCYHAIGEYREAIKDYDAALDL 648
                         ++ + N E L L    Y+ +  Y  AI+ Y  AL+L
Sbjct: 800 LKKYEDAKEYLLRALELNKNAELLELLGDTYYYLKNYTSAIEHYKDALNL 849



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 22/212 (10%)

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I  N   G+ + RR  +   + E++E I++     E E  SA +L   G+   K      
Sbjct: 28  INKNNPEGKDYLRR--SINLINENLELIKN-----ENESFSA-LLVNTGMALQKVGAIKD 79

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+E      KLD  N SAYT   + L+   EYKKA     KA+Q+DR   E WG   + Y
Sbjct: 80  ALEAYKLAKKLDPSNVSAYTNYAMLLALQKEYKKAAYIIEKALQIDRRSKEVWGTKAEIY 139

Query: 562 QDLANSEKALECLQQVL--------YIDKRFS------KAYHLRGLLLHGLGQHKKAIKD 607
           Q   + ++AL+  ++++        Y DK         +    +G+ L+ +  + + +K 
Sbjct: 140 QLKGDIDEALDVYKKLIKMYPDEIKYYDKYLEYRPKDLEILFKKGVQLYKIQSYAECVKI 199

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           +   + I+  + E      + Y  I   REAI
Sbjct: 200 MKKVVSINAEHQEAWVYLGAAYANIDRMREAI 231



 Score = 48.5 bits (114), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 60/286 (20%), Positives = 118/286 (41%), Gaps = 5/286 (1%)

Query: 354 MLKETSNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM 413
           ++K   +E K   K+   R    K + + F+  +G+       YA  + I  +++  +  
Sbjct: 155 LIKMYPDEIKYYDKYLEYR---PKDLEILFK--KGVQLYKIQSYAECVKIMKKVVSINAE 209

Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
           + EA +  G A A    +  AI+   +AI+ +P+  ++W   G      GE  EA++   
Sbjct: 210 HQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILYKKRGEYEEALKCFK 269

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           +A++ +PN     +    V    +  + A++ ++  ++LDK+ +SA          +  Y
Sbjct: 270 EAIKIDPNDKKSWYLEASVLHILERDSEALKSINRALELDKKYESALLLKRDVAKKLKVY 329

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
            +   A +  + +     E    L   Y      EKA      +L    R      L+  
Sbjct: 330 DELAAACVGLLDVGYEDTELMYDLALSYYHTGELEKAYNITLDILKSLPRHLPTLKLQKE 389

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           ++   GQ ++ I      L I+P++I  L   A  Y  +G+   A+
Sbjct: 390 IMKKKGQWERVISICEDILKIEPNDIGSLVDEAKAYREVGKLESAL 435



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 87/385 (22%), Positives = 146/385 (37%), Gaps = 83/385 (21%)

Query: 369 CVTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
           CV  + K  SI+ + +   +  G A  N  +   AI+   + +K DP   ++ I  G   
Sbjct: 196 CVKIMKKVVSINAEHQEAWVYLGAAYANIDRMREAINALKKAIKIDPNDKKSWINLGILY 255

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
             + E E A+  F EAI+ +P+  ++W         L    EA++ +++ALE +      
Sbjct: 256 KKRGEYEEALKCFKEAIKIDPNDKKSWYLEASVLHILERDSEALKSINRALELDKKYESA 315

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKL---DKENKSAYTYLGLALSSIGEYKKAEEA--- 539
           L  +  V  K K ++   E  +ACV L     E+      L L+    GE +KA      
Sbjct: 316 LLLKRDVAKKLKVYD---ELAAACVGLLDVGYEDTELMYDLALSYYHTGELEKAYNITLD 372

Query: 540 -------HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR-------FS 585
                  HL  ++L +  ++  G            E+ +   + +L I+          +
Sbjct: 373 ILKSLPRHLPTLKLQKEIMKKKGQW----------ERVISICEDILKIEPNDIGSLVDEA 422

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR-------------------- 625
           KAY   G L   L    +A +       I+PSNIE   LR                    
Sbjct: 423 KAYREVGKLESALNFAIRATE-------IEPSNIELWKLRKDIAKDLNKPQEIINAGTQI 475

Query: 626 -------------ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYT 672
                        A  Y+ +  Y +A K  +  L L+ DS E + L  + +Y+       
Sbjct: 476 ISMEGDFETYLDLARAYYIVSRYDDAKKTLERGLKLKEDSDEGWNLLGMIYYK------L 529

Query: 673 ASKINSEFCWFDIDGDIDPLFKEYW 697
               N+ +  F+    I+P  K+YW
Sbjct: 530 GDLENARYS-FEKASTINPNNKKYW 553


>gi|189461815|ref|ZP_03010600.1| hypothetical protein BACCOP_02481 [Bacteroides coprocola DSM 17136]
 gi|189431409|gb|EDV00394.1| tetratricopeptide repeat protein [Bacteroides coprocola DSM 17136]
          Length = 676

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 10/266 (3%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++N   Y  A +   + +K +P  P A   RG +R  Q + + AI D+ +A++ +P
Sbjct: 66  RGLAKMNLDDYQGAENDCTEAIKRNPFVPNAYQIRGISRIRQEKFKDAIQDYEKALKLDP 125

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                W      R    +   A  DL   +   P   D    R  V+ K KD   A+ D 
Sbjct: 126 ENISLWHNLALCRMREEDYALAKADLDTLIRIAPRYTDAYLMRTEVSLKQKDTLQAMTDA 185

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-----HLTQFY 561
              +++D+ N   +   G+      +Y  AE    +AI+L    + + G      L ++Y
Sbjct: 186 DRAIEMDRYNSDTWASRGMLFMQREKYADAETDLTEAIRLS---VRSAGLFINRALARYY 242

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           Q+  N   A++     L ID+     ++ RGLL   +G   +AI+D    L ++P N+  
Sbjct: 243 QN--NLRGAMQDYDFALDIDRNNFIGHYNRGLLRAQVGDDNRAIEDFDFVLKVEPDNMMA 300

Query: 622 LYLRASCYHAIGEYREAIKDYDAALD 647
           ++ R       G+Y  A++DY A +D
Sbjct: 301 IFNRGLLRDKTGDYSGAMEDYTAVID 326



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 2/164 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+  +   KYA A +   + ++         I R  AR +Q  L  A+ D+  A+  +
Sbjct: 201 SRGMLFMQREKYADAETDLTEAIRLSVRSAGLFINRALARYYQNNLRGAMQDYDFALDID 260

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +       RG  RA +G+   AI+D    L+ EP++   +  RG++  K  D++ A+ED
Sbjct: 261 RNNFIGHYNRGLLRAQVGDDNRAIEDFDFVLKVEPDNMMAIFNRGLLRDKTGDYSGAMED 320

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLD 547
            +A +       + Y Y   A   IG+ + A+E   K +  QLD
Sbjct: 321 YTAVIDEYPNFLTGYQYRAQARRKIGDLRGADEDEFKVLKAQLD 364



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 28/293 (9%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD +LK +P    A+  RG  R    +   A+ D+T  I   
Sbjct: 269 NRGLLRAQVGDDNRAIEDFDFVLKVEPDNMMAIFNRGLLRDKTGDYSGAMEDYTAVIDEY 328

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    ++ R QAR  +G+   A +D  K L+ + ++          N K      A  D
Sbjct: 329 PNFLTGYQYRAQARRKIGDLRGADEDEFKVLKAQLDAQ---------NGKTSQKQTASAD 379

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
                K DK N + Y  + +A  S  E  K +  +   +Q DRN       L Q    L 
Sbjct: 380 DKTRKKSDK-NMNNYRKIIVA-DSEDETTKYKTDYRGRVQ-DRNV----TILPQPMFALT 432

Query: 566 NSEKALECLQQV---LYIDKRFSK-AYHLRGLLLHG--------LGQHKKAIKDLSSGLG 613
             EK  E  +Q+    YID   ++    LR L+++         +  H  +I +++  + 
Sbjct: 433 YYEKGEEVKRQINYSKYIDDLNNRHVLPLRLLIINNETSLTEEQVKLHFASIDEVTEKIV 492

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            DP N+   Y RA+ ++ + ++  A+ D DAA++ +      + ++ L  Y++
Sbjct: 493 KDPDNVMHYYARATDFYLVQDFDNALSDLDAAIECDSTFFPAYFMRALIHYKQ 545



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 1/134 (0%)

Query: 427 FQRELEA-AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
            QRE  A A +D TEAI+ +  +   +  R  AR        A+QD   AL+ + N+   
Sbjct: 207 MQREKYADAETDLTEAIRLSVRSAGLFINRALARYYQNNLRGAMQDYDFALDIDRNNFIG 266

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG++  +  D N A+ED    +K++ +N  A    GL     G+Y  A E +   I 
Sbjct: 267 HYNRGLLRAQVGDDNRAIEDFDFVLKVEPDNMMAIFNRGLLRDKTGDYSGAMEDYTAVID 326

Query: 546 LDRNFLEAWGHLTQ 559
              NFL  + +  Q
Sbjct: 327 EYPNFLTGYQYRAQ 340



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%)

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           QV    YA+     D++++  P +  A   RG   A  ++  AA+ D+ +AI+ +    +
Sbjct: 568 QVRVLDYAAIRRDLDEVIRLAPDFTYAYYNRGNILAVMKDYHAALVDYNKAIELDSRFSD 627

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
           A+  RG     LG + + IQDLSKA E    SA
Sbjct: 628 AYYNRGLTNVFLGNNRQGIQDLSKAGELGIFSA 660



 Score = 41.2 bits (95), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 28/175 (16%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           +I ++++ +  +P++    + R    +  +DF+ A+ DL A ++ D     AY    L  
Sbjct: 483 SIDEVTEKIVKDPDNVMHYYARATDFYLVQDFDNALSDLDAAIECDSTFFPAYFMRALIH 542

Query: 528 SSIGEYKKAE---EAHLKA-----------------------IQLDRNFLEAWGHLTQFY 561
               EY+K +   E  +K                        I+L  +F  A+ +     
Sbjct: 543 YKQLEYRKRDTEAEYEMKVDNNSQQQVRVLDYAAIRRDLDEVIRLAPDFTYAYYNRGNIL 602

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
             + +   AL    + + +D RFS AY+ RGL    LG +++ I+DLS    LGI
Sbjct: 603 AVMKDYHAALVDYNKAIELDSRFSDAYYNRGLTNVFLGNNRQGIQDLSKAGELGI 657


>gi|411119538|ref|ZP_11391918.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410711401|gb|EKQ68908.1| TPR repeat-containing protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 2384

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 115/271 (42%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S GI    +GKY  A+  + Q L   P  PE L   G A     +LE AI+ + +A+  N
Sbjct: 76  SMGIVLRAQGKYTEAVEHYQQALALKPNQPEVLSNLGNALKELGKLEEAIAAYQQALNLN 135

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  EA    G A    G+  EA+    +A+  +PN A+  H  GIV  +    + A+  
Sbjct: 136 QAYAEAHNNLGIAYKDQGKLDEALACYREAIRLKPNYAEAHHNMGIVLRQQNKLDDAIHY 195

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L      AYT LG  L   G  ++A   + + + L  N+ E + +L    Q   
Sbjct: 196 FRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPNYAEGFNNLGLALQHQG 255

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+   QQ L +   F    +  G LL  + +  +AI      +   P+  E L   
Sbjct: 256 KLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAIAQHPNYPEALNNL 315

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
            +     G+  EAI  Y  AL+L  + +E  
Sbjct: 316 GNALQRQGKLDEAITHYQKALELRPNFVEAL 346



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 109/259 (42%), Gaps = 6/259 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+A  ++GK   AI+ F Q L   P +P      G        ++ AI+ + +AI  +P+
Sbjct: 248 GLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAIAQHPN 307

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA    G A    G+  EAI    KALE  PN  + L   G V        AAV  L 
Sbjct: 308 YPEALNNLGNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKLEAAVSYLE 367

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEA---HLKAIQLDRNFLEAWGHLTQFYQDL 564
             V L       +  LG   ++  E K+ +EA   +  A+ L     E   +L    Q +
Sbjct: 368 QAVSLGPSYAEIHNNLG---NAYQEQKRVDEAIACYRTAVALKPEMAEVHSNLGNMLQYI 424

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              E+A E  ++ + I   F+  Y+  G+     GQ ++A    S  L + P  +E  + 
Sbjct: 425 GEFEEAFEHFRKAIEIQPDFAGVYNNLGIAHRNAGQVQEAFAAYSKALELKPDFVEAHWN 484

Query: 625 RASCYHAIGEYREAIKDYD 643
            A  +  +G  ++  + Y+
Sbjct: 485 TALNHLLLGNLKQGFEGYE 503



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 47/332 (14%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +S G+     G+ A A  ++  +L+EDP   +AL   G      +  E A   F   +  
Sbjct: 8   ISTGLQYQRAGRVAEAEQVYKLLLREDPHSVDALNLLGALVYEDKRFEEAQEYFERVLSL 67

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P A EA    G    A G+  EA++   +AL  +PN  ++L   G    +      A+ 
Sbjct: 68  QPGA-EAHNSMGIVLRAQGKYTEAVEHYQQALALKPNQPEVLSNLGNALKELGKLEEAIA 126

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGE-------YKKA-------EEAH---------- 540
                + L++    A+  LG+A    G+       Y++A        EAH          
Sbjct: 127 AYQQALNLNQAYAEAHNNLGIAYKDQGKLDEALACYREAIRLKPNYAEAHHNMGIVLRQQ 186

Query: 541 ----------LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
                      +AI L  ++++A+  L    Q   N E+A+ C QQV+ +   +++ ++ 
Sbjct: 187 NKLDDAIHYFRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPNYAEGFNN 246

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDP------SNIECLYLRAS-CYHAIGEYREAI---K 640
            GL L   G+ ++AI      L + P      +N+  L L  +    AI  Y++AI    
Sbjct: 247 LGLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQQAIAQHP 306

Query: 641 DYDAALDLELDSMEKF--VLQCLAFYQKEIAL 670
           +Y  AL+   +++++   + + +  YQK + L
Sbjct: 307 NYPEALNNLGNALQRQGKLDEAITHYQKALEL 338



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/385 (21%), Positives = 151/385 (39%), Gaps = 35/385 (9%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI    + K   AI  F Q +   P Y +A    G+    Q   E AI+ + + +   P+
Sbjct: 180 GIVLRQQNKLDDAIHYFRQAIALKPHYIDAYTSLGSTLQQQGNGEEAIACYQQVVTLKPN 239

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             E +   G A    G+  EAI    +AL  +PN   + +  G +  +    + A+    
Sbjct: 240 YAEGFNNLGLALQHQGKLEEAIATFQQALALQPNFPGVCNNLGNLLLEVNRVDEAIASYQ 299

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +        A   LG AL   G+  +A   + KA++L  NF+EA  +L    +D    
Sbjct: 300 QAIAQHPNYPEALNNLGNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKL 359

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E A+  L+Q + +   +++ ++  G       +  +AI    + + + P   E      +
Sbjct: 360 EAAVSYLEQAVSLGPSYAEIHNNLGNAYQEQKRVDEAIACYRTAVALKPEMAEVHSNLGN 419

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKF------------VLQCLAFYQKEIAL---YT 672
               IGE+ EA + +  A++++ D    +            V +  A Y K + L   + 
Sbjct: 420 MLQYIGEFEEAFEHFRKAIEIQPDFAGVYNNLGIAHRNAGQVQEAFAAYSKALELKPDFV 479

Query: 673 ASKINSEFCWFDIDGDIDPLFKEY-----WCKRLHPKNVCEKVYRQPPLRDSLKKGKLRR 727
            +  N+      + G++   F+ Y     W + +  +    + Y QP            R
Sbjct: 480 EAHWNTALNHL-LLGNLKQGFEGYEWRFQWSRFI--EQNPSRSYSQP------------R 524

Query: 728 QDFSVTKQKTALLLVADSIGKKIQY 752
            D S+   KT LL     IG  +Q+
Sbjct: 525 WDGSLLDGKTILLYAEQGIGDTLQF 549



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 99/222 (44%), Gaps = 14/222 (6%)

Query: 429  RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------N 481
            R+L+ AI+ +   +++N +  + +     A    G+  EA+    KAL  +P       N
Sbjct: 922  RKLDEAIAYYQNTLKANDNHLDTYNNLAVALHEQGKLDEAMPYYQKALALKPDNPDAHNN 981

Query: 482  SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
             A++L ER          + A+      +    +   AY  LGLA  + G +  A EA+ 
Sbjct: 982  YANLLRER-------SRLDEAIYHYQQAIAARPDYPDAYNNLGLAYYAKGNFASAAEAYR 1034

Query: 542  KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
            +AI+   +F +A  HL    ++L N  +A    QQ + +   ++KAY+  G +    G  
Sbjct: 1035 QAIERKPHFPQALNHLGNALKELGNFAEAARYYQQAIALKPDYAKAYNNWGNIFRDEGDL 1094

Query: 602  KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
            + A++       IDP+  E  + +A      G+ R   ++Y+
Sbjct: 1095 QTAVQYYDQATEIDPNFAEAHWNKALTLLLGGDLRRGFEEYE 1136



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 60/153 (39%)

Query: 395  GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
            G    A ++  QIL++     +AL   G      +  E A       ++  P   E WK 
Sbjct: 1486 GNLTEAENLLRQILQQQSDDADALHILGVILCQTKRFEEATQQIQRLVELQPQFAEGWKN 1545

Query: 455  RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
             G A    G+  EAI    +A+  EPNS D+         +      AV      V L  
Sbjct: 1546 LGSALQEQGKFAEAIASYQRAIALEPNSPDVHQNLSTALLELDRPFEAVTHAERVVALKP 1605

Query: 515  ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            E    +  LG AL   G  ++A  ++ +AI L+
Sbjct: 1606 EFADGHYNLGYALRRAGRIEEAIASYRQAIALN 1638



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 75/155 (48%)

Query: 463  GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
            G   EA   L + L+ + + AD LH  G++  + K F  A + +   V+L  +    +  
Sbjct: 1486 GNLTEAENLLRQILQQQSDDADALHILGVILCQTKRFEEATQQIQRLVELQPQFAEGWKN 1545

Query: 523  LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            LG AL   G++ +A  ++ +AI L+ N  +   +L+    +L    +A+   ++V+ +  
Sbjct: 1546 LGSALQEQGKFAEAIASYQRAIALEPNSPDVHQNLSTALLELDRPFEAVTHAERVVALKP 1605

Query: 583  RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
             F+  ++  G  L   G+ ++AI      + ++P+
Sbjct: 1606 EFADGHYNLGYALRRAGRIEEAIASYRQAIALNPA 1640



 Score = 47.8 bits (112), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 98/245 (40%), Gaps = 43/245 (17%)

Query: 353 DMLKETSNEAKRNKKF--CVTRISKSKSISVDF--RLSR-GIAQVNEGKYASAISIFDQI 407
           + L    N  +R  K    +T   K+  +  +F   LS  G    ++ K  +A+S  +Q 
Sbjct: 310 EALNNLGNALQRQGKLDEAITHYQKALELRPNFVEALSNLGAVLKDQHKLEAAVSYLEQA 369

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           +   P Y E     G A   Q+ ++ AI+ +  A+   P   E     G     +GE  E
Sbjct: 370 VSLGPSYAEIHNNLGNAYQEQKRVDEAIACYRTAVALKPEMAEVHSNLGNMLQYIGEFEE 429

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           A +   KA+E +P+ A +                                  Y  LG+A 
Sbjct: 430 AFEHFRKAIEIQPDFAGV----------------------------------YNNLGIAH 455

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC----LQQVLYIDKR 583
            + G+ ++A  A+ KA++L  +F+EA  +    +  L N ++  E      Q   +I++ 
Sbjct: 456 RNAGQVQEAFAAYSKALELKPDFVEAHWNTALNHLLLGNLKQGFEGYEWRFQWSRFIEQN 515

Query: 584 FSKAY 588
            S++Y
Sbjct: 516 PSRSY 520



 Score = 45.1 bits (105), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 94/223 (42%), Gaps = 8/223 (3%)

Query: 480  PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
            P+SAD  H  G++    +  + A+      +K +  +   Y  L +AL   G+  +A   
Sbjct: 905  PDSADGWHLLGLIAHHDRKLDEAIAYYQNTLKANDNHLDTYNNLAVALHEQGKLDEAMPY 964

Query: 540  HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
            + KA+ L  +  +A  +     ++ +  ++A+   QQ +     +  AY+  GL  +  G
Sbjct: 965  YQKALALKPDNPDAHNNYANLLRERSRLDEAIYHYQQAIAARPDYPDAYNNLGLAYYAKG 1024

Query: 600  QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
                A +     +   P   + L    +    +G + EA + Y  A+ L+ D  + +   
Sbjct: 1025 NFASAAEAYRQAIERKPHFPQALNHLGNALKELGNFAEAARYYQQAIALKPDYAKAYN-N 1083

Query: 660  CLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKE-YWCKRL 701
                ++ E  L TA +      ++D   +IDP F E +W K L
Sbjct: 1084 WGNIFRDEGDLQTAVQ------YYDQATEIDPNFAEAHWNKAL 1120



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 69/166 (41%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
             +A   +GK   A+  + + L   P  P+A          +  L+ AI  + +AI + P 
Sbjct: 949  AVALHEQGKLDEAMPYYQKALALKPDNPDAHNNYANLLRERSRLDEAIYHYQQAIAARPD 1008

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              +A+   G A  A G    A +   +A+E +P+    L+  G    +  +F  A     
Sbjct: 1009 YPDAYNNLGLAYYAKGNFASAAEAYRQAIERKPHFPQALNHLGNALKELGNFAEAARYYQ 1068

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
              + L  +   AY   G      G+ + A + + +A ++D NF EA
Sbjct: 1069 QAIALKPDYAKAYNNWGNIFRDEGDLQTAVQYYDQATEIDPNFAEA 1114


>gi|385809655|ref|YP_005846051.1| hypothetical protein IALB_1072 [Ignavibacterium album JCM 16511]
 gi|383801703|gb|AFH48783.1| TPR repeat protein [Ignavibacterium album JCM 16511]
          Length = 471

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 117/262 (44%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           K+   +   D++L+  P   E  + +G       + E AI  F +A+  NP+  E    +
Sbjct: 55  KFEDGLYFTDKLLEIFPYNSELWLKKGILLNGLMKFEEAIDSFEKALSLNPNDTETLVDK 114

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
             A   +G   +A + L K L+ +P + D     G++  +   +  A+      +K+D +
Sbjct: 115 SAAEENMGLYQQAEESLRKVLDIDPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKIDPD 174

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
               Y  LG    ++  + KA EA+ K +  D      W +           E+A+ C  
Sbjct: 175 YVEVYYELGFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFD 234

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
               +   F+ A++ +G  L  LG++++AI+     + IDP +    Y  AS Y  IGE 
Sbjct: 235 LATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKVIEIDPYDETAFYNLASVYEEIGEL 294

Query: 636 REAIKDYDAALDLELDSMEKFV 657
           ++A+K Y  A++ + +  E ++
Sbjct: 295 QQAVKYYSKAIESDEEYFEAYL 316



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/270 (24%), Positives = 125/270 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + +  A+ N G Y  A     ++L  DP   +A    G     Q +   AI  F  AI+ 
Sbjct: 112 VDKSAAEENMGLYQQAEESLRKVLDIDPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKI 171

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P   E +   G    AL    +A++   K L+F+P +A   + +GI+  K      AV 
Sbjct: 172 DPDYVEVYYELGFCYEALNNFDKALEAYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVN 231

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                  +  +  SA+   G  L+ +G+Y++A E   K I++D     A+ +L   Y+++
Sbjct: 232 CFDLATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKVIEIDPYDETAFYNLASVYEEI 291

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A++   + +  D+ + +AY  RG     LG+++ A++D +  + I   + +    
Sbjct: 292 GELQQAVKYYSKAIESDEEYFEAYLARGYCYDSLGKYQLALRDFNKAISISSDDPDAWRA 351

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSME 654
           +A   +++G   E+IK Y  A  L+ D  +
Sbjct: 352 KADLEYSLGHLEESIKSYLEAARLQPDGYD 381



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 119/267 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L +GI      K+  AI  F++ L  +P   E L+ +  A       + A     + +  
Sbjct: 78  LKKGILLNGLMKFEEAIDSFEKALSLNPNDTETLVDKSAAEENMGLYQQAEESLRKVLDI 137

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P   +A+   G       +  EAI    +A++ +P+  ++ +E G       +F+ A+E
Sbjct: 138 DPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKIDPDYVEVYYELGFCYEALNNFDKALE 197

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +  D  N S +   G+ L   G+ ++A      A  +  +F  AW +      DL
Sbjct: 198 AYEKFLDFDPYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADL 257

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++A+EC  +V+ ID     A++    +   +G+ ++A+K  S  +  D    E    
Sbjct: 258 GKYQQAIECFHKVIEIDPYDETAFYNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLA 317

Query: 625 RASCYHAIGEYREAIKDYDAALDLELD 651
           R  CY ++G+Y+ A++D++ A+ +  D
Sbjct: 318 RGYCYDSLGKYQLALRDFNKAISISSD 344



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 108/265 (40%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   S G+    + KYA AI  F++ +K DP Y E     G         + A+  + + 
Sbjct: 143 DAFFSLGLLYQRQFKYAEAIPYFERAIKIDPDYVEVYYELGFCYEALNNFDKALEAYEKF 202

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           +  +P     W  +G      G+  EA+     A     + A   + +G        +  
Sbjct: 203 LDFDPYNASGWYNKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQ 262

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+E     +++D  +++A+  L      IGE ++A + + KAI+ D  + EA+      Y
Sbjct: 263 AIECFHKVIEIDPYDETAFYNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLARGYCY 322

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             L   + AL    + + I      A+  +  L + LG  +++IK       + P   + 
Sbjct: 323 DSLGKYQLALRDFNKAISISSDDPDAWRAKADLEYSLGHLEESIKSYLEAARLQPDGYDI 382

Query: 622 LYLRASCYHAIGEYREAIKDYDAAL 646
            Y  A  Y+   ++  A++ YD  L
Sbjct: 383 WYNLAETYYEANKWLNALEAYDQCL 407



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/231 (21%), Positives = 101/231 (43%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI  V  GK   A++ FD        +  A   +G   A   + + AI  F + I+ +
Sbjct: 215 NKGIILVKTGKLEEAVNCFDLATSVRDDFASAWYNKGNTLADLGKYQQAIECFHKVIEID 274

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+         +GE  +A++  SKA+E +    +    RG        +  A+ D
Sbjct: 275 PYDETAFYNLASVYEEIGELQQAVKYYSKAIESDEEYFEAYLARGYCYDSLGKYQLALRD 334

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + +  ++  A+        S+G  +++ +++L+A +L  +  + W +L + Y +  
Sbjct: 335 FNKAISISSDDPDAWRAKADLEYSLGHLEESIKSYLEAARLQPDGYDIWYNLAETYYEAN 394

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
               ALE   Q L I+ + S + + +  +   L + ++AI  L     I+P
Sbjct: 395 KWLNALEAYDQCLRINPKDSNSMYSKAKINFILHRTQEAIDCLRKAFEINP 445


>gi|317503054|ref|ZP_07961133.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315665827|gb|EFV05415.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 657

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 117/256 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA+ + G Y  A   F+Q +K +P   E L  R   R   R    A  D+ +AI+ +P
Sbjct: 65  RGIAKQSLGDYTGAEDDFNQAIKLNPYVHELLRERANNRMNLRLFSQADQDYGKAIELSP 124

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              E W  R  AR       +  QDL   L+  P+  +             D   A + +
Sbjct: 125 DNKEYWFNRALARFYQHNIKQTRQDLYYILKRWPSLPNAYALMTETYLSANDTLQARKWV 184

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +K++  + ++++ LG        +K+AE+A  +AI    N +  + +      +L  
Sbjct: 185 EKTLKINPYDGNSWSILGRLNLRQNNWKRAEQAFSQAIHYIPNVVNNYTYRAMCRVNLNM 244

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+E   + + +D     A++ RGLL   +G    AIKD S  L ++P+N++  Y RA
Sbjct: 245 LRQAMEDFNKAIEMDPNSFLAHYNRGLLGMTVGDDNNAIKDFSYVLRLEPNNLQARYNRA 304

Query: 627 SCYHAIGEYREAIKDY 642
                +G+YR AI DY
Sbjct: 305 LLLDRVGDYRSAIADY 320



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 53/123 (43%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G   + +  +  A   F Q +   P        R   R     L  A+ DF +AI+ +P+
Sbjct: 202 GRLNLRQNNWKRAEQAFSQAIHYIPNVVNNYTYRAMCRVNLNMLRQAMEDFNKAIEMDPN 261

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
           +  A   RG     +G+   AI+D S  L  EPN+    + R ++  +  D+ +A+ D S
Sbjct: 262 SFLAHYNRGLLGMTVGDDNNAIKDFSYVLRLEPNNLQARYNRALLLDRVGDYRSAIADYS 321

Query: 508 ACV 510
             +
Sbjct: 322 RVI 324


>gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21]
 gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. AL-21]
          Length = 693

 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 131/301 (43%), Gaps = 34/301 (11%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+   N  ++  +I  +D+ L  +P        +  +     E E  I  +  A++ +P 
Sbjct: 275 GLVLYNLKQFPQSIESYDRALDLEPKSAAIWNSKALSLYEIHEHEEEIGCYNHALEIDPE 334

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD--------- 498
             EAW  +G     LG + EA+  L KALE  PN    L  +  V    +D         
Sbjct: 335 FSEAWTNKGATYLTLGRNEEALVCLEKALELNPNDQTALMNKASVLISVEDYDDAILYCD 394

Query: 499 -------------------------FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
                                    F+ ++E L     +D +N  A+  +G++   + + 
Sbjct: 395 RVLEIDSNQVAALFLKARTQQNIAKFDESIETLERITSIDPDNDEAWFLIGVSQEYLNKP 454

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           + A  +  KAI+++   + AW    +    L  +++AL+  + V  +D    +A+HL GL
Sbjct: 455 EDALVSFNKAIEIEPKNIGAWYFKGRSLMMLGRADEALKSYEMVTLMDPENYEAFHLTGL 514

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
           +    G + +A+K+  + L I P NI+ L  +   Y  + +  +A++ +D ALDLE D++
Sbjct: 515 INMEQGNYDEALKNFDAVLNISPDNIDVLINKGQAYGFMDKPEKALEYFDEALDLESDNV 574

Query: 654 E 654
           E
Sbjct: 575 E 575



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 130/275 (47%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R+ +  S  V     +   Q N  K+  +I   ++I   DP   EA    G ++ +  + 
Sbjct: 395 RVLEIDSNQVAALFLKARTQQNIAKFDESIETLERITSIDPDNDEAWFLIGVSQEYLNKP 454

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E A+  F +AI+  P    AW  +G++   LG + EA++        +P + +  H  G+
Sbjct: 455 EDALVSFNKAIEIEPKNIGAWYFKGRSLMMLGRADEALKSYEMVTLMDPENYEAFHLTGL 514

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           +N +  +++ A+++  A + +  +N       G A   + + +KA E   +A+ L+ + +
Sbjct: 515 INMEQGNYDEALKNFDAVLNISPDNIDVLINKGQAYGFMDKPEKALEYFDEALDLESDNV 574

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           EA  +     + + + + +++  + VL ++     A+H  GL    +G+++KAI+   + 
Sbjct: 575 EALNYRGVALKHMGDHDASIKTFEAVLEMEPENPWAWHQIGLNYKEVGEYEKAIESFDNA 634

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           L  DP  +  L  +  C     +++EA++ +D  L
Sbjct: 635 LDEDPKFLLALLEKGVCLGMNKQFKEALECFDDVL 669



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 116/265 (43%), Gaps = 4/265 (1%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI   D++L+ D     AL  +   +    + + +I         +P   EAW   G
Sbjct: 386 YDDAILYCDRVLEIDSNQVAALFLKARTQQNIAKFDESIETLERITSIDPDNDEAWFLIG 445

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            ++  L +  +A+   +KA+E EP +    + +G         + A++       +D EN
Sbjct: 446 VSQEYLNKPEDALVSFNKAIEIEPKNIGAWYFKGRSLMMLGRADEALKSYEMVTLMDPEN 505

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             A+   GL     G Y +A +     + +  + ++   +  Q Y  +   EKALE   +
Sbjct: 506 YEAFHLTGLINMEQGNYDEALKNFDAVLNISPDNIDVLINKGQAYGFMDKPEKALEYFDE 565

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            L ++    +A + RG+ L  +G H  +IK   + L ++P N    +     Y  +GEY 
Sbjct: 566 ALDLESDNVEALNYRGVALKHMGDHDASIKTFEAVLEMEPENPWAWHQIGLNYKEVGEYE 625

Query: 637 EAIKDYDAALDLELDSMEKFVLQCL 661
           +AI+ +D ALD +     KF+L  L
Sbjct: 626 KAIESFDNALDED----PKFLLALL 646



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 129/289 (44%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           +  + +  S   D    +G A    G+   AI  F+  L  +P++ E+   +G A +   
Sbjct: 155 INEVLEEVSDDPDLYFKKGNALGGLGRTDEAIEAFETSLNLNPLFVESWNAKGVAYSMLE 214

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
               A+  F  AI  +      W  + +    + E  EA     KA++  P + +  ++ 
Sbjct: 215 CYSDALICFDHAIDLDVDDDRGWFLKAETLTKMNELKEAFDCYKKAVDLNPLNTEGWYKL 274

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+V +  K F  ++E     + L+ ++ + +    L+L  I E+++    +  A+++D  
Sbjct: 275 GLVLYNLKQFPQSIESYDRALDLEPKSAAIWNSKALSLYEIHEHEEEIGCYNHALEIDPE 334

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           F EAW +    Y  L  +E+AL CL++ L ++     A   +  +L  +  +  AI    
Sbjct: 335 FSEAWTNKGATYLTLGRNEEALVCLEKALELNPNDQTALMNKASVLISVEDYDDAILYCD 394

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVL 658
             L ID + +  L+L+A     I ++ E+I+  +    ++ D+ E + L
Sbjct: 395 RVLEIDSNQVAALFLKARTQQNIAKFDESIETLERITSIDPDNDEAWFL 443



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 130/314 (41%), Gaps = 7/314 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G+A +  GK   AI  FD+ L   P YP AL     A       + ++  F +A++ +P
Sbjct: 36  KGMALMGLGKINEAIECFDKSLAIMPNYPWALDNMCMALLLVERYDESLECFDKALEIHP 95

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                   +    +++G    A+    + L+   N   +L E+       + ++ A+  +
Sbjct: 96  DDEVLINNKAFLLSSMGNFEGALILFDEILKTTDNKNSVLKEKTNCLLNLERYDDALNSI 155

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++   ++   Y   G AL  +G   +A EA   ++ L+  F+E+W      Y  L  
Sbjct: 156 NEVLEEVSDDPDLYFKKGNALGGLGRTDEAIEAFETSLNLNPLFVESWNAKGVAYSMLEC 215

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
              AL C    + +D    + + L+   L  + + K+A       + ++P N E  Y   
Sbjct: 216 YSDALICFDHAIDLDVDDDRGWFLKAETLTKMNELKEAFDCYKKAVDLNPLNTEGWYKLG 275

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDID 686
              + + ++ ++I+ YD ALDLE  S   +  + L+ Y+           N         
Sbjct: 276 LVLYNLKQFPQSIESYDRALDLEPKSAAIWNSKALSLYEIHEHEEEIGCYNHAL------ 329

Query: 687 GDIDPLFKEYWCKR 700
            +IDP F E W  +
Sbjct: 330 -EIDPEFSEAWTNK 342



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/314 (21%), Positives = 132/314 (42%), Gaps = 36/314 (11%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G +  A+ +FD+ILK        L  +          + A++   E ++      + + +
Sbjct: 112 GNFEGALILFDEILKTTDNKNSVLKEKTNCLLNLERYDDALNSINEVLEEVSDDPDLYFK 171

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G A   LG + EAI+    +L   P   +  + +G+     + ++ A+      + LD 
Sbjct: 172 KGNALGGLGRTDEAIEAFETSLNLNPLFVESWNAKGVAYSMLECYSDALICFDHAIDLDV 231

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-------HLTQFYQDLANS 567
           ++   +      L+ + E K+A + + KA+ L+    E W        +L QF Q + + 
Sbjct: 232 DDDRGWFLKAETLTKMNELKEAFDCYKKAVDLNPLNTEGWYKLGLVLYNLKQFPQSIESY 291

Query: 568 EKALE---------------------------CLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
           ++AL+                           C    L ID  FS+A+  +G     LG+
Sbjct: 292 DRALDLEPKSAAIWNSKALSLYEIHEHEEEIGCYNHALEIDPEFSEAWTNKGATYLTLGR 351

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
           +++A+  L   L ++P++   L  +AS   ++ +Y +AI   D    LE+DS +   L  
Sbjct: 352 NEEALVCLEKALELNPNDQTALMNKASVLISVEDYDDAILYCDRV--LEIDSNQVAALFL 409

Query: 661 LAFYQKEIALYTAS 674
            A  Q+ IA +  S
Sbjct: 410 KARTQQNIAKFDES 423



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 7/260 (2%)

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           E +++N    E W R+G A   LG+  EAI+   K+L   PN    L    +     + +
Sbjct: 21  ELLKTNSEDYETWTRKGMALMGLGKINEAIECFDKSLAIMPNYPWALDNMCMALLLVERY 80

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           + ++E     +++  +++         LSS+G ++ A     + ++   N        T 
Sbjct: 81  DESLECFDKALEIHPDDEVLINNKAFLLSSMGNFEGALILFDEILKTTDNKNSVLKEKTN 140

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
              +L   + AL  + +VL         Y  +G  L GLG+  +AI+   + L ++P  +
Sbjct: 141 CLLNLERYDDALNSINEVLEEVSDDPDLYFKKGNALGGLGRTDEAIEAFETSLNLNPLFV 200

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSE 679
           E    +   Y  +  Y +A+  +D A+DL++D    + L       K   L   +++   
Sbjct: 201 ESWNAKGVAYSMLECYSDALICFDHAIDLDVDDDRGWFL-------KAETLTKMNELKEA 253

Query: 680 FCWFDIDGDIDPLFKEYWCK 699
           F  +    D++PL  E W K
Sbjct: 254 FDCYKKAVDLNPLNTEGWYK 273



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 67/153 (43%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           ++D  +++G A     K   A+  FD+ L  +    EAL  RG A     + +A+I  F 
Sbjct: 539 NIDVLINKGQAYGFMDKPEKALEYFDEALDLESDNVEALNYRGVALKHMGDHDASIKTFE 598

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
             ++  P    AW + G     +GE  +AI+    AL+ +P     L E+G+     K F
Sbjct: 599 AVLEMEPENPWAWHQIGLNYKEVGEYEKAIESFDNALDEDPKFLLALLEKGVCLGMNKQF 658

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
             A+E     +  D +N  A  +  + +  + E
Sbjct: 659 KEALECFDDVLIKDPQNPDALQFKNMTIQMMNE 691


>gi|325298804|ref|YP_004258721.1| hypothetical protein [Bacteroides salanitronis DSM 18170]
 gi|324318357|gb|ADY36248.1| Tetratricopeptide TPR_1 repeat-containing protein [Bacteroides
           salanitronis DSM 18170]
          Length = 668

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    RG A+    + + A +D TE+I+ NP     ++ RG
Sbjct: 41  YVLSIQYFNQVINAKPYLAEPYFYRGLAKLNLDDFQGAEADCTESIERNPYVPNTYQVRG 100

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHE---------------------------- 488
            AR    +   AIQD  KAL F+P +  + H                             
Sbjct: 101 IARIQQEDYKGAIQDYEKALTFDPENTSLWHNLALSRMRDEDYKEAKADLDTLIRIAPRY 160

Query: 489 ------RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
                 R  V+ K KD   A+ D    +++D+ N   +   G+      +Y  AE    +
Sbjct: 161 IDAYLMRTEVSLKQKDTLQAMSDADRAIEMDRYNADTWASRGMLFLQRSKYADAESDLTE 220

Query: 543 AIQLD-RNF-LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
           AI+L  RN  L     L ++YQ+  N   A+      L IDK     ++ RGLL   +G 
Sbjct: 221 AIRLSVRNAGLYINRALARYYQN--NLRGAMSDYDLALDIDKNNFIGHYNRGLLRAQVGD 278

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
             +AI+D    L I+P N+  ++ R       G+Y  AI DY + L+
Sbjct: 279 DNRAIEDFDFVLQIEPDNMMAVFNRGLLRDRTGDYAGAISDYTSVLE 325



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 99/216 (45%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           +I  F + I + P   E +  RG A+  L +   A  D ++++E  P   +    RGI  
Sbjct: 44  SIQYFNQVINAKPYLAEPYFYRGLAKLNLDDFQGAEADCTESIERNPYVPNTYQVRGIAR 103

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            + +D+  A++D    +  D EN S +  L L+     +YK+A+      I++   +++A
Sbjct: 104 IQQEDYKGAIQDYEKALTFDPENTSLWHNLALSRMRDEDYKEAKADLDTLIRIAPRYIDA 163

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           +   T+      ++ +A+    + + +D+  +  +  RG+L     ++  A  DL+  + 
Sbjct: 164 YLMRTEVSLKQKDTLQAMSDADRAIEMDRYNADTWASRGMLFLQRSKYADAESDLTEAIR 223

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +   N      RA   +     R A+ DYD ALD++
Sbjct: 224 LSVRNAGLYINRALARYYQNNLRGAMSDYDLALDID 259



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 73/160 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+  +   KYA A S   + ++         I R  AR +Q  L  A+SD+  A+  +
Sbjct: 200 SRGMLFLQRSKYADAESDLTEAIRLSVRNAGLYINRALARYYQNNLRGAMSDYDLALDID 259

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +       RG  RA +G+   AI+D    L+ EP++   +  RG++  +  D+  A+ D
Sbjct: 260 KNNFIGHYNRGLLRAQVGDDNRAIEDFDFVLQIEPDNMMAVFNRGLLRDRTGDYAGAISD 319

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            ++ ++      + Y Y   A    G+ K A +  +  +Q
Sbjct: 320 YTSVLEEYPNFLAGYQYRAEARKKTGDLKGASQDEMVVLQ 359



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%)

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           QV    YA      D++++  P +  A   RG   A  ++  AA+ D+ +AI+ +P   +
Sbjct: 563 QVRALDYAMVRDDLDKVIQLAPDFVYAYYNRGNIYAVMKDYRAALVDYNKAIELDPRFSD 622

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEF 478
           A+  RG     LG + E +QDLSKA E 
Sbjct: 623 AYYNRGLTNVFLGNNNEGVQDLSKAGEL 650



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 102/264 (38%), Gaps = 34/264 (12%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            ++++ +  Y  A +  D +++  P Y +A + R      Q++   A+SD   AI+ +  
Sbjct: 134 ALSRMRDEDYKEAKADLDTLIRIAPRYIDAYLMRTEVSLKQKDTLQAMSDADRAIEMDRY 193

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             + W  RG       +  +A  DL++A+     +A +   R +  +   +   A+ D  
Sbjct: 194 NADTWASRGMLFLQRSKYADAESDLTEAIRLSVRNAGLYINRALARYYQNNLRGAMSDYD 253

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + +DK N             IG Y             +R  L A          + + 
Sbjct: 254 LALDIDKNN------------FIGHY-------------NRGLLRAQ---------VGDD 279

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
            +A+E    VL I+     A   RGLL    G +  AI D +S L   P+ +     RA 
Sbjct: 280 NRAIEDFDFVLQIEPDNMMAVFNRGLLRDRTGDYAGAISDYTSVLEEYPNFLAGYQYRAE 339

Query: 628 CYHAIGEYREAIKDYDAALDLELD 651
                G+ + A +D    L  +LD
Sbjct: 340 ARKKTGDLKGASQDEMVVLQAQLD 363



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 429 RELEAAI--SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           R L+ A+   D  + IQ  P    A+  RG   A + +   A+ D +KA+E +P  +D  
Sbjct: 565 RALDYAMVRDDLDKVIQLAPDFVYAYYNRGNIYAVMKDYRAALVDYNKAIELDPRFSDAY 624

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKL 512
           + RG+ N    + N  V+DLS   +L
Sbjct: 625 YNRGLTNVFLGNNNEGVQDLSKAGEL 650



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 26/162 (16%)

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           EP +A     R +  +  +DF+ A+ DL+  ++ D     AY           EY+K + 
Sbjct: 491 EPENALHYFARALDFYLVQDFDNALADLNRTIERDSVFFPAYFMRAAIHYKQIEYRKRDT 550

Query: 539 AHL------------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +                         K IQL  +F+ A+ +    Y  + +   AL   
Sbjct: 551 QYEIEQPDDKKLQVRALDYAMVRDDLDKVIQLAPDFVYAYYNRGNIYAVMKDYRAALVDY 610

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
            + + +D RFS AY+ RGL    LG + + ++DLS    LGI
Sbjct: 611 NKAIELDPRFSDAYYNRGLTNVFLGNNNEGVQDLSKAGELGI 652


>gi|425458571|ref|ZP_18838059.1| exported hypothetical protein [Microcystis aeruginosa PCC 9808]
 gi|389827136|emb|CCI21817.1| exported hypothetical protein [Microcystis aeruginosa PCC 9808]
          Length = 695

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 136/318 (42%), Gaps = 27/318 (8%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
              R+ +    +VD  L RGIA + + KY +AI+   +++K +P    A   RG AR + 
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + A+ D++ AI+ +P    A+  RG   A LGE  +AI D ++A+  +P+       
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY------LGLALSSIGEYKKAEEAHL- 541
           RG   +  KD+  A+ D +  +   + +   + Y       GL ++ I E   A +  L 
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNFLEYSGLGFQYRRHESGQGLIITKIFENSPAFKQGLI 440

Query: 542 -----KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK-------------- 582
                 AI       ++   L +   +  +SE   +   ++   D+              
Sbjct: 441 LDDLIIAINGKSTLNKSAEDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAV 500

Query: 583 -RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
            R +  Y  RG   + L  +K +I D +  +  +P        RA     +GE++EAIKD
Sbjct: 501 PRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKD 560

Query: 642 YDAALDLELDSMEKFVLQ 659
            + A+ L       + L+
Sbjct: 561 LNQAISLNPKDARAYFLR 578



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 5/178 (2%)

Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           FD  L KE+   P +     GRG AR + ++ + +ISD+ EAI+ NP    A++ R  AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADAR 548

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKS 518
             LGE  EAI+DL++A+   P  A     RG I + +FK +  A++D +  +  D +   
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQALLNDPQYHI 608

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
           AY   GL    +G+ + A   H + I+L  ++  A+ +    Y+DL    KALE  ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+ GI++ N G Y  AI+ ++++L+  P   +A + RG A   Q + +AAI+D TE I+ 
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+  RG AR    ++  A++D S A+  +P  +   + RG V  +  ++  A+ 
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           D +  ++LD +   AY   G A  S+ +Y+ A   + +A+    NFLE  G   Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 35/208 (16%)

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+   P+A E     G ++A  G   EAI   ++ L+  PN+ D   +RGI   +   + 
Sbjct: 232 AVALQPTA-EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQ 290

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           AA+ D++  +KL+  N  AY + GLA                     R++ E        
Sbjct: 291 AAIADMTEVIKLNPNNSRAYFWRGLA---------------------RDYSE-------- 321

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
                +++ ALE     + +D  +S AY+ RG +   LG+++KAI D +  + +DP    
Sbjct: 322 -----DNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFL 376

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
               R    +++ +Y+ AI DY  AL+ 
Sbjct: 377 AYENRGDARYSLKDYQGAISDYTQALNF 404



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 73/139 (52%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E L+  G ++A     E AI+ +   +Q +P+  +A+ +RG A     +   AI D+++ 
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           ++  PN++     RG+     +D   A+ED S  ++LD E   AY   G   + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359

Query: 536 AEEAHLKAIQLDRNFLEAW 554
           A   + +AI+LD +   A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 3/175 (1%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I+  +S S+ F   RG A+     Y  +IS +++ +K +P Y  A   R  AR    E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
            AI D  +AI  NP    A+  RG   +   ++  EA++D ++AL  +P       ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQALLNDPQYHIAYFERGL 615

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           ++ +  D   A+ D +  ++L  +  +AY   GL+   +GE  KA E   KA +L
Sbjct: 616 IHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 5/155 (3%)

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
           LG++ ++ G Y++A  A+ + +Q+  N ++A+      Y +    + A+  + +V+ ++ 
Sbjct: 245 LGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNP 304

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
             S+AY  RGL       ++ A++D S  + +DP        R + Y  +GEY++AI DY
Sbjct: 305 NNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDY 364

Query: 643 DAALDLELDSMEKF-----VLQCLAFYQKEIALYT 672
             A+ L+ D    +         L  YQ  I+ YT
Sbjct: 365 TEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYT 399



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 117/266 (43%), Gaps = 16/266 (6%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG      G+Y  AI  + + ++ DP    A   RG AR   ++ + AISD+T+A+   
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
             +G  ++ R   R   G+ +     ++K  E  P      IL +  I        N + 
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458

Query: 504 EDLSACV--KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           EDL      ++  E+ +  T L L     G++         A+    +     G+   + 
Sbjct: 459 EDLVELTVNQMSSESVTQVT-LKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYL 517

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           +D   S   +    + +  + +++ AY  R      LG+H++AIKDL+  + ++P +   
Sbjct: 518 KDYKGS---ISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARA 574

Query: 622 LYLRASCY-HAIGEYREAIKDYDAAL 646
            +LR   + +    Y+EA+KDY+ AL
Sbjct: 575 YFLRGWIHSNRFKAYQEALKDYNQAL 600



 Score = 40.0 bits (92), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 14/158 (8%)

Query: 360 NEA-KRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           NEA KRN K+              +R  R  A+   G++  AI   +Q +  +P    A 
Sbjct: 528 NEAIKRNPKYAAA-----------YR-ERADARDELGEHQEAIKDLNQAISLNPKDARAY 575

Query: 419 IGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
             RG   + + +  + A+ D+ +A+ ++P    A+  RG     LG++  AI D ++ + 
Sbjct: 576 FLRGWIHSNRFKAYQEALKDYNQALLNDPQYHIAYFERGLIHRELGDNRGAINDHTQVIR 635

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
             P+ A+  + RG+      +   A+ED     +L K+
Sbjct: 636 LVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAELYKQ 673


>gi|427724340|ref|YP_007071617.1| hypothetical protein Lepto7376_2509 [Leptolyngbya sp. PCC 7376]
 gi|427356060|gb|AFY38783.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 925

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 107/233 (45%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           EA   +G           AI+ + +A++ NP+  + W  RG A + LG+  EAI    KA
Sbjct: 77  EAWFNQGYQFHIAGRFIEAIASYDKALEINPNDQDIWNNRGSALSTLGKKDEAITSYDKA 136

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           LE  P+  D  + RG           A+      ++++  +  A+   G ALS +G  ++
Sbjct: 137 LEINPDDQDTWNNRGSTLSDLGRKEEAITSYDKSLEINPNHYQAWRNRGSALSDLGRKEE 196

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A  +  KA++++ N+ EAWG            E+A+    +   I   + +  + RG  L
Sbjct: 197 AIISFDKALEINPNYHEAWGARGNALLACERYEEAITSFDKAFDISPNYDETPYGRGYAL 256

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             LG+H++AI      L I+P++ +    +      + ++ E I  Y+ +L++
Sbjct: 257 EKLGKHEEAIISFDKALEINPNHYQAWNGKGRALVELAQFSEGIDSYNKSLEI 309



 Score = 84.0 bits (206), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 95/200 (47%)

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            EAW  +G      G  +EAI    KALE  PN  DI + RG         + A+     
Sbjct: 76  AEAWFNQGYQFHIAGRFIEAIASYDKALEINPNDQDIWNNRGSALSTLGKKDEAITSYDK 135

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            ++++ +++  +   G  LS +G  ++A  ++ K+++++ N  +AW +      DL   E
Sbjct: 136 ALEINPDDQDTWNNRGSTLSDLGRKEEAITSYDKSLEINPNHYQAWRNRGSALSDLGRKE 195

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+    + L I+  + +A+  RG  L    ++++AI        I P+  E  Y R   
Sbjct: 196 EAIISFDKALEINPNYHEAWGARGNALLACERYEEAITSFDKAFDISPNYDETPYGRGYA 255

Query: 629 YHAIGEYREAIKDYDAALDL 648
              +G++ EAI  +D AL++
Sbjct: 256 LEKLGKHEEAIISFDKALEI 275



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 130/298 (43%), Gaps = 15/298 (5%)

Query: 320 DSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSI 379
           +S+ N++  S   I + K S+  E+     +++ +            +F     S  K++
Sbjct: 54  NSSPNTKQNSAEQIPEPKDSNDAEAWFNQGYQFHIAG----------RFIEAIASYDKAL 103

Query: 380 SV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
            +     D   +RG A    GK   AI+ +D+ L+ +P   +    RG+  +     E A
Sbjct: 104 EINPNDQDIWNNRGSALSTLGKKDEAITSYDKALEINPDDQDTWNNRGSTLSDLGRKEEA 163

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I+ + ++++ NP+  +AW+ RG A + LG   EAI    KALE  PN  +    RG    
Sbjct: 164 ITSYDKSLEINPNHYQAWRNRGSALSDLGRKEEAIISFDKALEINPNYHEAWGARGNALL 223

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             + +  A+        +           G AL  +G++++A  +  KA++++ N  +AW
Sbjct: 224 ACERYEEAITSFDKAFDISPNYDETPYGRGYALEKLGKHEEAIISFDKALEINPNHYQAW 283

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
               +   +LA   + ++   + L I       +  +G  L+ +   K AI +  +GL
Sbjct: 284 NGKGRALVELAQFSEGIDSYNKSLEIMPSSWPTWGNKGSALYLIHGEKAAILNWQTGL 341



 Score = 46.2 bits (108), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 7/183 (3%)

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           D  +  A+   G      G + +A  ++ KA++++ N  + W +       L   ++A+ 
Sbjct: 72  DSNDAEAWFNQGYQFHIAGRFIEAIASYDKALEINPNDQDIWNNRGSALSTLGKKDEAIT 131

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
              + L I+      ++ RG  L  LG+ ++AI      L I+P++ +    R S    +
Sbjct: 132 SYDKALEINPDDQDTWNNRGSTLSDLGRKEEAITSYDKSLEINPNHYQAWRNRGSALSDL 191

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPL 692
           G   EAI  +D AL++  +  E       A+  +  AL    +       FD   DI P 
Sbjct: 192 GRKEEAIISFDKALEINPNYHE-------AWGARGNALLACERYEEAITSFDKAFDISPN 244

Query: 693 FKE 695
           + E
Sbjct: 245 YDE 247



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)

Query: 46  LCSLRNWSKAIRILDSLLAQSYEIQDICN-RAFCYSQLELHKHVIRDCDKALQLDPTLLQ 104
           L +L    +AI   D  L  + + QD  N R    S L   +  I   DK+L+++P   Q
Sbjct: 120 LSTLGKKDEAITSYDKALEINPDDQDTWNNRGSTLSDLGRKEEAITSYDKSLEINPNHYQ 179

Query: 105 AYILKGCAFSALGRKEEALSVWEKGYE 131
           A+  +G A S LGRKEEA+  ++K  E
Sbjct: 180 AWRNRGSALSDLGRKEEAIISFDKALE 206


>gi|225620792|ref|YP_002722050.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225215612|gb|ACN84346.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
          Length = 605

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 8/173 (4%)

Query: 386 SRGIAQV----NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           +RGI +     NEG    A+  +++ ++ +P Y E    RG  + +   +E +I D+ +A
Sbjct: 363 NRGICKEKLKDNEG----ALEDYNKAIQLNPNYSEVYNNRGNVKIYLGNMEESIKDYNKA 418

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ NP+  EA+  RG  +  L ++  A++D +KA+E  PN +++ + RG +    KD   
Sbjct: 419 IQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIELNPNLSEVYNNRGTIKEILKDNEG 478

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           A+ED    ++L+  +   Y   G A +++G    A      AI+L+ N++EA+
Sbjct: 479 ALEDYDKAIELNPNDSEFYYNRGTAKTNLGNIDGAVVDFDNAIELNPNYVEAY 531



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 116/243 (47%)

Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
           Y  A    GTA+   +  + AI    +AI+ NP    A+   G    A+ E  +++   +
Sbjct: 289 YAGAFYNIGTAKYELKIYDEAIEYLNKAIELNPYHSGAYNNLGLVYYAIKEYDKSLNYFN 348

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
            ++          + RGI   K KD   A+ED +  ++L+      Y   G     +G  
Sbjct: 349 YSISLNNKEPKTYNNRGICKEKLKDNEGALEDYNKAIQLNPNYSEVYNNRGNVKIYLGNM 408

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           +++ + + KAIQL+ N+ EA+ +     + L ++E ALE   + + ++   S+ Y+ RG 
Sbjct: 409 EESIKDYNKAIQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIELNPNLSEVYNNRGT 468

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
           +   L  ++ A++D    + ++P++ E  Y R +    +G    A+ D+D A++L  + +
Sbjct: 469 IKEILKDNEGALEDYDKAIELNPNDSEFYYNRGTAKTNLGNIDGAVVDFDNAIELNPNYV 528

Query: 654 EKF 656
           E +
Sbjct: 529 EAY 531



 Score = 79.7 bits (195), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 114/238 (47%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A+     Y  AI   ++ ++ +P +  A    G      +E + +++ F  +I  N  
Sbjct: 297 GTAKYELKIYDEAIEYLNKAIELNPYHSGAYNNLGLVYYAIKEYDKSLNYFNYSISLNNK 356

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             + +  RG  +  L ++  A++D +KA++  PN +++ + RG V     +   +++D +
Sbjct: 357 EPKTYNNRGICKEKLKDNEGALEDYNKAIQLNPNYSEVYNNRGNVKIYLGNMEESIKDYN 416

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             ++L+     AY   GL    + + + A E + KAI+L+ N  E + +     + L ++
Sbjct: 417 KAIQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIELNPNLSEVYNNRGTIKEILKDN 476

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           E ALE   + + ++   S+ Y+ RG     LG    A+ D  + + ++P+ +E  + R
Sbjct: 477 EGALEDYDKAIELNPNDSEFYYNRGTAKTNLGNIDGAVVDFDNAIELNPNYVEAYFNR 534



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 85/168 (50%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A   +  G   ++ K ++ A+E L+  ++L+  +  AY  LGL   +I EY K+    
Sbjct: 288 NYAGAFYNIGTAKYELKIYDEAIEYLNKAIELNPYHSGAYNNLGLVYYAIKEYDKSLNYF 347

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
             +I L+    + + +     + L ++E ALE   + + ++  +S+ Y+ RG +   LG 
Sbjct: 348 NYSISLNNKEPKTYNNRGICKEKLKDNEGALEDYNKAIQLNPNYSEVYNNRGNVKIYLGN 407

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            +++IKD +  + ++P+  E    R      + +   A++DY+ A++L
Sbjct: 408 MEESIKDYNKAIQLNPNYSEAYNNRGLLKRQLKDNEGALEDYNKAIEL 455



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           NEG    A+  +++ ++ +P   E    RGT +   ++ E A+ D+ +AI+ NP+  E +
Sbjct: 442 NEG----ALEDYNKAIELNPNLSEVYNNRGTIKEILKDNEGALEDYDKAIELNPNDSEFY 497

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
             RG A+  LG    A+ D   A+E  PN  +    R I
Sbjct: 498 YNRGTAKTNLGNIDGAVVDFDNAIELNPNYVEAYFNRYI 536


>gi|425435038|ref|ZP_18815498.1| exported hypothetical protein [Microcystis aeruginosa PCC 9432]
 gi|389675288|emb|CCH95612.1| exported hypothetical protein [Microcystis aeruginosa PCC 9432]
          Length = 695

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 136/318 (42%), Gaps = 27/318 (8%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
              R+ +    +VD  L RGIA + + KY +AI+   +++K +P    A   RG AR + 
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + A+ D++ AI+ +P    A+  RG   A LGE  +AI D ++A+  +P+       
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY------LGLALSSIGEYKKAEEAHL- 541
           RG   +  KD+  A+ D +  +   + +   + Y       GL ++ I E   A +  L 
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNFLEYSGLGFQYRRHESGQGLIITKIFENSPAFKQGLI 440

Query: 542 -----KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK-------------- 582
                 AI       ++   L +   +  +SE   +   ++   D+              
Sbjct: 441 LDDLIIAINGKSTLNKSAEDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAV 500

Query: 583 -RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
            R +  Y  RG   + L  +K +I D +  +  +P        RA     +GE++EAIKD
Sbjct: 501 PRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKD 560

Query: 642 YDAALDLELDSMEKFVLQ 659
            + A+ L       + L+
Sbjct: 561 LNQAISLNPKDARAYFLR 578



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 5/178 (2%)

Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           FD  L KE+   P +     GRG AR + ++ + +ISD+ EAI+ NP    A++ R  AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADAR 548

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKS 518
             LGE  EAI+DL++A+   P  A     RG I + +FK +  A++D +  +  D +   
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYHI 608

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
           AY   GL    +G+ + A   H + I+L  ++  A+ +    Y+DL    KALE  ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+ GI++ N G Y  AI+ ++++L+  P   +A + RG A   Q + +AAI+D TE I+ 
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+  RG AR    ++  A++D S A+  +P  +   + RG V  +  ++  A+ 
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           D +  ++LD +   AY   G A  S+ +Y+ A   + +A+    NFLE  G   Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 35/208 (16%)

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+   P+A E     G ++A  G   EAI   ++ L+  PN+ D   +RGI   +   + 
Sbjct: 232 AVALQPTA-EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQ 290

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           AA+ D++  +KL+  N  AY + GLA                     R++ E        
Sbjct: 291 AAIADMTEVIKLNPNNSRAYFWRGLA---------------------RDYSE-------- 321

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
                +++ ALE     + +D  +S AY+ RG +   LG+++KAI D +  + +DP    
Sbjct: 322 -----DNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFL 376

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
               R    +++ +Y+ AI DY  AL+ 
Sbjct: 377 AYENRGDARYSLKDYQGAISDYTQALNF 404



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 73/139 (52%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E L+  G ++A     E AI+ +   +Q +P+  +A+ +RG A     +   AI D+++ 
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           ++  PN++     RG+     +D   A+ED S  ++LD E   AY   G   + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359

Query: 536 AEEAHLKAIQLDRNFLEAW 554
           A   + +AI+LD +   A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I+  +S S+ F   RG A+     Y  +IS +++ +K +P Y  A   R  AR    E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
            AI D  +AI  NP    A+  RG   +   ++  EA++D ++A+  +P       ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYHIAYFERGL 615

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           ++ +  D   A+ D +  ++L  +  +AY   GL+   +GE  KA E   KA +L
Sbjct: 616 IHRELGDNRGAINDHTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 5/155 (3%)

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
           LG++ ++ G Y++A  A+ + +Q+  N ++A+      Y +    + A+  + +V+ ++ 
Sbjct: 245 LGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNP 304

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
             S+AY  RGL       ++ A++D S  + +DP        R + Y  +GEY++AI DY
Sbjct: 305 NNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDY 364

Query: 643 DAALDLELDSMEKF-----VLQCLAFYQKEIALYT 672
             A+ L+ D    +         L  YQ  I+ YT
Sbjct: 365 TEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYT 399



 Score = 53.5 bits (127), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 16/266 (6%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG      G+Y  AI  + + ++ DP    A   RG AR   ++ + AISD+T+A+   
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
             +G  ++ R   R   G+ +     ++K  E  P      IL +  I        N + 
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458

Query: 504 EDLSACV--KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           EDL      ++  E+ +  T L L     G++         A+    +     G+   + 
Sbjct: 459 EDLVELTVNQMSSESVTQVT-LKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYL 517

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           +D   S   +    + +  + +++ AY  R      LG+H++AIKDL+  + ++P +   
Sbjct: 518 KDYKGS---ISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARA 574

Query: 622 LYLRASCY-HAIGEYREAIKDYDAAL 646
            +LR   + +    Y+EA+KDY+ A+
Sbjct: 575 YFLRGWIHSNRFKAYQEALKDYNQAI 600



 Score = 40.8 bits (94), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 14/158 (8%)

Query: 360 NEA-KRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           NEA KRN K+              +R  R  A+   G++  AI   +Q +  +P    A 
Sbjct: 528 NEAIKRNPKYAAA-----------YR-ERADARDELGEHQEAIKDLNQAISLNPKDARAY 575

Query: 419 IGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
             RG   + + +  + A+ D+ +AI ++P    A+  RG     LG++  AI D ++ + 
Sbjct: 576 FLRGWIHSNRFKAYQEALKDYNQAILNDPQYHIAYFERGLIHRELGDNRGAINDHTQVIR 635

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
             P+ A+  + RG+      +   A+ED     +L K+
Sbjct: 636 LVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAELYKQ 673


>gi|239947451|ref|ZP_04699204.1| tetratricopeptide repeat-containing protein [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239921727|gb|EER21751.1| tetratricopeptide repeat-containing protein [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 388

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 122/235 (51%), Gaps = 5/235 (2%)

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           IQ      E +   G+A   LG+  EA+++ + A++++P+ AD  + +G++  K   +  
Sbjct: 42  IQDQNILAEEYFNIGRAFYKLGKYKEAVKNFNLAIQYKPHYADAYNYQGMILAKLGKYEE 101

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+++    +K + +   AY   G++   +G+Y++A   +  AI+   NF   + +     
Sbjct: 102 AIKNYDLAIKYEFDFAEAYNNKGVSYKKLGKYQEAIALYNIAIKYKPNFAAVYNNKGDVL 161

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
             L   ++A+  +   L  + ++ +AY+ +G+ L  LGQ+++AI++ +  +   P     
Sbjct: 162 NSLGKYQEAINNVDLALNYNLKYPEAYYNKGISLINLGQYQEAIENCNLAIKYKPDYANA 221

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIALY 671
            Y +A+    +G+Y+EAIK +D A+  +LD     +++ + L  L  Y++ I  Y
Sbjct: 222 YYNKATSLMHLGKYQEAIKSFDLAIKYKLDDEATYNLKGYTLSMLGKYEEAIKNY 276



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 137/277 (49%), Gaps = 6/277 (2%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           F + R   ++  GKY  A+  F+  ++  P Y +A   +G   A   + E AI ++  AI
Sbjct: 53  FNIGRAFYKL--GKYKEAVKNFNLAIQYKPHYADAYNYQGMILAKLGKYEEAIKNYDLAI 110

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +      EA+  +G +   LG+  EAI   + A++++PN A + + +G V      +  A
Sbjct: 111 KYEFDFAEAYNNKGVSYKKLGKYQEAIALYNIAIKYKPNFAAVYNNKGDVLNSLGKYQEA 170

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + ++   +  + +   AY   G++L ++G+Y++A E    AI+   ++  A+ +      
Sbjct: 171 INNVDLALNYNLKYPEAYYNKGISLINLGQYQEAIENCNLAIKYKPDYANAYYNKATSLM 230

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK--DLSSGLGIDPSNIE 620
            L   ++A++     +         Y+L+G  L  LG++++AIK  DL+    ++ +   
Sbjct: 231 HLGKYQEAIKSFDLAIKYKLDDEATYNLKGYTLSMLGKYEEAIKNYDLAINHKLNHAAAY 290

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           C   + + +  +G+Y EAIK+YD A+  + D  E ++
Sbjct: 291 CN--KGASFRKLGQYEEAIKNYDLAIKYQSDYSESYL 325



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 118/235 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G++    GKY  AI++++  +K  P +      +G       + + AI++   A+  N
Sbjct: 122 NKGVSYKKLGKYQEAIALYNIAIKYKPNFAAVYNNKGDVLNSLGKYQEAINNVDLALNYN 181

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EA+  +G +   LG+  EAI++ + A++++P+ A+  + +         +  A++ 
Sbjct: 182 LKYPEAYYNKGISLINLGQYQEAIENCNLAIKYKPDYANAYYNKATSLMHLGKYQEAIKS 241

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K   ++++ Y   G  LS +G+Y++A + +  AI    N   A+ +    ++ L 
Sbjct: 242 FDLAIKYKLDDEATYNLKGYTLSMLGKYEEAIKNYDLAINHKLNHAAAYCNKGASFRKLG 301

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
             E+A++     +     +S++Y  +G++L  LG+HK+A K+ +  L   P+ IE
Sbjct: 302 QYEEAIKNYDLAIKYQSDYSESYLEKGIVLVNLGKHKEATKNFNLALKYRPNLIE 356



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 2/195 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI+ +N G+Y  AI   +  +K  P Y  A   + T+     + + AI  F  AI+  
Sbjct: 190 NKGISLINLGQYQEAIENCNLAIKYKPDYANAYYNKATSLMHLGKYQEAIKSFDLAIKYK 249

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                 +  +G   + LG+  EAI++   A+  + N A     +G    K   +  A+++
Sbjct: 250 LDDEATYNLKGYTLSMLGKYEEAIKNYDLAINHKLNHAAAYCNKGASFRKLGQYEEAIKN 309

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K   +   +Y   G+ L ++G++K+A +    A++   N +E +  + +  + L 
Sbjct: 310 YDLAIKYQSDYSESYLEKGIVLVNLGKHKEATKNFNLALKYRPNLIEEYEKIIKGLRKLG 369

Query: 566 NSEKA--LECLQQVL 578
           NS  A  LE   Q+L
Sbjct: 370 NSSMADYLEEKLQIL 384


>gi|313203959|ref|YP_004042616.1| hypothetical protein Palpr_1485 [Paludibacter propionicigenes WB4]
 gi|312443275|gb|ADQ79631.1| Tetratricopeptide TPR_1 repeat-containing protein [Paludibacter
           propionicigenes WB4]
          Length = 591

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 99/205 (48%)

Query: 411 DPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQ 470
           DP      + RG A   + + E A  D ++AI+ N +   A+  R +     GE+ +A  
Sbjct: 28  DPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSNNAYAYNLRARVFVKRGENEKAEV 87

Query: 471 DLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
           +  KA++ +PN  +  + RG+     K    A+ED    V+L   +   Y   G+A + +
Sbjct: 88  EFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFDKAVELKPNSAYIYNNRGIAWTKL 147

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
            E +KA   + + ++LD N++  + +    +  L   +KAL+   + + +D  F+ AY  
Sbjct: 148 DEDEKAMVDYNRTLELDSNYVFTYNNRGNLWLKLGEIDKALKDYNKAIELDSNFANAYRN 207

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGID 615
           RG+L   +G +  AI++    + +D
Sbjct: 208 RGILYFKIGNYDNAIENFQKAISLD 232



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 5/227 (2%)

Query: 363 KRNKKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEA 417
           ++NK      +   KSIS+D       L RG A   E ++  A     + ++ +     A
Sbjct: 9   RKNKDLQKAFLLAEKSISIDPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSNNAYA 68

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
              R      + E E A  +F +AI  +P+   A+  RG     L +  +AI+D  KA+E
Sbjct: 69  YNLRARVFVKRGENEKAEVEFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFDKAVE 128

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
            +PNSA I + RGI   K  +   A+ D +  ++LD      Y   G     +GE  KA 
Sbjct: 129 LKPNSAYIYNNRGIAWTKLDEDEKAMVDYNRTLELDSNYVFTYNNRGNLWLKLGEIDKAL 188

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           + + KAI+LD NF  A+ +    Y  + N + A+E  Q+ + +D+ F
Sbjct: 189 KDYNKAIELDSNFANAYRNRGILYFKIGNYDNAIENFQKAISLDEGF 235



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 89/176 (50%)

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           K++  +P ++    +RG   F+   F  A ED S  ++L+  N  AY          GE 
Sbjct: 23  KSISIDPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSNNAYAYNLRARVFVKRGEN 82

Query: 534 KKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
           +KAE    KAI LD N++ A+     F+ DL   EKA+E   + + +    +  Y+ RG+
Sbjct: 83  EKAEVEFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFDKAVELKPNSAYIYNNRGI 142

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
               L + +KA+ D +  L +D + +     R + +  +GE  +A+KDY+ A++L+
Sbjct: 143 AWTKLDEDEKAMVDYNRTLELDSNYVFTYNNRGNLWLKLGEIDKALKDYNKAIELD 198



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 2/240 (0%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++L+ A     ++I  +P     + +RG A     +  +A +D SKA+E   N+A   + 
Sbjct: 12  KDLQKAFLLAEKSISIDPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSNNAYAYNL 71

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           R  V  K  +   A  +    + LD    +AY   G+  + + + +KA E   KA++L  
Sbjct: 72  RARVFVKRGENEKAEVEFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFDKAVELKP 131

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N    + +    +  L   EKA+    + L +D  +   Y+ RG L   LG+  KA+KD 
Sbjct: 132 NSAYIYNNRGIAWTKLDEDEKAMVDYNRTLELDSNYVFTYNNRGNLWLKLGEIDKALKDY 191

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEI 668
           +  + +D +       R   Y  IG Y  AI+++  A+   LD   KF+   +   Q++I
Sbjct: 192 NKAIELDSNFANAYRNRGILYFKIGNYDNAIENFQKAIS--LDEGFKFLEDKIKLAQEKI 249



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 77/157 (49%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+   +  +   AI  FD+ ++  P        RG A     E E A+ D+   ++ +
Sbjct: 105 ARGVFFTDLKQCEKAIEDFDKAVELKPNSAYIYNNRGIAWTKLDEDEKAMVDYNRTLELD 164

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +    +  RG     LGE  +A++D +KA+E + N A+    RGI+ FK  +++ A+E+
Sbjct: 165 SNYVFTYNNRGNLWLKLGEIDKALKDYNKAIELDSNFANAYRNRGILYFKIGNYDNAIEN 224

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
               + LD+  K     + LA   I E ++  E++++
Sbjct: 225 FQKAISLDEGFKFLEDKIKLAQEKINEQRQFNESNVE 261



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 73/160 (45%)

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           GI   K KD   A       + +D  N   Y   G A     +++KA E   KAI+L+ N
Sbjct: 5   GIFERKNKDLQKAFLLAEKSISIDPYNSFGYLQRGGAYFQEDQFEKAFEDASKAIELNSN 64

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
              A+    + +     +EKA    ++ + +D  +  AY+ RG+    L Q +KAI+D  
Sbjct: 65  NAYAYNLRARVFVKRGENEKAEVEFKKAIDLDPNYVNAYNARGVFFTDLKQCEKAIEDFD 124

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
             + + P++      R   +  + E  +A+ DY+  L+L+
Sbjct: 125 KAVELKPNSAYIYNNRGIAWTKLDEDEKAMVDYNRTLELD 164


>gi|124023494|ref|YP_001017801.1| hypothetical protein P9303_17941 [Prochlorococcus marinus str. MIT
           9303]
 gi|123963780|gb|ABM78536.1| TPR repeat [Prochlorococcus marinus str. MIT 9303]
          Length = 404

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 39/293 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  +   G Y SA++ +++ +  + +     I RG  +     +E AI D+T+AI+ +
Sbjct: 62  NRGNVKDELGDYQSAMNDYNKAIDINSLDASFYINRGVVKRHSNNIEGAIDDYTKAIELD 121

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+  RG A+  L ++  AI D +KAL   P  A   + R I      D   A+ D
Sbjct: 122 PQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAKSYYNRAISKNNINDIKGAISD 181

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL------------------- 546
            +  ++      SAY   G  +  +G  + A   H KA+ +                   
Sbjct: 182 YTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEKALVIKPQLLTAMNERGENKNLVE 241

Query: 547 -----------DRNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL 593
                      DR+ L+A+ + +Q    Q   N++ A++C  + + ++  +++AY+ RGL
Sbjct: 242 NKIVNDLNNEEDRSQLDAFNYYSQGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGL 301

Query: 594 LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
             + L  ++ A+ D +  + I+        +    Y   G  + A+ DY  A+
Sbjct: 302 ANYNLCDYQAALDDYNKAIEINS-------IYEDAYIGCGLAKSALSDYQGAI 347



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 11/281 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA+VN      AI  + + L  +P + ++   R  ++    +++ AISD+T+AI++ 
Sbjct: 130 NRGIAKVNLSDNKGAIFDYTKALTVNPRHAKSYYNRAISKNNINDIKGAISDYTKAIEAM 189

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF--NAAV 503
           P    A+  RG     LG    A+ D  KAL  +P     ++ERG    + K+   N  V
Sbjct: 190 PVFASAYYNRGNLMERLGRRQAAVTDHEKALVIKPQLLTAMNERG----ENKNLVENKIV 245

Query: 504 EDLSACVKLDKENKSAYTYL--GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
            DL+   + D+    A+ Y   G A    G  + A + + KAI+++ ++ EA+ +     
Sbjct: 246 NDLNN--EEDRSQLDAFNYYSQGNAEQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGLAN 303

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L + + AL+   + + I+  +  AY   GL    L  ++ AI      L I+P N+  
Sbjct: 304 YNLCDYQAALDDYNKAIEINSIYEDAYIGCGLAKSALSDYQGAIGAYERVLVINPKNVAA 363

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL-ELDSMEKFVLQCL 661
              R       G    A  D+  A  L + D+ E    QC 
Sbjct: 364 YRNRGIAKELEGNLEGACSDWRQASSLGDEDAAEWVKAQCF 404



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 97/195 (49%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G  R   ++ + AI  +++AI+ NP+   A+  RG  +  LG+   A+ D +KA++    
Sbjct: 30  GEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNRGNVKDELGDYQSAMNDYNKAIDINSL 89

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A     RG+V     +   A++D +  ++LD ++ +AY   G+A  ++ + K A   + 
Sbjct: 90  DASFYINRGVVKRHSNNIEGAIDDYTKAIELDPQHATAYYNRGIAKVNLSDNKGAIFDYT 149

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           KA+ ++    +++ +      ++ + + A+    + +     F+ AY+ RG L+  LG+ 
Sbjct: 150 KALTVNPRHAKSYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMERLGRR 209

Query: 602 KKAIKDLSSGLGIDP 616
           + A+ D    L I P
Sbjct: 210 QAAVTDHEKALVIKP 224



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 93/195 (47%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           + + G+ R  L +   AI   SKA+E  PN+A   + RG V  +  D+ +A+ D +  + 
Sbjct: 26  YFKEGEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNRGNVKDELGDYQSAMNDYNKAID 85

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           ++  + S Y   G+        + A + + KAI+LD     A+ +      +L++++ A+
Sbjct: 86  INSLDASFYINRGVVKRHSNNIEGAIDDYTKAIELDPQHATAYYNRGIAKVNLSDNKGAI 145

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
               + L ++ R +K+Y+ R +  + +   K AI D +  +   P      Y R +    
Sbjct: 146 FDYTKALTVNPRHAKSYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMER 205

Query: 632 IGEYREAIKDYDAAL 646
           +G  + A+ D++ AL
Sbjct: 206 LGRRQAAVTDHEKAL 220



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 90/187 (48%), Gaps = 6/187 (3%)

Query: 464 ESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYL 523
           E+ EA+ + S        +A+   + G   F  KD+  A++  S  ++++  N  AY   
Sbjct: 4   ETPEAMANESSNHSVSEQTANDYFKEGEKRFHLKDYQGAIDCYSKAIEINPNNAIAYNNR 63

Query: 524 GLALSSIGEYKKAEEAHLKAI---QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
           G     +G+Y+ A   + KAI    LD +F    G + +   ++   E A++   + + +
Sbjct: 64  GNVKDELGDYQSAMNDYNKAIDINSLDASFYINRGVVKRHSNNI---EGAIDDYTKAIEL 120

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
           D + + AY+ RG+    L  +K AI D +  L ++P + +  Y RA   + I + + AI 
Sbjct: 121 DPQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRHAKSYYNRAISKNNINDIKGAIS 180

Query: 641 DYDAALD 647
           DY  A++
Sbjct: 181 DYTKAIE 187



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 128/314 (40%), Gaps = 41/314 (13%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI  + + ++ +P    A   RG  +    + ++A++D+ +AI  N      +  RG
Sbjct: 39  YQGAIDCYSKAIEINPNNAIAYNNRGNVKDELGDYQSAMNDYNKAIDINSLDASFYINRG 98

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
             +        AI D +KA+E +P  A   + RGI      D   A+ D +  + ++  +
Sbjct: 99  VVKRHSNNIEGAIDDYTKAIELDPQHATAYYNRGIAKVNLSDNKGAIFDYTKALTVNPRH 158

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             +Y    ++ ++I + K A   + KAI+    F  A+ +     + L   + A+   ++
Sbjct: 159 AKSYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMERLGRRQAAVTDHEK 218

Query: 577 VLYIDKRFSKAYHLRG--------LLLHGL------------------------GQHKKA 604
            L I  +   A + RG         +++ L                        G ++ A
Sbjct: 219 ALVIKPQLLTAMNERGENKNLVENKIVNDLNNEEDRSQLDAFNYYSQGNAEQKRGNNQSA 278

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM-EKFVLQC--- 660
           I   +  + ++P   E    R    + + +Y+ A+ DY+ A  +E++S+ E   + C   
Sbjct: 279 IDCYTKAIEVNPHYAEAYNYRGLANYNLCDYQAALDDYNKA--IEINSIYEDAYIGCGLA 336

Query: 661 ---LAFYQKEIALY 671
              L+ YQ  I  Y
Sbjct: 337 KSALSDYQGAIGAY 350



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 37/216 (17%)

Query: 376 SKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +K+++V+ R      +R I++ N      AIS + + ++  P++  A   RG        
Sbjct: 149 TKALTVNPRHAKSYYNRAISKNNINDIKGAISDYTKAIEAMPVFASAYYNRGNLMERLGR 208

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQ--------------------------------A 458
            +AA++D  +A+   P    A   RG+                                A
Sbjct: 209 RQAAVTDHEKALVIKPQLLTAMNERGENKNLVENKIVNDLNNEEDRSQLDAFNYYSQGNA 268

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
               G +  AI   +KA+E  P+ A+  + RG+ N+   D+ AA++D +  ++++   + 
Sbjct: 269 EQKRGNNQSAIDCYTKAIEVNPHYAEAYNYRGLANYNLCDYQAALDDYNKAIEINSIYED 328

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           AY   GLA S++ +Y+ A  A+ + + ++   + A+
Sbjct: 329 AYIGCGLAKSALSDYQGAIGAYERVLVINPKNVAAY 364


>gi|425471352|ref|ZP_18850212.1| exported hypothetical protein [Microcystis aeruginosa PCC 9701]
 gi|389882767|emb|CCI36788.1| exported hypothetical protein [Microcystis aeruginosa PCC 9701]
          Length = 695

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 136/318 (42%), Gaps = 27/318 (8%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
              R+ +    +VD  L RGIA + + KY +AI+   +++K +P    A   RG AR + 
Sbjct: 261 AYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNPNNSRAYFWRGLARDYS 320

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + A+ D++ AI+ +P    A+  RG   A LGE  +AI D ++A+  +P+       
Sbjct: 321 EDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYEN 380

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY------LGLALSSIGEYKKAEEAHL- 541
           RG   +  KD+  A+ D +  +   + +   + Y       GL ++ I E   A +  L 
Sbjct: 381 RGDARYSLKDYQGAISDYTQALNFLEYSGLGFQYRRHESGQGLIITKIFENSPAFKQGLI 440

Query: 542 -----KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK-------------- 582
                 AI       ++   L +   +  +SE   +   ++   D+              
Sbjct: 441 LDDLIIAINGKSTLNKSAEDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAV 500

Query: 583 -RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
            R +  Y  RG   + L  +K +I D +  +  +P        RA     +GE++EAIKD
Sbjct: 501 PRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKD 560

Query: 642 YDAALDLELDSMEKFVLQ 659
            + A+ L       + L+
Sbjct: 561 LNQAISLNPKDARAYFLR 578



 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 5/178 (2%)

Query: 404 FDQIL-KEDPMYPEA---LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           FD  L KE+   P +     GRG AR + ++ + +ISD+ EAI+ NP    A++ R  AR
Sbjct: 489 FDVTLTKENIAVPRSASIYFGRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADAR 548

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKENKS 518
             LGE  EAI+DL++A+   P  A     RG I + +FK +  A++D +  +  D + + 
Sbjct: 549 DELGEHQEAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRI 608

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
           AY   GL    +G+ + A   + + I+L  ++  A+ +    Y+DL    KALE  ++
Sbjct: 609 AYFERGLIHRELGDNRGAINDYTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKK 666



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 4/176 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+ GI++ N G Y  AI+ ++++L+  P   +A + RG A   Q + +AAI+D TE I+ 
Sbjct: 243 LTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKL 302

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+   A+  RG AR    ++  A++D S A+  +P  +   + RG V  +  ++  A+ 
Sbjct: 303 NPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAIL 362

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           D +  ++LD +   AY   G A  S+ +Y+ A   + +A+    NFLE  G   Q+
Sbjct: 363 DYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQAL----NFLEYSGLGFQY 414



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 35/208 (16%)

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+   P+A E     G ++A  G   EAI   ++ L+  PN+ D   +RGI   +   + 
Sbjct: 232 AVALQPTA-EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQ 290

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
           AA+ D++  +KL+  N  AY + GLA                     R++ E        
Sbjct: 291 AAIADMTEVIKLNPNNSRAYFWRGLA---------------------RDYSE-------- 321

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
                +++ ALE     + +D  +S AY+ RG +   LG+++KAI D +  + +DP    
Sbjct: 322 -----DNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDYTEAIRLDPDVFL 376

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
               R    +++ +Y+ AI DY  AL+ 
Sbjct: 377 AYENRGDARYSLKDYQGAISDYTQALNF 404



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 73/139 (52%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E L+  G ++A     E AI+ +   +Q +P+  +A+ +RG A     +   AI D+++ 
Sbjct: 240 EDLLTLGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEV 299

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           ++  PN++     RG+     +D   A+ED S  ++LD E   AY   G   + +GEY+K
Sbjct: 300 IKLNPNNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQK 359

Query: 536 AEEAHLKAIQLDRNFLEAW 554
           A   + +AI+LD +   A+
Sbjct: 360 AILDYTEAIRLDPDVFLAY 378



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 3/175 (1%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           I+  +S S+ F   RG A+     Y  +IS +++ +K +P Y  A   R  AR    E +
Sbjct: 498 IAVPRSASIYF--GRGNARYYLKDYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQ 555

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFEPNSADILHERGI 491
            AI D  +AI  NP    A+  RG   +   ++  EA++D ++A+  +P       ERG+
Sbjct: 556 EAIKDLNQAISLNPKDARAYFLRGWIHSNRFKAYQEALKDYNQAILNDPQYRIAYFERGL 615

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           ++ +  D   A+ D +  ++L  +  +AY   GL+   +GE  KA E   KA +L
Sbjct: 616 IHRELGDNRGAINDYTQVIRLVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAEL 670



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 69/129 (53%)

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
           LG++ ++ G Y++A  A+ + +Q+  N ++A+      Y +    + A+  + +V+ ++ 
Sbjct: 245 LGISKANSGNYEEAIAAYNRVLQISPNNVDAYLQRGIAYIEQNKYQAAIADMTEVIKLNP 304

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
             S+AY  RGL       ++ A++D S  + +DP        R + Y  +GEY++AI DY
Sbjct: 305 NNSRAYFWRGLARDYSEDNQGALEDYSHAIRLDPEYSGAYNNRGTVYAELGEYQKAILDY 364

Query: 643 DAALDLELD 651
             A+ L+ D
Sbjct: 365 TEAIRLDPD 373



 Score = 53.9 bits (128), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 72/313 (23%), Positives = 131/313 (41%), Gaps = 42/313 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG      G+Y  AI  + + ++ DP    A   RG AR   ++ + AISD+T+A+   
Sbjct: 346 NRGTVYAELGEYQKAILDYTEAIRLDPDVFLAYENRGDARYSLKDYQGAISDYTQALNFL 405

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP--NSADILHERGIVNFKFKDFNAAV 503
             +G  ++ R   R   G+ +     ++K  E  P      IL +  I        N + 
Sbjct: 406 EYSGLGFQYR---RHESGQGL----IITKIFENSPAFKQGLILDDLIIAINGKSTLNKSA 458

Query: 504 EDLSAC--------------------------VKLDKEN----KSAYTYLGL--ALSSIG 531
           EDL                             V L KEN    +SA  Y G   A   + 
Sbjct: 459 EDLVELTVNQMSSESVTQVTLKLRRKDRGDFDVTLTKENIAVPRSASIYFGRGNARYYLK 518

Query: 532 EYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
           +YK +   + +AI+ +  +  A+        +L   ++A++ L Q + ++ + ++AY LR
Sbjct: 519 DYKGSISDYNEAIKRNPKYAAAYRERADARDELGEHQEAIKDLNQAISLNPKDARAYFLR 578

Query: 592 GLLL-HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           G +  +    +++A+KD +  +  DP      + R   +  +G+ R AI DY   + L  
Sbjct: 579 GWIHSNRFKAYQEALKDYNQAILNDPQYRIAYFERGLIHRELGDNRGAINDYTQVIRLVP 638

Query: 651 DSMEKFVLQCLAF 663
           D    +  + L++
Sbjct: 639 DWANAYYNRGLSY 651



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 14/158 (8%)

Query: 360 NEA-KRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           NEA KRN K+              +R  R  A+   G++  AI   +Q +  +P    A 
Sbjct: 528 NEAIKRNPKYAAA-----------YR-ERADARDELGEHQEAIKDLNQAISLNPKDARAY 575

Query: 419 IGRGTARAFQ-RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
             RG   + + +  + A+ D+ +AI ++P    A+  RG     LG++  AI D ++ + 
Sbjct: 576 FLRGWIHSNRFKAYQEALKDYNQAILNDPQYRIAYFERGLIHRELGDNRGAINDYTQVIR 635

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
             P+ A+  + RG+      +   A+ED     +L K+
Sbjct: 636 LVPDWANAYYNRGLSYRDLGEKPKALEDFKKAAELYKQ 673


>gi|237722138|ref|ZP_04552619.1| tetratricopeptide repeat family protein [Bacteroides sp. 2_2_4]
 gi|229447948|gb|EEO53739.1| tetratricopeptide repeat family protein [Bacteroides sp. 2_2_4]
          Length = 676

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD+NAA EDL + +K+    
Sbjct: 98  LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYNAAKEDLESLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            + +A+  LQQ
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------AARAIVKLQQ 205

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F++A  L          R L        + A+ D    L IDP+N    Y 
Sbjct: 206 AKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 265

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 266 RGLLRAQVGDDNRAIEDFDFVIKMEPDNM 294



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A + F++ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K  E+   K +  Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGVEQDEFKVMKAQIDK 361



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A +DF  AI  
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNRAIPL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 282 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 115/286 (40%), Gaps = 16/286 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D+T  I   
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    + +R +AR  +G+     QD     EF+   A I  + G+ N           D
Sbjct: 325 PNFLAGYYQRSEARRKIGDKKGVEQD-----EFKVMKAQIDKQNGVTNKDVAQNKDKEND 379

Query: 506 LSACVKLDKE-NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF---LEAWGHLTQFY 561
                K  K+ +K+   Y  + ++   E ++   +  +    D+N    LE    LT +Y
Sbjct: 380 EEGGEKTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNITLEPMFALT-YY 438

Query: 562 QDLA------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           + ++      N  K +E L +   + KR         L    +  H   I   +S +  D
Sbjct: 439 EKMSDVKRSVNFHKYIEDLNRTGILPKRLRITNMEAPLTEEQVKVHFALIDTHTSAIVED 498

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             N    + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 499 DKNASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 544



 Score = 45.1 bits (105), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AI+ NP   +A+  RG     LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 644

Query: 464 ESVEAIQDLSKALEF 478
            +   I DLSKA E 
Sbjct: 645 NNKLGISDLSKAGEL 659



 Score = 43.1 bits (100), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D     +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGVEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 350 DEFKVMKAQIDKQN 363


>gi|428312302|ref|YP_007123279.1| hypothetical protein Mic7113_4172 [Microcoleus sp. PCC 7113]
 gi|428253914|gb|AFZ19873.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
          Length = 270

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 7/198 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ ++N G Y  AI+ FDQ L+ D    +    RG A       E AI+D+TEAI+ N
Sbjct: 50  NRGVDKLNAGNYQGAIADFDQALQLDSKDADTYYNRGYAYHTIGSYEKAITDYTEAIRLN 109

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   +A+  RG     L    ++I D +KA+E   +S +    RG  + +  + +AA+ D
Sbjct: 110 PKFAQAYSNRGYTYFVLKNYQQSIADATKAIELNQSSDNAYVSRGNAHDELGNHDAALAD 169

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQF--- 560
               + L+  +  A+   GL  + + +++ A + + +AI++   F EA+ +  L++F   
Sbjct: 170 YEKALSLNPNSARAFYNRGLTRNRLNQHQSAIQDYSQAIRIQPEFAEAYYNRGLSRFTLK 229

Query: 561 -YQD-LANSEKALECLQQ 576
            YQD +A+ +KA E  +Q
Sbjct: 230 NYQDAIADLKKAAELFKQ 247



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 34/231 (14%)

Query: 418 LIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALE 477
           L  RG  +      + AI+DF +A+Q +    + +  RG A   +G   +AI D ++A+ 
Sbjct: 48  LYNRGVDKLNAGNYQGAIADFDQALQLDSKDADTYYNRGYAYHTIGSYEKAITDYTEAIR 107

Query: 478 FEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAE 537
             P  A     RG   F  K++  ++ D +  ++L++ + +AY   G A   +G +  A 
Sbjct: 108 LNPKFAQAYSNRGYTYFVLKNYQQSIADATKAIELNQSSDNAYVSRGNAHDELGNHDAA- 166

Query: 538 EAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHG 597
                                     LA+ EKAL        ++   ++A++ RGL  + 
Sbjct: 167 --------------------------LADYEKALS-------LNPNSARAFYNRGLTRNR 193

Query: 598 LGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           L QH+ AI+D S  + I P   E  Y R      +  Y++AI D   A +L
Sbjct: 194 LNQHQSAIQDYSQAIRIQPEFAEAYYNRGLSRFTLKNYQDAIADLKKAAEL 244



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/169 (29%), Positives = 82/169 (48%)

Query: 378 SISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISD 437
           S   D   +RG A    G Y  AI+ + + ++ +P + +A   RG      +  + +I+D
Sbjct: 76  SKDADTYYNRGYAYHTIGSYEKAITDYTEAIRLNPKFAQAYSNRGYTYFVLKNYQQSIAD 135

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
            T+AI+ N S+  A+  RG A   LG    A+ D  KAL   PNSA   + RG+   +  
Sbjct: 136 ATKAIELNQSSDNAYVSRGNAHDELGNHDAALADYEKALSLNPNSARAFYNRGLTRNRLN 195

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
              +A++D S  +++  E   AY   GL+  ++  Y+ A     KA +L
Sbjct: 196 QHQSAIQDYSQAIRIQPEFAEAYYNRGLSRFTLKNYQDAIADLKKAAEL 244



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 47/191 (24%), Positives = 94/191 (49%), Gaps = 7/191 (3%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           SA  L+ RG+      ++  A+ D    ++LD ++   Y   G A  +IG Y+KA   + 
Sbjct: 44  SAVELYNRGVDKLNAGNYQGAIADFDQALQLDSKDADTYYNRGYAYHTIGSYEKAITDYT 103

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
           +AI+L+  F +A+ +    Y  L N ++++    + + +++    AY  RG     LG H
Sbjct: 104 EAIRLNPKFAQAYSNRGYTYFVLKNYQQSIADATKAIELNQSSDNAYVSRGNAHDELGNH 163

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             A+ D    L ++P++    Y R    + + +++ AI+DY  A+ ++ +  E       
Sbjct: 164 DAALADYEKALSLNPNSARAFYNRGLTRNRLNQHQSAIQDYSQAIRIQPEFAE------- 216

Query: 662 AFYQKEIALYT 672
           A+Y + ++ +T
Sbjct: 217 AYYNRGLSRFT 227



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 67/137 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG        Y  +I+   + ++ +     A + RG A       +AA++D+ +A+  N
Sbjct: 118 NRGYTYFVLKNYQQSIADATKAIELNQSSDNAYVSRGNAHDELGNHDAALADYEKALSLN 177

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P++  A+  RG  R  L +   AIQD S+A+  +P  A+  + RG+  F  K++  A+ D
Sbjct: 178 PNSARAFYNRGLTRNRLNQHQSAIQDYSQAIRIQPEFAEAYYNRGLSRFTLKNYQDAIAD 237

Query: 506 LSACVKLDKENKSAYTY 522
           L    +L K+N     Y
Sbjct: 238 LKKAAELFKQNGRTDNY 254



 Score = 41.6 bits (96), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 6/82 (7%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           ++ ++++AIR L+   AQ+Y      NR + Y  L+ ++  I D  KA++L+ +   AY+
Sbjct: 98  AITDYTEAIR-LNPKFAQAYS-----NRGYTYFVLKNYQQSIADATKAIELNQSSDNAYV 151

Query: 108 LKGCAFSALGRKEEALSVWEKG 129
            +G A   LG  + AL+ +EK 
Sbjct: 152 SRGNAHDELGNHDAALADYEKA 173


>gi|196232370|ref|ZP_03131223.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
 gi|196223442|gb|EDY17959.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
           Ellin428]
          Length = 779

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 119/270 (44%), Gaps = 2/270 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A  ++GK   A++ F + +   P Y EA    G       +L+ AI+ +  AI+  
Sbjct: 59  NRGNALRSQGKLEEALAAFCKAIVLKPEYAEAYYNMGITMMECGKLDQAINAYACAIRYK 118

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA    G A A  G    A+    +A++  PN A+  +  G    K      A+  
Sbjct: 119 PDFAEAHNNLGNAEARRGHFESAVAAYRRAIQIRPNYAEAFNNLGTALSKAGQSAEAITA 178

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL-TQFYQDL 564
               + L  +   AY  LG+AL+     ++A +A+ +A++L+ N  + W +L T   +  
Sbjct: 179 YLNAISLKPQFPEAYHNLGMALAEQRRLEEATQAYRRALELNSNAPQPWNNLGTTLIEQG 238

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             +E A  C    L +D  F+ A    G+ L GL +  +AI    S L + P N    + 
Sbjct: 239 LFTEGATAC-NHALALDPDFADAQSNLGVALAGLNRFAEAIAAFRSALQLQPDNATVHFN 297

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSME 654
             + +       +A+ +Y  AL LE   ME
Sbjct: 298 LGNVFRDQRNLDQAVDEYQRALTLEPMFME 327



 Score = 69.7 bits (169), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 3/243 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A+   G + SA++ + + ++  P Y EA    GTA +   +   AI+ +  AI   P 
Sbjct: 129 GNAEARRGHFESAVAAYRRAIQIRPNYAEAFNNLGTALSKAGQSAEAITAYLNAISLKPQ 188

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA+   G A A      EA Q   +ALE   N+    +  G    +   F       +
Sbjct: 189 FPEAYHNLGMALAEQRRLEEATQAYRRALELNSNAPQPWNNLGTTLIEQGLFTEGATACN 248

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + LD +   A + LG+AL+ +  + +A  A   A+QL  +      +L   ++D  N 
Sbjct: 249 HALALDPDFADAQSNLGVALAGLNRFAEAIAAFRSALQLQPDNATVHFNLGNVFRDQRNL 308

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           ++A++  Q+ L ++  F +A    G +    G+  +A+     GL    SN    +LR++
Sbjct: 309 DQAVDEYQRALTLEPMFMEAITNLGNVFRDCGKVNEALAIYRRGLS---SNSSVTHLRSN 365

Query: 628 CYH 630
             +
Sbjct: 366 IIY 368



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%)

Query: 422 GTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN 481
           G + A Q   + AI+ +  AI   P   EA   RG A  + G+  EA+    KA+  +P 
Sbjct: 27  GNSLAAQGRTDEAIAAYDHAILLKPDYTEAHYNRGNALRSQGKLEEALAAFCKAIVLKPE 86

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
            A+  +  GI   +    + A+   +  ++   +   A+  LG A +  G ++ A  A+ 
Sbjct: 87  YAEAYYNMGITMMECGKLDQAINAYACAIRYKPDFAEAHNNLGNAEARRGHFESAVAAYR 146

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           +AIQ+  N+ EA+ +L         S +A+      + +  +F +AYH  G+ L
Sbjct: 147 RAIQIRPNYAEAFNNLGTALSKAGQSAEAITAYLNAISLKPQFPEAYHNLGMAL 200



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 14/215 (6%)

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           AI  NP    A+   G + AA G + EAI     A+  +P+  +  + RG          
Sbjct: 12  AIALNPEDAAAYSNLGNSLAAQGRTDEAIAAYDHAILLKPDYTEAHYNRGNALRSQGKLE 71

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+      + L  E   AY  +G+ +   G+  +A  A+  AI+   +F EA  +L   
Sbjct: 72  EALAAFCKAIVLKPEYAEAYYNMGITMMECGKLDQAINAYACAIRYKPDFAEAHNNLGNA 131

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
                + E A+   ++ + I   +++A++  G  L   GQ  +AI    + + + P   E
Sbjct: 132 EARRGHFESAVAAYRRAIQIRPNYAEAFNNLGTALSKAGQSAEAITAYLNAISLKPQFPE 191

Query: 621 CLYLRASCYHAIG-------EYREAIKDYDAALDL 648
                   YH +G          EA + Y  AL+L
Sbjct: 192 -------AYHNLGMALAEQRRLEEATQAYRRALEL 219


>gi|224023750|ref|ZP_03642116.1| hypothetical protein BACCOPRO_00466, partial [Bacteroides
           coprophilus DSM 18228]
 gi|224016972|gb|EEF74984.1| hypothetical protein BACCOPRO_00466 [Bacteroides coprophilus DSM
           18228]
          Length = 486

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 120/278 (43%), Gaps = 4/278 (1%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
            ++  +K    D    RG+A++N   Y  A     + L+ +P    A   RG +R  Q+ 
Sbjct: 49  NQVINAKPYLADPYFYRGLAKMNLDDYPGAERDCSEALERNPFVVNAYQVRGISRIRQKN 108

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI D+  A++ +P     W      R    +   A  +L   +   P   D    R 
Sbjct: 109 YKGAIEDYQRALKLDPENISLWHNLVLCRMQEKDYTTAQAELDTIIRISPRYTDAYLMRV 168

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
             + K KD   A+ D    +++D+ N   ++  G+      +YK AE    +AI+L    
Sbjct: 169 ENSLKLKDTLQAMNDADRAIEMDRYNPDTWSSRGMLFMMRSKYKDAESDLTEAIRLSLRN 228

Query: 551 LEAWGH--LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
             A+ +  L ++YQ+  N   A+      L ID+     ++ RGLL   +G   +AI+D 
Sbjct: 229 AGAYINRALARYYQN--NLRGAMSDYDLALDIDRNNFIGHYNRGLLRAQVGDDNRAIEDF 286

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
              L ++P N+  ++ R       G++R AI DY   L
Sbjct: 287 DFVLSVEPDNMMAVFNRGLLRDKTGDFRGAISDYSTVL 324



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 98/216 (45%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           +I  F + I + P   + +  RG A+  L +   A +D S+ALE  P   +    RGI  
Sbjct: 44  SIQYFNQVINAKPYLADPYFYRGLAKMNLDDYPGAERDCSEALERNPFVVNAYQVRGISR 103

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            + K++  A+ED    +KLD EN S +  L L      +Y  A+      I++   + +A
Sbjct: 104 IRQKNYKGAIEDYQRALKLDPENISLWHNLVLCRMQEKDYTTAQAELDTIIRISPRYTDA 163

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           +    +    L ++ +A+    + + +D+     +  RG+L     ++K A  DL+  + 
Sbjct: 164 YLMRVENSLKLKDTLQAMNDADRAIEMDRYNPDTWSSRGMLFMMRSKYKDAESDLTEAIR 223

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           +   N      RA   +     R A+ DYD ALD++
Sbjct: 224 LSLRNAGAYINRALARYYQNNLRGAMSDYDLALDID 259



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 2/164 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+  +   KY  A S   + ++       A I R  AR +Q  L  A+SD+  A+  +
Sbjct: 200 SRGMLFMMRSKYKDAESDLTEAIRLSLRNAGAYINRALARYYQNNLRGAMSDYDLALDID 259

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +       RG  RA +G+   AI+D    L  EP++   +  RG++  K  DF  A+ D
Sbjct: 260 RNNFIGHYNRGLLRAQVGDDNRAIEDFDFVLSVEPDNMMAVFNRGLLRDKTGDFRGAISD 319

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLD 547
            S  +    +  + Y Y   A    G+ K AEE   K +  QLD
Sbjct: 320 YSTVLAEYPDFLAGYQYRSQARRKTGDLKGAEEDEFKVLKAQLD 363



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 4/267 (1%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGI+++ +  Y  AI  + + LK DP            R  +++   A ++    I+ +P
Sbjct: 99  RGISRIRQKNYKGAIEDYQRALKLDPENISLWHNLVLCRMQEKDYTTAQAELDTIIRISP 158

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+  R +    L ++++A+ D  +A+E +  + D    RG++      +  A  DL
Sbjct: 159 RYTDAYLMRVENSLKLKDTLQAMNDADRAIEMDRYNPDTWSSRGMLFMMRSKYKDAESDL 218

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDL 564
           +  ++L   N  AY    LA       + A   +  A+ +DRN     GH  +      +
Sbjct: 219 TEAIRLSLRNAGAYINRALARYYQNNLRGAMSDYDLALDIDRN--NFIGHYNRGLLRAQV 276

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            +  +A+E    VL ++     A   RGLL    G  + AI D S+ L   P  +     
Sbjct: 277 GDDNRAIEDFDFVLSVEPDNMMAVFNRGLLRDKTGDFRGAISDYSTVLAEYPDFLAGYQY 336

Query: 625 RASCYHAIGEYREAIKDYDAALDLELD 651
           R+      G+ + A +D    L  +LD
Sbjct: 337 RSQARRKTGDLKGAEEDEFKVLKAQLD 363


>gi|332666951|ref|YP_004449739.1| hypothetical protein [Haliscomenobacter hydrossis DSM 1100]
 gi|332335765|gb|AEE52866.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 363

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/273 (24%), Positives = 126/273 (46%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           +  +  ++    D   +R +    E +Y  A++ + ++++ +P    A   RG    F  
Sbjct: 7   LNEVIATRPDYADAYFNRAVLYTQERRYEEALADYAKVIELNPTDTGAYNNRGNLYIFFN 66

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
             E AISDF  AI  N    +A+  R      +G   EA+ D   A+E       +   R
Sbjct: 67  RAEEAISDFNAAIALNEVDPDAYYNRAILFTEMGRLEEALADYDTAIEKNFQDPAVHFNR 126

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            +V  +  D+  A++DL+  +KL  ++  +Y       + + +Y++A + +  AI++  N
Sbjct: 127 AMVLLRQGDWENALDDLATTIKLRPDHADSYVARANVYTDLRKYQEALDDYSLAIRIRPN 186

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
           F  A  +       L   E+AL+   +VL I+ +   A+  RG LL  L ++ +A+ D S
Sbjct: 187 FFIAHFNRANLLYGLGYLEEALKDYSKVLEINPKEVNAWVSRGNLLDDLERYDEALADYS 246

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
             + + P+  +  + RA     +  Y EA++DY
Sbjct: 247 QAIELQPNGADARFNRAIVLKKLERYDEALEDY 279



 Score = 84.7 bits (208), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 113/249 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I   ++++   P Y +A   R      +R  E A++D+ + I+ NP+   A+  RG    
Sbjct: 4   IEELNEVIATRPDYADAYFNRAVLYTQERRYEEALADYAKVIELNPTDTGAYNNRGNLYI 63

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
               + EAI D + A+       D  + R I+  +      A+ D    ++ + ++ + +
Sbjct: 64  FFNRAEEAISDFNAAIALNEVDPDAYYNRAILFTEMGRLEEALADYDTAIEKNFQDPAVH 123

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
               + L   G+++ A +     I+L  +  +++      Y DL   ++AL+     + I
Sbjct: 124 FNRAMVLLRQGDWENALDDLATTIKLRPDHADSYVARANVYTDLRKYQEALDDYSLAIRI 183

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIK 640
              F  A+  R  LL+GLG  ++A+KD S  L I+P  +     R +    +  Y EA+ 
Sbjct: 184 RPNFFIAHFNRANLLYGLGYLEEALKDYSKVLEINPKEVNAWVSRGNLLDDLERYDEALA 243

Query: 641 DYDAALDLE 649
           DY  A++L+
Sbjct: 244 DYSQAIELQ 252



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 13/275 (4%)

Query: 355 LKETSNEAKRNKKFCVTRISKSKSISVDF-------------RLSRGIAQVNEGKYASAI 401
           L E   +A  N+    T + + +    D+               +R +  + +G + +A+
Sbjct: 81  LNEVDPDAYYNRAILFTEMGRLEEALADYDTAIEKNFQDPAVHFNRAMVLLRQGDWENAL 140

Query: 402 SIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAA 461
                 +K  P + ++ + R       R+ + A+ D++ AI+  P+   A   R      
Sbjct: 141 DDLATTIKLRPDHADSYVARANVYTDLRKYQEALDDYSLAIRIRPNFFIAHFNRANLLYG 200

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           LG   EA++D SK LE  P   +    RG +    + ++ A+ D S  ++L      A  
Sbjct: 201 LGYLEEALKDYSKVLEINPKEVNAWVSRGNLLDDLERYDEALADYSQAIELQPNGADARF 260

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
              + L  +  Y +A E +   I+ +    EA+ +      DL   E+AL   +Q +   
Sbjct: 261 NRAIVLKKLERYDEALEDYSTIIEQNPGEAEAYNNRGNLLCDLGREEEALADYEQAIINR 320

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
             +++ Y  R ++L  LG+  +A +D    + I+P
Sbjct: 321 PDYAEGYINRAIVLKALGRIGEAREDYQRAIAINP 355



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/273 (23%), Positives = 118/273 (43%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           +  D   +R I     G+   A++ +D  ++++   P     R      Q + E A+ D 
Sbjct: 84  VDPDAYYNRAILFTEMGRLEEALADYDTAIEKNFQDPAVHFNRAMVLLRQGDWENALDDL 143

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
              I+  P   +++  R      L +  EA+ D S A+   PN       R  + +    
Sbjct: 144 ATTIKLRPDHADSYVARANVYTDLRKYQEALDDYSLAIRIRPNFFIAHFNRANLLYGLGY 203

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
              A++D S  ++++ +  +A+   G  L  +  Y +A   + +AI+L  N  +A  +  
Sbjct: 204 LEEALKDYSKVLEINPKEVNAWVSRGNLLDDLERYDEALADYSQAIELQPNGADARFNRA 263

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
              + L   ++ALE    ++  +   ++AY+ RG LL  LG+ ++A+ D    +   P  
Sbjct: 264 IVLKKLERYDEALEDYSTIIEQNPGEAEAYNNRGNLLCDLGREEEALADYEQAIINRPDY 323

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            E    RA    A+G   EA +DY  A+ +  D
Sbjct: 324 AEGYINRAIVLKALGRIGEAREDYQRAIAINPD 356


>gi|363734510|ref|XP_421249.3| PREDICTED: uncharacterized protein LOC423333 [Gallus gallus]
          Length = 1799

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 32/270 (11%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            G+  + +     A   F   ++    YP+A   RG  R   R+ +  I DF   +   PS
Sbjct: 1290 GLCYMEQMNLLQACDAFSTAIRLHSNYPDAFYQRGLCRMQLRQTKC-IQDFNHTLVLCPS 1348

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              +A+  R     + G   +AI + ++A++  PNS +    RG + ++ K F AA+EDLS
Sbjct: 1349 HFQAYMGRAAYYGSKGRYSKAIMNCNEAIKIHPNSVEAYFYRGTLKYQNKTFKAAIEDLS 1408

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
              + LD     AY    +    I +++KA              L+ +G +          
Sbjct: 1409 KTIDLDNTCILAYNNRAICYHQIKDFRKA--------------LKDYGIVLL-------H 1447

Query: 568  EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
            E + E + QV +I+         RGLL   LG +  A +D    + + P + +      +
Sbjct: 1448 EVSKEIVLQV-FIN---------RGLLYMELGDYANACEDFKEAVLLSPGDSQIFQAIGT 1497

Query: 628  CYHAIGEYREAIKDYDAALDLELDSMEKFV 657
            C++ + E+ EA++ ++ AL LE  S+E ++
Sbjct: 1498 CHYRLNEFEEAVRSFNQALRLEPISVEAYI 1527



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/309 (23%), Positives = 125/309 (40%), Gaps = 36/309 (11%)

Query: 387  RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            R +  + + K+++A+   + I K      +A + +      Q +   AI +++ AIQ N 
Sbjct: 869  RHLIYLFQDKFSAALDDLNFITKWKKNKADAYLSKAEIYRKQGDNTMAIINYSSAIQCNS 928

Query: 447  SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
            +  + + RR +      + + A+ D +K  ++ P   D L + GI  F       A++D 
Sbjct: 929  TDDDVYFRRAELYFEENQLLLAVDDYAKCFQYNPKRTDALMKHGIYYFDRSILTTAIQDF 988

Query: 507  SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD------------------- 547
            +A ++ D  N  A  Y G A +   +Y+ A +    AI LD                   
Sbjct: 989  TAVIREDPSNAQARLYRGRAYAKQKQYRNAVQDLTAAIHLDPSCWLAFYYRGCILREIDP 1048

Query: 548  ----------------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLR 591
                            R    ++ H    Y        A+   + V+ +D     AY   
Sbjct: 1049 KRALQDFSVSVLINDTRENFSSFLHRGIIYSKQQQWSIAIRDFESVIALDSSIIFAYLSI 1108

Query: 592  GL-LLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
            GL LL  L Q+ +AI+  ++ + IDP N+     RA  YH I     A+KD + A+ L  
Sbjct: 1109 GLILLLHLDQYYEAIQQFTNAIKIDPLNVRAYLCRAQAYHKIHNLSNAVKDINRAIHLYP 1168

Query: 651  DSMEKFVLQ 659
            D  E  +L+
Sbjct: 1169 DKSELRILR 1177



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/299 (24%), Positives = 126/299 (42%), Gaps = 38/299 (12%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA---RAFQRELEAAISDFTEAIQS 444
            G       ++  A+  F+Q L+ +P+  EA IGRG +      +  LE A  DF +AI  
Sbjct: 1496 GTCHYRLNEFEEAVRSFNQALRLEPISVEAYIGRGNSYMKHGQEAGLEQAQKDFLKAIHL 1555

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            NP   +A    G    ALG+   A   L+  +  +         R +++ +  +  +A++
Sbjct: 1556 NPMCTKARICLGYNLRALGKLRSAWNQLTVVIAIDSKCDTAYEGRALISLQMGEIFSALQ 1615

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG-------HL 557
            D++A +KL        T  G+    +G    A + + +AI +D N+  A+        H 
Sbjct: 1616 DINAALKLTT-TAPLLTNRGVINQLMGHLSCAMKDYQQAISVDPNYALAYFSAANIYFHN 1674

Query: 558  TQFYQD---------------------------LANSEKALECLQQVLYIDKRFSKAYHL 590
             QF Q                            L N E+A E  ++ + +    +  Y  
Sbjct: 1675 RQFSQAYCYYSEVLKLEPRNESAIMNRAVTNTILKNFEEAKEDFEKAVCLCPFSAAVYFN 1734

Query: 591  RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            R    + L Q++ A KD+S+ L I P++     LRA     +G  REA++DY  A+ ++
Sbjct: 1735 RANFYNALKQYELAEKDISTALSIQPNDAMMYRLRADIRAKLGFSREAVEDYKQAISIQ 1793



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 22/225 (9%)

Query: 435  ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
            ++D  E ++ +PSA + + RRG  R  LG+   A+ DL KA+  EP   D    R ++ +
Sbjct: 817  LTDLIEKVE-HPSAFQ-YCRRGAIRRKLGKLKSAMDDLEKAISLEPLLLDAYWHRHLI-Y 873

Query: 495  KFKD-FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
             F+D F+AA++DL+   K  K    AY          G+   A   +  AIQ +    + 
Sbjct: 874  LFQDKFSAALDDLNFITKWKKNKADAYLSKAEIYRKQGDNTMAIINYSSAIQCNSTDDDV 933

Query: 554  WGHLTQFY----QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK-----A 604
            +    + Y    Q L   +   +C Q   Y  KR         L+ HG+    +     A
Sbjct: 934  YFRRAELYFEENQLLLAVDDYAKCFQ---YNPKRTD------ALMKHGIYYFDRSILTTA 984

Query: 605  IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            I+D ++ +  DPSN +    R   Y    +YR A++D  AA+ L+
Sbjct: 985  IQDFTAVIREDPSNAQARLYRGRAYAKQKQYRNAVQDLTAAIHLD 1029



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 118/286 (41%), Gaps = 23/286 (8%)

Query: 396  KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
            +Y  AI  F   +K DP+   A + R  A      L  A+ D   AI   P   E    R
Sbjct: 1118 QYYEAIQQFTNAIKIDPLNVRAYLCRAQAYHKIHNLSNAVKDINRAIHLYPDKSELRILR 1177

Query: 456  GQARAALGESVE------AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
            GQ    L ES +       I  L++  E E   A  + +  I +F  ++ + A+E L A 
Sbjct: 1178 GQY---LTESKKYELASLCIHQLAEMSE-ESLQAQPVQQALIQSF-CQNHSKAMECLHAA 1232

Query: 510  VKLDKENKSAYTYLGLAL-------SSIGEYKKAEEAHL---KAIQLDRNFLEAWGHLTQ 559
                 E  S +  LG           ++G +K+A    +   K +       E +  +  
Sbjct: 1233 ATTHPE-PSVFVLLGKIQMKAEKTEDAVGSFKQAINLLMTSEKTLPPTFEAAETYYLMGL 1291

Query: 560  FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             Y +  N  +A +     + +   +  A++ RGL    L Q  K I+D +  L + PS+ 
Sbjct: 1292 CYMEQMNLLQACDAFSTAIRLHSNYPDAFYQRGLCRMQLRQ-TKCIQDFNHTLVLCPSHF 1350

Query: 620  ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            +    RA+ Y + G Y +AI + + A+ +  +S+E +  +    YQ
Sbjct: 1351 QAYMGRAAYYGSKGRYSKAIMNCNEAIKIHPNSVEAYFYRGTLKYQ 1396



 Score = 46.6 bits (109), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 53/120 (44%)

Query: 396  KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
            +++ A   + ++LK +P    A++ R       +  E A  DF +A+   P +   +  R
Sbjct: 1676 QFSQAYCYYSEVLKLEPRNESAIMNRAVTNTILKNFEEAKEDFEKAVCLCPFSAAVYFNR 1735

Query: 456  GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
                 AL +   A +D+S AL  +PN A +   R  +  K      AVED    + + ++
Sbjct: 1736 ANFYNALKQYELAEKDISTALSIQPNDAMMYRLRADIRAKLGFSREAVEDYKQAISIQEQ 1795



 Score = 43.1 bits (100), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 7/158 (4%)

Query: 386  SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +RG+     G  + A+  + Q +  DP Y  A           R+   A   ++E ++  
Sbjct: 1632 NRGVINQLMGHLSCAMKDYQQAISVDPNYALAYFSAANIYFHNRQFSQAYCYYSEVLKLE 1691

Query: 446  PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            P    A   R      L    EA +D  KA+   P SA +   R       K +  A +D
Sbjct: 1692 PRNESAIMNRAVTNTILKNFEEAKEDFEKAVCLCPFSAAVYFNRANFYNALKQYELAEKD 1751

Query: 506  LSACVKLDKENKSAYTY-------LGLALSSIGEYKKA 536
            +S  + +   +   Y         LG +  ++ +YK+A
Sbjct: 1752 ISTALSIQPNDAMMYRLRADIRAKLGFSREAVEDYKQA 1789


>gi|414077747|ref|YP_006997065.1| TPR repeat-containing serine and cysteine peptidase [Anabaena sp.
           90]
 gi|413971163|gb|AFW95252.1| TPR repeat-containing serine and cysteine peptidase [Anabaena sp.
           90]
          Length = 566

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 113/224 (50%), Gaps = 10/224 (4%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           TR+S  +S + DF  +RGI ++++  Y  ++  F+Q +K DP Y EA   RG    + R+
Sbjct: 275 TRLSNPQS-ARDF-YARGITKLDQYNYQESVEDFNQAIKLDPKYSEAYFKRGYVYTWLRK 332

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
              A+ DF + I  +P+  + +  RG  + +L  +  A++D ++A+   PN A     +G
Sbjct: 333 YSEALVDFNQVIAIDPNYLDGYLNRGWTQISLQNNQAALEDFNRAMRLNPNYAITHAHQG 392

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           +   K  ++ AA+E     ++LD  N   Y+      +++ +Y+ A +    AI +D + 
Sbjct: 393 MAYLKLGNYEAALESSKQAIRLDPNNSYGYSIQANIFNALKDYQSAIKVSSTAILIDPDN 452

Query: 551 LEAWGH------LTQFYQD-LANSEKALECLQQVLYIDKRFSKA 587
             A+ +      LT  YQ  LA+ +K+ E   +  Y+ K  S+ 
Sbjct: 453 FSAYTNRAIARTLTNDYQGALADYQKSSEIFNR-RYVKKSTSQV 495



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 92/199 (46%)

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
           SNP +   +  RG  +       E+++D ++A++ +P  ++   +RG V    + ++ A+
Sbjct: 278 SNPQSARDFYARGITKLDQYNYQESVEDFNQAIKLDPKYSEAYFKRGYVYTWLRKYSEAL 337

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D +  + +D      Y   G    S+   + A E   +A++L+ N+     H    Y  
Sbjct: 338 VDFNQVIAIDPNYLDGYLNRGWTQISLQNNQAALEDFNRAMRLNPNYAITHAHQGMAYLK 397

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L N E ALE  +Q + +D   S  Y ++  + + L  ++ AIK  S+ + IDP N     
Sbjct: 398 LGNYEAALESSKQAIRLDPNNSYGYSIQANIFNALKDYQSAIKVSSTAILIDPDNFSAYT 457

Query: 624 LRASCYHAIGEYREAIKDY 642
            RA       +Y+ A+ DY
Sbjct: 458 NRAIARTLTNDYQGALADY 476



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 98/200 (49%), Gaps = 5/200 (2%)

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           P SA   + RGI      ++  +VED +  +KLD +   AY   G   + + +Y +A   
Sbjct: 280 PQSARDFYARGITKLDQYNYQESVEDFNQAIKLDPKYSEAYFKRGYVYTWLRKYSEALVD 339

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
             + I +D N+L+ + +       L N++ ALE   + + ++  ++  +  +G+    LG
Sbjct: 340 FNQVIAIDPNYLDGYLNRGWTQISLQNNQAALEDFNRAMRLNPNYAITHAHQGMAYLKLG 399

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
            ++ A++     + +DP+N     ++A+ ++A+ +Y+ AIK    A+ ++ D+   +  +
Sbjct: 400 NYEAALESSKQAIRLDPNNSYGYSIQANIFNALKDYQSAIKVSSTAILIDPDNFSAYTNR 459

Query: 660 CLAF-----YQKEIALYTAS 674
            +A      YQ  +A Y  S
Sbjct: 460 AIARTLTNDYQGALADYQKS 479


>gi|431805486|ref|YP_007232387.1| TPR domain-containing protein [Liberibacter crescens BT-1]
 gi|430799461|gb|AGA64132.1| TPR domain protein [Liberibacter crescens BT-1]
          Length = 292

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 83/166 (50%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +   N  KY  A++ +D  LK  P Y  ALIGRG        ++ A +DF +AI  
Sbjct: 110 VNRALVYRNIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINL 169

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N + G AW  +G      G+   AI+  SKA+   P+S +  + RG+     KD   A +
Sbjct: 170 NTTDGRAWHGQGLILQLKGQHERAIEAFSKAISLSPSSPEPYNGRGVSYVALKDDENAFD 229

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
           D +  + LD     +++   L     G+YKK+ +++L A  LD N+
Sbjct: 230 DFNTAINLDPNLAESWSNQALVYEMRGDYKKSLQSYLHAFNLDPNY 275



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 98/217 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS   ++++ +P+ PE    RG A A       A+ DF  A++ N    EA+  R     
Sbjct: 58  ISSLSEVIRSNPLDPEGYNARGVAYARAGNFRDALQDFNMAVKLNHRYYEAYVNRALVYR 117

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            + +  EA+ D   AL+  P+    L  RG +  K    + A  D +  + L+  +  A+
Sbjct: 118 NIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINLNTTDGRAW 177

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL L   G++++A EA  KAI L  +  E +      Y  L + E A +     + +
Sbjct: 178 HGQGLILQLKGQHERAIEAFSKAISLSPSSPEPYNGRGVSYVALKDDENAFDDFNTAINL 237

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
           D   ++++  + L+    G +KK+++       +DP+
Sbjct: 238 DPNLAESWSNQALVYEMRGDYKKSLQSYLHAFNLDPN 274



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 109/232 (46%), Gaps = 13/232 (5%)

Query: 465 SVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLG 524
           S E I  LS+ +   P   +  + RG+   +  +F  A++D +  VKL+     AY    
Sbjct: 54  SQENISSLSEVIRSNPLDPEGYNARGVAYARAGNFRDALQDFNMAVKLNHRYYEAYVNRA 113

Query: 525 LALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRF 584
           L   +I +Y +A   +  A+++  ++  A       Y+ L + +KA     + + ++   
Sbjct: 114 LVYRNIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINLNTTD 173

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDA 644
            +A+H +GL+L   GQH++AI+  S  + + PS+ E    R   Y A+ +   A  D++ 
Sbjct: 174 GRAWHGQGLILQLKGQHERAIEAFSKAISLSPSSPEPYNGRGVSYVALKDDENAFDDFNT 233

Query: 645 ALDLELDSMEKFVLQCLAF-----YQKEIALYTASKINSEFCWFDIDGDIDP 691
           A++L+ +  E +  Q L +     Y+K +  Y  +        F++D +  P
Sbjct: 234 AINLDPNLAESWSNQALVYEMRGDYKKSLQSYLHA--------FNLDPNYAP 277



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 94/215 (43%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  +E I+SNP   E +  RG A A  G   +A+QD + A++      +    R +V  
Sbjct: 58  ISSLSEVIRSNPLDPEGYNARGVAYARAGNFRDALQDFNMAVKLNHRYYEAYVNRALVYR 117

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             + +N A+ D    +K+      A    G     +G   KA     KAI L+     AW
Sbjct: 118 NIRKYNEALADYDLALKIHPSYDVALIGRGNLYRKLGSIDKAFADFNKAINLNTTDGRAW 177

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                  Q     E+A+E   + + +     + Y+ RG+    L   + A  D ++ + +
Sbjct: 178 HGQGLILQLKGQHERAIEAFSKAISLSPSSPEPYNGRGVSYVALKDDENAFDDFNTAINL 237

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           DP+  E    +A  Y   G+Y+++++ Y  A +L+
Sbjct: 238 DPNLAESWSNQALVYEMRGDYKKSLQSYLHAFNLD 272


>gi|427720396|ref|YP_007068390.1| hypothetical protein Cal7507_5215 [Calothrix sp. PCC 7507]
 gi|427352832|gb|AFY35556.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 7507]
          Length = 280

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 10/203 (4%)

Query: 374 SKSKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           S  K+IS+D +      SRG+A  + GK + AI+ ++Q ++ +P   EA   RG ARA Q
Sbjct: 81  SYDKAISLDSQYGAAYKSRGLAYFDLGKKSEAIADYNQAIRINPNDAEAYNSRGNARASQ 140

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            +   A+ D+ EAI+  P+  EA+  RG ARA+ G+  +A+ DL +A+   P  A   + 
Sbjct: 141 NDNRGAVEDYNEAIRLAPNYAEAYNNRGNARASQGDKNKALDDLGQAIRLNPRYAIAYNN 200

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG +    +D   A+ D +  ++L+     AY   G A ++ G+   A    LK +Q   
Sbjct: 201 RGNIRASQRDNKGAIADYNQAIRLNPNFGPAYNNRGNARAADGDKPGA----LKDLQRAA 256

Query: 549 NFLEAWGHLTQFYQDLANSEKAL 571
           +  +   +    YQ + N+ K L
Sbjct: 257 DIFQNQDN-KDLYQQVMNNIKEL 278



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 52/170 (30%), Positives = 88/170 (51%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G  Q  +G    AI+ +D+ +  D  Y  A   RG A     +   AI+D+ +AI+ NP
Sbjct: 65  QGQNQHLKGNLQGAIASYDKAISLDSQYGAAYKSRGLAYFDLGKKSEAIADYNQAIRINP 124

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA+  RG ARA+  ++  A++D ++A+   PN A+  + RG       D N A++DL
Sbjct: 125 NDAEAYNSRGNARASQNDNRGAVEDYNEAIRLAPNYAEAYNNRGNARASQGDKNKALDDL 184

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
              ++L+     AY   G   +S  + K A   + +AI+L+ NF  A+ +
Sbjct: 185 GQAIRLNPRYAIAYNNRGNIRASQRDNKGAIADYNQAIRLNPNFGPAYNN 234



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 55/194 (28%), Positives = 91/194 (46%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G  +  +  L+ AI+ + +AI  +   G A+K RG A   LG+  EAI D ++A+   P
Sbjct: 65  QGQNQHLKGNLQGAIASYDKAISLDSQYGAAYKSRGLAYFDLGKKSEAIADYNQAIRINP 124

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A+  + RG       D   AVED +  ++L      AY   G A +S G+  KA +  
Sbjct: 125 NDAEAYNSRGNARASQNDNRGAVEDYNEAIRLAPNYAEAYNNRGNARASQGDKNKALDDL 184

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI+L+  +  A+ +         +++ A+    Q + ++  F  AY+ RG      G 
Sbjct: 185 GQAIRLNPRYAIAYNNRGNIRASQRDNKGAIADYNQAIRLNPNFGPAYNNRGNARAADGD 244

Query: 601 HKKAIKDLSSGLGI 614
              A+KDL     I
Sbjct: 245 KPGALKDLQRAADI 258



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 1/217 (0%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E  +S        N  AGE + + GQ +   G    AI    KA+  +         RG+
Sbjct: 43  EIGVSPPNRRTARNSKAGEFYVQ-GQNQHLKGNLQGAIASYDKAISLDSQYGAAYKSRGL 101

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
             F     + A+ D +  ++++  +  AY   G A +S  + + A E + +AI+L  N+ 
Sbjct: 102 AYFDLGKKSEAIADYNQAIRINPNDAEAYNSRGNARASQNDNRGAVEDYNEAIRLAPNYA 161

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           EA+ +         +  KAL+ L Q + ++ R++ AY+ RG +      +K AI D +  
Sbjct: 162 EAYNNRGNARASQGDKNKALDDLGQAIRLNPRYAIAYNNRGNIRASQRDNKGAIADYNQA 221

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           + ++P+       R +   A G+   A+KD   A D+
Sbjct: 222 IRLNPNFGPAYNNRGNARAADGDKPGALKDLQRAADI 258


>gi|118359319|ref|XP_001012899.1| TPR Domain containing protein [Tetrahymena thermophila]
 gi|89294666|gb|EAR92654.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
          Length = 1122

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 191/453 (42%), Gaps = 28/453 (6%)

Query: 279 DDFDICNGPIDKASVNERHGRQTNGTHDVHDK---LSSDSASLNDSNTNSESYSKSSISD 335
           D FD     +D+  + +          D + +   L  ++ S  D    SE+  K     
Sbjct: 293 DSFDKAQKNLDQFQIQQLENTWEFDLEDFNQQIEDLLDEAYSFFDQKKESEAIEKFKKVI 352

Query: 336 NKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR-----GIA 390
             + +S E+ S + + + ++ +T N  +          S  KSI ++   SR     G  
Sbjct: 353 EINPNSYETYSSIGYCYYIIGDTINSEE----------SFKKSIELNKNYSRAYYYLGCE 402

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
              +GK   AI    Q +K +    ++    G     + E + AI+ F +AI+ NP   +
Sbjct: 403 YFMQGKQEQAILNLKQSIKLNKYDADSHFKIGYIYYEKGEDDIAINYFKQAIKINPYYEQ 462

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+   G       +  +AI    KA++  PN  D  +  G+  +  K F+ A+       
Sbjct: 463 AYNMIGNIYNYQQKQEDAIIWYDKAIQLNPNFGDNYNNLGLQYYNQKQFDQALWYFQKSA 522

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           +  K   +AY   GL   ++ +  +A + + KAI++D NF +A  +L   Y D    +++
Sbjct: 523 EKSKNLVNAYVNQGLCYQNLNQQDEAIQQYQKAIEVDPNFSDAHYNLALIYYDKKLMKES 582

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           +E  Q  + +      AY+  G+  H L Q+ +AI+   + + I  +    +Y     Y+
Sbjct: 583 IEQYQIAIDVKPSSYDAYYNMGIAYHSLQQYDEAIQSYKNAIKIKANYNNAIYNLGVTYY 642

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDID 690
            +G+Y E++K Y  A DL  D    FV  C   Y   ++    +K      W+     +D
Sbjct: 643 DLGQYEESLKYYSQAYDLNPD----FVDIC---YSTGLSYEKLNKYPEALDWYKRAIKLD 695

Query: 691 PLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKG 723
           PL+ + + KRL    V E   RQ    + L KG
Sbjct: 696 PLYMDPF-KRLIDIYVKEG--RQEEAIEFLTKG 725



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/295 (20%), Positives = 140/295 (47%), Gaps = 2/295 (0%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           KSK++ V+  +++G+   N  +   AI  + + ++ DP + +A          ++ ++ +
Sbjct: 524 KSKNL-VNAYVNQGLCYQNLNQQDEAIQQYQKAIEVDPNFSDAHYNLALIYYDKKLMKES 582

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I  +  AI   PS+ +A+   G A  +L +  EAIQ    A++ + N  + ++  G+  +
Sbjct: 583 IEQYQIAIDVKPSSYDAYYNMGIAYHSLQQYDEAIQSYKNAIKIKANYNNAIYNLGVTYY 642

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
               +  +++  S    L+ +        GL+   + +Y +A + + +AI+LD  +++ +
Sbjct: 643 DLGQYEESLKYYSQAYDLNPDFVDICYSTGLSYEKLNKYPEALDWYKRAIKLDPLYMDPF 702

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
             L   Y      E+A+E L + + + ++    Y   G++     +  +A++     +  
Sbjct: 703 KRLIDIYVKEGRQEEAIEFLTKGIGLAEKNEVQYFYLGVIKFKELKLDEAMQFFKQAIEK 762

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSME-KFVLQCLAFYQKEI 668
           +PS  +  +    CY+    Y EAI++Y  A +L+ +  +  + L    +Y+KE+
Sbjct: 763 NPSLEDAHFNLGLCYYKQKNYDEAIREYLIADELKPNQSDLSYNLGITYYYRKEL 817



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 116/261 (44%)

Query: 388  GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            G+ +  E K   A+  F Q ++++P   +A    G     Q+  + AI ++  A +  P+
Sbjct: 740  GVIKFKELKLDEAMQFFKQAIEKNPSLEDAHFNLGLCYYKQKNYDEAIREYLIADELKPN 799

Query: 448  AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              +     G       E  EA +   K+++  PN  D     GIV ++ +++  A++   
Sbjct: 800  QSDLSYNLGITYYYRKELEEAKKWYLKSIQLNPNYCDAYFNLGIVYYEEQNYEEAIQMYK 859

Query: 508  ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
               +LD +   A     +    + + ++      KAI++D   ++ +  L Q +  L N+
Sbjct: 860  KSFELDSKFADACYNTSITYDKLNDSEQCIYWSEKAIEIDPKCIDTYKFLGQIFSKLDNN 919

Query: 568  EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
            EKAL+   +++ +      A +  G+    L  + +AI+    G  I+P+  + LY    
Sbjct: 920  EKALKIYLKLVDLLPDDENALYNLGITYQLLHMYNEAIEVFEKGYKINPNQCDLLYNLGL 979

Query: 628  CYHAIGEYREAIKDYDAALDL 648
             Y+ + E   +I+ Y  AL++
Sbjct: 980  IYYELKENELSIQWYQKALNV 1000



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 112/267 (41%), Gaps = 7/267 (2%)

Query: 367  KFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYP---EALIGRGT 423
            +F    I K+ S+  D   + G+    +  Y  AI    + L  D + P   +     G 
Sbjct: 754  QFFKQAIEKNPSLE-DAHFNLGLCYYKQKNYDEAIR---EYLIADELKPNQSDLSYNLGI 809

Query: 424  ARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
               +++ELE A   + ++IQ NP+  +A+   G          EAIQ   K+ E +   A
Sbjct: 810  TYYYRKELEEAKKWYLKSIQLNPNYCDAYFNLGIVYYEEQNYEEAIQMYKKSFELDSKFA 869

Query: 484  DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
            D  +   I   K  D    +      +++D +    Y +LG   S +   +KA + +LK 
Sbjct: 870  DACYNTSITYDKLNDSEQCIYWSEKAIEIDPKCIDTYKFLGQIFSKLDNNEKALKIYLKL 929

Query: 544  IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
            + L  +   A  +L   YQ L    +A+E  ++   I+       +  GL+ + L +++ 
Sbjct: 930  VDLLPDDENALYNLGITYQLLHMYNEAIEVFEKGYKINPNQCDLLYNLGLIYYELKENEL 989

Query: 604  AIKDLSSGLGIDPSNIECLYLRASCYH 630
            +I+     L ++P      Y  A CY+
Sbjct: 990  SIQWYQKALNVNPKYQNAHYNIALCYY 1016


>gi|449105205|ref|ZP_21741910.1| hypothetical protein HMPREF9729_00175 [Treponema denticola ASLM]
 gi|451969511|ref|ZP_21922740.1| hypothetical protein HMPREF9728_01940 [Treponema denticola US-Trep]
 gi|448967192|gb|EMB47833.1| hypothetical protein HMPREF9729_00175 [Treponema denticola ASLM]
 gi|451701608|gb|EMD56069.1| hypothetical protein HMPREF9728_01940 [Treponema denticola US-Trep]
          Length = 369

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 125/272 (45%), Gaps = 8/272 (2%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI   ++ LK +P Y E+++ RG       +   AI DF+  I+  P+   A+  R    
Sbjct: 74  AIHDINRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCY 133

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G+  + + D++ A++ +P  +     RG + ++ KD++ A+ + +  +KL+  +  A
Sbjct: 134 LEFGDFEKVLCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDA 193

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
           Y   GL   +I +Y  A   + KA++L     + + H+      L   + A+    + + 
Sbjct: 194 YFSRGLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIK 253

Query: 580 IDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
           I+   ++AY  RG +   L  +  +IKDL   + +  SN    Y +A   ++  E  EAI
Sbjct: 254 INNTDAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAI 313

Query: 640 KDYDAALDLELDSMEKFVLQCLAFYQKEIALY 671
              +  ++L  D  +        FYQ +  +Y
Sbjct: 314 DCLEEGINLFPDYYD--------FYQVKAKIY 337



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 14/289 (4%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           I Q+N  KY   I       ++DP   +    RG   +     + AI D   +++ NP+ 
Sbjct: 36  IYQMNLSKYERQI-------EKDPNNYKLYYERGYYYSLSGYYDLAIHDINRSLKINPNY 88

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            E+   RG    A+ +  EAI D S+ +E  PN     + R     +F DF   + D+++
Sbjct: 89  EESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFGDFEKVLCDINS 148

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            +KLD ++   +   G     + +Y  A   + +A++L+    +A+     FY+ + +  
Sbjct: 149 AIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSRGLFYETIKDYN 208

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            AL    + L +  R +  Y   GL  + L ++  AI   +  + I+ ++ E    R S 
Sbjct: 209 SALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNTDAEAYTWRGSI 268

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKIN 677
           Y  +  Y  +IKD D A++L   S E      + FY K +ALY+ +++N
Sbjct: 269 YFILKNYDNSIKDLDMAINLG-GSNE------VVFYNKAVALYSKNELN 310



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 3/265 (1%)

Query: 373 ISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           I++S  I+ ++    L RG+      KY  AI  F ++++  P  P A   R +      
Sbjct: 78  INRSLKINPNYEESILLRGLIFYAMMKYNEAIVDFSRVIELIPNDPRAYNNRSSCYLEFG 137

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + E  + D   AI+ +P     +K RG+    L +   AI + ++AL+  P  +D    R
Sbjct: 138 DFEKVLCDINSAIKLDPKDSLHFKNRGEIFYRLKDYDNAILNYTQALKLNPRDSDAYFSR 197

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+     KD+N+A+ D    +KL   +   Y ++GL+  ++ EY  A  A  K I+++  
Sbjct: 198 GLFYETIKDYNSALSDYYKALKLKYRSNDIYFHIGLSCYALKEYDNAINAFNKYIKINNT 257

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             EA+      Y  L N + +++ L   + +       ++ + + L+   +  +AI  L 
Sbjct: 258 DAEAYTWRGSIYFILKNYDNSIKDLDMAINLGGSNEVVFYNKAVALYSKNELNEAIDCLE 317

Query: 610 SGLGIDPSNIECLYLRASCYHAIGE 634
            G+ + P   +   ++A  Y ++ E
Sbjct: 318 EGINLFPDYYDFYQVKAKIYRSLSE 342


>gi|224539753|ref|ZP_03680292.1| hypothetical protein BACCELL_04662 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518631|gb|EEF87736.1| hypothetical protein BACCELL_04662 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 679

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 118/287 (41%), Gaps = 38/287 (13%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    RG A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDFQGAEADCNAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR        AI+D   AL+++P +  + H   + + + +D+ AA EDL   +K+    
Sbjct: 98  LARIRQNNYDGAIEDYKTALKYDPENLVLWHNLSLCHMQKEDYGAAKEDLGKLLKIAPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
             AY   G       +  +A     KAI++DR   + WG                     
Sbjct: 158 TRAYLMRGEVSLKQKDTIQALNDFEKAIEMDRYDPDGWGARAIVRLQQGKYADAEADLDH 217

Query: 556 --HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
             HL+             +F+Q+  N   A+      L ID      ++ RGLL   +G 
Sbjct: 218 SIHLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGD 275

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
             +AI+D    L I+P N+   + R       G YR AI DY   +D
Sbjct: 276 DNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYRGAISDYSKVID 322



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ +GKYA A +  D  +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVRLQQGKYADAEADLDHSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    L+ EP++      RG++  +  ++  A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYRGAISD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            S  +       + Y +   A   IG+ K AE+   K +++
Sbjct: 317 YSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQDEFKLMKM 357



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 13/289 (4%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI---GRGTAR 425
           C   I ++  +   +++ RG+A++ +  Y  AI  +   LK DP   E L+         
Sbjct: 79  CNAAIQRNPFVVGAYQI-RGLARIRQNNYDGAIEDYKTALKYDP---ENLVLWHNLSLCH 134

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
             + +  AA  D  + ++  P    A+  RG+      ++++A+ D  KA+E +    D 
Sbjct: 135 MQKEDYGAAKEDLGKLLKIAPRYTRAYLMRGEVSLKQKDTIQALNDFEKAIEMDRYDPDG 194

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
              R IV  +   +  A  DL   + L  +N   Y    LA       + A   +  A+ 
Sbjct: 195 WGARAIVRLQQGKYADAEADLDHSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALD 254

Query: 546 LD-RNFLEAWGHLTQ--FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           +D  NFL   GH  +      + +  +A+E    VL I+     A   RGLL    G ++
Sbjct: 255 IDPNNFL---GHYNRGLLRAQVGDDNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYR 311

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            AI D S  +   P+ +   Y RA     IG+ + A +D    + +++D
Sbjct: 312 GAISDYSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQDEFKLMKMQID 360



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 57/137 (41%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   +Q 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLQI 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G    AI D SK ++  PN     + R     K  D   A +
Sbjct: 290 EPDNMMATFNRGLLRAQTGNYRGAISDYSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQ 349

Query: 505 DLSACVKLDKENKSAYT 521
           D    +K+  + ++  T
Sbjct: 350 DEFKLMKMQIDKRNGVT 366



 Score = 43.5 bits (101), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 33/158 (20%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
           RG+  +  +DF ++++D +  + LD +   AY    L      EYKKAE A L       
Sbjct: 508 RGLDFYLVQDFASSIDDFTQAILLDDKFFPAYFMRALVRYKQLEYKKAE-AELTEGVPGA 566

Query: 542 -----------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
                                    IQL  +F+  + +       L +   ALE   + +
Sbjct: 567 SSDSKKQPEVTSIDYDIVKNDLDHVIQLAPDFVYGYYNRANVLSMLKDYRGALEDYNKAI 626

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
            ++K F++AY  RGL    LG +K+ I DLS    LGI
Sbjct: 627 ELNKDFAEAYFNRGLTHIFLGNNKQGITDLSKAGELGI 664



 Score = 40.8 bits (94), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 37/80 (46%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D +++  P +      R    +  ++   A+ D+ +AI+ N    EA+  RG     LG
Sbjct: 588 LDHVIQLAPDFVYGYYNRANVLSMLKDYRGALEDYNKAIELNKDFAEAYFNRGLTHIFLG 647

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            + + I DLSKA E    SA
Sbjct: 648 NNKQGITDLSKAGELGIVSA 667


>gi|336405599|ref|ZP_08586276.1| hypothetical protein HMPREF0127_03589 [Bacteroides sp. 1_1_30]
 gi|336417227|ref|ZP_08597553.1| hypothetical protein HMPREF1017_04661 [Bacteroides ovatus
           3_8_47FAA]
 gi|423297785|ref|ZP_17275845.1| hypothetical protein HMPREF1070_04510 [Bacteroides ovatus
           CL03T12C18]
 gi|335936425|gb|EGM98355.1| hypothetical protein HMPREF1017_04661 [Bacteroides ovatus
           3_8_47FAA]
 gi|335937470|gb|EGM99370.1| hypothetical protein HMPREF0127_03589 [Bacteroides sp. 1_1_30]
 gi|392665143|gb|EIY58675.1| hypothetical protein HMPREF1070_04510 [Bacteroides ovatus
           CL03T12C18]
          Length = 676

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD+NAA EDL + +K+    
Sbjct: 98  LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYNAAKEDLESLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            + +A+  LQQ
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------AARAIVKLQQ 205

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F++A  L          R L        + A+ D    L IDP+N    Y 
Sbjct: 206 AKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 265

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 266 RGLLRAQVGDDNRAIEDFDFVIKMEPDNM 294



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A + F++ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K AE+   K +  Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 361



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A +DF  AI  
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNRAIPL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 282 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 34/253 (13%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           ++ + +  Y +A    + +LK  P Y  A + RG     Q++  AA++DF +A++ +   
Sbjct: 132 LSHIQKKDYNAAKEDLESLLKVSPRYTRAYLMRGEVSLQQKDTIAALNDFNKALELDKYD 191

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +AW  R   +    +  EA  D ++A+     +A     R +  F   +   A+ D   
Sbjct: 192 PDAWAARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDL 251

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + +D  N             IG Y             +R  L A          + +  
Sbjct: 252 ALDIDPNN------------FIGHY-------------NRGLLRAQ---------VGDDN 277

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+E    V+ ++     A   RGLL    G ++ AI+D ++ +   P+ +   Y R+  
Sbjct: 278 RAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEA 337

Query: 629 YHAIGEYREAIKD 641
              IG+ + A +D
Sbjct: 338 RRKIGDKKGAEQD 350



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 116/286 (40%), Gaps = 16/286 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D+T  I   
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    + +R +AR  +G+   A QD     EF+   A I  + G+ N           D
Sbjct: 325 PNFLAGYYQRSEARRKIGDKKGAEQD-----EFKVMKAQIDKQNGVTNKDVAQNKDKEND 379

Query: 506 LSACVKLDKE-NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF---LEAWGHLTQFY 561
                K  K+ +K+   Y  + ++   E ++   +  +    D+N    LE    LT +Y
Sbjct: 380 EEGGEKTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNITLEPMFALT-YY 438

Query: 562 QDLA------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           + ++      N  K +E L +   + KR         L    +  H   I   +S +  D
Sbjct: 439 EKMSDVKRSVNFHKYIEDLNRTGILPKRLRITNMEAPLTEEQVKVHFALIDTHTSAIVED 498

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             N    + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 499 DKNASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 544



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AI+ NP   +A+  RG     LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 644

Query: 464 ESVEAIQDLSKALEF 478
            +   I DLSKA E 
Sbjct: 645 NNKLGISDLSKAGEL 659



 Score = 44.3 bits (103), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D   A +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 350 DEFKVMKAQIDKQN 363


>gi|383112592|ref|ZP_09933384.1| hypothetical protein BSGG_0535 [Bacteroides sp. D2]
 gi|313693000|gb|EFS29835.1| hypothetical protein BSGG_0535 [Bacteroides sp. D2]
          Length = 676

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD+NAA EDL + +K+    
Sbjct: 98  LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYNAAKEDLESLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            + +A+  LQQ
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------AARAIVKLQQ 205

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F++A  L          R L        + A+ D    L IDP+N    Y 
Sbjct: 206 AKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 265

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 266 RGLLRAQVGDDNRAIEDFDFVIKMEPDNM 294



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A + F++ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K AE+  +K +  Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEIKVMKAQIDK 361



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A +DF  AI  
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNRAIPL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 282 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/263 (20%), Positives = 106/263 (40%), Gaps = 34/263 (12%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           ++ + +  Y +A    + +LK  P Y  A + RG     Q++  AA++DF +A++ +   
Sbjct: 132 LSHIQKKDYNAAKEDLESLLKVSPRYTRAYLMRGEVSLQQKDTIAALNDFNKALELDKYD 191

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +AW  R   +    +  EA  D ++A+     +A     R +  F   +   A+ D   
Sbjct: 192 PDAWAARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDL 251

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + +D  N             IG Y             +R  L A          + +  
Sbjct: 252 ALDIDPNN------------FIGHY-------------NRGLLRAQ---------VGDDN 277

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+E    V+ ++     A   RGLL    G ++ AI+D ++ +   P+ +   Y R+  
Sbjct: 278 RAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEA 337

Query: 629 YHAIGEYREAIKDYDAALDLELD 651
              IG+ + A +D    +  ++D
Sbjct: 338 RRKIGDKKGAEQDEIKVMKAQID 360



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 16/286 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D+T  I   
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    + +R +AR  +G+   A QD  K ++     A I  + G+ N           D
Sbjct: 325 PNFLAGYYQRSEARRKIGDKKGAEQDEIKVMK-----AQIDKQNGVTNKDVAQNKDKEND 379

Query: 506 LSACVKLDKE-NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF---LEAWGHLTQFY 561
                K  K+ +K+   Y  + ++   E ++   +  +    D+N    LE    LT +Y
Sbjct: 380 EEGGEKTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNITLEPMFALT-YY 438

Query: 562 QDLA------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           + ++      N  K +E L +   + KR         L    +  H   I   +S +  D
Sbjct: 439 EKMSDVKRSVNFHKYIEDLNRTGILPKRLRITNMEAPLTEEQVKVHFALIDTHTSAIVED 498

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             N    + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 499 DKNASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 544



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AI+ NP   +A+  RG     LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 644

Query: 464 ESVEAIQDLSKALEF 478
            +   I DLSKA E 
Sbjct: 645 NNKLGISDLSKAGEL 659



 Score = 44.3 bits (103), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D   A +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 350 DEIKVMKAQIDKQN 363


>gi|124006312|ref|ZP_01691147.1| TPR repeat [Microscilla marina ATCC 23134]
 gi|123988236|gb|EAY27894.1| TPR repeat [Microscilla marina ATCC 23134]
          Length = 403

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 5/276 (1%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G  Q+ +  Y  AI  F + LK    +P     RG +    ++ + A+ DF + +   P+
Sbjct: 100 GTVQMIQKDYKGAIQSFSRALKT-RRHPMLFFNRGISHYQLKQYKQAVKDFDQGLAMRPT 158

Query: 448 AGEAWKR----RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            G    R    RG AR  LG    AI D +  +   P + + L+ RG+   K   +  A+
Sbjct: 159 KGNLPIRLHNNRGNARDMLGNHKGAIADYTAVINKAPGNDNALYNRGLTYKKIYKYKEAI 218

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D    +K+  + K  Y + G+  ++  +YK A     KAI+L  + +  +       Q+
Sbjct: 219 ADFDKVIKMGAKFKDVYYHRGMCRNATEDYKGAVADFNKAIELQGDDVLVYNGRGYAKQN 278

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L + + A+    + + +D   S  Y+ RG L       K A+ D    + + P + +   
Sbjct: 279 LRDDKGAIADFSKAIELDPNNSLGYYSRGGLRLQAQDFKAALADFDKIIQLKPKDEKAYL 338

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
            R +    +G+Y+ A+ D+D A+ L   S + + ++
Sbjct: 339 TRGNIKFKLGDYKGALADFDQAIKLAPKSRKGYFMR 374



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 3/186 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+      KY  AI+ FD+++K    + +    RG  R    + + A++DF +AI+  
Sbjct: 203 NRGLTYKKIYKYKEAIADFDKVIKMGAKFKDVYYHRGMCRNATEDYKGAVADFNKAIELQ 262

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                 +  RG A+  L +   AI D SKA+E +PN++   + RG +  + +DF AA+ D
Sbjct: 263 GDDVLVYNGRGYAKQNLRDDKGAIADFSKAIELDPNNSLGYYSRGGLRLQAQDFKAALAD 322

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL---DRNFLEAWGHLTQFYQ 562
               ++L  +++ AY   G     +G+YK A     +AI+L    R      G++ Q   
Sbjct: 323 FDKIIQLKPKDEKAYLTRGNIKFKLGDYKGALADFDQAIKLAPKSRKGYFMRGNVKQKLG 382

Query: 563 DLANSE 568
           DL  +E
Sbjct: 383 DLEGAE 388



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 16/217 (7%)

Query: 441 AIQSNPSAGE---AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           A   +P A E   A KR+ +A+    E  +AI+  +KALE        +  RGI     K
Sbjct: 18  AFGQDPRAKEFFVAGKRKLRAK----EYKKAIEYFNKALEVNKVDISAMGARGIAKMGLK 73

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           D+  A  D +A ++L+  +      LG       +YK A ++  +A++  R+ +  +   
Sbjct: 74  DYKGASNDFNAILQLNPRDARTLNNLGTVQMIQKDYKGAIQSFSRALKTRRHPMLFFNRG 133

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKA------YHLRGLLLHGLGQHKKAIKDLSSG 611
              YQ L   ++A++   Q L +  R +K       ++ RG     LG HK AI D ++ 
Sbjct: 134 ISHYQ-LKQYKQAVKDFDQGLAM--RPTKGNLPIRLHNNRGNARDMLGNHKGAIADYTAV 190

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           +   P N   LY R   Y  I +Y+EAI D+D  + +
Sbjct: 191 INKAPGNDNALYNRGLTYKKIYKYKEAIADFDKVIKM 227



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 34/257 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+   G +  AI+ +  ++ + P    AL  RG       + + AI+DF + I+  
Sbjct: 169 NRGNARDMLGNHKGAIADYTAVINKAPGNDNALYNRGLTYKKIYKYKEAIADFDKVIKMG 228

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               + +  RG  R A  +   A+ D +KA+E + +   + + RG      +D   A+ D
Sbjct: 229 AKFKDVYYHRGMCRNATEDYKGAVADFNKAIELQGDDVLVYNGRGYAKQNLRDDKGAIAD 288

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            S  ++LD  N            S+G Y +                   G L    QD  
Sbjct: 289 FSKAIELDPNN------------SLGYYSR-------------------GGLRLQAQDF- 316

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             + AL    +++ +  +  KAY  RG +   LG +K A+ D    + + P + +  ++R
Sbjct: 317 --KAALADFDKIIQLKPKDEKAYLTRGNIKFKLGDYKGALADFDQAIKLAPKSRKGYFMR 374

Query: 626 ASCYHAIGEYREAIKDY 642
            +    +G+   A  D+
Sbjct: 375 GNVKQKLGDLEGAEADW 391



 Score = 63.2 bits (152), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 77/165 (46%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D    RG+ +     Y  A++ F++ ++          GRG A+   R+ + AI+DF++A
Sbjct: 233 DVYYHRGMCRNATEDYKGAVADFNKAIELQGDDVLVYNGRGYAKQNLRDDKGAIADFSKA 292

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I+ +P+    +  RG  R    +   A+ D  K ++ +P        RG + FK  D+  
Sbjct: 293 IELDPNNSLGYYSRGGLRLQAQDFKAALADFDKIIQLKPKDEKAYLTRGNIKFKLGDYKG 352

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           A+ D    +KL  +++  Y   G     +G+ + AE   +KA Q+
Sbjct: 353 ALADFDQAIKLAPKSRKGYFMRGNVKQKLGDLEGAEADWMKAGQV 397



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 119/297 (40%), Gaps = 51/297 (17%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP---------- 446
           Y  AI  F++ L+ + +   A+  RG A+   ++ + A +DF   +Q NP          
Sbjct: 41  YKKAIEYFNKALEVNKVDISAMGARGIAKMGLKDYKGASNDFNAILQLNPRDARTLNNLG 100

Query: 447 ----------SAGEAWKR-------------RGQARAALGESVEAIQDLSKALEFEPNSA 483
                      A +++ R             RG +   L +  +A++D  + L   P   
Sbjct: 101 TVQMIQKDYKGAIQSFSRALKTRRHPMLFFNRGISHYQLKQYKQAVKDFDQGLAMRPTKG 160

Query: 484 DI---LH-ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           ++   LH  RG       +   A+ D +A +     N +A    GL    I +YK+A   
Sbjct: 161 NLPIRLHNNRGNARDMLGNHKGAIADYTAVINKAPGNDNALYNRGLTYKKIYKYKEAIAD 220

Query: 540 HLKAIQLDRNFLEAWGH------LTQFYQD-LANSEKALECLQQVLYIDKRFSKAYHLRG 592
             K I++   F + + H       T+ Y+  +A+  KA+E     + +       Y+ RG
Sbjct: 221 FDKVIKMGAKFKDVYYHRGMCRNATEDYKGAVADFNKAIELQGDDVLV-------YNGRG 273

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
                L   K AI D S  + +DP+N    Y R        +++ A+ D+D  + L+
Sbjct: 274 YAKQNLRDDKGAIADFSKAIELDPNNSLGYYSRGGLRLQAQDFKAALADFDKIIQLK 330


>gi|67459786|ref|YP_247410.1| hypothetical protein RF_1394 [Rickettsia felis URRWXCal2]
 gi|67005319|gb|AAY62245.1| TPR [Rickettsia felis URRWXCal2]
          Length = 273

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 123/244 (50%), Gaps = 21/244 (8%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            ++G+   + G+Y +AI ++++ L+ +P Y E+ I +GTA +  +  E AI  F +AI+ 
Sbjct: 34  FNKGVLLEDLGEYETAIKLYNKALELNPNYFESHINKGTALSSLKRYELAIDSFNKAIKI 93

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP-------NSADILHERGIVNFKFK 497
                 A+  +    A LG+ + AI+   + ++ E        N A+IL E         
Sbjct: 94  KFDHPTAYYNKAYILAKLGKYILAIKSYKEVIKLESSHFAAHYNLANILLE--------- 144

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
                ++  +  +KL+ +  +AY+  G+AL+ + +Y  A E+  KAI+L+ N   A+ + 
Sbjct: 145 -----LKKYTQAIKLNPDYSTAYSNKGIALAKLKKYNLAIESFNKAIELNPNNSYAYLNK 199

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                 LA  E+ALE   + + +D     AY  +GL L  LG++  A++  +  L ++P 
Sbjct: 200 GNILCTLAKYEQALELYDKTIELDLNDYDAYFNKGLALEELGKYDLALESYNKALELEPD 259

Query: 618 NIEC 621
           N+E 
Sbjct: 260 NLEV 263



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 121/241 (50%), Gaps = 11/241 (4%)

Query: 423 TARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS 482
           +A  ++++LE     + +AI+ NP+  EA+  +G     LGE   AI+  +KALE  PN 
Sbjct: 8   SAENYEKKLE----KYDKAIKRNPNDAEAYFNKGVLLEDLGEYETAIKLYNKALELNPNY 63

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
            +    +G      K +  A++  +  +K+  ++ +AY      L+ +G+Y  A +++ +
Sbjct: 64  FESHINKGTALSSLKRYELAIDSFNKAIKIKFDHPTAYYNKAYILAKLGKYILAIKSYKE 123

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
            I+L+        H    Y +LAN    L+   Q + ++  +S AY  +G+ L  L ++ 
Sbjct: 124 VIKLES------SHFAAHY-NLANILLELKKYTQAIKLNPDYSTAYSNKGIALAKLKKYN 176

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            AI+  +  + ++P+N      + +    + +Y +A++ YD  ++L+L+  + +  + LA
Sbjct: 177 LAIESFNKAIELNPNNSYAYLNKGNILCTLAKYEQALELYDKTIELDLNDYDAYFNKGLA 236

Query: 663 F 663
            
Sbjct: 237 L 237



 Score = 43.5 bits (101), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 8/141 (5%)

Query: 11  YRLNKTHKTICEIDELVRVDSVMASAITARIELAK-LCSLRNWSKAIRILDSLLAQSYEI 69
           Y L K  K I  I     V  + +S   A   LA  L  L+ +++AI+ L+   + +Y  
Sbjct: 106 YILAKLGKYILAIKSYKEVIKLESSHFAAHYNLANILLELKKYTQAIK-LNPDYSTAY-- 162

Query: 70  QDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
               N+    ++L+ +   I   +KA++L+P    AY+ KG     L + E+AL +++K 
Sbjct: 163 ---SNKGIALAKLKKYNLAIESFNKAIELNPNNSYAYLNKGNILCTLAKYEQALELYDKT 219

Query: 130 YEHALHQ-SADLKQFLELEEL 149
            E  L+   A   + L LEEL
Sbjct: 220 IELDLNDYDAYFNKGLALEEL 240


>gi|404484473|ref|ZP_11019677.1| hypothetical protein HMPREF9448_00083 [Barnesiella intestinihominis
           YIT 11860]
 gi|404339478|gb|EJZ65909.1| hypothetical protein HMPREF9448_00083 [Barnesiella intestinihominis
           YIT 11860]
          Length = 693

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 37/287 (12%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  ++  F+Q++K  P   E    RG A+    + + A  D T  I+ NP    A++ RG
Sbjct: 43  YILSMQYFNQVIKVKPYMAEPYFYRGVAKLSLDDFKGAEEDCTLCIERNPFIVNAYQVRG 102

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR  LG+   AI D ++ L + P     L+ + I   + K ++ A +     + L    
Sbjct: 103 IARQNLGDYQGAIDDYTEGLRYAPEDRSFLNNKAIAEVQLKKYDEAEKSFDKLIALHPNY 162

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECL 574
            + Y          G+  KA +   KAI +D+    A+    + +   D A+ + AL  +
Sbjct: 163 YNGYMSRAQFYLEKGDTIKAIDDIDKAISIDKYISGAYAQRAIIKVLHD-ADYDSALADM 221

Query: 575 QQVLYIDKR-----FSKA-----------------------------YHLRGLLLHGLGQ 600
            + L +D +     F++A                             Y+ RGLL   +G+
Sbjct: 222 NEALRLDPKEVSYYFNRARIKYHQDDLQGAMADYDYILKLDPDNTMTYYNRGLLRMQVGE 281

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
             KAI D +  +  +P+N   +Y RA  Y  IG Y +AI D++  L+
Sbjct: 282 RNKAISDFTKVIKAEPNNYFAIYNRALLYDMIGNYGKAISDFNVVLE 328



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 3/217 (1%)

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           F + I+  P   E +  RG A+ +L +   A +D +  +E  P   +    RGI      
Sbjct: 50  FNQVIKVKPYMAEPYFYRGVAKLSLDDFKGAEEDCTLCIERNPFIVNAYQVRGIARQNLG 109

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
           D+  A++D +  ++   E++S      +A   + +Y +AE++  K I L  N+   +   
Sbjct: 110 DYQGAIDDYTEGLRYAPEDRSFLNNKAIAEVQLKKYDEAEKSFDKLIALHPNYYNGYMSR 169

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL--LHGLGQHKKAIKDLSSGLGID 615
            QFY +  ++ KA++ + + + IDK  S AY  R ++  LH    +  A+ D++  L +D
Sbjct: 170 AQFYLEKGDTIKAIDDIDKAISIDKYISGAYAQRAIIKVLHD-ADYDSALADMNEALRLD 228

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           P  +   + RA   +   + + A+ DYD  L L+ D+
Sbjct: 229 PKEVSYYFNRARIKYHQDDLQGAMADYDYILKLDPDN 265



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 1/264 (0%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RGIA+ N G Y  AI  + + L+  P     L  +  A    ++ + A   F + I  +P
Sbjct: 101 RGIARQNLGDYQGAIDDYTEGLRYAPEDRSFLNNKAIAEVQLKKYDEAEKSFDKLIALHP 160

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN-FKFKDFNAAVED 505
           +    +  R Q     G++++AI D+ KA+  +   +    +R I+      D+++A+ D
Sbjct: 161 NYYNGYMSRAQFYLEKGDTIKAIDDIDKAISIDKYISGAYAQRAIIKVLHDADYDSALAD 220

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           ++  ++LD +  S Y           + + A   +   ++LD +    + +       + 
Sbjct: 221 MNEALRLDPKEVSYYFNRARIKYHQDDLQGAMADYDYILKLDPDNTMTYYNRGLLRMQVG 280

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
              KA+    +V+  +     A + R LL   +G + KAI D +  L   P      Y R
Sbjct: 281 ERNKAISDFTKVIKAEPNNYFAIYNRALLYDMIGNYGKAISDFNVVLEQYPDFAAGFYAR 340

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
           +     +G+ +   KD+  A+DL+
Sbjct: 341 SDAKRKMGDMKGGEKDFMLAMDLQ 364



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 86/178 (48%), Gaps = 6/178 (3%)

Query: 377 KSISVDFRLSRGIAQ------VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           K+IS+D  +S   AQ      +++  Y SA++  ++ L+ DP        R   +  Q +
Sbjct: 188 KAISIDKYISGAYAQRAIIKVLHDADYDSALADMNEALRLDPKEVSYYFNRARIKYHQDD 247

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           L+ A++D+   ++ +P     +  RG  R  +GE  +AI D +K ++ EPN+   ++ R 
Sbjct: 248 LQGAMADYDYILKLDPDNTMTYYNRGLLRMQVGERNKAISDFTKVIKAEPNNYFAIYNRA 307

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           ++     ++  A+ D +  ++   +  + +     A   +G+ K  E+  + A+ L +
Sbjct: 308 LLYDMIGNYGKAISDFNVVLEQYPDFAAGFYARSDAKRKMGDMKGGEKDFMLAMDLQK 365



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 3/102 (2%)

Query: 380 SVDFRLSRGIAQVNEG---KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
           S DF LS   A  NE    +Y   +  ++++++  P +      RG  R  Q++   AI+
Sbjct: 578 SKDFSLSGLPAVGNESLKMEYEMVLRDYEKVIESAPRFIYVYYNRGNLRCSQQDYRGAIA 637

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
           D+TEAI+  P  G+A+  RG      G++V+   DLSKA E 
Sbjct: 638 DYTEAIRLRPDFGDAYYNRGLVYLKQGDTVKGTADLSKAGEL 679



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 58/137 (42%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           V +  +R   + ++     A++ +D ILK DP        RG  R    E   AISDFT+
Sbjct: 232 VSYYFNRARIKYHQDDLQGAMADYDYILKLDPDNTMTYYNRGLLRMQVGERNKAISDFTK 291

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            I++ P+   A   R      +G   +AI D +  LE  P+ A   + R     K  D  
Sbjct: 292 VIKAEPNNYFAIYNRALLYDMIGNYGKAISDFNVVLEQYPDFAAGFYARSDAKRKMGDMK 351

Query: 501 AAVEDLSACVKLDKENK 517
              +D    + L K+ +
Sbjct: 352 GGEKDFMLAMDLQKKTQ 368



 Score = 41.6 bits (96), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 40/87 (45%)

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           + + E E  + D+ + I+S P     +  RG  R +  +   AI D ++A+   P+  D 
Sbjct: 593 SLKMEYEMVLRDYEKVIESAPRFIYVYYNRGNLRCSQQDYRGAIADYTEAIRLRPDFGDA 652

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKL 512
            + RG+V  K  D      DLS   +L
Sbjct: 653 YYNRGLVYLKQGDTVKGTADLSKAGEL 679


>gi|299149165|ref|ZP_07042226.1| TPR domain protein [Bacteroides sp. 3_1_23]
 gi|423287416|ref|ZP_17266267.1| hypothetical protein HMPREF1069_01310 [Bacteroides ovatus
           CL02T12C04]
 gi|298512832|gb|EFI36720.1| TPR domain protein [Bacteroides sp. 3_1_23]
 gi|392672531|gb|EIY65998.1| hypothetical protein HMPREF1069_01310 [Bacteroides ovatus
           CL02T12C04]
          Length = 676

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD+NAA EDL + +K+    
Sbjct: 98  LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYNAAKEDLESLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            + +A+  LQQ
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------AARAIVKLQQ 205

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F++A  L          R L        + A+ D    L IDP+N    Y 
Sbjct: 206 AKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 265

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 266 RGLLRAQVGDDNRAIEDFDFVIKMEPDNM 294



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A + F++ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K AE+   K +  Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 361



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A +DF  AI  
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNRAIPL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 282 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 34/253 (13%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           ++ + +  Y +A    + +LK  P Y  A + RG     Q++  AA++DF +A++ +   
Sbjct: 132 LSHIQKKDYNAAKEDLESLLKVSPRYTRAYLMRGEVSLQQKDTIAALNDFNKALELDKYD 191

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +AW  R   +    +  EA  D ++A+     +A     R +  F   +   A+ D   
Sbjct: 192 PDAWAARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDL 251

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + +D  N             IG Y             +R  L A          + +  
Sbjct: 252 ALDIDPNN------------FIGHY-------------NRGLLRAQ---------VGDDN 277

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+E    V+ ++     A   RGLL    G ++ AI+D ++ +   P+ +   Y R+  
Sbjct: 278 RAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEA 337

Query: 629 YHAIGEYREAIKD 641
              IG+ + A +D
Sbjct: 338 RRKIGDKKGAEQD 350



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 116/286 (40%), Gaps = 16/286 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D+T  I   
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    + +R +AR  +G+   A QD     EF+   A I  + G+ N           D
Sbjct: 325 PNFLAGYYQRSEARRKIGDKKGAEQD-----EFKVMKAQIDKQNGVTNKDVAQNKDKEND 379

Query: 506 LSACVKLDKE-NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF---LEAWGHLTQFY 561
                K  K+ +K+   Y  + ++   E ++   +  +    D+N    LE    LT +Y
Sbjct: 380 EEGGEKTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNITLEPMFALT-YY 438

Query: 562 QDLA------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           + ++      N  K +E L +   + KR         L    +  H   I   +S +  D
Sbjct: 439 EKMSDVKRSVNFHKYIEDLNRTGILPKRLRITNMEAPLTEEQVKVHFALIDTHTSAIVED 498

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             N    + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 499 DKNASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 544



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AI+ NP   +A+  RG     LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 644

Query: 464 ESVEAIQDLSKALEF 478
            +   I DLSKA E 
Sbjct: 645 NNKLGISDLSKAGEL 659



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D   A +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 350 DEFKVMKAQIDKQN 363


>gi|428217630|ref|YP_007102095.1| hypothetical protein Pse7367_1375 [Pseudanabaena sp. PCC 7367]
 gi|427989412|gb|AFY69667.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
           sp. PCC 7367]
          Length = 317

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 132/286 (46%), Gaps = 14/286 (4%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           +++ S+ ++++++    +GI    +G++A AI+ +DQ+L   P   +A   R +A    +
Sbjct: 1   MSQGSEDQNLAIEALFLKGINMSRDGRFADAIAFYDQVLAIQPNDYQAWYNRASALFSLQ 60

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           + E A++ + +A+   P + EAW  RG          EAI     A +   +     + R
Sbjct: 61  DYEGAVASYDKALTIYPDSPEAWYNRGSVLLNCNRLEEAIDSYEHATDLRSDYYQAWYSR 120

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
                K   +  A+E     +++  +   A+   G++L  +  +K+A EA  +A++L+  
Sbjct: 121 ASTFLKLLRYAEALESCLRTIEIQPDYHPAWYGKGVSLFGLRRHKEAVEAFDRALELNPR 180

Query: 550 FLEAWGH-------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
             +AW H       L Q+ Q +++ EKALE       ID      ++ +GL L+ + +  
Sbjct: 181 RDKAWFHRGLAQMGLGQYTQAVSSFEKALE-------IDPDKRDVWYHQGLALYHMDRLD 233

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           +AI      L + P N    Y  A CY    E   AI +   A++L
Sbjct: 234 EAIASYEEALSMLPKNGTLYYNIACCYSLQREAMAAIANLQHAIEL 279



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 94/205 (45%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G   +AI    + L  +PN     + R    F  +D+  AV      + +  ++  A+  
Sbjct: 26  GRFADAIAFYDQVLAIQPNDYQAWYNRASALFSLQDYEGAVASYDKALTIYPDSPEAWYN 85

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            G  L +    ++A +++  A  L  ++ +AW      +  L    +ALE   + + I  
Sbjct: 86  RGSVLLNCNRLEEAIDSYEHATDLRSDYYQAWYSRASTFLKLLRYAEALESCLRTIEIQP 145

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
            +  A++ +G+ L GL +HK+A++     L ++P   +  + R      +G+Y +A+  +
Sbjct: 146 DYHPAWYGKGVSLFGLRRHKEAVEAFDRALELNPRRDKAWFHRGLAQMGLGQYTQAVSSF 205

Query: 643 DAALDLELDSMEKFVLQCLAFYQKE 667
           + AL+++ D  + +  Q LA Y  +
Sbjct: 206 EKALEIDPDKRDVWYHQGLALYHMD 230



 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 47/96 (48%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG+AQ+  G+Y  A+S F++ L+ DP   +    +G A      L+ AI+ + EA+  
Sbjct: 186 FHRGLAQMGLGQYTQAVSSFEKALEIDPDKRDVWYHQGLALYHMDRLDEAIASYEEALSM 245

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
            P  G  +       +   E++ AI +L  A+E  P
Sbjct: 246 LPKNGTLYYNIACCYSLQREAMAAIANLQHAIELNP 281



 Score = 43.9 bits (102), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 59/127 (46%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +G++     ++  A+  FD+ L+ +P   +A   RG A+    +   A+S F +A++ +P
Sbjct: 154 KGVSLFGLRRHKEAVEAFDRALELNPRRDKAWFHRGLAQMGLGQYTQAVSSFEKALEIDP 213

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              + W  +G A   +    EAI    +AL   P +  + +         ++  AA+ +L
Sbjct: 214 DKRDVWYHQGLALYHMDRLDEAIASYEEALSMLPKNGTLYYNIACCYSLQREAMAAIANL 273

Query: 507 SACVKLD 513
              ++L+
Sbjct: 274 QHAIELN 280


>gi|418056728|ref|ZP_12694780.1| Tetratricopeptide TPR_1 repeat-containing protein [Hyphomicrobium
           denitrificans 1NES1]
 gi|353209345|gb|EHB74750.1| Tetratricopeptide TPR_1 repeat-containing protein [Hyphomicrobium
           denitrificans 1NES1]
          Length = 575

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 116/270 (42%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R +A    G+   A+  +++ ++  P YP A   RG       +L+ A+ DF  A+   P
Sbjct: 73  RAVASARLGQTKLALEDYNRAVELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAP 132

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  R  A   LG+   AI+D +K++E  P SA  L  RG+        +AA+ D 
Sbjct: 133 GYAAAYSNRANAEMRLGKPDVAIRDFTKSIELMPASAPPLSGRGLAYLATDKPHAAIRDF 192

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  V  D    SAY     A  +IG+  +A E   +A+  D N  E +      Y    N
Sbjct: 193 SRAVSADARFASAYRNRAEARMTIGQRDEAIEDLSRAVAFDVNNTELYVVRGYAYLLNGN 252

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
           +  AL+     + +D + S A+  RGL          A  DL+  + +DP +      RA
Sbjct: 253 TASALKDFSHAIELDGKSSAAFEGRGLANSLAEAPDDAYADLNRAIELDPRSPVAYAFRA 312

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             Y    +     +D + A+ L+ +S E  
Sbjct: 313 VVYKQNNQPDIGARDVETAIKLDPNSPEAL 342



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 2/233 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R  A++  GK   AI  F + ++  P     L GRG A     +  AAI DF+ A+ ++
Sbjct: 140 NRANAEMRLGKPDVAIRDFTKSIELMPASAPPLSGRGLAYLATDKPHAAIRDFSRAVSAD 199

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                A++ R +AR  +G+  EAI+DLS+A+ F+ N+ ++   RG       +  +A++D
Sbjct: 200 ARFASAYRNRAEARMTIGQRDEAIEDLSRAVAFDVNNTELYVVRGYAYLLNGNTASALKD 259

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL-KAIQLDRNFLEAWGHLTQFYQDL 564
            S  ++LD ++ +A+   GLA +S+ E      A L +AI+LD     A+      Y+  
Sbjct: 260 FSHAIELDGKSSAAFEGRGLA-NSLAEAPDDAYADLNRAIELDPRSPVAYAFRAVVYKQN 318

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              +     ++  + +D    +A   RG +    G    AI DL   L + PS
Sbjct: 319 NQPDIGARDVETAIKLDPNSPEALWARGEIAEASGHADTAIADLRHVLQLKPS 371



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 111/269 (41%), Gaps = 10/269 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG   V  G+   A+  FD+ L   P Y  A   R  A     + + AI DFT++I+  
Sbjct: 106 NRGNLLVAVGQLDEAMKDFDRALVLAPGYAAAYSNRANAEMRLGKPDVAIRDFTKSIELM 165

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P++      RG A  A  +   AI+D S+A+  +   A     R          + A+ED
Sbjct: 166 PASAPPLSGRGLAYLATDKPHAAIRDFSRAVSADARFASAYRNRAEARMTIGQRDEAIED 225

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           LS  V  D  N   Y   G A    G    A +    AI+LD     A+       + LA
Sbjct: 226 LSRAVAFDVNNTELYVVRGYAYLLNGNTASALKDFSHAIELDGKSSAAFEG-----RGLA 280

Query: 566 NS-----EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           NS     + A   L + + +D R   AY  R ++     Q     +D+ + + +DP++ E
Sbjct: 281 NSLAEAPDDAYADLNRAIELDPRSPVAYAFRAVVYKQNNQPDIGARDVETAIKLDPNSPE 340

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLE 649
            L+ R     A G    AI D    L L+
Sbjct: 341 ALWARGEIAEASGHADTAIADLRHVLQLK 369



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 38/280 (13%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPE----ALIGRGTARAFQRELEAAISDFTEAI 442
           +G A++  G  A+A++ + + L++  +  +     L  R  A A   + + A+ D+  A+
Sbjct: 35  QGAAEMVRGDVATAVAAYTEALRDTGLANDRRATILNDRAVASARLGQTKLALEDYNRAV 94

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +  P    A+  RG    A+G+  EA++D  +AL   P  A     R     +    + A
Sbjct: 95  ELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAPGYAAAYSNRANAEMRLGKPDVA 154

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D +  ++L   +    +  GLA      Y   ++ H                      
Sbjct: 155 IRDFTKSIELMPASAPPLSGRGLA------YLATDKPH---------------------- 186

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
                  A+    + +  D RF+ AY  R      +GQ  +AI+DLS  +  D +N E  
Sbjct: 187 ------AAIRDFSRAVSADARFASAYRNRAEARMTIGQRDEAIEDLSRAVAFDVNNTELY 240

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
            +R   Y   G    A+KD+  A++L+  S   F  + LA
Sbjct: 241 VVRGYAYLLNGNTASALKDFSHAIELDGKSSAAFEGRGLA 280



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 6/221 (2%)

Query: 446 PSA---GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           PSA   G A   RG    A+    EA++D   A +     A IL++R + + +      A
Sbjct: 30  PSAAEQGAAEMVRGDVATAVAAYTEALRDTGLAND---RRATILNDRAVASARLGQTKLA 86

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +ED +  V+L  E   AY   G  L ++G+  +A +   +A+ L   +  A+ +      
Sbjct: 87  LEDYNRAVELFPEYPVAYNNRGNLLVAVGQLDEAMKDFDRALVLAPGYAAAYSNRANAEM 146

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
            L   + A+    + + +    +     RGL      +   AI+D S  +  D       
Sbjct: 147 RLGKPDVAIRDFTKSIELMPASAPPLSGRGLAYLATDKPHAAIRDFSRAVSADARFASAY 206

Query: 623 YLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
             RA     IG+  EAI+D   A+  ++++ E +V++  A+
Sbjct: 207 RNRAEARMTIGQRDEAIEDLSRAVAFDVNNTELYVVRGYAY 247


>gi|293372831|ref|ZP_06619209.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
 gi|292632206|gb|EFF50806.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
          Length = 652

 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 14  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 73

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD+NAA EDL + +K+    
Sbjct: 74  LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYNAAKEDLESLLKVSPRY 133

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            + +A+  LQQ
Sbjct: 134 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------AARAIVKLQQ 181

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F++A  L          R L        + A+ D    L IDP+N    Y 
Sbjct: 182 AKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 241

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 242 RGLLRAQVGDDNRAIEDFDFVIKMEPDNM 270



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A + F++ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 173 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 232

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 233 PNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 292

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K AE+   K +  Q+D+
Sbjct: 293 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 337



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A +DF  AI  
Sbjct: 138 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNRAIPL 197

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 198 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 257

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 258 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 307



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 34/253 (13%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           ++ + +  Y +A    + +LK  P Y  A + RG     Q++  AA++DF +A++ +   
Sbjct: 108 LSHIQKKDYNAAKEDLESLLKVSPRYTRAYLMRGEVSLQQKDTIAALNDFNKALELDKYD 167

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +AW  R   +    +  EA  D ++A+     +A     R +  F   +   A+ D   
Sbjct: 168 PDAWAARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDL 227

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + +D  N             IG Y             +R  L A          + +  
Sbjct: 228 ALDIDPNN------------FIGHY-------------NRGLLRAQ---------VGDDN 253

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+E    V+ ++     A   RGLL    G ++ AI+D ++ +   P+ +   Y R+  
Sbjct: 254 RAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEA 313

Query: 629 YHAIGEYREAIKD 641
              IG+ + A +D
Sbjct: 314 RRKIGDKKGAEQD 326



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 116/286 (40%), Gaps = 16/286 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D+T  I   
Sbjct: 241 NRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 300

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    + +R +AR  +G+   A QD     EF+   A I  + G+ N           D
Sbjct: 301 PNFLAGYYQRSEARRKIGDKKGAEQD-----EFKVMKAQIDKQNGVTNKDVAQNKDKEND 355

Query: 506 LSACVKLDKE-NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF---LEAWGHLTQFY 561
                K  K+ +K+   Y  + ++   E ++   +  +    D+N    LE    LT +Y
Sbjct: 356 EEGGEKTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNITLEPMFALT-YY 414

Query: 562 QDLA------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           + ++      N  K +E L +   + KR         L    +  H   I   +S +  D
Sbjct: 415 EKMSDVKRSVNFHKYIEDLNRTGILPKRLRITNMEAPLTEEQVKVHFALIDTHTSAIVED 474

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             N    + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 475 DKNASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 520



 Score = 45.1 bits (105), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AI+ NP   +A+  RG     LG
Sbjct: 561 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 620

Query: 464 ESVEAIQDLSKALEF 478
            +   I DLSKA E 
Sbjct: 621 NNKLGISDLSKAGEL 635



 Score = 44.3 bits (103), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 206 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKM 265

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D   A +
Sbjct: 266 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 325

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 326 DEFKVMKAQIDKQN 339


>gi|124024108|ref|YP_001018415.1| hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
           9303]
 gi|123964394|gb|ABM79150.1| Hypothetical protein P9303_24171 [Prochlorococcus marinus str. MIT
           9303]
          Length = 733

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 118/264 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S GI    EG++   I+I ++ LK +P Y +A    G A      LEAA+  F +A+  N
Sbjct: 53  SLGIIYGIEGRWQELIAILEKALKLEPNYSDAHNYIGIALKRLDNLEAAVESFQKALSIN 112

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  ++    G A    G+   AI  L  A++F+P+ ++  +  GI      +  AA+  
Sbjct: 113 PNCPKSNYNLGNALLEEGKLDSAIAFLKTAVDFKPDFSEAHYNLGIAYLAIDNIAAAINY 172

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
           L+  + L      A+  LGLAL + GE   A  + +KA+++   F EA  +L   Y +  
Sbjct: 173 LNNSLHLKPAFPEAHNSLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIYLNQG 232

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + E A+    + L +   + +A +  G+     G+   AI      L I     E  Y  
Sbjct: 233 DIETAINYFNKALLLKWNYPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNL 292

Query: 626 ASCYHAIGEYREAIKDYDAALDLE 649
            S Y   G    AI  +  AL L+
Sbjct: 293 GSIYLDQGNIETAINFFKKALILK 316



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 110/267 (41%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A + EGK  SAI+     +   P + EA    G A      + AAI+    ++   P+
Sbjct: 123 GNALLEEGKLDSAIAFLKTAVDFKPDFSEAHYNLGIAYLAIDNIAAAINYLNNSLHLKPA 182

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA    G A  A GE   AI    KALE +P   +  +  G +     D   A+   +
Sbjct: 183 FPEAHNSLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIYLNQGDIETAINYFN 242

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + L      A   LG+A  + GE   A  +  KA+++  +F E + +L   Y D  N 
Sbjct: 243 KALLLKWNYPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNI 302

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E A+   ++ L + + + +A +  G  L   G+   AI      L   PS  E       
Sbjct: 303 ETAINFFKKALILKENYPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGC 362

Query: 628 CYHAIGEYREAIKDYDAALDLELDSME 654
            Y A G+   +I+ +  AL L  D  E
Sbjct: 363 VYRAQGDLENSIRIFKKALALHPDHPE 389



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 84/204 (41%)

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           G   E I  L KAL+ EPN +D  +  GI   +  +  AAVE     + ++     +   
Sbjct: 62  GRWQELIAILEKALKLEPNYSDAHNYIGIALKRLDNLEAAVESFQKALSINPNCPKSNYN 121

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
           LG AL   G+   A      A+    +F EA  +L   Y  + N   A+  L   L++  
Sbjct: 122 LGNALLEEGKLDSAIAFLKTAVDFKPDFSEAHYNLGIAYLAIDNIAAAINYLNNSLHLKP 181

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
            F +A++  GL L   G+   AI      L I P   E  Y     Y   G+   AI  +
Sbjct: 182 AFPEAHNSLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIYLNQGDIETAINYF 241

Query: 643 DAALDLELDSMEKFVLQCLAFYQK 666
           + AL L+ +  E      +AF  K
Sbjct: 242 NKALLLKWNYPEALNNLGIAFKAK 265



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 109/258 (42%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S G+A   +G+   AIS F + L+  P +PEA    G     Q ++E AI+ F +A+   
Sbjct: 189 SLGLALQAKGEKNLAISSFIKALEIKPEFPEACYNLGFIYLNQGDIETAINYFNKALLLK 248

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  EA    G A  A GE   AI    KALE + +  ++ +  G +     +   A+  
Sbjct: 249 WNYPEALNNLGIAFKAKGEISPAINSWRKALEIKTDFPEVYYNLGSIYLDQGNIETAINF 308

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L +    A   LG +L   GE   A  A+ KA+    ++ EA  +L   Y+   
Sbjct: 309 FKKALILKENYPEALNNLGNSLQEKGELDAAIAAYKKALNHKPSYREAQNNLGCVYRAQG 368

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
           + E ++   ++ L +     +     G  L   G  + AI   ++ +  + +     Y  
Sbjct: 369 DLENSIRIFKKALALHPDHPEILSNLGTSLEEKGDLEAAISSFNNAISNNSNYPTAHYNL 428

Query: 626 ASCYHAIGEYREAIKDYD 643
           + C  + G+Y    + ++
Sbjct: 429 SLCLLSKGDYHNGWQQHE 446


>gi|159026094|emb|CAO86323.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 666

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 129/263 (49%), Gaps = 1/263 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
           +Y  A++ + Q LK +P Y EAL G+  A    +    A++ + +AIQ NP SA +AW  
Sbjct: 306 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 365

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG+A   L ++ EA++   + L   P ++     +  +  + + ++AA + L   +   +
Sbjct: 366 RGKALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQ 425

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +   +   G +L ++ +Y+ A +A+ +A+ ++ +    W         L     ALE  
Sbjct: 426 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 485

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            +    + +FS+A++ +G++L  LG++ +A++  +     + +  +    + +  H +  
Sbjct: 486 SKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLER 545

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
           ++EAI  Y+ A  +     E F+
Sbjct: 546 FQEAIASYEKARRISSRKSEVFI 568



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 126/263 (47%), Gaps = 7/263 (2%)

Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y+ A++ +++ ++ +P    +A +GRG A     + + A+  F   +  NP+A +AW+ 
Sbjct: 340 RYSEALNTYEKAIQINPDSAWQAWLGRGKALDKLDKNQEALESFERVLSLNPAASQAWQG 399

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      L +   A + L K L F+ N A I +++G      +D+  AV+     + ++ 
Sbjct: 400 KADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 459

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
           +N   +   G +L  + +   A E++ KA Q +  F +A  H +Q    Q L  + +ALE
Sbjct: 460 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQA--HYSQGIILQKLGRNSEALE 517

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY-LRASCYHA 631
              Q    +  + +A+  +G LLH L + ++AI        I     E    +  +CY  
Sbjct: 518 AFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYR- 576

Query: 632 IGEYREAIKDYDAALDLELDSME 654
           +G+Y +AI  Y  A+  + D+ E
Sbjct: 577 LGDYSQAITAYQQAIQRQKDNPE 599



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 8/210 (3%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +++G   ++ K +  A+      +K++ +   A      AL ++  Y +A   + KAIQ+
Sbjct: 295 YQQGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQI 354

Query: 547 DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           + +   +AW    +    L  +++ALE  ++VL ++   S+A+  +  +   L Q+  A 
Sbjct: 355 NPDSAWQAWLGRGKALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQ 414

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           K L   L    ++ +  Y +      + +Y  A+K YD AL +E D+        L +YQ
Sbjct: 415 KALEKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDN-------ALIWYQ 467

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           K  +LY  +KIN+    +   G  +P F +
Sbjct: 468 KGNSLYQLNKINNALESYSKAGQFNPQFSQ 497



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 79/182 (43%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A+  +DQ L  +         +G +     ++  A+  +++A Q NP   +A   +G
Sbjct: 444 YEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAHYSQG 503

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                LG + EA++  ++A +   N       +G +  + + F  A+       ++    
Sbjct: 504 IILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRK 563

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
              +  +G A   +G+Y +A  A+ +AIQ  ++  E W  L   +  L   E+A++  Q+
Sbjct: 564 SEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQE 623

Query: 577 VL 578
            L
Sbjct: 624 SL 625



 Score = 46.6 bits (109), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 34/262 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A     K   A+  F+++L  +P   +A  G+       ++  AA     + +  
Sbjct: 364 LGRGKALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTF 423

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             +  + W ++G +   L +   A++   +AL  E ++A I +++G   ++    N A+E
Sbjct: 424 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 483

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
             S   + + +   A+   G+ L  +G   +A EA  +A + + N+ +AW         L
Sbjct: 484 SYSKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 543

Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
            +F + +A+ EKA                           +   QQ +   K   + +  
Sbjct: 544 ERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKS 603

Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
            G     LGQ+++AI+     L
Sbjct: 604 LGNSWFKLGQYERAIQAYQESL 625



 Score = 43.1 bits (100), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 56/116 (48%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+  FT+A ++N +  +AW  +G     L    EAI    KA       +++    G   
Sbjct: 515 ALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAC 574

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           ++  D++ A+      ++  K+N   +  LG +   +G+Y++A +A+ ++++   N
Sbjct: 575 YRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 630


>gi|149176894|ref|ZP_01855504.1| TPR repeat [Planctomyces maris DSM 8797]
 gi|148844331|gb|EDL58684.1| TPR repeat [Planctomyces maris DSM 8797]
          Length = 485

 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 105/215 (48%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E    RG     Q +L  +  + T AI+ NP     +  RG A A L +   AI DL+KA
Sbjct: 82  EEFFLRGLEFQKQGKLAESTQELTMAIKLNPQVSRYYFHRGSAWADLKQDASAIVDLTKA 141

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           +E +P +A   + R +          AV+D +  ++   ++  A    GL  ++ G+ K+
Sbjct: 142 IEMDPKNAQYYYTRALFFMTRGGAELAVKDFTKAIECKPDSLQALNNRGLLFATTGKLKQ 201

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A     + +++  + ++A  +L     +L  ++KALE L +VL ++ ++  AY  RGL+ 
Sbjct: 202 ARADFERVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRGLVW 261

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
               ++ KAI D +  + + P++++    R + Y 
Sbjct: 262 QRRKEYDKAIADFTKAIELSPNSLKFYRQRMTVYQ 296



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 128/293 (43%), Gaps = 13/293 (4%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+    +GK A +       +K +P        RG+A A  ++  +AI D T+AI+ +P
Sbjct: 87  RGLEFQKQGKLAESTQELTMAIKLNPQVSRYYFHRGSAWADLKQDASAIVDLTKAIEMDP 146

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              + +  R       G +  A++D +KA+E +P+S   L+ RG++         A  D 
Sbjct: 147 KNAQYYYTRALFFMTRGGAELAVKDFTKAIECKPDSLQALNNRGLLFATTGKLKQARADF 206

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +++  ++  A   LG AL ++ E  KA E   + +QL+  +L A+ +    +Q    
Sbjct: 207 ERVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRGLVWQRRKE 266

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD------------LSSGLGI 614
            +KA+    + + +     K Y  R  +     Q +K   D            L+  L  
Sbjct: 267 YDKAIADFTKAIELSPNSLKFYRQRMTVYQLAEQPEKQKADEEKIIWLQKLAGLNERLAK 326

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
            P + E +  RA  Y A     +A+KDY   ++L  D+   + ++  A Y +E
Sbjct: 327 TPDDTELILERAQFYLASEMREKAMKDYAKIVELTQDTGRGYYIRG-ALYLEE 378



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 121/258 (46%), Gaps = 13/258 (5%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           R+ + K  S+D   + G A +N  +   A+ + +++L+ +P Y  A   RG     ++E 
Sbjct: 208 RVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRGLVWQRRKEY 267

Query: 432 EAAISDFTEAIQSNPSAGEAWKRR---------GQARAALGESV---EAIQDLSKALEFE 479
           + AI+DFT+AI+ +P++ + +++R          + + A  E +   + +  L++ L   
Sbjct: 268 DKAIADFTKAIELSPNSLKFYRQRMTVYQLAEQPEKQKADEEKIIWLQKLAGLNERLAKT 327

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           P+  +++ ER       +    A++D +  V+L ++    Y   G       +  +  + 
Sbjct: 328 PDDTELILERAQFYLASEMREKAMKDYAKIVELTQDTGRGYYIRGALYLEENKLDRCIQE 387

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
             +AI++     EA+      +    + E AL   ++   ID+  +KAY +R       G
Sbjct: 388 CSRAIKIQPQ-PEAYSVRGDAFMKQGDVEHALRDFERAKRIDEIVAKAYLMRSKSYKEQG 446

Query: 600 QHKKAIKDLSSGLGIDPS 617
           +HKKA +D    + IDPS
Sbjct: 447 EHKKAAQDYERAVAIDPS 464



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 128/287 (44%), Gaps = 18/287 (6%)

Query: 376 SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           +K+I +D     +  +R +  +  G    A+  F + ++  P   +AL  RG   A   +
Sbjct: 139 TKAIEMDPKNAQYYYTRALFFMTRGGAELAVKDFTKAIECKPDSLQALNNRGLLFATTGK 198

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
           L+ A +DF   ++  P + +A    G A   L E+ +A++ L++ L+  P   +    RG
Sbjct: 199 LKQARADFERVLEIKPDSIDAMNNLGFALMNLNETDKALEVLNRVLQLNPKYLNAYDNRG 258

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAY--TYLGLALSSIGEYKKAEEAHLKAIQ--- 545
           +V  + K+++ A+ D +  ++L   +   Y        L+   E +KA+E  +  +Q   
Sbjct: 259 LVWQRRKEYDKAIADFTKAIELSPNSLKFYRQRMTVYQLAEQPEKQKADEEKIIWLQKLA 318

Query: 546 -LDRNF------LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
            L+          E      QFY      EKA++   +++ + +   + Y++RG L    
Sbjct: 319 GLNERLAKTPDDTELILERAQFYLASEMREKAMKDYAKIVELTQDTGRGYYIRGALYLEE 378

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            +  + I++ S  + I P   E   +R   +   G+   A++D++ A
Sbjct: 379 NKLDRCIQECSRAIKIQPQP-EAYSVRGDAFMKQGDVEHALRDFERA 424


>gi|157412770|ref|YP_001483636.1| hypothetical protein P9215_04341 [Prochlorococcus marinus str. MIT
           9215]
 gi|157387345|gb|ABV50050.1| Hypothetical protein P9215_04341 [Prochlorococcus marinus str. MIT
           9215]
          Length = 1055

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 126/294 (42%), Gaps = 17/294 (5%)

Query: 372 RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            I     +S D    RG    +   Y ++I  + + + ++P +  A   RG ++    + 
Sbjct: 11  EIDTMDDLSADQLKERGDKNFSVKNYETSIEDYTKAIIKNPKFGRAYNNRGNSKLALGDF 70

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS--ADILHER 489
             A+SD+ E  +  P     +   G+A   L E  ++I   SKA+E + NS  ++    R
Sbjct: 71  NGALSDYLEGTKVEPLLPHNFHNIGRAYFQLQEYKKSIDYFSKAIELKDNSLKSESYRLR 130

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G         N A++DL   +++D  N  +   +  A   +G   ++  A  KAI+LD  
Sbjct: 131 GFCKINLNLSNEALDDLKKSLEIDPNNIESIGCIAYAKWQLGHVHESLIAANKAIRLDSE 190

Query: 550 FLEAW-------GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
              A        G L + Y+ + +  KAL         D      +  RG L   L  H+
Sbjct: 191 CKIALLARGICRGELNKNYEAIVDLNKALS--------DFLIPIGFLARGTLWQELNNHE 242

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           KAI D +S L I+P      + RA     IGEY +A+ D + A+D E D  + F
Sbjct: 243 KAIDDFTSALNIEPKLFTAYFNRAESQIMIGEYEKALIDINKAIDFEKDDGDYF 296



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 129/267 (48%), Gaps = 7/267 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ-- 443
           +RG +++  G +  A+S + +  K +P+ P      G A    +E + +I  F++AI+  
Sbjct: 59  NRGNSKLALGDFNGALSDYLEGTKVEPLLPHNFHNIGRAYFQLQEYKKSIDYFSKAIELK 118

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            N    E+++ RG  +  L  S EA+ DL K+LE +PN+ + +       ++    + ++
Sbjct: 119 DNSLKSESYRLRGFCKINLNLSNEALDDLKKSLEIDPNNIESIGCIAYAKWQLGHVHESL 178

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FY 561
              +  ++LD E K A    G+     GE  K  EA +   +   +FL   G L +   +
Sbjct: 179 IAANKAIRLDSECKIALLARGICR---GELNKNYEAIVDLNKALSDFLIPIGFLARGTLW 235

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           Q+L N EKA++     L I+ +   AY  R      +G+++KA+ D++  +  +  + + 
Sbjct: 236 QELNNHEKAIDDFTSALNIEPKLFTAYFNRAESQIMIGEYEKALIDINKAIDFEKDDGDY 295

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL 648
            Y R      + + +EA KD+  A +L
Sbjct: 296 FYRRGFIKTYLKQNKEAKKDFLKAEEL 322



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 6/149 (4%)

Query: 373 ISKSKSISVDFR-----LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
           I+ +K+I +D       L+RGI +    K   AI   ++ L  D + P   + RGT    
Sbjct: 179 IAANKAIRLDSECKIALLARGICRGELNKNYEAIVDLNKALS-DFLIPIGFLARGTLWQE 237

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
               E AI DFT A+   P    A+  R +++  +GE  +A+ D++KA++FE +  D  +
Sbjct: 238 LNNHEKAIDDFTSALNIEPKLFTAYFNRAESQIMIGEYEKALIDINKAIDFEKDDGDYFY 297

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            RG +    K    A +D     +L   N
Sbjct: 298 RRGFIKTYLKQNKEAKKDFLKAEELGNRN 326


>gi|27375838|ref|NP_767367.1| hypothetical protein blr0727 [Bradyrhizobium japonicum USDA 110]
 gi|27348976|dbj|BAC45992.1| blr0727 [Bradyrhizobium japonicum USDA 110]
          Length = 370

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 136/290 (46%), Gaps = 4/290 (1%)

Query: 363 KRNKKFCVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALI 419
           KR+K       S +  I  +F  +   RG A   +G    A++ +++ ++ DP Y  +  
Sbjct: 62  KRDKDRAFEDCSAAIRIDPNFGRAYNCRGRAYSAKGDRDRAMADYNEAIRLDPGYGPSYT 121

Query: 420 GRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
            R      +R+ + AI+ FTEAI+ NP  A  A   RG+A AA G++  A+ D ++A++ 
Sbjct: 122 SRAQEYFNRRDFDLAIAGFTEAIERNPKQAYFATVMRGEAYAAKGDTDHAVADYTEAMQR 181

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
            P +A     R  V+F   + + A++D ++ V+L+  +   +    + L    +   A  
Sbjct: 182 NPAAAWPYELRSAVHFDKGEIDEALDDCNSAVRLEPGSAGGHYCRAVVLVKKDDPDGAIR 241

Query: 539 AHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
              +  ++   F++A+      +    + + A+    + + +    S AY+ R      +
Sbjct: 242 EFDEVTRIAPAFVKAYLARAVAWHKKGDDKHAIADFDEAIRLQPGNSTAYNNRAAAFRDM 301

Query: 599 GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           GQH +A+ D +  L +DP N + L  R   Y  + + + A  D+++ L L
Sbjct: 302 GQHDRALADYNEALRLDPKNQDVLANRGLLYMMMSDAKHARADFNSVLAL 351



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 108/234 (46%), Gaps = 1/234 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPE-ALIGRGTARAFQRELEAAISDFTEAIQS 444
           SR     N   +  AI+ F + ++ +P     A + RG A A + + + A++D+TEA+Q 
Sbjct: 122 SRAQEYFNRRDFDLAIAGFTEAIERNPKQAYFATVMRGEAYAAKGDTDHAVADYTEAMQR 181

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+A   ++ R       GE  EA+ D + A+  EP SA   + R +V  K  D + A+ 
Sbjct: 182 NPAAAWPYELRSAVHFDKGEIDEALDDCNSAVRLEPGSAGGHYCRAVVLVKKDDPDGAIR 241

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           +     ++      AY    +A    G+ K A     +AI+L      A+ +    ++D+
Sbjct: 242 EFDEVTRIAPAFVKAYLARAVAWHKKGDDKHAIADFDEAIRLQPGNSTAYNNRAAAFRDM 301

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
              ++AL    + L +D +       RGLL   +   K A  D +S L + P++
Sbjct: 302 GQHDRALADYNEALRLDPKNQDVLANRGLLYMMMSDAKHARADFNSVLALPPTD 355



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R +  V +     AI  FD++ +  P + +A + R  A   + + + AI+DF EAI+  P
Sbjct: 226 RAVVLVKKDDPDGAIREFDEVTRIAPAFVKAYLARAVAWHKKGDDKHAIADFDEAIRLQP 285

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  R  A   +G+   A+ D ++AL  +P + D+L  RG++     D   A  D 
Sbjct: 286 GNSTAYNNRAAAFRDMGQHDRALADYNEALRLDPKNQDVLANRGLLYMMMSDAKHARADF 345

Query: 507 SACVKLDKENK 517
           ++ + L   +K
Sbjct: 346 NSVLALPPTDK 356



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 56/266 (21%), Positives = 109/266 (40%), Gaps = 39/266 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I++ TE I ++P+   A++ RG+A     +   A +D S A+  +PN     + RG    
Sbjct: 35  IAEKTEIIVADPTNAVAYELRGEAWYMKRDKDRAFEDCSAAIRIDPNFGRAYNCRGRAYS 94

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYT-----YL-------------------------- 523
              D + A+ D +  ++LD     +YT     Y                           
Sbjct: 95  AKGDRDRAMADYNEAIRLDPGYGPSYTSRAQEYFNRRDFDLAIAGFTEAIERNPKQAYFA 154

Query: 524 ----GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALECLQQV 577
               G A ++ G+   A   + +A+Q  RN   AW +   +  + D    ++AL+     
Sbjct: 155 TVMRGEAYAAKGDTDHAVADYTEAMQ--RNPAAAWPYELRSAVHFDKGEIDEALDDCNSA 212

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
           + ++   +  ++ R ++L        AI++      I P+ ++    RA  +H  G+ + 
Sbjct: 213 VRLEPGSAGGHYCRAVVLVKKDDPDGAIREFDEVTRIAPAFVKAYLARAVAWHKKGDDKH 272

Query: 638 AIKDYDAALDLELDSMEKFVLQCLAF 663
           AI D+D A+ L+  +   +  +  AF
Sbjct: 273 AIADFDEAIRLQPGNSTAYNNRAAAF 298


>gi|423224738|ref|ZP_17211206.1| hypothetical protein HMPREF1062_03392 [Bacteroides cellulosilyticus
           CL02T12C19]
 gi|392634694|gb|EIY28609.1| hypothetical protein HMPREF1062_03392 [Bacteroides cellulosilyticus
           CL02T12C19]
          Length = 678

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 118/287 (41%), Gaps = 38/287 (13%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    RG A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDFQGAEADCNAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR        AI+D   AL+++P +  + H   + + + +D+ AA EDL   +K+    
Sbjct: 98  LARIRQNNYDGAIEDYKTALKYDPENLVLWHNLSLCHMQKEDYGAAKEDLGKLLKIAPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG--------------------- 555
             AY   G       +  +A     KAI++DR   + WG                     
Sbjct: 158 TRAYLMRGEVSLKQKDTIQALNDFEKAIEMDRYDPDGWGARAIVRLQQGKYADAEADLDH 217

Query: 556 --HLT-------------QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
             HL+             +F+Q+  N   A+      L ID      ++ RGLL   +G 
Sbjct: 218 SIHLSAKNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGD 275

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
             +AI+D    L I+P N+   + R       G YR AI DY   +D
Sbjct: 276 DNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYRGAISDYSRVID 322



 Score = 67.0 bits (162), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ +GKYA A +  D  +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVRLQQGKYADAEADLDHSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    L+ EP++      RG++  +  ++  A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYRGAISD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
            S  +       + Y +   A   IG+ K AE+   K +++
Sbjct: 317 YSRVIDEYPNFMAGYYHRAEARKKIGDRKGAEQDEFKLMKM 357



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 12/271 (4%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALI---GRGTARAFQRELEAAISDFTEAIQ 443
           RG+A++ +  Y  AI  +   LK DP   E L+           + +  AA  D  + ++
Sbjct: 96  RGLARIRQNNYDGAIEDYKTALKYDP---ENLVLWHNLSLCHMQKEDYGAAKEDLGKLLK 152

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
             P    A+  RG+      ++++A+ D  KA+E +    D    R IV  +   +  A 
Sbjct: 153 IAPRYTRAYLMRGEVSLKQKDTIQALNDFEKAIEMDRYDPDGWGARAIVRLQQGKYADAE 212

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--F 560
            DL   + L  +N   Y    LA       + A   +  A+ +D  NFL   GH  +   
Sbjct: 213 ADLDHSIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFL---GHYNRGLL 269

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
              + +  +A+E    VL I+     A   RGLL    G ++ AI D S  +   P+ + 
Sbjct: 270 RAQVGDDNRAIEDFDFVLQIEPDNMMATFNRGLLRAQTGNYRGAISDYSRVIDEYPNFMA 329

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELD 651
             Y RA     IG+ + A +D    + +++D
Sbjct: 330 GYYHRAEARKKIGDRKGAEQDEFKLMKMQID 360



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 57/137 (41%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   +Q 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLQI 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G    AI D S+ ++  PN     + R     K  D   A +
Sbjct: 290 EPDNMMATFNRGLLRAQTGNYRGAISDYSRVIDEYPNFMAGYYHRAEARKKIGDRKGAEQ 349

Query: 505 DLSACVKLDKENKSAYT 521
           D    +K+  + ++  T
Sbjct: 350 DEFKLMKMQIDKRNGVT 366



 Score = 43.5 bits (101), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 66/158 (41%), Gaps = 33/158 (20%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
           RG+  +  +DF ++++D +  + LD +   AY    L      EYKKAE A L       
Sbjct: 507 RGLDFYLVQDFASSIDDFTQAILLDDKFFPAYFMRALVRYKQLEYKKAE-AELTEGVPGA 565

Query: 542 -----------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
                                    IQL  +F+  + +       L +   ALE   + +
Sbjct: 566 SSDSKKQPEVTSIDYDIVKNDLDHVIQLAPDFVYGYYNRANVLSMLKDYRGALEDYNKAI 625

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
            ++K F++AY  RGL    LG +K+ I DLS    LGI
Sbjct: 626 ELNKDFAEAYFNRGLTHIFLGNNKQGITDLSKAGELGI 663



 Score = 40.8 bits (94), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 37/80 (46%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D +++  P +      R    +  ++   A+ D+ +AI+ N    EA+  RG     LG
Sbjct: 587 LDHVIQLAPDFVYGYYNRANVLSMLKDYRGALEDYNKAIELNKDFAEAYFNRGLTHIFLG 646

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            + + I DLSKA E    SA
Sbjct: 647 NNKQGITDLSKAGELGIVSA 666


>gi|334121455|ref|ZP_08495523.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
            vaginatus FGP-2]
 gi|333454974|gb|EGK83641.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
            vaginatus FGP-2]
          Length = 1052

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 121/264 (45%)

Query: 385  LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            + +G+A  N  +Y  A+  F++ +  DP   +A   RG  +      E  +    +A+  
Sbjct: 761  VGQGVALGNLERYEEALESFEKAIDLDPESVDAWANRGAVQGNLERYEEGLESCEKALHL 820

Query: 445  NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            +P +  AW  RG     L    EA++   KAL+  P S D   +RG +  K + +  A+E
Sbjct: 821  DPKSVYAWVNRGNTLNNLERYEEALESYQKALDLAPKSVDAWVKRGNMLRKLERYEEALE 880

Query: 505  DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                 + L  ++  A+   G+AL  +  Y++   A  +A ++D   L+A          L
Sbjct: 881  SYQKVIDLAPKSVDAWVNQGIALLDLERYEEVFTACDRAFKIDSKNLQALNTQALALSLL 940

Query: 565  ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             N EKA+  + + + ++ +       RG++L   G++ +A+ +    +  +P +    Y 
Sbjct: 941  KNFEKAITAIDEAISLNPQEVILRANRGIILARAGRYTEALAECEQAIEQNPKHESGYYG 1000

Query: 625  RASCYHAIGEYREAIKDYDAALDL 648
            +A CY   GE  +AI +   A+D+
Sbjct: 1001 KACCYALQGEIEQAIDNLQKAIDI 1024



 Score = 77.0 bits (188), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 107/252 (42%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+  + + L+ D       +G+G A       E A+  F +AI  +P + +AW  R
Sbjct: 738 RYKDALDCYQKALELDQGNASTFVGQGVALGNLERYEEALESFEKAIDLDPESVDAWANR 797

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G  +  L    E ++   KAL  +P S      RG      + +  A+E     + L  +
Sbjct: 798 GAVQGNLERYEEGLESCEKALHLDPKSVYAWVNRGNTLNNLERYEEALESYQKALDLAPK 857

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +  A+   G  L  +  Y++A E++ K I L    ++AW +      DL   E+      
Sbjct: 858 SVDAWVKRGNMLRKLERYEEALESYQKVIDLAPKSVDAWVNQGIALLDLERYEEVFTACD 917

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           +   ID +  +A + + L L  L   +KAI  +   + ++P  +     R       G Y
Sbjct: 918 RAFKIDSKNLQALNTQALALSLLKNFEKAITAIDEAISLNPQEVILRANRGIILARAGRY 977

Query: 636 REAIKDYDAALD 647
            EA+ + + A++
Sbjct: 978 TEALAECEQAIE 989



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 90/169 (53%), Gaps = 3/169 (1%)

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           ++KD   A++     ++LD+ N S +   G+AL ++  Y++A E+  KAI LD   ++AW
Sbjct: 738 RYKD---ALDCYQKALELDQGNASTFVGQGVALGNLERYEEALESFEKAIDLDPESVDAW 794

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            +      +L   E+ LE  ++ L++D +   A+  RG  L+ L ++++A++     L +
Sbjct: 795 ANRGAVQGNLERYEEGLESCEKALHLDPKSVYAWVNRGNTLNNLERYEEALESYQKALDL 854

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            P +++    R +    +  Y EA++ Y   +DL   S++ +V Q +A 
Sbjct: 855 APKSVDAWVKRGNMLRKLERYEEALESYQKVIDLAPKSVDAWVNQGIAL 903



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 100/215 (46%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+  + +A++ +      +  +G A   L    EA++   KA++ +P S D    RG V 
Sbjct: 742 ALDCYQKALELDQGNASTFVGQGVALGNLERYEEALESFEKAIDLDPESVDAWANRGAVQ 801

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
              + +   +E     + LD ++  A+   G  L+++  Y++A E++ KA+ L    ++A
Sbjct: 802 GNLERYEEGLESCEKALHLDPKSVYAWVNRGNTLNNLERYEEALESYQKALDLAPKSVDA 861

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           W       + L   E+ALE  Q+V+ +  +   A+  +G+ L  L ++++          
Sbjct: 862 WVKRGNMLRKLERYEEALESYQKVIDLAPKSVDAWVNQGIALLDLERYEEVFTACDRAFK 921

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           ID  N++ L  +A     +  + +AI   D A+ L
Sbjct: 922 IDSKNLQALNTQALALSLLKNFEKAITAIDEAISL 956



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 4/206 (1%)

Query: 462 LGESVEAIQD----LSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
           L ES E  +D      KALE +  +A     +G+     + +  A+E     + LD E+ 
Sbjct: 732 LLESAERYKDALDCYQKALELDQGNASTFVGQGVALGNLERYEEALESFEKAIDLDPESV 791

Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
            A+   G    ++  Y++  E+  KA+ LD   + AW +      +L   E+ALE  Q+ 
Sbjct: 792 DAWANRGAVQGNLERYEEGLESCEKALHLDPKSVYAWVNRGNTLNNLERYEEALESYQKA 851

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYRE 637
           L +  +   A+  RG +L  L ++++A++     + + P +++    +      +  Y E
Sbjct: 852 LDLAPKSVDAWVKRGNMLRKLERYEEALESYQKVIDLAPKSVDAWVNQGIALLDLERYEE 911

Query: 638 AIKDYDAALDLELDSMEKFVLQCLAF 663
                D A  ++  +++    Q LA 
Sbjct: 912 VFTACDRAFKIDSKNLQALNTQALAL 937



 Score = 42.0 bits (97), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 3/86 (3%)

Query: 364  RNKKFCVTRISKSKSIS---VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
            +N +  +T I ++ S++   V  R +RGI     G+Y  A++  +Q ++++P +     G
Sbjct: 941  KNFEKAITAIDEAISLNPQEVILRANRGIILARAGRYTEALAECEQAIEQNPKHESGYYG 1000

Query: 421  RGTARAFQRELEAAISDFTEAIQSNP 446
            +    A Q E+E AI +  +AI   P
Sbjct: 1001 KACCYALQGEIEQAIDNLQKAIDIAP 1026



 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 33/61 (54%)

Query: 73  CNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEH 132
            NR      LE ++  +  C+KAL LDP  + A++ +G   + L R EEAL  ++K  + 
Sbjct: 795 ANRGAVQGNLERYEEGLESCEKALHLDPKSVYAWVNRGNTLNNLERYEEALESYQKALDL 854

Query: 133 A 133
           A
Sbjct: 855 A 855


>gi|440683182|ref|YP_007157977.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428680301|gb|AFZ59067.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 534

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 114/234 (48%), Gaps = 6/234 (2%)

Query: 375 KSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAA 434
           K +  ++ ++L  G+     G Y  AI  + Q +  +  Y +A   RG A       + A
Sbjct: 270 KHQDANIYYKL--GLVYHQLGDYKKAIIDYSQAINININYSQAYNKRGLAHYQLGNYQTA 327

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I D+ +AI+ NP     ++ R +AR+ +G+   AI+D ++A++  P  A     R I  +
Sbjct: 328 IEDYNQAIRINPDVAVNYRNRAEARSHIGDHQGAIEDYNQAIKINPLDAITQKNREITRY 387

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D    V +    +K+  ++  AY   G      G Y+ A E + +AIQ++ N+ +A+
Sbjct: 388 LLDDQQKLVPE----IKIAPDDAVAYKNRGNTRLECGNYEGAIEDYNQAIQINPNYADAY 443

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            +    + DL N E A++   +V+ +   ++ AY+ RG +   +G  + AI+D 
Sbjct: 444 YNRGNAHSDLGNYEAAIDDFSKVIKVKSNYTDAYYNRGNVRLIIGDKQGAIEDF 497



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 31/170 (18%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPM------------------- 413
           I  +  ++V++R +R  A+ + G +  AI  ++Q +K +P+                   
Sbjct: 335 IRINPDVAVNYR-NRAEARSHIGDHQGAIEDYNQAIKINPLDAITQKNREITRYLLDDQQ 393

Query: 414 --YPEALIG---------RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAAL 462
              PE  I          RG  R      E AI D+ +AIQ NP+  +A+  RG A + L
Sbjct: 394 KLVPEIKIAPDDAVAYKNRGNTRLECGNYEGAIEDYNQAIQINPNYADAYYNRGNAHSDL 453

Query: 463 GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
           G    AI D SK ++ + N  D  + RG V     D   A+ED      L
Sbjct: 454 GNYEAAIDDFSKVIKVKSNYTDAYYNRGNVRLIIGDKQGAIEDFQQAADL 503



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 68/136 (50%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           NS  I  + G   F+  D+ AA+ + +  ++   ++ + Y  LGL    +G+YKKA   +
Sbjct: 238 NSTLIYEKLGDKYFQKGDYAAAINNYNQALQDKHQDANIYYKLGLVYHQLGDYKKAIIDY 297

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            +AI ++ N+ +A+      +  L N + A+E   Q + I+   +  Y  R      +G 
Sbjct: 298 SQAINININYSQAYNKRGLAHYQLGNYQTAIEDYNQAIRINPDVAVNYRNRAEARSHIGD 357

Query: 601 HKKAIKDLSSGLGIDP 616
           H+ AI+D +  + I+P
Sbjct: 358 HQGAIEDYNQAIKINP 373


>gi|434394467|ref|YP_007129414.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
           PCC 7428]
 gi|428266308|gb|AFZ32254.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
           PCC 7428]
          Length = 256

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 88/171 (51%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           +K I+ +   ++G+ ++ +  Y+ AI  F Q L+ +  +  A + RG  R    + E AI
Sbjct: 66  TKEINAEQFTNQGLEKLQQQDYSGAIQAFSQALQLNSNHEMAYVYRGDTRQKLEDYEGAI 125

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            D+T A+QSNP+    +  RG AR ALG+   AI D ++A++  P  A    +RG V  +
Sbjct: 126 EDYTLALQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYPEDAFGYSDRGSVYLQ 185

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
             +   A+EDL+  ++++ E   AY +     +     +   + +  AIQL
Sbjct: 186 IGNIGKAIEDLNKAIQINPERAEAYFHRAQVHAKFKNRQATLQDYRTAIQL 236



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/157 (30%), Positives = 75/157 (47%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           E    +G  +  Q++   AI  F++A+Q N +   A+  RG  R  L +   AI+D + A
Sbjct: 72  EQFTNQGLEKLQQQDYSGAIQAFSQALQLNSNHEMAYVYRGDTRQKLEDYEGAIEDYTLA 131

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L+  PN A I + RG       D+ +A+ D +  +KL  E+   Y+  G     IG   K
Sbjct: 132 LQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYPEDAFGYSDRGSVYLQIGNIGK 191

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           A E   KAIQ++    EA+ H  Q +    N +  L+
Sbjct: 192 AIEDLNKAIQINPERAEAYFHRAQVHAKFKNRQATLQ 228



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/129 (29%), Positives = 64/129 (49%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG  +     Y  AI  +   L+ +P +      RG AR    + ++AI+D+T+AI+  P
Sbjct: 111 RGDTRQKLEDYEGAIEDYTLALQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYP 170

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                +  RG     +G   +AI+DL+KA++  P  A+    R  V+ KFK+  A ++D 
Sbjct: 171 EDAFGYSDRGSVYLQIGNIGKAIEDLNKAIQINPERAEAYFHRAQVHAKFKNRQATLQDY 230

Query: 507 SACVKLDKE 515
              ++L  E
Sbjct: 231 RTAIQLYTE 239



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 78/167 (46%)

Query: 482 SADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL 541
           +A+    +G+   + +D++ A++  S  ++L+  ++ AY Y G     + +Y+ A E + 
Sbjct: 70  NAEQFTNQGLEKLQQQDYSGAIQAFSQALQLNSNHEMAYVYRGDTRQKLEDYEGAIEDYT 129

Query: 542 KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
            A+Q + NF   +         L + + A+    Q + +    +  Y  RG +   +G  
Sbjct: 130 LALQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYPEDAFGYSDRGSVYLQIGNI 189

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            KAI+DL+  + I+P   E  + RA  +      +  ++DY  A+ L
Sbjct: 190 GKAIEDLNKAIQINPERAEAYFHRAQVHAKFKNRQATLQDYRTAIQL 236



 Score = 52.8 bits (125), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 6/104 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG---RGTARAFQRELEAAISDFTEAI 442
           SRG A+V  G Y SAI+ + Q +K   +YPE   G   RG+       +  AI D  +AI
Sbjct: 144 SRGDARVALGDYQSAIADYTQAIK---LYPEDAFGYSDRGSVYLQIGNIGKAIEDLNKAI 200

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           Q NP   EA+  R Q  A        +QD   A++      +I+
Sbjct: 201 QINPERAEAYFHRAQVHAKFKNRQATLQDYRTAIQLYTEQGNIV 244



 Score = 50.4 bits (119), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 64/141 (45%)

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           N   +T  GL      +Y  A +A  +A+QL+ N   A+ +     Q L + E A+E   
Sbjct: 70  NAEQFTNQGLEKLQQQDYSGAIQAFSQALQLNSNHEMAYVYRGDTRQKLEDYEGAIEDYT 129

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
             L  +  F+  Y+ RG     LG ++ AI D +  + + P +      R S Y  IG  
Sbjct: 130 LALQSNPNFAYIYNSRGDARVALGDYQSAIADYTQAIKLYPEDAFGYSDRGSVYLQIGNI 189

Query: 636 REAIKDYDAALDLELDSMEKF 656
            +AI+D + A+ +  +  E +
Sbjct: 190 GKAIEDLNKAIQINPERAEAY 210


>gi|300864617|ref|ZP_07109475.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
 gi|300337366|emb|CBN54623.1| TPR repeat protein [Oscillatoria sp. PCC 6506]
          Length = 561

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 134/312 (42%), Gaps = 14/312 (4%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  R    K  S    + RG A ++  +Y  A+  F+Q  +  P   EA   RG A    
Sbjct: 86  CCDRAIGIKPESYKAWVLRGSALLSLHQYQEALVSFEQATQIQPQNYEAWHYRGRALEEL 145

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + A + + +AI+  P+    W R+G          EA+    + ++ +P +A+    
Sbjct: 146 HQYQTAAACYRKAIEIKPNLPTIWYRQGCTLLHGDRYAEAVAAFERVVKLQPGNAEAWFY 205

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG+   K   +  +V      V+L  EN  A+   G+AL  +  Y +A  ++ + IQL  
Sbjct: 206 RGLALMKALRYAESVSSYDRAVQLQPENYQAWFNRGIALEKLHRYAEAVNSYDRVIQLQP 265

Query: 549 NFLEAWGHLTQFYQDLA----NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
              EAW     FY+ +A      + A+  L Q + I+  F + +   G +L   G  + A
Sbjct: 266 GDSEAW-----FYKGMALKHLRPDAAIATLNQAIKINPNFPELWIGFGQVLSEAGHWEGA 320

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF-----VLQ 659
           I        ++P+  E    R      +  YREAI  Y  AL L+ D +E +      L+
Sbjct: 321 IASFDKATQLNPNFPEAWLGRGLALAGMEHYREAIIAYSNALQLKGDFLEAWNYRGEALE 380

Query: 660 CLAFYQKEIALY 671
            L  Y++ IA +
Sbjct: 381 KLHRYEEAIACF 392



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 119/276 (43%), Gaps = 38/276 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RGIA     +YA A++ +D++++  P   EA   +G A    R  +AAI+   +AI+ 
Sbjct: 238 FNRGIALEKLHRYAEAVNSYDRVIQLQPGDSEAWFYKGMALKHLRP-DAAIATLNQAIKI 296

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP+  E W   GQ  +  G    AI    KA +  PN  +                    
Sbjct: 297 NPNFPELWIGFGQVLSEAGHWEGAIASFDKATQLNPNFPE-------------------- 336

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                         A+   GLAL+ +  Y++A  A+  A+QL  +FLEAW +  +  + L
Sbjct: 337 --------------AWLGRGLALAGMEHYREAIIAYSNALQLKGDFLEAWNYRGEALEKL 382

Query: 565 ANSEKALECLQQVLYIDKRF---SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
              E+A+ C  +V+ +       SK    RG  L  L ++ +AI      L + P N E 
Sbjct: 383 HRYEEAIACFDKVIAMTSELDISSKVGFQRGAALEKLERYAEAIAAYDQVLLLQPDNFEA 442

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
              R +    +  Y +A+  Y+  + +  D+ + ++
Sbjct: 443 WLKRGNALALMQRYEDALIAYNQGIAIWPDNYQVWL 478



 Score = 80.5 bits (197), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 5/263 (1%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           +AI+  +Q +K +P +PE  IG G   +     E AI+ F +A Q NP+  EAW  RG A
Sbjct: 285 AAIATLNQAIKINPNFPELWIGFGQVLSEAGHWEGAIASFDKATQLNPNFPEAWLGRGLA 344

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV----KLDK 514
            A +    EAI   S AL+ + +  +  + RG    K   +  A+      +    +LD 
Sbjct: 345 LAGMEHYREAIIAYSNALQLKGDFLEAWNYRGEALEKLHRYEEAIACFDKVIAMTSELDI 404

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +K  +   G AL  +  Y +A  A+ + + L  +  EAW         +   E AL   
Sbjct: 405 SSKVGFQ-RGAALEKLERYAEAIAAYDQVLLLQPDNFEAWLKRGNALALMQRYEDALIAY 463

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + I     + +  RG  L  L + ++AI      + + P N E    R      +  
Sbjct: 464 NQGIAIWPDNYQVWLQRGKNLAKLERCQEAIAAFDKVIQLKPDNCEAWLKRGDVLQKLQR 523

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
           +++AI  Y  AL+++ D  E  V
Sbjct: 524 FQDAISSYGVALEIQPDYYEALV 546



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 127/291 (43%), Gaps = 7/291 (2%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y   +   D+ +   P   +A + RG+A     + + A+  F +A Q  P   EAW  R
Sbjct: 79  RYDVVVVCCDRAIGIKPESYKAWVLRGSALLSLHQYQEALVSFEQATQIQPQNYEAWHYR 138

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G+A   L +   A     KA+E +PN   I + +G        +  AV      VKL   
Sbjct: 139 GRALEELHQYQTAAACYRKAIEIKPNLPTIWYRQGCTLLHGDRYAEAVAAFERVVKLQPG 198

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           N  A+ Y GLAL     Y ++  ++ +A+QL     +AW +     + L    +A+    
Sbjct: 199 NAEAWFYRGLALMKALRYAESVSSYDRAVQLQPENYQAWFNRGIALEKLHRYAEAVNSYD 258

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           +V+ +    S+A+  +G+ L  L +   AI  L+  + I+P+  E            G +
Sbjct: 259 RVIQLQPGDSEAWFYKGMALKHL-RPDAAIATLNQAIKINPNFPELWIGFGQVLSEAGHW 317

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALYT-ASKINSEF 680
             AI  +D A  L  +  E ++ + LA      Y++ I  Y+ A ++  +F
Sbjct: 318 EGAIASFDKATQLNPNFPEAWLGRGLALAGMEHYREAIIAYSNALQLKGDF 368



 Score = 73.2 bits (178), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 6/263 (2%)

Query: 369 CVTRISKSKSISVDF-RLSRGIAQV--NEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +  ++++  I+ +F  L  G  QV    G +  AI+ FD+  + +P +PEA +GRG A 
Sbjct: 286 AIATLNQAIKINPNFPELWIGFGQVLSEAGHWEGAIASFDKATQLNPNFPEAWLGRGLAL 345

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPN---S 482
           A       AI  ++ A+Q      EAW  RG+A   L    EAI    K +        S
Sbjct: 346 AGMEHYREAIIAYSNALQLKGDFLEAWNYRGEALEKLHRYEEAIACFDKVIAMTSELDIS 405

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           + +  +RG    K + +  A+      + L  +N  A+   G AL+ +  Y+ A  A+ +
Sbjct: 406 SKVGFQRGAALEKLERYAEAIAAYDQVLLLQPDNFEAWLKRGNALALMQRYEDALIAYNQ 465

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
            I +  +  + W    +    L   ++A+    +V+ +     +A+  RG +L  L + +
Sbjct: 466 GIAIWPDNYQVWLQRGKNLAKLERCQEAIAAFDKVIQLKPDNCEAWLKRGDVLQKLQRFQ 525

Query: 603 KAIKDLSSGLGIDPSNIECLYLR 625
            AI      L I P   E L  R
Sbjct: 526 DAISSYGVALEIQPDYYEALVSR 548



 Score = 57.8 bits (138), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 9/217 (4%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G     LG    A+    KA+E +P+      +   V  K   ++  V      + +  
Sbjct: 36  QGNRLYGLGRYEAAVHHYEKAVEVKPDWCQAWLQLATVLRKLHRYDVVVVCCDRAIGIKP 95

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           E+  A+   G AL S+ +Y++A  +  +A Q+     EAW +  +  ++L   + A  C 
Sbjct: 96  ESYKAWVLRGSALLSLHQYQEALVSFEQATQIQPQNYEAWHYRGRALEELHQYQTAAACY 155

Query: 575 QQVLYIDKRFSKAYHLRG-LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
           ++ + I       ++ +G  LLHG  ++ +A+      + + P N E  + R        
Sbjct: 156 RKAIEIKPNLPTIWYRQGCTLLHG-DRYAEAVAAFERVVKLQPGNAEAWFYRGLALMKAL 214

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
            Y E++  YD A+ L+ ++ +       A++ + IAL
Sbjct: 215 RYAESVSSYDRAVQLQPENYQ-------AWFNRGIAL 244



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 62/167 (37%), Gaps = 40/167 (23%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           V  ++    IS      RG A     +YA AI+ +DQ+L   P   EA + RG A A  +
Sbjct: 395 VIAMTSELDISSKVGFQRGAALEKLERYAEAIAAYDQVLLLQPDNFEAWLKRGNALALMQ 454

Query: 430 ELE----------------------------------AAISDFTEAIQSNPSAGEAWKRR 455
             E                                   AI+ F + IQ  P   EAW +R
Sbjct: 455 RYEDALIAYNQGIAIWPDNYQVWLQRGKNLAKLERCQEAIAAFDKVIQLKPDNCEAWLKR 514

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHER------GIVNFKF 496
           G     L    +AI     ALE +P+  + L  R      G+++ KF
Sbjct: 515 GDVLQKLQRFQDAISSYGVALEIQPDYYEALVSREELRVKGVISGKF 561


>gi|306841308|ref|ZP_07474017.1| TPR domain-containing protein [Brucella sp. BO2]
 gi|306288611|gb|EFM59947.1| TPR domain-containing protein [Brucella sp. BO2]
          Length = 283

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 54  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G                              
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------------ 143

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                 Y+     ++AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 144 ----NVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 199

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 200 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 248



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 89/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 74  RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+          H RG++         A+ED 
Sbjct: 134 QYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 193

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 194 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 253

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 254 KAKAANSYARAVQLDPKYKPA 274



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A++DF +AI   
Sbjct: 107 NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNDFNQAIALR 166

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      D++ A +D
Sbjct: 167 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDD 226

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ +A+QLD  +  A
Sbjct: 227 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPA 274



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 54  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ D +  + L   +  AY
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAY 173

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 174 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 233

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 234 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 269


>gi|254411807|ref|ZP_05025583.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196181529|gb|EDX76517.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 639

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 106/222 (47%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG    N+GK  SA++   Q ++ +P   +A   RG  R    + + A +D+T+ +Q +P
Sbjct: 387 RGKIYANQGKTQSALADLTQAIQLNPQNADAYYQRGNLRLELGDRQGAKADYTQVLQRDP 446

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +   AW  RGQ +A LG    AI D ++A++ +PN      +R        +   A++D 
Sbjct: 447 NFTPAWVNRGQIQADLGHEQAAINDYTQAIQLKPNLVTAYLKRCRSRSNLGNQKGAIDDC 506

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  + L      AY   GLA    G+ + A   +  AIQL+    +A+ +     Q++ +
Sbjct: 507 TTAINLRPNQALAYQNRGLARQRRGDSRGAITDYTVAIQLNPEAADAYYNRGVARQEIED 566

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           +  A+    Q +  +  ++ AY+ RGL    LG    AI DL
Sbjct: 567 TLGAIADYTQAIERNPDYALAYYERGLAQAQLGNRLAAINDL 608



 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 7/238 (2%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           EAAI  +++AI   P    A+  RG+  A  G++  A+ DL++A++  P +AD  ++RG 
Sbjct: 364 EAAIDYYSQAITYQPQNATAYYYRGKIYANQGKTQSALADLTQAIQLNPQNADAYYQRGN 423

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
           +  +  D   A  D +  ++ D     A+   G   + +G  + A   + +AIQL  N +
Sbjct: 424 LRLELGDRQGAKADYTQVLQRDPNFTPAWVNRGQIQADLGHEQAAINDYTQAIQLKPNLV 483

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A+    +   +L N + A++     + +    + AY  RGL     G  + AI D +  
Sbjct: 484 TAYLKRCRSRSNLGNQKGAIDDCTTAINLRPNQALAYQNRGLARQRRGDSRGAITDYTVA 543

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIA 669
           + ++P   +  Y R      I +   AI DY  A++   D         LA+Y++ +A
Sbjct: 544 IQLNPEAADAYYNRGVARQEIEDTLGAIADYTQAIERNPDY-------ALAYYERGLA 594



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 98/207 (47%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           + D    RG  ++  G    A + + Q+L+ DP +  A + RG  +A     +AAI+D+T
Sbjct: 414 NADAYYQRGNLRLELGDRQGAKADYTQVLQRDPNFTPAWVNRGQIQADLGHEQAAINDYT 473

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AIQ  P+   A+ +R ++R+ LG    AI D + A+   PN A     RG+   +  D 
Sbjct: 474 QAIQLKPNLVTAYLKRCRSRSNLGNQKGAIDDCTTAINLRPNQALAYQNRGLARQRRGDS 533

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ D +  ++L+ E   AY   G+A   I +   A   + +AI+ + ++  A+     
Sbjct: 534 RGAITDYTVAIQLNPEAADAYYNRGVARQEIEDTLGAIADYTQAIERNPDYALAYYERGL 593

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSK 586
               L N   A+  LQQ   + +   K
Sbjct: 594 AQAQLGNRLAAINDLQQAAQLCRNLGK 620


>gi|265985184|ref|ZP_06097919.1| TPR repeat-containing protein [Brucella sp. 83/13]
 gi|264663776|gb|EEZ34037.1| TPR repeat-containing protein [Brucella sp. 83/13]
          Length = 295

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G                              
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------------ 155

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                 Y+     ++AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 156 ----NVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 211

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G++  A  D++ A+ L+ +  E +  Q L +
Sbjct: 212 NSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQNVAESWANQALVY 260



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 89/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 86  RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ + ++A+          H RG++         A+ED 
Sbjct: 146 QYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 205

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G++  A +    AI LD+N  E+W +    Y+   +
Sbjct: 206 SKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 265

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 266 KAKAANSYARAVQLDPKYKPA 286



 Score = 74.7 bits (182), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A+++F +AI   
Sbjct: 119 NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNNFNQAIALR 178

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      DF+ A +D
Sbjct: 179 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNAFDD 238

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ +A+QLD  +  A
Sbjct: 239 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPA 286



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ + +  + L   +  AY
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAY 185

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 186 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITL 245

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 246 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 281


>gi|443479224|ref|ZP_21068848.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
 gi|443015299|gb|ELS30319.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
           biceps PCC 7429]
          Length = 433

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 115/253 (45%), Gaps = 23/253 (9%)

Query: 414 YPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
           + E    +G A+A   +   AI  F+ AI  NP   EA+ +RG     LG+   AI D S
Sbjct: 7   FHEDFFQQGLAKAKSGDRYGAIQAFSLAIDVNPQWAEAYYQRGLILFDLGDRQGAIADYS 66

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL------ 527
           +A+   P+  D+   R +      D   A  D++  ++++ ++  A+  LGL        
Sbjct: 67  QAIMLAPDVIDVYVARSMTRIAIADILGAQTDIAQALEINPKSAIAHQLLGLTYKQQQQW 126

Query: 528 -SSIGEYKKAEEAHLKAIQLD--RNFLEAWGHL-TQFYQDLAN-------------SEKA 570
             +I  YK+A    L+    D  R  +E++  L T     +AN               +A
Sbjct: 127 EKAIATYKQAAHLFLELRDEDNCRRCIESYKSLETMLPPSVANILADIQPKIDQGEHTQA 186

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
           L  L  VL I+ +  KA  LRGL+L  LG  + AI+DL+    ++P NIE    R     
Sbjct: 187 LIALNWVLQIEPQNIKALCLRGLVLGKLGDTQLAIQDLNQATFLEPQNIEVRLGRGRIRL 246

Query: 631 AIGEYREAIKDYD 643
            IG+ R AI D++
Sbjct: 247 EIGDARGAIADFN 259



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 2/168 (1%)

Query: 391 QVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           ++++G++  A+   + +L+ +P   +AL  RG       + + AI D  +A    P   E
Sbjct: 177 KIDQGEHTQALIALNWVLQIEPQNIKALCLRGLVLGKLGDTQLAIQDLNQATFLEPQNIE 236

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
               RG+ R  +G++  AI D ++ +   P+  D+  +R     K KD+ AA+ED S  +
Sbjct: 237 VRLGRGRIRLEIGDARGAIADFNELIREYPSIVDVYSDRAKAYTKLKDYRAAIEDFSRSL 296

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA--IQLDRNFLEAWGH 556
            L+  N   Y     A    G+ K A E + +A  I   R+ +E + +
Sbjct: 297 SLNHNNPQLYCDRADARYDFGDLKGAIEDYQQAANIWFTRSLMERYRY 344



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 54/119 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+     G    AI   +Q    +P   E  +GRG  R    +   AI+DF E I+  P
Sbjct: 207 RGLVLGKLGDTQLAIQDLNQATFLEPQNIEVRLGRGRIRLEIGDARGAIADFNELIREYP 266

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           S  + +  R +A   L +   AI+D S++L    N+  +  +R    + F D   A+ED
Sbjct: 267 SIVDVYSDRAKAYTKLKDYRAAIEDFSRSLSLNHNNPQLYCDRADARYDFGDLKGAIED 325



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/349 (19%), Positives = 134/349 (38%), Gaps = 64/349 (18%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF   +G+A+   G    AI  F   +  +P + EA   RG       + + AI+D+++A
Sbjct: 10  DF-FQQGLAKAKSGDRYGAIQAFSLAIDVNPQWAEAYYQRGLILFDLGDRQGAIADYSQA 68

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH-------------E 488
           I   P   + +  R   R A+ + + A  D+++ALE  P SA I H             E
Sbjct: 69  IMLAPDVIDVYVARSMTRIAIADILGAQTDIAQALEINPKSA-IAHQLLGLTYKQQQQWE 127

Query: 489 RGIVNFK------------------------------------FKDFNAAVED------- 505
           + I  +K                                      D    ++        
Sbjct: 128 KAIATYKQAAHLFLELRDEDNCRRCIESYKSLETMLPPSVANILADIQPKIDQGEHTQAL 187

Query: 506 --LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
             L+  ++++ +N  A    GL L  +G+ + A +   +A  L+   +E      +   +
Sbjct: 188 IALNWVLQIEPQNIKALCLRGLVLGKLGDTQLAIQDLNQATFLEPQNIEVRLGRGRIRLE 247

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + ++  A+    +++         Y  R      L  ++ AI+D S  L ++ +N +   
Sbjct: 248 IGDARGAIADFNELIREYPSIVDVYSDRAKAYTKLKDYRAAIEDFSRSLSLNHNNPQLYC 307

Query: 624 LRASCYHAIGEYREAIKDYDAALDL----ELDSMEKFVLQCLAFYQKEI 668
            RA   +  G+ + AI+DY  A ++     L    ++ L  ++ +Q E+
Sbjct: 308 DRADARYDFGDLKGAIEDYQQAANIWFTRSLMERYRYALARISLWQSEL 356



 Score = 41.2 bits (95), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 49/96 (51%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +++ RL RG  ++  G    AI+ F+++++E P   +    R  A    ++  AAI DF+
Sbjct: 234 NIEVRLGRGRIRLEIGDARGAIADFNELIREYPSIVDVYSDRAKAYTKLKDYRAAIEDFS 293

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
            ++  N +  + +  R  AR   G+   AI+D  +A
Sbjct: 294 RSLSLNHNNPQLYCDRADARYDFGDLKGAIEDYQQA 329


>gi|359462560|ref|ZP_09251123.1| hypothetical protein ACCM5_27771 [Acaryochloris sp. CCMEE 5410]
          Length = 265

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 1/194 (0%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           + L+  G  +A +   + AIS + +AIQ NP    A+  RG A   LG+   AI D ++A
Sbjct: 43  QTLLQSGREKAKRGNYQEAISIYNQAIQLNPRNTSAYIDRGLAYHDLGDYQGAIADFNRA 102

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI-GEYK 534
           LE EP+ A  L+ RG       DF+ A+ DL+  ++L      AY    + L ++ G+++
Sbjct: 103 LEIEPDHAIALYNRGEARSDIGDFDGAIVDLTQAIRLKPNYAEAYNIRAIILGAVQGQWQ 162

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           KA +   +AI    +F +A+ +  + Y  + ++  A+    + + ++ + ++AY  RGLL
Sbjct: 163 KALKDLNQAILFRPDFADAYYNRGRTYAAMRDNTNAIANYTKAIELNAKLAEAYGNRGLL 222

Query: 595 LHGLGQHKKAIKDL 608
               G  + AI DL
Sbjct: 223 KAQTGDKQGAIVDL 236



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 1/173 (0%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L  G  +   G Y  AISI++Q ++ +P    A I RG A     + + AI+DF  A++ 
Sbjct: 46  LQSGREKAKRGNYQEAISIYNQAIQLNPRNTSAYIDRGLAYHDLGDYQGAIADFNRALEI 105

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAV 503
            P    A   RG+AR+ +G+   AI DL++A+  +PN A+  + R I+    +  +  A+
Sbjct: 106 EPDHAIALYNRGEARSDIGDFDGAIVDLTQAIRLKPNYAEAYNIRAIILGAVQGQWQKAL 165

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           +DL+  +    +   AY   G   +++ +   A   + KAI+L+    EA+G+
Sbjct: 166 KDLNQAILFRPDFADAYYNRGRTYAAMRDNTNAIANYTKAIELNAKLAEAYGN 218



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 84/163 (51%), Gaps = 1/163 (0%)

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           K  ++  A+   +  ++L+  N SAY   GLA   +G+Y+ A     +A++++ +   A 
Sbjct: 54  KRGNYQEAISIYNQAIQLNPRNTSAYIDRGLAYHDLGDYQGAIADFNRALEIEPDHAIAL 113

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL-GQHKKAIKDLSSGLG 613
            +  +   D+ + + A+  L Q + +   +++AY++R ++L  + GQ +KA+KDL+  + 
Sbjct: 114 YNRGEARSDIGDFDGAIVDLTQAIRLKPNYAEAYNIRAIILGAVQGQWQKALKDLNQAIL 173

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
             P   +  Y R   Y A+ +   AI +Y  A++L     E +
Sbjct: 174 FRPDFADAYYNRGRTYAAMRDNTNAIANYTKAIELNAKLAEAY 216



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 35/173 (20%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG+A  + G Y  AI+ F++ L+ +P +  AL  RG AR+   + + AI D T+AI+ 
Sbjct: 80  IDRGLAYHDLGDYQGAIADFNRALEIEPDHAIALYNRGEARSDIGDFDGAIVDLTQAIRL 139

Query: 445 NPSAGEA--------------WKR---------------------RGQARAALGESVEAI 469
            P+  EA              W++                     RG+  AA+ ++  AI
Sbjct: 140 KPNYAEAYNIRAIILGAVQGQWQKALKDLNQAILFRPDFADAYYNRGRTYAAMRDNTNAI 199

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
            + +KA+E     A+    RG++  +  D   A+ DL     L KE  +   Y
Sbjct: 200 ANYTKAIELNAKLAEAYGNRGLLKAQTGDKQGAIVDLRYAANLFKEQGNQGNY 252



 Score = 50.4 bits (119), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 50/97 (51%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N ++A+    Q + ++ R + AY  RGL  H LG ++ AI D +  L I+P +   LY 
Sbjct: 56  GNYQEAISIYNQAIQLNPRNTSAYIDRGLAYHDLGDYQGAIADFNRALEIEPDHAIALYN 115

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
           R      IG++  AI D   A+ L+ +  E + ++ +
Sbjct: 116 RGEARSDIGDFDGAIVDLTQAIRLKPNYAEAYNIRAI 152


>gi|306846174|ref|ZP_07478736.1| TPR domain-containing protein [Brucella inopinata BO1]
 gi|306273425|gb|EFM55286.1| TPR domain-containing protein [Brucella inopinata BO1]
          Length = 283

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 54  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G                              
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------------ 143

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                 Y+     ++AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 144 ----NVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 199

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 200 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 248



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/201 (25%), Positives = 89/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 74  RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+          H RG++         A+ED 
Sbjct: 134 QYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 193

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 194 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 253

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 254 KAKAANSYARAVQLDPKYKPA 274



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A++DF +AI   
Sbjct: 107 NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNDFNQAIALR 166

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      D++ A +D
Sbjct: 167 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDD 226

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ +A+QLD  +  A
Sbjct: 227 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPA 274



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 54  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ D +  + L   +  AY
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNDFNQAIALRTTDGRAY 173

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 174 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 233

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 234 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 269


>gi|423218040|ref|ZP_17204536.1| hypothetical protein HMPREF1061_01309 [Bacteroides caccae
           CL03T12C61]
 gi|392627543|gb|EIY21578.1| hypothetical protein HMPREF1061_01309 [Bacteroides caccae
           CL03T12C61]
          Length = 668

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 29  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 88

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD+++A EDL + +K+    
Sbjct: 89  LARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDSAKEDLESLLKVSPRY 148

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            + +A+  LQQ
Sbjct: 149 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------AARAIVKLQQ 196

Query: 577 VLY--IDKRFSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y   +  F +A HL          R L        + A+ D    L IDP+N    Y 
Sbjct: 197 SKYGEAESDFDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 256

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 257 RGLLRARVGDDNRAIEDFDFVIKMEPDNM 285



 Score = 70.1 bits (170), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KY  A S FD+ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 188 ARAIVKLQQSKYGEAESDFDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 247

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 248 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAIFNRGLLRAQTGDYRGAIQD 307

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            S  +       + Y     A   IG+ K AE+   K +  QLD+
Sbjct: 308 YSTVINQHPNFLAGYYQRAEARKKIGDRKGAEQDEFKLLKAQLDK 352



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A SDF  AI  
Sbjct: 153 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQSKYGEAESDFDRAIHL 212

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 213 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIE 272

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 273 DFDFVIKMEPDNMMAIFNRGLLRAQTGDYRGAIQDYSTVINQHPNFLAGY 322



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 119/283 (42%), Gaps = 8/283 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D++  I  +
Sbjct: 256 NRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAIFNRGLLRAQTGDYRGAIQDYSTVINQH 315

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    + +R +AR  +G+   A QD  K L+ + +  + +  + +   +  D ++  +D
Sbjct: 316 PNFLAGYYQRAEARKKIGDRKGAEQDEFKLLKAQLDKQNGVTNKDVAQNQNPDQDSEGDD 375

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-LEAWGHLTQFYQDL 564
                K   +N + Y  + +A  S  E +   +   +    + N  LE    LT +Y+ +
Sbjct: 376 KDRTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNITLEPMFALT-YYEKM 434

Query: 565 A------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           +      N  K +E L +   + KR         L    +  H   I   +S +  D  N
Sbjct: 435 SDVKRSVNFHKYVEELNRSGVLPKRLRITNMEAPLTEEQVKFHFALIDTHTSAIVDDEKN 494

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
               + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 495 ASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 537



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 221 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKM 280

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD S  +   PN     ++R     K  D   A +
Sbjct: 281 EPDNMMAIFNRGLLRAQTGDYRGAIQDYSTVINQHPNFLAGYYQRAEARKKIGDRKGAEQ 340

Query: 505 DLSACVK--LDKEN 516
           D    +K  LDK+N
Sbjct: 341 DEFKLLKAQLDKQN 354



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  +AI+D+ +AI+ NP   +A+  RG     LG
Sbjct: 577 LDKVINLAPDFVYAYYNRANVSAMLKDYRSAIADYNKAIELNPDFADAYFNRGLTHIFLG 636

Query: 464 ESVEAIQDLSKALEF 478
            +   I DLSKA E 
Sbjct: 637 NNKLGISDLSKAGEL 651



 Score = 39.7 bits (91), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 27/153 (17%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH-------- 540
           R I  +  +DF++AV DL+  + LD +   AY    L      EY+KAE+          
Sbjct: 501 RAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRALIRCKQLEYQKAEQTADTDVPGDN 560

Query: 541 -----------------LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
                             K I L  +F+ A+ +       L +   A+    + + ++  
Sbjct: 561 ARKEITAVDYEVVRKDLDKVINLAPDFVYAYYNRANVSAMLKDYRSAIADYNKAIELNPD 620

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           F+ AY  RGL    LG +K  I DLS    LGI
Sbjct: 621 FADAYFNRGLTHIFLGNNKLGISDLSKAGELGI 653


>gi|333987314|ref|YP_004519921.1| hypothetical protein MSWAN_1100 [Methanobacterium sp. SWAN-1]
 gi|333825458|gb|AEG18120.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 197

 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 87/164 (53%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI     GKY  AI  FD++LK DP    AL  +G       + + A+  F + ++ +
Sbjct: 16  NKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKVLELD 75

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EAW  +G A   +G+  EAI+   K+LE +PN+++  + +GI   K + +  A++ 
Sbjct: 76  PKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEALKS 135

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            +  +K       A+   GLAL+ + +Y++A E   K ++LD N
Sbjct: 136 FNKALKSYPNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPN 179



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 74/133 (55%)

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
           + N  A+   G+ L   G+YK+A E   K +++D   + A  +    Y  L  +++AL+ 
Sbjct: 8   RNNVKAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDY 67

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             +VL +D + ++A++ +GL    +G++++AIK     L +DP+N E  Y +      + 
Sbjct: 68  FDKVLELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLE 127

Query: 634 EYREAIKDYDAAL 646
           +Y+EA+K ++ AL
Sbjct: 128 KYQEALKSFNKAL 140



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 85/168 (50%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
           +AW  +G      G+  EAI+   K L+ +P +   L  +G+          A++     
Sbjct: 12  KAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKV 71

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           ++LD +N  A+   GLA   IG+Y++A +++ K+++LD N  E W +     + L   ++
Sbjct: 72  LELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQE 131

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
           AL+   + L     +  A++ +GL L  L ++++A++     L +DP+
Sbjct: 132 ALKSFNKALKSYPNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPN 179



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 76/151 (50%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C  ++ K    +V    ++G+     GK   A+  FD++L+ DP   EA   +G A    
Sbjct: 33  CFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKVLELDPKNAEAWNNKGLAFEDI 92

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            + + AI  + ++++ +P+  E W  +G +   L +  EA++  +KAL+  PN  D  + 
Sbjct: 93  GKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEALKSFNKALKSYPNYVDAWNN 152

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
           +G+   + K +  A+E     +KLD  +++A
Sbjct: 153 KGLALAQLKKYQEALECFDKVLKLDPNSETA 183



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 58/107 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+A  + GKY  AI  +D+ L+ DP   E    +G +     + + A+  F +A++S 
Sbjct: 84  NKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEKYQEALKSFNKALKSY 143

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           P+  +AW  +G A A L +  EA++   K L+ +PNS   L  + I+
Sbjct: 144 PNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPNSETALKAKKII 190



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 87/172 (50%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N+    + +GI   K   +  A+E     +K+D +N  A    G+    +G+ ++A +  
Sbjct: 9   NNVKAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYF 68

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            K ++LD    EAW +    ++D+   ++A++   + L +D   S+ ++ +G+ L  L +
Sbjct: 69  DKVLELDPKNAEAWNNKGLAFEDIGKYQEAIKSYDKSLELDPNNSETWYNKGISLKKLEK 128

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           +++A+K  +  L   P+ ++    +      + +Y+EA++ +D  L L+ +S
Sbjct: 129 YQEALKSFNKALKSYPNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPNS 180


>gi|386813638|ref|ZP_10100862.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403135|dbj|GAB63743.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 405

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 141/310 (45%), Gaps = 8/310 (2%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           V E K   A+  + ++++ DP   EA  GRG        LE A +DF +AI    +  +A
Sbjct: 37  VKEKKLDEALVEYTKVIEADPNLAEAYYGRGKVYFELERLEDAAADFRKAIDVKSNYIDA 96

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
            K+  +    +G   +  Q   KA++ +P++A    + G+   K +    A+E     ++
Sbjct: 97  HKKLAETFMKIGAPDDEFQKRFKAIQNDPDNAMGYVDLGVFYHKLEKDIDAIEQYKQALE 156

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           LD  N      LG+    +G Y+ AE    +AI+++     A  +L          ++ +
Sbjct: 157 LDPNNSFILYNLGVGYLDMGLYEDAETIFKQAIEINPTHDNAHYNLAVALHKRGKIDECI 216

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           + L + L ++ ++S +Y + GL+     +  +AI   +  + IDP N+E  Y RA  + A
Sbjct: 217 KELNKTLEVNPKYSNSYVIFGLIKLREKKFDEAIAQYNKAMEIDPDNLEARYQRAIVF-A 275

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD-IDGDID 690
           + E       YD AL   +  +EK      A Y   +  +   +++    W+D +   ID
Sbjct: 276 LQE------RYDDALAENMKILEKNPKHASAAYNIGVIYHRTDRLDKAMEWYDKVAKKID 329

Query: 691 PLFKEYWCKR 700
           PL+++ +  R
Sbjct: 330 PLYEDAYYTR 339



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 1/209 (0%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           AI  + Q L+ DP     L   G         E A + F +AI+ NP+   A      A 
Sbjct: 147 AIEQYKQALELDPNNSFILYNLGVGYLDMGLYEDAETIFKQAIEINPTHDNAHYNLAVAL 206

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
              G+  E I++L+K LE  P  ++     G++  + K F+ A+   +  +++D +N  A
Sbjct: 207 HKRGKIDECIKELNKTLEVNPKYSNSYVIFGLIKLREKKFDEAIAQYNKAMEIDPDNLEA 266

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLY 579
                +  +    Y  A   ++K ++ +     A  ++   Y      +KA+E   +V  
Sbjct: 267 RYQRAIVFALQERYDDALAENMKILEKNPKHASAAYNIGVIYHRTDRLDKAMEWYDKVAK 326

Query: 580 -IDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
            ID  +  AY+ RG L    G H KA  D
Sbjct: 327 KIDPLYEDAYYTRGQLYSMKGDHSKAYSD 355


>gi|262407689|ref|ZP_06084237.1| tetratricopeptide repeat family protein [Bacteroides sp. 2_1_22]
 gi|345511838|ref|ZP_08791377.1| tetratricopeptide repeat protein [Bacteroides sp. D1]
 gi|423213192|ref|ZP_17199721.1| hypothetical protein HMPREF1074_01253 [Bacteroides xylanisolvens
           CL03T12C04]
 gi|229443724|gb|EEO49515.1| tetratricopeptide repeat protein [Bacteroides sp. D1]
 gi|262354497|gb|EEZ03589.1| tetratricopeptide repeat family protein [Bacteroides sp. 2_1_22]
 gi|392694109|gb|EIY87338.1| hypothetical protein HMPREF1074_01253 [Bacteroides xylanisolvens
           CL03T12C04]
          Length = 676

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAETDCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD++AA EDL + +K+    
Sbjct: 98  LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            S +A+  LQQ
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------SARAIVKLQQ 205

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F++A  L          R L        + A+ D    L IDP+N    Y 
Sbjct: 206 AKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 265

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 266 RGLLRARVGDDNRAIEDFDFVIKMEPDNM 294



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A + F++ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K AE+   K +  Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 361



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A +DF  AI  
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWSARAIVKLQQAKYAEAEADFNRAIPL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 282 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 116/286 (40%), Gaps = 16/286 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D+T  I   
Sbjct: 265 NRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN---FKFKDFNAA 502
           P+    + +R +AR  +G+   A QD     EF+   A I  + G+ N    + KD    
Sbjct: 325 PNFLAGYYQRSEARRKIGDKKGAEQD-----EFKVMKAQIDKQNGVTNKDVAQNKDKENE 379

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-LEAWGHLTQFY 561
            E      K   +N + Y  + +A  S  E +   +   +    + N  LE    LT +Y
Sbjct: 380 EEGGEKTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNIKLEPMFALT-YY 438

Query: 562 QDLA------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           + ++      N  K +E L +   + KR         L    +  H   I   +S +  D
Sbjct: 439 EKMSDVKRSVNFHKYIEGLNRTGILPKRLRITNMEAPLTEEQVKVHFALIDTHTSAIVED 498

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             N    + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 499 DKNASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 544



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AI+ NP   +A+  RG     LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIVDYDKAIELNPDFADAYFNRGLTHIFLG 644

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            +   I DLSKA E    SA
Sbjct: 645 NNKLGISDLSKAGELGIVSA 664



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D   A +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 350 DEFKVMKAQIDKQN 363



 Score = 40.0 bits (92), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 28/154 (18%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
           R I  +  +DF++AV DL+  + LD +   AY    L      EY+KAE+A         
Sbjct: 508 RAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRALIRCKQLEYQKAEQAVETDVVPGD 567

Query: 542 -------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
                              K I L  +F+ A+ +       L +   A+    + + ++ 
Sbjct: 568 NKRKEITAVDYEVVRKDLDKVINLAPDFVYAYYNRANVSAMLKDYRAAIVDYDKAIELNP 627

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
            F+ AY  RGL    LG +K  I DLS    LGI
Sbjct: 628 DFADAYFNRGLTHIFLGNNKLGISDLSKAGELGI 661


>gi|421838039|ref|ZP_16272037.1| hypothetical protein CFSAN001627_20655, partial [Clostridium
           botulinum CFSAN001627]
 gi|409739661|gb|EKN40275.1| hypothetical protein CFSAN001627_20655, partial [Clostridium
           botulinum CFSAN001627]
          Length = 219

 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 95/220 (43%), Gaps = 34/220 (15%)

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +  +++  I  +T +I+  PS  +A+  R +    LGE  ++I D +K LE  P   D  
Sbjct: 34  YSSDIKDKIKFYTISIKLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCY 93

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + R IV +  K+++ +++DL   V +DK  K+ Y   G+    I +YK+A     KAI  
Sbjct: 94  NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHE 153

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           D                                   R S+AY  R    + L ++  +IK
Sbjct: 154 DS----------------------------------RDSEAYENRAFTYYNLKKYSSSIK 179

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           D ++ L + P N      R + Y+ I  Y  AI DY  AL
Sbjct: 180 DYTNALKLTPENKNIYLNRGTIYYKIKNYENAISDYMKAL 219



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 62/119 (52%)

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +GEY K+   + K ++L+    + + +    Y  + N +K+L+ L  ++ +DK +   Y 
Sbjct: 69  LGEYNKSIADYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYF 128

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            RG++  G+  +K+A  + +  +  D  + E    RA  Y+ + +Y  +IKDY  AL L
Sbjct: 129 NRGMVFLGIEDYKRAAIEFTKAIHEDSRDSEAYENRAFTYYNLKKYSSSIKDYTNALKL 187



 Score = 46.2 bits (108), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 1/186 (0%)

Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           S++ K   KF    I K K   +D   +R       G+Y  +I+ +++IL+ +P   +  
Sbjct: 35  SSDIKDKIKFYTISI-KLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCY 93

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
             R       +  + ++ D    +  +      +  RG     + +   A  + +KA+  
Sbjct: 94  NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHE 153

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
           +   ++    R    +  K ++++++D +  +KL  ENK+ Y   G     I  Y+ A  
Sbjct: 154 DSRDSEAYENRAFTYYNLKKYSSSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYENAIS 213

Query: 539 AHLKAI 544
            ++KA+
Sbjct: 214 DYMKAL 219



 Score = 42.4 bits (98), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/178 (17%), Positives = 71/178 (39%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I  +   +K  P + +A   R        E   +I+D+ + ++ NP   + +  R     
Sbjct: 42  IKFYTISIKLKPSFIDAYFNRAELYKELGEYNKSIADYNKILELNPKDKDCYNNRAIVYY 101

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +    +++QDL   +  + +  +I   RG+V    +D+  A  + +  +  D  +  AY
Sbjct: 102 LIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDSRDSEAY 161

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
                   ++ +Y  + + +  A++L       + +    Y  + N E A+    + L
Sbjct: 162 ENRAFTYYNLKKYSSSIKDYTNALKLTPENKNIYLNRGTIYYKIKNYENAISDYMKAL 219


>gi|428312764|ref|YP_007123741.1| O-linked N-acetylglucosamine transferase, SPINDLY family
           [Microcoleus sp. PCC 7113]
 gi|428254376|gb|AFZ20335.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Microcoleus sp. PCC 7113]
          Length = 789

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 2/238 (0%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           +RL  G A  ++G+ A AI+ +   +K  P Y EA    G A   Q  L AAI  + +AI
Sbjct: 76  YRL--GSALQSKGQLAEAIAFYQHAIKLQPDYTEAHYNLGYAFHQQGNLPAAIEHYQQAI 133

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
             NP+  EA           G+   AI    +A+  +P+  +I +  G +  +    +AA
Sbjct: 134 ALNPNQAEAHANLAHILQHQGQIEAAITHYQQAIAIKPDVPEIFYNLGNLLKQQNQLDAA 193

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +      + L+     A+  LG +L S+G+Y++A   + +A+ L+ N L+ +  L     
Sbjct: 194 MIQYQWALALNPNYIDAHLQLGTSLHSLGKYEEAIICYQQALTLEPNVLDTYLKLGWALM 253

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
            L+  EKA  C QQ L ++    + Y    L L    Q ++AI      L ++ + +E
Sbjct: 254 HLSRFEKATHCFQQALILNPEHPEVYQKLALALASQNQLEEAITSFQKALHLNSNFVE 311



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 112/279 (40%), Gaps = 16/279 (5%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L R   QV  GK   AI+ + +++   P Y EA    G+A   + +L  AI+ +  AI+ 
Sbjct: 44  LGRMAHQV--GKLEEAIAYYQKLIALLPDYAEAYYRLGSALQSKGQLAEAIAFYQHAIKL 101

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD-------ILHERGIVNFKFK 497
            P   EA    G A    G    AI+   +A+   PN A+       IL  +G       
Sbjct: 102 QPDYTEAHYNLGYAFHQQGNLPAAIEHYQQAIALNPNQAEAHANLAHILQHQG------- 154

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
              AA+      + +  +    +  LG  L    +   A   +  A+ L+ N+++A   L
Sbjct: 155 QIEAAITHYQQAIAIKPDVPEIFYNLGNLLKQQNQLDAAMIQYQWALALNPNYIDAHLQL 214

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
                 L   E+A+ C QQ L ++      Y   G  L  L + +KA       L ++P 
Sbjct: 215 GTSLHSLGKYEEAIICYQQALTLEPNVLDTYLKLGWALMHLSRFEKATHCFQQALILNPE 274

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           + E     A    +  +  EAI  +  AL L  + +E +
Sbjct: 275 HPEVYQKLALALASQNQLEEAITSFQKALHLNSNFVEAY 313



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 5/233 (2%)

Query: 395 GKYASAISIFDQILKEDPMYPEAL--IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
           G  + A  I  QIL++ P   EAL  +GR   +    +LE AI+ + + I   P   EA+
Sbjct: 18  GNLSHAEWICQQILQQQPNSTEALDLLGRMAHQV--GKLEEAIAYYQKLIALLPDYAEAY 75

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
            R G A  + G+  EAI     A++ +P+  +  +  G    +  +  AA+E     + L
Sbjct: 76  YRLGSALQSKGQLAEAIAFYQHAIKLQPDYTEAHYNLGYAFHQQGNLPAAIEHYQQAIAL 135

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           +     A+  L   L   G+ + A   + +AI +  +  E + +L    +     + A+ 
Sbjct: 136 NPNQAEAHANLAHILQHQGQIEAAITHYQQAIAIKPDVPEIFYNLGNLLKQQNQLDAAMI 195

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             Q  L ++  +  A+   G  LH LG++++AI      L ++P N+   YL+
Sbjct: 196 QYQWALALNPNYIDAHLQLGTSLHSLGKYEEAIICYQQALTLEP-NVLDTYLK 247



 Score = 42.7 bits (99), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 44/104 (42%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           +D  L  G +  + GKY  AI  + Q L  +P   +  +  G A       E A   F +
Sbjct: 208 IDAHLQLGTSLHSLGKYEEAIICYQQALTLEPNVLDTYLKLGWALMHLSRFEKATHCFQQ 267

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
           A+  NP   E +++   A A+  +  EAI    KAL    N  +
Sbjct: 268 ALILNPEHPEVYQKLALALASQNQLEEAITSFQKALHLNSNFVE 311


>gi|168184962|ref|ZP_02619626.1| tetratricopeptide repeat family protein [Clostridium botulinum Bf]
 gi|237795416|ref|YP_002862968.1| hypothetical protein CLJ_B2188 [Clostridium botulinum Ba4 str. 657]
 gi|182671993|gb|EDT83954.1| tetratricopeptide repeat family protein [Clostridium botulinum Bf]
 gi|229261369|gb|ACQ52402.1| tetratricopeptide repeat family protein [Clostridium botulinum Ba4
           str. 657]
          Length = 251

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 34/221 (15%)

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           +   ++  I  +T +I+  PS  +A+  R +    L E  ++I+D +K LE  P   D  
Sbjct: 34  YSSNIKDKIKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYNKILELNPKDKDCY 93

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + R IV +  K+++ +++DL   V +DK  K+ Y   G+    I +YK+A     KAI  
Sbjct: 94  NNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHE 153

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           D                                   R S+AY  R L  + L ++  +IK
Sbjct: 154 DS----------------------------------RDSEAYENRALAYYNLEKYSPSIK 179

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           D ++ L + P N      R S Y+ I  Y  AI DY  AL+
Sbjct: 180 DYTNALKLTPENKNIYLNRGSVYYKIKNYENAISDYMKALN 220



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 62/119 (52%)

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           + EY K+ E + K ++L+    + + +    Y  + N +K+L+ L  ++ +DK +   Y 
Sbjct: 69  LEEYNKSIEDYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYF 128

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
            RG++  G+  +K+A  + +  +  D  + E    RA  Y+ + +Y  +IKDY  AL L
Sbjct: 129 NRGMVFLGIEDYKRAAIEFTKAIHEDSRDSEAYENRALAYYNLEKYSPSIKDYTNALKL 187



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 60/135 (44%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I       Y  ++   D ++  D  Y      RG       + + A  +FT+AI  +
Sbjct: 95  NRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHED 154

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
               EA++ R  A   L +   +I+D + AL+  P + +I   RG V +K K++  A+ D
Sbjct: 155 SRDSEAYENRALAYYNLEKYSPSIKDYTNALKLTPENKNIYLNRGSVYYKIKNYENAISD 214

Query: 506 LSACVKLDKENKSAY 520
               +   +++ S Y
Sbjct: 215 YMKALNCKEKDPSFY 229



 Score = 45.8 bits (107), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/178 (18%), Positives = 72/178 (40%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I  +   +K  P + +A   R        E   +I D+ + ++ NP   + +  R     
Sbjct: 42  IKFYTISIKLKPSFIDAYFNRAELYKELEEYNKSIEDYNKILELNPKDKDCYNNRAIVYY 101

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +    +++QDL   +  + +  +I   RG+V    +D+  A  + +  +  D  +  AY
Sbjct: 102 LIKNYDKSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDSRDSEAY 161

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
               LA  ++ +Y  + + +  A++L       + +    Y  + N E A+    + L
Sbjct: 162 ENRALAYYNLEKYSPSIKDYTNALKLTPENKNIYLNRGSVYYKIKNYENAISDYMKAL 219



 Score = 43.1 bits (100), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 25/125 (20%), Positives = 64/125 (51%)

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           +I+L  +F++A+ +  + Y++L    K++E   ++L ++ +    Y+ R ++ + +  + 
Sbjct: 48  SIKLKPSFIDAYFNRAELYKELEEYNKSIEDYNKILELNPKDKDCYNNRAIVYYLIKNYD 107

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           K+++DL   + +D       + R   +  I +Y+ A  ++  A+  +    E +  + LA
Sbjct: 108 KSLQDLDVLVSMDKHYKNIYFNRGMVFLGIEDYKRAAIEFTKAIHEDSRDSEAYENRALA 167

Query: 663 FYQKE 667
           +Y  E
Sbjct: 168 YYNLE 172



 Score = 41.6 bits (96), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 26/149 (17%), Positives = 63/149 (42%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  +++IL+ +P   +    R       +  + ++ D    +  +      +  RG
Sbjct: 72  YNKSIEDYNKILELNPKDKDCYNNRAIVYYLIKNYDKSLQDLDVLVSMDKHYKNIYFNRG 131

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                + +   A  + +KA+  +   ++    R +  +  + ++ +++D +  +KL  EN
Sbjct: 132 MVFLGIEDYKRAAIEFTKAIHEDSRDSEAYENRALAYYNLEKYSPSIKDYTNALKLTPEN 191

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           K+ Y   G     I  Y+ A   ++KA+ 
Sbjct: 192 KNIYLNRGSVYYKIKNYENAISDYMKALN 220


>gi|254417473|ref|ZP_05031213.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
 gi|196175738|gb|EDX70762.1| tetratricopeptide repeat domain protein [Coleofasciculus
           chthonoplastes PCC 7420]
          Length = 355

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 118/272 (43%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGIA    G++  AI+ +D+ +K  P +  A   RG A    ++ EAA   + +A+   
Sbjct: 64  NRGIALDKAGRHEEAIASYDKAVKLQPDFYPAWYNRGNALVNLKQYEAAKLSYDQALNLK 123

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+  +AW  RG    +L   +EAI     AL+ +P+  +  + +G      K F  A+  
Sbjct: 124 PNLHQAWYNRGNVLFSLQRFLEAITSYQDALKIKPDKYEAWYNQGHAWVHLKQFQEAIAS 183

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+  +   A+   G AL  +  + +A  ++ +A++L      +W +      +L 
Sbjct: 184 YDEALKIKPDAHEAWNNRGGALYRLDRFPEAVASYNEALKLKYQQPSSWYYRGNALVNLR 243

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             + A+    + L I     +A++ RG  L  LG +  A+      +     N    Y +
Sbjct: 244 YFQDAVASYDEALKIKPDKYEAWYNRGYALLQLGDYPGALASFDKTIEFKSDNANAFYNK 303

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
           A CY   G    AI++    L+L  D   +  
Sbjct: 304 ACCYALQGNVDLAIENLQKTLNLNPDQYRELA 335



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 117/269 (43%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI  +  G++  AI+  DQ+L+ +P   +    RG A       E AI+ + +A++  P 
Sbjct: 32  GIILIQSGQFEEAIATVDQVLEREPDLYQLWYNRGIALDKAGRHEEAIASYDKAVKLQPD 91

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              AW  RG A   L +   A     +AL  +PN     + RG V F  + F  A+    
Sbjct: 92  FYPAWYNRGNALVNLKQYEAAKLSYDQALNLKPNLHQAWYNRGNVLFSLQRFLEAITSYQ 151

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +K+  +   A+   G A   + ++++A  ++ +A+++  +  EAW +       L   
Sbjct: 152 DALKIKPDKYEAWYNQGHAWVHLKQFQEAIASYDEALKIKPDAHEAWNNRGGALYRLDRF 211

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
            +A+    + L +  +   +++ RG  L  L   + A+      L I P   E  Y R  
Sbjct: 212 PEAVASYNEALKLKYQQPSSWYYRGNALVNLRYFQDAVASYDEALKIKPDKYEAWYNRGY 271

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKF 656
               +G+Y  A+  +D  ++ + D+   F
Sbjct: 272 ALLQLGDYPGALASFDKTIEFKSDNANAF 300



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 5/227 (2%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
           EAW   G      G+  EAI  + + LE EP+   + + RGI   K      A+      
Sbjct: 26  EAWYNLGIILIQSGQFEEAIATVDQVLEREPDLYQLWYNRGIALDKAGRHEEAIASYDKA 85

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           VKL  +   A+   G AL ++ +Y+ A+ ++ +A+ L  N  +AW +       L    +
Sbjct: 86  VKLQPDFYPAWYNRGNALVNLKQYEAAKLSYDQALNLKPNLHQAWYNRGNVLFSLQRFLE 145

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A+   Q  L I     +A++ +G     L Q ++AI      L I P   E    R    
Sbjct: 146 AITSYQDALKIKPDKYEAWYNQGHAWVHLKQFQEAIASYDEALKIKPDAHEAWNNRGGAL 205

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
           + +  + EA+  Y+ AL L+      +      L  L ++Q  +A Y
Sbjct: 206 YRLDRFPEAVASYNEALKLKYQQPSSWYYRGNALVNLRYFQDAVASY 252



 Score = 39.7 bits (91), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 5/177 (2%)

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           N    ++S    L+     A+  LG+ L   G++++A     + ++ + +  + W +   
Sbjct: 8   NPQAANVSYNRPLEVTTHEAWYNLGIILIQSGQFEEAIATVDQVLEREPDLYQLWYNRGI 67

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
                   E+A+    + + +   F  A++ RG  L  L Q++ A       L + P+  
Sbjct: 68  ALDKAGRHEEAIASYDKAVKLQPDFYPAWYNRGNALVNLKQYEAAKLSYDQALNLKPNLH 127

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF-----YQKEIALY 671
           +  Y R +   ++  + EAI  Y  AL ++ D  E +  Q  A+     +Q+ IA Y
Sbjct: 128 QAWYNRGNVLFSLQRFLEAITSYQDALKIKPDKYEAWYNQGHAWVHLKQFQEAIASY 184


>gi|75911170|ref|YP_325466.1| hypothetical protein Ava_4974 [Anabaena variabilis ATCC 29413]
 gi|75704895|gb|ABA24571.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
          Length = 422

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 133/318 (41%), Gaps = 44/318 (13%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++G+ +  +  YA AI  F + LK  P + EA + RG A      +  A+SD+TE I+ N
Sbjct: 7   NQGLEKAKQRDYAGAIEEFSRALKLTPYFAEAYLQRGLAYYDSGAILLAVSDYTEVIRIN 66

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P + EA+  R  AR AL     A++D+ +A+    N A   H RG V  K      A+  
Sbjct: 67  PESVEAYYCRSLARLALKNLPGALEDVEQAIRLNINYAAAHHLRGTVRRKQGYIQDAIAS 126

Query: 506 LSACVKL-----DKEN----------------------KSAYTYLGLALSSIGEY----- 533
                +L     D+EN                      KS        ++S+ EY     
Sbjct: 127 FKQAAELYLQQKDQENCRLCLEKIKQLQPPKQSTIQPTKSPIA----PITSVNEYFTQLL 182

Query: 534 KKAEEAHLKAIQLDRN-FLEAWGHLTQFY-------QDLANSEKALECLQQVLYIDKRFS 585
            KAE+   +    D N  L+A     Q Y         + N  +A+    Q L ++ + +
Sbjct: 183 DKAEQGDTREAIADLNWILQADPQDAQAYCCRGVVRCKMGNYREAIADFNQALQLNFQDA 242

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
             Y  RG     LG H+ AI D +  + I P +      R + Y A+G Y  AI+DY  A
Sbjct: 243 VVYRNRGKARSLLGDHRGAIADFNQAIQIQPEDTLGYVARGNTYRAMGNYLGAIQDYGKA 302

Query: 646 LDLELDSMEKFVLQCLAF 663
           L +     + +  + +A+
Sbjct: 303 LQINPHDAQAYYNRGIAY 320



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 10/157 (6%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALI--GRGTARAFQRELEAAISDFTEAIQS 444
           RG+ +   G Y  AI+ F+Q L+ +  + +A++   RG AR+   +   AI+DF +AIQ 
Sbjct: 214 RGVVRCKMGNYREAIADFNQALQLN--FQDAVVYRNRGKARSLLGDHRGAIADFNQAIQI 271

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P     +  RG    A+G  + AIQD  KAL+  P+ A   + RGI     ++   AVE
Sbjct: 272 QPEDTLGYVARGNTYRAMGNYLGAIQDYGKALQINPHDAQAYYNRGIAYTFLEEMQNAVE 331

Query: 505 DLSA-----CVKLDKEN-KSAYTYLGLALSSIGEYKK 535
           D        C + D EN +     L    +SI EYK+
Sbjct: 332 DYQRAASIFCEQQDWENYQLTQDSLKQIQTSIPEYKQ 368



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 81/164 (49%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           SV+   ++ + +  +G    AI+  + IL+ DP   +A   RG  R        AI+DF 
Sbjct: 173 SVNEYFTQLLDKAEQGDTREAIADLNWILQADPQDAQAYCCRGVVRCKMGNYREAIADFN 232

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +A+Q N      ++ RG+AR+ LG+   AI D ++A++ +P        RG       ++
Sbjct: 233 QALQLNFQDAVVYRNRGKARSLLGDHRGAIADFNQAIQIQPEDTLGYVARGNTYRAMGNY 292

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
             A++D    ++++  +  AY   G+A + + E + A E + +A
Sbjct: 293 LGAIQDYGKALQINPHDAQAYYNRGIAYTFLEEMQNAVEDYQRA 336



 Score = 67.8 bits (164), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 120/299 (40%), Gaps = 40/299 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG+A  + G    A+S + ++++ +P   EA   R  AR   + L  A+ D  +AI+ 
Sbjct: 40  LQRGLAYYDSGAILLAVSDYTEVIRINPESVEAYYCRSLARLALKNLPGALEDVEQAIRL 99

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEF---------------------EPNSA 483
           N +   A   RG  R   G   +AI    +A E                       P  +
Sbjct: 100 NINYAAAHHLRGTVRRKQGYIQDAIASFKQAAELYLQQKDQENCRLCLEKIKQLQPPKQS 159

Query: 484 DILHERGI------VNFKFK---------DFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
            I   +        VN  F          D   A+ DL+  ++ D ++  AY   G+   
Sbjct: 160 TIQPTKSPIAPITSVNEYFTQLLDKAEQGDTREAIADLNWILQADPQDAQAYCCRGVVRC 219

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEA--WGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
            +G Y++A     +A+QL  NF +A  + +  +    L +   A+    Q + I    + 
Sbjct: 220 KMGNYREAIADFNQALQL--NFQDAVVYRNRGKARSLLGDHRGAIADFNQAIQIQPEDTL 277

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            Y  RG     +G +  AI+D    L I+P + +  Y R   Y  + E + A++DY  A
Sbjct: 278 GYVARGNTYRAMGNYLGAIQDYGKALQINPHDAQAYYNRGIAYTFLEEMQNAVEDYQRA 336



 Score = 43.1 bits (100), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 58/120 (48%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + +G+   K +D+  A+E+ S  +KL      AY   GLA    G    A   + + I+
Sbjct: 5   FYNQGLEKAKQRDYAGAIEEFSRALKLTPYFAEAYLQRGLAYYDSGAILLAVSDYTEVIR 64

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++   +EA+   +     L N   ALE ++Q + ++  ++ A+HLRG +    G  + AI
Sbjct: 65  INPESVEAYYCRSLARLALKNLPGALEDVEQAIRLNINYAAAHHLRGTVRRKQGYIQDAI 124


>gi|298480837|ref|ZP_06999032.1| TPR domain protein [Bacteroides sp. D22]
 gi|298272860|gb|EFI14426.1| TPR domain protein [Bacteroides sp. D22]
          Length = 676

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAETDCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD++AA EDL + +K+    
Sbjct: 98  LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            S +A+  LQQ
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------SARAIVKLQQ 205

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F++A  L          R L        + A+ D    L IDP+N    Y 
Sbjct: 206 AKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 265

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 266 RGLLRARVGDDNRAIEDFDFVIKMEPDNM 294



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A + F++ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K AE+   K +  Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 361



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A +DF  AI  
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWSARAIVKLQQAKYAEAEADFNRAIPL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 282 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 116/286 (40%), Gaps = 16/286 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D+T  I   
Sbjct: 265 NRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN---FKFKDFNAA 502
           P+    + +R +AR  +G+   A QD     EF+   A I  + G+ N    + KD    
Sbjct: 325 PNFLAGYYQRSEARRKIGDKKGAEQD-----EFKVMKAQIDKQNGVTNKDVAQNKDKENE 379

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-LEAWGHLTQFY 561
            E      K   +N + Y  + +A  S  E +   +   +    + N  LE    LT +Y
Sbjct: 380 EEGGEKTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNIKLEPMFALT-YY 438

Query: 562 QDLA------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           + ++      N  K +E L +   + KR         L    +  H   I   +S +  D
Sbjct: 439 EKMSDVKRSVNFHKYIEDLNRTGILPKRLRITNMEAPLTEEQVKVHFALIDTHTSAIVED 498

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             N    + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 499 EKNASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 544



 Score = 45.4 bits (106), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 39/80 (48%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AI+ NP   +A+  RG     LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 644

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            +   I DLSKA E    SA
Sbjct: 645 NNKLGISDLSKAGELGIVSA 664



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D   A +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 350 DEFKVMKAQIDKQN 363



 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 28/154 (18%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
           R I  +  +DF++AV DL+  + LD +   AY    L      EY+KAE+A         
Sbjct: 508 RAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRALIRCKQLEYQKAEQAVETDVVPGD 567

Query: 542 -------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
                              K I L  +F+ A+ +       L +   A+    + + ++ 
Sbjct: 568 NKRKEITAVDYEVVRKDLDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNP 627

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
            F+ AY  RGL    LG +K  I DLS    LGI
Sbjct: 628 DFADAYFNRGLTHIFLGNNKLGISDLSKAGELGI 661


>gi|75909713|ref|YP_324009.1| protein prenyltransferase subunit alpha [Anabaena variabilis ATCC
           29413]
 gi|75703438|gb|ABA23114.1| Protein prenyltransferase, alpha subunit [Anabaena variabilis ATCC
           29413]
          Length = 1007

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 114/270 (42%), Gaps = 37/270 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L++G+A  N G+   AI+ FD+ ++  P    A   RG A       E AI+ +  AI+ 
Sbjct: 159 LNQGVALANLGQLEQAITSFDKAIEFKPDDDSAWYSRGVALCNLGRFEQAIASYNRAIEF 218

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL---HERGIVNFKFKDFNA 501
             +  EAW  RG    +L    EA+     AL+  PN  ++    + RG   F  + F  
Sbjct: 219 KHNFPEAWTNRGVILNSLKLYQEALTSFETALQINPNFPEVFNAWYGRGNTLFNLEKFEE 278

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+      ++   ++ SA+   G+AL ++G++++A  ++ KAI+   +   AW +     
Sbjct: 279 AIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEAIASYDKAIEFKADDYSAWNY----- 333

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
                                        RG+ L  LG+ ++AI      +     +   
Sbjct: 334 -----------------------------RGVALANLGRFEEAIASYDKAIEFKADDYSA 364

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELD 651
            Y R      +G ++EAI  YD A++ + D
Sbjct: 365 WYNRGVALSNLGRFQEAITSYDKAIEFKAD 394



 Score = 85.5 bits (210), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 115/274 (41%), Gaps = 10/274 (3%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E E   + F +AI+      EAW  +G A A LG+  +AI    KA+EF+P+     + R
Sbjct: 136 EEEETSNQFNDAIELTSDEAEAWLNQGVALANLGQLEQAITSFDKAIEFKPDDDSAWYSR 195

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           G+       F  A+   +  ++       A+T  G+ L+S+  Y++A  +   A+Q++ N
Sbjct: 196 GVALCNLGRFEQAIASYNRAIEFKHNFPEAWTNRGVILNSLKLYQEALTSFETALQINPN 255

Query: 550 FLE---AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           F E   AW        +L   E+A+    + +        A++ RG+ L  LGQ ++AI 
Sbjct: 256 FPEVFNAWYGRGNTLFNLEKFEEAIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEAIA 315

Query: 607 DLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
                +     +      R      +G + EAI  YD A++ + D          A+Y +
Sbjct: 316 SYDKAIEFKADDYSAWNYRGVALANLGRFEEAIASYDKAIEFKADDYS-------AWYNR 368

Query: 667 EIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            +AL    +       +D   +    F   W  R
Sbjct: 369 GVALSNLGRFQEAITSYDKAIEFKADFYIAWMNR 402



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 104/212 (49%), Gaps = 3/212 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+A  N G++  AI+ +++ ++    +PEA   RG      +  + A++ F  A+Q N
Sbjct: 194 SRGVALCNLGRFEQAIASYNRAIEFKHNFPEAWTNRGVILNSLKLYQEALTSFETALQIN 253

Query: 446 PSAGE---AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           P+  E   AW  RG     L +  EAI    KA+EF+ +     + RG+       F  A
Sbjct: 254 PNFPEVFNAWYGRGNTLFNLEKFEEAIASYDKAIEFKADDYSAWYNRGVALDNLGQFEEA 313

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           +      ++   ++ SA+ Y G+AL+++G +++A  ++ KAI+   +   AW +      
Sbjct: 314 IASYDKAIEFKADDYSAWNYRGVALANLGRFEEAIASYDKAIEFKADDYSAWYNRGVALS 373

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           +L   ++A+    + +     F  A+  RG++
Sbjct: 374 NLGRFQEAITSYDKAIEFKADFYIAWMNRGIV 405


>gi|395786883|ref|ZP_10466610.1| hypothetical protein ME5_01928 [Bartonella tamiae Th239]
 gi|423718198|ref|ZP_17692388.1| hypothetical protein MEG_01928 [Bartonella tamiae Th307]
 gi|395423181|gb|EJF89377.1| hypothetical protein ME5_01928 [Bartonella tamiae Th239]
 gi|395426631|gb|EJF92758.1| hypothetical protein MEG_01928 [Bartonella tamiae Th307]
          Length = 270

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 82/155 (52%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           +A+  +++ L+  P Y  ALIGRG       +L+ A++DFT+AI++  + G AW  R   
Sbjct: 106 AALKDYNRALQIKPDYDVALIGRGNLYRLNGQLDNALNDFTKAIETGTTDGRAWHNRALI 165

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
             A G+   AI+D   A+  +P +    + RG+      D++ A +D +A ++LD     
Sbjct: 166 EQAQGQHQAAIKDFGAAMSRQPQAPAPYNGRGLSYIALSDWDNAFDDFNAAIRLDANIAE 225

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           +++   +     G++KKA  ++ KA+ LD  F  A
Sbjct: 226 SWSNQAMVYEHRGDFKKAHNSYAKALSLDPQFKPA 260



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 92/232 (39%), Gaps = 34/232 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I+  T  I+++P    A+  RG A    G++ +A+ D + AL+  P   +    R ++  
Sbjct: 40  IASLTNVIKADPRDPSAYNVRGAAYGRAGKTRDALADFTTALQLNPQFYNAYANRALIYR 99

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              + +AA++D +                                  +A+Q+  ++  A 
Sbjct: 100 HLNNTDAALKDYN----------------------------------RALQIKPDYDVAL 125

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                 Y+     + AL    + +       +A+H R L+    GQH+ AIKD  + +  
Sbjct: 126 IGRGNLYRLNGQLDNALNDFTKAIETGTTDGRAWHNRALIEQAQGQHQAAIKDFGAAMSR 185

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
            P        R   Y A+ ++  A  D++AA+ L+ +  E +  Q + +  +
Sbjct: 186 QPQAPAPYNGRGLSYIALSDWDNAFDDFNAAIRLDANIAESWSNQAMVYEHR 237


>gi|410671866|ref|YP_006924237.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
 gi|409170994|gb|AFV24869.1| hypothetical protein Mpsy_2668 [Methanolobus psychrophilus R15]
          Length = 368

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 120/245 (48%), Gaps = 22/245 (8%)

Query: 390 AQVNEG-------KYASAISIFDQILKEDPMYPEALIGRG-----------TARAFQREL 431
           A VN+G       +Y  A + + + ++ DP + EA  G+G           +A  F++ +
Sbjct: 94  AWVNKGDSLLEIYEYDEADACYGRAIEADPEFDEAWSGKGITLYLNGSYNESAEFFEKSI 153

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E +     + I S+P + EAW  +G + + +G + E+++   KA+E  P  A+    +G 
Sbjct: 154 EYS----DKKITSDPDSFEAWYNKGISFSYIGRTNESLECYEKAIELNPEYANAWRGKGY 209

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
              +   ++ A++     ++++ E+  A+   G  L     Y +A +   KAI++     
Sbjct: 210 ELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIHPEDA 269

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            AWG+       L   ++A+EC  +V+ ID  F+ A+  +G  L+ LG++ +AI+   + 
Sbjct: 270 YAWGNKGYMLGILERYDEAIECYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQCYDNA 329

Query: 612 LGIDP 616
           + I+P
Sbjct: 330 IEINP 334



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 7/226 (3%)

Query: 386 SRGIAQVNEGKYASAISIF-------DQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
            +GI     G Y  +   F       D+ +  DP   EA   +G + ++      ++  +
Sbjct: 131 GKGITLYLNGSYNESAEFFEKSIEYSDKKITSDPDSFEAWYNKGISFSYIGRTNESLECY 190

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
            +AI+ NP    AW+ +G     LG   EAIQ    A+E  P  A     +G V +KF  
Sbjct: 191 EKAIELNPEYANAWRGKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDR 250

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           ++ A++     +++  E+  A+   G  L  +  Y +A E + K I++D  F  AW    
Sbjct: 251 YDEAIKCFDKAIEIHPEDAYAWGNKGYMLGILERYDEAIECYDKVIEIDPEFTSAWKEKG 310

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
                L   ++A++C    + I+  ++ A+  +G  L+ LG+  +A
Sbjct: 311 YALYKLGRYDEAIQCYDNAIEINPEYADAWEGKGDALNELGRSDEA 356



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 14/308 (4%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  AI+  D I  +DP Y +AL  +G +         AI  + E I+ +P   +AW  +G
Sbjct: 40  YYEAIASVDNIQVDDPYYIDALNYKGESLYALSRYNEAIGCYNEVIEMDPENSKAWVNKG 99

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL---- 512
            +   + E  EA     +A+E +P   +    +GI  +    +N + E     ++     
Sbjct: 100 DSLLEIYEYDEADACYGRAIEADPEFDEAWSGKGITLYLNGSYNESAEFFEKSIEYSDKK 159

Query: 513 ---DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
              D ++  A+   G++ S IG   ++ E + KAI+L+  +  AW        +L   ++
Sbjct: 160 ITSDPDSFEAWYNKGISFSYIGRTNESLECYEKAIELNPEYANAWRGKGYELIELGRYDE 219

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A++C    + I+   + A+  +G +L+   ++ +AIK     + I P +      +    
Sbjct: 220 AIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIHPEDAYAWGNKGYML 279

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDI 689
             +  Y EAI+ YD  ++++ +          A+ +K  ALY   + +     +D   +I
Sbjct: 280 GILERYDEAIECYDKVIEIDPEFTS-------AWKEKGYALYKLGRYDEAIQCYDNAIEI 332

Query: 690 DPLFKEYW 697
           +P + + W
Sbjct: 333 NPEYADAW 340



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 90/191 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI+    G+   ++  +++ ++ +P Y  A  G+G         + AI  +  AI+ N
Sbjct: 172 NKGISFSYIGRTNESLECYEKAIELNPEYANAWRGKGYELIELGRYDEAIQCYDNAIEIN 231

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  +G          EAI+   KA+E  P  A     +G +    + ++ A+E 
Sbjct: 232 PEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIHPEDAYAWGNKGYMLGILERYDEAIEC 291

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +++D E  SA+   G AL  +G Y +A + +  AI+++  + +AW        +L 
Sbjct: 292 YDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQCYDNAIEINPEYADAWEGKGDALNELG 351

Query: 566 NSEKALECLQQ 576
            S++A EC ++
Sbjct: 352 RSDEANECYKK 362



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 74/161 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +G   +  G+Y  AI  +D  ++ +P    A +G+G         + AI  F +AI+ +
Sbjct: 206 GKGYELIELGRYDEAIQCYDNAIEINPEDAYAWVGKGYVLYKFDRYDEAIKCFDKAIEIH 265

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    AW  +G     L    EAI+   K +E +P       E+G   +K   ++ A++ 
Sbjct: 266 PEDAYAWGNKGYMLGILERYDEAIECYDKVIEIDPEFTSAWKEKGYALYKLGRYDEAIQC 325

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
               ++++ E   A+   G AL+ +G   +A E + KA +L
Sbjct: 326 YDNAIEINPEYADAWEGKGDALNELGRSDEANECYKKAEKL 366


>gi|393787559|ref|ZP_10375691.1| hypothetical protein HMPREF1068_01971 [Bacteroides nordii
           CL02T12C05]
 gi|392658794|gb|EIY52424.1| hypothetical protein HMPREF1068_01971 [Bacteroides nordii
           CL02T12C05]
          Length = 680

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    RG A+    + + A +D  +AI+ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRGLAKINLDDFQGAEADCDKAIERNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL + P +  + H   + + + KD+ AA EDL   + +  + 
Sbjct: 98  LARIRQNKYGGAIEDYQKALFYAPENVTLWHNLTLCHIQKKDYKAAEEDLGKLLAISPKY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH-------------------- 556
             AY   G       +  +A      AI+LD+   +AW                      
Sbjct: 158 TRAYLMRGEVALKQQDTIRALNDFNTAIELDKYDPDAWSSRAIVQLQQSKYAEAESDFNQ 217

Query: 557 ----------------LTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
                           L +F+Q+  N   A+      L ID      ++ RGLL   +G 
Sbjct: 218 AIRLSARNAGNYINRALARFHQN--NLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGD 275

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
             +AI+D +  L I+P N+   + R       G+YR AIKDY   +D
Sbjct: 276 DNRAIEDFNFVLEIEPDNMMATFNRGLLRAQTGDYRGAIKDYTTVID 322



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SR I Q+ + KYA A S F+Q ++         I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 SRAIVQLQQSKYAEAESDFNQAIRLSARNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D +  LE EP++      RG++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRAQVGDDNRAIEDFNFVLEIEPDNMMATFNRGLLRAQTGDYRGAIKD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA--IQLDR 548
            +  +       + Y     A   IG+ K AE    K   +QLDR
Sbjct: 317 YTTVIDQYPNFLAGYYQRAEARKKIGDRKGAEADDFKIMKMQLDR 361



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 102/263 (38%), Gaps = 34/263 (12%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           +  + +  Y +A     ++L   P Y  A + RG     Q++   A++DF  AI+ +   
Sbjct: 132 LCHIQKKDYKAAEEDLGKLLAISPKYTRAYLMRGEVALKQQDTIRALNDFNTAIELDKYD 191

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +AW  R   +    +  EA  D ++A+     +A     R +  F   +   A+ D   
Sbjct: 192 PDAWSSRAIVQLQQSKYAEAESDFNQAIRLSARNAGNYINRALARFHQNNLRGAMSDYDL 251

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + +D  N             IG Y             +R  L A          + +  
Sbjct: 252 ALDIDPNN------------FIGHY-------------NRGLLRAQ---------VGDDN 277

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+E    VL I+     A   RGLL    G ++ AIKD ++ +   P+ +   Y RA  
Sbjct: 278 RAIEDFNFVLEIEPDNMMATFNRGLLRAQTGDYRGAIKDYTTVIDQYPNFLAGYYQRAEA 337

Query: 629 YHAIGEYREAIKDYDAALDLELD 651
              IG+ + A  D    + ++LD
Sbjct: 338 RKKIGDRKGAEADDFKIMKMQLD 360



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 78/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +     A++ F+  ++ D   P+A   R   +  Q +   A SDF +AI+ 
Sbjct: 162 LMRGEVALKQQDTIRALNDFNTAIELDKYDPDAWSSRAIVQLQQSKYAEAESDFNQAIRL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SARNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D +  ++++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 282 DFNFVLEIEPDNMMATFNRGLLRAQTGDYRGAIKDYTTVIDQYPNFLAGY 331



 Score = 42.0 bits (97), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 43/87 (49%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y + I+  ++++   P +  A   R    A  ++  +A+ D+ +AI+ N    +A+  RG
Sbjct: 582 YDAVIADLNRVIALAPDFVYAYYNRANVSAMLKDYRSALVDYDKAIELNHDFADAYYNRG 641

Query: 457 QARAALGESVEAIQDLSKALEFEPNSA 483
                LG + + I DLSKA E    SA
Sbjct: 642 LTHIFLGNNKQGITDLSKAGELGIVSA 668



 Score = 41.6 bits (96), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 27/153 (17%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
           R +  +  +DF ++V+DL+  + LD     AY    L      EY+KAEEA         
Sbjct: 513 RALDFYLVQDFTSSVDDLTQAILLDDTFFPAYFMRALVRCKQLEYQKAEEATSAKQGIDS 572

Query: 542 ------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
                             + I L  +F+ A+ +       L +   AL    + + ++  
Sbjct: 573 SHKEIGAVDYDAVIADLNRVIALAPDFVYAYYNRANVSAMLKDYRSALVDYDKAIELNHD 632

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
           F+ AY+ RGL    LG +K+ I DLS    LGI
Sbjct: 633 FADAYYNRGLTHIFLGNNKQGITDLSKAGELGI 665



 Score = 41.6 bits (96), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   ++ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFNFVLEI 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AI+D +  ++  PN     ++R     K  D   A  
Sbjct: 290 EPDNMMATFNRGLLRAQTGDYRGAIKDYTTVIDQYPNFLAGYYQRAEARKKIGDRKGAEA 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  LD++N
Sbjct: 350 DDFKIMKMQLDRQN 363


>gi|86609922|ref|YP_478684.1| hypothetical protein CYB_2488 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558464|gb|ABD03421.1| TPR repeat protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 392

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 116/255 (45%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+  +A++ +D+ L+  P +PEA   RG+        + A++ +  A++  P   EA   
Sbjct: 91  GQAQAALASYDRALELKPDFPEAWNNRGSLLDDLGRHQEALASYERALRLKPDFFEARFN 150

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      LG   EA++   +AL   P+S +  +  G+       +  ++      + ++ 
Sbjct: 151 QANTLRQLGRYEEALRAYERALALSPDSPETWYLHGLTLASLGRWQGSLISYEKALAINP 210

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            N   +   GLAL  +  Y  A  ++ +A+QL       W      +  L N  +AL   
Sbjct: 211 VNAQVWQSRGLALFHLERYVDALASYERALQLGSESASLWAGHALAHHRLGNPMEALNSY 270

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L  D +  + +  RGL+L  L  ++ AI+     L +DPSN E  Y +A CY   G+
Sbjct: 271 DRALAQDPKRPQIWVQRGLVLMDLNLYELAIQSFDRALQMDPSNAEAHYAKACCYAWEGQ 330

Query: 635 YREAIKDYDAALDLE 649
             +A++  + AL LE
Sbjct: 331 VPQALQALEQALRLE 345



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/240 (21%), Positives = 96/240 (40%), Gaps = 34/240 (14%)

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           A   E  A +  F +A+   P    AW  R      LG++  A+    +ALE +P+  + 
Sbjct: 54  ALSAEQAAQLQPFEQAVGDQPQDPIAWYNRATTLDHLGQAQAALASYDRALELKPDFPEA 113

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG +                                  L  +G +++A  ++ +A++
Sbjct: 114 WNNRGSL----------------------------------LDDLGRHQEALASYERALR 139

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           L  +F EA  +     + L   E+AL   ++ L +     + ++L GL L  LG+ + ++
Sbjct: 140 LKPDFFEARFNQANTLRQLGRYEEALRAYERALALSPDSPETWYLHGLTLASLGRWQGSL 199

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                 L I+P N +    R      +  Y +A+  Y+ AL L  +S   +    LA ++
Sbjct: 200 ISYEKALAINPVNAQVWQSRGLALFHLERYVDALASYERALQLGSESASLWAGHALAHHR 259



 Score = 44.3 bits (103), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
            +A    G    A++ +D+ L +DP  P+  + RG         E AI  F  A+Q +PS
Sbjct: 254 ALAHHRLGNPMEALNSYDRALAQDPKRPQIWVQRGLVLMDLNLYELAIQSFDRALQMDPS 313

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
             EA   +    A  G+  +A+Q L +AL  EP
Sbjct: 314 NAEAHYAKACCYAWEGQVPQALQALEQALRLEP 346



 Score = 40.0 bits (92), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG---- 129
           NRA     L   +  +   D+AL+L P   +A+  +G     LGR +EAL+ +E+     
Sbjct: 82  NRATTLDHLGQAQAALASYDRALELKPDFPEAWNNRGSLLDDLGRHQEALASYERALRLK 141

Query: 130 ---YEHALHQSADLKQFLELEELLTAAKQDRSVTCEYDVSNSMSSLTVSESG 178
              +E   +Q+  L+Q    EE L A ++  +++ +   +  +  LT++  G
Sbjct: 142 PDFFEARFNQANTLRQLGRYEEALRAYERALALSPDSPETWYLHGLTLASLG 193


>gi|373849290|ref|ZP_09592091.1| Tetratricopeptide TPR_2 repeat-containing protein [Opitutaceae
           bacterium TAV5]
 gi|372475455|gb|EHP35464.1| Tetratricopeptide TPR_2 repeat-containing protein [Opitutaceae
           bacterium TAV5]
          Length = 706

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 114/251 (45%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           +G +A AI+ +D+ LK  P   +    RG +     + +AA+ DF+  I   P+  EAW 
Sbjct: 49  KGNHADAIAAYDRALKLLPEEADVWYARGESHLALVKPDAALGDFSHVITLRPAMAEAWA 108

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            RGQA  A+ +  EA +D ++ALE +P  A I  +RG ++    + +AA+ D    + L 
Sbjct: 109 ARGQAYLAMAKPDEAFRDFTQALELDPKQAGIREQRGRISLDRGELDAALADFDGALALS 168

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
                A+        + G+ + A  A+ +AI  D    +A+   T    +     +A   
Sbjct: 169 PGLALAHLGRARVFHARGDTQGAIAAYSEAIAADPLLADAFRGRTAMLLEEKRFGEAARD 228

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
           +   L +  R +  +  R  +    G  + A+ D++  L + P N   L  +A      G
Sbjct: 229 IDSALVLAPRDASLWLARARVWRATGFPENALVDIARSLELSPRNTAALVEQALALEDTG 288

Query: 634 EYREAIKDYDA 644
           +   A+++ DA
Sbjct: 289 DTAAALRNLDA 299



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 90/232 (38%), Gaps = 4/232 (1%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI+ +  A++  P   + W  RG++  AL +   A+ D S  +   P  A+    RG   
Sbjct: 55  AIAAYDRALKLLPEEADVWYARGESHLALVKPDAALGDFSHVITLRPAMAEAWAARGQAY 114

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
                 + A  D +  ++LD +        G      GE   A      A+ L      A
Sbjct: 115 LAMAKPDEAFRDFTQALELDPKQAGIREQRGRISLDRGELDAALADFDGALALSPGL--A 172

Query: 554 WGHL--TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
             HL   + +    +++ A+    + +  D   + A+  R  +L    +  +A +D+ S 
Sbjct: 173 LAHLGRARVFHARGDTQGAIAAYSEAIAADPLLADAFRGRTAMLLEEKRFGEAARDIDSA 232

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           L + P +      RA  + A G    A+ D   +L+L   +    V Q LA 
Sbjct: 233 LVLAPRDASLWLARARVWRATGFPENALVDIARSLELSPRNTAALVEQALAL 284



 Score = 47.0 bits (110), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 1/114 (0%)

Query: 415 PEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSK 474
           P   I RG A      LE A++ + EA++++P   +A K  G     L    EA + LS 
Sbjct: 477 PVVQINRGEALHRLGRLEEAVTAYQEALRTDPGLADARKDLGLLLMELNRLDEADEQLSD 536

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           A +  P S D  + RG+V     D+ AA++     +  D + K +Y +L L L+
Sbjct: 537 AGKLAPGSGDAPNLRGLVCLISADYPAAIDRFQEAID-DYKTKQSYVHLSLYLA 589



 Score = 43.9 bits (102), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 10/271 (3%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A +   K   A   F Q L+ DP        RG     + EL+AA++DF  A+  +
Sbjct: 109 ARGQAYLAMAKPDEAFRDFTQALELDPKQAGIREQRGRISLDRGELDAALADFDGALALS 168

Query: 446 PSAGEAWKRRGQARA--ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
           P  G A    G+AR   A G++  AI   S+A+  +P  AD    R  +  + K F  A 
Sbjct: 169 P--GLALAHLGRARVFHARGDTQGAIAAYSEAIAADPLLADAFRGRTAMLLEEKRFGEAA 226

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D+ + + L   + S +        + G  + A     ++++L      A        +D
Sbjct: 227 RDIDSALVLAPRDASLWLARARVWRATGFPENALVDIARSLELSPRNTAALVEQALALED 286

Query: 564 LANSEKALECLQQV--LYIDKRFSKAYHLRGLLLHGLGQHKKAIKD-LSSGLGIDPSNIE 620
             ++  AL  L  V     D+ F+    L+   ++G  +    I   L+  +   P + E
Sbjct: 287 TGDTAAALRNLDAVRKAAPDENFA---WLQTARIYGKLRRVAEIPPLLTPFIEAHPQDAE 343

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            L  R S +  +     A+ D+ AAL +  D
Sbjct: 344 ALSTRGSAWLDLDRLDSAVADFRAALAINPD 374


>gi|423299400|ref|ZP_17277425.1| hypothetical protein HMPREF1057_00566 [Bacteroides finegoldii
           CL09T03C10]
 gi|408473209|gb|EKJ91731.1| hypothetical protein HMPREF1057_00566 [Bacteroides finegoldii
           CL09T03C10]
          Length = 676

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD+++A EDL + +K+    
Sbjct: 98  LARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDSAKEDLESLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            + +A+  LQQ
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALTDFNKALELDKYDPDAW------------AARAIVKLQQ 205

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F +A HL          R L        + A+ D    L IDP+N    Y 
Sbjct: 206 SKYAEAESDFDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 265

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 266 RGLLRARVGDDNRAIEDFDFVIQMEPDNM 294



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A S FD+ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVKLQQSKYAEAESDFDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K AE+   K +  Q+D+
Sbjct: 317 YTTVINQYPNFLTGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 361



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A SDF  AI  
Sbjct: 162 LMRGEVSLQQKDTIAALTDFNKALELDKYDPDAWAARAIVKLQQSKYAEAESDFDRAIHL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    ++++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 282 DFDFVIQMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLTGY 331



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/253 (20%), Positives = 101/253 (39%), Gaps = 34/253 (13%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           ++ + +  Y SA    + +LK  P Y  A + RG     Q++  AA++DF +A++ +   
Sbjct: 132 LSHIQKKDYDSAKEDLESLLKVSPRYTRAYLMRGEVSLQQKDTIAALTDFNKALELDKYD 191

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +AW  R   +    +  EA  D  +A+     +A     R +  F   +   A+ D   
Sbjct: 192 PDAWAARAIVKLQQSKYAEAESDFDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDL 251

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + +D  N   +   GL  + +G+  +A E     IQ++ + + A  +            
Sbjct: 252 ALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQMEPDNMMAVFN------------ 299

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
                                 RGLL    G ++ AI+D ++ +   P+ +   Y R+  
Sbjct: 300 ----------------------RGLLRAQTGDYRGAIQDYTTVINQYPNFLTGYYQRSEA 337

Query: 629 YHAIGEYREAIKD 641
              IG+ + A +D
Sbjct: 338 RRKIGDKKGAEQD 350



 Score = 58.2 bits (139), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 103/236 (43%), Gaps = 9/236 (3%)

Query: 458 ARAAL--GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           AR AL   + V +IQ  ++ +  +P   +    R +     +DF  A  D  A ++ +  
Sbjct: 29  ARNALYFEDYVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPF 88

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   GLA     ++  A E + KA+  D   +  W +LT  +    + + A E L+
Sbjct: 89  VVGAYQIRGLARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDSAKEDLE 148

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
            +L +  R+++AY +RG +         A+ D +  L +D  + +    RA       +Y
Sbjct: 149 SLLKVSPRYTRAYLMRGEVSLQQKDTIAALTDFNKALELDKYDPDAWAARAIVKLQQSKY 208

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
            EA  D+D A+ L   +   ++ + LA + +       + +      +D+  DIDP
Sbjct: 209 AEAESDFDRAIHLSAKNAGNYINRALARFHQ-------NNLRGAMSDYDLALDIDP 257



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 117/283 (41%), Gaps = 8/283 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD +++ +P    A+  RG  RA   +   AI D+T  I   
Sbjct: 265 NRGLLRARVGDDNRAIEDFDFVIQMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    + +R +AR  +G+   A QD  K ++ + +  + +  + +   K K   +  ED
Sbjct: 325 PNFLTGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDKQNGVTNKDVAQNKDKADGSGDED 384

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-LEAWGHLTQFYQDL 564
                K   +N + Y  + +A  S  E +   +   +    + N  LE    LT +Y+ +
Sbjct: 385 GEKTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNITLEPMFALT-YYEKM 443

Query: 565 A------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           +      N  K +E L +   + KR         L    +  H   I   +S +  D  +
Sbjct: 444 SDVKRSVNFHKYIEDLNRTGILSKRLRITNMEAPLTEEQVKFHFALIDTHTSAIVADEKS 503

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
               + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 504 APKRFARAIDFYLVQDFSSAVADLTQTILLDGDFFPAYFMRAL 546



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   IQ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIQM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D   A +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLTGYYQRSEARRKIGDKKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 350 DEFKVMKAQIDKQN 363



 Score = 46.2 bits (108), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI+D+ +AI+ NP   +A+  RG     LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIADYDKAIELNPDFADAYFNRGLTHIFLG 644

Query: 464 ESVEAIQDLSKALEFEPNSA 483
            +   I DLSKA E    SA
Sbjct: 645 NNKLGISDLSKAGELGIVSA 664


>gi|124004663|ref|ZP_01689507.1| tetratricopeptide repeat family protein [Microscilla marina ATCC
           23134]
 gi|123989786|gb|EAY29315.1| tetratricopeptide repeat family protein [Microscilla marina ATCC
           23134]
          Length = 428

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 128/267 (47%), Gaps = 5/267 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +S+G  +V E +  +AI ++ Q +K+D  Y  A   R  A    ++L  AI D+++AI+ 
Sbjct: 16  VSKGDEKVEEQRVKAAIRLYSQAIKKDKTYAMAYAKRAKAYQANKKLSLAIKDYSKAIKL 75

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N     A++ R  +R    +  +AI D ++A+          + R +  +   D+ +A  
Sbjct: 76  NNKLAGAYRGRAYSRFLREDYKDAIHDYNEAIRLHEKDTFSFYRRAVSKYHISDYRSAFM 135

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D++  +KL+K       Y GL   ++ + K +   + +AI+L   + EA+ H     + L
Sbjct: 136 DINKALKLNKFRPEFNYYRGLIRVALKDSKNSLSDYDEAIRLKPKYAEAYYHRGLAKKQL 195

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N + AL    + + ++  + +AY  RG      G+  KA+ D S  + I   N E  Y 
Sbjct: 196 -NYDGALTDYNKAIRLNPVYHEAYFSRGSYFVAEGKQDKALDDFSKAIKI--YNKEEAYF 252

Query: 625 --RASCYHAIGEYREAIKDYDAALDLE 649
             RA  +    + + A+KD D A++L+
Sbjct: 253 AERAKAHEQNKDLKAALKDLDRAIELD 279



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 35/280 (12%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           + +  K      +F   RG+ +V      +++S +D+ ++  P Y EA   RG A+  Q 
Sbjct: 137 INKALKLNKFRPEFNYYRGLIRVALKDSKNSLSDYDEAIRLKPKYAEAYYHRGLAKK-QL 195

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
             + A++D+ +AI+ NP   EA+  RG    A G+  +A+ D SKA++          ER
Sbjct: 196 NYDGALTDYNKAIRLNPVYHEAYFSRGSYFVAEGKQDKALDDFSKAIKIYNKEEAYFAER 255

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
              + + KD  AA++DL   ++LD  N   Y                  A LK +     
Sbjct: 256 AKAHEQNKDLKAALKDLDRAIELDGRNLKFYF---------------SRARLKGL----- 295

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
                         L + + A++ +Q ++    +  +AY  RG +      +K A++D S
Sbjct: 296 --------------LKDFDGAMQDIQFIIDEQPKNVEAYIQRGTIKEIKLDYKGALEDFS 341

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           + + + P N E    R    +    +  A++D+D A+ L+
Sbjct: 342 TAMKMAPKNPEIYNHRGVIKYKSRNFTGALEDFDKAISLD 381



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 118/233 (50%), Gaps = 1/233 (0%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           +AL+ +G  +  ++ ++AAI  +++AI+ + +   A+ +R +A  A  +   AI+D SKA
Sbjct: 13  KALVSKGDEKVEEQRVKAAIRLYSQAIKKDKTYAMAYAKRAKAYQANKKLSLAIKDYSKA 72

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           ++     A     R    F  +D+  A+ D +  ++L +++  ++    ++   I +Y+ 
Sbjct: 73  IKLNNKLAGAYRGRAYSRFLREDYKDAIHDYNEAIRLHEKDTFSFYRRAVSKYHISDYRS 132

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
           A     KA++L++   E   +       L +S+ +L    + + +  ++++AY+ RGL  
Sbjct: 133 AFMDINKALKLNKFRPEFNYYRGLIRVALKDSKNSLSDYDEAIRLKPKYAEAYYHRGLAK 192

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             L  +  A+ D +  + ++P   E  + R S + A G+  +A+ D+  A+ +
Sbjct: 193 KQLN-YDGALTDYNKAIRLNPVYHEAYFSRGSYFVAEGKQDKALDDFSKAIKI 244



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 137/324 (42%), Gaps = 47/324 (14%)

Query: 359 SNEAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           S   K++K + +    ++K+   + +LS  I       Y+ AI + +++         A 
Sbjct: 36  SQAIKKDKTYAMAYAKRAKAYQANKKLSLAIKD-----YSKAIKLNNKL-------AGAY 83

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
            GR  +R  + + + AI D+ EAI+ +     ++ RR  ++  + +   A  D++KAL+ 
Sbjct: 84  RGRAYSRFLREDYKDAIHDYNEAIRLHEKDTFSFYRRAVSKYHISDYRSAFMDINKALKL 143

Query: 479 EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEE 538
                +  + RG++    KD   ++ D    ++L  +   AY + GLA   +  Y  A  
Sbjct: 144 NKFRPEFNYYRGLIRVALKDSKNSLSDYDEAIRLKPKYAEAYYHRGLAKKQLN-YDGALT 202

Query: 539 AHLKAIQLDRNFLEAWGHLTQFY-----QDLA-----------NSEKA------------ 570
            + KAI+L+  + EA+     ++     QD A           N E+A            
Sbjct: 203 DYNKAIRLNPVYHEAYFSRGSYFVAEGKQDKALDDFSKAIKIYNKEEAYFAERAKAHEQN 262

Query: 571 ------LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
                 L+ L + + +D R  K Y  R  L   L     A++D+   +   P N+E    
Sbjct: 263 KDLKAALKDLDRAIELDGRNLKFYFSRARLKGLLKDFDGAMQDIQFIIDEQPKNVEAYIQ 322

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
           R +      +Y+ A++D+  A+ +
Sbjct: 323 RGTIKEIKLDYKGALEDFSTAMKM 346



 Score = 47.0 bits (110), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +V+  + RG  +  +  Y  A+  F   +K  P  PE    RG  +   R    A+ DF 
Sbjct: 316 NVEAYIQRGTIKEIKLDYKGALEDFSTAMKMAPKNPEIYNHRGVIKYKSRNFTGALEDFD 375

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
           +AI  +P   +A+  +G  +  +G+  EA ++L KA E+
Sbjct: 376 KAISLDPLNNKAYYNKGMTQMYMGKKEEACKNLRKAGEY 414


>gi|428226918|ref|YP_007111015.1| hypothetical protein GEI7407_3496 [Geitlerinema sp. PCC 7407]
 gi|427986819|gb|AFY67963.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
           PCC 7407]
          Length = 466

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 117/259 (45%), Gaps = 5/259 (1%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           +A  G G A       E AI+ + +A++  P++ E W RRG +   L    EAI +  +A
Sbjct: 34  QAWYGLGNALFEAGRYEEAIARYDKALEIQPTSAEIWGRRGASLGQLRRDDEAIANFDRA 93

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           +  +P+ A   + RG+V  +    + A++     ++   E   A+T+    L  +G Y++
Sbjct: 94  IALQPDLATAWYGRGLVLERQGQDDEALKSFETALEHHPEYYEAWTFRSYMLQKLGRYEE 153

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
               +  A++L     + W +L +    L   E+A+  L   L +  R  +A++ RG  L
Sbjct: 154 VVAGYETALKLQPGDYKTWYNLGKALVHLDRREEAIASLDTALALHPRHYRAWYNRGATL 213

Query: 596 HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL-----DLEL 650
             LG+ ++AI      + + P        R   +  +G Y EA+  ++ AL     D + 
Sbjct: 214 VELGRPEEAIASFDRAIALKPDCDYAWKHRGLAWEQLGNYAEAVTSFERALAVAPKDCDA 273

Query: 651 DSMEKFVLQCLAFYQKEIA 669
                + LQ +  Y++ IA
Sbjct: 274 WKHYSYALQRVGRYEEAIA 292



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 105/240 (43%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A V+  +   AI+  D  L   P +  A   RG         E AI+ F  AI   P 
Sbjct: 176 GKALVHLDRREEAIASLDTALALHPRHYRAWYNRGATLVELGRPEEAIASFDRAIALKPD 235

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              AWK RG A   LG   EA+    +AL   P   D          +   +  A+  L 
Sbjct: 236 CDYAWKHRGLAWEQLGNYAEAVTSFERALAVAPKDCDAWKHYSYALQRVGRYEEAIASLD 295

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             V L  ++   +   G++L  +  Y++A +++ +AI L+ +  ++W +     + +   
Sbjct: 296 QVVSLQPDDPRNWYQRGVSLGKLNRYEEAVDSYDRAIALNPHDPKSWYNRGVALEHMGCP 355

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E AL  + + L +  R   A+ +RGLLL  L Q ++A+  L   L + P+N    Y +A+
Sbjct: 356 EAALMNINRSLELHPRNHYAWLVRGLLLWQLRQPEEAMASLDESLRLQPNNPSAWYSKAA 415



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 119/280 (42%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            RG+    +G+   A+  F+  L+  P Y EA   R          E  ++ +  A++  
Sbjct: 106 GRGLVLERQGQDDEALKSFETALEHHPEYYEAWTFRSYMLQKLGRYEEVVAGYETALKLQ 165

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   + W   G+A   L    EAI  L  AL   P      + RG    +      A+  
Sbjct: 166 PGDYKTWYNLGKALVHLDRREEAIASLDTALALHPRHYRAWYNRGATLVELGRPEEAIAS 225

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L  +   A+ + GLA   +G Y +A  +  +A+ +     +AW H +   Q + 
Sbjct: 226 FDRAIALKPDCDYAWKHRGLAWEQLGNYAEAVTSFERALAVAPKDCDAWKHYSYALQRVG 285

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             E+A+  L QV+ +     + ++ RG+ L  L ++++A+      + ++P + +  Y R
Sbjct: 286 RYEEAIASLDQVVSLQPDDPRNWYQRGVSLGKLNRYEEAVDSYDRAIALNPHDPKSWYNR 345

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
                 +G    A+ + + +L+L   +   ++++ L  +Q
Sbjct: 346 GVALEHMGCPEAALMNINRSLELHPRNHYAWLVRGLLLWQ 385



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 112/283 (39%), Gaps = 7/283 (2%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A    G+Y  AI+ +D+ L+  P   E    RG +    R  + AI++F  AI   P 
Sbjct: 40  GNALFEAGRYEEAIARYDKALEIQPTSAEIWGRRGASLGQLRRDDEAIANFDRAIALQPD 99

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              AW  RG      G+  EA++    ALE  P   +    R  +  K   +   V    
Sbjct: 100 LATAWYGRGLVLERQGQDDEALKSFETALEHHPEYYEAWTFRSYMLQKLGRYEEVVAGYE 159

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +KL   +   +  LG AL  +   ++A  +   A+ L      AW +      +L   
Sbjct: 160 TALKLQPGDYKTWYNLGKALVHLDRREEAIASLDTALALHPRHYRAWYNRGATLVELGRP 219

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           E+A+    + + +      A+  RGL    LG + +A+      L + P + +     + 
Sbjct: 220 EEAIASFDRAIALKPDCDYAWKHRGLAWEQLGNYAEAVTSFERALAVAPKDCDAWKHYSY 279

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
               +G Y EAI   D  + L+ D           +YQ+ ++L
Sbjct: 280 ALQRVGRYEEAIASLDQVVSLQPDDPRN-------WYQRGVSL 315



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/303 (21%), Positives = 127/303 (41%), Gaps = 17/303 (5%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+Y   ++ ++  LK  P   +     G A       E AI+    A+  +P    AW  
Sbjct: 149 GRYEEVVAGYETALKLQPGDYKTWYNLGKALVHLDRREEAIASLDTALALHPRHYRAWYN 208

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG     LG   EAI    +A+  +P+       RG+   +  ++  AV      + +  
Sbjct: 209 RGATLVELGRPEEAIASFDRAIALKPDCDYAWKHRGLAWEQLGNYAEAVTSFERALAVAP 268

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           ++  A+ +   AL  +G Y++A  +  + + L  +    W         L   E+A++  
Sbjct: 269 KDCDAWKHYSYALQRVGRYEEAIASLDQVVSLQPDDPRNWYQRGVSLGKLNRYEEAVDSY 328

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + + ++    K+++ RG+ L  +G  + A+ +++  L + P N     +R      + +
Sbjct: 329 DRAIALNPHDPKSWYNRGVALEHMGCPEAALMNINRSLELHPRNHYAWLVRGLLLWQLRQ 388

Query: 635 YREAIKDYDAALDLELDS------------MEKFVLQCLAFYQKEIAL----YTA-SKIN 677
             EA+   D +L L+ ++             +K + Q   + QK I L    Y A +K++
Sbjct: 389 PEEAMASLDESLRLQPNNPSAWYSKAAWCIAQKQLGQTFLYLQKAIMLNPGIYRAMAKMD 448

Query: 678 SEF 680
           +EF
Sbjct: 449 TEF 451



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 63/141 (44%)

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
           C  +   +  A+  LG AL   G Y++A   + KA+++     E WG        L   +
Sbjct: 25  CKMILNRDSQAWYGLGNALFEAGRYEEAIARYDKALEIQPTSAEIWGRRGASLGQLRRDD 84

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+    + + +    + A++ RGL+L   GQ  +A+K   + L   P   E    R+  
Sbjct: 85  EAIANFDRAIALQPDLATAWYGRGLVLERQGQDDEALKSFETALEHHPEYYEAWTFRSYM 144

Query: 629 YHAIGEYREAIKDYDAALDLE 649
              +G Y E +  Y+ AL L+
Sbjct: 145 LQKLGRYEEVVAGYETALKLQ 165


>gi|365890554|ref|ZP_09429068.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
           3809]
 gi|365333560|emb|CCE01599.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
           3809]
          Length = 453

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 109/238 (45%), Gaps = 5/238 (2%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           +RL   + +   G    A +     +  DP   EA   RG     Q  L+ A++D+ +AI
Sbjct: 100 YRLRGDLMREAGGDAGKATADLSMAITLDPNDAEAYELRGVVYTEQHRLDRALADYDQAI 159

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
           +  P   +A+  RG A    G++ +A+QD  +A+  +P+       R     K    + A
Sbjct: 160 RLKPDYAQAYADRGVAFYLRGDNEKAVQDYDEAIRLDPDRPRTFTNRAAAYKKLGQIDKA 219

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD--RNFLEAWGHLTQF 560
           + D    ++ D +    +   GL  +++ EY KA   + +AI+L    NFL   G   QF
Sbjct: 220 LADDHEAIRRDPKVPEYFDNRGLTYAAMKEYDKAIADYDQAIKLQPKPNFLTNRGDSYQF 279

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
             +L +   AL      L +D  F+ AY+ R +L   +G+  KA+ D  + L +DP N
Sbjct: 280 KGELGS---ALSDYDAALRLDPDFALAYNNRAVLFRKMGERAKALADYEAALRLDPGN 334



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 2/219 (0%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQ-ARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           A+ D   AI  +     A++ RG   R A G++ +A  DLS A+  +PN A+    RG+V
Sbjct: 82  ALKDVDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSMAITLDPNDAEAYELRGVV 141

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
             +    + A+ D    ++L  +   AY   G+A    G+ +KA + + +AI+LD +   
Sbjct: 142 YTEQHRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQDYDEAIRLDPDRPR 201

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
            + +    Y+ L   +KAL    + +  D +  + +  RGL    + ++ KAI D    +
Sbjct: 202 TFTNRAAAYKKLGQIDKALADDHEAIRRDPKVPEYFDNRGLTYAAMKEYDKAIADYDQAI 261

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            + P     L  R   Y   GE   A+ DYDAAL L+ D
Sbjct: 262 KLQPKP-NFLTNRGDSYQFKGELGSALSDYDAALRLDPD 299



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 569 KALECLQQVLYIDKRFSKAYHLRG-LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           +AL+ + + + +D + ++AY LRG L+    G   KA  DLS  + +DP++ E   LR  
Sbjct: 81  QALKDVDRAIALDGKNARAYRLRGDLMREAGGDAGKATADLSMAITLDPNDAEAYELRGV 140

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
            Y        A+ DYD A+ L+ D  + +  + +AFY
Sbjct: 141 VYTEQHRLDRALADYDQAIRLKPDYAQAYADRGVAFY 177



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 1/116 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+      +Y  AI+ +DQ +K  P  P  L  RG +  F+ EL +A+SD+  A++ +
Sbjct: 239 NRGLTYAAMKEYDKAIADYDQAIKLQPK-PNFLTNRGDSYQFKGELGSALSDYDAALRLD 297

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           P    A+  R      +GE  +A+ D   AL  +P + +    R  +  + K F A
Sbjct: 298 PDFALAYNNRAVLFRKMGERAKALADYEAALRLDPGNDNAAAGRRAMLAEIKKFGA 353


>gi|298244040|ref|ZP_06967847.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297557094|gb|EFH90958.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 515

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 127/299 (42%), Gaps = 49/299 (16%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAISDFTEA 441
           RG      G Y SA++ F Q +K  P      +  ALI RG       + + A++D T+A
Sbjct: 12  RGTVYALAGDYQSALTEFTQAIKLQPSEAANYHSRALIYRGL-----NDPQHALADLTQA 66

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I   P    A+ +RG     L +  +AI D S  L FE N    L  R I  +  + F  
Sbjct: 67  ISLQPEYASAYYQRGLTYYVLKDYHKAIHDFSMVLSFEHNDLQALLGRAISYYALEAFPQ 126

Query: 502 AVEDLSACVKLDKENK---SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           A+ +L   +  D E      AY+    A ++  +Y +A E   +A+    + +     + 
Sbjct: 127 AILNLDRAIAFDPEEAGRLGAYSNRAQAHAAQQQYNEALENFQRALHFAPDDVLLLNRIG 186

Query: 559 QFYQDLANSEKAL---------------------------ECLQQ-------VLYIDKRF 584
             Y D  + E+A                            +C Q+        L +D   
Sbjct: 187 ATYTDSGHPEQAFPYYDRALKLSTSTPFTYNNRGEAYRLQQCYQEAIADFNRALALDPTL 246

Query: 585 SKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL-RASCYHAIGEYREAIKDY 642
           +  Y+ RGL L  L +H +A++D    L ++P +++ +Y  RA+ Y A+G Y EA++D+
Sbjct: 247 ATVYYNRGLTLAALNEHTRALQDFQHALELNP-DLDIVYADRAASYAALGMYNEALQDF 304



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 109/270 (40%), Gaps = 41/270 (15%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RGT  A   + ++A+++FT+AI+  PS    +  R      L +   A+ DL++A+  +P
Sbjct: 12  RGTVYALAGDYQSALTEFTQAIKLQPSEAANYHSRALIYRGLNDPQHALADLTQAISLQP 71

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG--------- 531
             A   ++RG+  +  KD++ A+ D S  +  +  +  A   LG A+S            
Sbjct: 72  EYASAYYQRGLTYYVLKDYHKAIHDFSMVLSFEHNDLQA--LLGRAISYYALEAFPQAIL 129

Query: 532 ------------------------------EYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
                                         +Y +A E   +A+    + +     +   Y
Sbjct: 130 NLDRAIAFDPEEAGRLGAYSNRAQAHAAQQQYNEALENFQRALHFAPDDVLLLNRIGATY 189

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            D  + E+A     + L +       Y+ RG        +++AI D +  L +DP+    
Sbjct: 190 TDSGHPEQAFPYYDRALKLSTSTPFTYNNRGEAYRLQQCYQEAIADFNRALALDPTLATV 249

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLELD 651
            Y R     A+ E+  A++D+  AL+L  D
Sbjct: 250 YYNRGLTLAALNEHTRALQDFQHALELNPD 279



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 10/167 (5%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G    + G    A   +D+ LK     P     RG A   Q+  + AI+DF  A+  +P+
Sbjct: 186 GATYTDSGHPEQAFPYYDRALKLSTSTPFTYNNRGEAYRLQQCYQEAIADFNRALALDPT 245

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
               +  RG   AAL E   A+QD   ALE  P+   +  +R         +N A++D  
Sbjct: 246 LATVYYNRGLTLAALNEHTRALQDFQHALELNPDLDIVYADRAASYAALGMYNEALQDFQ 305

Query: 508 ACVKLDKENKSAYTYLGLALSSIG-EYKKAEEAHLKAIQLDRNFLEA 553
             +  D+EN        LA+   G  Y +  EAH KA+Q D N++ A
Sbjct: 306 RSITHDEENV-------LAIFQRGTTYLRLNEAH-KALQ-DFNYVLA 343



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 67/135 (49%)

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
           +D +N   Y   G   +  G+Y+ A     +AI+L  +    +      Y+ L + + AL
Sbjct: 1   MDSDNTLEYQKRGTVYALAGDYQSALTEFTQAIKLQPSEAANYHSRALIYRGLNDPQHAL 60

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
             L Q + +   ++ AY+ RGL  + L  + KAI D S  L  + ++++ L  RA  Y+A
Sbjct: 61  ADLTQAISLQPEYASAYYQRGLTYYVLKDYHKAIHDFSMVLSFEHNDLQALLGRAISYYA 120

Query: 632 IGEYREAIKDYDAAL 646
           +  + +AI + D A+
Sbjct: 121 LEAFPQAILNLDRAI 135



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 19/208 (9%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +++RG   A  G+   A+ + ++A++ +P+ A   H R ++     D   A+ DL+  + 
Sbjct: 9   YQKRGTVYALAGDYQSALTEFTQAIKLQPSEAANYHSRALIYRGLNDPQHALADLTQAIS 68

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA-WGHLTQFYQDLANSEKA 570
           L  E  SAY   GL    + +Y KA       +  + N L+A  G    +Y        A
Sbjct: 69  LQPEYASAYYQRGLTYYVLKDYHKAIHDFSMVLSFEHNDLQALLGRAISYY--------A 120

Query: 571 LECLQQ-VLYIDKRFS---------KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
           LE   Q +L +D+  +          AY  R        Q+ +A+++    L   P ++ 
Sbjct: 121 LEAFPQAILNLDRAIAFDPEEAGRLGAYSNRAQAHAAQQQYNEALENFQRALHFAPDDVL 180

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDL 648
            L    + Y   G   +A   YD AL L
Sbjct: 181 LLNRIGATYTDSGHPEQAFPYYDRALKL 208



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 132/334 (39%), Gaps = 42/334 (12%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+       Y  AI  F  +L  +    +AL+GR  +         AI +   AI  +P
Sbjct: 80  RGLTYYVLKDYHKAIHDFSMVLSFEHNDLQALLGRAISYYALEAFPQAILNLDRAIAFDP 139

Query: 447 S-AGE--AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN---------F 494
             AG   A+  R QA AA  +  EA+++  +AL F P+   +L+  G            F
Sbjct: 140 EEAGRLGAYSNRAQAHAAQQQYNEALENFQRALHFAPDDVLLLNRIGATYTDSGHPEQAF 199

Query: 495 KFKD-------------------------FNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
            + D                         +  A+ D +  + LD    + Y   GL L++
Sbjct: 200 PYYDRALKLSTSTPFTYNNRGEAYRLQQCYQEAIADFNRALALDPTLATVYYNRGLTLAA 259

Query: 530 IGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           + E+ +A +    A++L+ +    +      Y  L    +AL+  Q+ +  D+    A  
Sbjct: 260 LNEHTRALQDFQHALELNPDLDIVYADRAASYAALGMYNEALQDFQRSITHDEENVLAIF 319

Query: 590 LRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
            RG     L +  KA++D +  L  +P+       RA  +  +G   +A  DY  + +L+
Sbjct: 320 QRGTTYLRLNEAHKALQDFNYVLAHEPNLARAYAQRAEAHLRLGNLVQARVDYRQSWELD 379

Query: 650 LDSMEK-----FVLQCLAFYQKEIALYTASKINS 678
              +E      ++  CL  Y   I+  T  +I S
Sbjct: 380 STHIEPAWMGAWLDMCLDDYPGAISPETLEEIAS 413



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 47/100 (47%)

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           + AL    Q + +    +  YH R L+  GL   + A+ DL+  + + P      Y R  
Sbjct: 23  QSALTEFTQAIKLQPSEAANYHSRALIYRGLNDPQHALADLTQAISLQPEYASAYYQRGL 82

Query: 628 CYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
            Y+ + +Y +AI D+   L  E + ++  + + +++Y  E
Sbjct: 83  TYYVLKDYHKAIHDFSMVLSFEHNDLQALLGRAISYYALE 122


>gi|434404736|ref|YP_007147621.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
 gi|428258991|gb|AFZ24941.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
          Length = 279

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 60/199 (30%), Positives = 103/199 (51%), Gaps = 1/199 (0%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           DF + +G  Q   G   +AI+ + + +  +P Y  A   RG A       E AI+D+++A
Sbjct: 61  DFYI-QGQNQHARGNSQAAIAAYSKAISLNPRYAPAFRSRGLAYFDIGNKEGAIADYSQA 119

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++ NP+  EA+  RG ARA+LG++  AI D ++A+   PN A+  + RG       D N 
Sbjct: 120 LRLNPNDAEAFNNRGNARASLGDNKTAIADYNEAIRLAPNYAEAFNNRGNARATQGDKNG 179

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A++D +  + LD +   AY   G A ++ G+ + A   + +A++L+ NF  A+ +     
Sbjct: 180 ALDDYNQAILLDPKYTIAYNNRGNARAAKGDPQGAIADYNEAVRLNPNFGPAYNNRGNAR 239

Query: 562 QDLANSEKALECLQQVLYI 580
               +   AL+ LQ+   I
Sbjct: 240 AANKDKMGALQDLQRAAAI 258



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 5/159 (3%)

Query: 376 SKSISVDFRL-----SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           SK+IS++ R      SRG+A  + G    AI+ + Q L+ +P   EA   RG ARA   +
Sbjct: 83  SKAISLNPRYAPAFRSRGLAYFDIGNKEGAIADYSQALRLNPNDAEAFNNRGNARASLGD 142

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + AI+D+ EAI+  P+  EA+  RG ARA  G+   A+ D ++A+  +P      + RG
Sbjct: 143 NKTAIADYNEAIRLAPNYAEAFNNRGNARATQGDKNGALDDYNQAILLDPKYTIAYNNRG 202

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSS 529
                  D   A+ D +  V+L+     AY   G A ++
Sbjct: 203 NARAAKGDPQGAIADYNEAVRLNPNFGPAYNNRGNARAA 241



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 17/214 (7%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +GQ + A G S  AI   SKA+   P  A     RG+  F   +   A+ D S  ++L+ 
Sbjct: 65  QGQNQHARGNSQAAIAAYSKAISLNPRYAPAFRSRGLAYFDIGNKEGAIADYSQALRLNP 124

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +  A+   G A +S+G+ K A   + +AI+L  N+ EA+ +         +   AL+  
Sbjct: 125 NDAEAFNNRGNARASLGDNKTAIADYNEAIRLAPNYAEAFNNRGNARATQGDKNGALDDY 184

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            Q + +D +++ AY+ RG      G  + AI D +  + ++P+           Y+  G 
Sbjct: 185 NQAILLDPKYTIAYNNRGNARAAKGDPQGAIADYNEAVRLNPN-------FGPAYNNRGN 237

Query: 635 YREAIKDYDAAL-DLELDSMEKFVLQCLAFYQKE 667
            R A KD   AL DL+         +  A +QKE
Sbjct: 238 ARAANKDKMGALQDLQ---------RAAAIFQKE 262



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A+  +G    A+  ++Q +  DP Y  A   RG ARA + + + AI+D+ EA++ N
Sbjct: 166 NRGNARATQGDKNGALDDYNQAILLDPKYTIAYNNRGNARAAKGDPQGAIADYNEAVRLN 225

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALE-FEPNSADILHERGIVNFK 495
           P+ G A+  RG ARAA  + + A+QDL +A   F+    D L+++ + N +
Sbjct: 226 PNFGPAYNNRGNARAANKDKMGALQDLQRAAAIFQKEGNDDLYQQVMKNIQ 276



 Score = 66.2 bits (160), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 82/183 (44%)

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           +AAI+ +++AI  NP    A++ RG A   +G    AI D S+AL   PN A+  + RG 
Sbjct: 76  QAAIAAYSKAISLNPRYAPAFRSRGLAYFDIGNKEGAIADYSQALRLNPNDAEAFNNRGN 135

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                 D   A+ D +  ++L      A+   G A ++ G+   A + + +AI LD  + 
Sbjct: 136 ARASLGDNKTAIADYNEAIRLAPNYAEAFNNRGNARATQGDKNGALDDYNQAILLDPKYT 195

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
            A+ +         + + A+    + + ++  F  AY+ RG           A++DL   
Sbjct: 196 IAYNNRGNARAAKGDPQGAIADYNEAVRLNPNFGPAYNNRGNARAANKDKMGALQDLQRA 255

Query: 612 LGI 614
             I
Sbjct: 256 AAI 258


>gi|295085226|emb|CBK66749.1| Tetratricopeptide repeat. [Bacteroides xylanisolvens XB1A]
          Length = 651

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 13  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAETDCDAAIQRNPFVVGAYQIRG 72

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD++AA EDL + +K+    
Sbjct: 73  LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSPRY 132

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            S +A+  LQQ
Sbjct: 133 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------SARAIVKLQQ 180

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F++A  L          R L        + A+ D    L IDP+N    Y 
Sbjct: 181 AKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 240

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 241 RGLLRARVGDDNRAIEDFDFVIKMEPDNM 269



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A + F++ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 172 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 231

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 232 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 291

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K AE+   K +  Q+D+
Sbjct: 292 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 336



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A +DF  AI  
Sbjct: 137 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWSARAIVKLQQAKYAEAEADFNRAIPL 196

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 197 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIE 256

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 257 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 306



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 116/286 (40%), Gaps = 16/286 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D+T  I   
Sbjct: 240 NRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 299

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN---FKFKDFNAA 502
           P+    + +R +AR  +G+   A QD     EF+   A I  + G+ N    + KD    
Sbjct: 300 PNFLAGYYQRSEARRKIGDKKGAEQD-----EFKVMKAQIDKQNGVTNKDVAQNKDKENE 354

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-LEAWGHLTQFY 561
            E      K   +N + Y  + +A  S  E +   +   +    + N  LE    LT +Y
Sbjct: 355 EEGGEKTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNIKLEPMFALT-YY 413

Query: 562 QDLA------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           + ++      N  K +E L +   + KR         L    +  H   I   +S +  D
Sbjct: 414 EKMSDVKRSVNFHKYIEDLNRTGILPKRLRITNMEAPLTEEQVKVHFALIDTHTSAIVED 473

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             N    + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 474 DKNASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 519



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AI+ NP   +A+  RG     LG
Sbjct: 560 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIVDYDKAIELNPDFADAYFNRGLTHIFLG 619

Query: 464 ESVEAIQDLSKALEF 478
            +   I DLSKA E 
Sbjct: 620 NNKLGISDLSKAGEL 634



 Score = 44.7 bits (104), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 205 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKM 264

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D   A +
Sbjct: 265 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 324

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 325 DEFKVMKAQIDKQN 338



 Score = 39.7 bits (91), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 28/154 (18%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
           R I  +  +DF++AV DL+  + LD +   AY    L      EY+KAE+A         
Sbjct: 483 RAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRALIRCKQLEYQKAEQAVETDVVPGD 542

Query: 542 -------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
                              K I L  +F+ A+ +       L +   A+    + + ++ 
Sbjct: 543 NKRKEITAVDYEVVRKDLDKVINLAPDFVYAYYNRANVSAMLKDYRAAIVDYDKAIELNP 602

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
            F+ AY  RGL    LG +K  I DLS    LGI
Sbjct: 603 DFADAYFNRGLTHIFLGNNKLGISDLSKAGELGI 636


>gi|294643797|ref|ZP_06721595.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294808457|ref|ZP_06767210.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|292640886|gb|EFF59106.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
 gi|294444385|gb|EFG13099.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 651

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 13  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAETDCDAAIQRNPFVVGAYQIRG 72

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD++AA EDL + +K+    
Sbjct: 73  LARIRQSKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSPRY 132

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            S +A+  LQQ
Sbjct: 133 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------SARAIVKLQQ 180

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F++A  L          R L        + A+ D    L IDP+N    Y 
Sbjct: 181 AKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 240

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 241 RGLLRARVGDDNRAIEDFDFVIKMEPDNM 269



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A + F++ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 172 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 231

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 232 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 291

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K AE+   K +  Q+D+
Sbjct: 292 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 336



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A +DF  AI  
Sbjct: 137 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWSARAIVKLQQAKYAEAEADFNRAIPL 196

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 197 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIE 256

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 257 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 306



 Score = 52.4 bits (124), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 116/286 (40%), Gaps = 16/286 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D+T  I   
Sbjct: 240 NRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 299

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN---FKFKDFNAA 502
           P+    + +R +AR  +G+   A QD     EF+   A I  + G+ N    + KD    
Sbjct: 300 PNFLAGYYQRSEARRKIGDKKGAEQD-----EFKVMKAQIDKQNGVTNKDVAQNKDKENE 354

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-LEAWGHLTQFY 561
            E      K   +N + Y  + +A  S  E +   +   +    + N  LE    LT +Y
Sbjct: 355 EEGGEKTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNIKLEPMFALT-YY 413

Query: 562 QDLA------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           + ++      N  K +E L +   + KR         L    +  H   I   +S +  D
Sbjct: 414 EKMSDVKRSVNFHKYIEGLNRTGILPKRLRITNMEAPLTEEQVKVHFALIDTHTSAIVED 473

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             N    + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 474 DKNASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 519



 Score = 45.4 bits (106), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AI+ NP   +A+  RG     LG
Sbjct: 560 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIVDYDKAIELNPDFADAYFNRGLTHIFLG 619

Query: 464 ESVEAIQDLSKALEF 478
            +   I DLSKA E 
Sbjct: 620 NNKLGISDLSKAGEL 634



 Score = 44.7 bits (104), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 205 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKM 264

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D   A +
Sbjct: 265 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 324

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 325 DEFKVMKAQIDKQN 338



 Score = 39.7 bits (91), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 28/154 (18%)

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHL------- 541
           R I  +  +DF++AV DL+  + LD +   AY    L      EY+KAE+A         
Sbjct: 483 RAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRALIRCKQLEYQKAEQAVETDVVPGD 542

Query: 542 -------------------KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
                              K I L  +F+ A+ +       L +   A+    + + ++ 
Sbjct: 543 NKRKEITAVDYEVVRKDLDKVINLAPDFVYAYYNRANVSAMLKDYRAAIVDYDKAIELNP 602

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSG--LGI 614
            F+ AY  RGL    LG +K  I DLS    LGI
Sbjct: 603 DFADAYFNRGLTHIFLGNNKLGISDLSKAGELGI 636


>gi|239947992|ref|ZP_04699745.1| tetratricopeptide repeat-containing protein [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922268|gb|EER22292.1| tetratricopeptide repeat-containing protein [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 428

 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 149/297 (50%), Gaps = 8/297 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI+ +  GKY  AI  +++++       E+   +G + A   + + A+ ++  AI+  
Sbjct: 129 NKGISLIKLGKYQDAIENYNRVITYQSNDAESYNNKGYSLAQLAKYQEAVENYNLAIKYK 188

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  +G +  AL +  EAI++   A++++ + A++ + +G+   K   +  A+++
Sbjct: 189 PNFITAYYNKGISLIALRKYQEAIRNFDLAIKYKFDDAELYYNKGVAFEKLGHYQEAIKN 248

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF-YQDL 564
            +  +K   +   AY   G+A + +G Y+ A E +   I+   +  E + +      + L
Sbjct: 249 FNLTIKYQPDYAKAYFGKGVAYAELGNYQDAIENYDLFIKYKSDDAEGYNNNKGIALEGL 308

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             S +A++     +     F   YH +G+  + LG++ +A+++ +  +   P   E  YL
Sbjct: 309 GRSHEAIKNYDLAIKYKPDFVLPYHNKGIAFNKLGKYHEAVENFNFAIKHQPYAAEA-YL 367

Query: 625 RASCYHAI-GEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTASK 675
           +  C  A+  +Y+EAI+++D A+  + D  E +     VLQ L   Q+ I L+  +K
Sbjct: 368 KKGCSLALLTKYQEAIENFDLAIQYKPDLAESYTEKGKVLQKLGKRQEAIELFNKAK 424



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/331 (22%), Positives = 147/331 (44%), Gaps = 52/331 (15%)

Query: 328 YSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVDFRLSR 387
           YS +  + N+ S S  +  ++ +K D+    +N +  N       +SK+          +
Sbjct: 17  YSTAIANTNELSSSIVNNKQVMWKEDIEHNLTNNSNLN-------VSKA-------YYDK 62

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           GI      K+  AI  +D  +K  P Y EA + +G + A   + + A+ ++  AI+  P 
Sbjct: 63  GIECARLAKHQDAIKNYDLAIKYQPNYIEAYLEKGYSLAQLAKYQEAVENYNLAIKYKPD 122

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
              A+  +G +   LG+  +AI++ ++ + ++ N A+  + +G    +   +  AVE+ +
Sbjct: 123 FIPAYYNKGISLIKLGKYQDAIENYNRVITYQSNDAESYNNKGYSLAQLAKYQEAVENYN 182

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             +K      +AY   G++L ++ +Y++A           RNF            DLA  
Sbjct: 183 LAIKYKPNFITAYYNKGISLIALRKYQEA----------IRNF------------DLA-- 218

Query: 568 EKALECLQQVLYIDKRFSKA--YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
                       I  +F  A  Y+ +G+    LG +++AIK+ +  +   P   +  + +
Sbjct: 219 ------------IKYKFDDAELYYNKGVAFEKLGHYQEAIKNFNLTIKYQPDYAKAYFGK 266

Query: 626 ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
              Y  +G Y++AI++YD  +  + D  E +
Sbjct: 267 GVAYAELGNYQDAIENYDLFIKYKSDDAEGY 297



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/220 (22%), Positives = 109/220 (49%)

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
           SN +  +A+  +G   A L +  +AI++   A++++PN  +   E+G    +   +  AV
Sbjct: 51  SNLNVSKAYYDKGIECARLAKHQDAIKNYDLAIKYQPNYIEAYLEKGYSLAQLAKYQEAV 110

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           E+ +  +K   +   AY   G++L  +G+Y+ A E + + I    N  E++ +       
Sbjct: 111 ENYNLAIKYKPDFIPAYYNKGISLIKLGKYQDAIENYNRVITYQSNDAESYNNKGYSLAQ 170

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           LA  ++A+E     +     F  AY+ +G+ L  L ++++AI++    +     + E  Y
Sbjct: 171 LAKYQEAVENYNLAIKYKPNFITAYYNKGISLIALRKYQEAIRNFDLAIKYKFDDAELYY 230

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
            +   +  +G Y+EAIK+++  +  + D  + +  + +A+
Sbjct: 231 NKGVAFEKLGHYQEAIKNFNLTIKYQPDYAKAYFGKGVAY 270



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 5/217 (2%)

Query: 361 EAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           EA RN    +    K K    +   ++G+A    G Y  AI  F+  +K  P Y +A  G
Sbjct: 210 EAIRNFDLAI----KYKFDDAELYYNKGVAFEKLGHYQEAIKNFNLTIKYQPDYAKAYFG 265

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR-RGQARAALGESVEAIQDLSKALEFE 479
           +G A A     + AI ++   I+      E +   +G A   LG S EAI++   A++++
Sbjct: 266 KGVAYAELGNYQDAIENYDLFIKYKSDDAEGYNNNKGIALEGLGRSHEAIKNYDLAIKYK 325

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           P+     H +GI   K   ++ AVE+ +  +K       AY   G +L+ + +Y++A E 
Sbjct: 326 PDFVLPYHNKGIAFNKLGKYHEAVENFNFAIKHQPYAAEAYLKKGCSLALLTKYQEAIEN 385

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
              AIQ   +  E++    +  Q L   ++A+E   +
Sbjct: 386 FDLAIQYKPDLAESYTEKGKVLQKLGKRQEAIELFNK 422


>gi|428204802|ref|YP_007100428.1| hypothetical protein Chro_5686 [Chroococcidiopsis thermalis PCC
           7203]
 gi|428012921|gb|AFY91037.1| Tetratricopeptide TPR_1 repeat-containing protein
           [Chroococcidiopsis thermalis PCC 7203]
          Length = 243

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 54/165 (32%), Positives = 83/165 (50%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           + L  RG  +  + + + AI DF   ++ NPS  EA+  RG  RA LG    A+ D + A
Sbjct: 47  QELFNRGVEKTERGDFQGAIEDFDGVVRLNPSFIEAYCNRGFVRAELGNYKAAMADFNSA 106

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
           L   P+ AD  ++RG V  +  +F+ A+ D +A ++ D     AY   GLA S IG  + 
Sbjct: 107 LRINPHHADAYNKRGTVLAQRGNFSEAITDFNAALRYDVNFADAYYNRGLAHSGIGNAQA 166

Query: 536 AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
           A   + +AI+L  +  EA+G+       L +   A+  LQQ   I
Sbjct: 167 AIADYDRAIRLQPDMAEAYGNRGTVRYHLGDRSGAIADLQQAAQI 211



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/152 (30%), Positives = 76/152 (50%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            +RG+ +   G +  AI  FD +++ +P + EA   RG  RA     +AA++DF  A++ 
Sbjct: 50  FNRGVEKTERGDFQGAIEDFDGVVRLNPSFIEAYCNRGFVRAELGNYKAAMADFNSALRI 109

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP   +A+ +RG   A  G   EAI D + AL ++ N AD  + RG+ +    +  AA+ 
Sbjct: 110 NPHHADAYNKRGTVLAQRGNFSEAITDFNAALRYDVNFADAYYNRGLAHSGIGNAQAAIA 169

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           D    ++L  +   AY   G     +G+   A
Sbjct: 170 DYDRAIRLQPDMAEAYGNRGTVRYHLGDRSGA 201



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 67/127 (52%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  +   G Y +A++ F+  L+ +P + +A   RGT  A +     AI+DF  A++ +
Sbjct: 85  NRGFVRAELGNYKAAMADFNSALRINPHHADAYNKRGTVLAQRGNFSEAITDFNAALRYD 144

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  +A+  RG A + +G +  AI D  +A+  +P+ A+    RG V +   D + A+ D
Sbjct: 145 VNFADAYYNRGLAHSGIGNAQAAIADYDRAIRLQPDMAEAYGNRGTVRYHLGDRSGAIAD 204

Query: 506 LSACVKL 512
           L    ++
Sbjct: 205 LQQAAQI 211



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 68/160 (42%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           L  RG+   +  DF  A+ED    V+L+     AY   G   + +G YK A      A++
Sbjct: 49  LFNRGVEKTERGDFQGAIEDFDGVVRLNPSFIEAYCNRGFVRAELGNYKAAMADFNSALR 108

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           ++ +  +A+           N  +A+      L  D  F+ AY+ RGL   G+G  + AI
Sbjct: 109 INPHHADAYNKRGTVLAQRGNFSEAITDFNAALRYDVNFADAYYNRGLAHSGIGNAQAAI 168

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
            D    + + P   E    R +  + +G+   AI D   A
Sbjct: 169 ADYDRAIRLQPDMAEAYGNRGTVRYHLGDRSGAIADLQQA 208



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 6/174 (3%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG  +   G+   AI+D    +   P+  +    RG V  +  ++ AA+ D ++ ++++ 
Sbjct: 52  RGVEKTERGDFQGAIEDFDGVVRLNPSFIEAYCNRGFVRAELGNYKAAMADFNSALRINP 111

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +  AY   G  L+  G + +A      A++ D NF +A+ +    +  + N++ A+   
Sbjct: 112 HHADAYNKRGTVLAQRGNFSEAITDFNAALRYDVNFADAYYNRGLAHSGIGNAQAAIADY 171

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS------SGLGIDPSNIECL 622
            + + +    ++AY  RG + + LG    AI DL       S  G +P++ + L
Sbjct: 172 DRAIRLQPDMAEAYGNRGTVRYHLGDRSGAIADLQQAAQIFSAQGNEPAHQQAL 225


>gi|408531235|emb|CCK29409.1| hypothetical protein BN159_5030 [Streptomyces davawensis JCM 4913]
          Length = 1038

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 115/251 (45%), Gaps = 1/251 (0%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G++   ++  D+++  DPM   A   RG +R    +   A+SDF  A+        A  R
Sbjct: 571 GRHEDVVAGCDRVIALDPMQARAWANRGQSRHALGDSTGALSDFDRALSIEGDYLWALVR 630

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R +   + G   E+  DL +A++  P SA +  ERG        F  AV +L    +L  
Sbjct: 631 RSRVYRSQGRLDESFADLDRAVDLAPASAWLASERGDAYRLVDRFEEAVRELGRACELVP 690

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +  SA+   G AL+ +G +++A  A+ +AI+L+ ++  A  H      +L + E     L
Sbjct: 691 DYASAHAGRGYALAELGRHEEARAAYDRAIELNADYPWALVHRASLKGELGDQEGMFTDL 750

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + + ID     A   R     G+G H +A+ D+     +  S+ E L LRA   + +G 
Sbjct: 751 DRAVAIDGS-GWAIVRRAAAHQGVGHHAEALADVGRAEELGRSDPELLVLRAGILYRLGR 809

Query: 635 YREAIKDYDAA 645
             EA+   D A
Sbjct: 810 TVEAVTLLDQA 820



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 6/234 (2%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG+     GE   AI + ++AL  +P SA + H+RG+      D  AA+ DL     L  
Sbjct: 495 RGRELTKEGEFARAIDECNRALALDPQSAWVFHDRGVALAAQGDVTAALADLEQAEALRP 554

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           ++          L  +G ++       + I LD     AW +  Q    L +S  AL   
Sbjct: 555 DDVRILINQQPILQMLGRHEDVVAGCDRVIALDPMQARAWANRGQSRHALGDSTGALSDF 614

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L I+  +  A   R  +    G+  ++  DL   + + P++      R   Y  +  
Sbjct: 615 DRALSIEGDYLWALVRRSRVYRSQGRLDESFADLDRAVDLAPASAWLASERGDAYRLVDR 674

Query: 635 YREAIKDYDAALDLELD-----SMEKFVLQCLAFYQKEIALY-TASKINSEFCW 682
           + EA+++   A +L  D     +   + L  L  +++  A Y  A ++N+++ W
Sbjct: 675 FEEAVRELGRACELVPDYASAHAGRGYALAELGRHEEARAAYDRAIELNADYPW 728


>gi|119357636|ref|YP_912280.1| hypothetical protein Cpha266_1840 [Chlorobium phaeobacteroides DSM
           266]
 gi|119354985|gb|ABL65856.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
          Length = 3560

 Score = 87.0 bits (214), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 126/284 (44%)

Query: 384 RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
           +L R +    EG+   A +++ +IL   P + +AL    T  A + E E A++ F + I 
Sbjct: 18  KLQRALKFHQEGRLDEAEALYREILSSSPEHFDALQLSATIAAQRHEFEKAVTLFDQVIH 77

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
            NP    +   RG A  AL    EA++   KA+  +P+ AD    R +V  +   +  A+
Sbjct: 78  INPVHPGSLNNRGNALKALQRYEEALESYEKAIAIKPDYADAYSNRSVVLKELMRYEEAL 137

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
                 + ++ +   AY    +       Y++A  ++ +AI L  +++EA+ +    Y  
Sbjct: 138 ASYEKAIAINPDFAEAYYNRAVIFYDSDRYEEALASYDRAIVLKPDYVEAYANRGNVYLK 197

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           L   E AL   ++ + +     +AY+  G  L  L ++++A+      + +     E   
Sbjct: 198 LKRYEDALGSYKKAIALKLECDEAYYNMGNALLELQRYEEALASYEKAIALKVDYFEAYS 257

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
            R      +  Y +A+  Y+ A+ L+    E +  QCL  ++ E
Sbjct: 258 NRGVVLLVLRRYEDALVSYEKAIALKPHHAEAYANQCLVLHEME 301



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 120/257 (46%), Gaps = 2/257 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           ++  A+++FDQ++  +P++P +L  RG A +A QR  E A+  + +AI   P   +A+  
Sbjct: 64  EFEKAVTLFDQVIHINPVHPGSLNNRGNALKALQR-YEEALESYEKAIAIKPDYADAYSN 122

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R      L    EA+    KA+   P+ A+  + R ++ +    +  A+      + L  
Sbjct: 123 RSVVLKELMRYEEALASYEKAIAINPDFAEAYYNRAVIFYDSDRYEEALASYDRAIVLKP 182

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   AY   G     +  Y+ A  ++ KAI L     EA+ ++     +L   E+AL   
Sbjct: 183 DYVEAYANRGNVYLKLKRYEDALGSYKKAIALKLECDEAYYNMGNALLELQRYEEALASY 242

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           ++ + +   + +AY  RG++L  L +++ A+      + + P + E    +    H +  
Sbjct: 243 EKAIALKVDYFEAYSNRGVVLLVLRRYEDALVSYEKAIALKPHHAEAYANQCLVLHEMER 302

Query: 635 YREAIKDYDAALDLELD 651
           Y +A+   + AL L+ D
Sbjct: 303 YEDALVSCEKALSLKPD 319



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 3/215 (1%)

Query: 384  RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQ 443
            +L R +    EG+   A +++ +IL   P + +AL    T  A + + E A++ F +A+ 
Sbjct: 2906 KLQRALKLHQEGRLDEAEALYREILSSSPEHFDALRLSATIAAQRHDSEKALALFDQALA 2965

Query: 444  SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
              P    +   RG A   L    EA+    +A+  +P+ AD    RG    K   +  A+
Sbjct: 2966 IKPDHARSLNNRGIALQELKRYEEALASYERAIVLKPDYADAYSNRGNTLMKMNQYKEAL 3025

Query: 504  EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            E     + L  EN  A  + G AL  +  Y ++  ++ KAI L     E + H     Q 
Sbjct: 3026 ESYERAIALKPENADACFHQGNALQELKRYNESLASYEKAIALKSVNAEVYAHRGVVLQK 3085

Query: 564  LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
            L+  E A+   +Q L +   +     L GL LH +
Sbjct: 3086 LSRFEDAVLNYKQALLLKPDYD---FLPGLCLHAI 3117



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 7/282 (2%)

Query: 372  RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            R +K +S+    +L R +    EG+   A +++ +IL   P + +AL    T  A + + 
Sbjct: 1471 RSTKEESV----KLQRALKLHQEGRLDEAEALYREILSFSPEHFDALQLSATIAAQRHDS 1526

Query: 432  EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
            E A+  F +A+   P    +   RG A   L    EA++   +A+  +P+  +    RG 
Sbjct: 1527 EKALVLFDQALAIKPDHARSLNNRGIALQELKRYDEALESYERAIAVKPDFIEPYSNRGN 1586

Query: 492  VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
               + K +  A+    + + L  EN+  Y +  + L ++  Y++A   +   + L  +  
Sbjct: 1587 TLQELKRYEEALACYDSAIALKPENEQFYYHRAVVLHNMKRYEEALLNYDHVLALKPDCA 1646

Query: 552  EAWGHLTQFYQDLANSEKALECLQQVLYI--DKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
            EA+ +       L   E+AL    QV+ +  D     AY  RG++L  LG+++ A     
Sbjct: 1647 EAYSNRGNILTGLKRYEEALASYDQVIALKPDNNLV-AYSNRGVVLLELGRYRDAFLSFE 1705

Query: 610  SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            + +  +  + +    R      +  Y EAI  Y+ AL L+ D
Sbjct: 1706 NTIEQNSDSADAYCHRGLALRKLKRYEEAIGSYEKALTLKPD 1747



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 84/174 (48%)

Query: 476  LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
            L  +P   + L     +  + K +  AV      +++D ++  ++  LG+AL  +G Y++
Sbjct: 2251 LSIQPLHIEALQFLASMATRRKKYTDAVSLFERALEIDPDHPVSWCTLGIALHELGRYEE 2310

Query: 536  AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
            A  ++ KAI L   F+E + +    +  L   ++AL   ++ L I+  +++AY  RG  L
Sbjct: 2311 ALASYEKAIVLYPGFVEVYSNRGNTFLILKRYQEALSSYEKALAINPEYTRAYFNRGSAL 2370

Query: 596  HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
              L ++++A+ D      + P  I      A     +  YREAI  Y+ AL L+
Sbjct: 2371 LELKRYEEALADYDKVTALKPDYIVAYINCAVVLQELKRYREAIGSYEKALALK 2424



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 7/225 (3%)

Query: 372  RISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
            R +K +S+    +L R +    EG+   A  I+ +IL   P++ EAL    +    +++ 
Sbjct: 2219 RSTKEESV----KLQRALKLHQEGRLDEAEVIYQEILSIQPLHIEALQFLASMATRRKKY 2274

Query: 432  EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
              A+S F  A++ +P    +W   G A   LG   EA+    KA+   P   ++   RG 
Sbjct: 2275 TDAVSLFERALEIDPDHPVSWCTLGIALHELGRYEEALASYEKAIVLYPGFVEVYSNRGN 2334

Query: 492  VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
                 K +  A+      + ++ E   AY   G AL  +  Y++A   + K   L  +++
Sbjct: 2335 TFLILKRYQEALSSYEKALAINPEYTRAYFNRGSALLELKRYEEALADYDKVTALKPDYI 2394

Query: 552  EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
             A+ +     Q+L    +A+   ++ L +   ++    LRGL L+
Sbjct: 2395 VAYINCAVVLQELKRYREAIGSYEKALALKPEYN---FLRGLYLY 2436



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 89/198 (44%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
            +L R +    EG+   A     +IL+  P Y E L    T    ++  E A++ F +A+
Sbjct: 799 LKLQRALKLHQEGRLDEAELFCTEILRFKPGYFEVLQLSATIALQRKASEKAVALFDQAL 858

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
              P    +   RG A   L    EA+    KA+   P  A     RG    + K +  A
Sbjct: 859 AIKPDHARSLNNRGIALQELKCYEEALGSYEKAIAINPEYAMAYSNRGNTLQELKRYEDA 918

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           VE     + L+  + +AY+  G+AL  +  Y+ A E+H +AI L  ++ +A+ + +   +
Sbjct: 919 VESYDRAIALNPYSATAYSNRGVALLKLVRYEDALESHDRAIVLKPDYADAYYNRSVVLE 978

Query: 563 DLANSEKALECLQQVLYI 580
            L   E+A+   ++ L +
Sbjct: 979 ILMRYEEAIASYEKALLL 996



 Score = 60.8 bits (146), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/209 (20%), Positives = 90/209 (43%), Gaps = 6/209 (2%)

Query: 476  LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKK 535
            L F P   D L     +  +  D   A+      + +  ++  +    G+AL  +  Y +
Sbjct: 1503 LSFSPEHFDALQLSATIAAQRHDSEKALVLFDQALAIKPDHARSLNNRGIALQELKRYDE 1562

Query: 536  AEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL 595
            A E++ +AI +  +F+E + +     Q+L   E+AL C    + +     + Y+ R ++L
Sbjct: 1563 ALESYERAIAVKPDFIEPYSNRGNTLQELKRYEEALACYDSAIALKPENEQFYYHRAVVL 1622

Query: 596  HGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
            H + ++++A+ +    L + P   E    R +    +  Y EA+  YD  + L+ D+   
Sbjct: 1623 HNMKRYEEALLNYDHVLALKPDCAEAYSNRGNILTGLKRYEEALASYDQVIALKPDN--- 1679

Query: 656  FVLQCLAFYQKEIALYTASKINSEFCWFD 684
                 +A+  + + L    +    F  F+
Sbjct: 1680 ---NLVAYSNRGVVLLELGRYRDAFLSFE 1705



 Score = 58.9 bits (141), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 3/202 (1%)

Query: 431  LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            L+ A + + E + S+P   +A +      A   +S +A+    +AL  +P+ A  L+ RG
Sbjct: 2919 LDEAEALYREILSSSPEHFDALRLSATIAAQRHDSEKALALFDQALAIKPDHARSLNNRG 2978

Query: 491  IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            I   + K +  A+      + L  +   AY+  G  L  + +YK+A E++ +AI L    
Sbjct: 2979 IALQELKRYEEALASYERAIVLKPDYADAYSNRGNTLMKMNQYKEALESYERAIALKPEN 3038

Query: 551  LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             +A  H     Q+L    ++L   ++ + +    ++ Y  RG++L  L + + A+ +   
Sbjct: 3039 ADACFHQGNALQELKRYNESLASYEKAIALKSVNAEVYAHRGVVLQKLSRFEDAVLNYKQ 3098

Query: 611  GLGIDPSNIECLYLRASCYHAI 632
             L + P   +  +L   C HAI
Sbjct: 3099 ALLLKP---DYDFLPGLCLHAI 3117



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/179 (22%), Positives = 83/179 (46%)

Query: 473 SKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGE 532
           ++ L F+P   ++L     +  + K    AV      + +  ++  +    G+AL  +  
Sbjct: 821 TEILRFKPGYFEVLQLSATIALQRKASEKAVALFDQALAIKPDHARSLNNRGIALQELKC 880

Query: 533 YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
           Y++A  ++ KAI ++  +  A+ +     Q+L   E A+E   + + ++   + AY  RG
Sbjct: 881 YEEALGSYEKAIAINPEYAMAYSNRGNTLQELKRYEDAVESYDRAIALNPYSATAYSNRG 940

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           + L  L +++ A++     + + P   +  Y R+     +  Y EAI  Y+ AL L+ D
Sbjct: 941 VALLKLVRYEDALESHDRAIVLKPDYADAYYNRSVVLEILMRYEEAIASYEKALLLKPD 999



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 5/185 (2%)

Query: 375 KSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K+ +I+ DF     +R +   +  +Y  A++ +D+ +   P Y EA   RG      +  
Sbjct: 142 KAIAINPDFAEAYYNRAVIFYDSDRYEEALASYDRAIVLKPDYVEAYANRGNVYLKLKRY 201

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E A+  + +AI       EA+   G A   L    EA+    KA+  + +  +    RG+
Sbjct: 202 EDALGSYKKAIALKLECDEAYYNMGNALLELQRYEEALASYEKAIALKVDYFEAYSNRGV 261

Query: 492 VNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRN 549
           V    + +  A+      + L   +  AY    L L  +  Y+ A  +  KA+ L  D +
Sbjct: 262 VLLVLRRYEDALVSYEKAIALKPHHAEAYANQCLVLHEMERYEDALVSCEKALSLKPDYD 321

Query: 550 FLEAW 554
           FL  W
Sbjct: 322 FLSGW 326



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 79/178 (44%)

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
           TE ++  P   E  +           S +A+    +AL  +P+ A  L+ RGI   + K 
Sbjct: 821 TEILRFKPGYFEVLQLSATIALQRKASEKAVALFDQALAIKPDHARSLNNRGIALQELKC 880

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  A+      + ++ E   AY+  G  L  +  Y+ A E++ +AI L+     A+ +  
Sbjct: 881 YEEALGSYEKAIAINPEYAMAYSNRGNTLQELKRYEDAVESYDRAIALNPYSATAYSNRG 940

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
                L   E ALE   + + +   ++ AY+ R ++L  L ++++AI      L + P
Sbjct: 941 VALLKLVRYEDALESHDRAIVLKPDYADAYYNRSVVLEILMRYEEAIASYEKALLLKP 998



 Score = 47.4 bits (111), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 5/135 (3%)

Query: 542  KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
            +A+++D +   +W  L     +L   E+AL   ++ + +   F + Y  RG     L ++
Sbjct: 2283 RALEIDPDHPVSWCTLGIALHELGRYEEALASYEKAIVLYPGFVEVYSNRGNTFLILKRY 2342

Query: 602  KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF----- 656
            ++A+      L I+P      + R S    +  Y EA+ DYD    L+ D +  +     
Sbjct: 2343 QEALSSYEKALAINPEYTRAYFNRGSALLELKRYEEALADYDKVTALKPDYIVAYINCAV 2402

Query: 657  VLQCLAFYQKEIALY 671
            VLQ L  Y++ I  Y
Sbjct: 2403 VLQELKRYREAIGSY 2417



 Score = 46.6 bits (109), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 3/159 (1%)

Query: 396  KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
            +Y  A++ +D  +   P   +    R       +  E A+ ++   +   P   EA+  R
Sbjct: 1593 RYEEALACYDSAIALKPENEQFYYHRAVVLHNMKRYEEALLNYDHVLALKPDCAEAYSNR 1652

Query: 456  GQARAALGESVEAIQDLSKALEFEPNSADILH-ERGIVNFKFKDFNAAVEDLSACVKLDK 514
            G     L    EA+    + +  +P++  + +  RG+V  +   +  A       ++ + 
Sbjct: 1653 GNILTGLKRYEEALASYDQVIALKPDNNLVAYSNRGVVLLELGRYRDAFLSFENTIEQNS 1712

Query: 515  ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFL 551
            ++  AY + GLAL  +  Y++A  ++ KA+ L  D +FL
Sbjct: 1713 DSADAYCHRGLALRKLKRYEEAIGSYEKALTLKPDYDFL 1751


>gi|440684247|ref|YP_007159042.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
 gi|428681366|gb|AFZ60132.1| Tetratricopeptide TPR_2 repeat-containing protein [Anabaena
           cylindrica PCC 7122]
          Length = 422

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 133/315 (42%), Gaps = 38/315 (12%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +  +  YA AI  F+ ++++DP +    + RG A      +  A+SD+TEAI+ +
Sbjct: 7   NRGLEKAQQKDYAGAIEDFNLVIQDDPYFSSVYVKRGLAYYDSGIILQAVSDYTEAIKLD 66

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   EA+  R  AR  L     +++D+ KA++   N A     RGIV  K  +   A+ +
Sbjct: 67  PKNVEAYYCRALARLTLKNLPGSLEDVEKAIQLNLNYAAAYDLRGIVQRKQGNIQNAIAN 126

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYK-----------------------------KA 536
                +L  E K A     L L  I + +                             KA
Sbjct: 127 FKKAAELYLEQKDAKN-CRLCLEKIKQLQPKPQPVTNPANSKPAPIISTKDYFTQLLEKA 185

Query: 537 EEAHLKAIQLDRNFL--------EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           E    +    D N++        +A+      Y  + N  +A+    Q L ++ + +  Y
Sbjct: 186 EHGDTREAIADLNWILKADSQDAQAYCCRGVVYCKIGNYREAIADFNQALQLNFQNAVVY 245

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
             RG     LG H+ A+ D++  L + P +      R + Y ++G Y  AI+DY  AL +
Sbjct: 246 RNRGKARSQLGDHQGALADMNQALKLQPEDGLGYVARGNIYRSMGNYLGAIQDYAQALKI 305

Query: 649 ELDSMEKFVLQCLAF 663
             +    +  + LA+
Sbjct: 306 NPNDALSYYNRGLAY 320



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 36/297 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG+A  + G    A+S + + +K DP   EA   R  AR   + L  ++ D  +AIQ 
Sbjct: 40  VKRGLAYYDSGIILQAVSDYTEAIKLDPKNVEAYYCRALARLTLKNLPGSLEDVEKAIQL 99

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALE--------------------FEPNSAD 484
           N +   A+  RG  +   G    AI +  KA E                     +P    
Sbjct: 100 NLNYAAAYDLRGIVQRKQGNIQNAIANFKKAAELYLEQKDAKNCRLCLEKIKQLQPKPQP 159

Query: 485 ILHERG-----IVNFK-----------FKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           + +        I++ K             D   A+ DL+  +K D ++  AY   G+   
Sbjct: 160 VTNPANSKPAPIISTKDYFTQLLEKAEHGDTREAIADLNWILKADSQDAQAYCCRGVVYC 219

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            IG Y++A     +A+QL+      + +  +    L + + AL  + Q L +       Y
Sbjct: 220 KIGNYREAIADFNQALQLNFQNAVVYRNRGKARSQLGDHQGALADMNQALKLQPEDGLGY 279

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAA 645
             RG +   +G +  AI+D +  L I+P++    Y R   Y  + E + A+ DY  A
Sbjct: 280 VARGNIYRSMGNYLGAIQDYAQALKINPNDALSYYNRGLAYTFLEEMQNAVADYQKA 336



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 108/237 (45%), Gaps = 16/237 (6%)

Query: 370 VTRISKSKS---ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           VT  + SK    IS     ++ + +   G    AI+  + ILK D    +A   RG    
Sbjct: 160 VTNPANSKPAPIISTKDYFTQLLEKAEHGDTREAIADLNWILKADSQDAQAYCCRGVVYC 219

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
                  AI+DF +A+Q N      ++ RG+AR+ LG+   A+ D+++AL+ +P      
Sbjct: 220 KIGNYREAIADFNQALQLNFQNAVVYRNRGKARSQLGDHQGALADMNQALKLQPEDGLGY 279

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
             RG +     ++  A++D +  +K++  +  +Y   GLA + + E + A   + KA  +
Sbjct: 280 VARGNIYRSMGNYLGAIQDYAQALKINPNDALSYYNRGLAYTFLEEMQNAVADYQKAASI 339

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH--LRGLLLHGLGQH 601
              + E         +D  N ++ L  LQ++       +KA +  LR  LL  +G +
Sbjct: 340 ---YCEQ--------EDWENYQQVLNSLQKIKSFIPETNKATYNLLRQRLLRMVGGY 385



 Score = 47.4 bits (111), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%)

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            + RG+   + KD+  A+ED +  ++ D    S Y   GLA    G   +A   + +AI+
Sbjct: 5   FYNRGLEKAQQKDYAGAIEDFNLVIQDDPYFSSVYVKRGLAYYDSGIILQAVSDYTEAIK 64

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           LD   +EA+         L N   +LE +++ + ++  ++ AY LRG++    G  + AI
Sbjct: 65  LDPKNVEAYYCRALARLTLKNLPGSLEDVEKAIQLNLNYAAAYDLRGIVQRKQGNIQNAI 124

Query: 606 KDL 608
            + 
Sbjct: 125 ANF 127


>gi|434381646|ref|YP_006703429.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
 gi|404430295|emb|CCG56341.1| TPR domain-containing protein [Brachyspira pilosicoli WesB]
          Length = 681

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 129/273 (47%), Gaps = 31/273 (11%)

Query: 392 VNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEA 451
           +++ +Y  A+   +++LKE+    E     G   +  ++ + +I  + + I+ NP   +A
Sbjct: 13  IDKKQYDEALRFSEELLKENDKDAEIYYYIGNIYSSSKKYDKSIEYYDKTIKLNPKHKKA 72

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           +  R  ++  +G+  EA++D+ KALE                      N   EDL     
Sbjct: 73  YNNRALSKNDIGKYYEALEDIKKALEL---------------------NTVKEDLYIY-- 109

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
                   Y  LGL  S+IGE+ +A +   +AI+L+  +   + +    Y  L   ++A+
Sbjct: 110 --------YDNLGLIKSNIGEHDEAIKYFNRAIELNNKYDNVYNNRGCTYFILEKYDEAV 161

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           +   + + ++ +F   Y  RG+  + L Q+ KAIKD S  + ID +  E    R      
Sbjct: 162 KDFTKAIKLNNKFKWPYLNRGVTKNKLRQYNKAIKDFSKLIEIDSNYQEAYLNRGVSKFF 221

Query: 632 IGEYREAIKDYDAALDLELDSMEKFVLQCLAFY 664
           + +Y +AI D++ A+D++++  E +  + L++Y
Sbjct: 222 LEKYNDAIDDFNKAIDIDIEYEEAYYYKALSYY 254



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 76/149 (51%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+ + N G++  AI  F++ ++ +  Y      RG       + + A+ DFT+AI+ N  
Sbjct: 114 GLIKSNIGEHDEAIKYFNRAIELNNKYDNVYNNRGCTYFILEKYDEAVKDFTKAIKLNNK 173

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
               +  RG  +  L +  +AI+D SK +E + N  +    RG+  F  + +N A++D +
Sbjct: 174 FKWPYLNRGVTKNKLRQYNKAIKDFSKLIEIDSNYQEAYLNRGVSKFFLEKYNDAIDDFN 233

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             + +D E + AY Y  L+  ++  Y+++
Sbjct: 234 KAIDIDIEYEEAYYYKALSYYALDNYRES 262



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 46/89 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG+ +    +Y  AI  F ++++ D  Y EA + RG ++ F  +   AI DF +AI  
Sbjct: 179 LNRGVTKNKLRQYNKAIKDFSKLIEIDSNYQEAYLNRGVSKFFLEKYNDAIDDFNKAIDI 238

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLS 473
           +    EA+  +  +  AL    E++ + S
Sbjct: 239 DIEYEEAYYYKALSYYALDNYRESLYNFS 267



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 28/128 (21%), Positives = 62/128 (48%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG       KY  A+  F + +K +  +    + RG  +   R+   AI DF++ I+ +
Sbjct: 146 NRGCTYFILEKYDEAVKDFTKAIKLNNKFKWPYLNRGVTKNKLRQYNKAIKDFSKLIEID 205

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  EA+  RG ++  L +  +AI D +KA++ +    +  + + +  +   ++  ++ +
Sbjct: 206 SNYQEAYLNRGVSKFFLEKYNDAIDDFNKAIDIDIEYEEAYYYKALSYYALDNYRESLYN 265

Query: 506 LSACVKLD 513
            S   KL+
Sbjct: 266 FSVLSKLN 273


>gi|306838683|ref|ZP_07471519.1| TPR domain-containing protein [Brucella sp. NF 2653]
 gi|306406326|gb|EFM62569.1| TPR domain-containing protein [Brucella sp. NF 2653]
          Length = 283

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A    G   EA++D  +A+   PN       R +V+ 
Sbjct: 54  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G                              
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------------------------------ 143

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                 Y+     ++AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 144 ----NVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 199

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G++  A  D++ A+ L+ +  E +  Q L +
Sbjct: 200 NSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQNVAESWANQALVY 248



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 89/201 (44%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A    G+Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 74  RGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 133

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ + ++A+          H RG++         A+ED 
Sbjct: 134 QYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 193

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G++  A +    AI LD+N  E+W +    Y+   +
Sbjct: 194 SKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 253

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 254 KAKAANSYARAVQLDPKYKPA 274



 Score = 74.3 bits (181), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A+++F +AI   
Sbjct: 107 NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNNFNQAIALR 166

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      DF+ A +D
Sbjct: 167 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNAFDD 226

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ +A+QLD  +  A
Sbjct: 227 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPA 274



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/216 (24%), Positives = 98/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A       + A+ DF +AI  NP+  +A+  R     
Sbjct: 54  ISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDR 113

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ + +  + L   +  AY
Sbjct: 114 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGRLDQALNNFNQAIALRTTDGRAY 173

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 174 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNAFDDFNTAITL 233

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 234 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 269


>gi|427735315|ref|YP_007054859.1| hypothetical protein Riv7116_1767 [Rivularia sp. PCC 7116]
 gi|427370356|gb|AFY54312.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
          Length = 225

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 51/172 (29%), Positives = 90/172 (52%)

Query: 377 KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
           K I++  + ++G+ Q+ +G +  AI  FD +++ +P + E    RG A++      AA++
Sbjct: 34  KQINLQQQFNQGVQQLKQGNFQEAIEDFDNVVQTNPRFYEGFCLRGLAKSQLGNYRAAVT 93

Query: 437 DFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKF 496
           DF +AI+ NP+  +A+  RG   A LG +  AI D  K ++ +P   D  +  G+ N++ 
Sbjct: 94  DFNQAIRLNPNHADAYHSRGNVYAILGNNPSAIADFKKTIKIDPKFTDAYYSLGLTNYRQ 153

Query: 497 KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
                A+ +L+  +KL+     AY   GLA  ++G  + A     KA  L R
Sbjct: 154 GHHKQAITNLNKALKLNPNLAEAYGNRGLAEYALGNKRSAVADLQKAASLFR 205



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/149 (32%), Positives = 74/149 (49%)

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
           Q   + AI DF   +Q+NP   E +  RG A++ LG    A+ D ++A+   PN AD  H
Sbjct: 51  QGNFQEAIEDFDNVVQTNPRFYEGFCLRGLAKSQLGNYRAAVTDFNQAIRLNPNHADAYH 110

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            RG V     +  +A+ D    +K+D +   AY  LGL     G +K+A     KA++L+
Sbjct: 111 SRGNVYAILGNNPSAIADFKKTIKIDPKFTDAYYSLGLTNYRQGHHKQAITNLNKALKLN 170

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQ 576
            N  EA+G+       L N   A+  LQ+
Sbjct: 171 PNLAEAYGNRGLAEYALGNKRSAVADLQK 199



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 46/155 (29%), Positives = 76/155 (49%)

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            K  +F  A+ED    V+ +      +   GLA S +G Y+ A     +AI+L+ N  +A
Sbjct: 49  LKQGNFQEAIEDFDNVVQTNPRFYEGFCLRGLAKSQLGNYRAAVTDFNQAIRLNPNHADA 108

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLG 613
           +      Y  L N+  A+   ++ + ID +F+ AY+  GL  +  G HK+AI +L+  L 
Sbjct: 109 YHSRGNVYAILGNNPSAIADFKKTIKIDPKFTDAYYSLGLTNYRQGHHKQAITNLNKALK 168

Query: 614 IDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           ++P+  E    R    +A+G  R A+ D   A  L
Sbjct: 169 LNPNLAEAYGNRGLAEYALGNKRSAVADLQKAASL 203



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 68/136 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A+   G Y +A++ F+Q ++ +P + +A   RG   A      +AI+DF + I+ +P
Sbjct: 78  RGLAKSQLGNYRAAVTDFNQAIRLNPNHADAYHSRGNVYAILGNNPSAIADFKKTIKIDP 137

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +A+   G      G   +AI +L+KAL+  PN A+    RG+  +   +  +AV DL
Sbjct: 138 KFTDAYYSLGLTNYRQGHHKQAITNLNKALKLNPNLAEAYGNRGLAEYALGNKRSAVADL 197

Query: 507 SACVKLDKENKSAYTY 522
                L ++      Y
Sbjct: 198 QKAASLFRQEGDNQNY 213



 Score = 47.8 bits (112), Expect = 0.033,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 58/134 (43%)

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G +++A E     +Q +  F E +         L N   A+    Q + ++   + AYH 
Sbjct: 52  GNFQEAIEDFDNVVQTNPRFYEGFCLRGLAKSQLGNYRAAVTDFNQAIRLNPNHADAYHS 111

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RG +   LG +  AI D    + IDP   +  Y      +  G +++AI + + AL L  
Sbjct: 112 RGNVYAILGNNPSAIADFKKTIKIDPKFTDAYYSLGLTNYRQGHHKQAITNLNKALKLNP 171

Query: 651 DSMEKFVLQCLAFY 664
           +  E +  + LA Y
Sbjct: 172 NLAEAYGNRGLAEY 185


>gi|300786250|ref|YP_003766541.1| hypothetical protein AMED_4366 [Amycolatopsis mediterranei U32]
 gi|384149568|ref|YP_005532384.1| hypothetical protein RAM_22235 [Amycolatopsis mediterranei S699]
 gi|399538133|ref|YP_006550795.1| hypothetical protein AMES_4314 [Amycolatopsis mediterranei S699]
 gi|299795764|gb|ADJ46139.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
 gi|340527722|gb|AEK42927.1| hypothetical protein RAM_22235 [Amycolatopsis mediterranei S699]
 gi|398318903|gb|AFO77850.1| hypothetical protein AMES_4314 [Amycolatopsis mediterranei S699]
          Length = 1052

 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 135/316 (42%), Gaps = 9/316 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQS 444
           SRGIA    G+   +++  D+    DP     +  RG T +A QR  E A++DF  A++ 
Sbjct: 569 SRGIAYRVLGELEKSLADLDRAAGLDPDSAWTIGARGETLQAMQRN-EEALADFDRALEL 627

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   +    RGQA  AL    EA+   ++ALE EP+   +L  RG V+   + + +A+ 
Sbjct: 628 EPDRADMHAARGQALYALDRYPEALATFTRALEIEPDDTWLLGWRGRVHRWQESYASALA 687

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +  ++L+ +   A    G     +G +++A     +A+++D  +  A+      Y D+
Sbjct: 688 DATRVLELEPDADWALDERGETHRLMGHHEEALADLTRAVEIDPQYAGAFARRGAAYADM 747

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
               +AL    + L I          R L     G H  A+ D +  L I+P        
Sbjct: 748 GRWAEALADYDRSLEIQPSSVLTLGRRALAHRDSGNHGLAMADFARALEINPEADWIFRD 807

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
           RA  +H  G   EA+ DYD  ++L+ +          A  Q+ + L    ++        
Sbjct: 808 RAQTHHLAGRLAEALADYDRTIELDPE-------YSWAVRQRALVLRDLGRLEEALTSLT 860

Query: 685 IDGDIDPLFKEYWCKR 700
              + DP     WC R
Sbjct: 861 RLAEADPATAWRWCDR 876



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 125/276 (45%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG     +  YASA++   ++L+ +P    AL  RG         E A++D T A++ +P
Sbjct: 672 RGRVHRWQESYASALADATRVLELEPDADWALDERGETHRLMGHHEEALADLTRAVEIDP 731

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+ RRG A A +G   EA+ D  ++LE +P+S   L  R + +    +   A+ D 
Sbjct: 732 QYAGAFARRGAAYADMGRWAEALADYDRSLEIQPSSVLTLGRRALAHRDSGNHGLAMADF 791

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  ++++ E    +          G   +A   + + I+LD  +  A        +DL  
Sbjct: 792 ARALEINPEADWIFRDRAQTHHLAGRLAEALADYDRTIELDPEYSWAVRQRALVLRDLGR 851

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
            E+AL  L ++   D   +  +  RG +LH LG+ ++A+ D +  + IDP        R 
Sbjct: 852 LEEALTSLTRLAEADPATAWRWCDRGAILHRLGRFEEAVADFTRAIEIDPDQGLAFSQRG 911

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
             +   G   EA  D + +  L+ ++ + + L  LA
Sbjct: 912 QIHRRCGRLAEARADLERSAQLDAEAWDHYQLGLLA 947



 Score = 54.7 bits (130), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 2/216 (0%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G++A A++ +D+ L+  P     L  R  A         A++DF  A++ NP A   ++ 
Sbjct: 748 GRWAEALADYDRSLEIQPSSVLTLGRRALAHRDSGNHGLAMADFARALEINPEADWIFRD 807

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R Q     G   EA+ D  + +E +P  +  + +R +V         A+  L+   + D 
Sbjct: 808 RAQTHHLAGRLAEALADYDRTIELDPEYSWAVRQRALVLRDLGRLEEALTSLTRLAEADP 867

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
                +   G  L  +G +++A     +AI++D +   A+    Q ++      +A   L
Sbjct: 868 ATAWRWCDRGAILHRLGRFEEAVADFTRAIEIDPDQGLAFSQRGQIHRRCGRLAEARADL 927

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
           ++   +D      Y L GLL H  G+   A KDL S
Sbjct: 928 ERSAQLDAEAWDHYQL-GLLAHVEGR-PDAAKDLFS 961



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 38/231 (16%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD-------------- 513
           A++ L++ALE++P+    L  RGI      +   ++ DL     LD              
Sbjct: 549 AVEALTRALEYDPDDGWALPSRGIAYRVLGELEKSLADLDRAAGLDPDSAWTIGARGETL 608

Query: 514 ---KENKSA-----------------YTYLGLALSSIGEYKKAEEAHLKAIQL--DRNFL 551
              + N+ A                 +   G AL ++  Y +A     +A+++  D  +L
Sbjct: 609 QAMQRNEEALADFDRALELEPDRADMHAARGQALYALDRYPEALATFTRALEIEPDDTWL 668

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
             W      +Q+  +   AL    +VL ++     A   RG     +G H++A+ DL+  
Sbjct: 669 LGWRGRVHRWQE--SYASALADATRVLELEPDADWALDERGETHRLMGHHEEALADLTRA 726

Query: 612 LGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLA 662
           + IDP        R + Y  +G + EA+ DYD +L+++  S+     + LA
Sbjct: 727 VEIDPQYAGAFARRGAAYADMGRWAEALADYDRSLEIQPSSVLTLGRRALA 777



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 8/185 (4%)

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           A+ D+++   FE + A  L      + +  DF AAVE L+  ++ D ++  A    G+A 
Sbjct: 523 ALPDMAR---FEAHQALALE-----HVRKDDFAAAVEALTRALEYDPDDGWALPSRGIAY 574

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             +GE +K+     +A  LD +     G   +  Q +  +E+AL    + L ++   +  
Sbjct: 575 RVLGELEKSLADLDRAAGLDPDSAWTIGARGETLQAMQRNEEALADFDRALELEPDRADM 634

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           +  RG  L+ L ++ +A+   +  L I+P +   L  R   +     Y  A+ D    L+
Sbjct: 635 HAARGQALYALDRYPEALATFTRALEIEPDDTWLLGWRGRVHRWQESYASALADATRVLE 694

Query: 648 LELDS 652
           LE D+
Sbjct: 695 LEPDA 699



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 6/120 (5%)

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A+E L + L  D     A   RG+    LG+ +K++ DL    G+DP +   +  R    
Sbjct: 549 AVEALTRALEYDPDDGWALPSRGIAYRVLGELEKSLADLDRAAGLDPDSAWTIGARGETL 608

Query: 630 HAIGEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYT-ASKINSEFCWF 683
            A+    EA+ D+D AL+LE D  +        L  L  Y + +A +T A +I  +  W 
Sbjct: 609 QAMQRNEEALADFDRALELEPDRADMHAARGQALYALDRYPEALATFTRALEIEPDDTWL 668


>gi|148656866|ref|YP_001277071.1| hypothetical protein RoseRS_2749 [Roseiflexus sp. RS-1]
 gi|148568976|gb|ABQ91121.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
          Length = 615

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 12/246 (4%)

Query: 438 FTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK 497
           +TEAI+++PS+ EA+  R Q    L     AI D +KAL  +P++ +  H+R    ++  
Sbjct: 350 YTEAIRADPSSFEAYFGRAQVNFNLSLFQSAIDDFTKALALDPDNVEAYHQRARAFYRLN 409

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
            ++AA+ D +  ++ D  N       G+A     +Y +A     +++QL+ +    + H 
Sbjct: 410 QYDAAIRDFTEALERDPNNDVILMRRGVAYRDNRQYDEALADFDQSLQLNPDVSFTYYHR 469

Query: 558 TQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPS 617
              +Q     ++A     + L I   +  A+  RGLL       + A+ D S  + ID +
Sbjct: 470 ALLFQATGKLDRARADFDRALTIAPEYRLAFVGRGLLRLEQRDARGALSDCSRAIEIDAT 529

Query: 618 NIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF------------VLQCLAFYQ 665
            I+    RA    A+ +YR AI D D  +  + D+ + +            V +  A YQ
Sbjct: 530 EIDAYLCRARAAVALRDYRTAIADLDVVIARDPDNADAYRERGRAHQALRDVARARADYQ 589

Query: 666 KEIALY 671
           +   LY
Sbjct: 590 RAAELY 595



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 112/254 (44%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G    A   + + ++ DP   EA  GR          ++AI DFT+A+  +P   EA+ +
Sbjct: 341 GSLGQAAERYTEAIRADPSSFEAYFGRAQVNFNLSLFQSAIDDFTKALALDPDNVEAYHQ 400

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           R +A   L +   AI+D ++ALE +PN+  IL  RG+     + ++ A+ D    ++L+ 
Sbjct: 401 RARAFYRLNQYDAAIRDFTEALERDPNNDVILMRRGVAYRDNRQYDEALADFDQSLQLNP 460

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +    Y +  L   + G+  +A     +A+ +   +  A+        +  ++  AL   
Sbjct: 461 DVSFTYYHRALLFQATGKLDRARADFDRALTIAPEYRLAFVGRGLLRLEQRDARGALSDC 520

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + + ID     AY  R      L  ++ AI DL   +  DP N +    R   + A+ +
Sbjct: 521 SRAIEIDATEIDAYLCRARAAVALRDYRTAIADLDVVIARDPDNADAYRERGRAHQALRD 580

Query: 635 YREAIKDYDAALDL 648
              A  DY  A +L
Sbjct: 581 VARARADYQRAAEL 594



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 18/196 (9%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDP-----MYPEALIGRGTARAFQRELEAAISDFT 439
           + RG+A  +  +Y  A++ FDQ L+ +P      Y  AL+ + T +     L+ A +DF 
Sbjct: 433 MRRGVAYRDNRQYDEALADFDQSLQLNPDVSFTYYHRALLFQATGK-----LDRARADFD 487

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
            A+   P    A+  RG  R    ++  A+ D S+A+E +    D    R       +D+
Sbjct: 488 RALTIAPEYRLAFVGRGLLRLEQRDARGALSDCSRAIEIDATEIDAYLCRARAAVALRDY 547

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+ DL   +  D +N  AY   G A  ++ +  +A   + +A +L R        +  
Sbjct: 548 RTAIADLDVVIARDPDNADAYRERGRAHQALRDVARARADYQRAAELYR--------IQG 599

Query: 560 FYQDLANSEKALECLQ 575
             +DLA  EK L  L+
Sbjct: 600 RTEDLAEVEKLLAALR 615


>gi|440753799|ref|ZP_20933001.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
 gi|440174005|gb|ELP53374.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
          Length = 717

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 129/263 (49%), Gaps = 1/263 (0%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP-SAGEAWKR 454
           +Y  A++ + Q LK +P Y EAL G+  A    +    A++ + +AIQ NP SA +AW  
Sbjct: 357 RYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDSAWQAWLG 416

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG+A   L ++ EA++   + L   P ++     +  +  + + ++AA + L   +   +
Sbjct: 417 RGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQ 476

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
            +   +   G +L ++ +Y+ A +A+ +A+ ++ +    W         L     ALE  
Sbjct: 477 NDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESY 536

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            +    + +FS+A++ +G++L  LG++ +A++  +     + +  +    + +  H +  
Sbjct: 537 SKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLER 596

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
           ++EAI  Y+ A  +     E F+
Sbjct: 597 FQEAIASYEKARRISSRKSEVFI 619



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 126/263 (47%), Gaps = 7/263 (2%)

Query: 396 KYASAISIFDQILKEDPMYP-EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           +Y+ A++ +++ ++ +P    +A +GRG A     + + A+  F   +  NP+A +AW+ 
Sbjct: 391 RYSEALNTYEKAIQINPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQG 450

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +      L +   A + L K L F+ N A I +++G      +D+  AV+     + ++ 
Sbjct: 451 KADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIES 510

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ--FYQDLANSEKALE 572
           +N   +   G +L  + +   A E++ KA Q +  F +A  H +Q    Q L  + +ALE
Sbjct: 511 DNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQA--HYSQGIILQKLGRNSEALE 568

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY-LRASCYHA 631
              Q    +  + +A+  +G LLH L + ++AI        I     E    +  +CY  
Sbjct: 569 AFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNACYR- 627

Query: 632 IGEYREAIKDYDAALDLELDSME 654
           +G+Y +AI  Y  A+  + D+ E
Sbjct: 628 LGDYSQAITAYQQAIQRQKDNPE 650



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 8/210 (3%)

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +++G   ++ K +  A+      +K++ +   A      AL ++  Y +A   + KAIQ+
Sbjct: 346 YQQGQTFYQLKRYTDALNSYGQALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQI 405

Query: 547 DRN-FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           + +   +AW    +    L  +++ALE  ++VL ++   S+A+  +  +   L Q+  A 
Sbjct: 406 NPDSAWQAWLGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQ 465

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           K L   L    ++ +  Y +      + +Y  A+K YD AL +E D+        L +YQ
Sbjct: 466 KALDKLLTFQQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDN-------ALIWYQ 518

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKE 695
           K  +LY  +KIN+    +   G  +P F +
Sbjct: 519 KGNSLYQLNKINNALESYSKAGQFNPQFSQ 548



 Score = 48.9 bits (115), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 79/182 (43%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A+  +DQ L  +         +G +     ++  A+  +++A Q NP   +A   +G
Sbjct: 495 YEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQFSQAHYSQG 554

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                LG + EA++  ++A +   N       +G +  + + F  A+       ++    
Sbjct: 555 IILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRK 614

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
              +  +G A   +G+Y +A  A+ +AIQ  ++  E W  L   +  L   E+A++  Q+
Sbjct: 615 SEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQE 674

Query: 577 VL 578
            L
Sbjct: 675 SL 676



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 54/262 (20%), Positives = 106/262 (40%), Gaps = 34/262 (12%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG A     K   A+  F+++L  +P   +A  G+       ++  AA     + +  
Sbjct: 415 LGRGEALDKLDKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTF 474

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
             +  + W ++G +   L +   A++   +AL  E ++A I +++G   ++    N A+E
Sbjct: 475 QQNDAKIWYKKGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALE 534

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW-------GHL 557
             S   + + +   A+   G+ L  +G   +A EA  +A + + N+ +AW         L
Sbjct: 535 SYSKAGQFNPQFSQAHYSQGIILQKLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQL 594

Query: 558 TQFYQDLANSEKA---------------------------LECLQQVLYIDKRFSKAYHL 590
            +F + +A+ EKA                           +   QQ +   K   + +  
Sbjct: 595 ERFQEAIASYEKARRISSRKSEVFIGIGNACYRLGDYSQAITAYQQAIQRQKDNPETWKS 654

Query: 591 RGLLLHGLGQHKKAIKDLSSGL 612
            G     LGQ+++AI+     L
Sbjct: 655 LGNSWFKLGQYERAIQAYQESL 676



 Score = 42.7 bits (99), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 56/116 (48%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           A+  FT+A ++N +  +AW  +G     L    EAI    KA       +++    G   
Sbjct: 566 ALEAFTQATKANSNYYQAWLNQGALLHQLERFQEAIASYEKARRISSRKSEVFIGIGNAC 625

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           ++  D++ A+      ++  K+N   +  LG +   +G+Y++A +A+ ++++   N
Sbjct: 626 YRLGDYSQAITAYQQAIQRQKDNPETWKSLGNSWFKLGQYERAIQAYQESLRYRSN 681


>gi|333988324|ref|YP_004520931.1| hypothetical protein MSWAN_2122 [Methanobacterium sp. SWAN-1]
 gi|333826468|gb|AEG19130.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
           sp. SWAN-1]
          Length = 584

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 121/267 (45%), Gaps = 7/267 (2%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A+ +F++++  DP    A  G+          E A+    +     P  G AW  +    
Sbjct: 27  ALKLFNRVISSDPKNYRAWKGKSDVYQKMERYEDALKCLDKLTDFYPENGRAWHSKAYTY 86

Query: 460 AALGESVEAIQDLSKALEF-------EPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
             LG   +      KAL+F        P+++  L+ + ++ + F+ +  ++E     +K 
Sbjct: 87  QLLGNDEDKDVCYKKALKFYGRDLVKNPHNSVELYNKALILYIFEKYEESLEFFDKSIKE 146

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
           D +   ++ Y G AL+S+  Y +A +   +A++LD   ++ W       Q L     A+ 
Sbjct: 147 DPKYAHSWQYKGFALNSLERYVEALKCFDEALKLDAEDVDTWIGKGYALQSLKKYNLAMA 206

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
           C  + L     + KAY+ +G LL  L +H+KA++     + I+P +    YL+   +  +
Sbjct: 207 CFNRALDFKSNYLKAYYNKGFLLRELKEHEKAVECFDKVIEIEPKSGFAWYLKGLSFDML 266

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQ 659
            +Y +A+  YD A+ ++    E  V++
Sbjct: 267 KKYHDALNAYDEAIKIDPKDPEFLVVK 293



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/353 (21%), Positives = 151/353 (42%), Gaps = 26/353 (7%)

Query: 292 SVNERHGRQTNGTHDVHDKLS------------SDSASLNDSNTNSESYSKSSISDNKSS 339
           S + ++ R   G  DV+ K+             +D    N    +S++Y+   + +++  
Sbjct: 36  SSDPKNYRAWKGKSDVYQKMERYEDALKCLDKLTDFYPENGRAWHSKAYTYQLLGNDEDK 95

Query: 340 DSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISKS---------KSISVDFRLS---- 386
           D    ++   +  D++K   N  +   K  +  I +          KSI  D + +    
Sbjct: 96  DVCYKKALKFYGRDLVKNPHNSVELYNKALILYIFEKYEESLEFFDKSIKEDPKYAHSWQ 155

Query: 387 -RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
            +G A  +  +Y  A+  FD+ LK D    +  IG+G A    ++   A++ F  A+   
Sbjct: 156 YKGFALNSLERYVEALKCFDEALKLDAEDVDTWIGKGYALQSLKKYNLAMACFNRALDFK 215

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +  +A+  +G     L E  +A++   K +E EP S    + +G+     K ++ A+  
Sbjct: 216 SNYLKAYYNKGFLLRELKEHEKAVECFDKVIEIEPKSGFAWYLKGLSFDMLKKYHDALNA 275

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               +K+D ++          L  + EY+ A +   K I+LD  +  A+      + +L 
Sbjct: 276 YDEAIKIDPKDPEFLVVKSWTLKHLKEYEDALKLLDKTIELDSGYYHAYVDKGLIFSELK 335

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
             EK++EC  + + + +  S  Y  +G +L  LG + +A+   +  L ++P N
Sbjct: 336 KYEKSIECFNKAIELKEDDSIIYRSKGDVLDKLGNYHEALNCFNKTLELEPEN 388



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 13/262 (4%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A+ + D+ ++ D  Y  A + +G   +  ++ E +I  F +AI+        ++ +G
Sbjct: 303 YEDALKLLDKTIELDSGYYHAYVDKGLIFSELKKYEKSIECFNKAIELKEDDSIIYRSKG 362

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIV----------NFKFKDFNAAVEDL 506
                LG   EA+   +K LE EP +    H + +            F FK    A+E  
Sbjct: 363 DVLDKLGNYHEALNCFNKTLELEPENGLNWHSKALTLEKMWKMDESKFYFK---RAIECY 419

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
            A +  D ENK        AL  +G+Y +A E   KA+++D ++  A     +    +  
Sbjct: 420 DAKLTKDPENKYTLANKASALEELGKYAEALEYVDKALEIDADYDWALNLKGEILLKMKQ 479

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +AL+ + + + ++    + Y+ +G +L  L Q+  A+K  +  + +DP     LY + 
Sbjct: 480 YHEALKYIDEAIQLETEDEEYYYNKGKVLCALKQYGGALKLFNKSIKLDPKCYRSLYAKG 539

Query: 627 SCYHAIGEYREAIKDYDAALDL 648
                +G   EA+K Y  AL +
Sbjct: 540 VVMEKMGNPEEALKCYKKALQI 561



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 140/352 (39%), Gaps = 46/352 (13%)

Query: 369 CVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
           C     K  +  VD  + +G A  +  KY  A++ F++ L     Y +A   +G      
Sbjct: 173 CFDEALKLDAEDVDTWIGKGYALQSLKKYNLAMACFNRALDFKSNYLKAYYNKGFLLREL 232

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           +E E A+  F + I+  P +G AW  +G +   L +  +A+    +A++ +P   + L  
Sbjct: 233 KEHEKAVECFDKVIEIEPKSGFAWYLKGLSFDMLKKYHDALNAYDEAIKIDPKDPEFLVV 292

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           +       K++  A++ L   ++LD     AY   GL  S + +Y+K+ E   KAI+L  
Sbjct: 293 KSWTLKHLKEYEDALKLLDKTIELDSGYYHAYVDKGLIFSELKKYEKSIECFNKAIELKE 352

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ-------H 601
           +    +         L N  +AL C  + L ++      +H + L L  + +        
Sbjct: 353 DDSIIYRSKGDVLDKLGNYHEALNCFNKTLELEPENGLNWHSKALTLEKMWKMDESKFYF 412

Query: 602 KKAIKDLSSGLGIDPSNIECLYLRASCYHAIG---------------------------- 633
           K+AI+   + L  DP N   L  +AS    +G                            
Sbjct: 413 KRAIECYDAKLTKDPENKYTLANKASALEELGKYAEALEYVDKALEIDADYDWALNLKGE 472

Query: 634 ------EYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTAS 674
                 +Y EA+K  D A+ LE +  E +     VL  L  Y   + L+  S
Sbjct: 473 ILLKMKQYHEALKYIDEAIQLETEDEEYYYNKGKVLCALKQYGGALKLFNKS 524



 Score = 62.8 bits (151), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 124/261 (47%), Gaps = 7/261 (2%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY  A++ +D+ +K DP  PE L+ +       +E E A+    + I+ +     A+  +
Sbjct: 268 KYHDALNAYDEAIKIDPKDPEFLVVKSWTLKHLKEYEDALKLLDKTIELDSGYYHAYVDK 327

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G   + L +  ++I+  +KA+E + + + I   +G V  K  +++ A+   +  ++L+ E
Sbjct: 328 GLIFSELKKYEKSIECFNKAIELKEDDSIIYRSKGDVLDKLGNYHEALNCFNKTLELEPE 387

Query: 516 NKSAYTYLGLALSSIGE-------YKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
           N   +    L L  + +       +K+A E +   +  D        +     ++L    
Sbjct: 388 NGLNWHSKALTLEKMWKMDESKFYFKRAIECYDAKLTKDPENKYTLANKASALEELGKYA 447

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +ALE + + L ID  +  A +L+G +L  + Q+ +A+K +   + ++  + E  Y +   
Sbjct: 448 EALEYVDKALEIDADYDWALNLKGEILLKMKQYHEALKYIDEAIQLETEDEEYYYNKGKV 507

Query: 629 YHAIGEYREAIKDYDAALDLE 649
             A+ +Y  A+K ++ ++ L+
Sbjct: 508 LCALKQYGGALKLFNKSIKLD 528



 Score = 40.0 bits (92), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 34/185 (18%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           +  AI  +D  L +DP     L  + +A      LE                        
Sbjct: 412 FKRAIECYDAKLTKDPENKYTLANKASA------LE------------------------ 441

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                LG+  EA++ + KALE + +    L+ +G +  K K ++ A++ +   ++L+ E+
Sbjct: 442 ----ELGKYAEALEYVDKALEIDADYDWALNLKGEILLKMKQYHEALKYIDEAIQLETED 497

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
           +  Y   G  L ++ +Y  A +   K+I+LD     +        + + N E+AL+C ++
Sbjct: 498 EEYYYNKGKVLCALKQYGGALKLFNKSIKLDPKCYRSLYAKGVVMEKMGNPEEALKCYKK 557

Query: 577 VLYID 581
            L I+
Sbjct: 558 ALQIN 562


>gi|329954515|ref|ZP_08295606.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
 gi|328527483|gb|EGF54480.1| tetratricopeptide repeat protein [Bacteroides clarus YIT 12056]
          Length = 681

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 113/257 (43%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKINLDDFQGAEADCDLAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D   AL+++P +  + H   + + + +DFN+A EDL   + +    
Sbjct: 98  LARIRQDKFDGAIEDYRTALKYDPENVVLWHNLSLCHMQKEDFNSAKEDLGKLLTIAPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +  +A +    AI +DR   + W          +  ++A   L Q
Sbjct: 158 TRAYLMRGEVNLKQNDTIQALKDFDTAIDMDRYDPDGWAARAIVRLQQSKYKEAENDLDQ 217

Query: 577 VLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYR 636
            +++  R S  Y  R L        + A+ D    L IDP+N    Y R      +G+  
Sbjct: 218 AIHLSARNSGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDN 277

Query: 637 EAIKDYDAALDLELDSM 653
            AI+D+D  L +E D+M
Sbjct: 278 RAIEDFDFVLKMEPDNM 294



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 8/265 (3%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           R +A++N   +  A +  D  ++ +P    A   RG AR  Q + + AI D+  A++ +P
Sbjct: 62  RALAKINLDDFQGAEADCDLAIQRNPFVVGAYQIRGLARIRQDKFDGAIEDYRTALKYDP 121

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
                W           +   A +DL K L   P        RG VN K  D   A++D 
Sbjct: 122 ENVVLWHNLSLCHMQKEDFNSAKEDLGKLLTIAPRYTRAYLMRGEVNLKQNDTIQALKDF 181

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR----NFLEAWGHLTQFYQ 562
              + +D+ +   +    +      +YK+AE    +AI L      N++     L +F+Q
Sbjct: 182 DTAIDMDRYDPDGWAARAIVRLQQSKYKEAENDLDQAIHLSARNSGNYINRA--LARFHQ 239

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +  N   A+      L ID      ++ RGLL   +G   +AI+D    L ++P N+   
Sbjct: 240 N--NLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMAA 297

Query: 623 YLRASCYHAIGEYREAIKDYDAALD 647
           + R       G+YR AI DY   +D
Sbjct: 298 FNRGLLRAQTGDYRGAISDYSKVID 322



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 3/174 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KY  A +  DQ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVRLQQSKYKEAENDLDQAIHLSARNSGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    L+ EP++      RG++  +  D+  A+ D
Sbjct: 257 PNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKMEPDNMMAAFNRGLLRAQTGDYRGAISD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA--IQLD-RNFLEAWGH 556
            S  +       + Y +   A   IG+ K AE+   K   +QLD RN +   G+
Sbjct: 317 YSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQDEFKVMKMQLDKRNGVTTGGN 370



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 6/268 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+A++ + K+  AI  +   LK DP               + +  +A  D  + +   P
Sbjct: 96  RGLARIRQDKFDGAIEDYRTALKYDPENVVLWHNLSLCHMQKEDFNSAKEDLGKLLTIAP 155

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG+      ++++A++D   A++ +    D    R IV  +   +  A  DL
Sbjct: 156 RYTRAYLMRGEVNLKQNDTIQALKDFDTAIDMDRYDPDGWAARAIVRLQQSKYKEAENDL 215

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD-RNFLEAWGHLTQ--FYQD 563
              + L   N   Y    LA       + A   +  A+ +D  NFL   GH  +      
Sbjct: 216 DQAIHLSARNSGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFL---GHYNRGLLRAQ 272

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
           + +  +A+E    VL ++     A   RGLL    G ++ AI D S  +   P+ +   Y
Sbjct: 273 VGDDNRAIEDFDFVLKMEPDNMMAAFNRGLLRAQTGDYRGAISDYSKVIDEYPNFMAGYY 332

Query: 624 LRASCYHAIGEYREAIKDYDAALDLELD 651
            RA     IG+ + A +D    + ++LD
Sbjct: 333 HRAEARKKIGDRKGAEQDEFKVMKMQLD 360



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 74/172 (43%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +     A+  FD  +  D   P+    R   R  Q + + A +D  +AI  
Sbjct: 162 LMRGEVNLKQNDTIQALKDFDTAIDMDRYDPDGWAARAIVRLQQSKYKEAENDLDQAIHL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SARNSGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH 556
           D    +K++ +N  A    GL  +  G+Y+ A   + K I    NF+  + H
Sbjct: 282 DFDFVLKMEPDNMMAAFNRGLLRAQTGDYRGAISDYSKVIDEYPNFMAGYYH 333



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 102/236 (43%), Gaps = 9/236 (3%)

Query: 458 ARAAL--GESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           AR AL   + V +IQ  ++ +  +P   +    R +      DF  A  D    ++ +  
Sbjct: 29  ARNALYFEDYVLSIQYFNQVINAKPYLYEPYFFRALAKINLDDFQGAEADCDLAIQRNPF 88

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY   GLA     ++  A E +  A++ D   +  W +L+  +    +   A E L 
Sbjct: 89  VVGAYQIRGLARIRQDKFDGAIEDYRTALKYDPENVVLWHNLSLCHMQKEDFNSAKEDLG 148

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           ++L I  R+++AY +RG +        +A+KD  + + +D  + +    RA       +Y
Sbjct: 149 KLLTIAPRYTRAYLMRGEVNLKQNDTIQALKDFDTAIDMDRYDPDGWAARAIVRLQQSKY 208

Query: 636 REAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
           +EA  D D A+ L   +   ++ + LA + +       + +      +D+  DIDP
Sbjct: 209 KEAENDLDQAIHLSARNSGNYINRALARFHQ-------NNLRGAMSDYDLALDIDP 257



 Score = 50.4 bits (119), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 11/103 (10%)

Query: 390 AQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAG 449
           A+V    Y    +  D +++  P +      RG   +  ++  AA++D+ +AI+ NP   
Sbjct: 576 AEVTAMDYDIVKNDLDHVIRLAPDFVYGYYNRGNVSSMLKDYRAALADYDKAIELNPDFA 635

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           EA+  RG     LG + + I DLSKA            ERGIV
Sbjct: 636 EAYFNRGLTHIFLGNNRQGISDLSKA-----------GERGIV 667



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   ++ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFLGHYNRGLLRAQVGDDNRAIEDFDFVLKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AI D SK ++  PN     + R     K  D   A +
Sbjct: 290 EPDNMMAAFNRGLLRAQTGDYRGAISDYSKVIDEYPNFMAGYYHRAEARKKIGDRKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  LDK N
Sbjct: 350 DEFKVMKMQLDKRN 363


>gi|148558498|ref|YP_001257882.1| hypothetical protein BOV_A0905 [Brucella ovis ATCC 25840]
 gi|148369783|gb|ABQ62655.1| TPR domain protein [Brucella ovis ATCC 25840]
          Length = 295

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           IS  T  IQSNP   E +  RG A        EA++D  +A+   PN       R +V+ 
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKARRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
              D N AV+D S  ++L+ +  +AY   G        Y++A                  
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRG------NVYRQA------------------ 161

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
           GHL Q          AL    Q + +     +AYH RGL+    G HK+AI+D S  + +
Sbjct: 162 GHLDQ----------ALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISL 211

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           + +  E    R   Y A+G+Y  A  D++ A+ L+ +  E +  Q L +
Sbjct: 212 NSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVY 260



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/201 (24%), Positives = 88/201 (43%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A     +Y  A+  FDQ +  +P + +A   R     +  +   A+ D++ AIQ NP
Sbjct: 86  RGSAYGKARRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNP 145

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  RG      G   +A+ D ++A+          H RG++         A+ED 
Sbjct: 146 QYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAYHNRGLIYQAKGLHKQAIEDF 205

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           S  + L+      Y   G++  ++G+Y  A +    AI LD+N  E+W +    Y+   +
Sbjct: 206 SKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITLDQNVAESWANQALVYEHNGD 265

Query: 567 SEKALECLQQVLYIDKRFSKA 587
             KA     + + +D ++  A
Sbjct: 266 KAKAANSYARAVQLDPKYKPA 286



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 99/216 (45%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           IS    +++ +P  PE    RG+A    R  + A+ DF +AI  NP+  +A+  R     
Sbjct: 66  ISSLTSVIQSNPRDPEGYNVRGSAYGKARRYKEAMRDFDQAIALNPNFYQAYANRALVDR 125

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G++ +A+QD S+A++  P        RG V  +    + A+ D +  + L   +  AY
Sbjct: 126 YMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALRTTDGRAY 185

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
              GL   + G +K+A E   KAI L+    E +      Y  L + + A +     + +
Sbjct: 186 HNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDDFNTAITL 245

Query: 581 DKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
           D+  ++++  + L+    G   KA    +  + +DP
Sbjct: 246 DQNVAESWANQALVYEHNGDKAKAANSYARAVQLDP 281



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 79/168 (47%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +     G    A+  + + ++ +P Y  A IGRG        L+ A++DF +AI   
Sbjct: 119 NRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAIALR 178

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            + G A+  RG    A G   +AI+D SKA+     + +  + RGI      D++ A +D
Sbjct: 179 TTDGRAYHNRGLIYQAKGLHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNAFDD 238

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
            +  + LD+    ++    L     G+  KA  ++ +A+QLD  +  A
Sbjct: 239 FNTAITLDQNVAESWANQALVYEHNGDKAKAANSYARAVQLDPKYKPA 286


>gi|327401541|ref|YP_004342380.1| hypothetical protein Arcve_1665 [Archaeoglobus veneficus SNP6]
 gi|327317049|gb|AEA47665.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus
           veneficus SNP6]
          Length = 222

 Score = 86.7 bits (213), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 1/189 (0%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           +  F + L+ +P     L   G A      ++ AIS    A++ NP   +AW  RG   +
Sbjct: 22  VEFFSKCLEMEPENIYVLNNLGIALYELGRIDEAISYIDRALELNPDYADAWYNRGIVLS 81

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
             G+  EAI    KA+   P+ A   +  G+  ++  +   A+E    CV +D+E+ +A+
Sbjct: 82  DAGKYDEAIACFEKAIALNPDDAAAWNNMGLAYYESGNMGKAIECYRKCVSIDEEHAAAW 141

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYI 580
             +GLA    G + KAEE+  KA++LD + ++   +L   Y  L   E A+EC  ++L I
Sbjct: 142 YNMGLAYYESGRFNKAEESFKKALELDES-VDTLNNLGIVYGKLRQYEMAMECFNRILEI 200

Query: 581 DKRFSKAYH 589
           D   S A +
Sbjct: 201 DPENSAATY 209



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 1/195 (0%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           R  E  +  F++ ++  P         G A   LG   EAI  + +ALE  P+ AD  + 
Sbjct: 16  RNPEEEVEFFSKCLEMEPENIYVLNNLGIALYELGRIDEAISYIDRALELNPDYADAWYN 75

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RGIV      ++ A+      + L+ ++ +A+  +GLA    G   KA E + K + +D 
Sbjct: 76  RGIVLSDAGKYDEAIACFEKAIALNPDDAAAWNNMGLAYYESGNMGKAIECYRKCVSIDE 135

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
               AW ++   Y +     KA E  ++ L +D+      +L G++   L Q++ A++  
Sbjct: 136 EHAAAWYNMGLAYYESGRFNKAEESFKKALELDESVDTLNNL-GIVYGKLRQYEMAMECF 194

Query: 609 SSGLGIDPSNIECLY 623
           +  L IDP N    Y
Sbjct: 195 NRILEIDPENSAATY 209



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 93/183 (50%), Gaps = 1/183 (0%)

Query: 467 EAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLA 526
           E ++  SK LE EP +  +L+  GI  ++    + A+  +   ++L+ +   A+   G+ 
Sbjct: 20  EEVEFFSKCLEMEPENIYVLNNLGIALYELGRIDEAISYIDRALELNPDYADAWYNRGIV 79

Query: 527 LSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSK 586
           LS  G+Y +A     KAI L+ +   AW ++   Y +  N  KA+EC ++ + ID+  + 
Sbjct: 80  LSDAGKYDEAIACFEKAIALNPDDAAAWNNMGLAYYESGNMGKAIECYRKCVSIDEEHAA 139

Query: 587 AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAAL 646
           A++  GL  +  G+  KA +     L +D S ++ L      Y  + +Y  A++ ++  L
Sbjct: 140 AWYNMGLAYYESGRFNKAEESFKKALELDES-VDTLNNLGIVYGKLRQYEMAMECFNRIL 198

Query: 647 DLE 649
           +++
Sbjct: 199 EID 201



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 2/147 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RGI   + GKY  AI+ F++ +  +P    A    G A      +  AI  + + +  +
Sbjct: 75  NRGIVLSDAGKYDEAIACFEKAIALNPDDAAAWNNMGLAYYESGNMGKAIECYRKCVSID 134

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
                AW   G A    G   +A +   KALE +  S D L+  GIV  K + +  A+E 
Sbjct: 135 EEHAAAWYNMGLAYYESGRFNKAEESFKKALELD-ESVDTLNNLGIVYGKLRQYEMAMEC 193

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGE 532
            +  +++D EN SA TY  L L  + E
Sbjct: 194 FNRILEIDPEN-SAATYNLLILKRLME 219


>gi|411116996|ref|ZP_11389483.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
 gi|410713099|gb|EKQ70600.1| tetratricopeptide repeat protein [Oscillatoriales cyanobacterium
           JSC-12]
          Length = 369

 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 135/307 (43%), Gaps = 34/307 (11%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           ++++ VD    + I    +G Y +AI+  +Q+++  P   +  + +G       + E AI
Sbjct: 3   TEAVDVDSIFQQSIELSLQGNYEAAIAALNQVIELQPDIWDVWVEKGRLLHSLGQFEDAI 62

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           + F +AI   P A       G    ALG    A Q     L+ EPN +D  +  G+  + 
Sbjct: 63  ACFEQAIALQPDAAIPHYSLGWTTYALGNYELAAQSFQTVLKLEPNFSDGYYSLGLTLYA 122

Query: 496 FKDFNAAV-------EDLSAC---------------------------VKLDKENKSAYT 521
              + AA+       ED + C                           ++L  + + AY 
Sbjct: 123 SGQYEAAIGYLHRALEDRTDCADAWYCQGFCLYATHRYEGAVQHFNHVLELQPDYQEAYV 182

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G AL ++G+++ A  ++ KA++L  N LE   H  Q  + L   E+AL+ LQ+V   +
Sbjct: 183 GRGDALRALGDFEAAIASYDKALELGANDLEVMFHQAQCLRQLGRLEEALQTLQRVTEAN 242

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
               +A++ +G +   LG  + A+ D    + ++P++ E  + +      + +  EA+  
Sbjct: 243 ASHWEAWYAQGGIHLKLGDFEAALADYQQVVALNPNSYEAWFNQGVALKNLNQLPEAVTS 302

Query: 642 YDAALDL 648
           YD AL+L
Sbjct: 303 YDKALEL 309



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 98/199 (49%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+  F+ +L+  P Y EA +GRG A     + EAAI+ + +A++   +  E    +
Sbjct: 159 RYEGAVQHFNHVLELQPDYQEAYVGRGDALRALGDFEAAIASYDKALELGANDLEVMFHQ 218

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
            Q    LG   EA+Q L +  E   +  +  + +G ++ K  DF AA+ D    V L+  
Sbjct: 219 AQCLRQLGRLEEALQTLQRVTEANASHWEAWYAQGGIHLKLGDFEAALADYQQVVALNPN 278

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           +  A+   G+AL ++ +  +A  ++ KA++L  N   AW +       +   E A+ C  
Sbjct: 279 SYEAWFNQGVALKNLNQLPEAVTSYDKALELRPNDHRAWNNRGSVLVSMGCLEDAIACFD 338

Query: 576 QVLYIDKRFSKAYHLRGLL 594
           +VL ++   +KA   R +L
Sbjct: 339 KVLELNPDDAKAQQNRLIL 357



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 100/237 (42%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   S G+     G+Y +AI    + L++     +A   +G         E A+  F   
Sbjct: 111 DGYYSLGLTLYASGQYEAAIGYLHRALEDRTDCADAWYCQGFCLYATHRYEGAVQHFNHV 170

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++  P   EA+  RG A  ALG+   AI    KALE   N  +++  +     +      
Sbjct: 171 LELQPDYQEAYVGRGDALRALGDFEAAIASYDKALELGANDLEVMFHQAQCLRQLGRLEE 230

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A++ L    + +  +  A+   G     +G+++ A   + + + L+ N  EAW +     
Sbjct: 231 ALQTLQRVTEANASHWEAWYAQGGIHLKLGDFEAALADYQQVVALNPNSYEAWFNQGVAL 290

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           ++L    +A+    + L +     +A++ RG +L  +G  + AI      L ++P +
Sbjct: 291 KNLNQLPEAVTSYDKALELRPNDHRAWNNRGSVLVSMGCLEDAIACFDKVLELNPDD 347



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           +  + V F  ++ + Q+  G+   A+    ++ + +  + EA   +G       + EAA+
Sbjct: 209 ANDLEVMFHQAQCLRQL--GRLEEALQTLQRVTEANASHWEAWYAQGGIHLKLGDFEAAL 266

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
           +D+ + +  NP++ EAW  +G A   L +  EA+    KALE  PN     + RG V   
Sbjct: 267 ADYQQVVALNPNSYEAWFNQGVALKNLNQLPEAVTSYDKALELRPNDHRAWNNRGSVLVS 326

Query: 496 FKDFNAAVEDLSAC 509
                  +ED  AC
Sbjct: 327 M----GCLEDAIAC 336



 Score = 49.3 bits (116), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 60/123 (48%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           + R++++ +   +   ++G   +  G + +A++ + Q++  +P   EA   +G A     
Sbjct: 235 LQRVTEANASHWEAWYAQGGIHLKLGDFEAALADYQQVVALNPNSYEAWFNQGVALKNLN 294

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           +L  A++ + +A++  P+   AW  RG    ++G   +AI    K LE  P+ A     R
Sbjct: 295 QLPEAVTSYDKALELRPNDHRAWNNRGSVLVSMGCLEDAIACFDKVLELNPDDAKAQQNR 354

Query: 490 GIV 492
            I+
Sbjct: 355 LIL 357


>gi|425455181|ref|ZP_18834906.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
           aeruginosa PCC 9807]
 gi|389803962|emb|CCI17158.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
           aeruginosa PCC 9807]
          Length = 317

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 114/238 (47%), Gaps = 5/238 (2%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           + + + L  GI Q+  G Y  A+  F+Q L+++     A   R     + ++   A  D 
Sbjct: 45  VHLSYWLRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTEIYLQDYLHAWQDC 104

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
           T ++Q       A+  RG A   LG+  +A+ D ++++  +P      + RG+V    K+
Sbjct: 105 TRSLQQQSDNYLAYFHRGLAFYRLGDYPQALTDYNESIRLKPTYYQAYYNRGLVQAAMKN 164

Query: 499 FNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEA 553
           +  A+ D +  ++     +     + Y   GL+  ++  +  A+    +A++L++N   A
Sbjct: 165 YPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNNASA 224

Query: 554 WGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
           + +L      L   ++++  L Q + ID  ++ AY  RGLL H LG ++ A+ DL+ G
Sbjct: 225 YYNLACTAHQLGEYDRSIAHLNQAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQG 282


>gi|145499952|ref|XP_001435960.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124403097|emb|CAK68563.1| unnamed protein product [Paramecium tetraurelia]
          Length = 680

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 126/268 (47%), Gaps = 5/268 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           SRG+  ++   Y  AI  F+  ++ +P YPE    RG AR    EL  AI DF +A++ N
Sbjct: 385 SRGLVYMDMKNYELAIQDFNAAIEMEPTYPETYYNRGLARIEMHELNDAIKDFEQALELN 444

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
            +    +   GQA        +A+  L KAL+  P++ + L +R  +    K++  A+ D
Sbjct: 445 SNNPGIYSGLGQAYRLKKNYEKALFYLDKALKESPHNQEFLVQRSNIFIDKKEYPKAIID 504

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ---LDRNFLEAWGHLTQFYQ 562
           L++ +     +   Y   GLA     E+KK+     KA +         +   HL   + 
Sbjct: 505 LTSALDRKPNDAQIYYRRGLAYYKNQEFKKSIADLYKAFENKPFQSYVPDIHYHLGISFA 564

Query: 563 DLANSEKALECLQQVLYIDKRFSKAY-HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
           +L   +KA+E L   + + K +  AY H R      +G+++ A++D    + + P N   
Sbjct: 565 NLEMFDKAIEPLTNAIDLQK-YEPAYIHERAKCFLLVGENQLALEDFDKVIEMQPHNSHA 623

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDLE 649
            + RA  + A+  Y +A +D+  A DL+
Sbjct: 624 YFGRAFAHKALQSYGKAAEDFGRAKDLD 651



 Score = 80.1 bits (196), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 122/255 (47%), Gaps = 3/255 (1%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           ++ AI++     + +P Y +    RG A     + + A+ DF+ A++   +  E +  RG
Sbjct: 53  FSEAITLLQNSSQTEPQYAKFYAARGNAYMQTGQYQRALFDFSTAVRFEENNAEHYGARG 112

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
                LGE  +A+++  KA++ +     +   R +V  +  ++  A++D    +K  K++
Sbjct: 113 NCFLQLGEVNDALKEYDKAIQIKSTDGFLFLNRALVYARLDNYKKAIDDYQQALKYLKDS 172

Query: 517 KS---AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +   A+ ++G     I  Y ++ E   KA  + ++   A  +L   Y +    E ALE 
Sbjct: 173 NAQFKAHFHMGNCYRQIKMYDQSIEHLQKACDIKKDEAPAHNNLGLSYFENQQYELALER 232

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
             + +  D+  +  Y+ + L L+ LG  K ++ + +  L ID  +   LY R + + A+G
Sbjct: 233 FTRAIEQDESKATYYNNKALALYHLGDLKGSLIEFNKALSIDDQDARALYNRGNTHLALG 292

Query: 634 EYREAIKDYDAALDL 648
           +  EA  DYD A+ L
Sbjct: 293 KRTEAHADYDKAIKL 307



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 103/220 (46%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++ E A+  FT AI+ + S    +  +  A   LG+   ++ + +KAL  +   A  L+ 
Sbjct: 224 QQYELALERFTRAIEQDESKATYYNNKALALYHLGDLKGSLIEFNKALSIDDQDARALYN 283

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG  +        A  D    +KL  +N   Y   GLA     EY+ A +   +A+ +  
Sbjct: 284 RGNTHLALGKRTEAHADYDKAIKLMPKNSKFYHSKGLAYQDSEEYEMAIKMFEEALNITP 343

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
           N + +  HL   Y    N ++AL    QVL  + +    Y  RGL+   +  ++ AI+D 
Sbjct: 344 NHMPSIFHLGLMYHKNDNLKEALSLFTQVLNAEGKDRLVYSSRGLVYMDMKNYELAIQDF 403

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           ++ + ++P+  E  Y R      + E  +AIKD++ AL+L
Sbjct: 404 NAAIEMEPTYPETYYNRGLARIEMHELNDAIKDFEQALEL 443



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 117/259 (45%), Gaps = 34/259 (13%)

Query: 383 FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAI 442
           F  S+G+A  +  +Y  AI +F++ L   P +  ++   G        L+ A+S FT+ +
Sbjct: 314 FYHSKGLAYQDSEEYEMAIKMFEEALNITPNHMPSIFHLGLMYHKNDNLKEALSLFTQVL 373

Query: 443 QSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAA 502
            +       +  RG     +     AIQD + A+E EP   +  + RG+   +  + N A
Sbjct: 374 NAEGKDRLVYSSRGLVYMDMKNYELAIQDFNAAIEMEPTYPETYYNRGLARIEMHELNDA 433

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           ++D    ++L+  N   Y+ LG                 +A +L +N+ +A  +L +  +
Sbjct: 434 IKDFEQALELNSNNPGIYSGLG-----------------QAYRLKKNYEKALFYLDKALK 476

Query: 563 DLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           +  ++++ L   +  ++IDK+                ++ KAI DL+S L   P++ +  
Sbjct: 477 ESPHNQEFL-VQRSNIFIDKK----------------EYPKAIIDLTSALDRKPNDAQIY 519

Query: 623 YLRASCYHAIGEYREAIKD 641
           Y R   Y+   E++++I D
Sbjct: 520 YRRGLAYYKNQEFKKSIAD 538


>gi|427722230|ref|YP_007069507.1| hypothetical protein Lepto7376_0229 [Leptolyngbya sp. PCC 7376]
 gi|427353950|gb|AFY36673.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
           PCC 7376]
          Length = 371

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 115/264 (43%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             +G+    +G+Y   I+ +D+ L  +P + +A   RG A  F    E  +  +  AI  
Sbjct: 75  FEQGLEYGAQGRYEDEIASYDKALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAITL 134

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P+ G+ W  R  A   LG+   AI     A E  P  A+  + RGI+      F   + 
Sbjct: 135 QPNNGDTWFNRAVALENLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEEIA 194

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                + +D  +   +   G++L  +G  ++  E++ KA++ D    +AW +    +  L
Sbjct: 195 SYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFGLL 254

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              EK +E    +L ++   +  ++ RG+ L  LGQ  +AI      + +DP      Y 
Sbjct: 255 GEFEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAIVSYREAIRLDPQRDIVFYN 314

Query: 625 RASCYHAIGEYREAIKDYDAALDL 648
            A     +GE   A+   + A++L
Sbjct: 315 IAVSQVRLGEIDAALDSLEKAIEL 338



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 3/252 (1%)

Query: 370 VTRISKSKSISVDFR---LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           +    K+ +I+ +F      RG+A     +Y   +  +D+ +   P   +    R  A  
Sbjct: 91  IASYDKALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAITLQPNNGDTWFNRAVALE 150

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
              +++AAI+ +  A ++NP   EAW  RG     LG   E I    K+L  +P S D  
Sbjct: 151 NLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEEIASYDKSLSIDPTSTDTW 210

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + RG+           +E     ++ D EN+ A+   G+A   +GE++K  E++   + L
Sbjct: 211 YNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFGLLGEFEKEIESYDILLAL 270

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
           +    + W +      DL    +A+   ++ + +D +    ++   +    LG+   A+ 
Sbjct: 271 NPEDADTWYNRGISLSDLGQESEAIVSYREAIRLDPQRDIVFYNIAVSQVRLGEIDAALD 330

Query: 607 DLSSGLGIDPSN 618
            L   + ++P+N
Sbjct: 331 SLEKAIELNPAN 342



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 2/245 (0%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           +G     Q   E  I+ + +A+  NP   +AW  RG A   L    + +    +A+  +P
Sbjct: 77  QGLEYGAQGRYEDEIASYDKALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAITLQP 136

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N+ D    R +        +AA+    A  + + E+  A+   G+ L  +G +++   ++
Sbjct: 137 NNGDTWFNRAVALENLGQIDAAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEEIASY 196

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            K++ +D    + W +      DL   E+ +E   + L  D     A++ RG+    LG+
Sbjct: 197 DKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFGLLGE 256

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
            +K I+     L ++P + +  Y R      +G+  EAI  Y  A  + LD     V   
Sbjct: 257 FEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAIVSYREA--IRLDPQRDIVFYN 314

Query: 661 LAFYQ 665
           +A  Q
Sbjct: 315 IAVSQ 319



 Score = 63.5 bits (153), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 89/192 (46%), Gaps = 7/192 (3%)

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + ++ E   A+ Y GLAL  +  Y+    ++ +AI L  N  + W +     ++L   +
Sbjct: 97  ALAINPEFHDAWFYRGLALGFLNRYEDEVISYDRAITLQPNNGDTWFNRAVALENLGQID 156

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
            A+   +     +   ++A++ RG+LL GLG+ ++ I      L IDP++ +  Y R   
Sbjct: 157 AAITSYEAAGEANPEDAEAWYNRGILLGGLGRFEEEIASYDKSLSIDPTSTDTWYNRGVS 216

Query: 629 YHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGD 688
              +G   E I+ YD AL+ + ++ +       A+Y + +A     +   E   +DI   
Sbjct: 217 LGDLGRLEEEIESYDKALEQDPENQD-------AWYNRGVAFGLLGEFEKEIESYDILLA 269

Query: 689 IDPLFKEYWCKR 700
           ++P   + W  R
Sbjct: 270 LNPEDADTWYNR 281



 Score = 63.2 bits (152), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 3/152 (1%)

Query: 370 VTRISKSKSI---SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARA 426
           +    KS SI   S D   +RG++  + G+    I  +D+ L++DP   +A   RG A  
Sbjct: 193 IASYDKSLSIDPTSTDTWYNRGVSLGDLGRLEEEIESYDKALEQDPENQDAWYNRGVAFG 252

Query: 427 FQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
              E E  I  +   +  NP   + W  RG + + LG+  EAI    +A+  +P    + 
Sbjct: 253 LLGEFEKEIESYDILLALNPEDADTWYNRGISLSDLGQESEAIVSYREAIRLDPQRDIVF 312

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
           +   +   +  + +AA++ L   ++L+  N+S
Sbjct: 313 YNIAVSQVRLGEIDAALDSLEKAIELNPANRS 344


>gi|393767279|ref|ZP_10355828.1| tpr repeat-containing protein [Methylobacterium sp. GXF4]
 gi|392727180|gb|EIZ84496.1| tpr repeat-containing protein [Methylobacterium sp. GXF4]
          Length = 290

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 4/220 (1%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I+   ++++ +P    A   RG A A   +   AI+DFT+AI  +P++G A+  R  A  
Sbjct: 54  IASLTEVIQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRALAER 113

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
            +G    A+QD SKA+  +PN       R  V     + + A+ DL+  ++L  E+  AY
Sbjct: 114 QVGRDAAALQDFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAY 173

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE--KALECLQQVL 578
              GL     G+  +A      AI  DRN   +  +  +    +A ++  KA+E     L
Sbjct: 174 HARGLVRQKQGQETQAIADFDAAI--DRNPFVSAPYAARGQSLIATNQYPKAIEDYNAAL 231

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            ++ + + ++  RGL     GQ K+A+++      IDP+N
Sbjct: 232 NVNNKDATSWAYRGLAYEKSGQRKEALENYQRAAVIDPNN 271



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 97/214 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G++  AI+ F + +  DP    A   R  A        AA+ DF++AI  +
Sbjct: 73  TRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRALAERQVGRDAAALQDFSKAISID 132

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+ G A+  R     A G   +A+ DL+ A+   P SA+  H RG+V  K      A+ D
Sbjct: 133 PNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAYHARGLVRQKQGQETQAIAD 192

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             A +  +    + Y   G +L +  +Y KA E +  A+ ++     +W +    Y+   
Sbjct: 193 FDAAIDRNPFVSAPYAARGQSLIATNQYPKAIEDYNAALNVNNKDATSWAYRGLAYEKSG 252

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
             ++ALE  Q+   ID   + A    G +  G+G
Sbjct: 253 QRKEALENYQRAAVIDPNNAVARAGLGRVQGGVG 286



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/195 (27%), Positives = 90/195 (46%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  L++ ++  PN A   + RG    +   FN A+ D +  + +D  + SAY    LA  
Sbjct: 54  IASLTEVIQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRALAER 113

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
            +G    A +   KAI +D N+  A+       +   N ++AL  L   + +    ++AY
Sbjct: 114 QVGRDAAALQDFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAY 173

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           H RGL+    GQ  +AI D  + +  +P        R     A  +Y +AI+DY+AAL++
Sbjct: 174 HARGLVRQKQGQETQAIADFDAAIDRNPFVSAPYAARGQSLIATNQYPKAIEDYNAALNV 233

Query: 649 ELDSMEKFVLQCLAF 663
                  +  + LA+
Sbjct: 234 NNKDATSWAYRGLAY 248



 Score = 57.0 bits (136), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 90/223 (40%), Gaps = 21/223 (9%)

Query: 322 NTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTRISK------ 375
           NT   +Y+++   ++  +D T++ S        +   S  A  N+     ++ +      
Sbjct: 72  NTRGAAYARAGQFNDAIADFTKAIS--------IDPNSGSAYNNRALAERQVGRDAAALQ 123

Query: 376 --SKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ 428
             SK+IS+D       + R   +  +G    A+S  +  ++  P   EA   RG  R  Q
Sbjct: 124 DFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESAEAYHARGLVRQKQ 183

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
            +   AI+DF  AI  NP     +  RGQ+  A  +  +AI+D + AL      A     
Sbjct: 184 GQETQAIADFDAAIDRNPFVSAPYAARGQSLIATNQYPKAIEDYNAALNVNNKDATSWAY 243

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
           RG+   K      A+E+      +D  N  A   LG     +G
Sbjct: 244 RGLAYEKSGQRKEALENYQRAAVIDPNNAVARAGLGRVQGGVG 286



 Score = 56.6 bits (135), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/148 (24%), Positives = 67/148 (45%)

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           N  +  L+  ++ +  + +AY   G A +  G++  A     KAI +D N   A+ +   
Sbjct: 51  NVNIASLTEVIQRNPNDAAAYNTRGAAYARAGQFNDAIADFTKAISIDPNSGSAYNNRAL 110

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
             + +     AL+   + + ID  +  AY  R  +    G   +A+ DL+  + + P + 
Sbjct: 111 AERQVGRDAAALQDFSKAISIDPNYGPAYIGRANVERAQGNLDQALSDLNVAIRLMPESA 170

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALD 647
           E  + R       G+  +AI D+DAA+D
Sbjct: 171 EAYHARGLVRQKQGQETQAIADFDAAID 198


>gi|420246619|ref|ZP_14750055.1| tetratricopeptide repeat protein [Burkholderia sp. BT03]
 gi|398073904|gb|EJL65063.1| tetratricopeptide repeat protein [Burkholderia sp. BT03]
          Length = 862

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 2/241 (0%)

Query: 408 LKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVE 467
           +K  P Y +A    G A      L+ A   + +AI+  P    A+   G    A G++  
Sbjct: 132 IKLQPDYADAYNNLGNALQDMSNLDEAAVSYCKAIELKPDHALAFNNLGNVMFAKGDAAT 191

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
           AIQ   KA+E +P+  D  H  G +  +  D  AA+E L   + LD ++  +Y   G  L
Sbjct: 192 AIQCFRKAVELKPDLRDAHHSLGALLREHGDVQAALETLR--LALDPKDADSYNTYGCGL 249

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
              G+ K+AE+A   A+++D     A  +L    ++    ++A     + + ID  F +A
Sbjct: 250 RDAGKLKEAEQAFRDALEIDAELAVAHFNLAGVLRENGELDQAEMSFGEAIRIDAEFGQA 309

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           Y   G LL   G+H++A+K     + IDP +     +    Y  + +   AI  Y  AL+
Sbjct: 310 YRQLGSLLSHAGRHQEALKHCEQAIRIDPESSAAYRMLGEVYTEMKKRPAAILAYRHALE 369

Query: 648 L 648
           L
Sbjct: 370 L 370



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 60/291 (20%), Positives = 121/291 (41%), Gaps = 9/291 (3%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           ++  A  +++ +L+ +P + +AL   G      R  +  I     +I   P A   +   
Sbjct: 19  RFDDARPLYELVLQSEPEHSDALHFLGLLSCQTRNHDEGIRLMERSIAVRPEA-MYFNNY 77

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     +    +AI     A+       D  +  G    + K   A++      +KL  +
Sbjct: 78  GNMLMEVNRVRDAIDSYQHAIRLNALYPDAYNNLGYALCRAKQPEASMRACVNAIKLQPD 137

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              AY  LG AL  +    +A  ++ KAI+L  +   A+ +L        ++  A++C +
Sbjct: 138 YADAYNNLGNALQDMSNLDEAAVSYCKAIELKPDHALAFNNLGNVMFAKGDAATAIQCFR 197

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           + + +      A+H  G LL   G  + A++ L   L +DP + +            G+ 
Sbjct: 198 KAVELKPDLRDAHHSLGALLREHGDVQAALETLR--LALDPKDADSYNTYGCGLRDAGKL 255

Query: 636 REAIKDYDAALDLELD-SMEKFVLQCLA-----FYQKEIALYTASKINSEF 680
           +EA + +  AL+++ + ++  F L  +        Q E++   A +I++EF
Sbjct: 256 KEAEQAFRDALEIDAELAVAHFNLAGVLRENGELDQAEMSFGEAIRIDAEF 306


>gi|390949283|ref|YP_006413042.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiocystis violascens DSM 198]
 gi|390425852|gb|AFL72917.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
           [Thiocystis violascens DSM 198]
          Length = 972

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 134/288 (46%), Gaps = 7/288 (2%)

Query: 369 CVTRISKSKSISVDF-RLSRGIAQV--NEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +T +  + ++  DF      + QV   +G++  A++ + Q    +P    A +      
Sbjct: 242 ALTSLRDAIALKADFAEAHHNLGQVLAEQGRFDEAVASYRQAGLLNPDL--AGLQHSLGL 299

Query: 426 AFQR--ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSA 483
           AF R   L+ A++  + A +S P        +G     LG   EA     +AL  +P +A
Sbjct: 300 AFYRLGRLDEALASLSLAARSEPDQAGVLSDQGNILRELGRFEEARDSYRRALAIDPANA 359

Query: 484 DILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKA 543
                 G +  +    + A+E  +A +++  +    Y   GL L  +G  ++A   + +A
Sbjct: 360 LAHTNLGNLLRELGHLDEALEHHAAALRIAPDYAEGYCNAGLVLQDLGRLEEARAHYSQA 419

Query: 544 IQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKK 603
           + ++ N  +A G+L  ++Q+L    +ALEC ++ L I+ RF++A++  GL+L   G   +
Sbjct: 420 LSINPNLAQAHGNLGNYWQELKRCHEALECYRRALAIEPRFAEAHNNMGLVLLEQGNFDE 479

Query: 604 AIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
           A +     L I P  ++      +C+  +G Y +A+  +D AL +  D
Sbjct: 480 ARERFEQALSIRPDYVDAYLNLGTCHGRVGRYDKALDCFDRALRISPD 527



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 114/255 (44%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+   A+  + + L+  P + EA   RG        LE A++   +AI       EA   
Sbjct: 203 GRLDDALDHYTRALRISPRFAEAHNNRGGTLLSLGHLEEALTSLRDAIALKADFAEAHHN 262

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            GQ  A  G   EA+    +A    P+ A + H  G+  ++    + A+  LS   + + 
Sbjct: 263 LGQVLAEQGRFDEAVASYRQAGLLNPDLAGLQHSLGLAFYRLGRLDEALASLSLAARSEP 322

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +     +  G  L  +G +++A +++ +A+ +D     A  +L    ++L + ++ALE  
Sbjct: 323 DQAGVLSDQGNILRELGRFEEARDSYRRALAIDPANALAHTNLGNLLRELGHLDEALEHH 382

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
              L I   +++ Y   GL+L  LG+ ++A    S  L I+P+  +      + +  +  
Sbjct: 383 AAALRIAPDYAEGYCNAGLVLQDLGRLEEARAHYSQALSINPNLAQAHGNLGNYWQELKR 442

Query: 635 YREAIKDYDAALDLE 649
             EA++ Y  AL +E
Sbjct: 443 CHEALECYRRALAIE 457


>gi|188581172|ref|YP_001924617.1| hypothetical protein Mpop_1919 [Methylobacterium populi BJ001]
 gi|179344670|gb|ACB80082.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium populi
           BJ001]
          Length = 286

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 49/164 (29%), Positives = 84/164 (51%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R +A    G+  +A+  F + +  DP +  A IGR      Q +L  A++D   AI+  
Sbjct: 107 NRALAYRQTGRNDAAMQDFSKAIATDPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLA 166

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P + EA+  RG  R   G++ EAI D + A++  P  A     RG        ++ A+ED
Sbjct: 167 PESAEAYHARGLVRQKQGQNPEAIGDFAAAIDRNPFVAAPYAARGQSLISLNQYDKAIED 226

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            +A + ++ ++ S++ Y GLA       K+A E++ +A +LD N
Sbjct: 227 FNAALNVNSKDASSWAYRGLAYEKTNRRKEANESYQQAARLDPN 270



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 59/214 (27%), Positives = 99/214 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++RG A    G++  AIS F + ++ DP    A   R  A       +AA+ DF++AI +
Sbjct: 72  VTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYRQTGRNDAAMQDFSKAIAT 131

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P+   A+  R     A G+   A+ DL+ A+   P SA+  H RG+V  K      A+ 
Sbjct: 132 DPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLAPESAEAYHARGLVRQKQGQNPEAIG 191

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D +A +  +    + Y   G +L S+ +Y KA E    A+ ++     +W +    Y+  
Sbjct: 192 DFAAAIDRNPFVAAPYAARGQSLISLNQYDKAIEDFNAALNVNSKDASSWAYRGLAYEKT 251

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGL 598
              ++A E  QQ   +D   + A    G +  GL
Sbjct: 252 NRRKEANESYQQAARLDPNNAVAKQGVGRMQGGL 285



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 4/220 (1%)

Query: 401 ISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARA 460
           I+    ++  +P    A + RG A A   +   AISDF++AIQ +P++  A+  R  A  
Sbjct: 54  IASLSDVISRNPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYR 113

Query: 461 ALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAY 520
             G +  A+QD SKA+  +PN +     R  +     D N A+ DL+  ++L  E+  AY
Sbjct: 114 QTGRNDAAMQDFSKAIATDPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLAPESAEAY 173

Query: 521 TYLGLALSSIGEYKKAEEAHLKAIQLDRN-FLEA-WGHLTQFYQDLANSEKALECLQQVL 578
              GL     G+  +A      AI  DRN F+ A +    Q    L   +KA+E     L
Sbjct: 174 HARGLVRQKQGQNPEAIGDFAAAI--DRNPFVAAPYAARGQSLISLNQYDKAIEDFNAAL 231

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            ++ + + ++  RGL      + K+A +       +DP+N
Sbjct: 232 NVNSKDASSWAYRGLAYEKTNRRKEANESYQQAARLDPNN 271



 Score = 76.3 bits (186), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 34/229 (14%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I+  ++ I  NPS   A+  RG A A  G+  EAI D SKA++ +PNSA   + R +   
Sbjct: 54  IASLSDVISRNPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYR 113

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           +    +AA++D S  +  D    +AY         IG       A+L+  Q D N     
Sbjct: 114 QTGRNDAAMQDFSKAIATDPNFSAAY---------IG------RANLERAQGDLN----- 153

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
                          AL  L   + +    ++AYH RGL+    GQ+ +AI D ++ +  
Sbjct: 154 --------------GALNDLNVAIRLAPESAEAYHARGLVRQKQGQNPEAIGDFAAAIDR 199

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           +P        R     ++ +Y +AI+D++AAL++       +  + LA+
Sbjct: 200 NPFVAAPYAARGQSLISLNQYDKAIEDFNAALNVNSKDASSWAYRGLAY 248



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/148 (27%), Positives = 67/148 (45%)

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
           N  +  LS  +  +  +  AY   G A +  G++ +A     KAIQLD N   A+ +   
Sbjct: 51  NVNIASLSDVISRNPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRAL 110

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
            Y+    ++ A++   + +  D  FS AY  R  L    G    A+ DL+  + + P + 
Sbjct: 111 AYRQTGRNDAAMQDFSKAIATDPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLAPESA 170

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALD 647
           E  + R       G+  EAI D+ AA+D
Sbjct: 171 EAYHARGLVRQKQGQNPEAIGDFAAAID 198


>gi|296126399|ref|YP_003633651.1| hypothetical protein [Brachyspira murdochii DSM 12563]
 gi|296018215|gb|ADG71452.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 376

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 4/161 (2%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG++Q+  G+   AI  FD+ ++ DP YP+  + RG ++   ++ E A+ DF +AI+ 
Sbjct: 208 LYRGVSQLVMGRNEEAIKDFDKAIELDPNYPKFYLYRGHSKNLLKKYEEAVKDFDKAIEL 267

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           + +  +A+  RG ++  L +  EAI+D  K +E  PN  D  + RG+        +  +E
Sbjct: 268 DSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDEGIE 327

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
           D     +L+ +N   Y   G    S+    K EEA LK  Q
Sbjct: 328 DFDKIAELNPDNSFVYFVRGNIKKSLN---KDEEA-LKDFQ 364



 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 56/285 (19%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEA----------LIGRGTARAF--------- 427
           RG  + +   Y  AI  + + L+ +P Y EA          L      ++F         
Sbjct: 120 RGDVETDLNLYDEAIEDYKKALELNPNYIEAKKALEEADRKLKEYNLNKSFDNYYIEGVN 179

Query: 428 ---QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSAD 484
              +++ E A+    +AI+ +P+  +A+  RG ++  +G + EAI+D  KA+E +PN   
Sbjct: 180 YYNKKQFEDALKTLNKAIELDPNKAKAYLYRGVSQLVMGRNEEAIKDFDKAIELDPNYPK 239

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
               RG      K +  AV+D    ++LD     AY Y G++   + +Y++A +   K I
Sbjct: 240 FYLYRGHSKNLLKKYEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKYEEAIKDFDKTI 299

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
           +L+ N+++A+ H                                  RGL   GL Q+ + 
Sbjct: 300 ELNPNYIDAYYH----------------------------------RGLSKLGLNQNDEG 325

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
           I+D      ++P N    ++R +   ++ +  EA+KD+    +LE
Sbjct: 326 IEDFDKIAELNPDNSFVYFVRGNIKKSLNKDEEALKDFQKYEELE 370



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 107/228 (46%), Gaps = 28/228 (12%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPN----------------------SADILH 487
           E +K RG     L    EAI+D  KALE  PN                      S D  +
Sbjct: 115 ELYKHRGDVETDLNLYDEAIEDYKKALELNPNYIEAKKALEEADRKLKEYNLNKSFDNYY 174

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
             G+  +  K F  A++ L+  ++LD     AY Y G++   +G  ++A +   KAI+LD
Sbjct: 175 IEGVNYYNKKQFEDALKTLNKAIELDPNKAKAYLYRGVSQLVMGRNEEAIKDFDKAIELD 234

Query: 548 RNFLEAW---GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
            N+ + +   GH       L   E+A++   + + +D  ++KAY  RG+   GL ++++A
Sbjct: 235 PNYPKFYLYRGHSKNL---LKKYEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKYEEA 291

Query: 605 IKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
           IKD    + ++P+ I+  Y R      + +  E I+D+D   +L  D+
Sbjct: 292 IKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDEGIEDFDKIAELNPDN 339



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 5/145 (3%)

Query: 377 KSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQREL 431
           K+I +D     F L RG ++    KY  A+  FD+ ++ D  Y +A + RG ++    + 
Sbjct: 229 KAIELDPNYPKFYLYRGHSKNLLKKYEEAVKDFDKAIELDSNYAKAYMYRGVSKLGLNKY 288

Query: 432 EAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGI 491
           E AI DF + I+ NP+  +A+  RG ++  L ++ E I+D  K  E  P+++ +   RG 
Sbjct: 289 EEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDEGIEDFDKIAELNPDNSFVYFVRGN 348

Query: 492 VNFKFKDFNAAVEDLSACVKLDKEN 516
           +         A++D     +L+K+N
Sbjct: 349 IKKSLNKDEEALKDFQKYEELEKQN 373



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + RG++++   KY  AI  FD+ ++ +P Y +A   RG ++    + +  I DF +  + 
Sbjct: 276 MYRGVSKLGLNKYEEAIKDFDKTIELNPNYIDAYYHRGLSKLGLNQNDEGIEDFDKIAEL 335

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
           NP     +  RG  + +L +  EA++D  K  E E  ++ I
Sbjct: 336 NPDNSFVYFVRGNIKKSLNKDEEALKDFQKYEELEKQNSQI 376


>gi|113477065|ref|YP_723126.1| hypothetical protein Tery_3569 [Trichodesmium erythraeum IMS101]
 gi|110168113|gb|ABG52653.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
          Length = 314

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 4/259 (1%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GKY  AI  FD+ +K  P Y  A   RG A      L  A+++F  AI   P+   AW  
Sbjct: 26  GKYQHAIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPNYYLAWYN 85

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           RG     LG   EAI    KA++ +P+     +  GI   +   +  A E+     K+  
Sbjct: 86  RGNLLNDLGRYQEAISSFEKAIQIQPSFYQAWYNLGISWNRLGHYQEAFENYQQATKIKP 145

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQDLANSEKALE 572
                +   G  L  +G Y+++ ++  + I+L  N   AW     T FY  L ++E  + 
Sbjct: 146 NLYQGWYNEGRVLFDLGRYQRSLKSFEQVIKLKPNHYRAWNFKGKTLFY--LGDAEGEIM 203

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
             ++ + +   + +A++  G  L   G   KAI      + I P      Y +A CY   
Sbjct: 204 SYEKAIEVKIDYQEAWNNLGQALSNSGNWYKAIICFDKAIEIKPGYSLAYYNKARCYALQ 263

Query: 633 GEYREAIKDYDAALDLELD 651
            +   AI+  + A++L  D
Sbjct: 264 EKVYLAIESLEEAINLGTD 282



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 3/224 (1%)

Query: 369 CVTRISKSKSISVDFRLS---RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            +    K+  I  D+  +   RG A    G+   A++ F+  +  +P Y  A   RG   
Sbjct: 31  AIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPNYYLAWYNRGNLL 90

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
                 + AIS F +AIQ  PS  +AW   G +   LG   EA ++  +A + +PN    
Sbjct: 91  NDLGRYQEAISSFEKAIQIQPSFYQAWYNLGISWNRLGHYQEAFENYQQATKIKPNLYQG 150

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            +  G V F    +  +++     +KL   +  A+ + G  L  +G+ +    ++ KAI+
Sbjct: 151 WYNEGRVLFDLGRYQRSLKSFEQVIKLKPNHYRAWNFKGKTLFYLGDAEGEIMSYEKAIE 210

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYH 589
           +  ++ EAW +L Q   +  N  KA+ C  + + I   +S AY+
Sbjct: 211 VKIDYQEAWNNLGQALSNSGNWYKAIICFDKAIEIKPGYSLAYY 254



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 96/205 (46%)

Query: 450 EAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSAC 509
           + W   G   + LG+   AI    KA++ +P+     + RG         + A+ + +  
Sbjct: 13  QGWYNAGVNLSTLGKYQHAIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLA 72

Query: 510 VKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEK 569
           + ++     A+   G  L+ +G Y++A  +  KAIQ+  +F +AW +L   +  L + ++
Sbjct: 73  INMEPNYYLAWYNRGNLLNDLGRYQEAISSFEKAIQIQPSFYQAWYNLGISWNRLGHYQE 132

Query: 570 ALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCY 629
           A E  QQ   I     + ++  G +L  LG++++++K     + + P++      +    
Sbjct: 133 AFENYQQATKIKPNLYQGWYNEGRVLFDLGRYQRSLKSFEQVIKLKPNHYRAWNFKGKTL 192

Query: 630 HAIGEYREAIKDYDAALDLELDSME 654
             +G+    I  Y+ A+++++D  E
Sbjct: 193 FYLGDAEGEIMSYEKAIEVKIDYQE 217



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 5/150 (3%)

Query: 524 GLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKR 583
           G+ LS++G+Y+ A  A  KAI++  ++  AW +     + L     AL      + ++  
Sbjct: 19  GVNLSTLGKYQHAIIAFDKAIKIKPDYYAAWNNRGNALKILGRLHLALNNFNLAINMEPN 78

Query: 584 FSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYD 643
           +  A++ RG LL+ LG++++AI      + I PS  +  Y     ++ +G Y+EA ++Y 
Sbjct: 79  YYLAWYNRGNLLNDLGRYQEAISSFEKAIQIQPSFYQAWYNLGISWNRLGHYQEAFENYQ 138

Query: 644 AALDLELDSMEKF-----VLQCLAFYQKEI 668
            A  ++ +  + +     VL  L  YQ+ +
Sbjct: 139 QATKIKPNLYQGWYNEGRVLFDLGRYQRSL 168


>gi|443327895|ref|ZP_21056502.1| tetratricopeptide repeat protein,protein kinase family protein
           [Xenococcus sp. PCC 7305]
 gi|442792506|gb|ELS01986.1| tetratricopeptide repeat protein,protein kinase family protein
           [Xenococcus sp. PCC 7305]
          Length = 786

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 135/297 (45%), Gaps = 31/297 (10%)

Query: 420 GRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFE 479
           GRGTA        AA+  +  AIQ NP + +AWK RG     L     A+   +K+L+ +
Sbjct: 396 GRGTALYSLERYPAALIAYDRAIQLNPKSEQAWKGRGDTLFRLERFEAALTSYNKSLQIQ 455

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           PN+AD L+ +G   +K + +  A+   +A +K       A +  G+ L  +G+Y++A E+
Sbjct: 456 PNNADSLNRKGRALYKLERYQEALSAQNAALKAKPNYARALSDRGIVLIGLGQYQEAVES 515

Query: 540 HLKAIQLD-------RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRG 592
             +A  ++       +N   AW +L +  +     ++AL+    +L  D R   A   +G
Sbjct: 516 FDQAQGIEPLNPEFWQNKALAWQYLGKNQEAFRLYQEALQAYDTLLQDDPRNVTALIDKG 575

Query: 593 LLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDS 652
            +L  L QH+KA+      +  +P +      + +   A+ +Y+ A++ +D AL L   +
Sbjct: 576 NVLTKLQQHEKALIAYELAIANNPDSHLAWLNKGNVLFALQQYQRALEAFDRALKL---N 632

Query: 653 MEKFVLQ---------CLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
            E ++ Q          L  Y + IA Y            D   D++P+F   W  R
Sbjct: 633 PESYITQHNRGSLLRDGLKDYPEAIASY------------DKSIDLNPIFYHAWRDR 677



 Score = 83.6 bits (205), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 128/270 (47%), Gaps = 8/270 (2%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG A  +  +Y +A+  +D+ ++ +P   +A  GRG         EAA++ + +++Q  P
Sbjct: 397 RGTALYSLERYPAALIAYDRAIQLNPKSEQAWKGRGDTLFRLERFEAALTSYNKSLQIQP 456

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  ++  R+G+A   L    EA+   + AL+ +PN A  L +RGIV      +  AVE  
Sbjct: 457 NNADSLNRKGRALYKLERYQEALSAQNAALKAKPNYARALSDRGIVLIGLGQYQEAVESF 516

Query: 507 SACVKLDK------ENKS-AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
                ++       +NK+ A+ YLG    +   Y++A +A+   +Q D   + A      
Sbjct: 517 DQAQGIEPLNPEFWQNKALAWQYLGKNQEAFRLYQEALQAYDTLLQDDPRNVTALIDKGN 576

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
               L   EKAL   +  +  +     A+  +G +L  L Q+++A++     L ++P + 
Sbjct: 577 VLTKLQQHEKALIAYELAIANNPDSHLAWLNKGNVLFALQQYQRALEAFDRALKLNPESY 636

Query: 620 ECLYLRASCYH-AIGEYREAIKDYDAALDL 648
              + R S     + +Y EAI  YD ++DL
Sbjct: 637 ITQHNRGSLLRDGLKDYPEAIASYDKSIDL 666



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 98/247 (39%), Gaps = 35/247 (14%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  A+  +D +L++DP    ALI +G      ++ E A+  +  AI +NP +  AW  +G
Sbjct: 550 YQEALQAYDTLLQDDPRNVTALIDKGNVLTKLQQHEKALIAYELAIANNPDSHLAWLNKG 609

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERG-IVNFKFKDFNAAVEDLSACVKLDKE 515
               AL +   A++   +AL+  P S    H RG ++    KD+  A+      + L+  
Sbjct: 610 NVLFALQQYQRALEAFDRALKLNPESYITQHNRGSLLRDGLKDYPEAIASYDKSIDLNPI 669

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
              A+   G ALS  G+   A E+   A+++  N  ++W                     
Sbjct: 670 FYHAWRDRGFALSQSGQQYLALESFKTALEIKPNDYKSWIG------------------- 710

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
                          RG+ L  L +  +AI        I P +   L  +AS     G+ 
Sbjct: 711 ---------------RGIALSSLNEMNQAIAAFDKAESIQPKDPFVLINKASALEKTGQR 755

Query: 636 REAIKDY 642
           ++A   Y
Sbjct: 756 QKACVTY 762



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 134/308 (43%), Gaps = 15/308 (4%)

Query: 364 RNKKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEAL 418
           R ++F     S +KS+ +     D    +G A     +Y  A+S  +  LK  P Y  AL
Sbjct: 437 RLERFEAALTSYNKSLQIQPNNADSLNRKGRALYKLERYQEALSAQNAALKAKPNYARAL 496

Query: 419 IGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEF 478
             RG       + + A+  F +A    P   E W+ +  A   LG++ EA +   +AL+ 
Sbjct: 497 SDRGIVLIGLGQYQEAVESFDQAQGIEPLNPEFWQNKALAWQYLGKNQEAFRLYQEALQA 556

Query: 479 -------EPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIG 531
                  +P +   L ++G V  K +    A+      +  + ++  A+   G  L ++ 
Sbjct: 557 YDTLLQDDPRNVTALIDKGNVLTKLQQHEKALIAYELAIANNPDSHLAWLNKGNVLFALQ 616

Query: 532 EYKKAEEAHLKAIQLD-RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           +Y++A EA  +A++L+  +++      +     L +  +A+    + + ++  F  A+  
Sbjct: 617 QYQRALEAFDRALKLNPESYITQHNRGSLLRDGLKDYPEAIASYDKSIDLNPIFYHAWRD 676

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           RG  L   GQ   A++   + L I P++ +    R     ++ E  +AI  +D A  ++ 
Sbjct: 677 RGFALSQSGQQYLALESFKTALEIKPNDYKSWIGRGIALSSLNEMNQAIAAFDKAESIQ- 735

Query: 651 DSMEKFVL 658
              + FVL
Sbjct: 736 -PKDPFVL 742



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 7/177 (3%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALI---GRGTA-RAFQRELEAAISDFTE 440
           L++G       +Y  A+  FD+ LK   + PE+ I    RG+  R   ++   AI+ + +
Sbjct: 606 LNKGNVLFALQQYQRALEAFDRALK---LNPESYITQHNRGSLLRDGLKDYPEAIASYDK 662

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           +I  NP    AW+ RG A +  G+   A++    ALE +PN       RGI      + N
Sbjct: 663 SIDLNPIFYHAWRDRGFALSQSGQQYLALESFKTALEIKPNDYKSWIGRGIALSSLNEMN 722

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHL 557
            A+        +  ++         AL   G+ +KA   + K   L+ +F  A   L
Sbjct: 723 QAIAAFDKAESIQPKDPFVLINKASALEKTGQRQKACVTYKKVTTLNPSFTPAISAL 779


>gi|40063047|gb|AAR37903.1| TPR domain/sulfotransferase domain protein [uncultured marine
           bacterium 560]
          Length = 723

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 122/258 (47%)

Query: 399 SAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQA 458
           +A+  +++ +   P Y EA    G A     +L+ A+  + +AI   P   E     G A
Sbjct: 131 AAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDFAETHNNLGNA 190

Query: 459 RAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKS 518
              LG+  EA++   +A+  + + ++  +  G V  +    + AV+     + +  +   
Sbjct: 191 LQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYDE 250

Query: 519 AYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVL 578
           A+  LG AL  +G+  +A +++ +AI +  +F  A+ +L    ++L   + A+   ++ +
Sbjct: 251 AHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQVDTAVRSYKKAI 310

Query: 579 YIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREA 638
            I   ++KA++  G+ L  LGQ   A+K+L   + I P   E  +        +G+   A
Sbjct: 311 VIKPDYAKAHNNLGIALQDLGQMDTAVKNLEKAIAITPDFAEAHHNLGIALQDLGQIDAA 370

Query: 639 IKDYDAALDLELDSMEKF 656
           +K Y+ A+ ++ D  E +
Sbjct: 371 VKGYEKAIAIKPDYAEAY 388



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 85/379 (22%), Positives = 164/379 (43%), Gaps = 15/379 (3%)

Query: 369 CVTRISKSKSISVDF---RLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR 425
            V    K+ +I  D+     + G+     G+  +A+  ++ +L  +P + EA    G   
Sbjct: 64  AVKSFEKALAIKPDYTEVNYNLGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTL 123

Query: 426 AFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADI 485
               +L+AA+  + +AI   P   EA    G A   LG+   A++   KA+  +P+ A+ 
Sbjct: 124 KELEQLDAAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDFAET 183

Query: 486 LHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQ 545
            +  G         + AV+     + +  +  +AY  LG  L  +G+   A +++ KAI 
Sbjct: 184 HNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQLDDAVKSYEKAIA 243

Query: 546 LDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAI 605
           +  ++ EA  +L    Q L   ++A++  +Q + I   FS AY+  G +L  LGQ   A+
Sbjct: 244 IKPDYDEAHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQVDTAV 303

Query: 606 KDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
           +     + I P   +           +G+   A+K+ + A+ +  D  E       A + 
Sbjct: 304 RSYKKAIVIKPDYAKAHNNLGIALQDLGQMDTAVKNLEKAIAITPDFAE-------AHHN 356

Query: 666 KEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHPKNVCEKVYRQPPLRDSLKKGKL 725
             IAL    +I++    ++    I P + E +    H  +  +K     P + S+ +  L
Sbjct: 357 LGIALQDLGQIDAAVKGYEKAIAIKPDYAEAY----HNLSYLKKYTANDP-QISIMQSLL 411

Query: 726 RRQDFSVTKQKTALLLVAD 744
            R D +++ +    L +A+
Sbjct: 412 SRSDLNLSNRIHLCLALAE 430



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 111/257 (43%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           GK   AI     + K+ P  P      G       +L+ A+  F +A+   P   E    
Sbjct: 25  GKINEAIDAIKVLTKDFPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEVNYN 84

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            G     LG+   A++     L   P  A+  +  G+   + +  +AAV+     + +  
Sbjct: 85  LGLTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAIAIKP 144

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           +   A+  LG AL  +G+   A +++ KAI +  +F E   +L    Q L   ++A++  
Sbjct: 145 DYAEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDFAETHNNLGNALQGLGQLDEAVKSY 204

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           +Q + I   FS AY+  G +L  LGQ   A+K     + I P   E      +    +G+
Sbjct: 205 EQAIAIQSDFSNAYYNLGNVLRELGQLDDAVKSYEKAIAIKPDYDEAHNNLGNALQGLGQ 264

Query: 635 YREAIKDYDAALDLELD 651
             EA+K Y+ A+ ++ D
Sbjct: 265 LDEAVKSYEQAIAIQSD 281



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 116/264 (43%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G+     G+   A+  F++ L   P Y E     G       +L+AA+  + + +  NP 
Sbjct: 52  GVCYKTIGQLDVAVKSFEKALAIKPDYTEVNYNLGLTFQELGQLDAAVKCYEDVLAVNPE 111

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
             EA    G     L +   A++   KA+  +P+ A+  +  G    +    + AV+   
Sbjct: 112 HAEAHNNLGVTLKELEQLDAAVKSYEKAIAIKPDYAEAHNNLGNALKELGQLDVAVKSYE 171

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + +  +    +  LG AL  +G+  +A +++ +AI +  +F  A+ +L    ++L   
Sbjct: 172 KAIAIKPDFAETHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGNVLRELGQL 231

Query: 568 EKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRAS 627
           + A++  ++ + I   + +A++  G  L GLGQ  +A+K     + I        Y   +
Sbjct: 232 DDAVKSYEKAIAIKPDYDEAHNNLGNALQGLGQLDEAVKSYEQAIAIQSDFSNAYYNLGN 291

Query: 628 CYHAIGEYREAIKDYDAALDLELD 651
               +G+   A++ Y  A+ ++ D
Sbjct: 292 VLRELGQVDTAVRSYKKAIVIKPD 315



 Score = 47.4 bits (111), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 71/156 (45%)

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
            N A++ +    K        Y   G+   +IG+   A ++  KA+ +  ++ E   +L 
Sbjct: 27  INEAIDAIKVLTKDFPNEPLLYNISGVCYKTIGQLDVAVKSFEKALAIKPDYTEVNYNLG 86

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
             +Q+L   + A++C + VL ++   ++A++  G+ L  L Q   A+K     + I P  
Sbjct: 87  LTFQELGQLDAAVKCYEDVLAVNPEHAEAHNNLGVTLKELEQLDAAVKSYEKAIAIKPDY 146

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSME 654
            E      +    +G+   A+K Y+ A+ ++ D  E
Sbjct: 147 AEAHNNLGNALKELGQLDVAVKSYEKAIAIKPDFAE 182


>gi|332709397|ref|ZP_08429359.1| hypothetical protein LYNGBM3L_39350 [Moorea producens 3L]
 gi|332351943|gb|EGJ31521.1| hypothetical protein LYNGBM3L_39350 [Moorea producens 3L]
          Length = 932

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 111/235 (47%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D    RG+A     +Y  AI+ +D++++  P  P++   RG A    R  E A+  F + 
Sbjct: 671 DIWYQRGMALWELQQYQDAIASYDKVIEIKPDDPDSWYQRGLALMELRRYEGAVVAFNKV 730

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++  P   +AW  RG     L    +AI    KALE +PN      +RG+     +    
Sbjct: 731 VKFKPDHYKAWLNRGMTLRRLRRYEDAIASYDKALEIQPNYHQAWVDRGVALGMLQKHEE 790

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A       V++  +N  A+   G+AL  +  Y++A  +  KAI+L+ +  +AW +     
Sbjct: 791 AFGSFDQAVQVQPDNTVAWLNRGMALDVLERYQEAVASFDKAIELNSDSHKAWNYRGSTL 850

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP 616
             L  +++ALE + + L I   ++  Y+ + ++    G+   A+++L   + ++P
Sbjct: 851 VKLEQNDQALESINRALEIQPEYAAGYYNKAIVYSSQGRVTLAVENLEQAIELNP 905



 Score = 78.2 bits (191), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 131/270 (48%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           ++ D  +++G    ++G+Y  AI+ +DQ+L   P  P+    RG A    ++ + AI+ +
Sbjct: 634 LNPDDYVNQGNTLFSQGQYQDAIASYDQVLDLQPNNPDIWYQRGMALWELQQYQDAIASY 693

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
            + I+  P   ++W +RG A   L     A+   +K ++F+P+       RG+   + + 
Sbjct: 694 DKVIEIKPDDPDSWYQRGLALMELRRYEGAVVAFNKVVKFKPDHYKAWLNRGMTLRRLRR 753

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  A+      +++      A+   G+AL  + ++++A  +  +A+Q+  +   AW +  
Sbjct: 754 YEDAIASYDKALEIQPNYHQAWVDRGVALGMLQKHEEAFGSFDQAVQVQPDNTVAWLNRG 813

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                L   ++A+    + + ++    KA++ RG  L  L Q+ +A++ ++  L I P  
Sbjct: 814 MALDVLERYQEAVASFDKAIELNSDSHKAWNYRGSTLVKLEQNDQALESINRALEIQPEY 873

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDL 648
               Y +A  Y + G    A+++ + A++L
Sbjct: 874 AAGYYNKAIVYSSQGRVTLAVENLEQAIEL 903



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 93/198 (46%)

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
           +G    + G+  +AI    + L+ +PN+ DI ++RG+  ++ + +  A+      +++  
Sbjct: 642 QGNTLFSQGQYQDAIASYDQVLDLQPNNPDIWYQRGMALWELQQYQDAIASYDKVIEIKP 701

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           ++  ++   GLAL  +  Y+ A  A  K ++   +  +AW +     + L   E A+   
Sbjct: 702 DDPDSWYQRGLALMELRRYEGAVVAFNKVVKFKPDHYKAWLNRGMTLRRLRRYEDAIASY 761

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + L I   + +A+  RG+ L  L +H++A       + + P N      R      +  
Sbjct: 762 DKALEIQPNYHQAWVDRGVALGMLQKHEEAFGSFDQAVQVQPDNTVAWLNRGMALDVLER 821

Query: 635 YREAIKDYDAALDLELDS 652
           Y+EA+  +D A++L  DS
Sbjct: 822 YQEAVASFDKAIELNSDS 839



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 79/168 (47%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+RG+      +Y  AI+ +D+ L+  P Y +A + RG A    ++ E A   F +A+Q 
Sbjct: 742 LNRGMTLRRLRRYEDAIASYDKALEIQPNYHQAWVDRGVALGMLQKHEEAFGSFDQAVQV 801

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    AW  RG A   L    EA+    KA+E   +S    + RG    K +  + A+E
Sbjct: 802 QPDNTVAWLNRGMALDVLERYQEAVASFDKAIELNSDSHKAWNYRGSTLVKLEQNDQALE 861

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
            ++  +++  E  + Y    +  SS G    A E   +AI+L+  + E
Sbjct: 862 SINRALEIQPEYAAGYYNKAIVYSSQGRVTLAVENLEQAIELNPRYRE 909


>gi|153808042|ref|ZP_01960710.1| hypothetical protein BACCAC_02328 [Bacteroides caccae ATCC 43185]
 gi|149129651|gb|EDM20865.1| tetratricopeptide repeat protein [Bacteroides caccae ATCC 43185]
          Length = 677

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 117/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD+++A EDL   +K+    
Sbjct: 98  LARIRQSKFDGAIEDYQKALHYDPENITLWHNLTLSHIQKKDYDSAKEDLENLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            + +A+  LQQ
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------AARAIVKLQQ 205

Query: 577 VLY--IDKRFSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y   +  F +A HL          R L        + A+ D    L IDP+N    Y 
Sbjct: 206 SKYGEAESDFDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 265

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 266 RGLLRARVGDDNRAIEDFDFVIKMEPDNM 294



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KY  A S FD+ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVKLQQSKYGEAESDFDRAIHLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAIFNRGLLRAQTGDYRGAIQD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            S  +       + Y     A   IG+ K AE+   K +  QLD+
Sbjct: 317 YSTVINQHPNFLAGYYQRAEARKKIGDRKGAEQDEFKLLKAQLDK 361



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A SDF  AI  
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQSKYGEAESDFDRAIHL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 282 DFDFVIKMEPDNMMAIFNRGLLRAQTGDYRGAIQDYSTVINQHPNFLAGY 331



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 119/283 (42%), Gaps = 8/283 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D++  I  +
Sbjct: 265 NRGLLRARVGDDNRAIEDFDFVIKMEPDNMMAIFNRGLLRAQTGDYRGAIQDYSTVINQH 324

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    + +R +AR  +G+   A QD  K L+ + +  + +  + +   +  D ++  +D
Sbjct: 325 PNFLAGYYQRAEARKKIGDRKGAEQDEFKLLKAQLDKQNGVTNKDVAQNQNPDQDSEGDD 384

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF-LEAWGHLTQFYQDL 564
                K   +N + Y  + +A  S  E +   +   +    + N  LE    LT +Y+ +
Sbjct: 385 KDRTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNITLEPMFALT-YYEKM 443

Query: 565 A------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
           +      N  K +E L +   + KR         L    +  H   I   +S +  D  N
Sbjct: 444 SDVKRSVNFHKYVEELNRSGVLPKRLRITNMEAPLTEEQVKFHFALIDTHTSAIVDDEKN 503

Query: 619 IECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
               + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 504 ASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 546



 Score = 48.1 bits (113), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRARVGDDNRAIEDFDFVIKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD S  +   PN     ++R     K  D   A +
Sbjct: 290 EPDNMMAIFNRGLLRAQTGDYRGAIQDYSTVINQHPNFLAGYYQRAEARKKIGDRKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  LDK+N
Sbjct: 350 DEFKLLKAQLDKQN 363



 Score = 45.8 bits (107), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 38/75 (50%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  +AI+D+ +AI+ NP   +A+  RG     LG
Sbjct: 586 LDKVINLAPDFVYAYYNRANVSAMLKDYRSAIADYNKAIELNPDFADAYFNRGLTHIFLG 645

Query: 464 ESVEAIQDLSKALEF 478
            +   I DLSKA E 
Sbjct: 646 NNKLGISDLSKAGEL 660


>gi|398338140|ref|ZP_10522845.1| hypothetical protein LkmesMB_22907 [Leptospira kmetyi serovar
           Malaysia str. Bejo-Iso9]
          Length = 255

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 4/160 (2%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           TR+++  + ++DFR   G  +VN  KYA AI  F++ ++ +    +A+  RG    +  E
Sbjct: 59  TRLTEDDN-AIDFR---GWIKVNLYKYADAIVDFNEAIRLNANNSQAIFHRGYTYYYMGE 114

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
            + A++D  E+I+ NP    ++  RG+    L    EAI+DL++ +E +PN  + L ERG
Sbjct: 115 YKKALTDINESIRLNPEFNRSYLMRGKIGNELQAYSEAIEDLNRCIEVDPNWVEALVERG 174

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI 530
            V+ +      A +D    ++LD +N  AY   G+ L S+
Sbjct: 175 AVSIRMSKLGDAYQDFDKVIQLDPKNPRAYYNRGIILVSV 214



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%)

Query: 434 AISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVN 493
           AI DF EAI+ N +  +A   RG     +GE  +A+ D+++++   P        RG + 
Sbjct: 84  AIVDFNEAIRLNANNSQAIFHRGYTYYYMGEYKKALTDINESIRLNPEFNRSYLMRGKIG 143

Query: 494 FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            + + ++ A+EDL+ C+++D     A    G     + +   A +   K IQLD
Sbjct: 144 NELQAYSEAIEDLNRCIEVDPNWVEALVERGAVSIRMSKLGDAYQDFDKVIQLD 197



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 91/188 (48%), Gaps = 19/188 (10%)

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           E+ +A  + G    ++ +Y  A     +AI+L+ N  +A  H    Y  +   +KAL  +
Sbjct: 63  EDDNAIDFRGWIKVNLYKYADAIVDFNEAIRLNANNSQAIFHRGYTYYYMGEYKKALTDI 122

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
            + + ++  F+++Y +RG + + L  + +AI+DL+  + +DP+ +E L  R +    + +
Sbjct: 123 NESIRLNPEFNRSYLMRGKIGNELQAYSEAIEDLNRCIEVDPNWVEALVERGAVSIRMSK 182

Query: 635 YREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFK 694
             +A +D+D  + L+  +         A+Y + I L +            ++   +P FK
Sbjct: 183 LGDAYQDFDKVIQLDPKNPR-------AYYNRGIILVS------------VNSTENPDFK 223

Query: 695 EYWCKRLH 702
           +  CK L+
Sbjct: 224 KNGCKDLY 231


>gi|170740913|ref|YP_001769568.1| hypothetical protein M446_2695 [Methylobacterium sp. 4-46]
 gi|168195187|gb|ACA17134.1| TPR repeat-containing protein [Methylobacterium sp. 4-46]
          Length = 292

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 58/214 (27%), Positives = 98/214 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG A    G Y  AI+ F + ++ DP    A   R  A       +AA+ DFT A+ ++
Sbjct: 75  TRGAAYARAGNYGEAIADFTKAVQLDPNSASAYSNRALAYRQSGRNDAALQDFTRALTAD 134

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  R   + A+G    A  DLS+A+   P SA+  H RG+V        AA+ D
Sbjct: 135 PNYSAAYIGRANLQRAMGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGD 194

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
             A +  +    + Y   G +L +  +Y KA E    A+ ++    ++W +    Y+   
Sbjct: 195 FDAAIDRNPFVSAPYAARGQSLIATNQYDKAIEDFNAALNVNNKDADSWAYRGVAYEKSG 254

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
             ++A+E  Q+   ID+  + A    G +  G+ 
Sbjct: 255 RRQEAMESYQRATAIDQNNAVARQGLGRVQGGMA 288



 Score = 80.9 bits (198), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 65/251 (25%), Positives = 118/251 (47%), Gaps = 11/251 (4%)

Query: 370 VTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQR 429
           V+R + ++  +V      G A VN       I+    +++ +P  P A   RG A A   
Sbjct: 32  VSRATATRQFAVLETDKTGAADVN-------IASLTDVIQRNPSDPAAYNTRGAAYARAG 84

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
               AI+DFT+A+Q +P++  A+  R  A    G +  A+QD ++AL  +PN +     R
Sbjct: 85  NYGEAIADFTKAVQLDPNSASAYSNRALAYRQSGRNDAALQDFTRALTADPNYSAAYIGR 144

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
             +     ++ AA  DLS  ++L  E+  AY   GL   + G+++ A      AI  DRN
Sbjct: 145 ANLQRAMGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGDFDAAI--DRN 202

Query: 550 FLEAWGHLTQFYQDLANSE--KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
              +  +  +    +A ++  KA+E     L ++ + + ++  RG+     G+ ++A++ 
Sbjct: 203 PFVSAPYAARGQSLIATNQYDKAIEDFNAALNVNNKDADSWAYRGVAYEKSGRRQEAMES 262

Query: 608 LSSGLGIDPSN 618
                 ID +N
Sbjct: 263 YQRATAIDQNN 273



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 49/195 (25%), Positives = 90/195 (46%)

Query: 469 IQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           I  L+  ++  P+     + RG    +  ++  A+ D +  V+LD  + SAY+   LA  
Sbjct: 56  IASLTDVIQRNPSDPAAYNTRGAAYARAGNYGEAIADFTKAVQLDPNSASAYSNRALAYR 115

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
             G    A +   +A+  D N+  A+       + + N E A   L Q + +    ++AY
Sbjct: 116 QSGRNDAALQDFTRALTADPNYSAAYIGRANLQRAMGNYEAAYSDLSQAIRLTPESAEAY 175

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           H RGL+    GQH+ AI D  + +  +P        R     A  +Y +AI+D++AAL++
Sbjct: 176 HARGLVRQAQGQHRAAIGDFDAAIDRNPFVSAPYAARGQSLIATNQYDKAIEDFNAALNV 235

Query: 649 ELDSMEKFVLQCLAF 663
                + +  + +A+
Sbjct: 236 NNKDADSWAYRGVAY 250



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/140 (31%), Positives = 59/140 (42%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           + R   Q   G Y +A S   Q ++  P   EA   RG  R  Q +  AAI DF  AI  
Sbjct: 142 IGRANLQRAMGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQGQHRAAIGDFDAAIDR 201

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP     +  RGQ+  A  +  +AI+D + AL      AD    RG+   K      A+E
Sbjct: 202 NPFVSAPYAARGQSLIATNQYDKAIEDFNAALNVNNKDADSWAYRGVAYEKSGRRQEAME 261

Query: 505 DLSACVKLDKENKSAYTYLG 524
                  +D+ N  A   LG
Sbjct: 262 SYQRATAIDQNNAVARQGLG 281


>gi|423063588|ref|ZP_17052378.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
 gi|406715020|gb|EKD10178.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
          Length = 265

 Score = 86.3 bits (212), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 36/239 (15%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESV-EAIQDLSKALEFE 479
           RG AR  + + + AI+DFT+AI+ N +   A+  RG  R  +G ++ EAI D ++A+   
Sbjct: 48  RGVARYQRGDKQGAIADFTQAIRLNRNHALAYYNRGVVRFRIGNNLTEAIADFTQAIRIN 107

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           P   D  + R I   K + +  A++D++  + LD  +  A+   GL  S           
Sbjct: 108 PEYVDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYS----------- 156

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
                                 ++L + +  +    + + ++ R    Y  RG   + +G
Sbjct: 157 ----------------------ENLKDYQTGINDFTEAIRLNPRNPAPYFKRGNARYRIG 194

Query: 600 QHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD--SMEKF 656
             ++AI D +  + I+PS+ E  Y RA   + IG+ + AI D   + DL LD  + EK+
Sbjct: 195 DRERAIDDYNKAIDINPSDPEPYYNRAISRYQIGDRQGAIFDLQKSADLYLDLGNFEKY 253



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 55/211 (26%), Positives = 105/211 (49%), Gaps = 8/211 (3%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTAR-AFQRELEAAISDFTEAIQ 443
             RG+A+   G    AI+ F Q ++ +  +  A   RG  R      L  AI+DFT+AI+
Sbjct: 46  FERGVARYQRGDKQGAIADFTQAIRLNRNHALAYYNRGVVRFRIGNNLTEAIADFTQAIR 105

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV-NFKFKDFNAA 502
            NP   +A+  R  AR  + +   AI D+++ +  +P+     + RG++ +   KD+   
Sbjct: 106 INPEYVDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYSENLKDYQTG 165

Query: 503 VEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQ 562
           + D +  ++L+  N + Y   G A   IG+ ++A + + KAI ++ +  E + +      
Sbjct: 166 INDFTEAIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAIDINPSDPEPYYNRAISRY 225

Query: 563 DLANSEKALECLQQV--LYID----KRFSKA 587
            + + + A+  LQ+   LY+D    +++ KA
Sbjct: 226 QIGDRQGAIFDLQKSADLYLDLGNFEKYQKA 256



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 12/157 (7%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQ-RELEAAISDFT 439
           VD   +R IA+V   +Y  AI    Q++  DP +  A   RG   +   ++ +  I+DFT
Sbjct: 111 VDAYYNRAIARVKVQQYWPAIDDVTQVISLDPSHDRAFYLRGLIYSENLKDYQTGINDFT 170

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           EAI+ NP     + +RG AR  +G+   AI D +KA++  P+  +  + R I  ++  D 
Sbjct: 171 EAIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAIDINPSDPEPYYNRAISRYQIGDR 230

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
             A+ DL          KSA  YL L   +  +Y+KA
Sbjct: 231 QGAIFDL---------QKSADLYLDLG--NFEKYQKA 256



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 104/235 (44%), Gaps = 37/235 (15%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
           + ++  ++ + S  +A E ++R G AR   G+   AI D ++A+    N A   + RG+V
Sbjct: 27  SVVARSSQEVVSQITATEFFER-GVARYQRGDKQGAIADFTQAIRLNRNHALAYYNRGVV 85

Query: 493 NFKF-KDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFL 551
            F+   +   A+ D +  ++++ E   AY    +A   + +Y                  
Sbjct: 86  RFRIGNNLTEAIADFTQAIRINPEYVDAYYNRAIARVKVQQY------------------ 127

Query: 552 EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLL-HGLGQHKKAIKDLSS 610
             W               A++ + QV+ +D    +A++LRGL+    L  ++  I D + 
Sbjct: 128 --W--------------PAIDDVTQVISLDPSHDRAFYLRGLIYSENLKDYQTGINDFTE 171

Query: 611 GLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQ 665
            + ++P N    + R +  + IG+   AI DY+ A+D+     E +  + ++ YQ
Sbjct: 172 AIRLNPRNPAPYFKRGNARYRIGDRERAIDDYNKAIDINPSDPEPYYNRAISRYQ 226



 Score = 50.4 bits (119), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 11/134 (8%)

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELE 432
           IS   S    F L   I   N   Y + I+ F + ++ +P  P     RG AR    + E
Sbjct: 138 ISLDPSHDRAFYLRGLIYSENLKDYQTGINDFTEAIRLNPRNPAPYFKRGNARYRIGDRE 197

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI D+ +AI  NPS  E +  R  +R  +G+   AI DL K       SAD+  + G  
Sbjct: 198 RAIDDYNKAIDINPSDPEPYYNRAISRYQIGDRQGAIFDLQK-------SADLYLDLG-- 248

Query: 493 NFKFKDFNAAVEDL 506
              F+ +  A++ L
Sbjct: 249 --NFEKYQKAIDTL 260


>gi|160883803|ref|ZP_02064806.1| hypothetical protein BACOVA_01775 [Bacteroides ovatus ATCC 8483]
 gi|156110888|gb|EDO12633.1| tetratricopeptide repeat domain protein [Bacteroides ovatus ATCC
           8483]
          Length = 676

 Score = 86.3 bits (212), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 118/269 (43%), Gaps = 24/269 (8%)

Query: 397 YASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRG 456
           Y  +I  F+Q++   P   E    R  A+    + + A +D   AIQ NP    A++ RG
Sbjct: 38  YVLSIQYFNQVINAKPYLYEPYFFRALAKLNLEDFQGAEADCDAAIQRNPFVVGAYQIRG 97

Query: 457 QARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKEN 516
            AR    +   AI+D  KAL ++P +  + H   + + + KD++AA EDL + +K+    
Sbjct: 98  LARIRQNKFDGAIEDYKKALHYDPENITLWHNLTLSHIQKKDYDAAKEDLESLLKVSPRY 157

Query: 517 KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
             AY   G       +   A     KA++LD+   +AW            + +A+  LQQ
Sbjct: 158 TRAYLMRGEVSLQQKDTIAALNDFNKALELDKYDPDAW------------AARAIVKLQQ 205

Query: 577 VLYIDKR--FSKAYHL----------RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             Y +    F++A  L          R L        + A+ D    L IDP+N    Y 
Sbjct: 206 AKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYN 265

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSM 653
           R      +G+   AI+D+D  + +E D+M
Sbjct: 266 RGLLRAQVGDDNRAIEDFDFVIKMEPDNM 294



 Score = 65.5 bits (158), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 2/165 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +R I ++ + KYA A + F++ +          I R  AR  Q  L  A+SD+  A+  +
Sbjct: 197 ARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDLALDID 256

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+       RG  RA +G+   AI+D    ++ EP++   +  RG++  +  D+  A++D
Sbjct: 257 PNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQD 316

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI--QLDR 548
            +  +       + Y     A   IG+ K AE+   K +  Q+D+
Sbjct: 317 YTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQDEFKVMKAQIDK 361



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 77/170 (45%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L RG   + +    +A++ F++ L+ D   P+A   R   +  Q +   A +DF  AI  
Sbjct: 162 LMRGEVSLQQKDTIAALNDFNKALELDKYDPDAWAARAIVKLQQAKYAEAEADFNRAIPL 221

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +      +  R  AR        A+ D   AL+ +PN+    + RG++  +  D N A+E
Sbjct: 222 SAKNAGNYINRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIE 281

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
           D    +K++ +N  A    GL  +  G+Y+ A + +   I    NFL  +
Sbjct: 282 DFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGY 331



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 34/253 (13%)

Query: 389 IAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSA 448
           ++ + +  Y +A    + +LK  P Y  A + RG     Q++  AA++DF +A++ +   
Sbjct: 132 LSHIQKKDYDAAKEDLESLLKVSPRYTRAYLMRGEVSLQQKDTIAALNDFNKALELDKYD 191

Query: 449 GEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSA 508
            +AW  R   +    +  EA  D ++A+     +A     R +  F   +   A+ D   
Sbjct: 192 PDAWAARAIVKLQQAKYAEAEADFNRAIPLSAKNAGNYINRALARFHQNNLRGAMSDYDL 251

Query: 509 CVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSE 568
            + +D  N             IG Y             +R  L A          + +  
Sbjct: 252 ALDIDPNN------------FIGHY-------------NRGLLRAQ---------VGDDN 277

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           +A+E    V+ ++     A   RGLL    G ++ AI+D ++ +   P+ +   Y R+  
Sbjct: 278 RAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEA 337

Query: 629 YHAIGEYREAIKD 641
              IG+ + A +D
Sbjct: 338 RRKIGDKKGAEQD 350



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 116/286 (40%), Gaps = 16/286 (5%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+ +   G    AI  FD ++K +P    A+  RG  RA   +   AI D+T  I   
Sbjct: 265 NRGLLRAQVGDDNRAIEDFDFVIKMEPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQY 324

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+    + +R +AR  +G+   A QD     EF+   A I  + G+ N           D
Sbjct: 325 PNFLAGYYQRSEARRKIGDKKGAEQD-----EFKVMKAQIDKQNGVTNKDVAQNKDKEND 379

Query: 506 LSACVKLDKE-NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF---LEAWGHLTQFY 561
                K  K+ +K+   Y  + ++   E ++   +  +    D+N    LE    LT +Y
Sbjct: 380 EEGGEKTRKKSDKNMNNYRKIVIADDSEAEQRYTSDYRGRVQDKNVNITLEPMFALT-YY 438

Query: 562 QDLA------NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           + ++      N  K +E L +   + KR         L    +  H   I   +S +  D
Sbjct: 439 EKMSDVKRSVNFHKYIEDLNRTGILPKRLRITNMEAPLTEEQVKVHFALIDTHTSAIVED 498

Query: 616 PSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCL 661
             N    + RA  ++ + ++  A+ D    + L+ D    + ++ L
Sbjct: 499 DKNASKRFARAIDFYLVQDFSSAVSDLTQTILLDGDFFPAYFMRAL 544



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 37/75 (49%)

Query: 404 FDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALG 463
            D+++   P +  A   R    A  ++  AAI D+ +AI+ NP   +A+  RG     LG
Sbjct: 585 LDKVINLAPDFVYAYYNRANVSAMLKDYRAAIIDYDKAIELNPDFADAYFNRGLTHIFLG 644

Query: 464 ESVEAIQDLSKALEF 478
            +   I DLSKA E 
Sbjct: 645 NNKLGISDLSKAGEL 659



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 2/134 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++R +A+ ++     A+S +D  L  DP        RG  RA   +   AI DF   I+ 
Sbjct: 230 INRALARFHQNNLRGAMSDYDLALDIDPNNFIGHYNRGLLRAQVGDDNRAIEDFDFVIKM 289

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P    A   RG  RA  G+   AIQD +  +   PN     ++R     K  D   A +
Sbjct: 290 EPDNMMAVFNRGLLRAQTGDYRGAIQDYTTVINQYPNFLAGYYQRSEARRKIGDKKGAEQ 349

Query: 505 DLSACVK--LDKEN 516
           D    +K  +DK+N
Sbjct: 350 DEFKVMKAQIDKQN 363


>gi|113477402|ref|YP_723463.1| hypothetical protein Tery_3965 [Trichodesmium erythraeum IMS101]
 gi|110168450|gb|ABG52990.1| TPR repeat [Trichodesmium erythraeum IMS101]
          Length = 425

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 130/337 (38%), Gaps = 80/337 (23%)

Query: 410 EDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAI 469
           E  +Y +A+     A++   + E AI D +  I+ NPS  EA+ RRG A   LG   EAI
Sbjct: 2   EQEIYSQAV-----AKSCAGDYEGAIQDLSRVIEINPSFAEAYYRRGLAEFDLGNWEEAI 56

Query: 470 QDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL-- 527
            D ++AL    N  +    RGI      +    + D    + +D +   AY  LG A   
Sbjct: 57  ADYTEALAINSNYINAYFGRGIARLIVGNIAGTIMDAHQIIGIDDKYAPAYKLLGNAYDK 116

Query: 528 -----SSIGEYKKAEEAHLK-----------------------AIQLDRNFLEAWGHLTQ 559
                 +I   K+  E +L+                       +++ D NF    G    
Sbjct: 117 QGNQADAIASLKRGAELYLEQKDAVNCRQCLDSIKKLQNFVPASVKNDGNFQWKKGDSKT 176

Query: 560 FYQDL------ANSEKALECLQQVLYIDK------------RFSK--------------- 586
           F  ++       N +  +  L   L +DK            R+ +               
Sbjct: 177 FLNEILSRFEKGNVQGVMADLNWALKVDKYDYEAYCFRGIIRYKQGDDFGAMSDFNEALQ 236

Query: 587 -------AYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAI 639
                  AY  RG++   +G  K AI D ++ L I+P+N      R + Y  IG Y+EAI
Sbjct: 237 LNNQSVLAYQYRGIVRGQIGDFKGAIADCNAALNIEPNNSVIYVNRGNVYRDIGAYQEAI 296

Query: 640 KDYDAALDLELDSMEKF-----VLQCLAFYQKEIALY 671
           KDYD AL +  +  + F     V  CL   +K I  Y
Sbjct: 297 KDYDQALQINSNEAKAFYNRGIVYSCLEDIKKAIDNY 333



 Score = 68.2 bits (165), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 4/217 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L+  +++  +G     ++  +  LK D    EA   RG  R  Q +   A+SDF EA+Q 
Sbjct: 178 LNEILSRFEKGNVQGVMADLNWALKVDKYDYEAYCFRGIIRYKQGDDFGAMSDFNEALQL 237

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           N  +  A++ RG  R  +G+   AI D + AL  EPN++ I   RG V      +  A++
Sbjct: 238 NNQSVLAYQYRGIVRGQIGDFKGAIADCNAALNIEPNNSVIYVNRGNVYRDIGAYQEAIK 297

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
           D    ++++     A+   G+  S + + KKA + +  A QL  +  E W +  +   +L
Sbjct: 298 DYDQALQINSNEAKAFYNRGIVYSCLEDIKKAIDNYQNAAQLFGD-AEDWNNYQKTLDNL 356

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQH 601
              + ++    Q +  D ++ +   L   LL  +G H
Sbjct: 357 KKIQTSVPIQSQNINEDTKYEQ---LEQKLLRMVGGH 390


>gi|186681165|ref|YP_001864361.1| hypothetical protein Npun_R0666 [Nostoc punctiforme PCC 73102]
 gi|186463617|gb|ACC79418.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
          Length = 532

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 144/320 (45%), Gaps = 6/320 (1%)

Query: 333 ISDNKSSDSTESRSK-LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISVD-----FRLS 386
           + +N +S   + R+K L ++   L   ++  +  KK     +    ++S+D        +
Sbjct: 146 LVENSNSSPPKQRTKELEYQVTSLINEADRLREAKKLEEAVVKYKAALSLDPNSVYAHNA 205

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
            G+    +GK + AI+ + + L+ DP Y  A    G A   Q +L  A++ +  A++ +P
Sbjct: 206 LGVVLHTQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRLDP 265

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  +     G A    G+  EAI    KAL+ +PN  +     G         + A+   
Sbjct: 266 NDADTHCNLGIALHDQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAY 325

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              +++D    SA+  LG+ L   G+  +A  A+ KA+Q+D N++ A  +L +       
Sbjct: 326 QRALRVDPNYASAHCNLGVTLYHQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGK 385

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+   Q+ L +D  ++ A+   G+ L+  G+  +AI      L +DP++ +      
Sbjct: 386 LSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEAIAAYQRALRLDPNDADTHCNLG 445

Query: 627 SCYHAIGEYREAIKDYDAAL 646
              H  G+  EAI  Y  AL
Sbjct: 446 IALHDQGKLSEAIAAYQRAL 465



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 112/237 (47%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   + GIA  ++GK + AI+ + + L+ DP Y  A    G A   Q +L  A++ +  A
Sbjct: 269 DTHCNLGIALHDQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRA 328

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           ++ +P+   A    G      G+  EAI    KAL+ +PN  +     G         + 
Sbjct: 329 LRVDPNYASAHCNLGVTLYHQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSE 388

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+      +++D    SA+  LG+ L   G+  +A  A+ +A++LD N  +   +L    
Sbjct: 389 AMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEAIAAYQRALRLDPNDADTHCNLGIAL 448

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
            D     +A+   Q+ L ID   + A+   G+ L G G+ ++AI +L   + ++P+N
Sbjct: 449 HDQGKLSEAIAAYQRALLIDPNDADAHCNLGIALKGQGKLEEAIAELEIAVRLNPNN 505



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 128/287 (44%), Gaps = 2/287 (0%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           V+   + G A   +GK + A++ + + L+ DP   +     G A   Q +L  AI+ + +
Sbjct: 234 VNAHCNLGKALHTQGKLSEAMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQK 293

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+Q +P+   A    G+A    G+  EA+    +AL  +PN A      G+  +     +
Sbjct: 294 ALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLS 353

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+      +++D    +A+  LG AL + G+  +A  A+ +A+++D N+  A  +L   
Sbjct: 354 EAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVT 413

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
                   +A+   Q+ L +D   +  +   G+ LH  G+  +AI      L IDP++ +
Sbjct: 414 LYHQGKLSEAIAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQRALLIDPNDAD 473

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKE 667
                       G+  EAI + + A  + L+     +   L  Y+ E
Sbjct: 474 AHCNLGIALKGQGKLEEAIAELEIA--VRLNPNNTVIRNNLEIYRNE 518



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 11/256 (4%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           KY +A+S+       DP    A    G     Q +L  AI+ + +A+Q +P+   A    
Sbjct: 188 KYKAALSL-------DPNSVYAHNALGVVLHTQGKLSEAIAAYQKALQIDPNYVNAHCNL 240

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G+A    G+  EA+    +AL  +PN AD     GI        + A+      +++D  
Sbjct: 241 GKALHTQGKLSEAMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQKALQIDPN 300

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
             +A+  LG AL + G+  +A  A+ +A+++D N+  A  +L           +A+   Q
Sbjct: 301 YVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKLSEAIAAYQ 360

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDP--SNIECLYLRASCYHAIG 633
           + L ID  +  A+   G  LH  G+  +A+      L +DP  ++  C  L  + YH  G
Sbjct: 361 KALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHC-NLGVTLYHQ-G 418

Query: 634 EYREAIKDYDAALDLE 649
           +  EAI  Y  AL L+
Sbjct: 419 KLSEAIAAYQRALRLD 434



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 101/242 (41%), Gaps = 31/242 (12%)

Query: 473 SKALEFEP----NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALS 528
           +K LE++     N AD L E        K    AV    A + LD  +  A+  LG+ L 
Sbjct: 159 TKELEYQVTSLINEADRLRE-------AKKLEEAVVKYKAALSLDPNSVYAHNALGVVLH 211

Query: 529 SIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAY 588
           + G+  +A  A+ KA+Q+D N++ A  +L +         +A+   Q+ L +D   +  +
Sbjct: 212 TQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRLDPNDADTH 271

Query: 589 HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC-----YHAIGEYREAIKDYD 643
              G+ LH  G+  +AI      L IDP+     Y+ A C      H  G+  EA+  Y 
Sbjct: 272 CNLGIALHDQGKLSEAIAAYQKALQIDPN-----YVNAHCNLGKALHTQGKLSEAMAAYQ 326

Query: 644 AALDLELDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWC---KR 700
            AL ++ +          A     + LY   K++     +     IDP +    C   K 
Sbjct: 327 RALRVDPNYAS-------AHCNLGVTLYHQGKLSEAIAAYQKALQIDPNYVNAHCNLGKA 379

Query: 701 LH 702
           LH
Sbjct: 380 LH 381


>gi|425460628|ref|ZP_18840109.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
           aeruginosa PCC 9808]
 gi|389826672|emb|CCI22671.1| Similar to tr|Q3M2C7|Q3M2C7_ANAVT TPR repeat [Microcystis
           aeruginosa PCC 9808]
          Length = 317

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/241 (24%), Positives = 117/241 (48%), Gaps = 5/241 (2%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           ++S+ + + +  GI Q+  G Y  A+  F+Q L+++     A   R   + + ++   A 
Sbjct: 42  AQSVHLSYWMRSGIEQLEAGNYQQALQDFNQSLEQENNLALAYSNRCLTKIYLQDYLHAW 101

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            D T ++Q       A+  RG A   LG+  +A+ D ++ +  +P      + RG+V   
Sbjct: 102 QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYSQALTDYNQTIWLKPTYYQAYYNRGLVQAA 161

Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            K++  A+ D +  ++     +     + Y   GL+  ++  +  A+    +A++L++N 
Sbjct: 162 MKNYPLALADFNQSLRQITNWQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNN 221

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +L      L   ++++  L Q + ID  ++ AY  RGLL H LG ++ A+ DL+ 
Sbjct: 222 ASAYYNLACTAHQLGEYDRSIAHLNQAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 281

Query: 611 G 611
           G
Sbjct: 282 G 282


>gi|434404177|ref|YP_007147062.1| hypothetical protein Cylst_2145 [Cylindrospermum stagnale PCC 7417]
 gi|428258432|gb|AFZ24382.1| hypothetical protein Cylst_2145 [Cylindrospermum stagnale PCC 7417]
          Length = 1225

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 119/271 (43%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+ Q   G    AI+ +DQ ++  P   +    RG           AI+++ +AI   P
Sbjct: 333 RGLQQARTGDLLGAIASYDQAIEFQPDISDYWFNRGLTLFHLEYFAEAIANYDQAIALKP 392

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
              +AW  RG  +  LG   EAI    KA++ + +       RG+   K    + A+   
Sbjct: 393 DFYKAWYNRGGIQGELGNFEEAIASFDKAIKIKSDYPAAWSSRGLALLKLGLLSEAISSY 452

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
              + L  ++   + Y G+AL+   +Y +A  ++ +A+ +  ++LE W        +L  
Sbjct: 453 DQALNLQPQDSENWYYRGVALAVDEQYAEAIASYDRALLIQPDYLEVWIDRGVVLFNLGR 512

Query: 567 SEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRA 626
             +A+E   + L I      A++ RG+ L  L + ++AI      + I        Y +A
Sbjct: 513 WLEAIESWDKALSIQPELYLAWYNRGIALDNLERREEAIASYEQAIAIKSDFHLAWYNQA 572

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV 657
                +  +  AI  YD+AL ++LD  E ++
Sbjct: 573 VALFYLERFEAAIASYDSALQIKLDYWEAWM 603



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 7/230 (3%)

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
           A+ +  + G+AW  RG  +A  G+ + AI    +A+EF+P+ +D    RG+  F  + F 
Sbjct: 319 ALVTATTQGQAWFYRGLQQARTGDLLGAIASYDQAIEFQPDISDYWFNRGLTLFHLEYFA 378

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+ +    + L  +   A+   G     +G +++A  +  KAI++  ++  AW      
Sbjct: 379 EAIANYDQAIALKPDFYKAWYNRGGIQGELGNFEEAIASFDKAIKIKSDYPAAWSSRGLA 438

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE 620
              L    +A+    Q L +  + S+ ++ RG+ L    Q+ +AI      L I P  +E
Sbjct: 439 LLKLGLLSEAISSYDQALNLQPQDSENWYYRGVALAVDEQYAEAIASYDRALLIQPDYLE 498

Query: 621 CLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQKEIAL 670
               R      +G + EAI+ +D AL ++ +         LA+Y + IAL
Sbjct: 499 VWIDRGVVLFNLGRWLEAIESWDKALSIQPE-------LYLAWYNRGIAL 541



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 4/209 (1%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG  Q   G +  AI+ FD+ +K    YP A   RG A      L  AIS + +A+   
Sbjct: 400 NRGGIQGELGNFEEAIASFDKAIKIKSDYPAAWSSRGLALLKLGLLSEAISSYDQALNLQ 459

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P   E W  RG A A   +  EAI    +AL  +P+  ++  +RG+V F    +  A+E 
Sbjct: 460 PQDSENWYYRGVALAVDEQYAEAIASYDRALLIQPDYLEVWIDRGVVLFNLGRWLEAIES 519

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGH--LTQFYQD 563
               + +  E   A+   G+AL ++   ++A  ++ +AI +  +F  AW +  +  FY  
Sbjct: 520 WDKALSIQPELYLAWYNRGIALDNLERREEAIASYEQAIAIKSDFHLAWYNQAVALFY-- 577

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRG 592
           L   E A+      L I   + +A+  RG
Sbjct: 578 LERFEAAIASYDSALQIKLDYWEAWMGRG 606


>gi|440754174|ref|ZP_20933376.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
 gi|440174380|gb|ELP53749.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
           TAIHU98]
          Length = 311

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 59/241 (24%), Positives = 115/241 (47%), Gaps = 5/241 (2%)

Query: 376 SKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAI 435
           ++S+ + + L  GI Q+  G Y  A+  F+Q L+ +     A   R     + ++   A 
Sbjct: 36  AQSVHLSYWLRSGIEQLEAGNYQQALQDFNQSLERENNLALAYSNRCLTEIYLQDYLHAW 95

Query: 436 SDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            D T ++Q       A+  RG A   LG+  +A+ D ++ +  +P      + RG+V   
Sbjct: 96  QDCTRSLQQQSDNYLAYFHRGLAFYRLGDYPQALTDYNQTIRLKPTYYQAYYNRGLVQSA 155

Query: 496 FKDFNAAVEDLSACVKLDKENK-----SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
            K++  A+ D +  ++     +     + Y   GL+  ++  +  A+    +A++L++N 
Sbjct: 156 RKNYPLALADFNQSLRQITNQQPDTLATIYNDRGLSHLALHNFTSAKADFNQALRLNKNN 215

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSS 610
             A+ +L      L   E+++  L + + ID  ++ AY  RGLL H LG ++ A+ DL+ 
Sbjct: 216 ASAYYNLACTAHQLGEYERSIAHLNRAIAIDPFYADAYIRRGLLRHQLGYYQSALADLNQ 275

Query: 611 G 611
           G
Sbjct: 276 G 276



 Score = 49.3 bits (116), Expect = 0.011,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 101/259 (38%), Gaps = 56/259 (21%)

Query: 452 WKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVK 511
           W R G  +   G   +A+QD +++LE E N A     R +     +D+  A +D +  ++
Sbjct: 44  WLRSGIEQLEAGNYQQALQDFNQSLERENNLALAYSNRCLTEIYLQDYLHAWQDCTRSLQ 103

Query: 512 LDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKAL 571
              +N  AY + GLA   +G+Y +A                    LT +           
Sbjct: 104 QQSDNYLAYFHRGLAFYRLGDYPQA--------------------LTDY----------- 132

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL----GIDPSNIECLYL-RA 626
               Q + +   + +AY+ RGL+      +  A+ D +  L       P  +  +Y  R 
Sbjct: 133 ---NQTIRLKPTYYQAYYNRGLVQSARKNYPLALADFNQSLRQITNQQPDTLATIYNDRG 189

Query: 627 SCYHAIGEYREAIKDYDAALDLELDSMEKFV-LQCLAF----YQKEIALYTASKINSEFC 681
             + A+  +  A  D++ AL L  ++   +  L C A     Y++ IA      +N    
Sbjct: 190 LSHLALHNFTSAKADFNQALRLNKNNASAYYNLACTAHQLGEYERSIA-----HLNRAIA 244

Query: 682 WFDIDGDIDPLFKEYWCKR 700
                  IDP + + + +R
Sbjct: 245 -------IDPFYADAYIRR 256


>gi|428300229|ref|YP_007138535.1| hypothetical protein Cal6303_3638 [Calothrix sp. PCC 6303]
 gi|428236773|gb|AFZ02563.1| Tetratricopeptide TPR_2 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 426

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 150/342 (43%), Gaps = 47/342 (13%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
             RG+ +  +  Y  AI  F Q L+ +P + +A + RG A     E+  A+SD+TEA++ 
Sbjct: 6   FQRGLEKAKQKDYVGAIQDFSQELQNNPYFSQAYLKRGLAYYDSGEVHRAVSDYTEALKL 65

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +P   EA+  R  AR  L      + D+ +A+    N A   + +GIV  K  + N A+ 
Sbjct: 66  DPQLIEAYYCRALARLILKNLPGTLDDVEQAIRLNSNYAAAYNLQGIVQRKQGNINQAIA 125

Query: 505 DLSACVKL-----DKENK-------------------SAYTYLGLALSSIGEY-----KK 535
                 +L     D EN                     +     L ++S  +Y     +K
Sbjct: 126 SFKKAAQLYLQQQDAENSRRCLESLKQLQPKPQIIPAPSPQNQPLTITSEADYFKQLIEK 185

Query: 536 AEEAHLK--------AIQLDRNFLEAW--GHLTQFYQDLANSEKALECLQQVLYIDKRFS 585
           AE  +++        A+Q+D    +A+    + ++ Q+  N  +A+    Q +  + + +
Sbjct: 186 AENGNIREALDSLSWALQVDSEDGKAYCCRGIIRYKQE--NYREAIADFNQAIKFNFQDA 243

Query: 586 KAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIE--CLYL-RASCYHAIGEYREAIKDY 642
             Y  RG     +G ++ AI D +  L I+P   E    Y+ R + Y ++G + EAI DY
Sbjct: 244 IVYRNRGKTRLQIGDNQGAISDFNQALNIEPEETENGMTYIARGNAYRSVGNHLEAITDY 303

Query: 643 DAALDLELDSMEKFVLQCLAFYQKE---IALYTASKINSEFC 681
           + AL++       ++ + LA+   E   +A+    K  S FC
Sbjct: 304 NKALEINPSHAHAYIHRGLAYTHIEEMKLAINDYQKAASIFC 345


>gi|428301371|ref|YP_007139677.1| hypothetical protein Cal6303_4807 [Calothrix sp. PCC 6303]
 gi|428237915|gb|AFZ03705.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
           PCC 6303]
          Length = 280

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/160 (34%), Positives = 81/160 (50%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           RG+  ++ G  ++AI+ ++Q LK DP   +A   RG   A Q    AAISD+  AI +NP
Sbjct: 99  RGLVHLDMGNKSAAIADYNQALKLDPNNFQAYNNRGNVYAAQGNGNAAISDYNLAITANP 158

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
           +  EA+  RG  RAA G+   AI D S+A+   P  A   + RG       D N A+ D 
Sbjct: 159 NYAEAYNNRGNTRAAQGDRNGAINDYSQAIALNPKYAIAHNNRGNARAAQGDRNGAIADY 218

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           +  + ++    +AY   G A  ++G+   A     KA QL
Sbjct: 219 NQAILINPNFAAAYNNRGNAYIALGDKPSAIADFQKAAQL 258



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 1/206 (0%)

Query: 371 TRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRE 430
           T  S + S + DF L RG    ++G    A++ +++ +  +P YP     RG        
Sbjct: 50  TTSSTNPSTARDFYL-RGQQLQSQGDLPGALAAYNRAITLNPNYPAVYNERGLVHLDMGN 108

Query: 431 LEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERG 490
             AAI+D+ +A++ +P+  +A+  RG   AA G    AI D + A+   PN A+  + RG
Sbjct: 109 KSAAIADYNQALKLDPNNFQAYNNRGNVYAAQGNGNAAISDYNLAITANPNYAEAYNNRG 168

Query: 491 IVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF 550
                  D N A+ D S  + L+ +   A+   G A ++ G+   A   + +AI ++ NF
Sbjct: 169 NTRAAQGDRNGAINDYSQAIALNPKYAIAHNNRGNARAAQGDRNGAIADYNQAILINPNF 228

Query: 551 LEAWGHLTQFYQDLANSEKALECLQQ 576
             A+ +    Y  L +   A+   Q+
Sbjct: 229 AAAYNNRGNAYIALGDKPSAIADFQK 254



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/205 (25%), Positives = 94/205 (45%)

Query: 444 SNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAV 503
           +NPS    +  RGQ   + G+   A+   ++A+   PN   + +ERG+V+    + +AA+
Sbjct: 54  TNPSTARDFYLRGQQLQSQGDLPGALAAYNRAITLNPNYPAVYNERGLVHLDMGNKSAAI 113

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
            D +  +KLD  N  AY   G   ++ G    A   +  AI  + N+ EA+ +       
Sbjct: 114 ADYNQALKLDPNNFQAYNNRGNVYAAQGNGNAAISDYNLAITANPNYAEAYNNRGNTRAA 173

Query: 564 LANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLY 623
             +   A+    Q + ++ +++ A++ RG      G    AI D +  + I+P+      
Sbjct: 174 QGDRNGAINDYSQAIALNPKYAIAHNNRGNARAAQGDRNGAIADYNQAILINPNFAAAYN 233

Query: 624 LRASCYHAIGEYREAIKDYDAALDL 648
            R + Y A+G+   AI D+  A  L
Sbjct: 234 NRGNAYIALGDKPSAIADFQKAAQL 258



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/133 (33%), Positives = 67/133 (50%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG     +G   +AIS ++  +  +P Y EA   RG  RA Q +   AI+D+++AI  N
Sbjct: 132 NRGNVYAAQGNGNAAISDYNLAITANPNYAEAYNNRGNTRAAQGDRNGAINDYSQAIALN 191

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A   RG ARAA G+   AI D ++A+   PN A   + RG       D  +A+ D
Sbjct: 192 PKYAIAHNNRGNARAAQGDRNGAIADYNQAILINPNFAAAYNNRGNAYIALGDKPSAIAD 251

Query: 506 LSACVKLDKENKS 518
                +L +E K+
Sbjct: 252 FQKAAQLFQEQKN 264


>gi|404366637|ref|ZP_10972019.1| hypothetical protein FUAG_01830 [Fusobacterium ulcerans ATCC 49185]
 gi|313689480|gb|EFS26315.1| hypothetical protein FUAG_01830 [Fusobacterium ulcerans ATCC 49185]
          Length = 559

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 107/214 (50%)

Query: 435 ISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNF 494
           I +  E I+ NP+    +  RG     L +  EA+ D +KA+E +PN+A   + RG  N 
Sbjct: 12  IEELNEKIRLNPNNANFYNSRGNCNYFLKKYEEAVIDYNKAIELDPNNAVYYNLRGNCNH 71

Query: 495 KFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAW 554
             K +  A+ D +  ++LD  N + Y   G    S+ +Y+ A   + KAI+++ N    +
Sbjct: 72  FLKKYKEAIIDYNKAIELDPNNATYYNNRGKTKYSLEDYENAIIDYNKAIEVNPNEEIYY 131

Query: 555 GHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGI 614
            +      +L N ++AL+  +  + ++   +  Y+ RG + + L  +KKAIKD    L +
Sbjct: 132 IYCGICNYNLKNYKEALKNFENAIQLNPNNATYYNNRGKIKYFLEDYKKAIKDYDKALEL 191

Query: 615 DPSNIECLYLRASCYHAIGEYREAIKDYDAALDL 648
           +P        RA   + +  Y++A+ D + A++L
Sbjct: 192 NPYAAITYKNRAESKYMLENYKDALIDINKAIEL 225



 Score = 53.1 bits (126), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 74/153 (48%), Gaps = 5/153 (3%)

Query: 366 KKFCVTRISKSKSISVD-----FRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           KK+    I  +K+I +D     +  +RG  + +   Y +AI  +++ ++ +P      I 
Sbjct: 74  KKYKEAIIDYNKAIELDPNNATYYNNRGKTKYSLEDYENAIIDYNKAIEVNPNEEIYYIY 133

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
            G      +  + A+ +F  AIQ NP+    +  RG+ +  L +  +AI+D  KALE  P
Sbjct: 134 CGICNYNLKNYKEALKNFENAIQLNPNNATYYNNRGKIKYFLEDYKKAIKDYDKALELNP 193

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            +A     R    +  +++  A+ D++  ++L+
Sbjct: 194 YAAITYKNRAESKYMLENYKDALIDINKAIELN 226



 Score = 49.7 bits (117), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 49/81 (60%)

Query: 569 KALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASC 628
           K +E L + + ++   +  Y+ RG   + L ++++A+ D +  + +DP+N     LR +C
Sbjct: 10  KEIEELNEKIRLNPNNANFYNSRGNCNYFLKKYEEAVIDYNKAIELDPNNAVYYNLRGNC 69

Query: 629 YHAIGEYREAIKDYDAALDLE 649
            H + +Y+EAI DY+ A++L+
Sbjct: 70  NHFLKKYKEAIIDYNKAIELD 90


>gi|428306433|ref|YP_007143258.1| hypothetical protein Cri9333_2909 [Crinalium epipsammum PCC 9333]
 gi|428247968|gb|AFZ13748.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
           epipsammum PCC 9333]
          Length = 509

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 120/254 (47%), Gaps = 8/254 (3%)

Query: 379 ISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDF 438
           I  DF +S+        +Y +A+  +DQ LK +P Y  A + +G+     +  + A+S++
Sbjct: 241 IGNDFYISQ--------QYEAALKGYDQALKIEPKYVLAWLYKGSLLLELKRYQEAVSNY 292

Query: 439 TEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKD 498
             A+Q  P +  A   RG A   + +  EAI    KA++ +PN+ ++   R     K + 
Sbjct: 293 DRALQFKPDSTVALSNRGLALDHIQKYEEAIASFDKAIKLQPNAPEVWTGRCYALAKLQK 352

Query: 499 FNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLT 558
           +  A+      +K+  E   A+   G  L+ + +Y +A  +  KAI+ + N  EAW +  
Sbjct: 353 YQDAIASCEVAIKIQPEYSDAWNNRGYVLNQVQQYDQALLSFEKAIEFEPNNAEAWANKG 412

Query: 559 QFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSN 618
                L  + +A+    Q + +   +++A++ RG  L  L + K A+   +  + + P+ 
Sbjct: 413 LALDHLQQNAEAIAAYDQAIKLQPNYAQAWYGRGNALFSLNKPKDALAAYNKAISLKPNY 472

Query: 619 IECLYLRASCYHAI 632
            + L  +++   A+
Sbjct: 473 QQALNSKSAVLAAL 486



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 101/207 (48%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           +Y  A+S +D+ L+  P    AL  RG A    ++ E AI+ F +AI+  P+A E W  R
Sbjct: 284 RYQEAVSNYDRALQFKPDSTVALSNRGLALDHIQKYEEAIASFDKAIKLQPNAPEVWTGR 343

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
             A A L +  +AI     A++ +P  +D  + RG V  + + ++ A+      ++ +  
Sbjct: 344 CYALAKLQKYQDAIASCEVAIKIQPEYSDAWNNRGYVLNQVQQYDQALLSFEKAIEFEPN 403

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           N  A+   GLAL  + +  +A  A+ +AI+L  N+ +AW         L   + AL    
Sbjct: 404 NAEAWANKGLALDHLQQNAEAIAAYDQAIKLQPNYAQAWYGRGNALFSLNKPKDALAAYN 463

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           + + +   + +A + +  +L  L +++
Sbjct: 464 KAISLKPNYQQALNSKSAVLAALQRNQ 490



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 105/221 (47%)

Query: 429 RELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHE 488
           ++ EAA+  + +A++  P    AW  +G     L    EA+ +  +AL+F+P+S   L  
Sbjct: 249 QQYEAALKGYDQALKIEPKYVLAWLYKGSLLLELKRYQEAVSNYDRALQFKPDSTVALSN 308

Query: 489 RGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDR 548
           RG+     + +  A+      +KL       +T    AL+ + +Y+ A  +   AI++  
Sbjct: 309 RGLALDHIQKYEEAIASFDKAIKLQPNAPEVWTGRCYALAKLQKYQDAIASCEVAIKIQP 368

Query: 549 NFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDL 608
            + +AW +       +   ++AL   ++ +  +   ++A+  +GL L  L Q+ +AI   
Sbjct: 369 EYSDAWNNRGYVLNQVQQYDQALLSFEKAIEFEPNNAEAWANKGLALDHLQQNAEAIAAY 428

Query: 609 SSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLE 649
              + + P+  +  Y R +   ++ + ++A+  Y+ A+ L+
Sbjct: 429 DQAIKLQPNYAQAWYGRGNALFSLNKPKDALAAYNKAISLK 469


>gi|83814061|ref|YP_446792.1| hypothetical protein SRU_2700 [Salinibacter ruber DSM 13855]
 gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
          Length = 554

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 127/313 (40%), Gaps = 34/313 (10%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++ GI   + G+   A+  +D+ L  +P++ EAL   G       +LEAA+  F      
Sbjct: 194 INLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADV 253

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   E W   G     LGE  ++++     L+ +P S D  + RGIV  +   F  AVE
Sbjct: 254 YPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVE 313

Query: 505 ---------------------------DLSACVK-----LDKENKSAYTYLGLALS--SI 530
                                      DL A V+     L+ E   A TY  LAL+    
Sbjct: 314 SYDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQ 373

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G+ + A   + K + L  N+ EAW  L   +      E+ALEC +  + +D    K +  
Sbjct: 374 GDLRAARTYYEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTA 433

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           R    + +G+  +A++     + +D SN       A       +  EA++ Y  AL+L+ 
Sbjct: 434 RADCAYKVGKLDEALESYQHAVRLDESNEHAWTGYAETLLEKEQPEEALEAYRQALELDP 493

Query: 651 DSMEKFVLQCLAF 663
            S   +  Q  A 
Sbjct: 494 KSANTYFRQAKAL 506



 Score = 76.6 bits (187), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 109/255 (42%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           EG+  +A+ + D++++  P   +A + RG         E A+  + +A+  NP+  E   
Sbjct: 135 EGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLI 194

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
             G    +LG   EA++   +AL   P   + L   G+   + +   AAVE    C  + 
Sbjct: 195 NLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVY 254

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            E+   +  LG     +GE +K+ EA+   + +D    +AW +       L    +A+E 
Sbjct: 255 PEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVES 314

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
               L I   F+ AY+ RG      G  + A++     L ++  +    Y  A  Y   G
Sbjct: 315 YDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQG 374

Query: 634 EYREAIKDYDAALDL 648
           + R A   Y+  LDL
Sbjct: 375 DLRAARTYYEKTLDL 389



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 101/237 (42%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E+E A+      I+ +P   +AW RRG     LG   EA++   +AL+  P   + L   
Sbjct: 137 EMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINL 196

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           GI        + A+E     + ++  +  A   LG+ L    + + A EA  +   +   
Sbjct: 197 GITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPE 256

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             E W  L   Y  L   EK++E     L ID     A++ RG++L+ LG+  +A++   
Sbjct: 257 HPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYD 316

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
             L I        Y R +     G+   A++ Y+  L+LE      +    LA+ ++
Sbjct: 317 MALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQ 373



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 14/248 (5%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S D   +RGI     G++  A+  +D  L     +  A   RG A A Q +LEAA+  + 
Sbjct: 291 SKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYE 350

Query: 440 EAIQ-SNPSAGE------AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
             ++   P A        A++ +G  RAA            K L+ + N  +  +  G  
Sbjct: 351 RVLELEGPDAATYYNLALAYEEQGDLRAAR-------TYYEKTLDLKSNYPEAWYGLGCC 403

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
               +    A+E     V LD      +T        +G+  +A E++  A++LD +   
Sbjct: 404 FDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHAVRLDESNEH 463

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           AW    +   +    E+ALE  +Q L +D + +  Y  +   L  LG+  ++I+ L +  
Sbjct: 464 AWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALKTAF 523

Query: 613 GIDPSNIE 620
            +DP+  E
Sbjct: 524 RLDPAKKE 531



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 11/225 (4%)

Query: 467 EAIQDLSKALEFEP----NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           + ++DL  A E +P    +S D L E     F+  +   A+E +   ++L      A+  
Sbjct: 103 DPLEDLVAAYENDPSAYFDSGD-LEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMR 161

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            G+ L+++G  ++A EA+ +A+ ++    E   +L      L   ++ALE   + L I+ 
Sbjct: 162 RGILLNNLGRPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINP 221

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
              +A    G+ L    Q + A++       + P + E  Y    CY  +GE  ++++ Y
Sbjct: 222 LHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGEDEKSVEAY 281

Query: 643 DAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKINSEFC 681
           D  LD++  S + +     VL  L  + + +  Y  A  I+ EF 
Sbjct: 282 DNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFA 326


>gi|307153690|ref|YP_003889074.1| hypothetical protein Cyan7822_3868 [Cyanothece sp. PCC 7822]
 gi|306983918|gb|ADN15799.1| TPR repeat-containing protein [Cyanothece sp. PCC 7822]
          Length = 275

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 30/223 (13%)

Query: 433 AAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
            AI+DFT+AI   P+  +A+  R  A   LG+  +A+ D S+AL+  PN       R  V
Sbjct: 56  GAIADFTQAIALAPNDPDAYYNRAYAYLILGDFEKAVADYSQALQINPNYTYAYGNRCYV 115

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
            F  K + AA+ D    + L  +    Y Y G A S + + ++A   + KAI L      
Sbjct: 116 YFLSKKYEAAITDCDKAISLQADYADFYIYRGNAKSELNQNQEALSDYEKAISL------ 169

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
                       AN+ K               +KA++ RG     L  HK+AI D +  +
Sbjct: 170 -----------AANNPKTR-------------AKAFYNRGRTYQSLENHKQAIADYTDSI 205

Query: 613 GIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEK 655
            ++P + +  Y RA+ Y+A+G  +EA+ D + A  L  D  +K
Sbjct: 206 ALNPDDGDAYYNRAASYYALGNNQEAMVDLEIAARLFTDQAKK 248



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 84/190 (44%), Gaps = 4/190 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           + G+ +++   Y  AI+ F Q +   P  P+A   R  A     + E A++D+++A+Q N
Sbjct: 43  NNGVDKLSAANYTGAIADFTQAIALAPNDPDAYYNRAYAYLILGDFEKAVADYSQALQIN 102

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  R        +   AI D  KA+  + + AD    RG    +      A+ D
Sbjct: 103 PNYTYAYGNRCYVYFLSKKYEAAITDCDKAISLQADYADFYIYRGNAKSELNQNQEALSD 162

Query: 506 LSACVKLDKEN----KSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
               + L   N      A+   G    S+  +K+A   +  +I L+ +  +A+ +    Y
Sbjct: 163 YEKAISLAANNPKTRAKAFYNRGRTYQSLENHKQAIADYTDSIALNPDDGDAYYNRAASY 222

Query: 562 QDLANSEKAL 571
             L N+++A+
Sbjct: 223 YALGNNQEAM 232



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 4/159 (2%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D   +R  A +  G +  A++ + Q L+ +P Y  A   R       ++ EAAI+D  +A
Sbjct: 73  DAYYNRAYAYLILGDFEKAVADYSQALQINPNYTYAYGNRCYVYFLSKKYEAAITDCDKA 132

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNS----ADILHERGIVNFKFK 497
           I       + +  RG A++ L ++ EA+ D  KA+    N+    A   + RG      +
Sbjct: 133 ISLQADYADFYIYRGNAKSELNQNQEALSDYEKAISLAANNPKTRAKAFYNRGRTYQSLE 192

Query: 498 DFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
           +   A+ D +  + L+ ++  AY     +  ++G  ++A
Sbjct: 193 NHKQAIADYTDSIALNPDDGDAYYNRAASYYALGNNQEA 231



 Score = 42.0 bits (97), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 9/120 (7%)

Query: 365 NKKFCVTRISKSKSISV-----DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPE--- 416
           +KK+        K+IS+     DF + RG A+    +   A+S +++ +      P+   
Sbjct: 119 SKKYEAAITDCDKAISLQADYADFYIYRGNAKSELNQNQEALSDYEKAISLAANNPKTRA 178

Query: 417 -ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
            A   RG         + AI+D+T++I  NP  G+A+  R  +  ALG + EA+ DL  A
Sbjct: 179 KAFYNRGRTYQSLENHKQAIADYTDSIALNPDDGDAYYNRAASYYALGNNQEAMVDLEIA 238



 Score = 40.4 bits (93), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/56 (39%), Positives = 31/56 (55%)

Query: 74  NRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKG 129
           NR + Y   + ++  I DCDKA+ L       YI +G A S L + +EALS +EK 
Sbjct: 111 NRCYVYFLSKKYEAAITDCDKAISLQADYADFYIYRGNAKSELNQNQEALSDYEKA 166


>gi|298248115|ref|ZP_06971920.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297550774|gb|EFH84640.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 652

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/289 (22%), Positives = 128/289 (44%), Gaps = 1/289 (0%)

Query: 368 FCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAF 427
            C   I      +V + L +GI      +   A+  ++Q ++ DP   E    +G     
Sbjct: 337 LCERAIQDEPVEAVSYSL-KGIILGKLRRQEEALQAYEQAIRLDPTSAEVYGNKGLLLRR 395

Query: 428 QRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILH 487
              +E A++ + +AI  +P+   A+  +G A   L    EA+    +A++  P  A+I  
Sbjct: 396 LNRMEEALAAYEQAIHIDPTHVSAYFGKGMALQKLKRDEEALPVFEQAIQLNPTDANIHF 455

Query: 488 ERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLD 547
            +G           A+      + L+    SAY++ G+ L ++G +++A EA  ++I+LD
Sbjct: 456 LKGCSLEMLGRAEEALTAFEQVIHLEPTRISAYSHKGILLRTLGRHEEALEAFEQSIRLD 515

Query: 548 RNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKD 607
               +A+    +    L   E+ALE  +Q + ++ + +  Y  +GL L GL   ++A+ +
Sbjct: 516 PTNADAYQAKGEVLDTLGRLEEALEAFEQSIRLNPKDASVYFSKGLTLWGLKHMEEALAN 575

Query: 608 LSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
               + +DP N      +      IG   EA+   + A+ L  +  E +
Sbjct: 576 FEYAIQLDPKNATFYRTKGILLRIIGHNEEALTALEYAVQLRPNDAEAY 624



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 16/257 (6%)

Query: 400 AISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQAR 459
           A++ ++Q +  DP +  A  G+G A    +  E A+  F +AIQ NP+       +G + 
Sbjct: 402 ALAAYEQAIHIDPTHVSAYFGKGMALQKLKRDEEALPVFEQAIQLNPTDANIHFLKGCSL 461

Query: 460 AALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSA 519
             LG + EA+    + +  EP        +GI+         A+E     ++LD  N  A
Sbjct: 462 EMLGRAEEALTAFEQVIHLEPTRISAYSHKGILLRTLGRHEEALEAFEQSIRLDPTNADA 521

Query: 520 YTYLGLALSSIGEYKKAEEAHLKAIQLD--------RNFLEAWGHLTQFYQDLANSEKAL 571
           Y   G  L ++G  ++A EA  ++I+L+           L  WG L    + LAN E A+
Sbjct: 522 YQAKGEVLDTLGRLEEALEAFEQSIRLNPKDASVYFSKGLTLWG-LKHMEEALANFEYAI 580

Query: 572 ECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHA 631
           +       +D + +  Y  +G+LL  +G +++A+  L   + + P++ E    +      
Sbjct: 581 Q-------LDPKNATFYRTKGILLRIIGHNEEALTALEYAVQLRPNDAEAYQNKGYALEK 633

Query: 632 IGEYREAIKDYDAALDL 648
           +G   EA + Y  A +L
Sbjct: 634 LGRMSEAHQAYQKAHEL 650



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/254 (19%), Positives = 118/254 (46%)

Query: 396 KYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRR 455
           ++  A+ + ++ ++++P+   +   +G      R  E A+  + +AI+ +P++ E +  +
Sbjct: 330 RHEEALVLCERAIQDEPVEAVSYSLKGIILGKLRRQEEALQAYEQAIRLDPTSAEVYGNK 389

Query: 456 GQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKE 515
           G     L    EA+    +A+  +P        +G+   K K    A+      ++L+  
Sbjct: 390 GLLLRRLNRMEEALAAYEQAIHIDPTHVSAYFGKGMALQKLKRDEEALPVFEQAIQLNPT 449

Query: 516 NKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQ 575
           + + +   G +L  +G  ++A  A  + I L+   + A+ H     + L   E+ALE  +
Sbjct: 450 DANIHFLKGCSLEMLGRAEEALTAFEQVIHLEPTRISAYSHKGILLRTLGRHEEALEAFE 509

Query: 576 QVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEY 635
           Q + +D   + AY  +G +L  LG+ ++A++     + ++P +    + +      +   
Sbjct: 510 QSIRLDPTNADAYQAKGEVLDTLGRLEEALEAFEQSIRLNPKDASVYFSKGLTLWGLKHM 569

Query: 636 REAIKDYDAALDLE 649
            EA+ +++ A+ L+
Sbjct: 570 EEALANFEYAIQLD 583



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 12/198 (6%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           G+   A++ F+Q++  +P    A   +G   R   R  E A+  F ++I+ +P+  +A++
Sbjct: 465 GRAEEALTAFEQVIHLEPTRISAYSHKGILLRTLGRH-EEALEAFEQSIRLDPTNADAYQ 523

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            +G+    LG   EA++   +++   P  A +   +G+  +  K    A+ +    ++LD
Sbjct: 524 AKGEVLDTLGRLEEALEAFEQSIRLNPKDASVYFSKGLTLWGLKHMEEALANFEYAIQLD 583

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            +N + Y   G+ L  IG  ++A  A   A+QL  N  EA+           N   ALE 
Sbjct: 584 PKNATFYRTKGILLRIIGHNEEALTALEYAVQLRPNDAEAY----------QNKGYALEK 633

Query: 574 LQQVLYIDKRFSKAYHLR 591
           L ++    + + KA+ LR
Sbjct: 634 LGRMSEAHQAYQKAHELR 651



 Score = 43.9 bits (102), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 15/116 (12%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +L+ + +AIR LD   A+ Y      N+     +L   +  +   ++A+ +DPT + AY 
Sbjct: 368 ALQAYEQAIR-LDPTSAEVY-----GNKGLLLRRLNRMEEALAAYEQAIHIDPTHVSAYF 421

Query: 108 LKGCAFSALGRKEEALSVWEKGYE--------HALHQSADLKQFLELEELLTAAKQ 155
            KG A   L R EEAL V+E+  +        H L +   L+     EE LTA +Q
Sbjct: 422 GKGMALQKLKRDEEALPVFEQAIQLNPTDANIHFL-KGCSLEMLGRAEEALTAFEQ 476


>gi|294508725|ref|YP_003572784.1| hypothetical protein SRM_02912 [Salinibacter ruber M8]
 gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
           ruber M8]
          Length = 554

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 127/313 (40%), Gaps = 34/313 (10%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           ++ GI   + G+   A+  +D+ L  +P++ EAL   G       +LEAA+  F      
Sbjct: 194 INLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADV 253

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
            P   E W   G     LGE  ++++     L+ +P S D  + RGIV  +   F  AVE
Sbjct: 254 YPEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVE 313

Query: 505 ---------------------------DLSACVK-----LDKENKSAYTYLGLALS--SI 530
                                      DL A V+     L+ E   A TY  LAL+    
Sbjct: 314 SYDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQ 373

Query: 531 GEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHL 590
           G+ + A   + K + L  N+ EAW  L   +      E+ALEC +  + +D    K +  
Sbjct: 374 GDLRAARTYYEKTLDLKSNYPEAWYGLGCCFDTDERPEEALECFRYAVNLDANVPKFWTA 433

Query: 591 RGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLEL 650
           R    + +G+  +A++     + +D SN       A       +  EA++ Y  AL+L+ 
Sbjct: 434 RADCAYKVGKLDEALESYQHAVRLDESNEHAWTGYAETLLEKEQPEEALEAYRQALELDP 493

Query: 651 DSMEKFVLQCLAF 663
            S   +  Q  A 
Sbjct: 494 KSANTYFRQAKAL 506



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 109/255 (42%)

Query: 394 EGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           EG+  +A+ + D++++  P   +A + RG         E A+  + +A+  NP+  E   
Sbjct: 135 EGEMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLI 194

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
             G    +LG   EA++   +AL   P   + L   G+   + +   AAVE    C  + 
Sbjct: 195 NLGITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVY 254

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
            E+   +  LG     +GE +K+ EA+   + +D    +AW +       L    +A+E 
Sbjct: 255 PEHPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVES 314

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
               L I   F+ AY+ RG      G  + A++     L ++  +    Y  A  Y   G
Sbjct: 315 YDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQG 374

Query: 634 EYREAIKDYDAALDL 648
           + R A   Y+  LDL
Sbjct: 375 DLRAARTYYEKTLDL 389



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 101/237 (42%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           E+E A+      I+ +P   +AW RRG     LG   EA++   +AL+  P   + L   
Sbjct: 137 EMETALEVIDRLIELHPYTSDAWMRRGILLNNLGRPEEALEAYEQALDVNPTDTETLINL 196

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
           GI        + A+E     + ++  +  A   LG+ L    + + A EA  +   +   
Sbjct: 197 GITLDSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPE 256

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLS 609
             E W  L   Y  L   EK++E     L ID     A++ RG++L+ LG+  +A++   
Sbjct: 257 HPEVWYELGYCYDRLGEDEKSVEAYDNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYD 316

Query: 610 SGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAFYQK 666
             L I        Y R +     G+   A++ Y+  L+LE      +    LA+ ++
Sbjct: 317 MALAIHDEFASAYYNRGNAEANQGDLEAAVESYERVLELEGPDAATYYNLALAYEEQ 373



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 14/248 (5%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           S D   +RGI     G++  A+  +D  L     +  A   RG A A Q +LEAA+  + 
Sbjct: 291 SKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFASAYYNRGNAEANQGDLEAAVESYE 350

Query: 440 EAIQ-SNPSAGE------AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIV 492
             ++   P A        A++ +G  RAA            K L+ + N  +  +  G  
Sbjct: 351 RVLELEGPDAATYYNLALAYEEQGDLRAAR-------TYYEKTLDLKSNYPEAWYGLGCC 403

Query: 493 NFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLE 552
               +    A+E     V LD      +T        +G+  +A E++  A++LD +   
Sbjct: 404 FDTDERPEEALECFRYAVNLDANVPKFWTARADCAYKVGKLDEALESYQHAVRLDESNEH 463

Query: 553 AWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGL 612
           AW    +   +    E+ALE  +Q L +D + +  Y  +   L  LG+  ++I+ L +  
Sbjct: 464 AWTGYAETLLEKEQPEEALEAYRQALELDPKSANTYFRQAKALLALGRADESIRALKTAF 523

Query: 613 GIDPSNIE 620
            +DP+  E
Sbjct: 524 RLDPAKKE 531



 Score = 51.6 bits (122), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 102/225 (45%), Gaps = 11/225 (4%)

Query: 467 EAIQDLSKALEFEP----NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTY 522
           + ++DL  A E +P    +S D L E     F+  +   A+E +   ++L      A+  
Sbjct: 103 DPLEDLVAAYENDPSAYFDSGD-LEEIASFYFEEGEMETALEVIDRLIELHPYTSDAWMR 161

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
            G+ L+++G  ++A EA+ +A+ ++    E   +L      L   ++ALE   + L I+ 
Sbjct: 162 RGILLNNLGRPEEALEAYEQALDVNPTDTETLINLGITLDSLGRVDEALEAYDEALSINP 221

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
              +A    G+ L    Q + A++       + P + E  Y    CY  +GE  ++++ Y
Sbjct: 222 LHGEALFNLGVTLERDEQLEAAVEAFQRCADVYPEHPEVWYELGYCYDRLGEDEKSVEAY 281

Query: 643 DAALDLELDSMEKF-----VLQCLAFYQKEIALY-TASKINSEFC 681
           D  LD++  S + +     VL  L  + + +  Y  A  I+ EF 
Sbjct: 282 DNHLDIDPYSKDAWYNRGIVLNRLGRFGEAVESYDMALAIHDEFA 326


>gi|359460421|ref|ZP_09248984.1| hypothetical protein ACCM5_16968 [Acaryochloris sp. CCMEE 5410]
          Length = 263

 Score = 85.9 bits (211), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 1/194 (0%)

Query: 416 EALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKA 475
           + L+  G  +A +   + AIS + +AIQSNP    A+  RG A   LG+   AI D ++A
Sbjct: 41  QTLLQSGREKAKRGNYQEAISIYNQAIQSNPRNTSAYIYRGLAYHDLGDYQGAIADFNRA 100

Query: 476 LEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSI-GEYK 534
           LE EP+ A  L+ RG       DF  A+ DL+  ++L      AY    +   ++ G+++
Sbjct: 101 LEIEPDHAIALYNRGESRSDIGDFEGAIIDLTQAIRLKPNYAEAYNIRAIIFGAVQGQWE 160

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
           KA +   +AI    +F +A+ +  + Y  + ++  A+    + + ++   ++AY  RG++
Sbjct: 161 KALKDLNQAILFRPDFADAYYNRGRTYAAMRDATNAIANYTKAIELNAELAEAYGNRGMI 220

Query: 595 LHGLGQHKKAIKDL 608
               G  + AI DL
Sbjct: 221 KAQTGDKQGAIVDL 234



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 3/220 (1%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           L  G  +   G Y  AISI++Q ++ +P    A I RG A     + + AI+DF  A++ 
Sbjct: 44  LQSGREKAKRGNYQEAISIYNQAIQSNPRNTSAYIYRGLAYHDLGDYQGAIADFNRALEI 103

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFK-DFNAAV 503
            P    A   RG++R+ +G+   AI DL++A+  +PN A+  + R I+    +  +  A+
Sbjct: 104 EPDHAIALYNRGESRSDIGDFEGAIIDLTQAIRLKPNYAEAYNIRAIIFGAVQGQWEKAL 163

Query: 504 EDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQD 563
           +DL+  +    +   AY   G   +++ +   A   + KAI+L+    EA+G+       
Sbjct: 164 KDLNQAILFRPDFADAYYNRGRTYAAMRDATNAIANYTKAIELNAELAEAYGNRGMIKAQ 223

Query: 564 LANSEKALECLQQV--LYIDKRFSKAYHLRGLLLHGLGQH 601
             + + A+  L+    L+ ++     Y    L++H + Q 
Sbjct: 224 TGDKQGAIVDLRHAANLFKEQGNQGNYQQTLLMIHQVEQQ 263



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 1/183 (0%)

Query: 475 ALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYK 534
           A+      A  L + G    K  ++  A+   +  ++ +  N SAY Y GLA   +G+Y+
Sbjct: 32  AISAPSEPAQTLLQSGREKAKRGNYQEAISIYNQAIQSNPRNTSAYIYRGLAYHDLGDYQ 91

Query: 535 KAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLL 594
            A     +A++++ +   A  +  +   D+ + E A+  L Q + +   +++AY++R ++
Sbjct: 92  GAIADFNRALEIEPDHAIALYNRGESRSDIGDFEGAIIDLTQAIRLKPNYAEAYNIRAII 151

Query: 595 LHGL-GQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
              + GQ +KA+KDL+  +   P   +  Y R   Y A+ +   AI +Y  A++L  +  
Sbjct: 152 FGAVQGQWEKALKDLNQAILFRPDFADAYYNRGRTYAAMRDATNAIANYTKAIELNAELA 211

Query: 654 EKF 656
           E +
Sbjct: 212 EAY 214



 Score = 52.8 bits (125), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 50/99 (50%)

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
            N ++A+    Q +  + R + AY  RGL  H LG ++ AI D +  L I+P +   LY 
Sbjct: 54  GNYQEAISIYNQAIQSNPRNTSAYIYRGLAYHDLGDYQGAIADFNRALEIEPDHAIALYN 113

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           R      IG++  AI D   A+ L+ +  E + ++ + F
Sbjct: 114 RGESRSDIGDFEGAIIDLTQAIRLKPNYAEAYNIRAIIF 152


>gi|145515088|ref|XP_001443449.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410827|emb|CAK76052.1| unnamed protein product [Paramecium tetraurelia]
          Length = 736

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/322 (23%), Positives = 151/322 (46%), Gaps = 17/322 (5%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G+   A + + Q +  DP +  A   R      Q++ + A++D  + I+ +P   +A+  
Sbjct: 65  GQTEKAFNDYQQAIDLDPQFINAYFNRALLYQKQKKYQEALNDLDKIIELDPKNAQAFNS 124

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERG------IVNFKFKDF---NAAVED 505
           RG     L +  EA+ D + +L  +PN+++  + RG      + N  F D      A+ D
Sbjct: 125 RGNIYHDLEKDKEAMIDFNTSLLLDPNNSNTYNNRGQFTVITLANL-FSDQGLDQEALND 183

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
            +  + LD ++ + Y   G+        ++A     KAI+L+   +EA+      +++L 
Sbjct: 184 YNKSILLDPQSSNKYCNRGVLFRKQERNQEALNDFNKAIELNNQNVEAYNSRGILFKELN 243

Query: 566 NSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLR 625
             ++A +   +   ++ ++  + + RG L + LGQ +KA+KD    L  + ++ +    R
Sbjct: 244 KMDEAFKDYNKATDLNPKYVNSLYNRGNLYYNLGQKEKALKDYMLVLERNQAHSDTYNSR 303

Query: 626 ASCYHAIGEYREAIKDYDAALDLE-LDSMEKFVLQCLAFYQKEIALYTASKINSEFCWFD 684
            + Y   G+   AIKDY+ A+++  L+ +    L  L ++QK+   Y  +K         
Sbjct: 304 GNLYMNDGKIELAIKDYNKAIEINPLNPLYLTNLGSLYYHQKD---YIKAKNFFSLAQGC 360

Query: 685 IDGDIDPLFKEYWCKRLHPKNV 706
           ++  ID  FK   C+ L P N+
Sbjct: 361 LEQIIDSKFK---CRNLSPANI 379



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 10/263 (3%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTA-RAFQRELEAAISDFTEAIQ 443
            +R +    + KY  A++  D+I++ DP   +A   RG      +++ EA I DF  ++ 
Sbjct: 89  FNRALLYQKQKKYQEALNDLDKIIELDPKNAQAFNSRGNIYHDLEKDKEAMI-DFNTSLL 147

Query: 444 SNPSAGEAWKRRGQARAAL--------GESVEAIQDLSKALEFEPNSADILHERGIVNFK 495
            +P+    +  RGQ             G   EA+ D +K++  +P S++    RG++  K
Sbjct: 148 LDPNNSNTYNNRGQFTVITLANLFSDQGLDQEALNDYNKSILLDPQSSNKYCNRGVLFRK 207

Query: 496 FKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWG 555
            +    A+ D +  ++L+ +N  AY   G+    + +  +A + + KA  L+  ++ +  
Sbjct: 208 QERNQEALNDFNKAIELNNQNVEAYNSRGILFKELNKMDEAFKDYNKATDLNPKYVNSLY 267

Query: 556 HLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGID 615
           +    Y +L   EKAL+    VL  ++  S  Y+ RG L    G+ + AIKD +  + I+
Sbjct: 268 NRGNLYYNLGQKEKALKDYMLVLERNQAHSDTYNSRGNLYMNDGKIELAIKDYNKAIEIN 327

Query: 616 PSNIECLYLRASCYHAIGEYREA 638
           P N   L    S Y+   +Y +A
Sbjct: 328 PLNPLYLTNLGSLYYHQKDYIKA 350



 Score = 59.7 bits (143), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 95/191 (49%), Gaps = 15/191 (7%)

Query: 485 ILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAI 544
           +L E G +    K FN  +E       L+ ++   +      +  +G+ +KA   + +AI
Sbjct: 26  LLDELGKIEDALKSFNKTIE-------LNAKDAKLFKCRADLMEKMGQTEKAFNDYQQAI 78

Query: 545 QLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKA 604
            LD  F+ A+ +    YQ     ++AL  L +++ +D + ++A++ RG + H L + K+A
Sbjct: 79  DLDPQFINAYFNRALLYQKQKKYQEALNDLDKIIELDPKNAQAFNSRGNIYHDLEKDKEA 138

Query: 605 IKDLSSGLGIDPSNIECLYLR--------ASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           + D ++ L +DP+N      R        A+ +   G  +EA+ DY+ ++ L+  S  K+
Sbjct: 139 MIDFNTSLLLDPNNSNTYNNRGQFTVITLANLFSDQGLDQEALNDYNKSILLDPQSSNKY 198

Query: 657 VLQCLAFYQKE 667
             + + F ++E
Sbjct: 199 CNRGVLFRKQE 209



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 67/127 (52%)

Query: 523 LGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDK 582
           LG+ L  +G+ + A ++  K I+L+    + +       + +  +EKA    QQ + +D 
Sbjct: 23  LGILLDELGKIEDALKSFNKTIELNAKDAKLFKCRADLMEKMGQTEKAFNDYQQAIDLDP 82

Query: 583 RFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDY 642
           +F  AY  R LL     ++++A+ DL   + +DP N +    R + YH + + +EA+ D+
Sbjct: 83  QFINAYFNRALLYQKQKKYQEALNDLDKIIELDPKNAQAFNSRGNIYHDLEKDKEAMIDF 142

Query: 643 DAALDLE 649
           + +L L+
Sbjct: 143 NTSLLLD 149



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/272 (20%), Positives = 108/272 (39%), Gaps = 53/272 (19%)

Query: 430 ELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHER 489
           ++E A+  F + I+ N    + +K R      +G++ +A  D  +A++ +P   +    R
Sbjct: 32  KIEDALKSFNKTIELNAKDAKLFKCRADLMEKMGQTEKAFNDYQQAIDLDPQFINAYFNR 91

Query: 490 GIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRN 549
            ++  K K +  A+ DL   ++LD +N  A+   G                         
Sbjct: 92  ALLYQKQKKYQEALNDLDKIIELDPKNAQAFNSRG------------------------- 126

Query: 550 FLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGL--------LLHGLGQH 601
                      Y DL   ++A+      L +D   S  Y+ RG         L    G  
Sbjct: 127 ---------NIYHDLEKDKEAMIDFNTSLLLDPNNSNTYNNRGQFTVITLANLFSDQGLD 177

Query: 602 KKAIKDLSSGLGIDP--SNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQ 659
           ++A+ D +  + +DP  SN  C   R   +      +EA+ D++ A++L   ++E     
Sbjct: 178 QEALNDYNKSILLDPQSSNKYC--NRGVLFRKQERNQEALNDFNKAIELNNQNVE----- 230

Query: 660 CLAFYQKEIALYTASKINSEFCWFDIDGDIDP 691
             A+  + I     +K++  F  ++   D++P
Sbjct: 231 --AYNSRGILFKELNKMDEAFKDYNKATDLNP 260


>gi|386812651|ref|ZP_10099876.1| peptidase [planctomycete KSU-1]
 gi|386404921|dbj|GAB62757.1| peptidase [planctomycete KSU-1]
          Length = 619

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 115/263 (43%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR 454
           G Y  AI I+ QI++  P         G           AI  F +AI S P   EA+  
Sbjct: 317 GCYGEAIGIYKQIIRIQPKNARIHYKLGEDYRILEHYPEAIHAFKKAIDSKPDFVEAYSS 376

Query: 455 RGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDK 514
            G     LG   EAI+   + +   P+        G    K   +  A++     +    
Sbjct: 377 LGLVCFNLGYYSEAIEAYQQVITINPHDTKAHIMLGSAYSKQGCYTEAIDVFKKVIYSKP 436

Query: 515 ENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECL 574
           ++  AY  LG+A   +G Y +A +A+ +AI +  +    + +L   Y+ L  S +A++  
Sbjct: 437 DDTHAYFLLGVAYEKLGSYTEAIDAYKQAISIKPDDAGMYYNLGMTYEKLERSGEAIDAY 496

Query: 575 QQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGE 634
           +Q +Y+    ++AY + G++   L +H +AI      + I P + +  Y  A  Y+ +  
Sbjct: 497 KQAIYLKPDDTRAYRMLGMVYAKLKRHVEAIDVYKLAINIRPDDADIYYRLALMYNILNR 556

Query: 635 YREAIKDYDAALDLELDSMEKFV 657
           Y E I+ Y  A+ ++ D  E ++
Sbjct: 557 YGEEIEAYKQAILIKPDFAEAYL 579



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 92/203 (45%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           S G+   N G Y+ AI  + Q++  +P   +A I  G+A + Q     AI  F + I S 
Sbjct: 376 SLGLVCFNLGYYSEAIEAYQQVITINPHDTKAHIMLGSAYSKQGCYTEAIDVFKKVIYSK 435

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P    A+   G A   LG   EAI    +A+  +P+ A + +  G+   K +    A++ 
Sbjct: 436 PDDTHAYFLLGVAYEKLGSYTEAIDAYKQAISIKPDDAGMYYNLGMTYEKLERSGEAIDA 495

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLA 565
               + L  ++  AY  LG+  + +  + +A + +  AI +  +  + +  L   Y  L 
Sbjct: 496 YKQAIYLKPDDTRAYRMLGMVYAKLKRHVEAIDVYKLAINIRPDDADIYYRLALMYNILN 555

Query: 566 NSEKALECLQQVLYIDKRFSKAY 588
              + +E  +Q + I   F++AY
Sbjct: 556 RYGEEIEAYKQAILIKPDFAEAY 578



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 74/331 (22%), Positives = 136/331 (41%), Gaps = 17/331 (5%)

Query: 348 LSFKWDMLKETSNEAKRNKKFCVTRISKSKSISV---------------DFRLSRGIAQV 392
           L+F   M  +  N A  NK+  VT++ + +S S+               +   ++G+  +
Sbjct: 189 LAFSQSMKDQNQNIAIHNKR--VTKLLEDRSDSLTKWVEGETNEWFSSAEGLCNKGVFYL 246

Query: 393 NEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAW 452
               Y +A+  F++  KE+P Y  A    G           AI  +  AI+ N +  E  
Sbjct: 247 AAEDYENALRCFEKAGKENPRYSLAYFYIGYCMDKLGRYSEAIEAYKRAIRINATFLEVH 306

Query: 453 KRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKL 512
              G+    LG   EAI    + +  +P +A I ++ G      + +  A+      +  
Sbjct: 307 YNLGEDYDRLGCYGEAIGIYKQIIRIQPKNARIHYKLGEDYRILEHYPEAIHAFKKAIDS 366

Query: 513 DKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALE 572
             +   AY+ LGL   ++G Y +A EA+ + I ++ +  +A   L   Y       +A++
Sbjct: 367 KPDFVEAYSSLGLVCFNLGYYSEAIEAYQQVITINPHDTKAHIMLGSAYSKQGCYTEAID 426

Query: 573 CLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAI 632
             ++V+Y     + AY L G+    LG + +AI      + I P +    Y     Y  +
Sbjct: 427 VFKKVIYSKPDDTHAYFLLGVAYEKLGSYTEAIDAYKQAISIKPDDAGMYYNLGMTYEKL 486

Query: 633 GEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
               EAI  Y  A+ L+ D    + +  + +
Sbjct: 487 ERSGEAIDAYKQAIYLKPDDTRAYRMLGMVY 517



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 77/190 (40%)

Query: 388 GIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPS 447
           G A   +G Y  AI +F +++   P    A    G A         AI  + +AI   P 
Sbjct: 412 GSAYSKQGCYTEAIDVFKKVIYSKPDDTHAYFLLGVAYEKLGSYTEAIDAYKQAISIKPD 471

Query: 448 AGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLS 507
               +   G     L  S EAI    +A+  +P+        G+V  K K    A++   
Sbjct: 472 DAGMYYNLGMTYEKLERSGEAIDAYKQAIYLKPDDTRAYRMLGMVYAKLKRHVEAIDVYK 531

Query: 508 ACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANS 567
             + +  ++   Y  L L  + +  Y +  EA+ +AI +  +F EA+  L + Y +  + 
Sbjct: 532 LAINIRPDDADIYYRLALMYNILNRYGEEIEAYKQAILIKPDFAEAYLGLGKRYVNQGDR 591

Query: 568 EKALECLQQV 577
             ALE  + +
Sbjct: 592 NSALEVYKTL 601


>gi|298252040|ref|ZP_06975843.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297546632|gb|EFH80500.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 1170

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 121/267 (45%), Gaps = 1/267 (0%)

Query: 392 VNE-GKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNPSAGE 450
           +NE GKY  A++ ++++++ DP        +G+        E A++ F E I+ +P + E
Sbjct: 345 LNELGKYEEALATYEEVIRLDPNGARIYSNKGSVLFQLGRYEEAVAAFEEHIRLDPESPE 404

Query: 451 AWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACV 510
           A+  +G+   AL    EA+    +AL  +P  A   + +G +    K +  A+      +
Sbjct: 405 AYFNKGKTLIALDRPEEALAMFEQALWLDPYDARKYYHKGNMLMALKRYEEALVVFEQSI 464

Query: 511 KLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKA 570
           +LD E   AY   G  LS +G Y +A   + + +  D N  E +         L   E+A
Sbjct: 465 QLDPEPVDAYAQRGDILSELGRYAEALAMYEQVLARDPNRAEMYVKQGSLLYMLDRFEEA 524

Query: 571 LECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYH 630
            + L+Q L +D   ++ Y  +   L  LG+ ++A+  L   + +DP N +  + +     
Sbjct: 525 ADALEQALCLDPGLTQVYLAQAGPLQRLGRLEEAVAALEQAIHLDPKNADAYFSQGGMLI 584

Query: 631 AIGEYREAIKDYDAALDLELDSMEKFV 657
            +  Y EA+   +  + L  D    +V
Sbjct: 585 TLKRYGEALNAIEQYMRLRPDDAFAYV 611



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 29/262 (11%)

Query: 380  SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
            ++  RL +G      G+Y  A++  +Q L+ DP    AL+                    
Sbjct: 910  TIALRLDQGQFLYTLGRYEEALAAVEQALRLDPEDIRALL------------------LE 951

Query: 440  EAIQSNPSAG-EAWKRRGQARAALGESV-----EAIQDLSKALEFEPNSADILHERGIVN 493
            E IQS  S+G +  +RRG   A+  E V     EA++   +A+  +P+  + L  RG   
Sbjct: 952  EGIQSARSSGTQPERRRGIPLASQIEMVPDKVLEALKRQEEAMHPDPDRIEKLVARGKDL 1011

Query: 494  FKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNF--L 551
            FK K +N A+E +   + LD  +  AY      L  +   K A E   +AI+L+  +   
Sbjct: 1012 FKRKQYNEALEVIEQAIGLDPNHAEAYEVKSRVLVGLSLKKAALEVLEQAIRLNPYYSDY 1071

Query: 552  EAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSG 611
             ++G L     +L    +AL+  +Q ++ D  F+ AY ++G +L  L +++KA+ +    
Sbjct: 1072 SSYGLLLH---ELGRHREALKAFEQHIHFDPGFAPAYFMKGKILLFLKRYEKALIEFERA 1128

Query: 612  LGIDPSNIECLYLRASCYHAIG 633
            + +DP+  +    +     A+G
Sbjct: 1129 IHLDPNIADFYQGKGKALQALG 1150



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 120/266 (45%), Gaps = 2/266 (0%)

Query: 395 GKYASAISIFDQILKEDPMYPEALIGRG-TARAFQRELEAAISDFTEAIQSNPSAGEAWK 453
           G+Y  A++ F++ ++ DP  PEA   +G T  A  R  E A++ F +A+  +P     + 
Sbjct: 383 GRYEEAVAAFEEHIRLDPESPEAYFNKGKTLIALDRP-EEALAMFEQALWLDPYDARKYY 441

Query: 454 RRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLD 513
            +G    AL    EA+    ++++ +P   D   +RG +  +   +  A+      +  D
Sbjct: 442 HKGNMLMALKRYEEALVVFEQSIQLDPEPVDAYAQRGDILSELGRYAEALAMYEQVLARD 501

Query: 514 KENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALEC 573
                 Y   G  L  +  +++A +A  +A+ LD    + +       Q L   E+A+  
Sbjct: 502 PNRAEMYVKQGSLLYMLDRFEEAADALEQALCLDPGLTQVYLAQAGPLQRLGRLEEAVAA 561

Query: 574 LQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIG 633
           L+Q +++D + + AY  +G +L  L ++ +A+  +   + + P +      R     ++ 
Sbjct: 562 LEQAIHLDPKNADAYFSQGGMLITLKRYGEALNAIEQYMRLRPDDAFAYVARGEVLVSLN 621

Query: 634 EYREAIKDYDAALDLELDSMEKFVLQ 659
              EA++  + A+ L  +    + L+
Sbjct: 622 RPEEALEAVEQAIRLNPNDSRAYALK 647



 Score = 63.9 bits (154), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 120/269 (44%), Gaps = 2/269 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
            VD    RG      G+YA A+++++Q+L  DP   E  + +G+        E A     
Sbjct: 470 PVDAYAQRGDILSELGRYAEALAMYEQVLARDPNRAEMYVKQGSLLYMLDRFEEAADALE 529

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +A+  +P   + +  +      LG   EA+  L +A+  +P +AD    +G +    K +
Sbjct: 530 QALCLDPGLTQVYLAQAGPLQRLGRLEEAVAALEQAIHLDPKNADAYFSQGGMLITLKRY 589

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             A+  +   ++L  ++  AY   G  L S+   ++A EA  +AI+L+ N   A+    +
Sbjct: 590 GEALNAIEQYMRLRPDDAFAYVARGEVLVSLNRPEEALEAVEQAIRLNPNDSRAYALKKK 649

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
               L+  ++A   L+Q     +    A+  +G  L    + ++ +  L   + +DP+N 
Sbjct: 650 IELVLSPGKEAPAELEQKTVPAQ--VGAFVAQGEALEEGKRCEEILAVLDEAIRLDPTNA 707

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDL 648
                R +    +  Y+EA+ ++  A+ L
Sbjct: 708 YHHNDRGTALFFLKRYKEALTEFQLAILL 736



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 87/199 (43%)

Query: 462 LGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYT 521
           LG+  EA+    + +  +PN A I   +G V F+   +  AV      ++LD E+  AY 
Sbjct: 348 LGKYEEALATYEEVIRLDPNGARIYSNKGSVLFQLGRYEEAVAAFEEHIRLDPESPEAYF 407

Query: 522 YLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYID 581
             G  L ++   ++A     +A+ LD      + H       L   E+AL   +Q + +D
Sbjct: 408 NKGKTLIALDRPEEALAMFEQALWLDPYDARKYYHKGNMLMALKRYEEALVVFEQSIQLD 467

Query: 582 KRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKD 641
                AY  RG +L  LG++ +A+      L  DP+  E    + S  + +  + EA   
Sbjct: 468 PEPVDAYAQRGDILSELGRYAEALAMYEQVLARDPNRAEMYVKQGSLLYMLDRFEEAADA 527

Query: 642 YDAALDLELDSMEKFVLQC 660
            + AL L+    + ++ Q 
Sbjct: 528 LEQALCLDPGLTQVYLAQA 546



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 14/223 (6%)

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
           N A+ L+E G    K+++  A  E+    ++LD      Y+  G  L  +G Y++A  A 
Sbjct: 340 NRANSLNELG----KYEEALATYEE---VIRLDPNGARIYSNKGSVLFQLGRYEEAVAAF 392

Query: 541 LKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQ 600
            + I+LD    EA+ +  +    L   E+AL   +Q L++D   ++ Y+ +G +L  L +
Sbjct: 393 EEHIRLDPESPEAYFNKGKTLIALDRPEEALAMFEQALWLDPYDARKYYHKGNMLMALKR 452

Query: 601 HKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQC 660
           +++A+      + +DP  ++    R      +G Y EA+  Y+  L  + +  E +V Q 
Sbjct: 453 YEEALVVFEQSIQLDPEPVDAYAQRGDILSELGRYAEALAMYEQVLARDPNRAEMYVKQG 512

Query: 661 LAFYQKEIALYTASKINSEFCWFDIDGDIDPLFKEYWCKRLHP 703
              Y  +     A  +    C       +DP   + +  +  P
Sbjct: 513 SLLYMLDRFEEAADALEQALC-------LDPGLTQVYLAQAGP 548



 Score = 54.3 bits (129), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 135/647 (20%), Positives = 251/647 (38%), Gaps = 120/647 (18%)

Query: 48  SLRNWSKAIRILDSLLAQSYEIQDICNRAFCYSQLELHKHVIRDCDKALQLDPTLLQAYI 107
           +L  + + IR LD   A+ Y      N+     QL  ++  +   ++ ++LDP   +AY 
Sbjct: 354 ALATYEEVIR-LDPNGARIY-----SNKGSVLFQLGRYEEAVAAFEEHIRLDPESPEAYF 407

Query: 108 LKGCAFSALGRKEEALSVWEKG----------YEHALHQSADLKQFLELEELLTAAKQDR 157
            KG    AL R EEAL+++E+           Y H  +    LK++   EE L   +Q  
Sbjct: 408 NKGKTLIALDRPEEALAMFEQALWLDPYDARKYYHKGNMLMALKRY---EEALVVFEQSI 464

Query: 158 SVTCEYDVSNSMSSLTVSESGLNAND-KMSE--TSENHNKSDI----------CDSSSQS 204
            +  E   + +     +SE G  A    M E   + + N++++           D   ++
Sbjct: 465 QLDPEPVDAYAQRGDILSELGRYAEALAMYEQVLARDPNRAEMYVKQGSLLYMLDRFEEA 524

Query: 205 RDVSETCSKSSHDPDLCNGRSDEAKGGSSVPVSKSG-LHINGKLREVSENHNGSSDGSKS 263
            D  E          LC        G + V ++++G L   G+L E             +
Sbjct: 525 ADALEQA--------LCLD-----PGLTQVYLAQAGPLQRLGRLEE-------------A 558

Query: 264 THASRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSA------- 316
             A   A  ++ +++D +    G +      +R+G   N     + +L  D A       
Sbjct: 559 VAALEQAIHLDPKNADAYFSQGGML---ITLKRYGEALNAIEQ-YMRLRPDDAFAYVARG 614

Query: 317 ----SLNDSNTNSESYSKSSISDNKSSDSTESRSKLSFKWDMLKETSNEAKRNKKFCVTR 372
               SLN      E+  ++   +   S +   + K+       KE   E ++        
Sbjct: 615 EVLVSLNRPEEALEAVEQAIRLNPNDSRAYALKKKIELVLSPGKEAPAELEQ-------- 666

Query: 373 ISKSKSISVDFRLSRGIAQVNEGKYASAI-SIFDQILKEDPMYPEALIGRGTARAFQREL 431
             K+    V   +++G A + EGK    I ++ D+ ++ DP        RGTA  F +  
Sbjct: 667 --KTVPAQVGAFVAQGEA-LEEGKRCEEILAVLDEAIRLDPTNAYHHNDRGTALFFLKRY 723

Query: 432 EAAISDFTEAI----------------------------------QSNPSAGEAWKRRGQ 457
           + A+++F  AI                                  + +P+  EA+  +G 
Sbjct: 724 KEALTEFQLAILLHPRYAIAHQNKGRILFELKCYEEALAEFEEALRLDPTIAEAYLNKGL 783

Query: 458 ARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENK 517
               L    EA+      ++ +P  A I H  G V    +    A++     ++L   + 
Sbjct: 784 LLLELERYEEALATFQDGVQLDPPDARIYHNLGAVLRMLERDEEALDVYEQMLQLGLGSA 843

Query: 518 SAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQV 577
             Y   G AL ++  Y++A  A  +A++LD + + +     Q    L + E+AL   +Q 
Sbjct: 844 DLYLSQGGALYALERYEEALVAVEQALRLDPDNIASHLAQGQILYSLEHYEEALVVAEQT 903

Query: 578 LYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
           L+++         +G  L+ LG++++A+  +   L +DP +I  L L
Sbjct: 904 LHLNPDTIALRLDQGQFLYTLGRYEEALAAVEQALRLDPEDIRALLL 950



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 105/237 (44%)

Query: 417 ALIGRGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKAL 476
           A + +G A    +  E  ++   EAI+ +P+       RG A   L    EA+ +   A+
Sbjct: 675 AFVAQGEALEEGKRCEEILAVLDEAIRLDPTNAYHHNDRGTALFFLKRYKEALTEFQLAI 734

Query: 477 EFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKA 536
              P  A     +G + F+ K +  A+ +    ++LD     AY   GL L  +  Y++A
Sbjct: 735 LLHPRYAIAHQNKGRILFELKCYEEALAEFEEALRLDPTIAEAYLNKGLLLLELERYEEA 794

Query: 537 EEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLH 596
                  +QLD      + +L    + L   E+AL+  +Q+L +    +  Y  +G  L+
Sbjct: 795 LATFQDGVQLDPPDARIYHNLGAVLRMLERDEEALDVYEQMLQLGLGSADLYLSQGGALY 854

Query: 597 GLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELDSM 653
            L ++++A+  +   L +DP NI     +    +++  Y EA+   +  L L  D++
Sbjct: 855 ALERYEEALVAVEQALRLDPDNIASHLAQGQILYSLEHYEEALVVAEQTLHLNPDTI 911



 Score = 42.0 bits (97), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 86/387 (22%), Positives = 139/387 (35%), Gaps = 55/387 (14%)

Query: 95   ALQLDPTLLQAYILKGCAFSALGRKEEALSVWEKGYEHAL-------HQSADLKQFLELE 147
             +QLDP   + Y   G     L R EEAL V+E+  +  L        Q   L      E
Sbjct: 801  GVQLDPPDARIYHNLGAVLRMLERDEEALDVYEQMLQLGLGSADLYLSQGGALYALERYE 860

Query: 148  ELLTAAKQDRSVTCEYDVSNSMSSLTVSESGLNANDKMSETSENHNKSDICDSSSQSRDV 207
            E L A +Q        D  N  S L        A  ++  + E++ ++ +    +   + 
Sbjct: 861  EALVAVEQ----ALRLDPDNIASHL--------AQGQILYSLEHYEEALVVAEQTLHLNP 908

Query: 208  SETCSKSSHDPDLCN-GRSDEAKGGSSVPVSKSGLHINGKLREVSENHNGSSDGSKSTHA 266
                 +      L   GR +EA       +      I   L E         +G +S  +
Sbjct: 909  DTIALRLDQGQFLYTLGRYEEALAAVEQALRLDPEDIRALLLE---------EGIQSARS 959

Query: 267  SRDASEINRQSSDDFDICNGPIDKASVNERHGRQTNGTHDVHDKLSSDSASLND------ 320
            S    E  R       I   P DK  V E   RQ    H   D++    A   D      
Sbjct: 960  SGTQPERRRGIPLASQIEMVP-DK--VLEALKRQEEAMHPDPDRIEKLVARGKDLFKRKQ 1016

Query: 321  SNTNSESYSKSSISDNKSSDSTESRSK----LSFKWDMLKETSNEAKRNKKFCVTRISKS 376
             N   E   ++   D   +++ E +S+    LS K   L+      + N  +        
Sbjct: 1017 YNEALEVIEQAIGLDPNHAEAYEVKSRVLVGLSLKKAALEVLEQAIRLNPYYS------- 1069

Query: 377  KSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAIS 436
                 D+  S G+     G++  A+  F+Q +  DP +  A   +G    F +  E A+ 
Sbjct: 1070 -----DYS-SYGLLLHELGRHREALKAFEQHIHFDPGFAPAYFMKGKILLFLKRYEKALI 1123

Query: 437  DFTEAIQSNPSAGEAWKRRGQARAALG 463
            +F  AI  +P+  + ++ +G+A  ALG
Sbjct: 1124 EFERAIHLDPNIADFYQGKGKALQALG 1150



 Score = 39.7 bits (91), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 66/320 (20%), Positives = 128/320 (40%), Gaps = 32/320 (10%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           + D   S+G   +   +Y  A++  +Q ++  P    A + RG         E A+    
Sbjct: 572 NADAYFSQGGMLITLKRYGEALNAIEQYMRLRPDDAFAYVARGEVLVSLNRPEEALEAVE 631

Query: 440 EAIQSNPSAGEAWKRRGQ-------------------------ARAALGESVE------- 467
           +AI+ NP+   A+  + +                         A  A GE++E       
Sbjct: 632 QAIRLNPNDSRAYALKKKIELVLSPGKEAPAELEQKTVPAQVGAFVAQGEALEEGKRCEE 691

Query: 468 AIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLAL 527
            +  L +A+  +P +A   ++RG   F  K +  A+ +    + L      A+   G  L
Sbjct: 692 ILAVLDEAIRLDPTNAYHHNDRGTALFFLKRYKEALTEFQLAILLHPRYAIAHQNKGRIL 751

Query: 528 SSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKA 587
             +  Y++A     +A++LD    EA+ +      +L   E+AL   Q  + +D   ++ 
Sbjct: 752 FELKCYEEALAEFEEALRLDPTIAEAYLNKGLLLLELERYEEALATFQDGVQLDPPDARI 811

Query: 588 YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
           YH  G +L  L + ++A+      L +   + +    +    +A+  Y EA+   + AL 
Sbjct: 812 YHNLGAVLRMLERDEEALDVYEQMLQLGLGSADLYLSQGGALYALERYEEALVAVEQALR 871

Query: 648 LELDSMEKFVLQCLAFYQKE 667
           L+ D++   + Q    Y  E
Sbjct: 872 LDPDNIASHLAQGQILYSLE 891


>gi|384217582|ref|YP_005608748.1| hypothetical protein BJ6T_38860 [Bradyrhizobium japonicum USDA 6]
 gi|354956481|dbj|BAL09160.1| hypothetical protein BJ6T_38860 [Bradyrhizobium japonicum USDA 6]
          Length = 287

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 77/141 (54%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           +RG+A +   +Y  AI  FD  +K DP Y  A + R  A   + + + A  D+ EAI+  
Sbjct: 111 NRGVAHLRRREYELAIEAFDNAIKLDPGYGAAFVNRAGAYLKKNDHQRAAHDYDEAIRLQ 170

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P++  AW  R   RA LG S EA++D  +AL+    SA +   RG+++ K  +F AA++D
Sbjct: 171 PASRAAWSGRCWTRAVLGASREALEDCDRALQSGSTSAAVYDSRGLIHLKMGEFGAAIDD 230

Query: 506 LSACVKLDKENKSAYTYLGLA 526
            ++ ++   E  SA    GLA
Sbjct: 231 YNSALRAAPELASALFGRGLA 251



 Score = 64.3 bits (155), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 4/200 (2%)

Query: 431 LEAAISDFTEAIQSNPSAGEA----WKRRGQARAALGESVEAIQDLSKALEFEPNSADIL 486
           L+A I   T  IQ+ P +  A    +  RG A  A G+   AI D  +++   P  A   
Sbjct: 50  LDARIGACTTFIQARPDSTAALAIAYNNRGNAYTAKGDYDSAISDFDQSIALNPTYAKAF 109

Query: 487 HERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQL 546
           + RG+ + + +++  A+E     +KLD    +A+     A     ++++A   + +AI+L
Sbjct: 110 NNRGVAHLRRREYELAIEAFDNAIKLDPGYGAAFVNRAGAYLKKNDHQRAAHDYDEAIRL 169

Query: 547 DRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIK 606
                 AW         L  S +ALE   + L      +  Y  RGL+   +G+   AI 
Sbjct: 170 QPASRAAWSGRCWTRAVLGASREALEDCDRALQSGSTSAAVYDSRGLIHLKMGEFGAAID 229

Query: 607 DLSSGLGIDPSNIECLYLRA 626
           D +S L   P     L+ R 
Sbjct: 230 DYNSALRAAPELASALFGRG 249


>gi|241116838|ref|XP_002401632.1| tetratricopeptide repeat protein, tpr, putative [Ixodes scapularis]
 gi|215493176|gb|EEC02817.1| tetratricopeptide repeat protein, tpr, putative [Ixodes scapularis]
          Length = 411

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 149/297 (50%), Gaps = 8/297 (2%)

Query: 386 SRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSN 445
           ++GI+ +  GKY  AI  +++++       E+   +G + A   + + A+ ++  AI+  
Sbjct: 112 NKGISLIKLGKYQDAIENYNRVITYQSNDAESYNNKGYSLAQLAKYQEAVENYNLAIKYK 171

Query: 446 PSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVED 505
           P+   A+  +G +  AL +  EAI++   A++++ + A++ + +G+   K   +  A+++
Sbjct: 172 PNFITAYYNKGISLIALRKYQEAIRNFDLAIKYKFDDAELYYNKGVAFEKLGHYQEAIKN 231

Query: 506 LSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF-YQDL 564
            +  +K   +   AY   G+A + +G Y+ A E +   I+   +  E + +      + L
Sbjct: 232 FNLTIKYQPDYAKAYFGKGVAYAELGNYQDAIENYDLFIKYKSDDAEGYNNNKGIALEGL 291

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
             S +A++     +     F   YH +G+  + LG++ +A+++ +  +   P   E  YL
Sbjct: 292 GRSHEAIKNYDLAIKYKPDFVLPYHNKGIAFNKLGKYHEAVENFNFAIKHQPYAAEA-YL 350

Query: 625 RASCYHAI-GEYREAIKDYDAALDLELDSMEKF-----VLQCLAFYQKEIALYTASK 675
           +  C  A+  +Y+EAI+++D A+  + D  E +     VLQ L   Q+ I L+  +K
Sbjct: 351 KKGCSLALLTKYQEAIENFDLAIQYKPDLAESYTEKGKVLQKLGKRQEAIELFNKAK 407



 Score = 79.7 bits (195), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/294 (20%), Positives = 138/294 (46%), Gaps = 6/294 (2%)

Query: 381 VDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTE 440
           ++  L +G +     KY  A+  ++  +K  P +  A   +G +     + + AI ++  
Sbjct: 73  IEAYLEKGYSLAQLAKYQEAVENYNLAIKYKPDFIPAYYNKGISLIKLGKYQDAIENYNR 132

Query: 441 AIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFN 500
            I    +  E++  +G + A L +  EA+++ + A++++PN     + +GI     + + 
Sbjct: 133 VITYQSNDAESYNNKGYSLAQLAKYQEAVENYNLAIKYKPNFITAYYNKGISLIALRKYQ 192

Query: 501 AAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQF 560
            A+ +    +K   ++   Y   G+A   +G Y++A +     I+   ++ +A+      
Sbjct: 193 EAIRNFDLAIKYKFDDAELYYNKGVAFEKLGHYQEAIKNFNLTIKYQPDYAKAYFGKGVA 252

Query: 561 YQDLANSEKALECLQQVLYIDKRFSKAY-HLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
           Y +L N + A+E     +      ++ Y + +G+ L GLG+  +AIK+    +   P  +
Sbjct: 253 YAELGNYQDAIENYDLFIKYKSDDAEGYNNNKGIALEGLGRSHEAIKNYDLAIKYKPDFV 312

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFV-----LQCLAFYQKEI 668
              + +   ++ +G+Y EA+++++ A+  +  + E ++     L  L  YQ+ I
Sbjct: 313 LPYHNKGIAFNKLGKYHEAVENFNFAIKHQPYAAEAYLKKGCSLALLTKYQEAI 366



 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 38/272 (13%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQSNP 446
           +GI      K+  AI  +D  +K  P Y EA + +G + A   + + A+ ++  AI+  P
Sbjct: 45  KGIECARLAKHQDAIKNYDLAIKYQPNYIEAYLEKGYSLAQLAKYQEAVENYNLAIKYKP 104

Query: 447 SAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVEDL 506
               A+  +G +   LG+  +AI++ ++ + ++ N A+  + +G    +   +  AVE+ 
Sbjct: 105 DFIPAYYNKGISLIKLGKYQDAIENYNRVITYQSNDAESYNNKGYSLAQLAKYQEAVENY 164

Query: 507 SACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDLAN 566
           +  +K      +AY   G++L ++ +Y++A           RNF            DLA 
Sbjct: 165 NLAIKYKPNFITAYYNKGISLIALRKYQEA----------IRNF------------DLA- 201

Query: 567 SEKALECLQQVLYIDKRFSKA--YHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
                        I  +F  A  Y+ +G+    LG +++AIK+ +  +   P   +  + 
Sbjct: 202 -------------IKYKFDDAELYYNKGVAFEKLGHYQEAIKNFNLTIKYQPDYAKAYFG 248

Query: 625 RASCYHAIGEYREAIKDYDAALDLELDSMEKF 656
           +   Y  +G Y++AI++YD  +  + D  E +
Sbjct: 249 KGVAYAELGNYQDAIENYDLFIKYKSDDAEGY 280



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/224 (22%), Positives = 109/224 (48%)

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           E I +N     A+  +G   A L +  +AI++   A++++PN  +   E+G    +   +
Sbjct: 30  EVILNNTEKYSAYYDKGIECARLAKHQDAIKNYDLAIKYQPNYIEAYLEKGYSLAQLAKY 89

Query: 500 NAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQ 559
             AVE+ +  +K   +   AY   G++L  +G+Y+ A E + + I    N  E++ +   
Sbjct: 90  QEAVENYNLAIKYKPDFIPAYYNKGISLIKLGKYQDAIENYNRVITYQSNDAESYNNKGY 149

Query: 560 FYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNI 619
               LA  ++A+E     +     F  AY+ +G+ L  L ++++AI++    +     + 
Sbjct: 150 SLAQLAKYQEAVENYNLAIKYKPNFITAYYNKGISLIALRKYQEAIRNFDLAIKYKFDDA 209

Query: 620 ECLYLRASCYHAIGEYREAIKDYDAALDLELDSMEKFVLQCLAF 663
           E  Y +   +  +G Y+EAIK+++  +  + D  + +  + +A+
Sbjct: 210 ELYYNKGVAFEKLGHYQEAIKNFNLTIKYQPDYAKAYFGKGVAY 253



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 100/217 (46%), Gaps = 5/217 (2%)

Query: 361 EAKRNKKFCVTRISKSKSISVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIG 420
           EA RN    +    K K    +   ++G+A    G Y  AI  F+  +K  P Y +A  G
Sbjct: 193 EAIRNFDLAI----KYKFDDAELYYNKGVAFEKLGHYQEAIKNFNLTIKYQPDYAKAYFG 248

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKR-RGQARAALGESVEAIQDLSKALEFE 479
           +G A A     + AI ++   I+      E +   +G A   LG S EAI++   A++++
Sbjct: 249 KGVAYAELGNYQDAIENYDLFIKYKSDDAEGYNNNKGIALEGLGRSHEAIKNYDLAIKYK 308

Query: 480 PNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEA 539
           P+     H +GI   K   ++ AVE+ +  +K       AY   G +L+ + +Y++A E 
Sbjct: 309 PDFVLPYHNKGIAFNKLGKYHEAVENFNFAIKHQPYAAEAYLKKGCSLALLTKYQEAIEN 368

Query: 540 HLKAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQ 576
              AIQ   +  E++    +  Q L   ++A+E   +
Sbjct: 369 FDLAIQYKPDLAESYTEKGKVLQKLGKRQEAIELFNK 405


>gi|86610116|ref|YP_478878.1| hypothetical protein CYB_2690 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558658|gb|ABD03615.1| tetratricopeptide repeat protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 353

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 109/233 (46%), Gaps = 6/233 (2%)

Query: 421 RGTARAFQRELEAAISDFTEAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEP 480
           RG  R   R+L  AI   + A+Q +P    A+  RG+A  ALG+  +A++D  +A+   P
Sbjct: 56  RGRERWLNRDLLGAIEQLSLALQRDPCLANAYILRGEAYFALGQVPQALEDFGQAIRLAP 115

Query: 481 NSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAH 540
              +    RG++     D   A  + +  V+L   N   +  L   L   G    A  AH
Sbjct: 116 RRPEPYFYRGLIRQSQGDLQGATAEFAELVRL-HPNVPHHLSLANLLMQQGSLPLA-LAH 173

Query: 541 L-KAIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLG 599
           L +AI+LD     A     + +  L   E AL    Q   ID   S A++ +  + +  G
Sbjct: 174 LDEAIRLDPTSALAHSQRARLHSYLGEWEAALSDWSQA--IDWDPSPAHYYQRGVTYACG 231

Query: 600 QH-KKAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALDLELD 651
            +  +AI DLS  L I+P     LY+R +  +A+GE + A+ DY+ A  LE D
Sbjct: 232 DYFDEAIADLSRSLEIEPQQPNVLYIRGNLLYALGEIKAALDDYERAFRLEAD 284



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 1/136 (0%)

Query: 380 SVDFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT 439
           +V   LS     + +G    A++  D+ ++ DP    A   R    ++  E EAA+SD++
Sbjct: 150 NVPHHLSLANLLMQQGSLPLALAHLDEAIRLDPTSALAHSQRARLHSYLGEWEAALSDWS 209

Query: 440 EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDF 499
           +AI  +PS    ++ RG   A      EAI DLS++LE EP   ++L+ RG + +   + 
Sbjct: 210 QAIDWDPSPAHYYQ-RGVTYACGDYFDEAIADLSRSLEIEPQQPNVLYIRGNLLYALGEI 268

Query: 500 NAAVEDLSACVKLDKE 515
            AA++D     +L+ +
Sbjct: 269 KAALDDYERAFRLEAD 284



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 34/194 (17%)

Query: 387 RGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFT------- 439
           RG A    G+   A+  F Q ++  P  PE    RG  R  Q +L+ A ++F        
Sbjct: 90  RGEAYFALGQVPQALEDFGQAIRLAPRRPEPYFYRGLIRQSQGDLQGATAEFAELVRLHP 149

Query: 440 --------------------------EAIQSNPSAGEAWKRRGQARAALGESVEAIQDLS 473
                                     EAI+ +P++  A  +R +  + LGE   A+ D S
Sbjct: 150 NVPHHLSLANLLMQQGSLPLALAHLDEAIRLDPTSALAHSQRARLHSYLGEWEAALSDWS 209

Query: 474 KALEFEPNSADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEY 533
           +A++++P+ A   ++RG+       F+ A+ DLS  ++++ +  +     G  L ++GE 
Sbjct: 210 QAIDWDPSPAHY-YQRGVTYACGDYFDEAIADLSRSLEIEPQQPNVLYIRGNLLYALGEI 268

Query: 534 KKAEEAHLKAIQLD 547
           K A + + +A +L+
Sbjct: 269 KAALDDYERAFRLE 282



 Score = 40.4 bits (93), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 1/165 (0%)

Query: 483 ADILHERGIVNFKFKDFNAAVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLK 542
           A + + RG   +  +D   A+E LS  ++ D    +AY   G A  ++G+  +A E   +
Sbjct: 50  AILAYNRGRERWLNRDLLGAIEQLSLALQRDPCLANAYILRGEAYFALGQVPQALEDFGQ 109

Query: 543 AIQLDRNFLEAWGHLTQFYQDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHK 602
           AI+L     E + +     Q   + + A     +++ +         L  LL+   G   
Sbjct: 110 AIRLAPRRPEPYFYRGLIRQSQGDLQGATAEFAELVRLHPNVPHHLSLANLLMQQ-GSLP 168

Query: 603 KAIKDLSSGLGIDPSNIECLYLRASCYHAIGEYREAIKDYDAALD 647
            A+  L   + +DP++      RA  +  +GE+  A+ D+  A+D
Sbjct: 169 LALAHLDEAIRLDPTSALAHSQRARLHSYLGEWEAALSDWSQAID 213


>gi|88604042|ref|YP_504220.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
 gi|88189504|gb|ABD42501.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
          Length = 576

 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 123/265 (46%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
           +++G    ++ +Y  AI  +D  ++ DP   E    +G A   Q   + A+S +  A+Q 
Sbjct: 133 MAKGNVLSDQKQYEDAIRAYDAAIQIDPDNEETWFAKGNAHYNQENFKEAVSAYEIALQK 192

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           +    +AW  +G A+  LG   +A++    AL + P  A     +G+     + ++ A++
Sbjct: 193 DSKDSKAWYNKGNAQYNLGNLEDALKSYEMALAYNPKDAIAYTNKGMALADLERYDDAID 252

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
              A + LD  +  A+T LG   + + EY  A  A   A++L++     W ++       
Sbjct: 253 AYEAALSLDATDLKAWTSLGQVYTKLREYDNAVRAFQMALKLNKTDSSVWKNIGDVLMLE 312

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECLYL 624
              ++AL   +Q + +++  S A+  +G  L+ L ++K+A+        + P        
Sbjct: 313 KRYDEALAAYEQAIALNRMDSSAWIGKGTALNNLARYKEALGVFEIACSMSPLFASGWVG 372

Query: 625 RASCYHAIGEYREAIKDYDAALDLE 649
           + +    +G+ +EA   Y+AAL L+
Sbjct: 373 KGNSLSGLGQIQEADGAYEAALQLD 397



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/346 (22%), Positives = 147/346 (42%), Gaps = 27/346 (7%)

Query: 382 DFRLSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEA 441
           D  +S G    ++G Y  AIS F++ +++DP    A   +G +     +++ AI+ +  A
Sbjct: 28  DDLISDGNVLYSQGMYQEAISYFERAIEQDPSNAAAWYNKGVSLYKLGQVDEAIASYEVA 87

Query: 442 IQSNPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNA 501
           I  +P   + W  +G A  +     EA      A++ +P        +G V    K +  
Sbjct: 88  IGLDPRNSDYWYNKGNALLSKNLLNEAYAAYDVAIQLDPYDVQAWMAKGNVLSDQKQYED 147

Query: 502 AVEDLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFY 561
           A+    A +++D +N+  +   G A  +   +K+A  A+  A+Q D    +AW +     
Sbjct: 148 AIRAYDAAIQIDPDNEETWFAKGNAHYNQENFKEAVSAYEIALQKDSKDSKAWYNKGNAQ 207

Query: 562 QDLANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIEC 621
            +L N E AL+  +  L  + + + AY  +G+ L  L ++  AI    + L +D ++++ 
Sbjct: 208 YNLGNLEDALKSYEMALAYNPKDAIAYTNKGMALADLERYDDAIDAYEAALSLDATDLKA 267

Query: 622 LYLRASCYHAIGEYREAIKDYDAALDL------------ELDSMEKFVLQCLAFYQKEI- 668
                  Y  + EY  A++ +  AL L            ++  +EK   + LA Y++ I 
Sbjct: 268 WTSLGQVYTKLREYDNAVRAFQMALKLNKTDSSVWKNIGDVLMLEKRYDEALAAYEQAIA 327

Query: 669 --------------ALYTASKINSEFCWFDIDGDIDPLFKEYWCKR 700
                         AL   ++       F+I   + PLF   W  +
Sbjct: 328 LNRMDSSAWIGKGTALNNLARYKEALGVFEIACSMSPLFASGWVGK 373



 Score = 73.6 bits (179), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 107/238 (44%)

Query: 385 LSRGIAQVNEGKYASAISIFDQILKEDPMYPEALIGRGTARAFQRELEAAISDFTEAIQS 444
            ++G A  N+  +  A+S ++  L++D    +A   +G A+     LE A+  +  A+  
Sbjct: 167 FAKGNAHYNQENFKEAVSAYEIALQKDSKDSKAWYNKGNAQYNLGNLEDALKSYEMALAY 226

Query: 445 NPSAGEAWKRRGQARAALGESVEAIQDLSKALEFEPNSADILHERGIVNFKFKDFNAAVE 504
           NP    A+  +G A A L    +AI     AL  +          G V  K ++++ AV 
Sbjct: 227 NPKDAIAYTNKGMALADLERYDDAIDAYEAALSLDATDLKAWTSLGQVYTKLREYDNAVR 286

Query: 505 DLSACVKLDKENKSAYTYLGLALSSIGEYKKAEEAHLKAIQLDRNFLEAWGHLTQFYQDL 564
                +KL+K + S +  +G  L     Y +A  A+ +AI L+R    AW        +L
Sbjct: 287 AFQMALKLNKTDSSVWKNIGDVLMLEKRYDEALAAYEQAIALNRMDSSAWIGKGTALNNL 346

Query: 565 ANSEKALECLQQVLYIDKRFSKAYHLRGLLLHGLGQHKKAIKDLSSGLGIDPSNIECL 622
           A  ++AL   +    +   F+  +  +G  L GLGQ ++A     + L +DP N + L
Sbjct: 347 ARYKEALGVFEIACSMSPLFASGWVGKGNSLSGLGQIQEADGAYEAALQLDPRNSQAL 404


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.315    0.129    0.377 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,673,209,243
Number of Sequences: 23463169
Number of extensions: 635443347
Number of successful extensions: 2723494
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14130
Number of HSP's successfully gapped in prelim test: 12798
Number of HSP's that attempted gapping in prelim test: 2354913
Number of HSP's gapped (non-prelim): 209984
length of query: 1050
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 897
effective length of database: 8,769,330,510
effective search space: 7866089467470
effective search space used: 7866089467470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 83 (36.6 bits)