Query 001579
Match_columns 1050
No_of_seqs 819 out of 5234
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 04:19:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001579.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001579hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2040 Glycine dehydrogenase 100.0 5E-247 1E-251 2040.2 67.6 938 84-1036 38-982 (1001)
2 PRK12566 glycine dehydrogenase 100.0 3E-216 7E-221 1940.1 90.5 932 90-1036 5-939 (954)
3 TIGR00461 gcvP glycine dehydro 100.0 4E-211 8E-216 1911.2 94.0 927 101-1036 1-931 (939)
4 PLN02414 glycine dehydrogenase 100.0 3E-202 6E-207 1857.1 96.7 943 92-1036 29-971 (993)
5 PRK05367 glycine dehydrogenase 100.0 6E-198 1E-202 1829.8 93.4 929 92-1036 4-939 (954)
6 COG0403 GcvP Glycine cleavage 100.0 3E-118 7E-123 981.3 42.1 435 93-530 2-447 (450)
7 COG1003 GcvP Glycine cleavage 100.0 4E-118 8E-123 977.1 39.1 457 557-1022 29-496 (496)
8 PF02347 GDC-P: Glycine cleava 100.0 5E-103 1E-107 891.4 37.4 425 100-527 1-429 (429)
9 PF02347 GDC-P: Glycine cleava 100.0 9.5E-67 2.1E-71 594.3 31.7 402 515-965 6-429 (429)
10 PRK04366 glycine dehydrogenase 100.0 1.5E-58 3.3E-63 550.3 41.5 429 546-1001 32-470 (481)
11 PRK00451 glycine dehydrogenase 100.0 2.4E-55 5.3E-60 520.7 42.4 422 100-528 2-443 (447)
12 COG0403 GcvP Glycine cleavage 100.0 4.3E-56 9.4E-61 490.1 33.3 408 517-968 16-447 (450)
13 PRK04366 glycine dehydrogenase 100.0 2.2E-55 4.7E-60 523.3 37.1 380 126-529 30-444 (481)
14 TIGR00461 gcvP glycine dehydro 100.0 5.9E-54 1.3E-58 526.9 38.9 398 105-528 413-862 (939)
15 PRK12566 glycine dehydrogenase 100.0 1E-51 2.2E-56 503.3 35.8 395 515-966 20-439 (954)
16 PRK05367 glycine dehydrogenase 100.0 4.2E-50 9E-55 502.3 37.8 402 512-966 14-437 (954)
17 PLN02414 glycine dehydrogenase 100.0 3.4E-47 7.5E-52 473.3 36.7 403 515-968 42-466 (993)
18 KOG2040 Glycine dehydrogenase 100.0 3E-41 6.4E-46 381.1 26.2 397 516-966 60-478 (1001)
19 COG1003 GcvP Glycine cleavage 100.0 1.7E-38 3.7E-43 349.8 31.0 390 117-529 18-443 (496)
20 PRK00451 glycine dehydrogenase 100.0 2.7E-37 5.7E-42 366.5 41.1 412 515-969 7-446 (447)
21 cd00613 GDC-P Glycine cleavage 100.0 1.3E-35 2.8E-40 346.4 38.1 375 150-527 1-398 (398)
22 cd00613 GDC-P Glycine cleavage 100.0 3.2E-34 6.9E-39 334.8 35.3 375 570-965 1-398 (398)
23 COG0520 csdA Selenocysteine ly 100.0 2.2E-31 4.8E-36 308.6 35.5 360 151-529 6-401 (405)
24 PRK13520 L-tyrosine decarboxyl 100.0 2.8E-26 6E-31 265.2 33.0 359 567-970 1-370 (371)
25 PRK09295 bifunctional cysteine 100.0 8.2E-26 1.8E-30 265.1 33.6 358 151-528 6-399 (406)
26 COG0520 csdA Selenocysteine ly 99.9 9.8E-26 2.1E-30 261.7 33.0 315 627-970 61-404 (405)
27 PRK10874 cysteine sulfinate de 99.9 8.4E-25 1.8E-29 256.0 34.8 360 149-528 5-393 (401)
28 PF00266 Aminotran_5: Aminotra 99.9 9.6E-26 2.1E-30 261.3 26.5 328 179-523 10-371 (371)
29 TIGR03392 FeS_syn_CsdA cystein 99.9 7.1E-25 1.5E-29 256.4 33.8 355 152-528 5-390 (398)
30 PLN03032 serine decarboxylase; 99.9 1E-24 2.2E-29 250.4 33.7 297 628-968 62-373 (374)
31 PLN02855 Bifunctional selenocy 99.9 8E-25 1.7E-29 258.1 33.2 309 207-529 72-414 (424)
32 TIGR01788 Glu-decarb-GAD gluta 99.9 4.7E-24 1E-28 249.8 38.5 380 560-972 16-430 (431)
33 COG1104 NifS Cysteine sulfinat 99.9 8E-25 1.7E-29 245.5 28.7 310 630-975 42-381 (386)
34 PRK02769 histidine decarboxyla 99.9 2.5E-24 5.3E-29 248.9 33.6 301 629-974 62-375 (380)
35 PLN02263 serine decarboxylase 99.9 3.8E-24 8.3E-29 248.9 31.1 297 629-973 130-445 (470)
36 TIGR01979 sufS cysteine desulf 99.9 1.9E-23 4.2E-28 244.6 33.2 305 209-528 60-396 (403)
37 KOG1383 Glutamate decarboxylas 99.9 9.5E-24 2.1E-28 235.9 28.8 374 559-974 54-449 (491)
38 COG1104 NifS Cysteine sulfinat 99.9 1.4E-23 3E-28 235.6 29.7 290 208-529 41-373 (386)
39 TIGR01976 am_tr_V_VC1184 cyste 99.9 2.9E-23 6.3E-28 242.5 33.2 297 206-527 55-397 (397)
40 TIGR01814 kynureninase kynuren 99.9 1.8E-23 3.8E-28 245.4 31.1 293 222-528 80-402 (406)
41 TIGR03812 tyr_de_CO2_Arch tyro 99.9 6E-23 1.3E-27 237.7 34.4 361 569-968 1-373 (373)
42 PLN02651 cysteine desulfurase 99.9 5.3E-23 1.1E-27 237.8 31.4 283 207-521 39-364 (364)
43 cd06453 SufS_like Cysteine des 99.9 1.6E-22 3.4E-27 234.3 33.9 306 206-527 38-373 (373)
44 TIGR03402 FeS_nifS cysteine de 99.9 1.6E-22 3.5E-27 234.9 33.9 292 206-529 37-368 (379)
45 PLN02590 probable tyrosine dec 99.9 2E-22 4.3E-27 240.4 33.7 382 565-973 105-534 (539)
46 COG0076 GadB Glutamate decarbo 99.9 1.1E-22 2.4E-27 238.8 29.0 335 565-939 35-405 (460)
47 PRK13520 L-tyrosine decarboxyl 99.9 4.5E-22 9.8E-27 230.1 32.5 346 147-528 1-366 (371)
48 TIGR01977 am_tr_V_EF2568 cyste 99.9 8.6E-22 1.9E-26 228.3 33.7 301 207-528 40-374 (376)
49 PLN02880 tyrosine decarboxylas 99.9 3.7E-22 8.1E-27 237.8 30.7 386 565-974 57-487 (490)
50 cd06450 DOPA_deC_like DOPA dec 99.9 2.4E-22 5.3E-27 230.0 25.5 294 625-967 31-344 (345)
51 TIGR01979 sufS cysteine desulf 99.9 3.6E-21 7.8E-26 225.5 34.3 313 631-972 61-402 (403)
52 PRK09295 bifunctional cysteine 99.9 3.2E-21 7E-26 226.2 32.9 311 630-970 65-403 (406)
53 COG0156 BioF 7-keto-8-aminopel 99.9 3.4E-22 7.4E-27 228.2 23.5 315 164-528 43-385 (388)
54 TIGR03392 FeS_syn_CsdA cystein 99.9 5.2E-21 1.1E-25 223.9 33.0 312 630-972 58-396 (398)
55 cd06453 SufS_like Cysteine des 99.9 5.9E-21 1.3E-25 221.1 32.4 308 629-965 40-373 (373)
56 PF00282 Pyridoxal_deC: Pyrido 99.9 8.1E-22 1.8E-26 227.6 24.0 316 560-893 11-360 (373)
57 PRK10874 cysteine sulfinate de 99.9 1E-20 2.2E-25 221.6 33.5 312 629-971 60-398 (401)
58 PLN02724 Molybdenum cofactor s 99.9 4.2E-21 9E-26 242.1 31.9 349 156-529 28-484 (805)
59 cd06451 AGAT_like Alanine-glyo 99.9 5.4E-21 1.2E-25 220.1 30.1 312 629-969 29-355 (356)
60 PLN02855 Bifunctional selenocy 99.9 1E-20 2.2E-25 223.3 32.8 314 631-974 75-421 (424)
61 TIGR01976 am_tr_V_VC1184 cyste 99.9 8.6E-21 1.9E-25 221.8 30.9 310 628-965 56-397 (397)
62 TIGR02006 IscS cysteine desulf 99.9 2.9E-20 6.2E-25 218.0 34.5 288 210-529 46-373 (402)
63 TIGR03403 nifS_epsilon cystein 99.9 2.1E-20 4.5E-25 217.6 32.3 288 210-529 41-371 (382)
64 TIGR03402 FeS_nifS cysteine de 99.9 2.6E-20 5.6E-25 216.5 32.6 309 630-974 40-375 (379)
65 PRK02948 cysteine desulfurase; 99.9 2.8E-20 6E-25 216.4 32.3 291 206-529 38-370 (381)
66 TIGR03812 tyr_de_CO2_Arch tyro 99.9 5.1E-20 1.1E-24 213.2 33.2 342 149-528 1-371 (373)
67 PRK02948 cysteine desulfurase; 99.9 4.5E-20 9.9E-25 214.6 32.1 307 630-973 41-376 (381)
68 PF00266 Aminotran_5: Aminotra 99.9 1.5E-20 3.3E-25 217.8 28.0 303 629-961 40-371 (371)
69 TIGR03799 NOD_PanD_pyr putativ 99.9 6.6E-20 1.4E-24 219.1 32.5 379 560-964 61-518 (522)
70 TIGR03403 nifS_epsilon cystein 99.9 1.3E-19 2.8E-24 210.9 34.0 308 634-975 44-379 (382)
71 COG0075 Serine-pyruvate aminot 99.9 5.1E-20 1.1E-24 208.6 28.9 325 170-529 8-359 (383)
72 TIGR01977 am_tr_V_EF2568 cyste 99.9 8.8E-20 1.9E-24 211.5 31.2 305 630-967 42-375 (376)
73 TIGR02006 IscS cysteine desulf 99.9 1.2E-19 2.6E-24 212.8 32.3 309 631-974 46-380 (402)
74 PTZ00094 serine hydroxymethylt 99.9 7.5E-20 1.6E-24 217.4 30.8 305 632-975 79-412 (452)
75 PRK13580 serine hydroxymethylt 99.9 5.7E-20 1.2E-24 214.7 29.1 307 630-972 93-446 (493)
76 COG4992 ArgD Ornithine/acetylo 99.9 4.7E-20 1E-24 206.8 26.3 320 589-974 51-401 (404)
77 PLN02409 serine--glyoxylate am 99.9 1E-19 2.2E-24 213.2 29.7 323 170-529 12-368 (401)
78 PRK02769 histidine decarboxyla 99.9 1.7E-19 3.7E-24 208.6 30.9 284 207-530 61-369 (380)
79 PLN02651 cysteine desulfurase 99.9 1.1E-19 2.5E-24 210.1 29.3 293 630-959 41-364 (364)
80 PRK03080 phosphoserine aminotr 99.9 1E-19 2.2E-24 211.6 28.6 297 210-529 47-369 (378)
81 TIGR01814 kynureninase kynuren 99.9 2E-19 4.3E-24 211.1 30.5 304 632-969 71-405 (406)
82 cd06451 AGAT_like Alanine-glyo 99.8 2.4E-19 5.3E-24 206.4 27.7 293 209-528 30-352 (356)
83 COG0112 GlyA Glycine/serine hy 99.8 1.7E-19 3.6E-24 199.4 24.4 297 632-971 72-390 (413)
84 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 6.5E-19 1.4E-23 204.3 30.2 308 629-971 48-368 (370)
85 PLN02409 serine--glyoxylate am 99.8 6.7E-19 1.5E-23 206.3 30.4 315 629-972 39-373 (401)
86 PLN02955 8-amino-7-oxononanoat 99.8 1.3E-19 2.9E-24 211.4 24.1 312 164-529 106-457 (476)
87 TIGR01788 Glu-decarb-GAD gluta 99.8 1.5E-18 3.2E-23 203.6 32.8 348 139-529 15-425 (431)
88 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 1.1E-18 2.5E-23 203.4 31.8 306 632-971 63-381 (387)
89 PRK14012 cysteine desulfurase; 99.8 1.7E-18 3.7E-23 203.1 33.1 311 632-975 49-383 (404)
90 TIGR02326 transamin_PhnW 2-ami 99.8 1.2E-18 2.7E-23 201.3 30.9 318 171-528 7-357 (363)
91 TIGR02326 transamin_PhnW 2-ami 99.8 1.2E-18 2.6E-23 201.3 30.6 316 630-970 33-361 (363)
92 PLN02271 serine hydroxymethylt 99.8 9.1E-19 2E-23 205.0 29.1 311 632-970 194-539 (586)
93 PRK14012 cysteine desulfurase; 99.8 2.2E-18 4.8E-23 202.2 31.6 290 210-529 48-375 (404)
94 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1.3E-18 2.9E-23 199.6 29.0 313 630-968 29-354 (355)
95 PLN03032 serine decarboxylase; 99.8 2.4E-18 5.2E-23 197.9 30.0 281 207-529 62-372 (374)
96 PRK13479 2-aminoethylphosphona 99.8 4E-18 8.6E-23 197.3 32.1 316 630-971 35-363 (368)
97 TIGR01822 2am3keto_CoA 2-amino 99.8 1.5E-18 3.3E-23 202.6 28.1 280 205-528 77-384 (393)
98 TIGR03531 selenium_SpcS O-phos 99.8 2.3E-18 5.1E-23 201.2 28.8 365 560-968 29-443 (444)
99 KOG1359 Glycine C-acetyltransf 99.8 1.6E-19 3.4E-24 190.5 16.6 309 164-528 71-407 (417)
100 TIGR01366 serC_3 phosphoserine 99.8 3E-18 6.4E-23 197.9 28.0 327 172-529 8-356 (361)
101 TIGR03235 DNA_S_dndA cysteine 99.8 9.7E-18 2.1E-22 193.1 30.7 262 207-500 38-319 (353)
102 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1E-17 2.2E-22 192.2 30.6 320 172-528 4-352 (355)
103 PRK13479 2-aminoethylphosphona 99.8 1.7E-17 3.7E-22 192.1 32.0 319 170-528 8-358 (368)
104 cd00378 SHMT Serine-glycine hy 99.8 6.1E-18 1.3E-22 198.2 27.9 293 637-972 70-386 (402)
105 PTZ00094 serine hydroxymethylt 99.8 5.4E-18 1.2E-22 201.6 26.9 283 209-528 77-403 (452)
106 TIGR03811 tyr_de_CO2_Ent tyros 99.8 1.3E-17 2.8E-22 201.0 30.2 337 569-930 61-522 (608)
107 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 2.6E-17 5.7E-22 192.0 31.0 283 207-528 59-376 (387)
108 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 3E-17 6.5E-22 190.4 31.3 284 205-528 45-363 (370)
109 PLN03227 serine palmitoyltrans 99.8 1.1E-17 2.4E-22 195.2 26.8 311 164-529 2-378 (392)
110 PRK05937 8-amino-7-oxononanoat 99.8 1.2E-17 2.7E-22 193.6 26.8 314 166-528 10-345 (370)
111 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 2.4E-17 5.1E-22 190.5 28.5 302 634-969 46-360 (361)
112 TIGR01821 5aminolev_synth 5-am 99.8 9.5E-18 2E-22 196.7 24.9 313 165-529 50-392 (402)
113 PLN03226 serine hydroxymethylt 99.8 4.5E-17 9.8E-22 193.5 29.9 309 637-977 85-425 (475)
114 PRK13034 serine hydroxymethylt 99.8 4.1E-17 8.8E-22 191.9 29.1 297 632-970 70-391 (416)
115 PRK07179 hypothetical protein; 99.8 1.4E-17 2.9E-22 195.7 24.8 309 166-529 60-394 (407)
116 PRK00011 glyA serine hydroxyme 99.8 4.3E-17 9.4E-22 192.0 28.4 292 637-971 76-389 (416)
117 COG0161 BioA Adenosylmethionin 99.8 2.5E-17 5.5E-22 189.0 25.2 340 593-974 57-446 (449)
118 cd00611 PSAT_like Phosphoserin 99.8 1.2E-17 2.6E-22 192.6 22.6 313 177-528 7-351 (355)
119 PLN02483 serine palmitoyltrans 99.8 7.2E-17 1.6E-21 193.2 29.8 317 164-529 104-462 (489)
120 COG0436 Aspartate/tyrosine/aro 99.8 5.3E-17 1.1E-21 189.0 27.8 332 590-971 29-391 (393)
121 PF00464 SHMT: Serine hydroxym 99.8 1.4E-17 3.1E-22 190.8 22.5 289 632-963 66-397 (399)
122 TIGR03246 arg_catab_astC succi 99.8 1.4E-16 3E-21 186.6 31.1 319 592-971 47-395 (397)
123 COG0075 Serine-pyruvate aminot 99.8 2E-16 4.3E-21 179.6 30.9 312 630-973 36-365 (383)
124 PRK04073 rocD ornithine--oxo-a 99.8 1.3E-16 2.8E-21 186.8 30.3 314 592-969 52-395 (396)
125 TIGR01822 2am3keto_CoA 2-amino 99.8 7.4E-17 1.6E-21 188.4 27.9 296 628-972 79-390 (393)
126 TIGR01437 selA_rel uncharacter 99.8 1.1E-16 2.3E-21 185.2 28.2 298 631-969 44-363 (363)
127 TIGR01821 5aminolev_synth 5-am 99.8 6.9E-17 1.5E-21 189.4 26.7 296 629-972 87-397 (402)
128 cd00616 AHBA_syn 3-amino-5-hyd 99.8 4.1E-17 9E-22 187.3 24.3 301 633-966 19-352 (352)
129 PRK13393 5-aminolevulinate syn 99.8 4.3E-17 9.3E-22 191.5 24.9 312 166-529 51-392 (406)
130 TIGR01364 serC_1 phosphoserine 99.8 7.5E-17 1.6E-21 185.2 26.2 281 211-528 37-343 (349)
131 COG0160 GabT 4-aminobutyrate a 99.8 3.4E-16 7.5E-21 180.9 31.4 332 590-972 66-446 (447)
132 PRK07179 hypothetical protein; 99.8 1.2E-16 2.6E-21 187.8 28.2 286 633-971 100-398 (407)
133 COG3844 Kynureninase [Amino ac 99.8 8.4E-17 1.8E-21 172.8 24.2 297 216-528 81-397 (407)
134 KOG1549 Cysteine desulfurase N 99.8 9.6E-17 2.1E-21 181.2 25.8 173 628-813 79-257 (428)
135 PRK05964 adenosylmethionine--8 99.8 1.3E-16 2.7E-21 188.4 28.1 336 591-971 53-422 (423)
136 cd00609 AAT_like Aspartate ami 99.8 1.2E-16 2.6E-21 182.1 27.0 295 628-966 36-349 (350)
137 PRK09064 5-aminolevulinate syn 99.8 5.8E-17 1.2E-21 190.4 25.0 312 165-529 51-393 (407)
138 PRK05937 8-amino-7-oxononanoat 99.8 2.1E-16 4.7E-21 183.3 29.0 292 625-973 49-352 (370)
139 PRK05355 3-phosphoserine/phosp 99.8 6.1E-17 1.3E-21 186.8 24.1 313 172-528 8-353 (360)
140 KOG1549 Cysteine desulfurase N 99.8 8.5E-17 1.8E-21 181.6 24.3 321 170-529 46-414 (428)
141 PRK13392 5-aminolevulinate syn 99.8 8.4E-17 1.8E-21 189.2 25.5 310 167-528 53-392 (410)
142 PRK00854 rocD ornithine--oxo-a 99.8 4.5E-16 9.7E-21 182.5 31.0 317 592-969 53-399 (401)
143 cd06454 KBL_like KBL_like; thi 99.8 9.4E-17 2E-21 184.0 24.5 291 629-968 43-348 (349)
144 TIGR03235 DNA_S_dndA cysteine 99.8 3.4E-16 7.3E-21 180.3 29.0 270 631-935 41-319 (353)
145 cd06450 DOPA_deC_like DOPA dec 99.7 1.5E-16 3.3E-21 182.2 25.2 262 206-528 33-343 (345)
146 PLN02721 threonine aldolase 99.7 1.7E-16 3.7E-21 182.2 25.3 292 634-970 42-351 (353)
147 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 4.7E-17 1E-21 187.4 20.3 266 211-518 66-416 (417)
148 PRK13392 5-aminolevulinate syn 99.7 2.7E-16 5.8E-21 184.9 27.0 294 630-971 89-397 (410)
149 cd06502 TA_like Low-specificit 99.7 6.9E-17 1.5E-21 184.4 21.4 288 633-967 33-337 (338)
150 PRK13393 5-aminolevulinate syn 99.7 3.4E-16 7.3E-21 183.9 27.7 296 629-972 87-397 (406)
151 PRK15029 arginine decarboxylas 99.7 1.5E-16 3.2E-21 195.1 24.7 278 211-528 205-599 (755)
152 PRK13034 serine hydroxymethylt 99.7 4.8E-16 1E-20 182.9 28.1 282 204-528 64-387 (416)
153 PRK06943 adenosylmethionine--8 99.7 7.6E-16 1.7E-20 182.6 29.6 337 592-972 66-447 (453)
154 PRK09064 5-aminolevulinate syn 99.7 3.8E-16 8.1E-21 183.5 26.7 294 629-972 88-398 (407)
155 PRK03080 phosphoserine aminotr 99.7 2.9E-16 6.4E-21 182.6 25.5 309 631-974 47-376 (378)
156 PRK07678 aminotransferase; Val 99.7 7.6E-16 1.7E-20 182.7 29.4 344 592-972 59-450 (451)
157 TIGR03372 putres_am_tran putre 99.7 7.3E-16 1.6E-20 181.7 28.8 320 591-968 86-441 (442)
158 cd06454 KBL_like KBL_like; thi 99.7 5.1E-16 1.1E-20 177.9 26.5 276 206-528 41-346 (349)
159 PRK07482 hypothetical protein; 99.7 1.5E-15 3.3E-20 180.6 31.4 343 592-973 62-456 (461)
160 PLN02822 serine palmitoyltrans 99.7 5.6E-16 1.2E-20 185.2 27.4 279 202-529 145-473 (481)
161 cd06452 SepCysS Sep-tRNA:Cys-t 99.7 2.2E-15 4.8E-20 174.1 31.5 278 211-528 44-357 (361)
162 PRK11522 putrescine--2-oxoglut 99.7 9.2E-16 2E-20 182.0 28.6 327 591-975 93-455 (459)
163 PRK01278 argD acetylornithine 99.7 1.2E-15 2.5E-20 178.3 28.9 320 592-971 43-388 (389)
164 COG0076 GadB Glutamate decarbo 99.7 7E-16 1.5E-20 181.6 26.8 328 139-502 31-403 (460)
165 PRK05965 hypothetical protein; 99.7 2.6E-15 5.6E-20 178.5 31.9 341 592-973 58-449 (459)
166 TIGR01141 hisC histidinol-phos 99.7 2E-16 4.4E-21 181.5 21.6 280 635-966 57-346 (346)
167 PRK03244 argD acetylornithine 99.7 1.6E-15 3.4E-20 177.8 29.5 280 635-973 88-396 (398)
168 PRK06173 adenosylmethionine--8 99.7 1.8E-15 3.9E-20 178.3 30.0 332 592-972 56-426 (429)
169 PLN02624 ornithine-delta-amino 99.7 2E-15 4.4E-20 180.2 30.7 293 634-971 119-444 (474)
170 PLN02724 Molybdenum cofactor s 99.7 7.8E-16 1.7E-20 194.5 28.2 319 628-971 74-488 (805)
171 PRK06939 2-amino-3-ketobutyrat 99.7 9.3E-16 2E-20 179.0 26.9 297 627-972 82-394 (397)
172 TIGR01825 gly_Cac_T_rel pyrido 99.7 8.7E-16 1.9E-20 178.8 26.5 295 627-971 73-381 (385)
173 PLN02483 serine palmitoyltrans 99.7 1.2E-15 2.6E-20 182.7 28.1 297 629-972 143-467 (489)
174 PRK09221 beta alanine--pyruvat 99.7 3.6E-15 7.9E-20 176.6 31.6 339 592-972 61-444 (445)
175 PRK05958 8-amino-7-oxononanoat 99.7 1E-15 2.2E-20 177.8 26.6 291 628-968 80-384 (385)
176 KOG1360 5-aminolevulinate synt 99.7 1.5E-16 3.3E-21 173.9 17.6 311 167-528 178-519 (570)
177 PRK06225 aspartate aminotransf 99.7 1.8E-15 4E-20 176.1 28.0 297 634-974 68-379 (380)
178 PRK12381 bifunctional succinyl 99.7 3.2E-15 6.9E-20 175.6 30.1 322 592-974 51-402 (406)
179 cd00609 AAT_like Aspartate ami 99.7 3.2E-15 7E-20 170.3 29.2 305 171-528 3-349 (350)
180 PRK06108 aspartate aminotransf 99.7 2.4E-15 5.2E-20 174.9 28.6 300 627-969 60-380 (382)
181 PRK13360 omega amino acid--pyr 99.7 2.7E-15 5.8E-20 177.6 29.2 339 592-972 58-441 (442)
182 PLN02760 4-aminobutyrate:pyruv 99.7 6E-15 1.3E-19 176.7 32.0 342 592-973 101-493 (504)
183 PRK03715 argD acetylornithine 99.7 3.7E-15 7.9E-20 174.2 29.5 320 592-972 48-394 (395)
184 PLN02263 serine decarboxylase 99.7 7.4E-15 1.6E-19 171.7 31.8 333 151-530 76-440 (470)
185 PRK06939 2-amino-3-ketobutyrat 99.7 2.1E-15 4.4E-20 176.1 27.4 315 166-528 43-388 (397)
186 TIGR01885 Orn_aminotrans ornit 99.7 4.4E-15 9.5E-20 174.2 29.8 292 632-969 79-400 (401)
187 TIGR00858 bioF 8-amino-7-oxono 99.7 1.8E-15 4E-20 173.8 26.0 288 629-966 58-360 (360)
188 PRK05764 aspartate aminotransf 99.7 5.3E-15 1.1E-19 172.8 30.2 306 628-971 68-391 (393)
189 TIGR03576 pyridox_MJ0158 pyrid 99.7 3.3E-15 7.1E-20 171.5 27.4 311 151-529 8-343 (346)
190 PRK09264 diaminobutyrate--2-ox 99.7 1.1E-14 2.4E-19 172.0 32.4 332 591-979 50-424 (425)
191 PRK05630 adenosylmethionine--8 99.7 4.6E-15 9.9E-20 174.6 28.9 329 592-971 52-420 (422)
192 PRK07030 adenosylmethionine--8 99.7 7.7E-15 1.7E-19 174.6 30.7 338 592-972 59-447 (466)
193 PRK06541 hypothetical protein; 99.7 1.3E-14 2.9E-19 172.4 32.6 339 592-973 64-457 (460)
194 PRK08742 adenosylmethionine--8 99.7 1E-14 2.2E-19 173.5 31.7 341 592-973 76-469 (472)
195 PRK08114 cystathionine beta-ly 99.7 5.1E-15 1.1E-19 171.5 28.1 211 215-468 66-284 (395)
196 PLN02590 probable tyrosine dec 99.7 4.9E-15 1.1E-19 177.3 28.6 360 139-529 101-528 (539)
197 PRK06916 adenosylmethionine--8 99.7 8.7E-15 1.9E-19 174.1 30.4 342 592-972 68-456 (460)
198 TIGR01437 selA_rel uncharacter 99.7 3.7E-15 8E-20 172.4 26.5 296 180-528 25-360 (363)
199 PRK04612 argD acetylornithine 99.7 1.2E-14 2.5E-19 170.6 30.8 323 592-973 52-405 (408)
200 PRK06105 aminotransferase; Pro 99.7 8.9E-15 1.9E-19 174.0 30.0 342 592-974 60-452 (460)
201 PLN02955 8-amino-7-oxononanoat 99.7 3.5E-15 7.7E-20 174.6 25.9 298 628-972 143-462 (476)
202 PRK07986 adenosylmethionine--8 99.7 6.5E-15 1.4E-19 173.4 28.4 330 592-971 55-423 (428)
203 PRK13578 ornithine decarboxyla 99.7 1.1E-15 2.3E-20 185.8 22.1 282 211-528 174-560 (720)
204 PLN02880 tyrosine decarboxylas 99.7 3.6E-15 7.8E-20 178.2 26.3 360 140-529 54-480 (490)
205 PRK06767 methionine gamma-lyas 99.7 4.1E-15 8.9E-20 173.5 26.2 272 214-527 64-383 (386)
206 KOG2862 Alanine-glyoxylate ami 99.7 9.1E-15 2E-19 156.4 26.2 325 169-529 19-378 (385)
207 PRK15029 arginine decarboxylas 99.7 4.8E-15 1E-19 182.0 27.8 306 633-971 206-604 (755)
208 PLN03227 serine palmitoyltrans 99.7 7.5E-15 1.6E-19 171.5 28.2 298 633-972 44-383 (392)
209 PRK08117 4-aminobutyrate amino 99.7 1.6E-14 3.4E-19 171.2 31.3 330 591-972 54-430 (433)
210 PRK05957 aspartate aminotransf 99.7 1E-14 2.2E-19 170.4 29.2 303 627-971 64-385 (389)
211 PRK06917 hypothetical protein; 99.7 2E-14 4.3E-19 170.4 31.6 342 592-974 43-440 (447)
212 PTZ00125 ornithine aminotransf 99.7 1.9E-14 4.1E-19 168.6 31.2 292 633-973 74-397 (400)
213 PRK07483 hypothetical protein; 99.7 2.4E-14 5.2E-19 169.6 32.2 343 591-974 41-440 (443)
214 PRK05093 argD bifunctional N-s 99.7 1.9E-14 4.1E-19 169.0 31.1 288 634-971 84-400 (403)
215 PLN00175 aminotransferase fami 99.7 1.3E-14 2.7E-19 170.9 29.6 331 590-970 55-412 (413)
216 PRK07481 hypothetical protein; 99.7 1.8E-14 3.8E-19 171.0 30.6 339 592-972 54-446 (449)
217 cd00616 AHBA_syn 3-amino-5-hyd 99.7 6.4E-15 1.4E-19 169.1 26.2 279 212-528 19-352 (352)
218 PRK00950 histidinol-phosphate 99.7 2.7E-15 5.9E-20 173.2 23.1 282 635-969 72-360 (361)
219 cd00614 CGS_like CGS_like: Cys 99.7 1.6E-14 3.5E-19 167.5 29.1 214 212-468 41-261 (369)
220 TIGR00858 bioF 8-amino-7-oxono 99.7 1.1E-14 2.3E-19 167.5 27.2 274 207-528 57-360 (360)
221 PRK07682 hypothetical protein; 99.7 7.5E-15 1.6E-19 170.8 26.2 300 628-971 57-376 (378)
222 PRK13238 tnaA tryptophanase/L- 99.7 3.3E-14 7.1E-19 168.8 31.9 318 634-989 80-451 (460)
223 PRK07681 aspartate aminotransf 99.7 1.7E-14 3.7E-19 169.1 29.2 296 628-967 69-384 (399)
224 PRK07480 putative aminotransfe 99.7 2.8E-14 6.1E-19 169.5 31.0 342 592-974 62-451 (456)
225 TIGR01324 cysta_beta_ly_B cyst 99.7 9.2E-15 2E-19 169.6 26.2 211 214-467 53-269 (377)
226 PRK05769 4-aminobutyrate amino 99.7 3.7E-14 8E-19 168.0 31.7 323 592-971 66-439 (441)
227 PRK05968 hypothetical protein; 99.7 5E-15 1.1E-19 172.8 23.9 273 213-528 65-385 (389)
228 PRK08593 4-aminobutyrate amino 99.7 3.5E-14 7.7E-19 168.3 31.3 333 592-981 54-436 (445)
229 PRK08064 cystathionine beta-ly 99.7 2.3E-14 5E-19 167.3 29.3 274 212-529 55-382 (390)
230 PLN02822 serine palmitoyltrans 99.7 1.9E-14 4.1E-19 172.2 29.0 299 628-972 150-478 (481)
231 PRK09028 cystathionine beta-ly 99.7 3.3E-14 7.2E-19 165.2 30.2 211 215-468 65-281 (394)
232 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 8.4E-16 1.8E-20 177.0 16.2 289 633-956 67-416 (417)
233 TIGR00508 bioA adenosylmethion 99.7 2.9E-14 6.3E-19 168.2 29.4 331 593-971 58-426 (427)
234 PRK04013 argD acetylornithine/ 99.7 2E-14 4.4E-19 165.7 27.4 299 592-972 36-361 (364)
235 PRK09082 methionine aminotrans 99.7 1.4E-14 3E-19 169.1 26.4 344 573-967 19-385 (386)
236 TIGR02407 ectoine_ectB diamino 99.7 3.5E-14 7.6E-19 166.9 29.7 324 592-971 47-412 (412)
237 PRK11658 UDP-4-amino-4-deoxy-L 99.7 1.9E-14 4.1E-19 167.6 27.1 305 634-969 35-377 (379)
238 TIGR01329 cysta_beta_ly_E cyst 99.7 1.8E-14 4E-19 167.4 26.9 242 213-498 49-317 (378)
239 PRK12389 glutamate-1-semialdeh 99.7 2.9E-14 6.3E-19 168.4 28.8 319 592-971 65-427 (428)
240 PRK06058 4-aminobutyrate amino 99.7 3.8E-14 8.2E-19 168.2 29.9 326 592-971 68-442 (443)
241 PRK12403 putative aminotransfe 99.7 7.3E-14 1.6E-18 166.2 32.1 337 592-973 66-454 (460)
242 cd00615 Orn_deC_like Ornithine 99.7 1.8E-15 3.9E-20 170.1 17.5 166 633-814 60-236 (294)
243 PRK07324 transaminase; Validat 99.7 3E-14 6.6E-19 165.5 28.1 292 636-970 66-369 (373)
244 PRK08360 4-aminobutyrate amino 99.7 5.8E-14 1.2E-18 166.3 30.7 334 591-981 52-433 (443)
245 PRK05355 3-phosphoserine/phosp 99.7 4.4E-15 9.5E-20 171.4 20.7 298 630-970 46-357 (360)
246 cd00610 OAT_like Acetyl ornith 99.7 3.7E-14 8E-19 166.7 28.9 295 631-968 78-412 (413)
247 PRK07495 4-aminobutyrate amino 99.7 6.2E-14 1.3E-18 165.3 30.8 330 592-973 52-423 (425)
248 TIGR01328 met_gam_lyase methio 99.7 1.7E-14 3.6E-19 168.5 25.6 214 214-468 62-281 (391)
249 PRK06062 hypothetical protein; 99.6 5.3E-14 1.1E-18 167.0 30.2 330 592-974 65-448 (451)
250 COG0156 BioF 7-keto-8-aminopel 99.6 1.7E-14 3.7E-19 165.4 24.8 290 627-968 79-387 (388)
251 PRK13580 serine hydroxymethylt 99.6 1.6E-14 3.6E-19 169.2 25.0 275 216-528 100-440 (493)
252 PRK06207 aspartate aminotransf 99.6 4.4E-14 9.5E-19 166.0 28.9 303 628-972 78-403 (405)
253 TIGR01141 hisC histidinol-phos 99.6 3.7E-14 8E-19 162.8 27.7 298 172-528 25-346 (346)
254 TIGR03537 DapC succinyldiamino 99.6 3.8E-14 8.3E-19 163.2 27.7 297 628-967 36-349 (350)
255 PRK07309 aromatic amino acid a 99.6 5.6E-14 1.2E-18 164.4 29.3 305 628-972 67-389 (391)
256 PRK02731 histidinol-phosphate 99.6 1.8E-14 3.9E-19 166.9 24.8 285 635-970 70-365 (367)
257 PRK14807 histidinol-phosphate 99.6 3.1E-14 6.7E-19 164.1 26.6 283 635-969 62-350 (351)
258 PLN02482 glutamate-1-semialdeh 99.6 2.4E-14 5.3E-19 170.1 26.3 320 592-972 111-474 (474)
259 TIGR00709 dat 2,4-diaminobutyr 99.6 1E-13 2.2E-18 164.5 31.4 327 592-972 51-436 (442)
260 KOG1402 Ornithine aminotransfe 99.6 2.8E-14 6E-19 153.5 23.8 334 572-969 57-425 (427)
261 COG2008 GLY1 Threonine aldolas 99.6 7.9E-15 1.7E-19 162.1 20.2 292 630-969 33-341 (342)
262 PRK07582 cystathionine gamma-l 99.6 3.9E-14 8.5E-19 164.0 27.1 271 214-528 54-364 (366)
263 cd06502 TA_like Low-specificit 99.6 1.5E-14 3.3E-19 165.1 23.3 272 213-528 34-336 (338)
264 PRK05639 4-aminobutyrate amino 99.6 1.1E-13 2.4E-18 164.3 31.4 329 592-973 65-445 (457)
265 PRK06290 aspartate aminotransf 99.6 5.7E-14 1.2E-18 165.2 28.5 306 628-972 81-406 (410)
266 PRK07036 hypothetical protein; 99.6 1.8E-13 3.9E-18 163.0 33.0 341 592-974 63-455 (466)
267 PRK08361 aspartate aminotransf 99.6 4E-14 8.7E-19 165.5 26.9 301 628-970 70-389 (391)
268 cd00378 SHMT Serine-glycine hy 99.6 2.9E-14 6.2E-19 167.2 25.7 277 211-529 64-381 (402)
269 PRK06938 diaminobutyrate--2-ox 99.6 1.3E-13 2.8E-18 164.0 31.5 328 592-972 75-461 (464)
270 PRK05387 histidinol-phosphate 99.6 2.5E-14 5.4E-19 164.7 24.8 283 635-970 63-352 (353)
271 TIGR03588 PseC UDP-4-keto-6-de 99.6 4.6E-14 1E-18 164.4 27.2 305 634-969 31-380 (380)
272 PRK06082 4-aminobutyrate amino 99.6 8.8E-14 1.9E-18 165.4 29.9 328 592-974 83-454 (459)
273 PRK15407 lipopolysaccharide bi 99.6 4.9E-14 1.1E-18 166.5 27.5 372 568-970 2-435 (438)
274 TIGR01825 gly_Cac_T_rel pyrido 99.6 3.6E-14 7.9E-19 165.2 25.8 277 205-529 72-377 (385)
275 PRK05942 aspartate aminotransf 99.6 5.7E-14 1.2E-18 164.4 27.4 296 627-969 72-387 (394)
276 TIGR01366 serC_3 phosphoserine 99.6 2.2E-14 4.8E-19 165.8 23.6 301 631-971 40-360 (361)
277 PRK13578 ornithine decarboxyla 99.6 3.5E-14 7.6E-19 172.8 26.2 308 634-971 176-565 (720)
278 PRK04635 histidinol-phosphate 99.6 2E-14 4.4E-19 165.8 23.0 281 635-967 63-351 (354)
279 TIGR03799 NOD_PanD_pyr putativ 99.6 1.7E-13 3.6E-18 164.4 31.5 293 206-525 124-517 (522)
280 PRK03158 histidinol-phosphate 99.6 3.6E-14 7.9E-19 163.8 25.0 282 634-968 66-358 (359)
281 PLN00144 acetylornithine trans 99.6 1.3E-13 2.8E-18 160.6 29.6 317 592-971 27-380 (382)
282 PRK09105 putative aminotransfe 99.6 5.3E-14 1.2E-18 163.3 26.3 280 634-969 80-368 (370)
283 PRK06234 methionine gamma-lyas 99.6 4.4E-14 9.4E-19 165.5 25.7 274 214-528 67-396 (400)
284 TIGR00474 selA seryl-tRNA(sec) 99.6 1E-13 2.2E-18 163.5 28.8 303 180-527 93-453 (454)
285 PRK05958 8-amino-7-oxononanoat 99.6 9.9E-14 2.1E-18 161.2 28.3 276 205-528 78-382 (385)
286 COG0001 HemL Glutamate-1-semia 99.6 1.3E-13 2.7E-18 156.9 28.0 292 633-974 94-431 (432)
287 TIGR01325 O_suc_HS_sulf O-succ 99.6 5.1E-14 1.1E-18 163.9 25.6 213 213-468 56-274 (380)
288 PRK04311 selenocysteine syntha 99.6 9.4E-14 2E-18 164.3 28.1 305 180-528 98-459 (464)
289 PRK08133 O-succinylhomoserine 99.6 6.1E-14 1.3E-18 163.7 26.1 213 213-468 63-281 (390)
290 PRK00011 glyA serine hydroxyme 99.6 9.3E-14 2E-18 163.7 27.8 271 216-528 76-384 (416)
291 PRK07505 hypothetical protein; 99.6 7.4E-14 1.6E-18 163.9 26.4 291 631-971 90-399 (402)
292 PRK09792 4-aminobutyrate trans 99.6 2.9E-13 6.2E-18 159.7 31.4 327 592-970 52-420 (421)
293 PRK07504 O-succinylhomoserine 99.6 8.4E-14 1.8E-18 162.9 26.5 212 214-468 68-286 (398)
294 PRK01688 histidinol-phosphate 99.6 2.4E-14 5.1E-19 165.1 21.5 280 635-966 60-351 (351)
295 PRK08134 O-acetylhomoserine am 99.6 2.9E-14 6.3E-19 168.0 22.7 143 212-360 65-213 (433)
296 PRK08064 cystathionine beta-ly 99.6 3.7E-14 7.9E-19 165.6 23.3 283 633-968 55-383 (390)
297 PRK08960 hypothetical protein; 99.6 1.6E-13 3.6E-18 160.1 28.8 296 628-965 69-381 (387)
298 PF00155 Aminotran_1_2: Aminot 99.6 1.3E-14 2.8E-19 167.4 19.1 287 636-965 48-363 (363)
299 PLN03026 histidinol-phosphate 99.6 7.2E-14 1.6E-18 162.8 25.4 284 635-968 89-379 (380)
300 PRK05967 cystathionine beta-ly 99.6 1.2E-13 2.7E-18 160.2 27.0 211 214-467 67-283 (395)
301 PRK08912 hypothetical protein; 99.6 1.4E-13 3.1E-18 160.6 27.8 300 628-969 63-384 (387)
302 PRK08248 O-acetylhomoserine am 99.6 4.8E-14 1E-18 166.2 23.9 142 214-361 67-214 (431)
303 PRK15400 lysine decarboxylase 99.6 2.8E-14 6.1E-19 173.4 22.4 273 211-528 195-554 (714)
304 PRK07337 aminotransferase; Val 99.6 1.4E-13 3E-18 160.8 27.5 302 628-967 67-385 (388)
305 PRK07777 aminotransferase; Val 99.6 1.5E-13 3.2E-18 160.6 27.7 298 628-968 61-383 (387)
306 PRK15399 lysine decarboxylase 99.6 7.5E-14 1.6E-18 169.8 25.9 272 211-528 195-554 (713)
307 PRK02936 argD acetylornithine 99.6 3.7E-13 8.1E-18 156.5 30.9 306 592-968 41-376 (377)
308 PRK06176 cystathionine gamma-s 99.6 9.6E-14 2.1E-18 161.4 25.8 212 213-468 52-270 (380)
309 PRK07046 aminotransferase; Val 99.6 8.8E-14 1.9E-18 165.0 25.8 329 591-972 86-451 (453)
310 PRK12414 putative aminotransfe 99.6 1.3E-13 2.8E-18 160.9 26.7 297 627-967 65-383 (384)
311 TIGR01364 serC_1 phosphoserine 99.6 5.1E-14 1.1E-18 161.9 22.9 297 630-970 35-347 (349)
312 TIGR03540 DapC_direct LL-diami 99.6 3.1E-13 6.8E-18 157.5 29.7 294 628-965 67-380 (383)
313 PRK07550 hypothetical protein; 99.6 2.7E-13 5.9E-18 158.2 29.2 349 571-968 15-384 (386)
314 PRK09148 aminotransferase; Val 99.6 3E-13 6.5E-18 159.0 29.6 308 628-974 68-393 (405)
315 PRK06777 4-aminobutyrate amino 99.6 3.5E-13 7.5E-18 159.0 29.9 322 592-969 52-419 (421)
316 PRK10534 L-threonine aldolase; 99.6 3.9E-14 8.4E-19 161.8 21.3 282 634-969 36-331 (333)
317 PRK07050 cystathionine beta-ly 99.6 7.8E-14 1.7E-18 162.9 23.9 213 213-468 67-286 (394)
318 PRK01533 histidinol-phosphate 99.6 4.3E-14 9.4E-19 163.8 21.7 279 635-971 67-355 (366)
319 PRK15400 lysine decarboxylase 99.6 1.3E-13 2.8E-18 167.7 26.5 298 634-971 197-559 (714)
320 TIGR00699 GABAtrns_euk 4-amino 99.6 3.6E-13 7.8E-18 159.3 29.7 322 592-968 70-463 (464)
321 PRK08861 cystathionine gamma-s 99.6 9.8E-14 2.1E-18 161.3 24.4 217 634-896 55-280 (388)
322 PLN00145 tyrosine/nicotianamin 99.6 8.6E-13 1.9E-17 156.2 32.8 313 628-973 94-426 (430)
323 cd00614 CGS_like CGS_like: Cys 99.6 1.3E-13 2.8E-18 160.1 25.3 210 634-889 42-257 (369)
324 PRK08068 transaminase; Reviewe 99.6 3.4E-13 7.4E-18 157.6 29.0 294 628-966 70-384 (389)
325 TIGR03531 selenium_SpcS O-phos 99.6 3.9E-13 8.6E-18 157.5 29.3 342 139-528 28-441 (444)
326 TIGR01328 met_gam_lyase methio 99.6 9.9E-14 2.1E-18 162.0 24.1 219 634-896 61-287 (391)
327 PRK06149 hypothetical protein; 99.6 2.4E-13 5.1E-18 175.1 29.8 329 592-971 595-970 (972)
328 PRK07810 O-succinylhomoserine 99.6 1.5E-13 3.3E-18 160.9 25.7 212 214-468 73-291 (403)
329 PRK02627 acetylornithine amino 99.6 4.9E-13 1.1E-17 156.4 29.9 289 632-971 81-394 (396)
330 PRK08114 cystathionine beta-ly 99.6 8.6E-14 1.9E-18 161.4 23.1 217 634-896 64-290 (395)
331 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 2E-13 4.4E-18 158.0 26.1 213 213-468 57-278 (386)
332 PLN02242 methionine gamma-lyas 99.6 2.1E-13 4.5E-18 160.3 26.5 217 213-470 78-302 (418)
333 PRK09276 LL-diaminopimelate am 99.6 4.4E-13 9.6E-18 156.3 28.9 294 628-965 69-382 (385)
334 PRK07812 O-acetylhomoserine am 99.6 1.6E-13 3.5E-18 161.7 25.2 231 215-468 73-321 (436)
335 PRK08153 histidinol-phosphate 99.6 3.1E-13 6.8E-18 156.8 27.3 290 635-973 70-367 (369)
336 TIGR00713 hemL glutamate-1-sem 99.6 2.3E-13 5.1E-18 160.8 26.6 320 592-971 60-422 (423)
337 PRK08249 cystathionine gamma-s 99.6 3.1E-13 6.7E-18 158.1 27.2 213 213-468 66-284 (398)
338 cd00611 PSAT_like Phosphoserin 99.6 5.9E-14 1.3E-18 162.0 20.9 295 630-968 42-353 (355)
339 PRK05968 hypothetical protein; 99.6 1.1E-13 2.4E-18 161.5 23.4 283 634-972 65-387 (389)
340 PLN02509 cystathionine beta-ly 99.6 1.6E-13 3.5E-18 162.3 24.9 212 213-468 135-353 (464)
341 PRK00615 glutamate-1-semialdeh 99.6 2.4E-13 5.1E-18 160.3 26.3 328 592-974 65-431 (433)
342 PRK07811 cystathionine gamma-s 99.6 5.3E-13 1.1E-17 155.8 28.9 213 213-468 63-282 (388)
343 PRK09147 succinyldiaminopimela 99.6 7.4E-13 1.6E-17 155.1 30.2 297 628-969 65-394 (396)
344 PRK06931 diaminobutyrate--2-ox 99.6 7.3E-13 1.6E-17 157.6 30.3 328 592-973 70-456 (459)
345 PRK04870 histidinol-phosphate 99.6 3.4E-13 7.5E-18 155.6 26.6 282 635-968 66-355 (356)
346 PRK07504 O-succinylhomoserine 99.6 2E-13 4.4E-18 159.8 24.9 216 634-896 67-292 (398)
347 COG0079 HisC Histidinol-phosph 99.6 4.6E-13 1E-17 153.7 27.2 284 634-971 59-354 (356)
348 PRK08574 cystathionine gamma-s 99.6 2.8E-13 6.1E-18 157.8 25.9 212 213-468 55-273 (385)
349 TIGR00707 argD acetylornithine 99.6 5.9E-13 1.3E-17 154.7 28.6 291 633-968 70-378 (379)
350 TIGR01264 tyr_amTase_E tyrosin 99.6 7.5E-13 1.6E-17 155.3 29.3 263 679-971 118-399 (401)
351 PRK03321 putative aminotransfe 99.6 1.8E-13 4E-18 157.5 23.7 282 634-970 59-350 (352)
352 PLN03226 serine hydroxymethylt 99.6 2.7E-13 5.7E-18 161.5 25.5 283 217-528 86-414 (475)
353 PRK08297 L-lysine aminotransfe 99.6 4.7E-13 1E-17 158.6 27.5 330 591-972 56-442 (443)
354 PRK08861 cystathionine gamma-s 99.6 3.1E-13 6.8E-18 157.1 25.5 212 214-468 56-274 (388)
355 TIGR01329 cysta_beta_ly_E cyst 99.6 1.9E-13 4.2E-18 158.9 23.7 283 634-971 49-375 (378)
356 PLN02187 rooty/superroot1 99.6 1.1E-12 2.5E-17 156.4 30.8 310 627-974 107-441 (462)
357 PRK07503 methionine gamma-lyas 99.6 1E-12 2.2E-17 154.1 29.6 215 213-468 67-287 (403)
358 PRK06348 aspartate aminotransf 99.6 1.2E-12 2.6E-17 152.8 30.1 299 628-967 66-381 (384)
359 PRK05613 O-acetylhomoserine am 99.6 2.9E-13 6.2E-18 159.6 25.0 144 213-362 71-220 (437)
360 PRK06148 hypothetical protein; 99.6 4E-13 8.7E-18 173.1 28.4 328 592-972 634-1011(1013)
361 KOG2467 Glycine/serine hydroxy 99.6 6.2E-13 1.3E-17 144.9 25.1 354 580-976 46-431 (477)
362 PRK06702 O-acetylhomoserine am 99.6 5.5E-13 1.2E-17 156.4 26.9 295 213-530 63-425 (432)
363 PRK09028 cystathionine beta-ly 99.6 2.5E-13 5.4E-18 157.9 23.8 217 634-896 63-287 (394)
364 PRK08247 cystathionine gamma-s 99.6 4.5E-13 9.9E-18 155.3 25.9 228 213-484 54-289 (366)
365 TIGR02379 ECA_wecE TDP-4-keto- 99.6 7.7E-13 1.7E-17 153.7 27.7 305 633-969 32-375 (376)
366 TIGR03251 LAT_fam L-lysine 6-t 99.6 4.5E-13 9.8E-18 158.4 26.1 326 591-967 49-430 (431)
367 PF00282 Pyridoxal_deC: Pyrido 99.6 1.3E-13 2.8E-18 159.7 20.9 312 138-482 9-372 (373)
368 PRK07503 methionine gamma-lyas 99.6 3.9E-13 8.4E-18 157.6 25.2 212 634-889 67-283 (403)
369 PLN02656 tyrosine transaminase 99.6 9.7E-13 2.1E-17 154.8 28.7 304 628-970 73-402 (409)
370 PRK07269 cystathionine gamma-s 99.6 7.3E-13 1.6E-17 153.1 27.0 236 214-493 57-301 (364)
371 PLN02721 threonine aldolase 99.6 4E-13 8.7E-18 154.3 24.8 273 213-529 42-348 (353)
372 PRK13355 bifunctional HTH-doma 99.6 8.3E-13 1.8E-17 159.9 28.7 308 627-971 184-514 (517)
373 TIGR01140 L_thr_O3P_dcar L-thr 99.6 4E-13 8.6E-18 153.6 24.5 270 635-966 50-330 (330)
374 PRK07366 succinyldiaminopimela 99.6 6.3E-13 1.4E-17 155.3 26.7 300 628-968 68-387 (388)
375 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 7.4E-13 1.6E-17 154.0 27.1 307 633-969 32-374 (375)
376 PRK04311 selenocysteine syntha 99.6 5.8E-13 1.2E-17 157.6 26.3 294 633-970 128-463 (464)
377 PRK08248 O-acetylhomoserine am 99.6 5.1E-13 1.1E-17 157.6 25.6 143 634-796 66-213 (431)
378 TIGR00700 GABAtrnsam 4-aminobu 99.6 2.5E-12 5.4E-17 151.8 31.5 325 592-969 45-418 (420)
379 PRK07671 cystathionine beta-ly 99.6 6.2E-13 1.3E-17 154.6 25.9 212 213-468 52-270 (377)
380 PRK06767 methionine gamma-lyas 99.6 2.3E-13 5E-18 158.8 22.4 285 634-971 63-385 (386)
381 PRK08776 cystathionine gamma-s 99.6 6.2E-13 1.4E-17 155.8 25.7 217 634-896 62-287 (405)
382 COG1982 LdcC Arginine/lysine/o 99.6 2.2E-13 4.7E-18 159.7 21.6 279 211-528 70-403 (557)
383 KOG1404 Alanine-glyoxylate ami 99.6 2.2E-13 4.7E-18 150.3 20.2 322 592-965 62-432 (442)
384 PRK06107 aspartate aminotransf 99.5 9.7E-13 2.1E-17 154.5 27.3 306 628-971 70-400 (402)
385 TIGR03576 pyridox_MJ0158 pyrid 99.5 4.9E-13 1.1E-17 153.6 24.0 281 629-968 51-344 (346)
386 cd00617 Tnase_like Tryptophana 99.5 1.1E-12 2.4E-17 154.0 27.4 320 634-989 55-426 (431)
387 PRK07683 aminotransferase A; V 99.5 1.6E-12 3.4E-17 151.9 28.6 300 628-970 65-382 (387)
388 PRK03317 histidinol-phosphate 99.5 8.2E-13 1.8E-17 153.2 26.0 289 629-970 66-363 (368)
389 PRK06918 4-aminobutyrate amino 99.5 2.4E-12 5.2E-17 153.3 30.5 332 592-974 66-446 (451)
390 PRK05613 O-acetylhomoserine am 99.5 1.1E-12 2.4E-17 154.6 27.1 145 633-796 70-219 (437)
391 TIGR00474 selA seryl-tRNA(sec) 99.5 6.2E-13 1.4E-17 156.9 24.9 294 632-965 122-453 (454)
392 PRK06234 methionine gamma-lyas 99.5 5.6E-13 1.2E-17 156.2 24.4 219 634-896 66-294 (400)
393 TIGR01324 cysta_beta_ly_B cyst 99.5 3.1E-13 6.8E-18 156.8 22.0 217 634-896 52-276 (377)
394 PRK06084 O-acetylhomoserine am 99.5 7.3E-13 1.6E-17 156.1 25.4 234 215-468 62-312 (425)
395 PRK15399 lysine decarboxylase 99.5 1.6E-12 3.6E-17 158.2 28.8 299 634-971 197-559 (713)
396 PRK07568 aspartate aminotransf 99.5 2.1E-12 4.5E-17 151.3 28.9 257 679-972 111-393 (397)
397 COG0626 MetC Cystathionine bet 99.5 2.1E-12 4.7E-17 147.9 28.0 214 213-468 65-286 (396)
398 PTZ00433 tyrosine aminotransfe 99.5 1E-12 2.3E-17 154.7 26.2 307 628-973 75-410 (412)
399 PF01041 DegT_DnrJ_EryC1: DegT 99.5 7.6E-13 1.6E-17 153.3 24.6 302 632-966 25-363 (363)
400 PRK06460 hypothetical protein; 99.5 2.3E-12 4.9E-17 149.9 28.6 213 212-467 46-264 (376)
401 TIGR01365 serC_2 phosphoserine 99.5 8E-13 1.7E-17 152.4 24.5 294 210-528 38-368 (374)
402 PRK05166 histidinol-phosphate 99.5 1.4E-12 3E-17 151.5 26.8 282 636-969 75-369 (371)
403 PRK05994 O-acetylhomoserine am 99.5 1.1E-12 2.4E-17 154.8 26.0 153 214-375 66-224 (427)
404 PRK05939 hypothetical protein; 99.5 1.8E-12 3.9E-17 151.5 27.4 229 634-896 49-294 (397)
405 PRK08574 cystathionine gamma-s 99.5 8.6E-13 1.9E-17 153.8 24.6 216 634-896 55-279 (385)
406 PRK08776 cystathionine gamma-s 99.5 1.2E-12 2.5E-17 153.5 25.7 212 214-468 63-281 (405)
407 PRK07811 cystathionine gamma-s 99.5 6.4E-13 1.4E-17 155.1 23.4 214 634-896 63-288 (388)
408 PRK08134 O-acetylhomoserine am 99.5 7E-13 1.5E-17 156.4 23.8 144 633-796 65-213 (433)
409 KOG1383 Glutamate decarboxylas 99.5 1.5E-12 3.2E-17 146.9 25.0 352 139-529 54-442 (491)
410 PRK08056 threonine-phosphate d 99.5 1.7E-12 3.6E-17 150.0 26.4 282 634-969 57-353 (356)
411 PRK02731 histidinol-phosphate 99.5 3.2E-12 6.9E-17 148.1 28.9 264 214-528 70-361 (367)
412 PRK08045 cystathionine gamma-s 99.5 2.3E-12 5E-17 150.1 27.7 272 214-528 55-381 (386)
413 PRK07812 O-acetylhomoserine am 99.5 2.9E-12 6.3E-17 151.1 28.7 230 634-896 71-327 (436)
414 PRK08133 O-succinylhomoserine 99.5 2.9E-13 6.3E-18 158.0 20.2 256 634-966 63-327 (390)
415 PRK15481 transcriptional regul 99.5 1.8E-12 3.8E-17 153.7 27.1 252 679-970 164-430 (431)
416 KOG2862 Alanine-glyoxylate ami 99.5 2.6E-12 5.5E-17 137.9 25.3 308 630-971 48-382 (385)
417 PRK00062 glutamate-1-semialdeh 99.5 1.4E-12 3E-17 154.3 26.0 322 592-972 62-425 (426)
418 PRK05994 O-acetylhomoserine am 99.5 2.3E-12 5.1E-17 152.1 27.8 143 634-796 65-212 (427)
419 PLN02242 methionine gamma-lyas 99.5 3.6E-13 7.7E-18 158.4 20.6 260 634-967 78-348 (418)
420 PRK07582 cystathionine gamma-l 99.5 1.1E-12 2.3E-17 152.1 24.2 275 634-966 53-364 (366)
421 PLN02509 cystathionine beta-ly 99.5 4.9E-13 1.1E-17 158.2 21.2 217 633-896 134-359 (464)
422 TIGR03538 DapC_gpp succinyldia 99.5 3E-12 6.6E-17 149.8 27.7 296 627-967 63-391 (393)
423 PRK07908 hypothetical protein; 99.5 2E-12 4.3E-17 148.9 25.8 280 634-970 60-346 (349)
424 TIGR01325 O_suc_HS_sulf O-succ 99.5 7.9E-13 1.7E-17 154.0 22.6 209 634-889 56-270 (380)
425 KOG0629 Glutamate decarboxylas 99.5 5.9E-13 1.3E-17 147.8 20.1 323 625-968 134-506 (510)
426 PRK07050 cystathionine beta-ly 99.5 1E-12 2.3E-17 153.5 23.5 286 634-971 67-391 (394)
427 COG1982 LdcC Arginine/lysine/o 99.5 1.6E-12 3.4E-17 152.6 24.6 305 634-966 72-403 (557)
428 PRK08363 alanine aminotransfer 99.5 2.8E-12 6.1E-17 150.4 27.1 306 628-971 70-394 (398)
429 PRK08249 cystathionine gamma-s 99.5 1.3E-12 2.8E-17 152.9 24.0 218 633-896 65-290 (398)
430 PRK04781 histidinol-phosphate 99.5 3E-12 6.5E-17 148.4 26.8 286 635-970 62-362 (364)
431 PRK11658 UDP-4-amino-4-deoxy-L 99.5 1.8E-12 3.9E-17 151.0 24.9 287 213-528 35-374 (379)
432 PLN00143 tyrosine/nicotianamin 99.5 1.2E-11 2.7E-16 145.5 32.2 312 628-971 74-404 (409)
433 PRK07810 O-succinylhomoserine 99.5 8E-13 1.7E-17 154.9 22.0 211 634-890 72-288 (403)
434 COG2873 MET17 O-acetylhomoseri 99.5 2.1E-12 4.4E-17 142.1 23.5 232 216-468 67-315 (426)
435 COG3844 Kynureninase [Amino ac 99.5 3E-12 6.4E-17 138.2 24.2 309 629-972 73-403 (407)
436 PRK06176 cystathionine gamma-s 99.5 8.7E-13 1.9E-17 153.4 21.7 209 634-889 52-266 (380)
437 TIGR02080 O_succ_thio_ly O-suc 99.5 4.7E-12 1E-16 147.4 27.7 212 214-468 54-272 (382)
438 PRK05387 histidinol-phosphate 99.5 5.4E-12 1.2E-16 145.3 28.0 268 215-528 64-348 (353)
439 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 3.5E-12 7.7E-17 150.3 26.9 142 214-361 60-207 (418)
440 cd01494 AAT_I Aspartate aminot 99.5 4.6E-13 1E-17 136.0 16.9 161 634-812 2-170 (170)
441 PRK06358 threonine-phosphate d 99.5 3.2E-12 7E-17 147.5 25.8 281 635-969 57-353 (354)
442 cd00615 Orn_deC_like Ornithine 99.5 1.2E-13 2.6E-18 155.3 13.7 154 211-378 59-236 (294)
443 TIGR01265 tyr_nico_aTase tyros 99.5 1.3E-11 2.9E-16 145.0 31.4 297 636-970 77-400 (403)
444 PRK08175 aminotransferase; Val 99.5 8.5E-12 1.8E-16 146.2 29.2 305 627-970 66-388 (395)
445 PRK05939 hypothetical protein; 99.5 5.9E-12 1.3E-16 147.2 27.3 142 213-361 49-196 (397)
446 PRK08636 aspartate aminotransf 99.5 8.2E-12 1.8E-16 146.7 28.6 307 627-971 70-400 (403)
447 COG0399 WecE Predicted pyridox 99.5 8.8E-12 1.9E-16 142.1 27.7 297 634-970 36-372 (374)
448 PRK09265 aminotransferase AlaT 99.5 9.3E-12 2E-16 146.3 28.8 301 628-971 72-401 (404)
449 PRK05967 cystathionine beta-ly 99.5 2E-12 4.3E-17 150.2 22.6 218 633-896 65-290 (395)
450 PLN02271 serine hydroxymethylt 99.5 2.7E-12 5.8E-17 151.1 23.6 291 216-528 199-535 (586)
451 PRK02610 histidinol-phosphate 99.5 4.9E-12 1.1E-16 147.1 25.4 286 636-971 70-371 (374)
452 KOG1368 Threonine aldolase [Am 99.5 5.4E-13 1.2E-17 142.1 15.6 286 635-966 59-363 (384)
453 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 7.1E-12 1.5E-16 147.8 26.8 156 634-813 59-219 (418)
454 PRK06434 cystathionine gamma-l 99.5 6.4E-12 1.4E-16 145.8 25.8 211 213-468 66-282 (384)
455 TIGR03588 PseC UDP-4-keto-6-de 99.5 4.1E-12 8.9E-17 148.1 24.4 289 213-528 31-377 (380)
456 PRK08088 4-aminobutyrate amino 99.5 1.7E-11 3.7E-16 145.0 29.9 328 592-972 53-424 (425)
457 PRK08045 cystathionine gamma-s 99.5 2.9E-12 6.3E-17 149.3 22.9 217 634-896 54-279 (386)
458 PRK06460 hypothetical protein; 99.5 7.9E-12 1.7E-16 145.4 26.4 217 634-896 47-271 (376)
459 PRK04260 acetylornithine amino 99.5 2.2E-11 4.7E-16 141.7 29.7 262 650-968 86-374 (375)
460 KOG0257 Kynurenine aminotransf 99.5 6.3E-12 1.4E-16 140.8 23.9 296 572-910 18-344 (420)
461 PTZ00376 aspartate aminotransf 99.5 3.2E-12 6.9E-17 150.3 22.7 298 627-970 71-402 (404)
462 PRK06425 histidinol-phosphate 99.5 6.7E-12 1.5E-16 143.6 24.7 277 634-969 42-331 (332)
463 PRK05839 hypothetical protein; 99.5 9.2E-12 2E-16 144.9 26.0 290 628-970 60-373 (374)
464 PRK00854 rocD ornithine--oxo-a 99.5 2.4E-11 5.3E-16 142.6 29.8 276 211-528 83-396 (401)
465 PRK05664 threonine-phosphate d 99.5 8.7E-12 1.9E-16 142.6 25.2 272 635-972 52-329 (330)
466 PRK06225 aspartate aminotransf 99.5 2.8E-11 6E-16 141.1 29.9 304 171-529 33-372 (380)
467 KOG0053 Cystathionine beta-lya 99.5 4.2E-12 9.1E-17 143.8 22.0 161 214-383 80-247 (409)
468 PRK06836 aspartate aminotransf 99.5 1.8E-11 3.9E-16 143.4 28.4 297 628-971 73-391 (394)
469 PTZ00377 alanine aminotransfer 99.5 2.9E-11 6.3E-16 145.3 30.8 313 628-974 115-478 (481)
470 PRK07269 cystathionine gamma-s 99.5 6.2E-12 1.3E-16 145.4 24.0 215 634-897 56-279 (364)
471 PLN02376 1-aminocyclopropane-1 99.5 1.9E-11 4.2E-16 146.8 28.9 308 627-973 93-440 (496)
472 PRK07671 cystathionine beta-ly 99.5 4.4E-12 9.5E-17 147.5 22.3 209 634-889 52-266 (377)
473 PRK07505 hypothetical protein; 99.5 3.1E-11 6.8E-16 141.7 29.6 316 164-528 45-394 (402)
474 PRK06084 O-acetylhomoserine am 99.4 2E-11 4.2E-16 144.0 27.6 143 634-796 60-207 (425)
475 COG1103 Archaea-specific pyrid 99.4 2.8E-11 6.2E-16 127.4 25.3 297 634-971 63-380 (382)
476 PRK06702 O-acetylhomoserine am 99.4 1.1E-11 2.4E-16 145.5 24.7 144 634-796 63-211 (432)
477 PRK09105 putative aminotransfe 99.4 3E-11 6.4E-16 140.4 28.0 266 213-528 80-365 (370)
478 PRK14809 histidinol-phosphate 99.4 1.8E-11 3.8E-16 141.5 25.8 278 635-970 68-356 (357)
479 PF00155 Aminotran_1_2: Aminot 99.4 1.4E-11 3E-16 142.2 24.7 280 194-527 36-363 (363)
480 PRK06108 aspartate aminotransf 99.4 5.3E-11 1.1E-15 138.6 29.6 277 208-528 62-377 (382)
481 PRK05957 aspartate aminotransf 99.4 5.5E-11 1.2E-15 139.1 29.7 306 170-528 31-380 (389)
482 PRK06209 glutamate-1-semialdeh 99.4 9.3E-12 2E-16 147.3 23.1 324 592-974 60-408 (431)
483 KOG0259 Tyrosine aminotransfer 99.4 4.8E-11 1E-15 131.5 26.6 321 618-973 96-435 (447)
484 TIGR02080 O_succ_thio_ly O-suc 99.4 1.3E-11 2.9E-16 143.6 23.9 217 634-896 53-278 (382)
485 PRK07865 N-succinyldiaminopime 99.4 1.5E-11 3.2E-16 142.5 24.0 284 628-966 62-363 (364)
486 PRK07908 hypothetical protein; 99.4 4.5E-11 9.7E-16 137.7 27.5 297 172-528 28-342 (349)
487 PLN02974 adenosylmethionine-8- 99.4 6.8E-11 1.5E-15 147.8 30.8 304 634-969 411-816 (817)
488 PRK07590 L,L-diaminopimelate a 99.4 4E-11 8.6E-16 141.2 27.4 353 570-968 17-408 (409)
489 PRK08247 cystathionine gamma-s 99.4 1.4E-11 3E-16 142.9 23.1 209 634-889 54-268 (366)
490 PRK06959 putative threonine-ph 99.4 3E-11 6.6E-16 138.6 25.3 273 635-974 56-336 (339)
491 COG1103 Archaea-specific pyrid 99.4 3.7E-11 7.9E-16 126.6 23.3 276 212-528 62-375 (382)
492 PRK06855 aminotransferase; Val 99.4 6E-11 1.3E-15 140.7 28.0 312 627-971 72-429 (433)
493 PRK03967 histidinol-phosphate 99.4 3E-11 6.6E-16 138.5 24.3 273 635-971 58-334 (337)
494 PRK03158 histidinol-phosphate 99.4 7.7E-11 1.7E-15 136.2 27.8 265 213-528 66-356 (359)
495 PF01041 DegT_DnrJ_EryC1: DegT 99.4 2.6E-11 5.6E-16 140.6 23.5 281 212-528 26-363 (363)
496 TIGR02618 tyr_phenol_ly tyrosi 99.4 2.5E-11 5.3E-16 140.8 23.1 318 634-989 73-444 (450)
497 PLN02607 1-aminocyclopropane-1 99.4 9E-11 1.9E-15 139.5 28.3 308 627-973 94-439 (447)
498 PF01053 Cys_Met_Meta_PP: Cys/ 99.4 3.7E-11 7.9E-16 139.3 23.8 218 633-896 56-284 (386)
499 PRK07865 N-succinyldiaminopime 99.4 3E-10 6.5E-15 131.6 31.5 254 226-528 84-363 (364)
500 PRK07049 methionine gamma-lyas 99.4 3.3E-11 7.2E-16 142.2 23.9 219 635-896 86-321 (427)
No 1
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-247 Score=2040.20 Aligned_cols=938 Identities=69% Similarity=1.132 Sum_probs=899.3
Q ss_pred ccccccccCCCCccccccCCCCCHHHHHHHHHHhCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhc
Q 001579 84 TRGISVEALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLAS 162 (1050)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~ 162 (1050)
++++....+++.|+|.+|||||++.|+++||+++|++|+|+|++++||++| +++++.+| ++++|.|++++++.+|+
T Consensus 38 ~~~~~~~~~~~~d~F~~RHigp~~~dq~~ml~tlG~~dl~~l~~~~VP~~Ir~~~~l~~~---~~~~E~eml~~l~~ia~ 114 (1001)
T KOG2040|consen 38 TRSQSERIFPPLDTFPRRHIGPSPTDQQQMLDTLGYKDLDELIEKTVPKSIRLKRPLKMD---KPLCESEMLQHLEDIAS 114 (1001)
T ss_pred hcchhhhccCcccccccccCCCCchHHHHHHHhcChhhHHHHHHhhcchhhcccchhcCC---CCcCHHHHHHHHHHHHh
Confidence 344455667889999999999999999999999999999999999999999 99999997 89999999999999999
Q ss_pred CCCccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHH
Q 001579 163 MNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAE 242 (1050)
Q Consensus 163 ~n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~e 242 (1050)
||+.|++|||+|||++++|++|+||+++||+|||+|||||||||||+||.++|||+||+||||++.+|+||+|+|||++|
T Consensus 115 kNk~~ksfIGmGYyn~~vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaE 194 (1001)
T KOG2040|consen 115 KNKIWKSFIGMGYYNTHVPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAE 194 (1001)
T ss_pred hhhHHHHhhccccccccCcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhhccCCCeeEEEEEcCCCCeeEccHHHHHHHH
Q 001579 243 AMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNA 322 (1050)
Q Consensus 243 A~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~l~~~t~~V~v~~pn~~G~i~di~~I~~~a 322 (1050)
||.|+.+.+ ++++++|+..+||+++++++|+++++|++++..++.+.....+++++|+||||++.|.|.|+.++++.+
T Consensus 195 Am~l~~~~~--krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~~~~~~s~~~v~gvlvQYP~t~G~i~d~~el~~~a 272 (1001)
T KOG2040|consen 195 AMALCNRIN--KRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDIKEADYSSKDVSGVLVQYPDTEGSVLDFDELVELA 272 (1001)
T ss_pred HHHHHHhhc--ccceEEecCCCCcchhhhhhccccccceeEEecCHHHhhccccceeEEEEEcCCCCCcccCHHHHHHHh
Confidence 999998876 678899999999999999999999999999988876554445679999999999999999999999999
Q ss_pred HhCCcEEEEEecCccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEE
Q 001579 323 HANGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRV 402 (1050)
Q Consensus 323 h~~galliV~a~~~alg~l~~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l 402 (1050)
|+.|.++++++|+++|.++++||+|||||++||+|+||+||||||||+|||+|+++++|.||||+||+|+|+.|+++|+|
T Consensus 273 ~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RL 352 (1001)
T KOG2040|consen 273 HANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRL 352 (1001)
T ss_pred hccCceEEEeehhhHHHccCChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEec
Q 001579 403 AMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC 482 (1050)
Q Consensus 403 ~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~ 482 (1050)
+||||||||||+||||||||+|+|+|+|+|||+.|||++||++|++|++..+.+|+.+|++.| .++.+.+||||+.|++
T Consensus 353 ALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag-hel~~k~fFDTLkI~~ 431 (1001)
T KOG2040|consen 353 ALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG-HELQHKPFFDTLKIRC 431 (1001)
T ss_pred HHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc-hhhccccccceEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999999998 8999889999999999
Q ss_pred CC-HHHHHHHHHHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhh-----hccCCCCccCCC
Q 001579 483 AD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV-----ETAIPSGLTRES 556 (1050)
Q Consensus 483 ~~-~~~i~~~L~~~GI~~~~~~~~~lris~~e~~t~edId~lv~~l~~~~~~~~~~~~l~~~~-----~~~ip~~~~~~~ 556 (1050)
.. ++++.++..+++||++.+++++|.+|++|+++++|+|.|+.+|..+ +..++..+. ....|+.++|++
T Consensus 432 ~~s~~~~l~rA~~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~~~-----ss~~~~~E~~~~e~~~~~~s~f~Rts 506 (1001)
T KOG2040|consen 432 GCSAEEVLDRAAKRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFNEE-----SSVELVAESMGEECNGIPPSVFKRTS 506 (1001)
T ss_pred cCcHHHHHHHHHhhcCceEEeecCceEEeecccccHHHHHHHHHHHccC-----ChHHHHHHhhhhhccCCCCcccccCC
Confidence 87 9999999999999999999999999999999999999999999865 344443322 124688999999
Q ss_pred CCCCCcccCCCCCHHHHHHHHHHHhccccCcccccccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHH
Q 001579 557 PYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1050)
Q Consensus 557 ~~l~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~e 636 (1050)
+||+||||+.+|||++|+|||++|++||+++.++||||||||||+|+..||.|++|++|.++|||+|.||.|||++++.+
T Consensus 507 ~~L~hpVFn~yhSEt~lvRYm~kLenKDlSLvhSMiPLGSCTMKLNsttEmmPiTwp~fanIHPF~P~eQaqGY~~lf~~ 586 (1001)
T KOG2040|consen 507 PYLTHPVFNSYHSETELVRYMKKLENKDLSLVHSMIPLGSCTMKLNSTTEMMPITWPEFANIHPFAPVEQAQGYQQLFTE 586 (1001)
T ss_pred ccccchhhhhcccHHHHHHHHHHhhccchhhhhhcccccceeeeccccceeccccchhhccCCCCCchHHHhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCCCC
Q 001579 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNIN 716 (1050)
Q Consensus 637 l~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~iD 716 (1050)
|+++||++||+|.+++|||||++|||++|++||+|+.++|+++|++||||.|+||+||++|+|+|+||+.|.++.+|++|
T Consensus 587 Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~~~G~id 666 (1001)
T KOG2040|consen 587 LEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCDANGNID 666 (1001)
T ss_pred HHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeeccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccc
Q 001579 717 IEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFC 796 (1050)
Q Consensus 717 ~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~ 796 (1050)
+.+|+++.++|+++++++|||||+|+|+|+++|+++|+++|+||++||+||||||+++|+++||++|+||||+|+|||||
T Consensus 667 ~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHKTFc 746 (1001)
T KOG2040|consen 667 MVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHKTFC 746 (1001)
T ss_pred HHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCccceecccCCccccccceeecccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHH
Q 001579 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1050)
Q Consensus 797 ~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1050)
|||||||||+|+|+|++||++|||++.|.... +.+.....+.++++|||++++++++|+||+|||..||+++++.++
T Consensus 747 IPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~---~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~Ai 823 (1001)
T KOG2040|consen 747 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPG---RPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAI 823 (1001)
T ss_pred ecCCCCCCCCCccchhhhccccCCCCCccCCC---CCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHh
Confidence 99999999999999999999999999875432 112234567889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHH
Q 001579 877 LNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKE 956 (1050)
Q Consensus 877 ~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~e 956 (1050)
+|||||++||+.+|+++|.++++.++||||+|+++||+..|+++.||+|||+|||||+||++|||+|+|||+|||+++++
T Consensus 824 LNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ 903 (1001)
T KOG2040|consen 824 LNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKA 903 (1001)
T ss_pred hhhHHHHHHHhhccceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccccccCCceEeccCccccHH
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCcccccCCCCCCCCCcccccccCCCCCCCccccCCcccccCCcC
Q 001579 957 ELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGMRVHHTPY 1036 (1050)
Q Consensus 957 eid~fv~aL~~i~~ei~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1050)
|+|||||+|.+|++||++||+|..|++.|+||+|||++.++++|.||||||||+||||+||+|++||||+|+ ||||+|=
T Consensus 904 ElDRfcdAliSIreEI~~ie~G~~dk~~n~Lk~aPH~~~~v~s~~WdrpYsRE~AafP~p~lk~~KfWPtv~-RvDd~YG 982 (1001)
T KOG2040|consen 904 ELDRFCDALISIREEIAQIEEGRQDKRNNPLKMAPHPLEDVTSDNWDRPYSREYAAFPAPFLKENKFWPTVG-RVDDAYG 982 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcccCcccCCCCCHHHhhhhccCCccchhhhcCCchhhhhcccCCccc-ccccccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999984
No 2
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=3.4e-216 Score=1940.12 Aligned_cols=932 Identities=55% Similarity=0.951 Sum_probs=869.8
Q ss_pred ccCCCCccccccCCCCCHHHHHHHHHHhCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccc
Q 001579 90 EALKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYK 168 (1050)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~ 168 (1050)
..+.+.|+|+.|||||+++|+++||++||++|+||||+++||++| ++++|+|| +++||.|++++|+++|+||+.++
T Consensus 5 ~~~~~~~~f~~rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~ir~~~~l~lp---~~~sE~e~~~~~~~~a~kN~~~~ 81 (954)
T PRK12566 5 SQLQEPDAFLRRHLGPDAAEQQAMLDALGVASRAELIEQTVPPAIRLNRPLDLP---AALDEQAALARLRGYAEQNQVWT 81 (954)
T ss_pred cccccccchhhccCCCCHHHHHHHHHhcCccCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCcc
Confidence 336667899999999999999999999999999999988999999 88899998 79999999999999999999999
Q ss_pred cccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHh
Q 001579 169 SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN 248 (1050)
Q Consensus 169 ~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~ 248 (1050)
+|+|+|||+|++|++|+|+|++||+|||+|||||||||||+||+|+|||+|||+|||||++|+||||++||++|||.|+.
T Consensus 82 ~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~ 161 (954)
T PRK12566 82 SLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAK 161 (954)
T ss_pred ccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhhccCCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcE
Q 001579 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVK 328 (1050)
Q Consensus 249 ~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~gal 328 (1050)
+.+++++++|+|++.+||+++++++||++..|+++++.+++++ +++++++|++||||++|.|+|+++|++++|++|++
T Consensus 162 ~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~~~~~~--~~~~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal 239 (954)
T PRK12566 162 RVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVDAVDNL--AAHAVFGALLQYPDTHGEIRDLRPLIDQLHGQQAL 239 (954)
T ss_pred HHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEcchhhc--CCCCEEEEEEECCCCceEEccHHHHHHHHHHcCCE
Confidence 8765457899999999999999999999999999998554332 56789999999999999999999999999999999
Q ss_pred EEEEecCccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEeccccc
Q 001579 329 VVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE 408 (1050)
Q Consensus 329 liV~a~~~alg~l~~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtre 408 (1050)
++|++|+++|+++++||+|||||+||++|+||+||+|||||+|||+++++++|+||||+||+|+|.+|+++|+|+|||||
T Consensus 240 ~~~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtRE 319 (954)
T PRK12566 240 ACVAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTRE 319 (954)
T ss_pred EEEEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecC-CHHH
Q 001579 409 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHA 487 (1050)
Q Consensus 409 q~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~-~~~~ 487 (1050)
||||||||||||||+|+|+|++|++|++|||++||++|+++++.+|+||+++|++.| +++..+++|++|++++. .+.+
T Consensus 320 QHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g-~~~~~~~fF~~~~v~~~~~~~~ 398 (954)
T PRK12566 320 QHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKG-IKRLNRHFFDTLTLEVGGAQAA 398 (954)
T ss_pred HHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC-CccccCCccceEEEEccCCHHH
Confidence 999999999999999999999999999999999999999999999999999999988 99987799999999986 3888
Q ss_pred HHHHHHHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhh-hhccCCCCccCCCCCCCCcccCC
Q 001579 488 IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEE-VETAIPSGLTRESPYLTHPVFNK 566 (1050)
Q Consensus 488 i~~~L~~~GI~~~~~~~~~lris~~e~~t~edId~lv~~l~~~~~~~~~~~~l~~~-~~~~ip~~~~~~~~~l~~p~~~~ 566 (1050)
+.++..++|||++.++++.+.+|++|++|.+||+.|+++|...... .+.+.+... ....||+.++|+++|++||+|++
T Consensus 399 ~~~~a~~~~~n~r~~~~~~~~~s~de~~~~~~~~~~~~~f~~~~~~-~~~~~~~~~~~~~~~p~~~~r~~~~~~~p~f~~ 477 (954)
T PRK12566 399 IIESAEAARINLRILGRGRLGVSLDETCDEATVARLFDIFLGADHG-LDVAALDQGALAEGIPAVLQRRTAYLQHPVFNA 477 (954)
T ss_pred HHHHHHHCCCeeEEeCCCeEEEEeCCCCCHHHHHHHHHHhcCCCcc-cchhhhccccccccCchhhhcCCccccCccccc
Confidence 9999999999999998899999999999999999999999632110 011112110 11249999999999999999999
Q ss_pred CCCHHHHHHHHHHHhccccCcccccccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC
Q 001579 567 YHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG 646 (1050)
Q Consensus 567 ~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G 646 (1050)
++||.||+|||++|++||++++++||||||||||+|++.+++|++|+||.+.|||||.|++||++|+++|+|+++|++||
T Consensus 478 ~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLtG 557 (954)
T PRK12566 478 HHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAITG 557 (954)
T ss_pred CCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCCCCHHHHHHHHHc
Q 001579 647 FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEA 726 (1050)
Q Consensus 647 ~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~ 726 (1050)
||.++++|++|++||++++|++|+||.++|+.+|++||+|.++||+||+++.+.|++|+.|++|++|.+|+++|++++++
T Consensus 558 md~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~a~I~~ 637 (954)
T PRK12566 558 FDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLKAKAAA 637 (954)
T ss_pred CCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHhhc
Confidence 99999999999999999999999999999998899999999999999999999999999999999999999999999988
Q ss_pred CCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCCcc
Q 001579 727 NRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGM 806 (1050)
Q Consensus 727 ~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~ 806 (1050)
+++++++||+++||++|++++++++|+++||++|++|+|||||+++++++..|+++|+|++++|+|||||+|||+||||+
T Consensus 638 ~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~v 717 (954)
T PRK12566 638 AGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGADVSHMNLHKTFCIPHGGGGPGM 717 (954)
T ss_pred cCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCCCEEEecCCcccCcCccCCCCcc
Confidence 88999999999999999998779999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHH
Q 001579 807 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1050)
Q Consensus 807 G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L 886 (1050)
|+|+++++|.+++|+....... +.+++.+++++ +++|+++++++||+||.+||.+ +++.++.++++++|++++|
T Consensus 718 G~iav~~~L~pfLp~~P~~d~~--G~~~r~ga~S~---~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL 791 (954)
T PRK12566 718 GPIGVRAHLAPFVANHPVVPVE--GPDPNNGAVSA---APWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQL 791 (954)
T ss_pred chhhhhhhhhhhccCCCCcCCC--CCCCCCCceee---cccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHh
Confidence 9999999999998865421101 12223333444 4578999999999999999999 9999999999999999999
Q ss_pred hccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 887 EKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 887 ~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
++.++++|.+.+++++|||+++++++++..|++.++|+++|+|+|||+++++||+.++|||||||++|++|||+|+++|+
T Consensus 792 ~~~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~ 871 (954)
T PRK12566 792 GGAFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAML 871 (954)
T ss_pred HhhCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHH
Confidence 98889888665678999999999877665678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCccccCCCCcccccCCCCCCCCCcccccccCCCCCCCccccCCcccccCCcC
Q 001579 967 SIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGMRVHHTPY 1036 (1050)
Q Consensus 967 ~i~~ei~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1050)
+|++|+++|++|+||+++|||||||||+.++++ +|+||||||+|+||++|++++||||+|+ ||||+|=
T Consensus 872 ~I~~e~~~v~~g~~~~~~n~l~~apht~~~~~~-~w~~~y~r~~a~~p~~~~~~~k~wp~v~-r~d~~~g 939 (954)
T PRK12566 872 SIRAEIGKVQEGNWPAEDNPLKRAPHTLADVTG-VWQRPYSIEQAVTPSAHARAHKYWPAVN-RVDNVYG 939 (954)
T ss_pred HHHHHHHHHHcCCCCcccCcccCCCCchHHhhc-cCCCCcChhhcccCCCcccCCCcCCCcC-CcCcccc
Confidence 999999999999999999999999999999998 8999999999999999999999999999 9999983
No 3
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=3.7e-211 Score=1911.23 Aligned_cols=927 Identities=59% Similarity=0.989 Sum_probs=873.5
Q ss_pred cCCCCCHHHHHHHHHHhCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccccccCCCCCCCC
Q 001579 101 RHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNTH 179 (1050)
Q Consensus 101 ~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~lG~g~~~~~ 179 (1050)
|||||+++|+++||++||++|+||||+++||++| ++++++|| +++||.|+++||++|+++|+.+++|+|+|||+|+
T Consensus 1 rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~ 77 (939)
T TIGR00461 1 RHLGPSPSDQKKMLKTMGYSDLNALIEQLVPPNILKRRPLQLE---APSKEYEALAHLKKIASKNHKFKSYIGMGYYGTI 77 (939)
T ss_pred CCCCcCHHHHHHHHHhcCCCCHHHHhhccCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCccccCCCCcCCCc
Confidence 8999999999999999999999999999899999 88899998 7899999999999999999999999999999999
Q ss_pred CcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEE
Q 001579 180 VPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFI 259 (1050)
Q Consensus 180 ~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vl 259 (1050)
+|++|+|++++||+|||+|||||||+|||+||+|+|||+|+++||||+.+|+||+|++||++|||+||.+.+++++++||
T Consensus 78 ~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vl 157 (939)
T TIGR00461 78 LPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFF 157 (939)
T ss_pred CChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876554678999
Q ss_pred EcCCCChhHHHHHHHhccCCCeEEEEcCchhhhc-cCCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccc
Q 001579 260 IASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL 338 (1050)
Q Consensus 260 vs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~al 338 (1050)
|++.+||+++.+++|+++..|++++++|+++|+. + ++++|++|+||++|.++|+++|++++|++|++++|++|++++
T Consensus 158 v~~~~hP~~~~v~~t~a~~~g~~v~~~~~~~l~~~~--~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al 235 (939)
T TIGR00461 158 VAKDLHPQTKSVLHTRAKPFGIEVIVVDCSDIKKAV--DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMAL 235 (939)
T ss_pred ECCCCCcchHHHHHHHHHhcCcEEEEEcHHHHhhcC--CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHh
Confidence 9999999999999999999999999999988876 4 689999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCC
Q 001579 339 TILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 418 (1050)
Q Consensus 339 g~l~~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTs 418 (1050)
+++++||+|||||+||++|+||+||||||||+|||+|+++++|+||||+||+|+|.+|+++|+|+|||||||||||||||
T Consensus 236 ~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtS 315 (939)
T TIGR00461 236 TLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATS 315 (939)
T ss_pred CCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecC--CHHHHHHHHHHcC
Q 001579 419 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--DAHAIASAAYKIE 496 (1050)
Q Consensus 419 nict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~--~~~~i~~~L~~~G 496 (1050)
||||+|+|+|++|++|++|||++||++|+++++.+|++|+++|++.| +++..+++|++|+|+++ .+.+|.++|.++|
T Consensus 316 NICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G-~~~~~~~fF~~~~v~~~~~~~~~i~~~~~~~g 394 (939)
T TIGR00461 316 NICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDP-HELINKTWFDTLTVKVGNGISSELLKAAEEFN 394 (939)
T ss_pred chhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCCccceEEEEeCCCCHHHHHHHHHHCC
Confidence 99999999999999999999999999999999999999999999988 99988899999999987 3889999999999
Q ss_pred ceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHH
Q 001579 497 MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRY 576 (1050)
Q Consensus 497 I~~~~~~~~~lris~~e~~t~edId~lv~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~~p~~~~~~sE~e~~r~ 576 (1050)
|+++...++.+++|+||++|++||+.|+++|..........+.+...+...||+.++|+++++++|+||++|||.||+||
T Consensus 395 i~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~~~f~~~~sE~e~~r~ 474 (939)
T TIGR00461 395 INLRAVDTTTVGIALDETTTKADVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQRTDEILRNEVFNMYHSETEMLRY 474 (939)
T ss_pred CeeeecCCCEEEEEeecCCCHHHHHHHHHHhcCCCccccchhhhhhhhcccCchhhhccCcccCCcccccCCCHHHHHHH
Confidence 99988767899999999999999999999996321100011111111112499999999999999999999999999999
Q ss_pred HHHHhccccCcccccccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCc
Q 001579 577 IHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNA 656 (1050)
Q Consensus 577 ~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~s 656 (1050)
|++|++||++++++||++||||||+|+.+++++++|++|.+||||||.+++||++|+++|+++|||++||||.+++++++
T Consensus 475 ~~~L~~kn~~~~~~fi~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGmd~~Sl~p~a 554 (939)
T TIGR00461 475 LHRLESKDLALNNSMIPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGFDAISLQPNS 554 (939)
T ss_pred HHHHHhcCCCccccCCCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCCCCcccCCch
Confidence 99999999999999999999999999999999999999999999999779999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEE
Q 001579 657 GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMV 736 (1050)
Q Consensus 657 Ga~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~v 736 (1050)
||+||+++|+++|.||+++|+++|++|++|.++||+||+++++.|++|+.|++|++|.+|+++|++++++++++|++||+
T Consensus 555 GA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~i 634 (939)
T TIGR00461 555 GAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMV 634 (939)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEE
Confidence 99999999999999999999888999999999999999999999999999999999999999999999977789999999
Q ss_pred EcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCCcceeeeeccccc
Q 001579 737 TYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA 816 (1050)
Q Consensus 737 t~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~ 816 (1050)
++||++|+++++|++|+++||++|++++|||||+++++++.+||++|+|++++|.||+|++|||+||||+|+++|++++.
T Consensus 635 T~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~ 714 (939)
T TIGR00461 635 TYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLI 714 (939)
T ss_pred EeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhch
Confidence 99999999996699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecC
Q 001579 817 PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRG 896 (1050)
Q Consensus 817 ~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g 896 (1050)
+++||+.++.+.+. .+++..++.+++.++|++++++++|+||++||.+||+++++.+++|||||+++|++.++++|++
T Consensus 715 ~~lPg~~v~~t~d~--~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~~~~l~~~ 792 (939)
T TIGR00461 715 PFLPKHDVVSMITG--IGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDHYPILFVG 792 (939)
T ss_pred hhcCCCcccccccC--CCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhccCcccccC
Confidence 99999987764321 1234444556655789999999999999999999999999999999999999999999999987
Q ss_pred CCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q 001579 897 VNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQIE 976 (1050)
Q Consensus 897 ~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~~~ 976 (1050)
++++++|||+++++++++..|++..||+|+|+|+|||+++++||+.++++|+|||.+|++|||+|+++|++|.+|+++|+
T Consensus 793 ~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~~~ 872 (939)
T TIGR00461 793 TLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINALV 872 (939)
T ss_pred CCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 66789999999999877777899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCCcccccCCCCCCCCCcccccccCCCCCCCccccCCcccccCCcC
Q 001579 977 NGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGMRVHHTPY 1036 (1050)
Q Consensus 977 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1050)
+|+||++||+|||||||+.++++|+|+||||||+||||++|++++||||+|+ ||||+|=
T Consensus 873 ~g~~~~~~~~l~~ap~~~~~~~~~~w~~~y~r~~a~~p~~~~~~~k~wp~v~-r~d~~~g 931 (939)
T TIGR00461 873 AGQPKGQDNPLKNAPHSLQSLITSEWWHPYSREEAAYPAPFLRYNKFWPTVA-RLDDTYG 931 (939)
T ss_pred cCCCCCCcchHhhCCCCHHHhhcCCCCCCcChhhccCCCcccccCCcCCCcC-Ccccccc
Confidence 9999999999999999999999999999999999999999999999999999 9999983
No 4
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=2.7e-202 Score=1857.09 Aligned_cols=943 Identities=86% Similarity=1.358 Sum_probs=875.2
Q ss_pred CCCCccccccCCCCCHHHHHHHHHHhCCCCHHHHhhccCCcccccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcccccc
Q 001579 92 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFI 171 (1050)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~l 171 (1050)
+.+.|.|+.||||||++|+++||++||++|+||||+++||++|++++++||.+.+++||.|+++||++|+++|+.+.||+
T Consensus 29 ~~~~~~f~~r~i~~~~~~~~~ML~~ig~~s~d~l~~~~iP~~i~~~~l~lp~~~~~~sE~e~~~~~~~la~kN~~~~~fi 108 (993)
T PLN02414 29 LKPSDTFPRRHNSATPEEQKAMAEYCGFDSLDALIDATVPKSIRLDSMKLSKYDEGLTESQMLEHMKSLASKNKVFKSYI 108 (993)
T ss_pred cccccchhhccCCcCHHHHHHHHHhcCccCHHHHhhccCCHHHhcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCcccccc
Confidence 44467899999999999999999999999999999888999995558899633368999999999999999999999999
Q ss_pred CCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhh
Q 001579 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1050)
Q Consensus 172 G~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~ 251 (1050)
|+|+|+|++|++|++++++|++|||+|||||||+|||+||+|+|||+|||+||||+++|+||+|++|+++|+++|+.++.
T Consensus 109 G~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~ 188 (993)
T PLN02414 109 GMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIL 188 (993)
T ss_pred CCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhhccCCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEE
Q 001579 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVM 331 (1050)
Q Consensus 252 ~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV 331 (1050)
++++++|||++.+||+++.+|++++++.|+++++++.++....++++.++++|+||++|.+.|+++|+++||++|++++|
T Consensus 189 ~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~~~~~~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV 268 (993)
T PLN02414 189 KGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFDYSSGDVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM 268 (993)
T ss_pred cCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhccccCceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE
Confidence 55678999999999999999999999999999999876532234578899999999999999999999999999999999
Q ss_pred EecCccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccc
Q 001579 332 ATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHI 411 (1050)
Q Consensus 332 ~a~~~alg~l~~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~i 411 (1050)
++|+++++.+++|+++||||++|++|+|++|+||||||+|||++++++.|++|||++|+|+|.+|+++|+++||||||||
T Consensus 269 aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhi 348 (993)
T PLN02414 269 ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHI 348 (993)
T ss_pred EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCCHHHHHHH
Q 001579 412 RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASA 491 (1050)
Q Consensus 412 rRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~i~~~ 491 (1050)
|||||||||||+|+|++.++++|+.|||++|+++|++|++.++++++++|.+.| +++..+++|++|+|+++.+.++.++
T Consensus 349 RrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G-~~~~~~~~f~~vt~~~~~~~~v~~~ 427 (993)
T PLN02414 349 RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLG-FQVQSLPFFDTVKVKCSDADAIADA 427 (993)
T ss_pred hhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcC-CccCCCCCcCeEEEecCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988 9998778899999998668889999
Q ss_pred HHHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHH
Q 001579 492 AYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEH 571 (1050)
Q Consensus 492 L~~~GI~~~~~~~~~lris~~e~~t~edId~lv~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~~p~~~~~~sE~ 571 (1050)
|.++||+++...++.+|+|+||+||++|||+|+++|..........+.+...+...||+.++|++++|+||+|++++||+
T Consensus 428 L~~~gI~l~~~~~~~lrvs~~e~~T~edId~L~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~l~~p~f~~~~se~ 507 (993)
T PLN02414 428 AAKVGINLRVVDANTVTVSFDETTTLEDVDKLFKVFAGGKPVPFTAESLAPEVDSSIPSSLARESPYLTHPIFNQYHSEH 507 (993)
T ss_pred HHHCCCeeEEecCCeEEEEeeccCCHHHHHHHHHHHcccccccchhhhhhhhhcccCchhhhccCccccCcccccccCHH
Confidence 99999999988778899999999999999999999974211110011121111235999999999999999999999999
Q ss_pred HHHHHHHHHhccccCcccccccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeee
Q 001579 572 ELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFS 651 (1050)
Q Consensus 572 e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~ 651 (1050)
||+||+++|++||++++++||||||||||+|+.++|.+++||+|..+|||+|.++.||+++++.++++++++++|++.++
T Consensus 508 ~~~r~~~~l~~~~~~~~~~~~plgsctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g~~~v~ 587 (993)
T PLN02414 508 ELLRYLHRLQNKDLSLVHSMIPLGSCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITGFDSFS 587 (993)
T ss_pred HHHHHHHHHhhcccccccCCccCcccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCE
Q 001579 652 LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNL 731 (1050)
Q Consensus 652 l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~t 731 (1050)
|++|+|+|||+++++++++|++.+|+.+|++||+|.++||+|++.+.+.|++|+.|++|++|.+|+++|+++++++.++|
T Consensus 588 f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~t 667 (993)
T PLN02414 588 LQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIEELRKAAEAHKDNL 667 (993)
T ss_pred EcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHHhccCCCe
Confidence 99999999999999999999988888789999999999999999999999999999999999999999999999766799
Q ss_pred EEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCCcceeeee
Q 001579 732 STLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1050)
Q Consensus 732 aaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v 811 (1050)
++||+++||++|.+++||++|+++||++|++|||||||+++++++..|+++|+|++++|.||||+.|||+||||+|++++
T Consensus 668 a~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~ 747 (993)
T PLN02414 668 AALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 747 (993)
T ss_pred EEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEE
Confidence 99999999998888768999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCC
Q 001579 812 KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP 891 (1050)
Q Consensus 812 ~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~ 891 (1050)
++++.+++||+.++.+....++.+...++.+.+++||+++++++||+||.+||.+|+++++++++++++|++++|++.++
T Consensus 748 ~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~ 827 (993)
T PLN02414 748 KKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYP 827 (993)
T ss_pred chhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999876543111111112234455578999999999999999999999999999999999999999999999
Q ss_pred eeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 892 ILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 892 v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
+.|.+++++++|||+++++++++.+|+++.+|+|+|+|+|||+++++||++++|||+|||++|++|||+|+++|++|+.|
T Consensus 828 ~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 828 VLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred ccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 98887778899999999987776667889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCCccccCCCCcccccCCCCCCCCCcccccccCCCCCCCccccCCcccccCCcC
Q 001579 972 IAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGMRVHHTPY 1036 (1050)
Q Consensus 972 i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1050)
+++|++|+||++||+|||||||+.++++++|+||||||+|+||++|+|++||||+|+ ||||+|=
T Consensus 908 ~~~~~~g~~~~~~~~l~~ap~~~~~~~~~~w~~~y~r~~a~~p~~~~~~~k~~~~v~-r~d~~~g 971 (993)
T PLN02414 908 IADIENGKADRENNVLKGAPHPPSLLMADKWDKPYSREYAAFPAPWVRASKFWPTTG-RVDNVYG 971 (993)
T ss_pred HHHHhcCCCCCCCchhhcCCCChHHhhcCCCCCCcChhhccCCCcccccCccCCCcc-ccccccc
Confidence 999999999999999999999999999999999999999999999999999999999 9999983
No 5
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=6.3e-198 Score=1829.83 Aligned_cols=929 Identities=61% Similarity=1.043 Sum_probs=873.0
Q ss_pred CCCCccccccCCCCCHHHHHHHHHHhCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccccc
Q 001579 92 LKPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSF 170 (1050)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~ 170 (1050)
+.+.|+|++||||||++|+++||++||++|+||||+++||++| ++++++|| +++||.|+++||++||+||+.+++|
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~ml~~~g~~s~~~l~~~~iP~~i~~~~~l~lp---~~~sE~e~~~~~~~la~~N~~~~~~ 80 (954)
T PRK05367 4 LENSDAFARRHIGPSAADQQAMLAALGADSLDALIDQAVPASIRLAEPLDLP---AALSEAEALAELRAIASKNKVFRSY 80 (954)
T ss_pred ccccccccccCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHHHhcCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCcc
Confidence 4557899999999999999999999999999999999999999 88899998 7899999999999999999999999
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhh
Q 001579 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI 250 (1050)
Q Consensus 171 lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~ 250 (1050)
+|+|||+|++|++|+|+|++||+|||+|||||||+|||+||+++|||+|+|+||||+++|+||+|++|+++|+|+|++++
T Consensus 81 ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~ 160 (954)
T PRK05367 81 IGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRV 160 (954)
T ss_pred cCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchh-hhccCCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEE
Q 001579 251 QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-IDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKV 329 (1050)
Q Consensus 251 ~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~-l~~l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~gall 329 (1050)
.++++++|||++.+||+++.+|+++++..|+++++++.++ ++ ++++.+|++|+||++|.+.|+++|+++||++|+++
T Consensus 161 ~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d~~--~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~ 238 (954)
T PRK05367 161 SKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKALD--HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALV 238 (954)
T ss_pred ccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccCCC--cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEE
Confidence 6434689999999999999999999999999999998753 32 35789999999999999999999999999999999
Q ss_pred EEEecCccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccc
Q 001579 330 VMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQ 409 (1050)
Q Consensus 330 iV~a~~~alg~l~~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq 409 (1050)
+|++++++++++++|+++||||++|++|+||+||||||||+|||+++++++|+||||++||++|.+|+++|+|+||||||
T Consensus 239 ~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReq 318 (954)
T PRK05367 239 AVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQ 318 (954)
T ss_pred EEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC-HHHH
Q 001579 410 HIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAI 488 (1050)
Q Consensus 410 ~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~~i 488 (1050)
|||||||||||||+|+++++++++|+.|||++|+++|+++++.+++|++++|++.| +++..+.+|++++++.+. +.+|
T Consensus 319 hiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G-~~~~~~~~f~~~~~~~~~~~~~i 397 (954)
T PRK05367 319 HIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG-LEVVHDSFFDTLTVEVGGDAAAV 397 (954)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC-cccCCCCCCCeEEEeCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999998887 998877889999998865 8999
Q ss_pred HHHHHHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhh----hccCCCCccCCCCCCCCccc
Q 001579 489 ASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV----ETAIPSGLTRESPYLTHPVF 564 (1050)
Q Consensus 489 ~~~L~~~GI~~~~~~~~~lris~~e~~t~edId~lv~~l~~~~~~~~~~~~l~~~~----~~~ip~~~~~~~~~l~~p~~ 564 (1050)
.++|.++||+++...++.||+|+||++|++|||+|+++|+... . ..+.+.... ...||+.++|+++++++|+|
T Consensus 398 ~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~~~~-~--~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~f 474 (954)
T PRK05367 398 LARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFGGAA-L--DVDALDADVADASASALPAALLRTSAYLTHPVF 474 (954)
T ss_pred HHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHcccc-c--chhhhhhhhcccccccCCHHHhcCCcccCCccc
Confidence 9999999999988777899999999999999999999997431 0 112111111 12599999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhccccCcccccccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHh
Q 001579 565 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTI 644 (1050)
Q Consensus 565 ~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael 644 (1050)
++++||+||+|||++|++||++++++||+|||||||+|+.+++.+++|++|.+||||||.|++||+++++.++++|++++
T Consensus 475 ~~~~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~el 554 (954)
T PRK05367 475 NRYHSETEMMRYLRRLEDKDLALDRSMIPLGSCTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEI 554 (954)
T ss_pred CCCCCHHHHHHHHHHHHhcCcCcccceeeCCcCCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCCCCHHHHHHHH
Q 001579 645 TGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAA 724 (1050)
Q Consensus 645 ~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i 724 (1050)
||++.+++++++|++||+++++++|.|+.++|+.+|++||+|+++|++||+++.+.|++|+.|++|++|++|+++|++++
T Consensus 555 tG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i 634 (954)
T PRK05367 555 TGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKA 634 (954)
T ss_pred HCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHH
Confidence 99999999999999999999999999998888777889999999999999999999999999999999999999999999
Q ss_pred HcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCC
Q 001579 725 EANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGP 804 (1050)
Q Consensus 725 ~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGP 804 (1050)
+++++++++||+++|+++|++++||++|+++||++|++|||||||++++.++.+|+++|+|++++|+||||++|||+|||
T Consensus 635 ~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGP 714 (954)
T PRK05367 635 EEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGP 714 (954)
T ss_pred hccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCC
Confidence 87666899999999999999865899999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHH
Q 001579 805 GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAK 884 (1050)
Q Consensus 805 g~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~ 884 (1050)
|+|++++++++.+++||+.++.+. ...+.+.++++++|+++++.++|+|+.+||.+|++++++.++++|+|+++
T Consensus 715 g~G~l~vr~~l~p~lpg~~v~~~~------~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~ 788 (954)
T PRK05367 715 GVGPIGVKAHLAPFLPGHPVQIAG------GETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAK 788 (954)
T ss_pred ceEEEeecccccccCCCCccCcCC------CCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999765432 12234677777899999999999999999999999999999999999999
Q ss_pred HHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHH
Q 001579 885 RLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDA 964 (1050)
Q Consensus 885 ~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~a 964 (1050)
+|++.++++|.+++++++|||++++++++++.|++..+|+|+|+++||++++++||+.+++||+|||++|++|||+|+++
T Consensus 789 ~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~a 868 (954)
T PRK05367 789 RLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDA 868 (954)
T ss_pred HHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHH
Confidence 99999999998877889999999998776666788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCccccCCCCcccccCCCCCCCCCcccccccCCCCCCCccccCCcccccCCcC
Q 001579 965 LISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGMRVHHTPY 1036 (1050)
Q Consensus 965 L~~i~~ei~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1036 (1050)
|++|..|+.+|++|+||++||+|||||||+.+++.++|+||||||+|+||++|++++||||+|+ ||||+|=
T Consensus 869 l~~i~~e~~~~~~~~~~~~~~~~~~ap~~~~~~~~~~w~~~y~r~~~~~p~~~~~~~k~~~~~~-r~~~~~g 939 (954)
T PRK05367 869 MIAIRAEIDEVEAGEWPAEDNPLKNAPHTAADLVADEWDHPYSREQAAFPLPSLRANKYWPPVG-RIDNVYG 939 (954)
T ss_pred HHHHHHHHHHhhcCCCCCCcchhhhCCCCHHHhccCCCCCCCCHHHhcCCCcccccCCcCCCcC-ccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 9999983
No 6
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-118 Score=981.34 Aligned_cols=435 Identities=55% Similarity=0.885 Sum_probs=411.7
Q ss_pred CCCccccccCCCCCHHHHHHHHHHhCCCCHHHHhhccCCccc-cc--CCCCCCCCCCCCCHHHHHHHHHHHhcCCCcccc
Q 001579 93 KPSDTFARRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RI--DSMKFSKFDEGLTESQMIEHMQKLASMNKVYKS 169 (1050)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~--~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~ 169 (1050)
.+.|.|..|||||+++|+++||++||++|+||||+++||++| .+ ..+.+ ++++||.|++++|++++++|+.+.+
T Consensus 2 ~~~~~f~~rh~~P~~~d~~~ML~~iG~~Sld~L~~~~IP~~Ir~~~~~~~~~---~~~~sE~e~l~~l~~ia~kN~~~~s 78 (450)
T COG0403 2 EPLDAFMARHIGPSSADQQEMLAAIGVSSLDELFSQDIPPSIRKKLDTLLPL---PKPLSEYEALAELKEIASKNKVFTS 78 (450)
T ss_pred CccchhhhcCCCCChHHHHHHHHHcCCCCHHHHhhccCCHHHHhcccccCCC---CCCCCHHHHHHHHHHHHhcCchhhh
Confidence 457889999999999999999999999999999998999999 44 22334 4889999999999999999999999
Q ss_pred ccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhh
Q 001579 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN 249 (1050)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~ 249 (1050)
|||+|||+|++|++|+|||++||+|||+|||||||||||+||+|||||+|+|||||||++|+||||++||++|||.||.|
T Consensus 79 fiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r 158 (450)
T COG0403 79 FIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR 158 (450)
T ss_pred hccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhhc----cCCCeeEEEEEcCCCCe-eEccHHHHHHHHHh
Q 001579 250 IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY----KSGDVCGVLVQYPGTEG-EVLDYGDFIKNAHA 324 (1050)
Q Consensus 250 ~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~----l~~~t~~V~v~~pn~~G-~i~di~~I~~~ah~ 324 (1050)
.+++++++|+|+..+||+++++++||++++|++++.++.++++. .+.++++|+|||||++| .+.|+++|++.+|+
T Consensus 159 ~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~ 238 (450)
T COG0403 159 VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQYPNTFGIVEEDLRALIEAAHS 238 (450)
T ss_pred hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEecCCCCCccchhHHHHHHHHhh
Confidence 88667899999999999999999999999999999998876543 24589999999999999 67789999999999
Q ss_pred CCcEEEEEecCccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEec
Q 001579 325 NGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAM 404 (1050)
Q Consensus 325 ~galliV~a~~~alg~l~~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~l 404 (1050)
+|++++|++|+++|+++++||+|||||+||++|+||+||||||||+|||+|+++++|+||||+||+|+|++|+++|+|+|
T Consensus 239 ~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaL 318 (450)
T COG0403 239 AGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLAL 318 (450)
T ss_pred cCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC-CEEEcCCCCccEEEEecC
Q 001579 405 QTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKCA 483 (1050)
Q Consensus 405 qtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G-~~~l~~~~~~~~v~i~~~ 483 (1050)
||||||||||||||||||+|+|+|++|++|++|||++|+++|++|+++++.+|+++|++++ |++++.+.+|++|+++++
T Consensus 319 QTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~ 398 (450)
T COG0403 319 QTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVP 398 (450)
T ss_pred HHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecc
Confidence 9999999999999999999999999999999999999999999999999999999999652 399987799999999998
Q ss_pred -C-HHHHHHHHHHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001579 484 -D-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (1050)
Q Consensus 484 -~-~~~i~~~L~~~GI~~~~~~~~~lris~~e~~t~edId~lv~~l~~~ 530 (1050)
. ...+.++....||+++.++++++.+|+||++|++||+.|+++|...
T Consensus 399 ~~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 399 EEVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred hhHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence 4 7788888888999999998889999999999999999999999753
No 7
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-118 Score=977.11 Aligned_cols=457 Identities=60% Similarity=1.022 Sum_probs=432.6
Q ss_pred CCCCCcccCCC-----CCHHHHHHHHHHHhccccCcccccccccccccCcchhhhhccccccccccCCCCCchhhcccHH
Q 001579 557 PYLTHPVFNKY-----HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQ 631 (1050)
Q Consensus 557 ~~l~~p~~~~~-----~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~ 631 (1050)
.+|++|+|+++ +||.||+||+.+|+++|++++.+||||||||||+|+.++|.+++|++|.++|||||.++.||++
T Consensus 29 ~~L~~~~~r~~~~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l 108 (496)
T COG1003 29 EYLPHPVFRRYPPLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYL 108 (496)
T ss_pred hhcCcHHhhcCCCCccccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccchhhcCCCCChHHHHHHH
Confidence 77888888888 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC
Q 001579 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1050)
Q Consensus 632 ~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~ 711 (1050)
+++.+||+||+++||||.+++||++|+|||+++|++||+||+++|+++|++||||+|||||||++|+|.|++||.|++++
T Consensus 109 ~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~ 188 (496)
T COG1003 109 ELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDE 188 (496)
T ss_pred HHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCC
Q 001579 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNL 791 (1050)
Q Consensus 712 ~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~ 791 (1050)
+|++|++||+++++ ++|+++|||||||+|+||++|.|||+++|++|++||+||||+|+++|+++||++|+||+|+|+
T Consensus 189 ~G~VDlddLk~k~~---~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNL 265 (496)
T COG1003 189 NGNVDLDDLRAKAE---DNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNL 265 (496)
T ss_pred CCCccHHHHHHHhc---cceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEeec
Confidence 99999999999998 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcceeeeecccccCCCCCCc----cccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP----VVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 792 hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~----vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
|||||+||||||||+|+|+|++||++|||++. .+... ......+ +..+++++||++++++++|+||.+||.+|
T Consensus 266 HKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~--~~~~~~~-s~g~~~a~~Gs~~il~~a~~YI~~mG~~G 342 (496)
T COG1003 266 HKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYR--LDYDGKK-SIGVSAAPYGSASILPIAWAYIRMMGADG 342 (496)
T ss_pred ccccccCCCCCCCCCCceehHhhccccCCCCcccCCCcccc--ccCCCCc-cceeeccccCcchHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999999853 22100 0111122 23455579999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC--CCCEE
Q 001579 868 LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--VPGTL 945 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~p--v~~~l 945 (1050)
|+++++.+++|||||+++|++.|+++|.+.+ ++.||||+|.+++++++|+++.||+|||+|+|||+||++|| |.++|
T Consensus 343 L~~ase~AvLNANYia~rL~~~y~~~y~~~~-~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tL 421 (496)
T COG1003 343 LKQASEVAVLNANYIARRLKGYYPVPYTGEN-RVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTL 421 (496)
T ss_pred HHHHHHHHHHhHHHHHHHhhhcCccccCCCC-cceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccce
Confidence 9999999999999999999999999998754 79999999999998889999999999999999999999999 99999
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCcccccCCCCCCCCCcccccccCCCCCCCc
Q 001579 946 MIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAK 1022 (1050)
Q Consensus 946 rI~~te~~t~eeid~fv~aL~~i~~ei~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1022 (1050)
||+|||++||+|||+||++|++|++|++++.+| +.++||+++|||++.++.+.+|+|||+|++++||+++++.+|
T Consensus 422 MIEPTEsEsk~eLDrf~dami~I~~Ea~~~~~~--~~~~~P~~~a~~r~~e~~a~~~~~p~~R~~~~~p~~~~~~~k 496 (496)
T COG1003 422 MIEPTESESKEELDRFIDAMIAIREEADAVPAG--PLKDNPLNTAPHRLDELLAARWDHPYSREEAAYPLGKLRADK 496 (496)
T ss_pred eecCCCCCCHHHHHHHHHHHHHHHHHHHhccCC--ccccCcccCCcchHHHHhhccCCCCeeeehccccccccccCC
Confidence 999999999999999999999999999999988 779999999999999999999999999999999999998665
No 8
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=5.3e-103 Score=891.41 Aligned_cols=425 Identities=44% Similarity=0.665 Sum_probs=331.6
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCccccccCCCCCCC
Q 001579 100 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKVYKSFIGMGYYNT 178 (1050)
Q Consensus 100 ~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~~lG~g~~~~ 178 (1050)
+||||||++|+++||++||++|+||||+++||+++ ++++++|| +++||.|+++|+++|++||+.+.+|+|+|+|+|
T Consensus 1 ~ryi~~t~~~~~~ML~~iG~~sieeL~~~~IP~~i~~~~~~~lp---~~~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~ 77 (429)
T PF02347_consen 1 MRYIPPTDEDIQEMLDAIGVKSIEELFDSDIPEEIRLKKPLNLP---EPLSEYELLRHLERLASKNKSYTSFIGAGSYTH 77 (429)
T ss_dssp -------HHHHHHHHHHCT-SSTGGGG-TTS-GGG-SS-------------HHHHHHHHHHHHTTS--TTS---CTTT--
T ss_pred CCCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHhhcCCCCCCCC---CCCCHHHHHHHHHHHHhcCCCCCccccccccCc
Confidence 59999999999999999999999999977899999 88899998 789999999999999999999999999999999
Q ss_pred CCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEE
Q 001579 179 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (1050)
Q Consensus 179 ~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~V 258 (1050)
++|++|.+|+++||+|||+|||||||+|||+||+|+|||+|+|+|||||.+|+|+||++||++||++|+.|.+++++++|
T Consensus 78 ~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~v 157 (429)
T PF02347_consen 78 YVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKV 157 (429)
T ss_dssp ---HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EE
T ss_pred eeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEE
Confidence 99999998899999999999999999999999999999999999999999999999999999999999988875566799
Q ss_pred EEcCCCChhHHHHHHHhccCCCeEEEEcCchhhhc-cCCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCcc
Q 001579 259 IIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLA 337 (1050)
Q Consensus 259 lvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~a 337 (1050)
+|++.+||+++.+++++++..|++++.++.++-.. .++++++|++|+||++|.++|+++|++++|++|+++++++|+++
T Consensus 158 lv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~~ad~~a 237 (429)
T PF02347_consen 158 LVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTDDDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIVGADPNA 237 (429)
T ss_dssp EEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB-STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEECGGCCG
T ss_pred EEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCccccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEEecCHHH
Confidence 99999999999999999999999999998764322 24789999999999999999999999999999999999999999
Q ss_pred ccCCCCCCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccC
Q 001579 338 LTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1050)
Q Consensus 338 lg~l~~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaT 417 (1050)
++++++||+|||||+||++|+||+||+|||||+|||+|+++++|+||||+||+|+|.+|+++|+|+||||||||||||||
T Consensus 238 L~~l~~Pge~GADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAt 317 (429)
T PF02347_consen 238 LGGLKSPGEYGADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKAT 317 (429)
T ss_dssp CCTC--GGGGT-SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCST
T ss_pred HhCcCChhhcCccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC--HHHHHHHHHHc
Q 001579 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKI 495 (1050)
Q Consensus 418 snict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~i~~~L~~~ 495 (1050)
|||||+|+|+|++|++|+++||++||++++++++.+|+||+++|+++.++.+.+..+|++|.+..+. ..++.+++...
T Consensus 318 SNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~~~~~~l~~~~~~~ 397 (429)
T PF02347_consen 318 SNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKDKEVEELLKRGIEG 397 (429)
T ss_dssp T---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS-HHHHHHHHTT---
T ss_pred hhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCcHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999742554456777888877664 44566666666
Q ss_pred CceeeeecCCeEEEEeccCCCHHHHHHHHHHH
Q 001579 496 EMNLRVVDSNTVTASFDETTTLEDVDKLFIVF 527 (1050)
Q Consensus 496 GI~~~~~~~~~lris~~e~~t~edId~lv~~l 527 (1050)
|++++..+.+++.+|+||++|++|||+|+++|
T Consensus 398 gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 398 GLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp -EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred CCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 77776666779999999999999999999976
No 9
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=100.00 E-value=9.5e-67 Score=594.32 Aligned_cols=402 Identities=35% Similarity=0.524 Sum_probs=293.8
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcccccccc
Q 001579 515 TTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPL 594 (1050)
Q Consensus 515 ~t~edId~lv~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~l 594 (1050)
+|++|++..++.++.+ |+|||+. ++||+++++++++ .+| +.+||.|++||+++|++||.. ..+++++
T Consensus 6 ~t~~~~~~ML~~iG~~-----sieeL~~---~~IP~~i~~~~~~-~lp---~~~sE~e~~r~~~~la~kN~~-~~~fiG~ 72 (429)
T PF02347_consen 6 PTDEDIQEMLDAIGVK-----SIEELFD---SDIPEEIRLKKPL-NLP---EPLSEYELLRHLERLASKNKS-YTSFIGA 72 (429)
T ss_dssp --HHHHHHHHHHCT-S-----STGGGG----TTS-GGG-SS--------------HHHHHHHHHHHHTTS---TTS---C
T ss_pred cCHHHHHHHHHhcCCC-----CHHHHhh---hhCCHhhcCCCCC-CCC---CCCCHHHHHHHHHHHHhcCCC-CCccccc
Confidence 6899999999999987 8999984 5899999998875 554 569999999999999999998 7899999
Q ss_pred cccccCcchhhhhcccccccccc-CCCCCchhhcccHHHHHHHHHHHHHHhhCCCee--eeccCchHHHHHHHHHHHHHH
Q 001579 595 GSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 595 Gs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~--~l~~~sGa~ge~a~Llair~y 671 (1050)
|+|+|++|+.+.+..++|++|++ |||||| |++||++|+++|+|+++|+|||||.+ ++++.+||+|| +++|++|..
T Consensus 73 G~y~~~~P~~i~~~i~~~~ef~TaYtPYQp-EisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aE-a~~ma~r~~ 150 (429)
T PF02347_consen 73 GSYTHYVPAVIDRNILSRPEFYTAYTPYQP-EISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAE-AMLMAVRAT 150 (429)
T ss_dssp TTT-----HHHHH-HHCCHHCCCS-STTSG-GGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHH-HHHHHHHHH
T ss_pred cccCceeChhhcCccccChhhhccCCCCCc-HHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHH-HHHHHHHhc
Confidence 99999999999997799999986 999999 99999999999999999999999975 68899999999 888888753
Q ss_pred HHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCcccccc
Q 001579 672 HKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEE 747 (1050)
Q Consensus 672 ~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~ 747 (1050)
+ .+|++|++|.+.|+.+.+ ++...|++++.++++++|..| + +++++||++|||++|+|+
T Consensus 151 ~-----~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~---~~~a~v~vq~Pn~~G~~e- 213 (429)
T PF02347_consen 151 K-----RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------D---DDTAAVMVQNPNTFGVFE- 213 (429)
T ss_dssp T-----T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------S---TTEEEEEEESS-TTSB---
T ss_pred c-----cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------c---cCeEEEEeecCCCCceEe-
Confidence 2 136789999999998887 466799999999998888877 3 899999999999999999
Q ss_pred CHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccC
Q 001579 748 GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST 827 (1050)
Q Consensus 748 di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~ 827 (1050)
|+++|++++|++|+++|+ ++|+++++++.+||++|+||++++ ||+|++|||||||++|+++|++++++++||+++|.+
T Consensus 214 d~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t 291 (429)
T PF02347_consen 214 DIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQT 291 (429)
T ss_dssp THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEE
T ss_pred eHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceeccc
Confidence 699999999999999999 999999999999999999999765 899999999999999999999999999999999876
Q ss_pred CCC-C------------CC-CCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCee
Q 001579 828 GGI-P------------AP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPIL 893 (1050)
Q Consensus 828 ~~~-~------------~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~ 893 (1050)
.|. + +| +|+|+|+|||++ +++++.+|++|+.++|++||++++++++++|+|++++|++.+.+.
T Consensus 292 ~D~~G~~~~~ltLqtREQHIrReKAtSNIctn---qaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~ 368 (429)
T PF02347_consen 292 KDADGKRAFVLTLQTREQHIRREKATSNICTN---QALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP 368 (429)
T ss_dssp EBCCCSCCEEEE-GGGTCHHHGCCSTT---SS----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC
T ss_pred ccccccceeeeccccccccccccchhhhhhhh---HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 442 1 22 478999999985 888889999999999999999999999999999999999876665
Q ss_pred ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 001579 894 FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 894 ~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~-~~~pv~~~lrI~~te~~t~eeid~fv~aL 965 (1050)
+. +++++++++...+ .....+ |.++++..+. ..++..+.++||+||.+|++|||+|+++|
T Consensus 369 ~~---~~~f~e~v~~~~~-----~~~~~~----l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 369 FD---NPFFFEFVVVFSK-----DKEVEE----LLKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp SS---SSSBSSEEEEESS------HHHHH----HHHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred cC---CCCceeeeeecCC-----cHHHHH----HHHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 54 3567788776541 112223 5555554431 12344679999999999999999999875
No 10
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=1.5e-58 Score=550.29 Aligned_cols=429 Identities=45% Similarity=0.785 Sum_probs=372.8
Q ss_pred ccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcccccccccccccCcchhhhhccccccccccCCCCCchh
Q 001579 546 TAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPAD 625 (1050)
Q Consensus 546 ~~ip~~~~~~~~~l~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e 625 (1050)
++||+++++++++ .+| + +||.|++||+++|+++|...++++|++|+|++++++.+....+++++|.+||||||..
T Consensus 32 ~~ip~~~~~~~~~-~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~ 106 (481)
T PRK04366 32 SLLPEELLRKEPP-ELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEE 106 (481)
T ss_pred ccCCHHHhcCCCC-CCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChh
Confidence 5799999998875 666 3 9999999999999999998778999999999999999998888888999999999944
Q ss_pred hcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEE
Q 001579 626 QAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1050)
Q Consensus 626 ~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv 705 (1050)
.+||.++++.++++++++++|++.+++.+++|+.++..++++++.+...+|+.++++||++...|+.+...+.+.|++++
T Consensus 107 ~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv 186 (481)
T PRK04366 107 TVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVV 186 (481)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEE
Confidence 99999999999999999999999888999999998866556677665566654677899999999999988999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCc
Q 001579 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1050)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaD 785 (1050)
.++++++|.+|+++|+++++ ++|++|++++||++|+++.|+++|+++||++|++++||+||..++.+...|+++|+|
T Consensus 187 ~v~~~~~~~~D~e~L~~~i~---~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD 263 (481)
T PRK04366 187 EIPSNEDGLVDLEALKAAVG---EDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFD 263 (481)
T ss_pred EeecCCCCCcCHHHHHhhcc---cCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCC
Confidence 99998889999999999997 789999999999999884379999999999999999999998876666689999999
Q ss_pred EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCC----CC---C-CCCCCCCCCCcchhhhHHHHHHHH
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI----PA---P-EKSQPLGTIAAAPWGSALILPISY 857 (1050)
Q Consensus 786 v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~----~~---~-~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1050)
++++++||+|+.|+|+||||+|++++++++.+++|+++++..... .+ + +|.+++ .++++.+.++|
T Consensus 264 ~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~-------t~~~l~~~~a~ 336 (481)
T PRK04366 264 VVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAF-------YGNFGVLVRAY 336 (481)
T ss_pred EEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccc-------cCchHHHHHHH
Confidence 999999999999999999999999999999999999877542211 11 1 122222 24667788999
Q ss_pred HHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 001579 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1050)
Q Consensus 858 a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~ 937 (1050)
+|+..+|.+|+++++++++.+++||+++|++++++.+. ++++|+++|++..|. ..|++..+|+++|.++||++++.
T Consensus 337 ~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~~~~~~~---~~~~~~~~~~~~~~~-~~g~~~~~v~~~L~~~Gi~~~~~ 412 (481)
T PRK04366 337 AYIRSLGAEGLREVSEDAVLNANYLKARLKDIYDLPYD---RPCMHEFVLSGKKLK-ETGVRTLDIAKRLLDYGFHPPTI 412 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhCcccCC---CCeeEEEEEECcccc-ccCCCHHHHHHHHHHCCccCCcc
Confidence 99999999999999999999999999999988776653 367789999875442 23568899999999999998877
Q ss_pred CCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCCCCcccccCCC
Q 001579 938 SWP--VPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDT 1001 (1050)
Q Consensus 938 ~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 1001 (1050)
.+| ..+++|+++|+++|++|||+|+++|+++.+++.+ +||.+|+|||+++..+.|+
T Consensus 413 ~~p~~~~~~l~is~~e~~t~edid~l~~~l~~i~~~~~~--------~~~~~~~~p~~~~~~~~~~ 470 (481)
T PRK04366 413 YFPLIVPEALMIEPTETESKETLDAFIAAMKQIAEEAKE--------NPELVKEAPHNTPVRRLDE 470 (481)
T ss_pred ccccccCCeEEEcccCCCCHHHHHHHHHHHHHHHHHHHh--------CcHhHhhCCCCCCCCCccc
Confidence 676 3679999999999999999999999999999888 8999999999999888876
No 11
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=2.4e-55 Score=520.65 Aligned_cols=422 Identities=38% Similarity=0.625 Sum_probs=378.2
Q ss_pred ccCCCCCHHHHHHHHHHhCCCCHHHHhhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCc---cccccCCCC
Q 001579 100 RRHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGY 175 (1050)
Q Consensus 100 ~~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~---~~~~lG~g~ 175 (1050)
++|||++++|+++||+++|++|+|||++ .||+.+ ++.+++|| +++||.++++++.+++++|.. ..+++|.|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~ 77 (447)
T PRK00451 2 MPYIPHTEEDIREMLDAIGVKSIDELFA-DIPEELRLKRPLDLP---PGLSEMELLRHLRELAAKNKTAEEYPSFLGAGA 77 (447)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCHHHHHH-hCCHHHHhCCCCCCC---CCCCHHHHHHHHHHHHhcCCCcCcCcccCcccc
Confidence 6899999999999999999999999995 699999 77888898 567999999999999988854 567999999
Q ss_pred CCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCC
Q 001579 176 YNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKK 255 (1050)
Q Consensus 176 ~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~g 255 (1050)
+++.+|..+. .++.+++|+++|+||+++.++|.++++.|+++++++++|++.+++++++|+|++++++++++... ++
T Consensus 78 ~~~~~p~~~~-~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~--~g 154 (447)
T PRK00451 78 YDHYIPAVVD-HIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRIT--KR 154 (447)
T ss_pred cCCcCcHHHH-HHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhc--CC
Confidence 9999999985 78888899999999999999999999999999999999999999999999999999998887544 78
Q ss_pred CEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch-------hhhc-cCCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCc
Q 001579 256 KTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGV 327 (1050)
Q Consensus 256 d~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~-------~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~ga 327 (1050)
++|++++..||++..+++.+++..|++++.++.+ ++++ ++++|++|++++||.+|.+.|+++|+++||++|+
T Consensus 155 ~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~~~l~~~i~~~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~ 234 (447)
T PRK00451 155 KKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDLEALEAAVDDDTAAVVVQYPNFFGVIEDLEEIAEIAHAGGA 234 (447)
T ss_pred CEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCHHHHHHhcCCCeEEEEEECCCCCCeeCCHHHHHHHHHHCCC
Confidence 9999999999999999988777789999988664 3555 7789999999999999999999999999999999
Q ss_pred EEEEEecCccccCCCCCCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccc
Q 001579 328 KVVMATDLLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 407 (1050)
Q Consensus 328 lliV~a~~~alg~l~~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtr 407 (1050)
+++|+.|..+++.+..++++|+|++++++|+|+.|+.+|||++||+++++++++.+|++++|++.+..++.+|.+.++++
T Consensus 235 ~~iv~~d~~~~g~~~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 314 (447)
T PRK00451 235 LFIVGVDPVSLGLLKPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAR 314 (447)
T ss_pred EEEEEcChHHhccCCCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccc
Confidence 99987777788888788999999999999999999999999999999999999999999999987777888899999999
Q ss_pred cccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC-HH
Q 001579 408 EQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AH 486 (1050)
Q Consensus 408 eq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~ 486 (1050)
++++||+++|+|+|+++++.++.++.++.+++++|++++.+++.+++++++++|++++++++...+++..++++++. ..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~~~~~~ 394 (447)
T PRK00451 315 EQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRLPKPAE 394 (447)
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEecCCCHH
Confidence 99999999999999999888888888888899999999999999999999999999965988755566666676653 78
Q ss_pred HHHHHHHHcCceee----eec---CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 487 AIASAAYKIEMNLR----VVD---SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 487 ~i~~~L~~~GI~~~----~~~---~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
++.++|.++||... ... .+.+|+|+++++|++|||+|+++|.
T Consensus 395 ~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~ 443 (447)
T PRK00451 395 EVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALG 443 (447)
T ss_pred HHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 99999999988632 111 3689999999999999999999985
No 12
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-56 Score=490.10 Aligned_cols=408 Identities=24% Similarity=0.333 Sum_probs=347.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcccccccccc
Q 001579 517 LEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGS 596 (1050)
Q Consensus 517 ~edId~lv~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs 596 (1050)
.+|.+..+++++.+ |+|+|+. ++||++++.+ ..+++..++++||.|+++++++++++|.. ..++|+.|+
T Consensus 16 ~~d~~~ML~~iG~~-----Sld~L~~---~~IP~~Ir~~--~~~~~~~~~~~sE~e~l~~l~~ia~kN~~-~~sfiG~Gy 84 (450)
T COG0403 16 SADQQEMLAAIGVS-----SLDELFS---QDIPPSIRKK--LDTLLPLPKPLSEYEALAELKEIASKNKV-FTSFIGAGY 84 (450)
T ss_pred hHHHHHHHHHcCCC-----CHHHHhh---ccCCHHHHhc--ccccCCCCCCCCHHHHHHHHHHHHhcCch-hhhhccCcc
Confidence 48999999999987 8999984 5899999865 11222346889999999999999999985 368899999
Q ss_pred cccCcchhhhhcccccccccc-CCCCCchhhcccHHHHHHHHHHHHHHhhCCCee--eeccCchHHHHHHHHHHHHHHHH
Q 001579 597 CTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAYHK 673 (1050)
Q Consensus 597 ~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~--~l~~~sGa~ge~a~Llair~y~~ 673 (1050)
|.+++|+.+.+..+++|+|++ |+|||| |++||.+|+++|+|+++|+|||||.+ |+...+++.|| |++|+.|.
T Consensus 85 Y~~~~P~vI~rnile~pewyTaYTPYQp-EISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAE-Am~ma~r~--- 159 (450)
T COG0403 85 YDTYTPPVILRNILENPEWYTAYTPYQP-EISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAE-AMLMAKRV--- 159 (450)
T ss_pred cCCcCcHHHHHHhhcCccccccCCCCch-hhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHH-HHHHHHHh---
Confidence 999999999988899999988 999999 99999999999999999999999964 57777777777 88887664
Q ss_pred hcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCH
Q 001579 674 ARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGI 749 (1050)
Q Consensus 674 ~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di 749 (1050)
++ .++++++++...|...-.. ++..|++|+.++.+ |+++|+++ + ..++.+++++|||++|.+++|+
T Consensus 160 ~k--~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~--~~~~~gv~vQyP~~~G~~~~d~ 229 (450)
T COG0403 160 TK--KKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-D--DGDVFGVLVQYPNTFGIVEEDL 229 (450)
T ss_pred hc--CcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-c--ccCeEEEEEecCCCCCccchhH
Confidence 32 2478899998866433222 45688999999875 88999888 4 2699999999999999666689
Q ss_pred HHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCC
Q 001579 750 DEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGG 829 (1050)
Q Consensus 750 ~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~ 829 (1050)
++|.+.+|++|++++| ++++.+++.+.+||++|+||++++. +.||+|+|||||++|+++|++++++++|||++|.+.|
T Consensus 230 ~~l~~~~h~~~al~~v-~aDplaL~LL~pPGe~GADIvvG~~-QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D 307 (450)
T COG0403 230 RALIEAAHSAGALVIV-AADPLALGLLKPPGEFGADIVVGSA-QRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVD 307 (450)
T ss_pred HHHHHHHhhcCCEEEE-EechhHhhccCCccccCCceEEecC-cccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeec
Confidence 9999999999999998 8999999999999999999999997 8899999999999999999999999999999998765
Q ss_pred C-------------CCC-CCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc---CCe
Q 001579 830 I-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPI 892 (1050)
Q Consensus 830 ~-------------~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~v 892 (1050)
. ++| +|+|+|+|||++ |++++.+|.+|+.++|++|+++++++.+..++|++++|++. +++
T Consensus 308 ~~G~~A~rLaLQTREQHIRReKATSNICTn---QaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~ 384 (450)
T COG0403 308 AAGKRAFRLALQTREQHIRREKATSNICTN---QALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVEL 384 (450)
T ss_pred CCCCchhhhhHHHHHHHHhhhccchhhhHH---HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEe
Confidence 4 222 478999999985 89999999999999999999999999999999999999954 555
Q ss_pred eecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 893 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 893 ~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
.+ ..+|.++.+.+.. .....++++....|+.+.... .+++.|++||.+|++|||.|++++...
T Consensus 385 ~~----~~fFdt~~v~~~~------~~~~~l~~~~~~~G~~L~~~~---~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 385 VF----DHFFDTFTVRVPE------EVAEALLAAAIAGGINLRRVD---ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred cc----ccceeeEEEecch------hHHHHHHHHHHhcCCceeeec---CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 43 2578888887641 235667777778888876554 468999999999999999999998754
No 13
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=2.2e-55 Score=523.30 Aligned_cols=380 Identities=20% Similarity=0.307 Sum_probs=326.3
Q ss_pred hhccCCccc-ccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCc-cccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChh
Q 001579 126 IDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQA 203 (1050)
Q Consensus 126 ~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~-~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~ 203 (1050)
++++||+++ ++++++|| + +||.|+++|+++|+++|.. ..+|+|+|+++.++|+.|.++++++++| ++||||||
T Consensus 30 ~~~~ip~~~~~~~~~~~~---~-~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~~~p~i~~~~~~~~~~-~~~tpYq~ 104 (481)
T PRK04366 30 LESLLPEELLRKEPPELP---E-VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMKYNPKINEKVARLPGF-AELHPLQP 104 (481)
T ss_pred ccccCCHHHhcCCCCCCC---C-CCHHHHHHHHHHHHhcCCCCCcceecCcccCCCCCHHHHHHHHhCcch-hcCCCCCC
Confidence 456799999 88899998 4 9999999999999999997 6799999988888899999999999998 59999999
Q ss_pred H-HhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHH-hh---hhcC--CCCEEEEcCCCChhHHHHHHHhc
Q 001579 204 E-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC-NN---IQKG--KKKTFIIASNCHPQTIDICITRA 276 (1050)
Q Consensus 204 e-isqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la-~~---~~~~--~gd~Vlvs~~~Hps~~~~~~~~a 276 (1050)
| ++||+++.++++|+++++++|++ ++++++++++..+++.++ .+ ..++ ++++||+++..||++..+++
T Consensus 105 e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~--- 179 (481)
T PRK04366 105 EETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAA--- 179 (481)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHH---
Confidence 9 99999999999999999999997 689998888777766543 22 1211 34599999999999998864
Q ss_pred cCCCeEEEEcCc--------hhhhc-cCCCeeEEEEEcCCCCeeE-ccHHHHHHHHHhCCcEEEE-EecCcc-ccCCCCC
Q 001579 277 DGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYPGTEGEV-LDYGDFIKNAHANGVKVVM-ATDLLA-LTILKPP 344 (1050)
Q Consensus 277 ~~~gi~v~~~~~--------~~l~~-l~~~t~~V~v~~pn~~G~i-~di~~I~~~ah~~galliV-~a~~~a-lg~l~~p 344 (1050)
..|++++.++. +++++ ++++|++|++++||++|.+ .|+++|+++||++|++++| ++|+.+ ++.+ +|
T Consensus 180 -~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~-~~ 257 (481)
T PRK04366 180 -MAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKA-RP 257 (481)
T ss_pred -HcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChhhhcccC-Cc
Confidence 46888888765 24555 6789999999999999988 5899999999999999999 677766 3443 78
Q ss_pred CcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccch
Q 001579 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1050)
Q Consensus 345 g~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~ 423 (1050)
+++|||++++++ |+|++|+|+||||+||+++++++.++||++++|+ +|+ +|++++| |+|||||+++|+ +
T Consensus 258 ~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~----~g~-~~~l~~~-r~~~i~r~~a~t----~ 327 (481)
T PRK04366 258 GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEK----DGD-RYRLDYD-RPKSIGRVRAFY----G 327 (481)
T ss_pred cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeec----cCC-ceeeccc-ccccCCCccccc----C
Confidence 999999999999 9999999999999999999999999999999985 355 6999998 999999999985 4
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CCCCccEEEEecC-----C--HHHHHHHHHHc
Q 001579 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCA-----D--AHAIASAAYKI 495 (1050)
Q Consensus 424 ~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~-~~~~~~~v~i~~~-----~--~~~i~~~L~~~ 495 (1050)
|++.++++.+|+.++|++|+++++++++.+++||+++|+++ +++. ..++++++.|..+ + +.++.++|.++
T Consensus 328 ~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~ 405 (481)
T PRK04366 328 NFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDY 405 (481)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHC
Confidence 67888899999999999999999999999999999999986 3333 3355666766542 2 78999999999
Q ss_pred Cceeee-----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 496 EMNLRV-----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 496 GI~~~~-----~~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
||+++. ...+++|+|+++++|++|||+|+++|+.
T Consensus 406 Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l~~ 444 (481)
T PRK04366 406 GFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAMKQ 444 (481)
T ss_pred CccCCccccccccCCeEEEcccCCCCHHHHHHHHHHHHH
Confidence 998752 2357899999999999999999999974
No 14
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=5.9e-54 Score=526.89 Aligned_cols=398 Identities=19% Similarity=0.254 Sum_probs=342.2
Q ss_pred CCHHHHHHHHHHhC-CC--CH--H---HHhhccCCccc-ccCCCCCCCCCCCC-----CHHHHHHHHHHHhcCCCcc-cc
Q 001579 105 ATPEDQAKMSELVG-LD--NL--D---SLIDATVPKSI-RIDSMKFSKFDEGL-----TESQMIEHMQKLASMNKVY-KS 169 (1050)
Q Consensus 105 ~~~~~~~~ml~~~g-~~--~~--~---~l~~~~ip~~~-~~~~~~lp~~~~~~-----sE~e~~~~~~~la~~n~~~-~~ 169 (1050)
.|.+|++..++.++ .+ .+ + +-+...||+++ ++.++.+| ++ ||.|++||+++|++||... .+
T Consensus 413 ~t~~di~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~~~~~----~~f~~~~sE~e~~r~~~~L~~kn~~~~~~ 488 (939)
T TIGR00461 413 TTKADVENLLKVFDGEDNHGLSSQFLSEDVSNSFPREFQRTDEILRN----EVFNMYHSETEMLRYLHRLESKDLALNNS 488 (939)
T ss_pred CCHHHHHHHHHHhcCCCccccchhhhhhhhcccCchhhhccCcccCC----cccccCCCHHHHHHHHHHHHhcCCCcccc
Confidence 58899999999995 32 11 1 11222499999 88877776 56 9999999999999999863 58
Q ss_pred ccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhH-HhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHH-HHHH
Q 001579 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA-MAMC 247 (1050)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~e-isqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA-~~la 247 (1050)
|+|+|.|.|.+|+.+..-...+++|+| ||||||| ++||.||+++|+|+|+|++|||+ |+|+++++++.+|+ .+|+
T Consensus 489 fi~lGsctmk~na~v~~l~~s~~ef~t-~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~~Sl~p~aGA~gE~agL~a 565 (939)
T TIGR00461 489 MIPLGSCTMKLNATAEMMPITWPEFSN-IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--AISLQPNSGAQGEYAGLRV 565 (939)
T ss_pred CCCCccCCCccCHHHHHHHhcchhhcC-cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--CcccCCchHHHHHHHHHHH
Confidence 999999999999999855589999999 9999999 99999999999999999999999 59999999999997 5667
Q ss_pred hhhh---c--CCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cC---CCeeEEEEEcCCCCe
Q 001579 248 NNIQ---K--GKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS---GDVCGVLVQYPGTEG 310 (1050)
Q Consensus 248 ~~~~---~--~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~---~~t~~V~v~~pn~~G 310 (1050)
.|.. + +++++|+++...|.++-+.+ +..|+++++++. ++|++ ++ +++++|++|+||++|
T Consensus 566 iR~y~~~rge~~R~~vlip~saHgtnPasa----~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G 641 (939)
T TIGR00461 566 IRSYHESRGENHRNICLIPVSAHGTNPASA----AMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHG 641 (939)
T ss_pred HHHHHHhcCCCCCCEEEEEccccCcCHHHH----HHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCc
Confidence 6641 1 25678999999996554443 345888888765 45655 54 589999999999999
Q ss_pred eEcc-HHHHHHHHHhCCcEEEE-EecCccccCCCCCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcE
Q 001579 311 EVLD-YGDFIKNAHANGVKVVM-ATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1050)
Q Consensus 311 ~i~d-i~~I~~~ah~~galliV-~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgri 387 (1050)
.++| +++|+++||++|++++| ++|+.++..+.+|+++||||++++. |+|++|+|+||||+|++++++++.++|||+.
T Consensus 642 ~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~ 721 (939)
T TIGR00461 642 VFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHD 721 (939)
T ss_pred eecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCc
Confidence 9987 99999999999999999 7898889989999999999999998 8899999999999999999999999999999
Q ss_pred EeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCE
Q 001579 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1050)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~ 467 (1050)
+|.+.|.+| |||||| ++||+|+.+++.++.+.+|+..+|++||+++++....+|+|++++|++ + +
T Consensus 722 v~~t~d~~g----------req~Ig---a~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~-~-~ 786 (939)
T TIGR00461 722 VVSMITGIG----------GSKSIG---SVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD-H-Y 786 (939)
T ss_pred ccccccCCC----------Cccccc---cccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc-c-C
Confidence 886554322 789997 789999999999999999999999999999999999999999999988 5 7
Q ss_pred EEcCC----CCccEEEEecC-------C-HHHHHHHHHHcCceeeee---cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 468 EVQGL----PFFDTVKVKCA-------D-AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 468 ~l~~~----~~~~~v~i~~~-------~-~~~i~~~L~~~GI~~~~~---~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+++.+ +++++|+++.+ . +.+|+++|.++||....+ ..+++.+++||.+|++|||+|+++|.
T Consensus 787 ~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~ 862 (939)
T TIGR00461 787 PILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMI 862 (939)
T ss_pred cccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHH
Confidence 77632 57899999876 2 789999999999976443 24699999999999999999999996
No 15
>PRK12566 glycine dehydrogenase; Provisional
Probab=100.00 E-value=1e-51 Score=503.33 Aligned_cols=395 Identities=19% Similarity=0.278 Sum_probs=343.1
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcccccccc
Q 001579 515 TTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPL 594 (1050)
Q Consensus 515 ~t~edId~lv~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~l 594 (1050)
-|.+|++..++.|+.+ |+|||+. ++||+++|.++++ .+| +++||.|++++|+++++||..+ .++|+.
T Consensus 20 ~~~~~~~~ML~~iG~~-----s~d~l~~---~~iP~~ir~~~~l-~lp---~~~sE~e~~~~~~~~a~kN~~~-~~fiG~ 86 (954)
T PRK12566 20 PDAAEQQAMLDALGVA-----SRAELIE---QTVPPAIRLNRPL-DLP---AALDEQAALARLRGYAEQNQVW-TSLIGM 86 (954)
T ss_pred CCHHHHHHHHHhcCcc-----CHHHHhh---ccCCHHHhcCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCc-cccccc
Confidence 4789999999999877 8999984 5899999888764 665 7899999999999999999874 589999
Q ss_pred cccccCcchhhhhcccccccccc-CCCCCchhhcccHHHHHHHHHHHHHHhhCCCee--eeccCchHHHHHHHHHHHHHH
Q 001579 595 GSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 595 Gs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~--~l~~~sGa~ge~a~Llair~y 671 (1050)
|++.+.+|+.+....+++++|++ |||||| |++||.+|++.|+|+|+++|||||.+ ++++.++|.|| |++|+.|.
T Consensus 87 G~y~~~~P~vi~~~i~~~~~~yTaYTPYQp-EisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aE-A~~ma~~~- 163 (954)
T PRK12566 87 GYHGTVTPTVILRNVLENPGWYTAYTPYQP-EIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAE-AMALAKRV- 163 (954)
T ss_pred cccCCcCcHHHHHHHHhCchhhhcCCCCCc-hhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHH-HHHHHHHH-
Confidence 99999999999777799999887 999999 99999999999999999999999964 78888889888 88887653
Q ss_pred HHhcCCCCCCEEEEcCCCCCccHHHH-------HhCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccc
Q 001579 672 HKARGDHHRNVCIIPVSAHGTNPATA-------AMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGV 744 (1050)
Q Consensus 672 ~~~~G~~~r~~Vlip~saHgt~pa~a-------~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv 744 (1050)
.++ ++++++|+.+.| |.+. +..|++++. ++++++++ +++++|+++|||++|.
T Consensus 164 --~~~--k~~~~~v~~~~h---P~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~---~~~~~v~vq~P~~~G~ 222 (954)
T PRK12566 164 --AKS--KSNRFFVDEHCH---PQTLSVLRTRAEGFGFELVV-----------DAVDNLAA---HAVFGALLQYPDTHGE 222 (954)
T ss_pred --hhc--CCCEEEECCCCC---HHHHHHHHHhhhcCCcEEEE-----------cchhhcCC---CCEEEEEEECCCCceE
Confidence 221 367899998866 7653 478999875 44555554 6899999999999999
Q ss_pred cccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCcc
Q 001579 745 YEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV 824 (1050)
Q Consensus 745 ~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~v 824 (1050)
++ |+++|.+++|++|+++++ ++++++++.+.+||++|+||++++ +|.|++|+|||||+.|++++++++++++||+++
T Consensus 223 i~-d~~~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~-~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRiv 299 (954)
T PRK12566 223 IR-DLRPLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGS-TQRFGVPMGYGGPHAAYFACRDDYKRAMPGRII 299 (954)
T ss_pred Ec-cHHHHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeC-CCcCCCCCCCCCCCeeeeeehHHHHhhCCCCcc
Confidence 97 899999999999998665 899999999999999999999876 599999999999999999999999999999999
Q ss_pred ccCCCC-------------CCC-CCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-
Q 001579 825 VSTGGI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH- 889 (1050)
Q Consensus 825 g~~~~~-------------~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~- 889 (1050)
|.+.|. ++| .|+|+|+|||++ |++++.+|.+|+.++|++||++++++++.++.|++++|++.
T Consensus 300 G~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~---qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g 376 (954)
T PRK12566 300 GVSRDARGNTALRMALQTREQHIRREKANSNICTA---QVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKG 376 (954)
T ss_pred ceeecCCCCeeeehhhhHHHHHhhhccccchhhHH---HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 987654 222 478999999985 89999999999999999999999999999999999999885
Q ss_pred CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 890 YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 890 ~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
+++.+ .++|++|++++. .+..++.++..+.|+.+.... .+++.|++.|.+|.+|++.+++++.
T Consensus 377 ~~~~~----~~fF~~~~v~~~-------~~~~~~~~~a~~~~~n~r~~~---~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 377 IKRLN----RHFFDTLTLEVG-------GAQAAIIESAEAARINLRILG---RGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred Ccccc----CCccceEEEEcc-------CCHHHHHHHHHHCCCeeEEeC---CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 66653 378999999863 247788999999999987654 4789999999999999999999885
No 16
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=4.2e-50 Score=502.29 Aligned_cols=402 Identities=19% Similarity=0.271 Sum_probs=341.2
Q ss_pred ccCCCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCccccc
Q 001579 512 DETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSM 591 (1050)
Q Consensus 512 ~e~~t~edId~lv~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~ 591 (1050)
+.-+|.+|++..++.|+.+ |+|+|+. +.||+++++++++ .+| +++||.|++|++++|++||..+ .++
T Consensus 14 ~i~~~~~~~~~ml~~~g~~-----s~~~l~~---~~iP~~i~~~~~l-~lp---~~~sE~e~~~~~~~la~~N~~~-~~~ 80 (954)
T PRK05367 14 HIGPSAADQQAMLAALGAD-----SLDALID---QAVPASIRLAEPL-DLP---AALSEAEALAELRAIASKNKVF-RSY 80 (954)
T ss_pred CCCcCHHHHHHHHHhcCCC-----CHHHHhh---hhCCHHHhcCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCC-Ccc
Confidence 3446899999999999977 8999985 4599999988874 665 6899999999999999999874 589
Q ss_pred ccccccccCcchhhhhcccccccccc-CCCCCchhhcccHHHHHHHHHHHHHHhhCCCee--eeccCchHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDSF--SLQPNAGAAGEYAGLMVI 668 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~--~l~~~sGa~ge~a~Llai 668 (1050)
|+.|++.++.|+.+....+++++|++ |||||| |++||.+|++.++|+++++|+|++.+ ++++++++.+| +++++.
T Consensus 81 ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~-EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~e-a~~~a~ 158 (954)
T PRK05367 81 IGQGYYGTHTPPVILRNILENPAWYTAYTPYQP-EISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAE-AMALAK 158 (954)
T ss_pred cCCCCCCCcCcHHHHHHHHhCcchhhccCCCCh-HHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHH-HHHHhh
Confidence 99999999888888777789999876 999999 89999999999999999999999964 78888888887 777765
Q ss_pred HHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccc
Q 001579 669 RAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGV 744 (1050)
Q Consensus 669 r~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv 744 (1050)
+ + .++ ++++||+++..|+.+-.. ++..|++|+.++.+.+. + + ++++++++++||++|.
T Consensus 159 ~-~--~~~--~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d~--~--------~---~~~~~vlvq~p~~~G~ 220 (954)
T PRK05367 159 R-V--SKS--KSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKAL--D--------H---DDVFGVLLQYPGTSGE 220 (954)
T ss_pred h-h--ccC--CCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccCC--C--------c---ccEEEEEEecCCCCee
Confidence 5 2 222 257899999988665532 56799999999975421 1 2 5799999999999999
Q ss_pred cccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCcc
Q 001579 745 YEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV 824 (1050)
Q Consensus 745 ~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~v 824 (1050)
++ |+++|+++||++|++++||+ +.++++.+.+||++|+||+++++|||. +|+|+||||.|++++++++.+++||+++
T Consensus 221 i~-d~~~i~~~ah~~Gal~~vda-~~~Al~~l~~pge~GaDi~vgs~qkfg-~P~g~GGP~aGflavr~~~~r~lpgriv 297 (954)
T PRK05367 221 VR-DYTALIAAAHARGALVAVAA-DLLALTLLTPPGEMGADIAVGSAQRFG-VPMGFGGPHAAYFAVRDAYKRSMPGRIV 297 (954)
T ss_pred ec-cHHHHHHHHHHcCCEEEEEe-hhhhccCCCChhhcCCCEEEeeCcccC-CCCCCCCCCEEEEEECHHHHhhCCCCee
Confidence 98 89999999999999999984 667888889999999999999999866 9999999999999999999999999999
Q ss_pred ccCCCC-------------CCC-CCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-
Q 001579 825 VSTGGI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH- 889 (1050)
Q Consensus 825 g~~~~~-------------~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~- 889 (1050)
|++.+. .++ +++++|+|+|+ ++++.+.++++|+.++|++|++++++++..+++|++++|++.
T Consensus 298 G~s~d~~g~~~~~lalqtReqhiRrekaTsNict---~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G 374 (954)
T PRK05367 298 GVSVDAAGNPALRLALQTREQHIRREKATSNICT---AQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALG 374 (954)
T ss_pred eeecccCCCcccccccccccccccccccccccch---HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 875331 111 46899999997 478888899999999999999999999999999999999874
Q ss_pred CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 890 YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 890 ~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
+++.. ..+++++.+++. .+..+|.++|.++||+++... .+.+||++||.+|++|||+|+++|.
T Consensus 375 ~~~~~----~~~f~~~~~~~~-------~~~~~i~~~l~~~gi~~~~~~---~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 375 LEVVH----DSFFDTLTVEVG-------GDAAAVLARALAAGINLRRVD---DDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred cccCC----CCCCCeEEEeCC-------CCHHHHHHHHHHCCceecccc---CCEEEEEecccCCHHHHHHHHHHHc
Confidence 56542 245677777642 368899999999999986442 5789999999999999999999997
No 17
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=100.00 E-value=3.4e-47 Score=473.29 Aligned_cols=403 Identities=20% Similarity=0.269 Sum_probs=340.4
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcccccccc
Q 001579 515 TTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPL 594 (1050)
Q Consensus 515 ~t~edId~lv~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~l 594 (1050)
+|.+|++..++.++.+ |+|+|+. ++||+++ |..++ .+|.|++++||.|++|+|++|+.+|..+ .++++.
T Consensus 42 ~~~~~~~~ML~~ig~~-----s~d~l~~---~~iP~~i-~~~~l-~lp~~~~~~sE~e~~~~~~~la~kN~~~-~~fiG~ 110 (993)
T PLN02414 42 ATPEEQKAMAEYCGFD-----SLDALID---ATVPKSI-RLDSM-KLSKYDEGLTESQMLEHMKSLASKNKVF-KSYIGM 110 (993)
T ss_pred cCHHHHHHHHHhcCcc-----CHHHHhh---ccCCHHH-hcCCC-CCCCCCCCCCHHHHHHHHHHHHhcCCcc-ccccCC
Confidence 5899999999999977 8999984 5799999 44453 6775668999999999999999999864 478888
Q ss_pred cccccCcchhhhhcccccccccc-CCCCCchhhcccHHHHHHHHHHHHHHhhCCCe--eeeccCchHHHHHHHHHHHHHH
Q 001579 595 GSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 595 Gs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~lael~G~d~--~~l~~~sGa~ge~a~Llair~y 671 (1050)
|.|.+++|+.+....+++++|.+ |||||| |++||.+|.++++|+++|+|+|++. +++++++++.+| +++++.+.
T Consensus 111 G~y~~~~P~~v~~~i~~~~~~~TaytPYqa-EisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaae-a~~~a~~~- 187 (993)
T PLN02414 111 GYYNTHVPPVILRNILENPGWYTQYTPYQA-EIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAE-AMAMCNNI- 187 (993)
T ss_pred CCCCccCCHHHHHHHHhChHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHH-HHHHHHhc-
Confidence 99999999999777789999866 999999 9999999999999999999999996 578888888777 67776542
Q ss_pred HHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCcccccc
Q 001579 672 HKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEE 747 (1050)
Q Consensus 672 ~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~ 747 (1050)
.+| ++++||+++..|+.+-.. ++..|++|+.++.+.. | .. .++++++++++||++|.+.
T Consensus 188 --~~g--~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~---~~~v~~vlvq~P~~~G~v~- 250 (993)
T PLN02414 188 --LKG--KKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YS---SGDVCGVLVQYPATDGEVL- 250 (993)
T ss_pred --ccC--CCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------cc---cCceEEEEEecCCCCeEEc-
Confidence 333 468899999988666433 4568999999987431 1 11 2578899999999999998
Q ss_pred CHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccC
Q 001579 748 GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST 827 (1050)
Q Consensus 748 di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~ 827 (1050)
|+++|+++||++|++++| +||..+++++.+|+++|+||++++.|||. +|+|||||+.|++++++++.+.+||+++|++
T Consensus 251 dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~~r~~PgriVG~s 328 (993)
T PLN02414 251 DYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEYKRLMPGRIIGVS 328 (993)
T ss_pred CHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccc-cCCCCCCCCeeEEEECHHHHhhCCCcccCcc
Confidence 899999999999999999 99999999998899999999999999985 9999999999999999999999999999875
Q ss_pred CCC-------------CCC-CCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCe
Q 001579 828 GGI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPI 892 (1050)
Q Consensus 828 ~~~-------------~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v 892 (1050)
.|. .++ .++++|+|+|++ +++.+.++.+|+.++|++|++++++++..++.|++++|++. +++
T Consensus 329 ~d~~g~~~~~l~LqtReqhiRrEkaTsNict~---qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~ 405 (993)
T PLN02414 329 VDSSGKPALRMAMQTREQHIRRDKATSNICTA---QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQV 405 (993)
T ss_pred cCCCCCcccccccccccchhhhcccccchhHH---HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 432 112 357999999984 77778888899999999999999999999999999999875 555
Q ss_pred eecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 893 LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 893 ~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
.. .+++++++|.+. +..+|.++|.++||.+.... .+.+|+|+|+.+|++|||+|+++|...
T Consensus 406 ~~----~~~f~~vt~~~~--------~~~~v~~~L~~~gI~l~~~~---~~~lrvs~~e~~T~edId~L~~~l~~~ 466 (993)
T PLN02414 406 QS----LPFFDTVKVKCS--------DADAIADAAAKVGINLRVVD---ANTVTVSFDETTTLEDVDKLFKVFAGG 466 (993)
T ss_pred CC----CCCcCeEEEecC--------CHHHHHHHHHHCCCeeEEec---CCeEEEEeeccCCHHHHHHHHHHHccc
Confidence 32 256788888753 34789999999999876443 468999999999999999999999743
No 18
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-41 Score=381.07 Aligned_cols=397 Identities=22% Similarity=0.311 Sum_probs=328.7
Q ss_pred CHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCccccccccc
Q 001579 516 TLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLG 595 (1050)
Q Consensus 516 t~edId~lv~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lG 595 (1050)
++.|..+.++.++.+ ++++|.+ ..+|.+++.++++ .+ +++++|.||++++..+++||.. .+++|+.|
T Consensus 60 ~~~dq~~ml~tlG~~-----dl~~l~~---~~VP~~Ir~~~~l-~~---~~~~~E~eml~~l~~ia~kNk~-~ksfIGmG 126 (1001)
T KOG2040|consen 60 SPTDQQQMLDTLGYK-----DLDELIE---KTVPKSIRLKRPL-KM---DKPLCESEMLQHLEDIASKNKI-WKSFIGMG 126 (1001)
T ss_pred CchHHHHHHHhcChh-----hHHHHHH---hhcchhhcccchh-cC---CCCcCHHHHHHHHHHHHhhhhH-HHHhhccc
Confidence 556777777888765 6777765 5799999998885 55 4789999999999999999985 47899999
Q ss_pred ccccCcchhhhhcccccccccc-CCCCCchhhcccHHHHHHHHHHHHHHhhCCCe--eeeccCchHHHHHHHHHHHHHHH
Q 001579 596 SCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYH 672 (1050)
Q Consensus 596 s~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~lael~G~d~--~~l~~~sGa~ge~a~Llair~y~ 672 (1050)
++...+|+.+.....++++|++ |+|||| |++||.+|.+-.+|.+++++||++. +++...+++.|| |+.++.|.
T Consensus 127 Yyn~~vP~~I~RNilenp~W~TqYTPYQ~-EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaE-Am~l~~~~-- 202 (1001)
T KOG2040|consen 127 YYNTHVPAVILRNILENPGWYTQYTPYQA-EISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAE-AMALCNRI-- 202 (1001)
T ss_pred cccccCcHHHHHHhhhCCcceeccCCCch-hhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHH-HHHHHHhh--
Confidence 9999999999999899999987 999999 9999999999999999999999985 468888888887 77776552
Q ss_pred HhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccC
Q 001579 673 KARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEG 748 (1050)
Q Consensus 673 ~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~d 748 (1050)
.+|+++++....|.-+-.. +..+|++++..+ +++. +...+++++++++||++.|.+. |
T Consensus 203 -----~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~--------~~~~----~~s~~~v~gvlvQYP~t~G~i~-d 264 (1001)
T KOG2040|consen 203 -----NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD--------IKEA----DYSSKDVSGVLVQYPDTEGSVL-D 264 (1001)
T ss_pred -----cccceEEecCCCCcchhhhhhccccccceeEEecC--------HHHh----hccccceeEEEEEcCCCCCccc-C
Confidence 2556788887767544333 334666655433 2222 2223689999999999999998 8
Q ss_pred HHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCC
Q 001579 749 IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG 828 (1050)
Q Consensus 749 i~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~ 828 (1050)
..++.+.+|+.|.++++ +++..++..+.+||+||+||++++. +.|++|+|+|||+.||++|++.+.+.+||+++|.+.
T Consensus 265 ~~el~~~a~~~~s~vv~-atDLLaLtiLrpPgefGaDIavGSs-QRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtk 342 (1001)
T KOG2040|consen 265 FDELVELAHANGSLVVM-ATDLLALTILRPPGEFGADIAVGSS-QRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTK 342 (1001)
T ss_pred HHHHHHHhhccCceEEE-eehhhHHHccCChhhcCceeeeccc-cccCccccCCCchHHHHHHHHHHHhhCCCceEeeee
Confidence 99999999999999888 7888899999999999999999986 899999999999999999999999999999999876
Q ss_pred CC-------------CCC-CCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCee
Q 001579 829 GI-------------PAP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL 893 (1050)
Q Consensus 829 ~~-------------~~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~ 893 (1050)
|. ++| .|+|+|+|||++ |++.+.++.+|..++|++||++++++....+-+|+..|+.. .++.
T Consensus 343 D~~gk~a~RLALQTREQHIrRDKATSNICTA---QALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~ 419 (1001)
T KOG2040|consen 343 DALGKEAYRLALQTREQHIRRDKATSNICTA---QALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQ 419 (1001)
T ss_pred cccccHHHHHHHHHHHHHhhhhccchhhhHH---HHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhc
Confidence 53 122 468999999985 89999999999999999999999999999999999999864 4543
Q ss_pred ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 894 FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 894 ~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
. .++|..+-+.+ +.+.+++.++..+++|...... .+++-++..|..+++|+|.++..+.
T Consensus 420 ~----k~fFDTLkI~~-------~~s~~~~l~rA~~~~iNlr~~e---d~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 420 H----KPFFDTLKIRC-------GCSAEEVLDRAAKRQINLRLVE---DGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred c----ccccceEEEEe-------cCcHHHHHHHHHhhcCceEEee---cCceEEeecccccHHHHHHHHHHHc
Confidence 1 23444444443 3478999999998888776544 5899999999999999999998886
No 19
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-38 Score=349.77 Aligned_cols=390 Identities=20% Similarity=0.301 Sum_probs=304.5
Q ss_pred hCCCCHHHHhhccCCcccccCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcc-ccccCCCCCCCCCcHHHHHHHHhCCCcc
Q 001579 117 VGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASMNKVY-KSFIGMGYYNTHVPPVILRNIMENPAWY 195 (1050)
Q Consensus 117 ~g~~~~~~l~~~~ip~~~~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~~-~~~lG~g~~~~~~p~~i~~~i~~~~~~~ 195 (1050)
.|++..++-.+..+|..++.+.+.+| .+||.|++||+.+|++||... +.++=+|.+-.-+++.+.+.....|+|
T Consensus 18 ~~~~l~~~~~~~~L~~~~~r~~~~~P----e~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p~f- 92 (496)
T COG1003 18 TGYSLPEQVVEEYLPHPVFRRYPPLP----EHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWPEF- 92 (496)
T ss_pred cccccccccchhhcCcHHhhcCCCCc----cccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhcccccccch-
Confidence 34544555555567777733333346 799999999999999999875 346666766666888887778888885
Q ss_pred cccCCChhH-HhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHH-HHhh-hh--c--CCCCEEEEcCCCChhH
Q 001579 196 TQYTPYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA-MCNN-IQ--K--GKKKTFIIASNCHPQT 268 (1050)
Q Consensus 196 t~ytpyq~e-isqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~-la~~-~~--~--~~gd~Vlvs~~~Hps~ 268 (1050)
...+||||| ..||.++.+.++|++++++||||. +||.+.+.+..|-.. |+++ +. + +.++.+||+++.|..+
T Consensus 93 ~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~Da--vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN 170 (496)
T COG1003 93 ANIHPFQPEEQVQGYLELIYELQEWLKEITGMDA--VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN 170 (496)
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHhcCCce--eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence 447999999 899999999999999999999998 899988777777544 3443 22 2 2578999999999655
Q ss_pred HHHHHHhccCCCeEEEEcC--------chhhhc-cCCCeeEEEEEcCCCCeeEc-cHHHHHHHHHhCCcEEEE-EecCcc
Q 001579 269 IDICITRADGFDIKVVVSD--------LKDIDY-KSGDVCGVLVQYPGTEGEVL-DYGDFIKNAHANGVKVVM-ATDLLA 337 (1050)
Q Consensus 269 ~~~~~~~a~~~gi~v~~~~--------~~~l~~-l~~~t~~V~v~~pn~~G~i~-di~~I~~~ah~~galliV-~a~~~a 337 (1050)
=+-. ...|++|++++ +++|++ ++++++++++||||+.|.++ +|.+|++++|++|++|.+ ||++.+
T Consensus 171 PASA----am~G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA 246 (496)
T COG1003 171 PASA----AMAGFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNA 246 (496)
T ss_pred hhhH----hhcCceEEEEecCCCCCccHHHHHHHhccceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhh
Confidence 5442 23588888874 357776 78999999999999999997 899999999999999999 899999
Q ss_pred ccCCCCCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEeccccccccccccc
Q 001579 338 LTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 416 (1050)
Q Consensus 338 lg~l~~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irReka 416 (1050)
+..+..||++|+||+..+. |+|.+|+|.||||+|-+.+++.+..+||++. .. .+ +.. |++....+ ..+-|-
T Consensus 247 ~vG~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~-~~-~~--~~~-y~~~~~~~-~s~g~~-- 318 (496)
T COG1003 247 IVGLARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPV-VY-HD--VGE-YRLDYDGK-KSIGVS-- 318 (496)
T ss_pred hhccccccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCc-cc-CC--Ccc-ccccCCCC-ccceee--
Confidence 8888899999999999999 9999999999999999999999999999865 21 11 111 33221111 122221
Q ss_pred CCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CC--CCccEEEEecC------C--H
Q 001579 417 TSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL--PFFDTVKVKCA------D--A 485 (1050)
Q Consensus 417 Tsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~-~~--~~~~~v~i~~~------~--~ 485 (1050)
.+++.+++ .-..+-+|+..+|++||++..+...-+|+|++++|+.. ++++ .. ..-++++++.. + +
T Consensus 319 ~a~~Gs~~--il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~ 394 (496)
T COG1003 319 AAPYGSAS--ILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRA 394 (496)
T ss_pred ccccCcch--HHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcH
Confidence 22333333 33567789999999999999999999999999999873 6764 22 24578888765 3 8
Q ss_pred HHHHHHHHHcCceeee-----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 486 HAIASAAYKIEMNLRV-----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 486 ~~i~~~L~~~GI~~~~-----~~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
.+|+++|.+.|+.... +..++++|.+||+.++++||+|+++|..
T Consensus 395 ~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~ 443 (496)
T COG1003 395 LDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIA 443 (496)
T ss_pred HHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHH
Confidence 8999999999997543 3579999999999999999999999963
No 20
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=100.00 E-value=2.7e-37 Score=366.53 Aligned_cols=412 Identities=25% Similarity=0.375 Sum_probs=314.7
Q ss_pred CCHHHHHHHHHHHhCCCCCCCCHHhhhhhhhccCCCCccCCCCCCCCcccCCCCCHHHHHHHHHHHhccccCcccccccc
Q 001579 515 TTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPL 594 (1050)
Q Consensus 515 ~t~edId~lv~~l~~~~~~~~~~~~l~~~~~~~ip~~~~~~~~~l~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~l 594 (1050)
|+++|++.+++.|+.. |+|||+ ++||+.++++.+. .+| ++.||.++++++.+++.+|.......+++
T Consensus 7 ~~~~~~~~~~~~~~~~-----~~~~~~----~~~p~~~~~~~~~-~lp---~~~~~~~v~~~~~~~~~~~~~~~~~~~~l 73 (447)
T PRK00451 7 HTEEDIREMLDAIGVK-----SIDELF----ADIPEELRLKRPL-DLP---PGLSEMELLRHLRELAAKNKTAEEYPSFL 73 (447)
T ss_pred CCHHHHHHHHHHhCCC-----CHHHHH----HhCCHHHHhCCCC-CCC---CCCCHHHHHHHHHHHHhcCCCcCcCcccC
Confidence 6899999999999876 799997 4899999988875 665 45799999999999998886554456677
Q ss_pred cccc--cCcchhhhhccccccccc-cCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeecc-CchHHHHHHHHHHHHH
Q 001579 595 GSCT--MKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 595 Gs~t--~~~~~~~~~~~~~~~~f~-~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~-~sGa~ge~a~Llair~ 670 (1050)
|.+. ...+...... ...+++. .|+|+++ +.++|.++.+.|+++++++++|++..++.. ++|+++.++++++++.
T Consensus 74 g~g~~~~~~p~~~~~~-~~~~~~~~~y~~~~~-~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~ 151 (447)
T PRK00451 74 GAGAYDHYIPAVVDHI-ISRSEFYTAYTPYQP-EISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMAVRI 151 (447)
T ss_pred cccccCCcCcHHHHHH-HhchhHHHhcCCCCC-ccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHh
Confidence 7533 3344444332 3444554 5999999 889999999999999999999998655433 3444444455544431
Q ss_pred HHHhcCCCCCCEEEEcCCCCCccHHHHH----hCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccc
Q 001579 671 YHKARGDHHRNVCIIPVSAHGTNPATAA----MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE 746 (1050)
Q Consensus 671 y~~~~G~~~r~~Vlip~saHgt~pa~a~----~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~ 746 (1050)
.++++||+++..|+++...+. ..|++++.++++++ .+|+++|+++++ ++|++|++++||.+|.++
T Consensus 152 -------~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~---~~t~~v~l~~pn~tG~v~ 220 (447)
T PRK00451 152 -------TKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD---DDTAAVVVQYPNFFGVIE 220 (447)
T ss_pred -------cCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC---CCeEEEEEECCCCCCeeC
Confidence 145789999999988776644 47999999999887 999999999997 789999999999999998
Q ss_pred cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCcccc
Q 001579 747 EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS 826 (1050)
Q Consensus 747 ~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~ 826 (1050)
|+++|+++||++|++++++ .+..+++.+..|+++|+|+++++.|| |++|+.+||||+|++++++++.+.+|+..+|+
T Consensus 221 -~l~~I~~~a~~~~~~~iv~-~d~~~~g~~~~~~~~~~D~~~~s~~k-~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~ 297 (447)
T PRK00451 221 -DLEEIAEIAHAGGALFIVG-VDPVSLGLLKPPGEYGADIVVGEGQP-LGIPLSFGGPYLGFFATRKKLVRQMPGRLVGE 297 (447)
T ss_pred -CHHHHHHHHHHCCCEEEEE-cChHHhccCCCcccCCCCEEEECCCc-CCCCCCCCCCCchHHHhhHHHHhhCCCCEeee
Confidence 7999999999999999983 23345565667899999999999876 88999999999999999999988888776665
Q ss_pred CCCC-CC-------------CCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--C
Q 001579 827 TGGI-PA-------------PEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--Y 890 (1050)
Q Consensus 827 ~~~~-~~-------------~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~ 890 (1050)
+.+. .+ ..+.+.+.++++. +.....++++++.+++++|++++.++...+++++.++|+++ +
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~ 374 (447)
T PRK00451 298 TVDADGKRGFVLTLQAREQHIRREKATSNICTN---QALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGV 374 (447)
T ss_pred ecccCCCeeeEeecccccccccccccccccccc---HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCE
Confidence 3211 00 1123445555542 22233456667888999999999999999999999999876 3
Q ss_pred CeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC---CCC-CCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 891 PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM---SWP-VPGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 891 ~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~---~~p-v~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
++ +. +.+++.+++++. .+..+++++|.++|+.+... .+| ..+.+|+++++.+|++|||+|+++|+
T Consensus 375 ~~-~~---~~~~~~~~v~~~-------~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~ 443 (447)
T PRK00451 375 EL-FD---GPFFNEFVVRLP-------KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALG 443 (447)
T ss_pred Ee-cC---CCeEEEEEEecC-------CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 33 22 344555556652 35689999999999885321 122 34789999999999999999999998
Q ss_pred HHH
Q 001579 967 SIR 969 (1050)
Q Consensus 967 ~i~ 969 (1050)
+++
T Consensus 444 ~~~ 446 (447)
T PRK00451 444 EVL 446 (447)
T ss_pred HHh
Confidence 764
No 21
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=1.3e-35 Score=346.44 Aligned_cols=375 Identities=45% Similarity=0.654 Sum_probs=303.9
Q ss_pred HHHHHHHHHHHhcCCCccc---cccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCC
Q 001579 150 ESQMIEHMQKLASMNKVYK---SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1050)
Q Consensus 150 E~e~~~~~~~la~~n~~~~---~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~ 226 (1050)
|.|+++|+++++++|.... ..+|.|..+|-.|.++.+...+. ...+.|+||.+..++|..+...++++.+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC
Confidence 5699999999999887542 57888888888999987444444 4568899999999999999999999999999999
Q ss_pred CCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cCCC
Q 001579 227 PMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGD 297 (1050)
Q Consensus 227 ~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~~ 297 (1050)
+..++.++.+++.++++++++.....+++|+|++++..|+++...+....+..|++++.++. +++++ ++++
T Consensus 80 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 159 (398)
T cd00613 80 DVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEE 159 (398)
T ss_pred CccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCC
Confidence 87777788877766676655443332248999999999999999987665566788887754 34555 7788
Q ss_pred eeEEEEEcCCCCeeEccH-HHHHHHHHhCCcEEEEEecCccc-cCCCCCCcccceEEEecC-ccccccCCCCCcceEEEE
Q 001579 298 VCGVLVQYPGTEGEVLDY-GDFIKNAHANGVKVVMATDLLAL-TILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLA 374 (1050)
Q Consensus 298 t~~V~v~~pn~~G~i~di-~~I~~~ah~~galliV~a~~~al-g~l~~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la 374 (1050)
|++|++++|+.+|.+.|+ ++|+++||++|++++|+. .++. .....++++|+|++++++ |++ .|++.|||++||++
T Consensus 160 t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~-~~~~~~~~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~ 237 (398)
T cd00613 160 VAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDG-DNLNLTGLKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFA 237 (398)
T ss_pred eEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEe-ccccccCCCChHHcCCCEEEeeccccC-CCCCCCCCceeEEE
Confidence 999999999989999985 999999999999999954 2222 234457889999999999 666 99999999999999
Q ss_pred EehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 001579 375 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 454 (1050)
Q Consensus 375 ~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a 454 (1050)
+++++.+.+++..+|+..+..+.+.|.+.+..++.|.|||++|+|+++..++.+..++..+.+++.+|++++.+++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~ 317 (398)
T cd00613 238 VKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNA 317 (398)
T ss_pred EhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 99999999999988875443344557777777788999999999999988887777777778889999999999999999
Q ss_pred HHHHHHHhcCCCEEEcCCCCccEEEEecC---C--HHHHHHHHHHcCceeeee---cCCeEEEEeccCCCHHHHHHHHHH
Q 001579 455 GTFALGLKKLGTVEVQGLPFFDTVKVKCA---D--AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIV 526 (1050)
Q Consensus 455 ~~l~~~L~~~G~~~l~~~~~~~~v~i~~~---~--~~~i~~~L~~~GI~~~~~---~~~~lris~~e~~t~edId~lv~~ 526 (1050)
++++++|+++++..+...+++..+.+.++ + +.++.++|.++||.+... .++.||+|++.+||++|||+++++
T Consensus 318 ~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~ 397 (398)
T cd00613 318 NYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIEPTETETKEELDALLEA 397 (398)
T ss_pred HHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhhcCccccccccCCCCeEEEEcCCCCCHHHHHHHHHh
Confidence 99999999987333223344455666665 3 678999999999987653 457899999999999999999987
Q ss_pred H
Q 001579 527 F 527 (1050)
Q Consensus 527 l 527 (1050)
|
T Consensus 398 L 398 (398)
T cd00613 398 L 398 (398)
T ss_pred C
Confidence 5
No 22
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=100.00 E-value=3.2e-34 Score=334.79 Aligned_cols=375 Identities=44% Similarity=0.659 Sum_probs=282.1
Q ss_pred HHHHHHHHHHHhccccCcccccccccccccCcchhhhhcc--ccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCC
Q 001579 570 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMP--VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF 647 (1050)
Q Consensus 570 E~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~--~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~ 647 (1050)
|+||+||+++++++|...+.+++.+|.|.+.++....... .....+..|+||.+ ..+.|..++..++++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~la~~~g~ 79 (398)
T cd00613 1 ETEVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQP-EISQGRLQALFELQTMLCELTGM 79 (398)
T ss_pred CHHHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccccCcccCCCCCh-hhhhhHHHHHHHHHHHHHHHHCC
Confidence 6799999999999999888888889888777765533222 11112334667765 66789999999999999999998
Q ss_pred C--eeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCC----CEEEEEcCCCCCCCCHHHHH
Q 001579 648 D--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG----MKIVSVGTDAKGNINIEELR 721 (1050)
Q Consensus 648 d--~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G----~~vv~V~~d~~g~iD~e~L~ 721 (1050)
+ .+.+.+++|++++ +++++++. .++ ++++|+++++.|+++.......| ++++.+++++++.+|+++|+
T Consensus 80 ~~~~v~~~~~g~~~~~-~~~~~~~~---~~~--~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~ 153 (398)
T cd00613 80 DVANASLQDEATAAAE-AAGLAAIR---AYH--KRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALK 153 (398)
T ss_pred CccceeccCchHHHHH-HHHHHHHh---ccc--CCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHH
Confidence 7 4556655565555 33333331 221 46889999999999988877766 99999999777889999999
Q ss_pred HHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCC
Q 001579 722 KAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGG 801 (1050)
Q Consensus 722 ~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~ 801 (1050)
++++ ++|++|++++|+++|.+.+.+++|+++|+++|+++++|+++..+. +..+++.+++|++++++||++ +|+|+
T Consensus 154 ~~i~---~~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~-~~~~~~~~~~d~~~~s~~K~~-~p~g~ 228 (398)
T cd00613 154 EEVS---EEVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLT-GLKPPGEYGADIVVGNLQKTG-VPHGG 228 (398)
T ss_pred HhcC---CCeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEecccccc-CCCChHHcCCCEEEeeccccC-CCCCC
Confidence 9996 789999999999889987335999999999999999999875433 556788899999999999999 99999
Q ss_pred CCCcceeeeecccccCCCCCCccccCCCC---------CC----C-CCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 802 GGPGMGPIGVKKHLAPFLPSHPVVSTGGI---------PA----P-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 802 GGPg~G~i~v~~~l~~~lpg~~vg~~~~~---------~~----~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
|||++|++++++++.+.+++...++..+. .. + .+++++.++.+ +....+..+|+++..++.+|
T Consensus 229 Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~---~~~~~~~~a~~~l~~~~~~g 305 (398)
T cd00613 229 GGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICT---GQALLALMAAMYIVYLGPEG 305 (398)
T ss_pred CCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhccccccccccee---cHHHHHHHHHHHHHHhCHHH
Confidence 99999999999888877765443322100 00 0 11233444432 45566677888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEE
Q 001579 868 LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lr 946 (1050)
+.++.++..++++|+.++|+++ ..... .++..+.+.++++.. .+.+..+++++|.++||++.....+..+.||
T Consensus 306 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~~~~~~v~~~~~~~---~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lR 379 (398)
T cd00613 306 LKEIAERAHLNANYLAKRLKEVGGVLPF---NGPFFHEFVLRLPPL---YGIRAEDLAKALIDGGFHAPTMYLPVDGTLM 379 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccC---CCCeeEEEEEEcCCc---chHHHHHHHHhhhhcCccccccccCCCCeEE
Confidence 9999999999999999999885 22211 133445556665410 1245688999999999997654322358899
Q ss_pred EEcCCCCCHHHHHHHHHHH
Q 001579 947 IEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 947 I~~te~~t~eeid~fv~aL 965 (1050)
++|+.++|++|||+|+++|
T Consensus 380 is~~~~~t~edid~~~~~L 398 (398)
T cd00613 380 IEPTETETKEELDALLEAL 398 (398)
T ss_pred EEcCCCCCHHHHHHHHHhC
Confidence 9999999999999999875
No 23
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-31 Score=308.64 Aligned_cols=360 Identities=19% Similarity=0.167 Sum_probs=274.6
Q ss_pred HHHHHHHHHHhcC---CCccccccCCCCCCCCCcHHHHHHHHhCC-CcccccCCChhHHhhhHHHHHHHHHHHHHHhcCC
Q 001579 151 SQMIEHMQKLASM---NKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1050)
Q Consensus 151 ~e~~~~~~~la~~---n~~~~~~lG~g~~~~~~p~~i~~~i~~~~-~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~ 226 (1050)
..+++.+..+.+. +.+|.+.-+.+ ..|..+.+.+.+-. .|+...+......++...+.+.+.|+.+++|+|+
T Consensus 6 ~~~r~~fp~l~~~~~~~~vylD~aa~~----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a 81 (405)
T COG0520 6 AAVRADFPALKREVGKPLVYLDNAATS----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNA 81 (405)
T ss_pred HHHHhhCHHHhhccCCCeEEecCcccc----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 3466777777554 23444433333 37777765565411 1222223334457777888999999999999999
Q ss_pred CC-cceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch--------hhhc-cCC
Q 001579 227 PM-SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSG 296 (1050)
Q Consensus 227 ~~-anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~-l~~ 296 (1050)
++ .++.++.++|.++..+..++.....+||+||+++.+|++++.+|+.+++..|+++++++++ +++. +++
T Consensus 82 ~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~ 161 (405)
T COG0520 82 DSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITP 161 (405)
T ss_pred CCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCC
Confidence 95 8899999999776665554431123789999999999999999999998889999999752 3455 788
Q ss_pred CeeEEEEEc-CCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecC-ccccccCCCCCcceEEE
Q 001579 297 DVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFL 373 (1050)
Q Consensus 297 ~t~~V~v~~-pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~l 373 (1050)
+|++|.+++ +|.+|++.|+++|+++||++|++++|++ .++.+.++ +..++|+|++++|+ |+|++|. |.|+|
T Consensus 162 ~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDa-aq~~~h~~idv~~l~~Df~afsgHKwl~gP~-----GiGvL 235 (405)
T COG0520 162 KTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDA-AQAAGHLPIDVQELGCDFLAFSGHKWLLGPT-----GIGVL 235 (405)
T ss_pred CceEEEEECccccccccchHHHHHHHHHHcCCEEEEEC-ccccCccCCCchhcCCCEEEEcccccccCCC-----ceEEE
Confidence 999999987 6999999999999999999999999943 23555443 56789999999999 5576553 58899
Q ss_pred EEehhhhhcCCCcEEeEe-ecCCCC-cceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHH
Q 001579 374 ATSQEYKRMMPGRIVGVS-IDSSGK-PALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVH 451 (1050)
Q Consensus 374 a~~~~~~r~lpgrivG~s-~d~~g~-~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~ 451 (1050)
++|+++++.|+|...|+. .+.... ..+ +..+...|.|.||+||+ +.+++.+++ .|+...|+++|.++.+
T Consensus 236 y~r~~~l~~l~P~~~gg~~~~~~~~~~~~----~~~~~p~rfe~gTpn~~---~~i~l~aAl--~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 236 YVRKELLEELEPFLGGGGMIEYVSRDEGV----TLAELPLRFEAGTPNIA---GAIGLAAAL--DYLLEIGMEAIEAHER 306 (405)
T ss_pred EEchHHHhhcCCcccCCCceeeecccccc----cccCcchhhccCCchHH---HHHhHHHHH--HHHHHHhHHHHHHHHH
Confidence 999999999988888752 221111 111 12355678899999994 555666666 7777889999999999
Q ss_pred HHHHHHHHHHhcCCCEEEcCCC---CccEEEEecCC--HHHHHHHHHHcCceeeeec------------CCeEEEEeccC
Q 001579 452 GLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------------SNTVTASFDET 514 (1050)
Q Consensus 452 ~~a~~l~~~L~~~G~~~l~~~~---~~~~v~i~~~~--~~~i~~~L~~~GI~~~~~~------------~~~lris~~e~ 514 (1050)
++++++.++|+++.++++++.+ ....++|++++ +.+++..|.++||.++.-. .+++|+|++.|
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~Y 386 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLY 386 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeec
Confidence 9999999999999669998643 45678888887 8999999999999886521 34599999999
Q ss_pred CCHHHHHHHHHHHhC
Q 001579 515 TTLEDVDKLFIVFAG 529 (1050)
Q Consensus 515 ~t~edId~lv~~l~~ 529 (1050)
||+||||+|+++|+.
T Consensus 387 Nt~edid~l~~aL~~ 401 (405)
T COG0520 387 NTEEDVDRLLEALKK 401 (405)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999999963
No 24
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=2.8e-26 Score=265.21 Aligned_cols=359 Identities=19% Similarity=0.256 Sum_probs=243.9
Q ss_pred CCCHHHHHHHHHHHhccccCcccccccccc-cccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhh
Q 001579 567 YHTEHELLRYIHLLQSKELSLCHSMIPLGS-CTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT 645 (1050)
Q Consensus 567 ~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs-~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~ 645 (1050)
+++|+||+++|+++.++|+++.+ | ||+ ||+..+...+.+. ++...++..+ ...+|..+++.++++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~a~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~ 72 (371)
T PRK13520 1 GLSEEEILEELEEYRSEDLKYER--I-LSSMCTEPHPIARKAHE----MFLETNLGDP-GLFPGTAKLEEEAVEMLGELL 72 (371)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHH--e-eeeeecCchHHHHHHHH----HHHhcCCCCc-ccCccHHHHHHHHHHHHHHHh
Confidence 47999999999999999999874 4 887 7776655444332 1111111111 113467788899999999999
Q ss_pred CCCee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCCCCHHHHHHHH
Q 001579 646 GFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAA 724 (1050)
Q Consensus 646 G~d~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i 724 (1050)
|++.. .+..++|+++...+ ++.++.. +..++++||+++..|.+....++..|++++.|+.++++.+|+++|++++
T Consensus 73 g~~~~~~~~~~ggt~a~~~a---~~~~~~~-~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i 148 (371)
T PRK13520 73 HLPDAYGYITSGGTEANIQA---VRAARNL-AKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLI 148 (371)
T ss_pred CCCCCCeEEecCcHHHHHHH---HHHHHhh-ccCCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHH
Confidence 98753 34456666555443 3333221 1124578999988887766667889999999999888999999999999
Q ss_pred HcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCC--C----CcccCcEEEeCCcccccc
Q 001579 725 EANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS--P----GYIGADVCHLNLHKTFCI 797 (1050)
Q Consensus 725 ~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~--p----g~~GaDv~~~~~hKtf~~ 797 (1050)
+ +++++|+++.+ |.+|.+. |+++|+++||++|++++||+++......+.. + ...|+|.+.++.||+...
T Consensus 149 ~---~~~~~vi~~~~~~~tG~~~-~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a 224 (371)
T PRK13520 149 D---DNTIGIVGIAGTTELGQVD-PIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA 224 (371)
T ss_pred h---hCCEEEEEEcCCcCCcccC-CHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCc
Confidence 7 67877777776 4689998 7999999999999999999986422211111 1 135789999999997542
Q ss_pred CCCCCCCcceeeee-cccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHH
Q 001579 798 PHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1050)
Q Consensus 798 P~g~GGPg~G~i~v-~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1050)
| .+.|.+++ ++++...+....-.... +......+. +.+ ..+..+++.+..++.+|+++..++..
T Consensus 225 ~-----~~~G~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~gt---~~~--~~~~~~~~al~~l~~~g~~~~~~~~~ 289 (371)
T PRK13520 225 P-----IPAGGILFRDESYLDALAVDTPYLTS-----KKQATLTGT---RSG--AGVAATYAVMKYLGREGYRKVVERCM 289 (371)
T ss_pred c-----CCceEEEEcCHHHHHhhcccCccccC-----CCCcceEee---ccC--hHHHHHHHHHhhhcHhHHHHHHHHHH
Confidence 2 23444554 44454443210000000 000000111 111 22455778888889999998889999
Q ss_pred HHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCH
Q 001579 877 LNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK 955 (1050)
Q Consensus 877 ~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~ 955 (1050)
.+++++.++|+++ +++.+. +..+.+.+++. +.+++.++|.++||.+..... ++.+||+++..+|+
T Consensus 290 ~~~~~l~~~L~~~g~~~~~~----~~~~~v~~~~~--------~~~~v~~~L~~~gi~v~~~~~--~~~iRis~~~~~t~ 355 (371)
T PRK13520 290 ENTRWLAEELKERGFEPVIE----PVLNIVAFDDP--------NPDEVREKLRERGWRVSVTRC--PEALRIVCMPHVTR 355 (371)
T ss_pred HHHHHHHHHHHhCCCEEecC----CCceEEEEecC--------CHHHHHHHHHHCCceeccCCC--CCEEEEEEECCCCH
Confidence 9999999999875 443321 22333445432 467999999999998765432 46899999989999
Q ss_pred HHHHHHHHHHHHHHH
Q 001579 956 EELDRYCDALISIRE 970 (1050)
Q Consensus 956 eeid~fv~aL~~i~~ 970 (1050)
+|||+|+++|++++.
T Consensus 356 edi~~~~~~l~~~~~ 370 (371)
T PRK13520 356 EHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998753
No 25
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=8.2e-26 Score=265.06 Aligned_cols=358 Identities=16% Similarity=0.107 Sum_probs=255.2
Q ss_pred HHHHHHHHHHhcC----CCccccccCCCCCCCCCcHHHHHHHHhCCCccccc--CCC--hhHHhhhHHHHHHHHHHHHHH
Q 001579 151 SQMIEHMQKLASM----NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQY--TPY--QAEIAQGRLESLLNFQTMIAD 222 (1050)
Q Consensus 151 ~e~~~~~~~la~~----n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~y--tpy--q~eisqG~le~l~e~q~~ia~ 222 (1050)
..++.++.-+... ...|.++-+.+. .|..+.+.+.+ |+..+ .|. ....++-..+.+.++++.+|+
T Consensus 6 ~~~r~~fp~~~~~~~~~~~iYld~a~~~~----~~~~v~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~ 78 (406)
T PRK09295 6 EKVRADFPVLSREVNGLPLAYLDSAASAQ----KPSQVIDAEAE---FYRHGYAAVHRGIHTLSAQATEKMENVRKQAAL 78 (406)
T ss_pred HHHHhhCccccCcCCCCceEEEeCccccc----CCHHHHHHHHH---HHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 3455555554321 235667667664 44444434332 22211 121 112344566778899999999
Q ss_pred hcCC-CCcceeEecchHHHHHHHHHHhhh-hcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhh
Q 001579 223 LTGL-PMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDID 292 (1050)
Q Consensus 223 L~G~-~~anasl~d~~Taa~eA~~la~~~-~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~ 292 (1050)
++|. ++.++.++.|+|.++..++.++.. ..++||+||+++.+||++...++..++..|++++.++. ++++
T Consensus 79 ~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~ 158 (406)
T PRK09295 79 FINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLP 158 (406)
T ss_pred HcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHH
Confidence 9998 567898999999777765544321 11378999999999999998888777778999888753 3555
Q ss_pred c-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecCccccccCCCCCcc
Q 001579 293 Y-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPH 369 (1050)
Q Consensus 293 ~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~k~~g~P~~~GGP~ 369 (1050)
+ ++++|++|++++| |.+|.+.|+++|+++||++|++++|++ ..+++... +..++|+|++++|++++.+| +|
T Consensus 159 ~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~K~~gp-----~G 232 (406)
T PRK09295 159 ALFDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDG-AQAVMHHPVDVQALDCDFYVFSGHKLYGP-----TG 232 (406)
T ss_pred HhcCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEc-ccccCccccCchhcCCCEEEeehhhccCC-----CC
Confidence 5 6788999999987 789999999999999999999999943 34555432 33578999999999556434 35
Q ss_pred eEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHH
Q 001579 370 AAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR 449 (1050)
Q Consensus 370 ~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~ 449 (1050)
.|++++++++.+.+|+...|.+......... ..+.++...|+|.||.|+ .+.+++.+++ .++...|++++.++
T Consensus 233 ~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~r~e~GT~~~---~~~~~l~~al--~~~~~~g~~~i~~~ 305 (406)
T PRK09295 233 IGILYVKEALLQEMPPWEGGGSMIATVSLTE--GTTWAKAPWRFEAGTPNT---GGIIGLGAAL--DYVSALGLNNIAEY 305 (406)
T ss_pred cEEEEEchHhHhhCCCcccCCceeeeeecCC--ccccCCchhhcCCCCccH---HHHHHHHHHH--HHHHHhCHHHHHHH
Confidence 7999999999888887665543210000000 011123455789999998 4566666665 56666799999999
Q ss_pred HHHHHHHHHHHHhcCCCEEEcCC-CCccEEEEecCC--HHHHHHHHHHcCceeeee------------cCCeEEEEeccC
Q 001579 450 VHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDET 514 (1050)
Q Consensus 450 ~~~~a~~l~~~L~~~G~~~l~~~-~~~~~v~i~~~~--~~~i~~~L~~~GI~~~~~------------~~~~lris~~e~ 514 (1050)
+.+++++++++|+++++++++++ .....++|.+++ +.++.+.|.++||.++.- .++.+|+|++.+
T Consensus 306 ~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~y 385 (406)
T PRK09295 306 EQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMY 385 (406)
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCEEEEEccCC
Confidence 99999999999999844988753 233467777765 788999999999988531 135799999999
Q ss_pred CCHHHHHHHHHHHh
Q 001579 515 TTLEDVDKLFIVFA 528 (1050)
Q Consensus 515 ~t~edId~lv~~l~ 528 (1050)
||++|||+|+++|+
T Consensus 386 nt~~did~l~~~l~ 399 (406)
T PRK09295 386 NTHEEVDRLVAGLQ 399 (406)
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999999996
No 26
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=9.8e-26 Score=261.66 Aligned_cols=315 Identities=19% Similarity=0.225 Sum_probs=227.8
Q ss_pred cccHHHHHHHHHHHHHHhhCCCe-eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCC
Q 001579 627 AQGYQEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCG 701 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~d~-~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G 701 (1050)
.+-..+.+++.++.+++++|.+. .++..+.|++ ++..+..+.|... ..++|+||++...|.+|... ++..|
T Consensus 61 ~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT--~aln~va~~l~~~--~~~gdeIv~s~~EH~sn~~pw~~~~~~~G 136 (405)
T COG0520 61 AEEATDLYEAAREAVARFLNADSSDEIVFTRGTT--EALNLVARGLGRS--LKPGDEIVVSDLEHHSNIVPWQELAKRTG 136 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChh--HHHHHHHHHhhhh--hcCCCEEEEccCcchhhHHHHHHHHHhcC
Confidence 34455788999999999999884 4433333332 1333444444211 13568999999999888665 45579
Q ss_pred CEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCC
Q 001579 702 MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1050)
Q Consensus 702 ~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg 780 (1050)
++|+++|.+++|.+|+++++++++ ++|++|.++.. |.+|++. |+++|+++||++|++++||++|..+... ....
T Consensus 137 a~v~~i~~~~~g~~~~~~~~~~i~---~~Tklvais~vSn~tG~~~-pv~~I~~la~~~ga~v~VDaaq~~~h~~-idv~ 211 (405)
T COG0520 137 AKVRVIPLDDDGLLDLDALEKLIT---PKTKLVALSHVSNVTGTVN-PVKEIAELAHEHGALVLVDAAQAAGHLP-IDVQ 211 (405)
T ss_pred cEEEEEecCCCCCcCHHHHHHhcC---CCceEEEEECccccccccc-hHHHHHHHHHHcCCEEEEECccccCccC-CCch
Confidence 999999999889999999999887 89999999997 5799998 7999999999999999999998655433 2456
Q ss_pred cccCcEEEeCCccccccCCCCCCC-cceeeeecccccCCCCCCccccCC----C--C------CCCCCCCCCCCCCcchh
Q 001579 781 YIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTG----G--I------PAPEKSQPLGTIAAAPW 847 (1050)
Q Consensus 781 ~~GaDv~~~~~hKtf~~P~g~GGP-g~G~i~v~~~l~~~lpg~~vg~~~----~--~------~~~~~~~~t~~i~sa~~ 847 (1050)
++|+|+++++.||||+ || |+|++++++++.+.+++...|... + . ..+..+.+|+++..
T Consensus 212 ~l~~Df~afsgHKwl~------gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~--- 282 (405)
T COG0520 212 ELGCDFLAFSGHKWLL------GPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAG--- 282 (405)
T ss_pred hcCCCEEEEccccccc------CCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHH---
Confidence 7899999999999984 67 899999999888777433333210 0 0 01122445555542
Q ss_pred hhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCC-ccceeEEEecccccccCCCCHHHHHHH
Q 001579 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1050)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g-~~~~e~i~~~~~~~~~~g~~~~~vakr 926 (1050)
...+..| +.++...|+.++.++...+++|+.++|+++..+..-|+.. .....+.|.+. ++...++++.
T Consensus 283 --~i~l~aA---l~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~------~~~~~dv~~~ 351 (405)
T COG0520 283 --AIGLAAA---LDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVK------GIHPHDVATL 351 (405)
T ss_pred --HHhHHHH---HHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeC------CCCHHHHHHH
Confidence 1222333 4455555677888888899999999999874443223321 12223445543 6789999999
Q ss_pred HHHCCcccCCCCC---C------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 927 LMDYGFHGPTMSW---P------VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 927 L~d~Gi~~~~~~~---p------v~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
|.++||.++...+ | +.+++|+++..++|+||||+|+++|+++.+
T Consensus 352 L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 352 LDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred HHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 9999988754322 2 346699999999999999999999998764
No 27
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.94 E-value=8.4e-25 Score=256.03 Aligned_cols=360 Identities=16% Similarity=0.090 Sum_probs=253.8
Q ss_pred CHHHHHHHHHHHhcCCCccccccCCCCCCCCCcHHHHHHHHhCC-CcccccCCChhHHhhhHHHHHHHHHHHHHHhcCC-
Q 001579 149 TESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL- 226 (1050)
Q Consensus 149 sE~e~~~~~~~la~~n~~~~~~lG~g~~~~~~p~~i~~~i~~~~-~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~- 226 (1050)
.-.++++++..+. .+..|.+.-+.|. .|..+.+.+.+-- +|+...+.......+...+.+.++++.+++++|.
T Consensus 5 ~~~~~r~~fp~l~-~~~~yld~a~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~ 79 (401)
T PRK10874 5 NPAQFRAQFPALQ-DAGVYLDSAATAL----KPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAP 79 (401)
T ss_pred CHHHHHHhCCCcC-CceEEEeCCcccC----CCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3455666665442 3556766666664 4444433332100 1211111122223456677888999999999999
Q ss_pred CCcceeEecchHHHHHHHHHHhhh-hcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cCC
Q 001579 227 PMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG 296 (1050)
Q Consensus 227 ~~anasl~d~~Taa~eA~~la~~~-~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~ 296 (1050)
++.++.+++|+|.++..++.++.. ..++||+||+++.+||++...++..++..|++++.++. +++++ +++
T Consensus 80 ~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~ 159 (401)
T PRK10874 80 DAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITP 159 (401)
T ss_pred CCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCc
Confidence 677898999999887777655421 11378999999999999988887777778999888754 34555 678
Q ss_pred CeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecCccccccCCCCCcceEEEE
Q 001579 297 DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLA 374 (1050)
Q Consensus 297 ~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la 374 (1050)
+|++|++.+| |.+|.+.|+++|+++||++|++++|++ ..+++... +..++|+|++++|++++.+| ||+|+++
T Consensus 160 ~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~-a~~~g~~~~~~~~~~~d~~~~s~~K~~gp-----~G~G~l~ 233 (401)
T PRK10874 160 RTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDG-AQGAVHFPADVQALDIDFYAFSGHKLYGP-----TGIGVLY 233 (401)
T ss_pred CcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEC-CcccccccCCchhcCCCEEEEecccccCC-----CccEEEE
Confidence 9999999987 689999999999999999999999943 33444332 33578999999998445333 4579999
Q ss_pred EehhhhhcCCCcEEeEee-cCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Q 001579 375 TSQEYKRMMPGRIVGVSI-DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGL 453 (1050)
Q Consensus 375 ~~~~~~r~lpgrivG~s~-d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~ 453 (1050)
+++++.+.+++...|... +. ..+. ....++.+.|.|.||.|+ ....++.+++ .++...|+.++.+++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~e~Gt~~~---~~~~al~~al--~~l~~~g~~~~~~~~~~l 304 (401)
T PRK10874 234 GKSELLEAMSPWQGGGKMLTE---VSFD-GFTPQSAPWRFEAGTPNV---AGVIGLSAAL--EWLADIDINQAESWSRSL 304 (401)
T ss_pred EchHHHhcCCCeecCCcceEe---eccC-ccCCCCChhhccCCCcCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHHH
Confidence 999999888765433211 10 0010 111233455778899998 4566666665 556667888999999999
Q ss_pred HHHHHHHHhcCCCEEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeeeec------------CCeEEEEeccCCCHHH
Q 001579 454 AGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------------SNTVTASFDETTTLED 519 (1050)
Q Consensus 454 a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~i~~~L~~~GI~~~~~~------------~~~lris~~e~~t~ed 519 (1050)
+++++++|+++.|++++..+....+.|.+++ +.++.+.|.++||.++... .+.+|+|++.+||++|
T Consensus 305 ~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~ed 384 (401)
T PRK10874 305 ATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSD 384 (401)
T ss_pred HHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEEEEecccCCHHH
Confidence 9999999999833887743333345666655 7889999999999876421 4789999999999999
Q ss_pred HHHHHHHHh
Q 001579 520 VDKLFIVFA 528 (1050)
Q Consensus 520 Id~lv~~l~ 528 (1050)
||+|+++|.
T Consensus 385 id~ll~al~ 393 (401)
T PRK10874 385 VDALVNAVD 393 (401)
T ss_pred HHHHHHHHH
Confidence 999999996
No 28
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.94 E-value=9.6e-26 Score=261.26 Aligned_cols=328 Identities=21% Similarity=0.194 Sum_probs=241.9
Q ss_pred CCcHHHHHHHHhCC-CcccccCC--ChhHHhhhHHHHHHHHHHHHHHhcCCCC-cceeEecchHHHHHHHHHHhhhhcCC
Q 001579 179 HVPPVILRNIMENP-AWYTQYTP--YQAEIAQGRLESLLNFQTMIADLTGLPM-SNASLLDEGTAAAEAMAMCNNIQKGK 254 (1050)
Q Consensus 179 ~~p~~i~~~i~~~~-~~~t~ytp--yq~eisqG~le~l~e~q~~ia~L~G~~~-anasl~d~~Taa~eA~~la~~~~~~~ 254 (1050)
.+|..+.+.+.+-- .|+. .| .....++...+.+.++++.+++++|++. .++.+..++|.+++.++.++....++
T Consensus 10 ~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~ 87 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYA--NPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKP 87 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGS--STSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTT
T ss_pred CCCHHHHHHHHHHHHHhhh--cCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccc
Confidence 47887766665310 1111 22 1122345567888999999999999998 88889999998888877766321237
Q ss_pred CCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHh
Q 001579 255 KKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA 324 (1050)
Q Consensus 255 gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~ 324 (1050)
+++|+++...|+++..+|...++..|+++++++. +++++ ++++++.|++++- +.+|.+.|+++|+++||+
T Consensus 88 g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~ 167 (371)
T PF00266_consen 88 GDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHE 167 (371)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhc
Confidence 8999999999999999998877788999988864 34555 7789999999875 789999999999999999
Q ss_pred CCcEEEEEecCccccCCC-CCCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEe
Q 001579 325 NGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA 403 (1050)
Q Consensus 325 ~galliV~a~~~alg~l~-~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~ 403 (1050)
+|++++|++ ..++|.+. +..++|+|++++++|+|++ +||+|++++++++.+++.+...|+..- ....+.
T Consensus 168 ~~~~~~vD~-~~~~g~~~id~~~~~~D~~~~s~~Kl~g-----p~G~g~l~v~~~~~~~~~p~~~~~~~~----~~~~~~ 237 (371)
T PF00266_consen 168 YGALLVVDA-AQSAGCVPIDLDELGADFLVFSSHKLGG-----PPGLGFLYVRPEAIERLRPAKPGGGYL----DFPSLQ 237 (371)
T ss_dssp TTSEEEEE--TTTTTTSS--TTTTTESEEEEESTSTTS-----SSTEEEEEEEHHHHHHHHTSSSSSSTT----THHHHH
T ss_pred cCCceeEec-hhccccccccccccccceeeecccccCC-----CCchhhheehhhhhhcccccccccccc----ccccch
Confidence 999999954 34666553 4578999999999955854 467999999999888886555553210 000000
Q ss_pred -cccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC----CCccEE
Q 001579 404 -MQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDTV 478 (1050)
Q Consensus 404 -lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~----~~~~~v 478 (1050)
........|++.||.|+. .++++..++ .++...|++++.+|+.++++++.+.|+++++++++++ .....+
T Consensus 238 ~~~~~~~~~~~~~GT~~~~---~~~~l~~al--~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 312 (371)
T PF00266_consen 238 EYGLADDARRFEGGTPNVP---AIYALNEAL--KLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIV 312 (371)
T ss_dssp HHCHHSTTTGSSSSS--HH---HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEE
T ss_pred hcccccccccccccceeee---hhhhHHHHH--hhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceE
Confidence 001234456678899984 455555555 5556779999999999999999999999976888652 123467
Q ss_pred EEecCC--HHHHHHHHHHcCceeeee------------cCCeEEEEeccCCCHHHHHHH
Q 001579 479 KVKCAD--AHAIASAAYKIEMNLRVV------------DSNTVTASFDETTTLEDVDKL 523 (1050)
Q Consensus 479 ~i~~~~--~~~i~~~L~~~GI~~~~~------------~~~~lris~~e~~t~edId~l 523 (1050)
+|.+++ +.++.+.|.++||.++.- .++.||+|++.+||++|||+|
T Consensus 313 ~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 313 SFNLPGSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEEETTSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred EEeecCCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 777766 889999999999998651 138999999999999999987
No 29
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.94 E-value=7.1e-25 Score=256.37 Aligned_cols=355 Identities=17% Similarity=0.109 Sum_probs=250.2
Q ss_pred HHHHHHHHHhcCCCccccccCCCCCCCCCcHHHHHHHHh---CCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCC-
Q 001579 152 QMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIME---NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP- 227 (1050)
Q Consensus 152 e~~~~~~~la~~n~~~~~~lG~g~~~~~~p~~i~~~i~~---~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~- 227 (1050)
++++++..+. ++..|.+.-+.|. .|..+.+.+.+ ....-..+.+|. ..+-..+.+.++++.+++++|.+
T Consensus 5 ~~r~~fp~l~-~~~iyld~a~~~~----~p~~v~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~la~~~g~~~ 77 (398)
T TIGR03392 5 QFRQQFPALQ-DGTVYLDSAATAL----KPQAVIDATQQFYRLSSGTVHRSQHQ--QAQSLTARYELARQQVARFLNAPD 77 (398)
T ss_pred HHHHhCCccC-CCeEEeeCccccC----CCHHHHHHHHHHHHhcCCCCCCcccH--HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3455554432 3456766666664 44555433332 111011122222 23445567888999999999995
Q ss_pred CcceeEecchHHHHHHHHHHhhh-hcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cCCC
Q 001579 228 MSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGD 297 (1050)
Q Consensus 228 ~anasl~d~~Taa~eA~~la~~~-~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~~ 297 (1050)
+.++.++.|+|.++..++.++.. ..++||+||+++..|+++...+...++..|++++.++. +++++ ++++
T Consensus 78 ~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~ 157 (398)
T TIGR03392 78 AENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPR 157 (398)
T ss_pred CCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccC
Confidence 67888999999887776655421 01378999999999999888777667778999988754 34555 6788
Q ss_pred eeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecCccccccCCCCCcceEEEEE
Q 001579 298 VCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLAT 375 (1050)
Q Consensus 298 t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~ 375 (1050)
|++|++.+| |.+|.+.|+++|+++||++|++++|++ ..+++... +..++++|++++|++++.+| +|.||+++
T Consensus 158 t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~~~s~~K~~gp-----~G~G~l~~ 231 (398)
T TIGR03392 158 TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDG-AQGVVHGPPDVQALDIDFYAFSGHKLYGP-----TGIGVLYG 231 (398)
T ss_pred ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCCCCChhhcCCCEEEEecccccCC-----CceEEEEE
Confidence 999999987 789999999999999999999999943 33444332 23568999999999445334 35899999
Q ss_pred ehhhhhcCCCcEEeEee-cCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Q 001579 376 SQEYKRMMPGRIVGVSI-DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLA 454 (1050)
Q Consensus 376 ~~~~~r~lpgrivG~s~-d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a 454 (1050)
++++.+++++...|... +..... ..+.++.+.|+|.||+|+ .+.+++.+++ .++...|++++.+++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~e~GT~~~---~~~~a~~~al--~~l~~~g~~~i~~~~~~l~ 302 (398)
T TIGR03392 232 KTELLEAMPPWQGGGKMLSHVSFD----GFIPQAVPHRFEAGTPNI---AGVIGLSAAL--EWLTDIDIAAAEAWSVSLA 302 (398)
T ss_pred cHHHHhhCCCeecCCceEeecccc----ccccCCChhhccCCCCCH---HHHHHHHHHH--HHHHHhCHHHHHHHHHHHH
Confidence 99998888765433211 100000 112234455778999998 4556666665 5555678999999999999
Q ss_pred HHHHHHHhcCCCEEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeeeec------------CCeEEEEeccCCCHHHH
Q 001579 455 GTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD------------SNTVTASFDETTTLEDV 520 (1050)
Q Consensus 455 ~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~i~~~L~~~GI~~~~~~------------~~~lris~~e~~t~edI 520 (1050)
+++++.|+++.++++...+....++|.+++ +.++.+.|.++||.++... ++.||+|++.+||++||
T Consensus 303 ~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei 382 (398)
T TIGR03392 303 DLAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDV 382 (398)
T ss_pred HHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHH
Confidence 999999999844887743333356666655 7889999999999886421 46899999999999999
Q ss_pred HHHHHHHh
Q 001579 521 DKLFIVFA 528 (1050)
Q Consensus 521 d~lv~~l~ 528 (1050)
|+|+++|+
T Consensus 383 ~~l~~~l~ 390 (398)
T TIGR03392 383 DALVDAVG 390 (398)
T ss_pred HHHHHHHH
Confidence 99999996
No 30
>PLN03032 serine decarboxylase; Provisional
Probab=99.94 E-value=1e-24 Score=250.44 Aligned_cols=297 Identities=16% Similarity=0.198 Sum_probs=212.6
Q ss_pred ccHHHHHHHHHHHHHHhhCCCeee---eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFDSFS---LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d~~~---l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
....+++.++.+|+++++|++... +++++|++++. ++++.+++.. ++.+|+++..+|.+....+.+.|+++
T Consensus 62 ~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl---~al~~ar~~~---~~~~vi~s~~~H~Sv~kaa~~lg~~~ 135 (374)
T PLN03032 62 VHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNL---HGILVGREVF---PDGILYASRESHYSVFKAARMYRMEA 135 (374)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHH---HHHHHHHHhC---CCcEEEeCCCceeHHHHHHHHcCCCC
Confidence 357899999999999999997532 45556666554 4444333211 23478999999999999999999999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcC-----CEEEEeccccccccccC-
Q 001579 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG-----GQVYMDGANMNAQVGLT- 777 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G-----~~v~vD~A~~~al~gl~- 777 (1050)
+.||+|++|.+|+++|+++|++...++.+|+++..| .+|.++ ||++|+++|+++| +++|||+|+..+...+.
T Consensus 136 ~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~id-pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~ 214 (374)
T PLN03032 136 VKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVD-DLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVS 214 (374)
T ss_pred eEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCC-CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccC
Confidence 999999999999999999998543468888888886 589999 8999999999997 48999998643333221
Q ss_pred -C---CCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHH
Q 001579 778 -S---PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1050)
Q Consensus 778 -~---pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1050)
. ....++|.+++++||+++.|. |.|++++++.+...+......... .. . .+.++. ++..+
T Consensus 215 ~~~~~~~~~~vDSis~s~HK~~g~P~-----g~G~ll~r~~~~~~~~~~~~Yl~~------~d-~--ti~gSR--~g~~~ 278 (374)
T PLN03032 215 RAPEVTFRKPIGSVSVSGHKFLGCPM-----PCGVALTRKKHVKALSQNVEYLNS------RD-A--TIMGSR--NGHAP 278 (374)
T ss_pred CCcccCCCcCCcEEEECcccccCCCc-----CeEEEEEEchhhHhhccCCcccCC------CC-C--cccCCC--chHHH
Confidence 1 123479999999999876554 456888887655433211100000 00 1 111111 12345
Q ss_pred HHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCc
Q 001579 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1050)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi 932 (1050)
+..|+.++.+|.+|+++.+++++++++|+.++|++. ++++. + |....++|..+ ..+ .+ .+||
T Consensus 279 l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~-~---p~~~~V~f~~~--------~~~----~~-~~~w 341 (374)
T PLN03032 279 LYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRL-N---ELSSTVVFERP--------MDE----AF-IKKW 341 (374)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEE-C---CCceEEEEcCC--------CcH----hH-hhee
Confidence 678999999999999999999999999999999886 55532 2 33333344321 111 12 2689
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 933 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 933 ~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
++.+. .+.++|+++...+++.+|+|+++|+++
T Consensus 342 ~l~~~----~~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 342 QLACE----GDIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred eeccc----CCEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 88754 368999999999999999999999764
No 31
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=8e-25 Score=258.15 Aligned_cols=309 Identities=17% Similarity=0.125 Sum_probs=232.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCC-CcceeEecchHHHHHHHHHHhhh-hcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEE
Q 001579 207 QGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1050)
Q Consensus 207 qG~le~l~e~q~~ia~L~G~~-~anasl~d~~Taa~eA~~la~~~-~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~ 284 (1050)
.-..+.+.++++.+++++|.+ +.++.++.|+|.++..++.++.. ..++|++|+++..+||++...++.+++..|++++
T Consensus 72 ~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~ 151 (424)
T PLN02855 72 AKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLK 151 (424)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEE
Confidence 334566788999999999996 46899999999877766544311 1137899999999999999988877777899988
Q ss_pred EcCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEE
Q 001579 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1050)
Q Consensus 285 ~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivv 353 (1050)
.++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|++ .++.+... +..++|+|+++
T Consensus 152 ~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~-a~~~g~~~~~~~~~~~d~~~ 230 (424)
T PLN02855 152 FVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDA-CQSVPHMPVDVQTLGADFLV 230 (424)
T ss_pred EEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEh-hhhcCCcCCCchhcCCCEEE
Confidence 8754 34555 6778999999987 789999999999999999999999942 33444332 34678999999
Q ss_pred ecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH
Q 001579 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1050)
Q Consensus 354 gs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~ 433 (1050)
+|++++.+| +|.|++++++++.+++++.+.|++.... . |......++.+.|+|.||+|+ .+.+++.+++
T Consensus 231 ~s~~K~~gp-----~G~G~l~~~~~~~~~~~p~~~g~~~~~~--~-~~~~~~~~~~~~r~e~GT~~~---~~~~~l~~al 299 (424)
T PLN02855 231 ASSHKMCGP-----TGIGFLWGKSDLLESMPPFLGGGEMISD--V-FLDHSTYAPPPSRFEAGTPAI---GEAIGLGAAI 299 (424)
T ss_pred eecccccCC-----CccEEEEEchhhhhcCCCEecCCCceee--e-ecCccccCCChhhccCCChHH---HHHHHHHHHH
Confidence 999556433 4589999999999889887766432100 0 100001133455788999998 4555556665
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC------CccEEEEecCC--HHHHHHHHHHc-Cceeeee--
Q 001579 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP------FFDTVKVKCAD--AHAIASAAYKI-EMNLRVV-- 502 (1050)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~------~~~~v~i~~~~--~~~i~~~L~~~-GI~~~~~-- 502 (1050)
.++...|++++.+++.+++++++++|+++.+++++.+. ....++|.+++ +.++.+.|.++ ||.++.-
T Consensus 300 --~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~ 377 (424)
T PLN02855 300 --DYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHH 377 (424)
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhh
Confidence 56666799999999999999999999998339988431 23467777765 78899999887 9987631
Q ss_pred ----------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 503 ----------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 503 ----------~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
.++.+|+|++.+||.+|||+|+++|+.
T Consensus 378 c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~ 414 (424)
T PLN02855 378 CAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKD 414 (424)
T ss_pred hhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHH
Confidence 136799999999999999999999963
No 32
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.94 E-value=4.7e-24 Score=249.81 Aligned_cols=380 Identities=14% Similarity=0.115 Sum_probs=255.7
Q ss_pred CCcccCCCCCHHHHHHHHHHHhccccCcccccccccccccCcchhh-hhccccccccccCCCCCchhhcccHHHHHHHHH
Q 001579 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATT-EMMPVTWPSFANIHPFAPADQAQGYQEMFNNLG 638 (1050)
Q Consensus 560 ~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~-~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~ 638 (1050)
++| +++++.+|+++.+...--.|... ....+|+||.+..+.. +++...+.+ ++..| ..+....++++++.
T Consensus 16 ~~p--~~~~~~~~~~~~~~~~iyld~~a--~~~~~~~~tt~~~p~~~~~~~~~l~~----~~~np-~s~~~~~~le~~~~ 86 (431)
T TIGR01788 16 RMP--EEEMPPDAAYQLIHDELSLDGNP--RLNLATFVTTWMEPEARKLMDETINK----NMIDK-DEYPQTAEIENRCV 86 (431)
T ss_pred cCC--CCCCCHHHHHHHHHHHhhhcCCc--ceeeeeeeCCCCCHHHHHHHHHHHhc----CCCCc-ccCccHHHHHHHHH
Confidence 456 68899999999999765545432 3456788887655543 222111111 11122 22344558999999
Q ss_pred HHHHHhhCCC-e---eeec-cCchHHHHHHHHHHHHHHH-H---hcCCC-CCCEEEEcCCCCCccHHHHHhCCCEEEEEc
Q 001579 639 EWLCTITGFD-S---FSLQ-PNAGAAGEYAGLMVIRAYH-K---ARGDH-HRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1050)
Q Consensus 639 ~~lael~G~d-~---~~l~-~~sGa~ge~a~Llair~y~-~---~~G~~-~r~~Vlip~saHgt~pa~a~~~G~~vv~V~ 708 (1050)
+|+++++|++ . ..+. +++|++++..++.++|... . ..|.. .+..|+++..+|.+....+.+.|++++.|+
T Consensus 87 ~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~ 166 (431)
T TIGR01788 87 NMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVP 166 (431)
T ss_pred HHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEe
Confidence 9999999998 2 2232 4556666654554444211 1 11211 234788999999888888888999999999
Q ss_pred CCCC-CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHc------CCEEEEeccccccccccCC--
Q 001579 709 TDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN------GGQVYMDGANMNAQVGLTS-- 778 (1050)
Q Consensus 709 ~d~~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~------G~~v~vD~A~~~al~gl~~-- 778 (1050)
+|++ |.+|+++|+++|+ ++|.+|+++..| .+|.++ ||++|+++|+++ |+++|||+|+..+...+..
T Consensus 167 ~d~~~~~vd~~~L~~~i~---~~t~lV~~t~g~t~tG~id-pi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~ 242 (431)
T TIGR01788 167 MDPGRYVIDPEQVVEAVD---ENTIGVVCILGTTYTGEYE-DVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPD 242 (431)
T ss_pred cCCCceeeCHHHHHHHHh---hCCeEEEEEeCCCCCcccC-CHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCC
Confidence 9886 5999999999998 789999999986 589999 899999999999 9999999986522211111
Q ss_pred -C---CcccCcEEEeCCccccccCCCCCCCcceeeeeccc--ccCCCCC--CccccCCCCCCCCCCCCCCCCCcchhhhH
Q 001579 779 -P---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPS--HPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1050)
Q Consensus 779 -p---g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~--l~~~lpg--~~vg~~~~~~~~~~~~~t~~i~sa~~g~~ 850 (1050)
+ ...++|.+++|.||++..| .|+|+++++++ +.+.+.- ...+... .. ..+..+..|.
T Consensus 243 ~~~~~~~~~~DSis~s~HK~~~~P-----~g~G~l~~r~~~~l~~~~~~~~~yl~~~~------~~---~t~~~sR~g~- 307 (431)
T TIGR01788 243 LEWDFRLPRVKSINVSGHKYGLVY-----PGVGWVIWRDEEALPEELIFHVNYLGGDE------PT---FTLNFSRPAN- 307 (431)
T ss_pred chhhcCCCCceEEEECchhccCCC-----CCcEEEEEeChHHcchhheecccccCCCC------CC---cceecCchHH-
Confidence 1 2347899999999986323 36789999864 3332210 0111100 00 0111111111
Q ss_pred HHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH
Q 001579 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1050)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~ 928 (1050)
.++..|+.+..+|.+|++++.++++++++|+.++|++. ++++.++ +..+.+.|.+.+.. ..+.+..+++++|.
T Consensus 308 -~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~---~~~~iV~Fr~~~~~-~~~~~~~~l~~~L~ 382 (431)
T TIGR01788 308 -QVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDG---SGIPLVAFKLKDDA-DPGYTLYDLSHRLR 382 (431)
T ss_pred -HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCC---CCceEEEEEeCCCC-CCCcCHHHHHHHHH
Confidence 23357999999999999999999999999999999876 5554221 23444555544211 12356789999999
Q ss_pred HCCcccCCCCCC--CC--CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 929 DYGFHGPTMSWP--VP--GTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 929 d~Gi~~~~~~~p--v~--~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
++||.+.....| +. -.+|+++....+++.+|+|+++|++++.++
T Consensus 383 ~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 383 ERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred HCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 999986543333 22 257999988899999999999999998764
No 33
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.94 E-value=8e-25 Score=245.53 Aligned_cols=310 Identities=18% Similarity=0.242 Sum_probs=223.6
Q ss_pred HHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHH-HHHhcCCCCCCEEEEcCCCCCccHHHHHh---CCCEEE
Q 001579 630 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRA-YHKARGDHHRNVCIIPVSAHGTNPATAAM---CGMKIV 705 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~-y~~~~G~~~r~~Vlip~saHgt~pa~a~~---~G~~vv 705 (1050)
..+++++.++.+++++|.+...+..+||+. ++..++|+. +...+...+++.||++...|...-..++. .|++|.
T Consensus 42 A~~~ve~AR~~iA~llga~~~eIiFTSG~T--EsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vt 119 (386)
T COG1104 42 ARKAVEEAREQIAKLLGADPEEIIFTSGAT--ESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVT 119 (386)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEecCCc--HHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEE
Confidence 568899999999999999976555555532 244455543 11111123466889888877544444443 599999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccC
Q 001579 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1050)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~Ga 784 (1050)
.+++|.+|.+|+++|+++|+ ++|.+|.|.+.| ..|+++ ||++|+++|+++|+++|+|++|..+...+ .+.++++
T Consensus 120 yl~V~~~G~v~~e~L~~al~---~~T~LVSim~aNnE~G~IQ-pI~ei~~i~k~~~i~fHvDAvQa~Gkipi-~~~~~~v 194 (386)
T COG1104 120 YLPVDSNGLVDLEQLEEALR---PDTILVSIMHANNETGTIQ-PIAEIGEICKERGILFHVDAVQAVGKIPI-DLEELGV 194 (386)
T ss_pred EeCCCCCCeEcHHHHHHhcC---CCceEEEEEecccCeeecc-cHHHHHHHHHHcCCeEEEehhhhcCceec-cccccCc
Confidence 99999999999999999997 899999999985 699999 79999999999999999999986544332 3456789
Q ss_pred cEEEeCCccccccCCCCCCC-cceeeeeccc--ccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHH
Q 001579 785 DVCHLNLHKTFCIPHGGGGP-GMGPIGVKKH--LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGP-g~G~i~v~~~--l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~ 861 (1050)
|++.++.|| ++|| |+|++++++. +.+.+.|. ++ .+++..+|.|+.+ ..+ .+.| .
T Consensus 195 D~ls~SaHK-------~~GpkGiGaLyv~~~~~~~p~i~GG-----gQ--E~g~RsGTenv~~----Ivg---~~~A--~ 251 (386)
T COG1104 195 DLLSFSAHK-------FGGPKGIGALYVRPGVRLEPLIHGG-----GQ--ERGLRSGTENVPG----IVG---FGKA--A 251 (386)
T ss_pred ceEEeehhh-------ccCCCceEEEEECCCCccCceeccC-----cC--CCCCCCCCccHHH----HHH---HHHH--H
Confidence 999999999 4577 9999999764 34444432 11 1233445556542 111 1111 1
Q ss_pred HHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCC-CccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-
Q 001579 862 MMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS- 938 (1050)
Q Consensus 862 ~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~-g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~- 938 (1050)
.+..+.+.....+.....++|.++|++. ..+...|.. ....|.+.|.++ +++.+.+.-.|..+||.+++-+
T Consensus 252 ~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~------gv~gE~ll~~L~~~gI~vStGSA 325 (386)
T COG1104 252 EIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFP------GVEGESLLLALDLAGIAVSTGSA 325 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeC------CCcHHHHHHhccccCeEEecccc
Confidence 2223445556666667888899999875 455555532 334566677775 6788999999999999986422
Q ss_pred ------CC-------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001579 939 ------WP-------------VPGTLMIEPTESESKEELDRYCDALISIREEIAQI 975 (1050)
Q Consensus 939 ------~p-------------v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~~ 975 (1050)
-| -.++|||++...+|++|+|+++++|.++++.+++.
T Consensus 326 CsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~~ 381 (386)
T COG1104 326 CSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLREL 381 (386)
T ss_pred ccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 12 14789999999999999999999999999998873
No 34
>PRK02769 histidine decarboxylase; Provisional
Probab=99.94 E-value=2.5e-24 Score=248.86 Aligned_cols=301 Identities=17% Similarity=0.184 Sum_probs=217.1
Q ss_pred cHHHHHHHHHHHHHHhhCCCee---eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEE
Q 001579 629 GYQEMFNNLGEWLCTITGFDSF---SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~~---~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv 705 (1050)
+..+++.++.+++++++|++.. .+++++|++++ ++++..+++. .++++|+++..+|.++...+.+.|++++
T Consensus 62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean---~~a~~~ar~~---~~~~~ii~s~~~H~Sv~ka~~~lg~~~~ 135 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGN---LYGCYLAREL---FPDGTLYYSKDTHYSVSKIARLLRIKSR 135 (380)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHH---HHHHHHHHHh---CCCcEEEeCCCceehHHHHHHHcCCCCc
Confidence 5678999999999999999742 23445566655 3444433321 1346899999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcC---CEEEEeccccccccccCC---
Q 001579 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNG---GQVYMDGANMNAQVGLTS--- 778 (1050)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G---~~v~vD~A~~~al~gl~~--- 778 (1050)
.|+++++|.+|+++|+++|++.+.+|++|+++.++ .+|.++ |+++|+++|+++| +++|||||+..+...+..
T Consensus 136 ~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~id-pi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~ 214 (380)
T PRK02769 136 VITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAID-NIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPP 214 (380)
T ss_pred eeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCCceEEEEEecccceeecccCccc
Confidence 99999899999999999998544469999999986 589999 8999999999998 699999986433322211
Q ss_pred C--CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHH
Q 001579 779 P--GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1050)
Q Consensus 779 p--g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1050)
+ +..|+|.+++|.||+++.|+ |.|++++++++...+....-.... ... .+.+++ ++..++..
T Consensus 215 ~~d~~~~vDsis~s~HK~~~~P~-----g~G~l~~r~~~~~~~~~~~~yl~~------~d~---t~~GSR--~g~~~l~l 278 (380)
T PRK02769 215 PFSFADGIDSIAISGHKFIGSPM-----PCGIVLAKKKYVERISVDVDYIGS------RDQ---TISGSR--NGHTALLL 278 (380)
T ss_pred cCCccCCCCEEEECCcccCCCCC-----CcEEEEEehhhhhhcccCccccCC------CCC---CccCCC--CcHHHHHH
Confidence 1 22389999999999886554 467899987655444211100000 001 111111 12234568
Q ss_pred HHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 001579 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1050)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~ 935 (1050)
|+.|+.+|.+|+++..++++++++|+.++|++. ++++. .|....++|..+ + +++. +||++.
T Consensus 279 w~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~----~p~~~~v~f~~~--------~-~~~~-----~~w~l~ 340 (380)
T PRK02769 279 WAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWR----NPNSITVVFPCP--------S-ERIW-----KKWHLA 340 (380)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEc----CCCceEEEEcCC--------C-HHHH-----hCeeEc
Confidence 999999999999999999999999999999875 55432 234444444321 2 2332 689987
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 936 ~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
+.. +.++|+++..++++.||+|+++|.++.....+
T Consensus 341 ~~~----~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~~~ 375 (380)
T PRK02769 341 TSG----NQAHIITMPHHNKQQIDSLIDELIFDLKNPNK 375 (380)
T ss_pred ccC----CEEEEEECCCCCHHHHHHHHHHHHHHHhcccc
Confidence 553 68999999999999999999999988765433
No 35
>PLN02263 serine decarboxylase
Probab=99.93 E-value=3.8e-24 Score=248.95 Aligned_cols=297 Identities=18% Similarity=0.235 Sum_probs=217.4
Q ss_pred cHHHHHHHHHHHHHHhhCCCe---eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEE
Q 001579 629 GYQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~---~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv 705 (1050)
+..+++.++.+|+++++|++. .....++|+++++.++++.|.+. ++.++++|+.+|.+..+++.+.|++++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~------~~~vvy~S~~aH~Sv~KAa~llgi~~~ 203 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRESHYSVFKAARMYRMECV 203 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc------CCcEEEEcCCccHHHHHHHHhcCCcce
Confidence 678999999999999999964 23455677776665555555421 234788999999999999999999999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCC-ccccccCHHHHHHHHHHcCC-----EEEEeccccccccccCCC
Q 001579 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGG-----QVYMDGANMNAQVGLTSP 779 (1050)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~-~Gv~~~di~eI~~la~~~G~-----~v~vD~A~~~al~gl~~p 779 (1050)
.||+|++|++|+++|+++|++...++.+|+.+.++| +|.+| ||++|+++|+++|+ |+||||| ++|+..|
T Consensus 204 ~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiD-pi~eIa~i~~~~g~~~~~iwlHVDAA----~GG~~lP 278 (470)
T PLN02263 204 KVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVD-DLDLVIKTLEECGFSQDRFYIHCDGA----LFGLMMP 278 (470)
T ss_pred EeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCC-CHHHHHHHHHHcCCccCCeeEEEecc----chhhHhh
Confidence 999999999999999999986544567788888875 89999 89999999999997 9999997 3443222
Q ss_pred ---------CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhH
Q 001579 780 ---------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1050)
Q Consensus 780 ---------g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~ 850 (1050)
+..++|.++.|.||+++.|+++| .+.+++.+...+........ . ... .+..+.-|
T Consensus 279 f~~~~~~~df~~~vDSIsvD~HK~l~~P~~cg-----vll~R~~~~~~~~~~~~Yl~-----~-~d~---ti~gSR~g-- 342 (470)
T PLN02263 279 FVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCG-----VQITRMEHINVLSSNVEYLA-----S-RDA---TIMGSRNG-- 342 (470)
T ss_pred hcccccccCCCcCccEEEECCccccCCCcCEE-----EEEEehhhHhhhccChHhhC-----C-CCC---CcCCCCCc--
Confidence 22348999999999999887764 78888654433221110000 0 011 12211112
Q ss_pred HHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHH
Q 001579 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1050)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d 929 (1050)
..++..|+.++.+|.+|+++..++++.+|+|+.++|++. +.++. . |....++|..+ + ++ +..
T Consensus 343 ~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~-~---p~s~~V~f~~p--------~-~~----~~~ 405 (470)
T PLN02263 343 HAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREAGISAML-N---ELSSTVVFERP--------K-DE----EFV 405 (470)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-C---CCceEEEEecC--------c-hH----Hhh
Confidence 234568999999999999999999999999999999886 44432 1 33334445421 1 11 235
Q ss_pred CCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 930 YGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 930 ~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
+||++.+. ++.++|+++...+++.+|+|+++|++......
T Consensus 406 ~gW~L~~~----~~~~Hivvmphv~~~~id~fi~DL~~~~~~~~ 445 (470)
T PLN02263 406 RRWQLACQ----GNIAHVVVMPSVTIEKLDYFLKELVEKRSTWY 445 (470)
T ss_pred cceEEccC----CCcEEEEEcCCCCHHHHHHHHHHHHHHHhhhh
Confidence 79998764 35689999988899999999999999887543
No 36
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.93 E-value=1.9e-23 Score=244.62 Aligned_cols=305 Identities=18% Similarity=0.140 Sum_probs=226.6
Q ss_pred HHHHHHHHHHHHHHhcCCC-CcceeEecchHHHHHHHHHHhhhh-cCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEc
Q 001579 209 RLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1050)
Q Consensus 209 ~le~l~e~q~~ia~L~G~~-~anasl~d~~Taa~eA~~la~~~~-~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~ 286 (1050)
..+.+.++++.+++++|.+ +.++.++.|+|.++..++.++... .++|++|++++.+|+++...++..++..|++++.+
T Consensus 60 ~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v 139 (403)
T TIGR01979 60 ATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFI 139 (403)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEE
Confidence 4466788999999999998 568889999997776665544211 13789999999999999888887777789998887
Q ss_pred Cc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC-CCCCcccceEEEec
Q 001579 287 DL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGS 355 (1050)
Q Consensus 287 ~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~pg~~GaDivvgs 355 (1050)
+. +++++ +++++++|++++| |.+|.+.|+++|+++||++|++++|++ .++.+.+ .+..++|+|++++|
T Consensus 140 ~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~g~~~~~~~~~~~d~~~~s 218 (403)
T TIGR01979 140 PLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDG-AQAVPHMPVDVQALDCDFYVFS 218 (403)
T ss_pred ecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEc-hhhcCccccCccccCCCEEEEe
Confidence 54 34555 6788999999987 789999999999999999999999943 3455543 23457899999999
Q ss_pred CccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEe-cccccccccccccCCCccchhHHHHHHHHHH
Q 001579 356 AQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVA-MQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1050)
Q Consensus 356 ~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~-lqtreq~irRekaTsnict~~~l~a~~aa~y 434 (1050)
++++.+| +|+|++++++++.+.+++...|+.... .+.+. ...+....|.+.||+|+ ..++++.+++
T Consensus 219 ~~K~~gp-----~G~g~l~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~gt~~~---~~~~al~~al- 285 (403)
T TIGR01979 219 GHKMYGP-----TGIGVLYGKEELLEQMPPFLGGGEMIA----EVSFEETTYNEAPHKFEAGTPNI---AGVIGLGAAI- 285 (403)
T ss_pred cccccCC-----CCceEEEEchHHHhcCCCeecCCCcee----ecccCccccCCChhhcCCCCccH---HHHHHHHHHH-
Confidence 9444323 458899999998888876655532110 00000 00112234567788887 3455555554
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC----CccEEEEecCC--HHHHHHHHHHcCceeeee------
Q 001579 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP----FFDTVKVKCAD--AHAIASAAYKIEMNLRVV------ 502 (1050)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~----~~~~v~i~~~~--~~~i~~~L~~~GI~~~~~------ 502 (1050)
.++...|++++.+++.+++++++++|+++++++++.+. ....++|.+++ ..++.+.|.++||.++..
T Consensus 286 -~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~ 364 (403)
T TIGR01979 286 -DYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQP 364 (403)
T ss_pred -HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhHH
Confidence 55556689999999999999999999988449987532 23456676665 778999999999988531
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 503 ------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 503 ------~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
.++.+|+|++.+||++||++|+++|+
T Consensus 365 ~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~ 396 (403)
T TIGR01979 365 LMRRFGVPATCRASFYIYNTEEDIDALVEALK 396 (403)
T ss_pred HHHHhCCCCEEEEEeccCCCHHHHHHHHHHHH
Confidence 15789999999999999999999996
No 37
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.93 E-value=9.5e-24 Score=235.91 Aligned_cols=374 Identities=15% Similarity=0.213 Sum_probs=265.8
Q ss_pred CCCcccCCCCCHHHHHHHHHHHhccccCcccccccccccccC--cchhhhhccccccccccCCCCCchhhcccHHHHHHH
Q 001579 559 LTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMK--LNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1050)
Q Consensus 559 l~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~--~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~e 636 (1050)
.++| ..+++.+++++.+++....|-.+..+.. |+.++ -+...+.+...... ++|..+ +.+++..++..+
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~~~v---S~~v~~~~~~~~~l~~~~~~k---~N~l~~-d~fp~~~~~e~~ 124 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRLGLA---SGVVYWGEPELDKLIMEAYNK---FNPLHP-DEFPVVRKLEAE 124 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCcccCee---eEEEecCCcchhhHHHHHHhh---cCccCc-cccchhHHHHHH
Confidence 3678 6899999999999998877755433322 33222 22223333222223 477777 899999999999
Q ss_pred HHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHh----cCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC-
Q 001579 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA----RGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (1050)
Q Consensus 637 l~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~----~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~- 711 (1050)
...|+|.+++.+...+ +..++.+.++++++.+.|+.. +|. .+..++++.+.|-....++.+++++++.|++++
T Consensus 125 ~Vnm~~~L~~~~~~~~-g~~t~G~Ses~l~~~k~~~~~r~~~k~I-~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~ 202 (491)
T KOG1383|consen 125 CVNMIANLFNAPSDSC-GCGTVGGSESGLAAKKSYRNRRKAQKGI-DKPNIVTPQNVHAAFEKAARYFEVELREVPLDEG 202 (491)
T ss_pred HHHHHHHHhcCCcccc-CccccccchHHHHHHHHHHHHHHhccCC-CCccccchHHHHHHHHHHHhhEEEEEEeeecccc
Confidence 9999999999885422 222222334788888877542 344 345688899999888888999999999999984
Q ss_pred CCCCCHHHHHHHHHcCCCCEEEEEEEcCCC-ccccccCHHHHHHHHHH-cCCEEEEeccccccccccCCC-Cc-----cc
Q 001579 712 KGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHD-NGGQVYMDGANMNAQVGLTSP-GY-----IG 783 (1050)
Q Consensus 712 ~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~-~Gv~~~di~eI~~la~~-~G~~v~vD~A~~~al~gl~~p-g~-----~G 783 (1050)
+.++|+..+.+.++ +||++|+.+.|++ +|.++ |+++|.++.-+ +++++|||+| +|||..| +. ||
T Consensus 203 ~~~~D~~k~~~~i~---eNti~lv~~~~~~p~G~~e-~ve~l~~l~~e~w~ipiHvDa~----~GgFi~p~~~~~~~~fd 274 (491)
T KOG1383|consen 203 DYRVDPGKVVRMID---ENTIMLVGSLPNFPTGEIE-DVEKLADLLLEIWDIPIHVDAC----LGGFINPAGYLNEEEFD 274 (491)
T ss_pred ceEecHHHHHHHhc---cceEEEEEEcCCCCccchh-hHHHHHHHHHHHhCCceeeccc----CccccccccccCccccc
Confidence 58999999999998 8999999999985 99999 89999999999 9999999975 7888877 32 22
Q ss_pred -----CcEEEeCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHH
Q 001579 784 -----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1050)
Q Consensus 784 -----aDv~~~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1050)
.-.+..+.||. |+--+|+|.+.-+. ++.+. ..+..+ ...|+..++..+..+..| +..+++|
T Consensus 275 Fr~p~V~Sisa~~HKY-----Gl~~~G~~~vl~r~k~~~~~---q~~~~~---~w~Gg~y~s~TlngSR~g--~~va~~w 341 (491)
T KOG1383|consen 275 FRVPGVTSISADGHKY-----GLAPAGSSWVLYRNKELLPH---QLFFHT---DWLGGIYASPTLNGSRPG--SQVAAQW 341 (491)
T ss_pred cCCCCceeEeecccee-----eeeecCcEEEEEcccccccc---eEEEec---cccCccccCcccccCCcc--cHHHHHH
Confidence 12334456773 23334555555543 22111 000000 011333444444443333 4566789
Q ss_pred HHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 001579 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1050)
Q Consensus 858 a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~ 937 (1050)
+.|..+|.+||++.++++++++.+|++.|+++-.+..-|+ |.. .++.+.. ..++..++.+.|..+||+++.+
T Consensus 342 a~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gk--p~v--s~~~~~s----~~~~i~elsd~l~~~GW~lnal 413 (491)
T KOG1383|consen 342 AALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGK--PLV--SFILFGS----NDVNIFELSDLLRKKGWILNAL 413 (491)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCC--CcE--EEEEccC----CccchhhhhHHHHhcCcCcccc
Confidence 9999999999999999999999999999998733321232 221 2222221 2478899999999999999999
Q ss_pred CCCCCCEEEEEcCCCCCHHH-HHHHHHHHHHHHHHHHH
Q 001579 938 SWPVPGTLMIEPTESESKEE-LDRYCDALISIREEIAQ 974 (1050)
Q Consensus 938 ~~pv~~~lrI~~te~~t~ee-id~fv~aL~~i~~ei~~ 974 (1050)
.+| ..++||+|..+..++ .|+|+..++++++|+..
T Consensus 414 q~P--~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 414 QFP--AAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred CCC--CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 887 489999999888877 59999999999999987
No 38
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.93 E-value=1.4e-23 Score=235.58 Aligned_cols=290 Identities=17% Similarity=0.181 Sum_probs=223.6
Q ss_pred hHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHH--hhhh-cCCCCEEEEcCCCChhHHHHHHHhccCCCeEEE
Q 001579 208 GRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMC--NNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1050)
Q Consensus 208 G~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la--~~~~-~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~ 284 (1050)
-..+.+.+.++.||+++|+++.++.+++|||.+...++.. .... +.++++||++..+||+++..++.+ +..|++|.
T Consensus 41 ~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vt 119 (386)
T COG1104 41 EARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVT 119 (386)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHH-HhcCCeEE
Confidence 3567899999999999999999999999999544433332 1111 236889999999999999999887 77899999
Q ss_pred EcCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEE
Q 001579 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1050)
Q Consensus 285 ~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivv 353 (1050)
++++ ++|++ +.+||.+|.+.+. |.+|+|+||++|+++|+++|++++|++ ..++|-++ ++.++|+|++.
T Consensus 120 yl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDA-vQa~Gkipi~~~~~~vD~ls 198 (386)
T COG1104 120 YLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDA-VQAVGKIPIDLEELGVDLLS 198 (386)
T ss_pred EeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEeh-hhhcCceeccccccCcceEE
Confidence 9876 46767 8899999999986 679999999999999999999999954 34777554 56788999999
Q ss_pred ecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH
Q 001579 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1050)
Q Consensus 354 gs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~ 433 (1050)
.|+++|++|.| .|++++++.. ++.+.+.|... |.. +| .||.|+ .+..++..|+
T Consensus 199 ~SaHK~~GpkG-----iGaLyv~~~~--~~~p~i~GGgQ---------------E~g-~R-sGTenv---~~Ivg~~~A~ 251 (386)
T COG1104 199 FSAHKFGGPKG-----IGALYVRPGV--RLEPLIHGGGQ---------------ERG-LR-SGTENV---PGIVGFGKAA 251 (386)
T ss_pred eehhhccCCCc-----eEEEEECCCC--ccCceeccCcC---------------CCC-CC-CCCccH---HHHHHHHHHH
Confidence 99999987754 6789996654 24556666221 111 12 599998 4455555554
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCC--CC-ccEEEEecCC--HHHHHHHHHHcCceeee------
Q 001579 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL--PF-FDTVKVKCAD--AHAIASAAYKIEMNLRV------ 501 (1050)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~-G~~~l~~~--~~-~~~v~i~~~~--~~~i~~~L~~~GI~~~~------ 501 (1050)
-+..+.++....++..+-++|.++|.+. +.+.+.+. ++ .+.+.|.+++ ++.+.-.|..+||.++.
T Consensus 252 ---~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~~L~~~gI~vStGSACsS 328 (386)
T COG1104 252 ---EIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLLALDLAGIAVSTGSACSS 328 (386)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHHhccccCeEEeccccccC
Confidence 3334567788888999999999999976 44666543 22 3578888887 88888888889998742
Q ss_pred -----------e------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 502 -----------V------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 502 -----------~------~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
. -.+.||+|++.+||++|||+++++|..
T Consensus 329 ~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~ 373 (386)
T COG1104 329 GSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKE 373 (386)
T ss_pred CCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHH
Confidence 0 137899999999999999999999964
No 39
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=2.9e-23 Score=242.54 Aligned_cols=297 Identities=20% Similarity=0.192 Sum_probs=220.3
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEE
Q 001579 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1050)
Q Consensus 206 sqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1050)
+++..+.+.++++.+++++|.+..++.+..++|.++..+..++....++||+||+++.+|+++...+...++..|++++.
T Consensus 55 ~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~ 134 (397)
T TIGR01976 55 SRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKW 134 (397)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEE
Confidence 46667788999999999999987788888888876655444432111378999999999999998886666778988887
Q ss_pred cCc---------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC-CCCCcccceEEE
Q 001579 286 SDL---------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVV 353 (1050)
Q Consensus 286 ~~~---------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~pg~~GaDivv 353 (1050)
++. +++++ +++++++|++.+| |.+|.+.|+++|+++||++|++++|+. .++.+.. .+..++|+|+++
T Consensus 135 ~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~d~~~ 213 (397)
T TIGR01976 135 ARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDA-VHYAPHGLIDVQATGADFLT 213 (397)
T ss_pred EeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEeh-hhhccccCCCHHHcCCCEEE
Confidence 754 34555 6778999999988 789999999999999999999999943 3333322 234578999999
Q ss_pred ecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHH
Q 001579 354 GSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (1050)
Q Consensus 354 gs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa 432 (1050)
+|+ |+| ||..||+++++++++++.+....+ .. .....|.+.||.|+ ..+.++.++
T Consensus 214 ~s~~K~~-------g~~~G~l~~~~~~~~~l~~~~~~~----------~~----~~~~~~~~~gt~~~---~~~~~l~~a 269 (397)
T TIGR01976 214 CSAYKFF-------GPHMGILWGRPELLMNLPPYKLTF----------SY----DTGPERFELGTPQY---ELLAGVVAA 269 (397)
T ss_pred Eechhhc-------CCceEEEEEcHHHHhhCCCccccC----------cc----CCCcchhcCCCCCH---HHHHHHHHH
Confidence 998 544 245799999999888775433221 11 11233567899987 344455555
Q ss_pred H-HHHHhCc-----------ccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC----CCccEEEEecCC--HHHHHHHHHH
Q 001579 433 M-YAVYHGP-----------EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL----PFFDTVKVKCAD--AHAIASAAYK 494 (1050)
Q Consensus 433 ~-y~~~~g~-----------~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~----~~~~~v~i~~~~--~~~i~~~L~~ 494 (1050)
+ ++...|. ++++++.+++.+++++++++|+++++++++.+ ...+.+.+..++ +.++.++|.+
T Consensus 270 l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 349 (397)
T TIGR01976 270 VDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLAD 349 (397)
T ss_pred HHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHH
Confidence 5 2333332 14788899999999999999999866888743 133456666654 7889999999
Q ss_pred cCceeeee---------------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001579 495 IEMNLRVV---------------DSNTVTASFDETTTLEDVDKLFIVF 527 (1050)
Q Consensus 495 ~GI~~~~~---------------~~~~lris~~e~~t~edId~lv~~l 527 (1050)
+||.++.. ..+.+|+|++.++|++|||+|+++|
T Consensus 350 ~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 350 QGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 99998642 1357999999999999999999875
No 40
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.92 E-value=1.8e-23 Score=245.39 Aligned_cols=293 Identities=14% Similarity=0.098 Sum_probs=211.4
Q ss_pred HhcCCCCcceeEecchHHHHHHHHHHhhhhcC-CCCEEEEcCCCChhHHHHHHHhccCCCeEE----EEcC--------c
Q 001579 222 DLTGLPMSNASLLDEGTAAAEAMAMCNNIQKG-KKKTFIIASNCHPQTIDICITRADGFDIKV----VVSD--------L 288 (1050)
Q Consensus 222 ~L~G~~~anasl~d~~Taa~eA~~la~~~~~~-~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v----~~~~--------~ 288 (1050)
+|+|+++.++.+..++|.++..++.++ +..+ ++++|++++.+||++...|+..++..|+++ +.++ +
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 158 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRL 158 (406)
T ss_pred cccCCCCCcEEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCH
Confidence 899999889999999998777665543 2211 234788999999999988875556667776 3332 2
Q ss_pred hhhhc-c---CCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecC-ccccc
Q 001579 289 KDIDY-K---SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGV 361 (1050)
Q Consensus 289 ~~l~~-l---~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~-k~~g~ 361 (1050)
+++++ + +++|++|+++++ +.+|.+.|+++|+++||++|++++|++ .+++|.++ +..++|+|++++++ |+|+
T Consensus 159 ~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~-aq~~G~~~id~~~~gvD~~~~s~hK~l~- 236 (406)
T TIGR01814 159 EDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDL-AHAVGNVPLDLHDWGVDFACWCTYKYLN- 236 (406)
T ss_pred HHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEc-ccccCCcccccccCCCCEEEEcCccccC-
Confidence 34544 3 478999999987 568999999999999999999999943 45666543 44689999999999 5553
Q ss_pred cCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcc
Q 001579 362 PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE 441 (1050)
Q Consensus 362 P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~ 441 (1050)
|||| |+++++++....+.+++.|+.-..... .|........+..|+|.||+|+ .+.+++.+++ .++...
T Consensus 237 ----g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~GT~~~---~~~~~l~~al--~~~~~~ 305 (406)
T TIGR01814 237 ----AGPG-AGAFVHEKHAHTERPRLAGWWGHARPT-RFKMDNTLGLIPCGFRISNPPI---LSVAALRGSL--DIFDQA 305 (406)
T ss_pred ----CCCC-eEEEEehhhhhhcCCCCCcccCCCCcc-ccccccccCCCccceeeCCccH---HHHHHHHHHH--HHHHhc
Confidence 4566 667776655544555566652111100 0111110112334778899998 5566666665 566677
Q ss_pred cHHHHHHHHHHHHHHHHHHHhcC-C---CEEEcCCC----CccEEEEecC-CHHHHHHHHHHcCceeeeecCCeEEEEe-
Q 001579 442 GLKTIAQRVHGLAGTFALGLKKL-G---TVEVQGLP----FFDTVKVKCA-DAHAIASAAYKIEMNLRVVDSNTVTASF- 511 (1050)
Q Consensus 442 Gl~~ia~~~~~~a~~l~~~L~~~-G---~~~l~~~~----~~~~v~i~~~-~~~~i~~~L~~~GI~~~~~~~~~lris~- 511 (1050)
|++++.+++..+++++++.|+++ | +++++++. ....++|.++ .+.++.+.|.++||.+....++.||+|+
T Consensus 306 g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~~~~~~~iRiS~~ 385 (406)
T TIGR01814 306 GMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGDKREPSVIRVAPV 385 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEeccCCCeEEEech
Confidence 99999999999999999999875 2 38877531 2235777776 4888999999999988654457899999
Q ss_pred ccCCCHHHHHHHHHHHh
Q 001579 512 DETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 512 ~e~~t~edId~lv~~l~ 528 (1050)
+.+||++|||+++++|+
T Consensus 386 ~~~nt~~did~l~~~l~ 402 (406)
T TIGR01814 386 PLYNTFVDVYDAVNVLE 402 (406)
T ss_pred hccCCHHHHHHHHHHHH
Confidence 68999999999999996
No 41
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.92 E-value=6e-23 Score=237.67 Aligned_cols=361 Identities=18% Similarity=0.239 Sum_probs=234.7
Q ss_pred CHHHHHHHHHHHhccccCcccccccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC
Q 001579 569 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD 648 (1050)
Q Consensus 569 sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d 648 (1050)
||+|++..+.++-+.++....+.+.+..|++..+...+.......+.. ..| ....|..++..++++++++++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~la~~~g~~ 75 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNPHPIAVKAYDMFIETNL-GDP----GLFPGTKKIEEEVVGSLGNLLHLP 75 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCchHHHHHHHHHHhhcCC-CCc----ccCccHHHHHHHHHHHHHHHhCCC
Confidence 689999999999887776533343334466555543332211111111 111 122466788899999999999997
Q ss_pred eee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCCCCHHHHHHHHHcC
Q 001579 649 SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEAN 727 (1050)
Q Consensus 649 ~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~ 727 (1050)
... +..++|+.+...++.+++... ..+ .++++|+++...|.++...+++.|++++.+++++++.+|+++|+++++
T Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~-~~~-~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~-- 151 (373)
T TIGR03812 76 DAYGYIVSGGTEANIQAVRAAKNLA-REE-KRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLID-- 151 (373)
T ss_pred CCCeEEeccHHHHHHHHHHHHHHHH-hcc-CCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHh--
Confidence 532 445556554433333332211 111 234789999988877777788899999999998889999999999997
Q ss_pred CCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEecccccccccc-----CCCC----cccCcEEEeCCcccccc
Q 001579 728 RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-----TSPG----YIGADVCHLNLHKTFCI 797 (1050)
Q Consensus 728 ~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl-----~~pg----~~GaDv~~~~~hKtf~~ 797 (1050)
+++.++++..| |.+|.+. |+++|+++||++|+++++|+|+......+ ..+. ..|+|.++++.||+...
T Consensus 152 -~~~~~vv~~~~~~~tG~~~-~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~ 229 (373)
T TIGR03812 152 -DNTIGIVGIAGTTELGQID-DIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLS 229 (373)
T ss_pred -hCcEEEEEECCCCCCCccC-CHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCC
Confidence 45544444445 5689998 89999999999999999999874322111 1111 24889999999996542
Q ss_pred CCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHH
Q 001579 798 PHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAIL 877 (1050)
Q Consensus 798 P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~ 877 (1050)
|. |+.|+++.++++.+.+.... .... ..+.. ...++ + +...++.+++.+..++++|+.+..++..+
T Consensus 230 ~~----~~G~~~~~~~~~~~~l~~~~-~~~~----~~~~~--~~~gt-~--~~~~~~~~~~~l~~l~~~g~~~~~~~~~~ 295 (373)
T TIGR03812 230 PI----PAGGILFRSKSYLKYLSVDA-PYLT----VKKQA--TITGT-R--SGASAAATYAVIKYLGREGYRKIVAECME 295 (373)
T ss_pred cC----CceEEEEeCHHHHhhhcccC-cccC----CCCCc--ceEee-c--hhHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 32 22245555666555442110 0000 00000 00011 1 12234557788889999999999999999
Q ss_pred HHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHH
Q 001579 878 NANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKE 956 (1050)
Q Consensus 878 ~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~e 956 (1050)
++++|+++|+++ +...+. +..+.+.+.++ +..++.++|.++||.+..... ++.+||+++..+|++
T Consensus 296 ~~~~l~~~L~~~g~~~~~~----~~~~~v~~~~~--------~~~~v~~~L~~~gi~v~~~~~--~~~iRis~~~~~t~e 361 (373)
T TIGR03812 296 NTRYLVEELKKIGFEPVIE----PVLNIVAFEVD--------DPEEVRKKLRDRGWYVSVTRC--PKALRIVVMPHVTRE 361 (373)
T ss_pred HHHHHHHHHHhCCCeEEcC----CCceEEEEEeC--------CHHHHHHHHHHCCceeccCCC--CCEEEEEEECCCCHH
Confidence 999999999986 433332 23343444432 346899999999999864432 478999999999999
Q ss_pred HHHHHHHHHHHH
Q 001579 957 ELDRYCDALISI 968 (1050)
Q Consensus 957 eid~fv~aL~~i 968 (1050)
|+|+|+++|++|
T Consensus 362 did~l~~~L~~~ 373 (373)
T TIGR03812 362 HIEEFLEDLKEI 373 (373)
T ss_pred HHHHHHHHHhhC
Confidence 999999999864
No 42
>PLN02651 cysteine desulfurase
Probab=99.92 E-value=5.3e-23 Score=237.85 Aligned_cols=283 Identities=17% Similarity=0.139 Sum_probs=214.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHh-hhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEE
Q 001579 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN-NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1050)
Q Consensus 207 qG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~-~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1050)
....+.+.++++.+++++|.+..++.++.++|.++..++.+. ....+++++|++++.+||++...++.+. ..|++++.
T Consensus 39 ~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~-~~g~~v~~ 117 (364)
T PLN02651 39 WESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQ-QEGFEVTY 117 (364)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHH-hcCCEEEE
Confidence 344677889999999999999888989999987655544332 2112378999999999999998887654 57888887
Q ss_pred cCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC-CCCCcccceEEEe
Q 001579 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (1050)
Q Consensus 286 ~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~pg~~GaDivvg 354 (1050)
++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|++ .++.|.+ .+..++|+|++++
T Consensus 118 v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~-a~~~g~~~~~~~~~~~D~~~~ 196 (364)
T PLN02651 118 LPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDA-AQAVGKIPVDVDDLGVDLMSI 196 (364)
T ss_pred EccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEc-chhhCCcccCcccCCCCEEEe
Confidence 754 34555 7788999999886 689999999999999999999999943 3455543 3567899999999
Q ss_pred cCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHH
Q 001579 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1050)
Q Consensus 355 s~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y 434 (1050)
++++|++| +|.|+++++++...++.+.+.|... ..+++.||+|+ .+++++.+++
T Consensus 197 s~hK~~gp-----~G~g~l~v~~~~~~~l~p~~~g~~~-----------------~~~~~~GT~~~---~~~~~l~~al- 250 (364)
T PLN02651 197 SGHKIYGP-----KGVGALYVRRRPRVRLEPLMSGGGQ-----------------ERGRRSGTENT---PLVVGLGAAC- 250 (364)
T ss_pred chhhhCCC-----CceEEEEEcCCCCCCCCccccCCCc-----------------cCCccCCCccH---HHHHHHHHHH-
Confidence 99667544 4689999999988888776655211 12456899998 5677777776
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhc-CCCEEEcCC--C--C-ccEEEEecCC--HHHHHHHHHHcCceeee-----
Q 001579 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGL--P--F-FDTVKVKCAD--AHAIASAAYKIEMNLRV----- 501 (1050)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~-~G~~~l~~~--~--~-~~~v~i~~~~--~~~i~~~L~~~GI~~~~----- 501 (1050)
.++. ++.+++.+++.++++++.++|++ +++++++.+ + . ...++|.+++ +.+++++|.+ |.++.
T Consensus 251 -~~~~-~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~--i~v~~g~~c~ 326 (364)
T PLN02651 251 -ELAM-KEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKE--VAVSSGSACT 326 (364)
T ss_pred -HHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCC--EEEEchhhcC
Confidence 3333 35589999999999999999986 534998863 1 1 2367777776 7889999865 65531
Q ss_pred ------------e------cCCeEEEEeccCCCHHHHH
Q 001579 502 ------------V------DSNTVTASFDETTTLEDVD 521 (1050)
Q Consensus 502 ------------~------~~~~lris~~e~~t~edId 521 (1050)
+ ..+.||+|++.+||++|||
T Consensus 327 ~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 327 SASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 0 1368999999999999986
No 43
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=1.6e-22 Score=234.27 Aligned_cols=306 Identities=19% Similarity=0.148 Sum_probs=227.6
Q ss_pred hhhHHHHHHHHHHHHHHhcCCC-CcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEE
Q 001579 206 AQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1050)
Q Consensus 206 sqG~le~l~e~q~~ia~L~G~~-~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~ 284 (1050)
++...+.+.++++.+++++|.+ ..++.+++|+|.++..++.++.....++++|+++...|++....+...++..|++++
T Consensus 38 ~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (373)
T cd06453 38 SARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLK 117 (373)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEE
Confidence 4556777888999999999998 678888899997766666554321116899999999999988777666667788888
Q ss_pred EcCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEE
Q 001579 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1050)
Q Consensus 285 ~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivv 353 (1050)
.++. +++++ +++++++|++.+| |.+|.+.|+++|+++||++|+++++++ ..+.+.+. +..++|+|+++
T Consensus 118 ~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~-a~~~~~~~~~~~~~~~d~~~ 196 (373)
T cd06453 118 VVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDG-AQSAGHMPVDVQDLGCDFLA 196 (373)
T ss_pred EeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEh-hhhcCceeeeccccCCCEEE
Confidence 8854 34555 6778999999887 779999999999999999999999953 34445442 34578999999
Q ss_pred ecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEe-ecCCCCcceEEecccccccccccccCCCccchhHHHHHHH
Q 001579 354 GSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS-IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMA 431 (1050)
Q Consensus 354 gs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s-~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~a 431 (1050)
+++ |+|+ +|+.|++++++++.+.+.....|+. .+......+ +....+.+.+.+|+|++ .++++.+
T Consensus 197 ~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~t~~~~---~~~al~~ 263 (373)
T cd06453 197 FSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEET----TYADLPHKFEAGTPNIA---GAIGLGA 263 (373)
T ss_pred eccccccC------CCCcEEEEEchHHhhcCCCeecCCCcccccccccc----ccCCCccccCCCCCCHH---HHHHHHH
Confidence 998 5553 2567899999999888876554431 110000001 11234456677888874 4555555
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--CCccEEEEecCC--HHHHHHHHHHcCceeeee-----
Q 001579 432 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD--AHAIASAAYKIEMNLRVV----- 502 (1050)
Q Consensus 432 a~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~--~~~~~v~i~~~~--~~~i~~~L~~~GI~~~~~----- 502 (1050)
++ .++..+|++++.+++.++++++++.|+++++++++.+ .....+.|.+++ +.++.++|.++||.++..
T Consensus 264 al--~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~~ 341 (373)
T cd06453 264 AI--DYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQ 341 (373)
T ss_pred HH--HHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccchh
Confidence 54 6677789999999999999999999999955888742 223356666664 789999999999987531
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001579 503 -------DSNTVTASFDETTTLEDVDKLFIVF 527 (1050)
Q Consensus 503 -------~~~~lris~~e~~t~edId~lv~~l 527 (1050)
.++.||+|++.++|++|||+|+++|
T Consensus 342 ~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 342 PLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 1468999999999999999999875
No 44
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.92 E-value=1.6e-22 Score=234.91 Aligned_cols=292 Identities=17% Similarity=0.179 Sum_probs=216.8
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEE
Q 001579 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1050)
Q Consensus 206 sqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1050)
+....+.+.++++.+++++|.++.++.++.++|.++..++.+......++++|+++..+||++...++... ..|++++.
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~-~~G~~v~~ 115 (379)
T TIGR03402 37 GGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLE-KQGYKVTY 115 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHH-HcCCEEEE
Confidence 34456778899999999999998889999999988776665432111256899999999999998887643 47888888
Q ss_pred cCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEe
Q 001579 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (1050)
Q Consensus 286 ~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvg 354 (1050)
++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|++ ..+.|... +..++|+|+++.
T Consensus 116 v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~-~~~~g~~~~~~~~~~~D~~~~ 194 (379)
T TIGR03402 116 LPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDA-VQAVGKIPIDLKEMNIDMLSL 194 (379)
T ss_pred EccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEEC-cccccccccCcccCCCCEEEE
Confidence 754 34555 7788999999886 789999999999999999999999943 44555443 446789999999
Q ss_pred cCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHH
Q 001579 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1050)
Q Consensus 355 s~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y 434 (1050)
+++++++| +|+|+++++++. .+.+.+.|.. +..+++.||.|+ .+++++.+++
T Consensus 195 s~~K~~gp-----~G~g~l~v~~~~--~~~p~~~g~~-----------------~~~~~~~gt~~~---~~~~~l~~al- 246 (379)
T TIGR03402 195 SGHKLHGP-----KGVGALYIRKGT--RFRPLLRGGH-----------------QERGRRAGTENV---PGIVGLGKAA- 246 (379)
T ss_pred cHHHcCCC-----CceEEEEECCCC--CCCCcccCCc-----------------cCCCcCCCCccH---HHHHHHHHHH-
Confidence 99557544 458899998764 2333333310 011245789988 5566666665
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhc-CCCEEEcCCC--Cc-cEEEEecCC--HHHHHHHHHHcCceeeee------
Q 001579 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTVEVQGLP--FF-DTVKVKCAD--AHAIASAAYKIEMNLRVV------ 502 (1050)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~-~G~~~l~~~~--~~-~~v~i~~~~--~~~i~~~L~~~GI~~~~~------ 502 (1050)
.+. .++++++.+++.++.++++++|++ +.++++..++ .. ..+.|.++. +.++.+.|.++||.++.-
T Consensus 247 -~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~ 324 (379)
T TIGR03402 247 -ELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSG 324 (379)
T ss_pred -HHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCC
Confidence 222 346788889999999999999986 6448877532 21 245555554 788999998999987531
Q ss_pred -----------------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 503 -----------------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 503 -----------------~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
..+.||+|++.+||++|||+++++|+.
T Consensus 325 ~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~ 368 (379)
T TIGR03402 325 SLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPP 368 (379)
T ss_pred CCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 136899999999999999999999963
No 45
>PLN02590 probable tyrosine decarboxylase
Probab=99.91 E-value=2e-22 Score=240.36 Aligned_cols=382 Identities=13% Similarity=0.093 Sum_probs=248.3
Q ss_pred CCCCCHHHHHHHHHHHhccccCcccccccccccc---cCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHH
Q 001579 565 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCT---MKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 641 (1050)
Q Consensus 565 ~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t---~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~l 641 (1050)
.++.+-+++++.+.+..........+.-++|+.. .......+++... .+-+.+.. +.+++..+++.++.+|+
T Consensus 105 ~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~sa----~n~~~~~~-~~sPa~t~lE~~vi~wl 179 (539)
T PLN02590 105 ERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAG----LSVVGFTW-LTSPAATELEIIVLDWL 179 (539)
T ss_pred CCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHHh----cccccCCc-ccCchhHHHHHHHHHHH
Confidence 4567888999999886655543333344556421 1111112332211 12223333 66778889999999999
Q ss_pred HHhhCCCee--------eeccCchHHHHHHHHHHHHHHHH-hcCCC--CCCEEEEcCCCCCccHHHHHhCCC---EEEEE
Q 001579 642 CTITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHK-ARGDH--HRNVCIIPVSAHGTNPATAAMCGM---KIVSV 707 (1050)
Q Consensus 642 ael~G~d~~--------~l~~~sGa~ge~a~Llair~y~~-~~G~~--~r~~Vlip~saHgt~pa~a~~~G~---~vv~V 707 (1050)
++++|++.. .+..++|+++++.++.+.|.... ..|.. ++-+|++++.+|-+..+++.+.|+ +++.|
T Consensus 180 ~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~V 259 (539)
T PLN02590 180 AKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLL 259 (539)
T ss_pred HHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEE
Confidence 999999852 24456777778777777775332 22321 233566788899888889999998 59999
Q ss_pred cCCC--CCCCCHHHHHHHHHcC---CCCEEEEEEEcCCC-ccccccCHHHHHHHHHHcCCEEEEeccccccccccC--CC
Q 001579 708 GTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT--SP 779 (1050)
Q Consensus 708 ~~d~--~g~iD~e~L~~~i~~~---~~~taaV~vt~Pn~-~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~--~p 779 (1050)
|+|. ++++|+++|+++|++. +..+.+|+.|..+| +|.|| ||++|+++|+++|+|+|||||. +|+. .|
T Consensus 260 p~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiD-pl~~Ia~i~~~~g~WlHVDaA~----GG~al~~~ 334 (539)
T PLN02590 260 KTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVD-PLVPLGNIAKKYGIWLHVDAAY----AGNACICP 334 (539)
T ss_pred eCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccC-CHHHHHHHHHHhCCeEEEecch----hhhhhcCh
Confidence 9984 5799999999999742 22467788888764 89999 8999999999999999999974 3322 23
Q ss_pred -------CcccCcEEEeCCccccccCCCCCCCcceeeeeccc--cc-------CCCCCCccccCCCCCCCCCCCCCCCCC
Q 001579 780 -------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LA-------PFLPSHPVVSTGGIPAPEKSQPLGTIA 843 (1050)
Q Consensus 780 -------g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~--l~-------~~lpg~~vg~~~~~~~~~~~~~t~~i~ 843 (1050)
|-..+|.++.|.|||+..|+++| ++.+++. +. ++++... ......... +...... +
T Consensus 335 ~~r~~~~Gie~ADSit~D~HK~l~~p~~cg-----~llvr~~~~l~~a~~~~~~YL~~~~-~~~~~~~d~-~d~~i~l-s 406 (539)
T PLN02590 335 EYRKFIDGIENADSFNMNAHKWLFANQTCS-----PLWVKDRYSLIDALKTNPEYLEFKV-SKKDTVVNY-KDWQISL-S 406 (539)
T ss_pred hhHHHhcCCccCCEEEECchhhcCcCcCEE-----EEEecCHHHHHHHhhcCHHHhCCcc-cccccCCCc-cccCCCC-C
Confidence 22358999999999999998875 7778753 22 1221100 000000000 0111111 1
Q ss_pred cchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEeccccccc-C--CC
Q 001579 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNT-A--GI 918 (1050)
Q Consensus 844 sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~-~--g~ 918 (1050)
-...++..|+.++.+|.+|+++..++.+++|+|+.+.|++. |+++.+ +.+..+.|...+-... . ..
T Consensus 407 -----Rr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~----~~l~iVcFr~~~~~~~~~~~~~ 477 (539)
T PLN02590 407 -----RRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT----RYFSLVCFRLAPVDGDEDQCNE 477 (539)
T ss_pred -----CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CceEEEEEEecCCCCCHHHHHH
Confidence 11234678999999999999999999999999999999875 666532 4455566665421000 0 00
Q ss_pred CHHHHHHHHHHCCccc-CCCCCCCCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHH
Q 001579 919 EPEDVAKRLMDYGFHG-PTMSWPVPGTLMIEPTE-SESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 919 ~~~~vakrL~d~Gi~~-~~~~~pv~~~lrI~~te-~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
-..++.++|.+.|... ....+.-...||+++.- .++++|||.+++.|.+...++-
T Consensus 478 ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~ 534 (539)
T PLN02590 478 RNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFT 534 (539)
T ss_pred HHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 1236777777777653 21111112468988854 5678999999999988766653
No 46
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.91 E-value=1.1e-22 Score=238.81 Aligned_cols=335 Identities=21% Similarity=0.240 Sum_probs=237.9
Q ss_pred CCCCCHHHHHHHHHHHhccccCcccc-c--ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHH
Q 001579 565 NKYHTEHELLRYIHLLQSKELSLCHS-M--IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 641 (1050)
Q Consensus 565 ~~~~sE~e~~r~~~~l~~~d~~~~~~-~--i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~l 641 (1050)
+.+..+++++.++..+..+|..+..+ . ...++|.....+....... .+.+-+...+ +++++..++..++..|+
T Consensus 35 ~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~---~~~~~nl~d~-~~~p~a~~~E~~~v~~l 110 (460)
T COG0076 35 EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLV---SALNKNLGDP-DESPAAAELEERVVNML 110 (460)
T ss_pred ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHH---HHHhhcCCCc-ccChhHHHHHHHHHHHH
Confidence 57899999999999998888655332 1 2345555544444333211 2233334444 67789999999999999
Q ss_pred HHhhCCCe--eeeccCchHHHHHHHHHHHHHHHH-hc----C-CCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC-C
Q 001579 642 CTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHK-AR----G-DHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K 712 (1050)
Q Consensus 642 ael~G~d~--~~l~~~sGa~ge~a~Llair~y~~-~~----G-~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~-~ 712 (1050)
++++|.+. ...++.+|+++++-++++.|.... .. + ..+.++||+|.++|.++.+++.+.|++++.|+.++ +
T Consensus 111 ~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~ 190 (460)
T COG0076 111 SDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTD 190 (460)
T ss_pred HHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCc
Confidence 99999953 235566788888766666665432 11 1 11244799999999999999999999999999988 7
Q ss_pred CCCCHHHHHHHHHcCCCCEEE--EEEEcCCC-ccccccCHHHHHHHHHHcCCEEEEeccccccccccCCC-----Ccc--
Q 001579 713 GNINIEELRKAAEANRDNLST--LMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-----GYI-- 782 (1050)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taa--V~vt~Pn~-~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p-----g~~-- 782 (1050)
.++|+++|+++|+ +++.. |+.+.++| +|.+| ||++|+++|+++|+++|||+| +||+..| +.|
T Consensus 191 ~~id~~~l~~~i~---~~t~~g~vV~~aGtT~~G~iD-di~~ia~ia~~~~i~lHVDAA----~GG~~~pf~~~~~~~~f 262 (460)
T COG0076 191 YRIDVDALEEAID---ENTIGGVVVGTAGTTDTGSID-DIEELADIAEEYGIWLHVDAA----FGGFLLPFLEPDGRWDF 262 (460)
T ss_pred cccCHHHHHHHHH---hhccCceEEEEecCCCCCccC-CHHHHHHHHHHcCCcEEEEcc----ccceeecccCccchhhc
Confidence 9999999999998 66776 88888864 89999 899999999999999999987 5555433 232
Q ss_pred ---cCcEEEeCCccccccCCCCCCCcceeeeeccc--ccC-------CCCCCccccCCCCCCCCCCCCCCCCCcchhhhH
Q 001579 783 ---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAP-------FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1050)
Q Consensus 783 ---GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~--l~~-------~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~ 850 (1050)
++|.++.|+||++..|.|+ |.+.+++. +.+ ++|+. ......+.++..|
T Consensus 263 ~l~~vdSIt~d~HK~g~aP~~~-----G~il~rd~e~l~~~~~~~~~yl~~~-------------~~~~~ti~~sr~~-- 322 (460)
T COG0076 263 GLEGVDSITVDGHKYGLAPIGC-----GVVLFRDEEALRRILIFADYYLPGG-------------GIPNFTILGSRPG-- 322 (460)
T ss_pred CCCCceEEEECcccccCCCCCc-----eEEEEECHHHhhhhhhcccccCCCC-------------CcCceeEeeccch--
Confidence 7899999999999887555 57888754 322 22221 0011111112222
Q ss_pred HHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH
Q 001579 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1050)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~ 928 (1050)
..+++.|+.++.+|.+|++++.++++++++|++++|++. ++++.. |..+.+.|..++. .. ...+..+++.
T Consensus 323 ~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~----p~l~~V~fr~~~~---~~-~~~~~~~~~~ 394 (460)
T COG0076 323 RQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNE----PELPIVAFRLKDD---ED-TLADLSERLD 394 (460)
T ss_pred HHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecC----CccceEEEEcCCc---cc-chhchHHHHH
Confidence 256678999999999999999999999999999999985 777532 3444455655321 01 2567778888
Q ss_pred HCCcccCCCCC
Q 001579 929 DYGFHGPTMSW 939 (1050)
Q Consensus 929 d~Gi~~~~~~~ 939 (1050)
..||.++...+
T Consensus 395 ~~gw~v~~~~~ 405 (460)
T COG0076 395 RRGWQVPAQLL 405 (460)
T ss_pred hcCceeecccC
Confidence 89999865433
No 47
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=4.5e-22 Score=230.09 Aligned_cols=346 Identities=15% Similarity=0.183 Sum_probs=236.7
Q ss_pred CCCHHHHHHHHHHHhcCCCccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCC
Q 001579 147 GLTESQMIEHMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1050)
Q Consensus 147 ~~sE~e~~~~~~~la~~n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~ 226 (1050)
+.+|.|++++|++++.++..+.-|+|..+.+ ..|.++ +.+.+ ++.. .+..+...++..+.+.++++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~a~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~la~~~g~ 74 (371)
T PRK13520 1 GLSEEEILEELEEYRSEDLKYERILSSMCTE-PHPIAR-KAHEM---FLET-NLGDPGLFPGTAKLEEEAVEMLGELLHL 74 (371)
T ss_pred CCCHHHHHHHHHHHHhcCCCHHHeeeeeecC-chHHHH-HHHHH---HHhc-CCCCcccCccHHHHHHHHHHHHHHHhCC
Confidence 3689999999999999998877787776533 344443 23321 1111 1112222346777788999999999999
Q ss_pred CCcceeEecchHHHHHHHHHHhh-hhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cCC
Q 001579 227 PMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG 296 (1050)
Q Consensus 227 ~~anasl~d~~Taa~eA~~la~~-~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~ 296 (1050)
+..++.++++||.+.++++.+.+ ...+++++|++++..|+++.+.++ ..|++++.++. +++++ +++
T Consensus 75 ~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 150 (371)
T PRK13520 75 PDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAAD----MLGVELRRAPLDDDYRVDVKAVEDLIDD 150 (371)
T ss_pred CCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHH----HcCceEEEecCCCCCcCCHHHHHHHHhh
Confidence 88788888999977766654432 111257899999999999777653 45778777653 45666 777
Q ss_pred CeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC---CC-----CCcccceEEEecCccccccCCCCC
Q 001579 297 DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---KP-----PGELGADIVVGSAQRFGVPMGYGG 367 (1050)
Q Consensus 297 ~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l---~~-----pg~~GaDivvgs~k~~g~P~~~GG 367 (1050)
++++|++.++ |.+|.+.|+++|+++||++|++++|+. .++.+.+ .. ...+|+|.+.+++++|+.+ |+
T Consensus 151 ~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~-a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a---~~ 226 (371)
T PRK13520 151 NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDA-AFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLA---PI 226 (371)
T ss_pred CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEe-cchhHHHHhhcCCCCccccCCCCceEEECCccccCc---cC
Confidence 7877776665 679999999999999999999999943 2332221 11 1246899999998667531 23
Q ss_pred cceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHH
Q 001579 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1050)
Q Consensus 368 P~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia 447 (1050)
|.+++++.++++.+.+... .+ |... .. + .-..||.+. ....++.++ +..++.+|++++.
T Consensus 227 ~~G~~~~~~~~~~~~l~~~----------~~-~~~~--~~-~--~~~~gt~~~---~~~~~~~~a--l~~l~~~g~~~~~ 285 (371)
T PRK13520 227 PAGGILFRDESYLDALAVD----------TP-YLTS--KK-Q--ATLTGTRSG---AGVAATYAV--MKYLGREGYRKVV 285 (371)
T ss_pred CceEEEEcCHHHHHhhccc----------Cc-cccC--CC-C--cceEeeccC---hHHHHHHHH--HhhhcHhHHHHHH
Confidence 4445555566676665310 00 1000 00 0 001244443 223333333 3567888999999
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCCHHHHHHHHHHcCceeeeec-CCeEEEEeccCCCHHHHHHHHHH
Q 001579 448 QRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKLFIV 526 (1050)
Q Consensus 448 ~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~i~~~L~~~GI~~~~~~-~~~lris~~e~~t~edId~lv~~ 526 (1050)
+++.+++++|+++|+++| ++++..+..+.+.+..+.+.++.++|.++||.++... +..+|+|++.++|++|||+|+++
T Consensus 286 ~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~ 364 (371)
T PRK13520 286 ERCMENTRWLAEELKERG-FEPVIEPVLNIVAFDDPNPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLED 364 (371)
T ss_pred HHHHHHHHHHHHHHHhCC-CEEecCCCceEEEEecCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHH
Confidence 999999999999999997 8844333344566766667899999999999887643 56799999999999999999999
Q ss_pred Hh
Q 001579 527 FA 528 (1050)
Q Consensus 527 l~ 528 (1050)
|+
T Consensus 365 l~ 366 (371)
T PRK13520 365 LK 366 (371)
T ss_pred HH
Confidence 86
No 48
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.91 E-value=8.6e-22 Score=228.30 Aligned_cols=301 Identities=15% Similarity=0.158 Sum_probs=220.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCc-ceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEE
Q 001579 207 QGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1050)
Q Consensus 207 qG~le~l~e~q~~ia~L~G~~~a-nasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1050)
++..+.+.++++.+++++|++.. ++.++.++|.++..++.+. + ++|++|+++...|+++...+...++..|++++.
T Consensus 40 ~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~-~--~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 116 (376)
T TIGR01977 40 LRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGL-L--KEGDHVITTPMEHNSVARPLECLKEQIGVEITI 116 (376)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhc-c--CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEE
Confidence 34457788899999999999764 7888889997777665553 2 278999999999999998887767777888887
Q ss_pred cCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEe
Q 001579 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (1050)
Q Consensus 286 ~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvg 354 (1050)
++. +++++ +++++++|++++| |.+|.+.|+++|+++||++|++++|+ ..+++|.+. ...++|+|++++
T Consensus 117 v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD-~a~~~g~~~~~~~~~~~D~~~~ 195 (376)
T TIGR01977 117 VKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILD-AAQTAGVIPIDMTELAIDMLAF 195 (376)
T ss_pred EecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEE-hhhccCccCCCchhcCCCEEEe
Confidence 754 34555 6778999999987 67999999999999999999999994 345666543 335689999999
Q ss_pred cC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH
Q 001579 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1050)
Q Consensus 355 s~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~ 433 (1050)
++ |++++|. +.|+++++++. .+.....|+.. .+.+.+.. .+...-|.+.+|.|+ ..+.++.+++
T Consensus 196 s~~K~l~~p~-----g~g~l~~~~~~--~~~~~~~~~~~----~~~~~~~~-~~~~~~r~~~~t~~~---~~~~a~~~al 260 (376)
T TIGR01977 196 TGHKGLLGPQ-----GTGGLYIREGI--KLKPLKSGGTG----SHSALIDQ-PSELPDRFESGTLNT---PGIAGLNAGI 260 (376)
T ss_pred cccccccCCC-----CceEEEEcCCc--CcCceecCCCc----cccccccc-cccchhhccCCCCCH---HHHHHHHHHH
Confidence 99 6665543 46778888764 12222222100 00011110 111123567788887 4455555555
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--C--CccEEEEecCC--HHHHHHHHHHc-Cceeeee----
Q 001579 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--P--FFDTVKVKCAD--AHAIASAAYKI-EMNLRVV---- 502 (1050)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~--~--~~~~v~i~~~~--~~~i~~~L~~~-GI~~~~~---- 502 (1050)
.++...|++++.+|+++++++++++|.++++++++.+ + ....+.|..++ ..++.+.|.++ ||.++.-
T Consensus 261 --~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~ 338 (376)
T TIGR01977 261 --KFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCA 338 (376)
T ss_pred --HHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccc
Confidence 6777889999999999999999999998755888753 1 23356666665 78899999987 9887431
Q ss_pred ----------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 503 ----------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 503 ----------~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
..+.+|+|++.++|.+||++++++|+
T Consensus 339 ~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~ 374 (376)
T TIGR01977 339 PLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALS 374 (376)
T ss_pred hHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHh
Confidence 24789999999999999999999985
No 49
>PLN02880 tyrosine decarboxylase
Probab=99.91 E-value=3.7e-22 Score=237.82 Aligned_cols=386 Identities=14% Similarity=0.083 Sum_probs=246.1
Q ss_pred CCCCCHHHHHHHHHHHhccccCccccccccccc--ccCcchh-hhhccccccccccCCCCCchhhcccHHHHHHHHHHHH
Q 001579 565 NKYHTEHELLRYIHLLQSKELSLCHSMIPLGSC--TMKLNAT-TEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWL 641 (1050)
Q Consensus 565 ~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~--t~~~~~~-~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~l 641 (1050)
+++.+-+++++.+.+.-.......++.-++|+. ..-..+. .+++...+.. +...| +.+++..+++.++.+|+
T Consensus 57 ~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~~~n~--~~~~~---~~sp~~~~lE~~vi~wl 131 (490)
T PLN02880 57 NQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNI--VGFSW---ITSPAATELEMIVLDWL 131 (490)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHHhhcc--CCccc---ccCcccHHHHHHHHHHH
Confidence 466788899999987554443322334445542 1111111 2222111110 01122 45667889999999999
Q ss_pred HHhhCCCee--------eeccCchHHHHHHHHHHHHHHHH-hcCCC--CCCEEEEcCCCCCccHHHHHhCCCE---EEEE
Q 001579 642 CTITGFDSF--------SLQPNAGAAGEYAGLMVIRAYHK-ARGDH--HRNVCIIPVSAHGTNPATAAMCGMK---IVSV 707 (1050)
Q Consensus 642 ael~G~d~~--------~l~~~sGa~ge~a~Llair~y~~-~~G~~--~r~~Vlip~saHgt~pa~a~~~G~~---vv~V 707 (1050)
++++|++.. .+..++|+++++.+|++.|.+.. ..|.. ++-+|++++.+|.+..+++.+.|+. ++.|
T Consensus 132 ~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~V 211 (490)
T PLN02880 132 AKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLL 211 (490)
T ss_pred HHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEe
Confidence 999999852 24456778888777777775432 22221 2345667988999999999999994 8899
Q ss_pred cCCC--CCCCCHHHHHHHHHcC---CCCEEEEEEEcCCC-ccccccCHHHHHHHHHHcCCEEEEeccccccccccCC---
Q 001579 708 GTDA--KGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS--- 778 (1050)
Q Consensus 708 ~~d~--~g~iD~e~L~~~i~~~---~~~taaV~vt~Pn~-~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~--- 778 (1050)
|+|+ ++++|+++|+++|++. +..+.+|+.|..+| +|.++ |+++|+++|+++|+++|||||+..+. +..
T Consensus 212 p~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiD-pl~eI~~i~~~~~iwlHVDaA~gg~~--~~~~~~ 288 (490)
T PLN02880 212 KTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVD-PLLELGKIAKSNGMWFHVDAAYAGSA--CICPEY 288 (490)
T ss_pred ecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccC-cHHHHHHHHHHcCCEEEEehhhHHHH--HhCHHH
Confidence 9975 5799999999999742 23467788888764 89999 89999999999999999999853221 112
Q ss_pred ----CCcccCcEEEeCCccccccCCCCCCCcceeeeeccc--ccCCCCCC--cccc-CCCC-CCCC-CCCCCCCCCcchh
Q 001579 779 ----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFLPSH--PVVS-TGGI-PAPE-KSQPLGTIAAAPW 847 (1050)
Q Consensus 779 ----pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~--l~~~lpg~--~vg~-~~~~-~~~~-~~~~t~~i~sa~~ 847 (1050)
.|-.++|.++.|+|||++.|+++ |++.+++. +...+... +... ..+. .... ...... ++
T Consensus 289 ~~~l~gie~aDSit~d~HKwl~~P~~~-----g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~--~~--- 358 (490)
T PLN02880 289 RHYIDGVEEADSFNMNAHKWFLTNFDC-----SLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIP--LG--- 358 (490)
T ss_pred HHHhcCchhcCEEEECchhhcCCCccE-----EEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcC--CC---
Confidence 23357899999999999988776 58888752 21111000 0000 0000 0000 000000 11
Q ss_pred hhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCH----H
Q 001579 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEP----E 921 (1050)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~----~ 921 (1050)
.-..+...|+.++.+|.+|+++..++.+++++|+.+.|++. ++++.+ +....+.|.+++... ..... .
T Consensus 359 -rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~----~~~~iv~Fr~~~~~~-~~~~~~~~n~ 432 (490)
T PLN02880 359 -RRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP----RIFSLVCFRLVPPKN-NEDNGNKLNH 432 (490)
T ss_pred -CcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC----CceEEEEEEEeCCCC-ChhhHHHHHH
Confidence 11223567999999999999999999999999999999875 555421 344455666543110 00011 3
Q ss_pred HHHHHHHHCCcc-cCCCCCCCCCEEEEEcCCCCC-HHHHHHHHHHHHHHHHHHHH
Q 001579 922 DVAKRLMDYGFH-GPTMSWPVPGTLMIEPTESES-KEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 922 ~vakrL~d~Gi~-~~~~~~pv~~~lrI~~te~~t-~eeid~fv~aL~~i~~ei~~ 974 (1050)
++.++|.+.|.. +....+.-...+|+++.-..| .+|+|++++.|.++.+++.+
T Consensus 433 ~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 433 DLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred HHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 466666655543 332222223579999886555 69999999999999887644
No 50
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=2.4e-22 Score=230.01 Aligned_cols=294 Identities=18% Similarity=0.218 Sum_probs=210.2
Q ss_pred hhcccHHHHHHHHHHHHHHhhCCC---eeeeccCchHHHHHHHHHHHHHHHHh----c--CCCCCCEEEEcCCCCCccHH
Q 001579 625 DQAQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKA----R--GDHHRNVCIIPVSAHGTNPA 695 (1050)
Q Consensus 625 e~~~G~~~~i~el~~~lael~G~d---~~~l~~~sGa~ge~a~Llair~y~~~----~--G~~~r~~Vlip~saHgt~pa 695 (1050)
+.+++..++.+++.+++++++|.+ ...+++++|++|+..++.+++..... . +.+++.+|+++...|.++..
T Consensus 31 ~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~ 110 (345)
T cd06450 31 DESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEK 110 (345)
T ss_pred ccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHH
Confidence 346688899999999999999986 22356677887776666555432110 0 01124578889989988877
Q ss_pred HHHhCCCEEEEEcCCCCCCCCHHHHHHHHHc---CCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccc
Q 001579 696 TAAMCGMKIVSVGTDAKGNINIEELRKAAEA---NRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMN 771 (1050)
Q Consensus 696 ~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~---~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~ 771 (1050)
.+...|.+++.+++++++.+|+++|++++++ ++.++++|++++|+ .+|.++ ++++|+++|+++|+++|+|+|+..
T Consensus 111 ~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~l~vD~a~~~ 189 (345)
T cd06450 111 AAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAID-PLEEIADLAEKYDLWLHVDAAYGG 189 (345)
T ss_pred HHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCC-CHHHHHHHHHHhCCeEEEechhhH
Confidence 7888899999999988899999999999974 12278888889985 589998 899999999999999999998643
Q ss_pred cccccCCCC-----cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcch
Q 001579 772 AQVGLTSPG-----YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (1050)
Q Consensus 772 al~gl~~pg-----~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~ 846 (1050)
....+.... ..++|++.+++||+++.| +|.|+++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p-----~g~g~~~~~---------------------------------- 230 (345)
T cd06450 190 FLLPFPEPRHLDFGIERVDSISVDPHKYGLVP-----LGCSAVLVR---------------------------------- 230 (345)
T ss_pred HHhhChhhHHHhcCccccCEEEEchhHhhCCC-----cchHHHHHH----------------------------------
Confidence 332211111 137899999999998644 345555443
Q ss_pred hhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHH
Q 001579 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1050)
Q Consensus 847 ~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakr 926 (1050)
+...|+.+..++.+|+++..++..++++++.++|+++..+...++ +..+.+.|.+.+- ...+++..++.++
T Consensus 231 ------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~iv~f~~~~~-~~~~~~~~~i~~~ 301 (345)
T cd06450 231 ------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGE--PNLSLVCFRLKPS-VKLDELNYDLSDR 301 (345)
T ss_pred ------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CceeEEEEEECCc-chhhHHHHHHHHH
Confidence 223567788889999999999999999999999988632211121 1223344544310 0012456789999
Q ss_pred HHHCC-cccCCCCCCCCCEEEEEcCCCC-CHHHHHHHHHHHHH
Q 001579 927 LMDYG-FHGPTMSWPVPGTLMIEPTESE-SKEELDRYCDALIS 967 (1050)
Q Consensus 927 L~d~G-i~~~~~~~pv~~~lrI~~te~~-t~eeid~fv~aL~~ 967 (1050)
|.++| ++++...++..+.+|++++..+ |++|+|+|+++|++
T Consensus 302 L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 302 LNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 99985 5554333333578999999864 99999999999875
No 51
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.90 E-value=3.6e-21 Score=225.47 Aligned_cols=313 Identities=17% Similarity=0.160 Sum_probs=212.1
Q ss_pred HHHHHHHHHHHHHhhCCC-ee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEE
Q 001579 631 QEMFNNLGEWLCTITGFD-SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKI 704 (1050)
Q Consensus 631 ~~~i~el~~~lael~G~d-~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~v 704 (1050)
.+.+.++++.+++++|.+ .. .+..+++++|...++.++. .. ...++++||+++..|.++.. .++..|+++
T Consensus 61 ~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~---~~-~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~ 136 (403)
T TIGR01979 61 TEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWG---DS-NLKAGDEIVISEMEHHANIVPWQLLAERTGATL 136 (403)
T ss_pred HHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhh---hh-cCCCCCEEEECcchhhHHHHHHHHHHHhcCcEE
Confidence 356789999999999987 32 2344455544433322221 11 11246789999888876432 245789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCccc
Q 001579 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~G 783 (1050)
+.++++++|.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+... ....+++
T Consensus 137 ~~v~~~~~~~~~~~~l~~~i~---~~~~lv~~~~~~~~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~g~~~-~~~~~~~ 211 (403)
T TIGR01979 137 KFIPLDDDGTLDLDDLEKLLT---EKTKLVAITHVSNVLGTVN-PVEEIAKLAHQVGAKVLVDGAQAVPHMP-VDVQALD 211 (403)
T ss_pred EEEecCCCCCCCHHHHHHHhc---cCCeEEEEEcccccccccC-CHHHHHHHHHHcCCEEEEEchhhcCccc-cCccccC
Confidence 999999889999999999997 789999999984 689998 7999999999999999999987433221 1224578
Q ss_pred CcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCC-CC-------CCC---CCCCCCCCCCcchhhhHHH
Q 001579 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GI-------PAP---EKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 784 aDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~-~~-------~~~---~~~~~t~~i~sa~~g~~~~ 852 (1050)
.|++++++||+|+ .+|+|++++++++.+.++....+... +. ... ..+.++.+ ...
T Consensus 212 ~d~~~~s~~K~~g------p~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~--------~~~ 277 (403)
T TIGR01979 212 CDFYVFSGHKMYG------PTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPN--------IAG 277 (403)
T ss_pred CCEEEEecccccC------CCCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCcc--------HHH
Confidence 9999999999763 35689999998876666432222110 00 000 00011111 122
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHC
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~ 930 (1050)
+...++.+..+...|+.+..++...+++++.++|+++ +++..+.......+.+.|.++ +++..++.+.|.++
T Consensus 278 ~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~------~~~~~~~~~~L~~~ 351 (403)
T TIGR01979 278 VIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVE------GVHPHDVGTILDEE 351 (403)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeC------CcCHHHHHHHHhhC
Confidence 2334555566666677788888889999999999875 333211111112233445543 35678899999999
Q ss_pred CcccCCCC---------CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 931 GFHGPTMS---------WPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 931 Gi~~~~~~---------~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
||.+.... +..++.+||+++.++|++|+|+|+++|+++++++
T Consensus 352 gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 352 GIAVRSGHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CEEEcchhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 99875321 2235789999999999999999999999887754
No 52
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.90 E-value=3.2e-21 Score=226.23 Aligned_cols=311 Identities=17% Similarity=0.168 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHHhhCC-Ceee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhCCCE
Q 001579 630 YQEMFNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~-d~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~p----a~a~~~G~~ 703 (1050)
..+.+.++++.+++++|. +... +..+++++|...+ ++.+... ...++++||++...|.++. ..++..|++
T Consensus 65 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~---~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~ 140 (406)
T PRK09295 65 ATEKMENVRKQAALFINARSAEELVFVRGTTEGINLV---ANSWGNS-NVRAGDNIIISEMEHHANIVPWQMLCARVGAE 140 (406)
T ss_pred HHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHH---HHHhhhh-cCCCcCEEEECcchhhHHHHHHHHHHHHcCcE
Confidence 457788999999999997 4322 3344445544332 3322111 1124678999988775542 225678999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc
Q 001579 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1050)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~ 782 (1050)
++.++.+++|.+|+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++..+...+ ...++
T Consensus 141 v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~l~~~~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~g~~~~-~~~~~ 215 (406)
T PRK09295 141 LRVIPLNPDGTLQLETLPALFD---ERTRLLAITHVSNVLGTEN-PLAEMIALAHQHGAKVLVDGAQAVMHHPV-DVQAL 215 (406)
T ss_pred EEEEecCCCCCCCHHHHHHhcC---CCcEEEEEecchhcccccC-CHHHHHHHHHHcCCEEEEEcccccCcccc-Cchhc
Confidence 9999998889999999999997 78999999999 5799998 79999999999999999999875433222 22467
Q ss_pred cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCC-------CC--CC---CCCCCCCCCCCcchhhhH
Q 001579 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-------GI--PA---PEKSQPLGTIAAAPWGSA 850 (1050)
Q Consensus 783 GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~-------~~--~~---~~~~~~t~~i~sa~~g~~ 850 (1050)
|+|++++++||.+ |.+|+|++++++++.+.++....|... .. .. .+.+.+|.++.
T Consensus 216 ~~D~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~------- 282 (406)
T PRK09295 216 DCDFYVFSGHKLY------GPTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTG------- 282 (406)
T ss_pred CCCEEEeehhhcc------CCCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHH-------
Confidence 9999999999954 334789999998877766643322211 00 00 01122222221
Q ss_pred HHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHC
Q 001579 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1050)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~ 930 (1050)
.+....+.+.++.+.|+.++.++...+++++.++|+++..+...++. ...+.+.|.++ +.+.+++.+.|.++
T Consensus 283 -~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~-~~~~iv~~~~~------~~~~~~~~~~L~~~ 354 (406)
T PRK09295 283 -GIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ-NRLGVIAFNLG------KHHAYDVGSFLDNY 354 (406)
T ss_pred -HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-CCceEEEEEEC------CcCHHHHHHHHHhC
Confidence 22234455566666677777777888899999999876333211221 11233444443 35678999999999
Q ss_pred CcccCCCC---------CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 931 GFHGPTMS---------WPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 931 Gi~~~~~~---------~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
||.+.+-. +..++.+|++++.++|++|||+|+++|+++..
T Consensus 355 gI~v~~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 355 GIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CeEEeccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 99875321 11347899999999999999999999998754
No 53
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=3.4e-22 Score=228.24 Aligned_cols=315 Identities=18% Similarity=0.215 Sum_probs=241.1
Q ss_pred CCccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHH
Q 001579 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1050)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA 243 (1050)
|-+.++|+|+..+|..+.+++. .+.+ |.+..+ .++...|+.+.+.++++.+|+++|.|. +.+|.+|-.+..+
T Consensus 43 nf~SNdYLGLa~~~~~~~a~~~-~~~~---~g~g~~--gsR~i~G~~~~h~~LE~~lA~f~g~e~--al~f~SGy~AN~~ 114 (388)
T COG0156 43 NFCSNDYLGLASHPELIEAAKA-AIRR---YGVGAG--GSRLISGTSDLHVELEEELADFLGAEA--ALLFSSGFVANLG 114 (388)
T ss_pred eeeccCcccccCCHHHHHHHHH-HHHH---hCCCCC--CcCcccCCcHHHHHHHHHHHHHhCCCc--EEEEcccchhHHH
Confidence 4567889999999988888875 4443 334333 778889999999999999999999997 7888999888888
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhhc-cCC---C--eeEEEEEcC--CCCeeEccH
Q 001579 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KSG---D--VCGVLVQYP--GTEGEVLDY 315 (1050)
Q Consensus 244 ~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~-l~~---~--t~~V~v~~p--n~~G~i~di 315 (1050)
++-++. +++|.|+.++.+|.|.++.++ +.+..-+.+.+.|+++|++ +.+ . .+.++|+.. ++.|++.|+
T Consensus 115 ~i~~l~---~~~dli~~D~lnHASiidG~r-ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL 190 (388)
T COG0156 115 LLSALL---KKGDLIFSDELNHASIIDGIR-LSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL 190 (388)
T ss_pred HHHHhc---CCCcEEEEechhhhhHHHHHH-hCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence 776653 268999999999999999997 3555667788889988887 432 1 245566654 899999999
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCCCCCC-----ccc-----ceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCC
Q 001579 316 GDFIKNAHANGVKVVMATDLLALTILKPPG-----ELG-----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1050)
Q Consensus 316 ~~I~~~ah~~galliV~a~~~alg~l~~pg-----~~G-----aDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lp 384 (1050)
++|++++++||++++| ++.++.|++.+-| .+| +||++|+. |.||. .| ||+.++..+++.+
T Consensus 191 ~~l~~L~~ky~a~L~V-DEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs---~G----g~v~g~~~~~d~L- 261 (388)
T COG0156 191 PELVELAEKYGALLYV-DEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS---SG----GYIAGSAALIDYL- 261 (388)
T ss_pred HHHHHHHHHhCcEEEE-EccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc---cC----ceeeCcHHHHHHH-
Confidence 9999999999999999 5788999887654 244 38999997 99983 44 5888888777655
Q ss_pred CcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001579 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1050)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1050)
|.++.+.|+|++..++.+++...++.--+-..+..+++.+++.++++.++..
T Consensus 262 ----------------------------~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~ 313 (388)
T COG0156 262 ----------------------------RNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313 (388)
T ss_pred ----------------------------HHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 2346677777777777766664433333334567788899999999888777
Q ss_pred CCEEEcC-CCCccEEEEecCC-HHHHHHHHHHcCceeeeec-------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 465 GTVEVQG-LPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 465 G~~~l~~-~~~~~~v~i~~~~-~~~i~~~L~~~GI~~~~~~-------~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
| +.+.. ...+-++.+..+. +.++...|.++||++..+. ...+|+|++..+|++||++++++|.
T Consensus 314 ~-~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~ 385 (388)
T COG0156 314 G-LVLLPSESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALS 385 (388)
T ss_pred C-CccCCCCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHH
Confidence 7 66532 2333345555544 8899999999999986542 2679999999999999999999986
No 54
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.89 E-value=5.2e-21 Score=223.87 Aligned_cols=312 Identities=16% Similarity=0.127 Sum_probs=209.9
Q ss_pred HHHHHHHHHHHHHHhhCCC-eee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhCCCE
Q 001579 630 YQEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMK 703 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d-~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~p----a~a~~~G~~ 703 (1050)
..+.+.++++.+++++|.+ ... +..+++++|...++ +.+.. +...++++||+++..|.++. ..++..|++
T Consensus 58 ~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~---~~~~~-~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~ 133 (398)
T TIGR03392 58 LTARYELARQQVARFLNAPDAENIVWTRGTTESINLVA---QSYAR-PRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAK 133 (398)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHH---HHhhh-ccCCCCCEEEECCcchhHHHHHHHHHHHHcCcE
Confidence 4467889999999999985 323 34455555553333 33211 01124678999988876642 235778999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc
Q 001579 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1050)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~ 782 (1050)
++.++++.++.+|+++|+++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++
T Consensus 134 v~~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~~~-~~~~~ 208 (398)
T TIGR03392 134 VVKLPIGADLLPDIRQLPELLT---PRTRILALGQMSNVTGGCP-DLARAITLAHQYGAVVVVDGAQGVVHGPP-DVQAL 208 (398)
T ss_pred EEEEecCCCCCcCHHHHHHHhc---cCceEEEEECccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCCCC-Chhhc
Confidence 9999998888999999999997 789999999984 789998 89999999999999999999874322211 12356
Q ss_pred cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCC----C--CCC-----CCCCCCCCCCCcchhhhHH
Q 001579 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----G--IPA-----PEKSQPLGTIAAAPWGSAL 851 (1050)
Q Consensus 783 GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~----~--~~~-----~~~~~~t~~i~sa~~g~~~ 851 (1050)
++|+.++++||.| |.+|+|++++++++.+.++....+... + ... .+.+.+|.++. .
T Consensus 209 ~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~-----~-- 275 (398)
T TIGR03392 209 DIDFYAFSGHKLY------GPTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIA-----G-- 275 (398)
T ss_pred CCCEEEEeccccc------CCCceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHH-----H--
Confidence 8999999999965 334689999998877666432211110 0 000 00112222221 1
Q ss_pred HHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCC
Q 001579 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1050)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~G 931 (1050)
.....+.+..+...|+.++.++...+++++.+.|+++..+...++.. ...+.|.++ +++.+++.++|.++|
T Consensus 276 -~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~--~~i~~~~~~------~~~~~~l~~~L~~~g 346 (398)
T TIGR03392 276 -VIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPG--SSLLAFDFA------GVHHSDLAALLAESG 346 (398)
T ss_pred -HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC--CcEEEEEeC------CcCHHHHHHHHHhCC
Confidence 12233444444455777777777788999999998753332112111 112334432 466789999999999
Q ss_pred cccCCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 932 FHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 932 i~~~~~~~---------pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
|.+..... ...+.+||+++.++|++|+|+|+++|+++++.+
T Consensus 347 I~v~~g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 347 IALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred EEEecCccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 98754321 124789999999999999999999999987653
No 55
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.89 E-value=5.9e-21 Score=221.14 Aligned_cols=308 Identities=20% Similarity=0.203 Sum_probs=209.4
Q ss_pred cHHHHHHHHHHHHHHhhCCC-eee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhCCC
Q 001579 629 GYQEMFNNLGEWLCTITGFD-SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGM 702 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d-~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~p----a~a~~~G~ 702 (1050)
...+.+.++++.+++++|.+ ... +..+++++|... ++++.... ..++++||++...|+++. ..++..|+
T Consensus 40 ~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~---~~~~l~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~ 114 (373)
T cd06453 40 RATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINL---VAYGLGRA--NKPGDEIVTSVMEHHSNIVPWQQLAERTGA 114 (373)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHH---HHHHhhhc--CCCCCEEEECcchhHHHHHHHHHHHhhcCc
Confidence 34567888999999999988 333 344555555433 33333221 014578999888776542 12457899
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCc
Q 001579 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1050)
Q Consensus 703 ~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~ 781 (1050)
+++.|+++.++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|.++|+++|+++++|+++..+...+ ...+
T Consensus 115 ~~~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~li~D~a~~~~~~~~-~~~~ 189 (373)
T cd06453 115 KLKVVPVDDDGQLDLEALEKLLT---ERTKLVAVTHVSNVLGTIN-PVKEIGEIAHEAGVPVLVDGAQSAGHMPV-DVQD 189 (373)
T ss_pred EEEEeecCCCCCcCHHHHHHHhc---CCceEEEEeCcccccCCcC-CHHHHHHHHHHcCCEEEEEhhhhcCceee-eccc
Confidence 99999998889999999999997 689999999985 689998 79999999999999999999864222111 2245
Q ss_pred ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCC-CC-----CCC--CCCCCCCCCCcchhhhHHHH
Q 001579 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GI-----PAP--EKSQPLGTIAAAPWGSALIL 853 (1050)
Q Consensus 782 ~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~-~~-----~~~--~~~~~t~~i~sa~~g~~~~~ 853 (1050)
+|+|++++++||+|+ ++|+|++++++++.+.+.....+... +. ... ...+... .+ + +...+
T Consensus 190 ~~~d~~~~s~~K~~~------~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~t-~--~~~~~ 258 (373)
T cd06453 190 LGCDFLAFSGHKMLG------PTGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEA--GT-P--NIAGA 258 (373)
T ss_pred cCCCEEEeccccccC------CCCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCC--CC-C--CHHHH
Confidence 799999999999984 37889999998776655422211110 00 000 0000000 01 1 11223
Q ss_pred HHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCC
Q 001579 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1050)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~G 931 (1050)
...++.+..+..+|+++..++...+++|+.+.|+++ +++.. . .....+.+.|.+. +.+..++.++|.++|
T Consensus 259 ~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~-~~~~~~~~~~~~~------~~~~~~i~~~l~~~g 330 (373)
T cd06453 259 IGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG-D-AEDRAGVVSFNLE------GIHPHDVATILDQYG 330 (373)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-C-ccccCCeEEEEEC------CcCHHHHHHHHHHCC
Confidence 345666777888889888888889999999999875 33331 1 1112233445543 356789999999999
Q ss_pred cccCCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHH
Q 001579 932 FHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 932 i~~~~~~~---------pv~~~lrI~~te~~t~eeid~fv~aL 965 (1050)
|.+..... ...+++||+++..+|.+|||+|+++|
T Consensus 331 i~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 331 IAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 98753221 13578999999999999999999875
No 56
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.89 E-value=8.1e-22 Score=227.59 Aligned_cols=316 Identities=20% Similarity=0.262 Sum_probs=203.4
Q ss_pred CCcccCCCCCHHHHHHHHHHHhccccCcccccccccccccCcchh---hhhccccccccccCCCCCchhhcccHHHHHHH
Q 001579 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNAT---TEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1050)
Q Consensus 560 ~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~---~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~e 636 (1050)
.+| .++.+.+++++.+++.........++..++|.-+...+.. .+++ ..+.+-+.+.. +.++...+++.+
T Consensus 11 ~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l----~~~~n~n~~~~-~~~P~~~~~E~~ 83 (373)
T PF00282_consen 11 ELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLL----ASALNQNGFTW-EASPAATEIERE 83 (373)
T ss_dssp CHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHH----HHHHT-BTTST-TTSHHHHHHHHH
T ss_pred ccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHH----Hhhhccccccc-ccccccccchHH
Confidence 445 4667999999999877655544333344555422111111 1111 11222222333 556778899999
Q ss_pred HHHHHHHhhCCC--------eeeeccCchHHHHHHHHHHHHHHHH----hcCC--CCCCEEEEcCCCCCccHHHHHhCCC
Q 001579 637 LGEWLCTITGFD--------SFSLQPNAGAAGEYAGLMVIRAYHK----ARGD--HHRNVCIIPVSAHGTNPATAAMCGM 702 (1050)
Q Consensus 637 l~~~lael~G~d--------~~~l~~~sGa~ge~a~Llair~y~~----~~G~--~~r~~Vlip~saHgt~pa~a~~~G~ 702 (1050)
+.+|+++++|++ ...+..++|+.+++.++++.|.+.. ..|. ..+.+|++++.+|-+...++.+.|+
T Consensus 84 vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGl 163 (373)
T PF00282_consen 84 VIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGL 163 (373)
T ss_dssp HHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTS
T ss_pred HHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeee
Confidence 999999999999 2345667888888878777775432 2232 1345788899999999999999999
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCC---EEEEEEEcCCC-ccccccCHHHHHHHHHHcCCEEEEeccccccccccCC
Q 001579 703 KIVSVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS 778 (1050)
Q Consensus 703 ~vv~V~~d~~g~iD~e~L~~~i~~~~~~---taaV~vt~Pn~-~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~ 778 (1050)
.++.||+|++|++|+++|+++|++...+ ..+|+.+..+| +|.+| ||++|+++|+++++++|||+|..-+. +..
T Consensus 164 g~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D-~l~~i~~i~~~~~~wlHVDaA~gg~~--~~~ 240 (373)
T PF00282_consen 164 GVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAID-PLEEIADICEKYNIWLHVDAAYGGSA--LLS 240 (373)
T ss_dssp EEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB--SHHHHHHHHHHCT-EEEEEETTGGGG--GGH
T ss_pred EEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCccccccc-CHHHHhhhccccceeeeecccccccc--ccc
Confidence 9999999999999999999999753222 44677788764 89998 89999999999999999998743211 222
Q ss_pred C-------CcccCcEEEeCCccccccCCCCCCCcceeeeeccc--ccCCC--CCCccccCCCCCCCCCCCCCCCCCcchh
Q 001579 779 P-------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPFL--PSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1050)
Q Consensus 779 p-------g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~--l~~~l--pg~~vg~~~~~~~~~~~~~t~~i~sa~~ 847 (1050)
| |-.++|.++.|.||++..|+++| ++.+++. +...+ ...+.+................+..+.
T Consensus 241 ~~~~~~~~gi~~adSit~d~HK~l~~P~~~~-----~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR- 314 (373)
T PF00282_consen 241 PEYRHLLFGIERADSITIDPHKWLGVPYGCG-----VLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR- 314 (373)
T ss_dssp CTTGGGGTTGGGESEEEEETTTTTS-SSS-E-----EEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-
T ss_pred ccccccccccccccccccchhhhhcCCccce-----eEEeecccchHHHhccChhhhcccccccccccccccccccccc-
Confidence 2 23468999999999999987764 7777753 22211 111111000000000000111222222
Q ss_pred hhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCee
Q 001579 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPIL 893 (1050)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~ 893 (1050)
...++..|+.++.+|.+|+++..++.+++++|++++|++. ++++
T Consensus 315 --~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~ 360 (373)
T PF00282_consen 315 --RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELV 360 (373)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred --cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 3445678999999999999999999999999999999986 4443
No 57
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.89 E-value=1e-20 Score=221.57 Aligned_cols=312 Identities=15% Similarity=0.120 Sum_probs=210.7
Q ss_pred cHHHHHHHHHHHHHHhhCC-Ceee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhCCC
Q 001579 629 GYQEMFNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGM 702 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~-d~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~p----a~a~~~G~ 702 (1050)
...+.++++++.+++++|. +... +..+++++|...+ ++.+.. +...++++||+++..|.++. ..++..|+
T Consensus 60 ~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~---~~~~~~-~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 135 (401)
T PRK10874 60 RLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLV---AQSYAR-PRLQPGDEIIVSEAEHHANLVPWLMVAQQTGA 135 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHH---HHHhhh-ccCCCcCEEEECCcchHHHHHHHHHHHHHhCC
Confidence 3567788999999999998 4433 3445556555333 333311 01124678999988776542 22567899
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCc
Q 001579 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1050)
Q Consensus 703 ~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~ 781 (1050)
+++.++.+.++.+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ....
T Consensus 136 ~v~~v~~~~~~~~d~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~i~~l~~~~g~~~ivD~a~~~g~~~~-~~~~ 210 (401)
T PRK10874 136 KVVKLPLGADRLPDVDLLPELIT---PRTRILALGQMSNVTGGCP-DLARAITLAHQAGMVVMVDGAQGAVHFPA-DVQA 210 (401)
T ss_pred EEEEEecCCCCcCCHHHHHHhcC---cCcEEEEEeCCcccccCcC-CHHHHHHHHHHcCCEEEEECCcccccccC-Cchh
Confidence 99999998889999999999996 789999999985 689998 79999999999999999999975332222 2245
Q ss_pred ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCC----C--CCC-----CCCCCCCCCCCcchhhhH
Q 001579 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----G--IPA-----PEKSQPLGTIAAAPWGSA 850 (1050)
Q Consensus 782 ~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~----~--~~~-----~~~~~~t~~i~sa~~g~~ 850 (1050)
+++|+.++++||.| |.+|+|++++++++.+.++....+... + ... ...+.++.++. .
T Consensus 211 ~~~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~-----~- 278 (401)
T PRK10874 211 LDIDFYAFSGHKLY------GPTGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVA-----G- 278 (401)
T ss_pred cCCCEEEEeccccc------CCCccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHH-----H-
Confidence 78999999999965 335789999998877666432111100 0 000 00111222221 1
Q ss_pred HHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHC
Q 001579 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1050)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~ 930 (1050)
..+..+.+..+...|+.+..++...+++++.++|+++..+...++.. ...+.|++. +++.+++.+.|.++
T Consensus 279 --~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~--~~i~~~~~~------~~~~~~~~~~L~~~ 348 (401)
T PRK10874 279 --VIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQD--SSLLAFDFA------GVHHSDLVTLLAEY 348 (401)
T ss_pred --HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCC--CcEEEEEEC------CcCHHHHHHHHHHC
Confidence 11223334445556676777777788999999998753332111111 112344443 35678999999999
Q ss_pred CcccCCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 931 GFHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 931 Gi~~~~~~~---------pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
||.+..... ...+.+||++..++|++|||+|+++|++++..
T Consensus 349 gI~v~~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 349 GIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred CcEEeccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 998754321 12478999999999999999999999998765
No 58
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.89 E-value=4.2e-21 Score=242.09 Aligned_cols=349 Identities=15% Similarity=0.144 Sum_probs=233.9
Q ss_pred HHHHHhcCCCccccccCCCCCCCCCcHHHHHHHHhCCCccccc--CCChh-HHhhhHHHHHHHHHHHHHHhcCCCCcc--
Q 001579 156 HMQKLASMNKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQY--TPYQA-EIAQGRLESLLNFQTMIADLTGLPMSN-- 230 (1050)
Q Consensus 156 ~~~~la~~n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~y--tpyq~-eisqG~le~l~e~q~~ia~L~G~~~an-- 230 (1050)
++..+ ++.+|.++-|.+.+ -|.++.+.+.. |+..+ .|+.. ..++-..+.+.+.++.+++++|++..+
T Consensus 28 ~fp~l--~~~iYLD~Aatt~~---~~~~V~~~~~~---~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~ 99 (805)
T PLN02724 28 EFARL--KGVVYLDHAGATLY---SESQLEAALAD---FSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYA 99 (805)
T ss_pred Hhhhc--CCCEeEeCCCCCCC---CHHHHHHHHHH---HHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceE
Confidence 45544 34567777777653 23444422221 22111 23321 245566788999999999999997654
Q ss_pred eeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch------------------hhh
Q 001579 231 ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------------------DID 292 (1050)
Q Consensus 231 asl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~------------------~l~ 292 (1050)
+.++.++|.++..+..++.+ ++|++||++..+|++++. |+.+++..|+++++++++ +++
T Consensus 100 VvFtsnaT~alnlva~~l~~--~~gd~Iv~t~~eH~svl~-~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~ 176 (805)
T PLN02724 100 CVFTSGATAALKLVGETFPW--SSESHFCYTLENHNSVLG-IREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQ 176 (805)
T ss_pred EEEeCChHHHHHHHHHHCCC--CCCCeEEEeeccccchHH-HHHHHHHcCCeEEeccchhccccccccccccccchhhhh
Confidence 67888898766655444433 378999999999999885 445567789999988653 122
Q ss_pred c-c----------CCCeeEEEEEc-CCCCeeEccHHHHHHHHHhC-------C-cEEEE-EecCccccCCC-CCCcccce
Q 001579 293 Y-K----------SGDVCGVLVQY-PGTEGEVLDYGDFIKNAHAN-------G-VKVVM-ATDLLALTILK-PPGELGAD 350 (1050)
Q Consensus 293 ~-l----------~~~t~~V~v~~-pn~~G~i~di~~I~~~ah~~-------g-alliV-~a~~~alg~l~-~pg~~GaD 350 (1050)
. + +++|++|++++ +|.+|.+.|++.|.++++.. | ++++| +++ ++|.+. +..++|+|
T Consensus 177 ~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ--~~g~~piDv~~~~~D 254 (805)
T PLN02724 177 RRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAK--GCGTSPPDLSRYPAD 254 (805)
T ss_pred hhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhh--hcCCCCCChhhcCCC
Confidence 1 1 13567888886 69999999999775544432 3 56778 344 444332 45689999
Q ss_pred EEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeE-eecCC-CCcceEEecccccccccccccCCCccchhHHH
Q 001579 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV-SIDSS-GKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1050)
Q Consensus 351 ivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~-s~d~~-g~~~~~l~lqtreq~irRekaTsnict~~~l~ 427 (1050)
++++|+ |+||.|. |.|+|++++++.+.+++.+.|+ +.+.. ....|.. ...+.+-|+|.||.|+ .+..
T Consensus 255 fl~~S~HK~~GgP~-----G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~--~~~~~~~rfE~GT~n~---~~i~ 324 (805)
T PLN02724 255 FVVVSFYKIFGYPT-----GLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVK--RRERVEQRFEDGTISF---LSIA 324 (805)
T ss_pred EEEEecceeccCCC-----CceEEEEehhhhhhhcCCccCCCceEEEecccceee--ccccHHHHhcCCCcch---hHHH
Confidence 999999 5444343 4789999999888888777774 22100 0001111 1112356789999999 4566
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC------CEEEcCCC--------CccEEEEecCC-------HH
Q 001579 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG------TVEVQGLP--------FFDTVKVKCAD-------AH 486 (1050)
Q Consensus 428 a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G------~~~l~~~~--------~~~~v~i~~~~-------~~ 486 (1050)
++.+++ .++-..|+++|.+++..++++|.++|+++. ++++++.. ...+|+|++.+ ..
T Consensus 325 ~l~aal--~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~ 402 (805)
T PLN02724 325 ALRHGF--KLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHR 402 (805)
T ss_pred HHHHHH--HHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHH
Confidence 666666 566566899999999999999999999873 37787532 23467776543 34
Q ss_pred HHHHHHHHcCceeee------------e---------------------------cCCeEEEEeccCCCHHHHHHHHHHH
Q 001579 487 AIASAAYKIEMNLRV------------V---------------------------DSNTVTASFDETTTLEDVDKLFIVF 527 (1050)
Q Consensus 487 ~i~~~L~~~GI~~~~------------~---------------------------~~~~lris~~e~~t~edId~lv~~l 527 (1050)
++...+.++||.+|. + ..+.||+|++.+||.+|||+|+++|
T Consensus 403 ~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l 482 (805)
T PLN02724 403 EVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFI 482 (805)
T ss_pred HHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHH
Confidence 455555678997642 0 1278999999999999999999999
Q ss_pred hC
Q 001579 528 AG 529 (1050)
Q Consensus 528 ~~ 529 (1050)
+.
T Consensus 483 ~~ 484 (805)
T PLN02724 483 IS 484 (805)
T ss_pred HH
Confidence 74
No 59
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.89 E-value=5.4e-21 Score=220.08 Aligned_cols=312 Identities=15% Similarity=0.144 Sum_probs=210.8
Q ss_pred cHHHHHHHHHHHHHHhhCCCe--eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCcc--HHHHHhCCCEE
Q 001579 629 GYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN--PATAAMCGMKI 704 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~--~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~--pa~a~~~G~~v 704 (1050)
+..+..+++++.+++++|.+. ..+.+++|+++...+ ++++. .++++||++...|..+ ...+++.|.++
T Consensus 29 ~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~---~~~~~-----~~g~~vl~~~~~~~~~~~~~~~~~~g~~~ 100 (356)
T cd06451 29 EFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAA---LSNLL-----EPGDKVLVGVNGVFGDRWADMAERYGADV 100 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHH---HHHhC-----CCCCEEEEecCCchhHHHHHHHHHhCCCe
Confidence 355778899999999999853 235566666655333 33331 2457888877656543 23467889999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCccc
Q 001579 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~G 783 (1050)
+.++.++++.+|++++++.+++ .++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+... ...+.+|
T Consensus 101 ~~v~~~~~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~-~~~~i~~~a~~~~~~li~D~~~~~g~~~-~~~~~~~ 176 (356)
T cd06451 101 DVVEKPWGEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLN-PLEGIGALAKKHDALLIVDAVSSLGGEP-FRMDEWG 176 (356)
T ss_pred EEeecCCCCCCCHHHHHHHHhc--cCCCEEEEeccCCCccccc-CHHHHHHHHHhcCCEEEEeeehhccCcc-ccccccC
Confidence 9999988889999999999972 378899999984 689987 7999999999999999999986432211 2345678
Q ss_pred CcEEEeCCccccccCCCCCCCcceeeeecccccCCCCC--CccccCCCC----CCCCCCCCCCCCCcchhhhHHHHHHHH
Q 001579 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS--HPVVSTGGI----PAPEKSQPLGTIAAAPWGSALILPISY 857 (1050)
Q Consensus 784 aDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg--~~vg~~~~~----~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1050)
+|++++++||+|+.| +|+|++++++++.+.+.. ...++..+. ...+......+ +. +........
T Consensus 177 ~d~~~~s~~K~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--t~---~~~~~~a~~ 246 (356)
T cd06451 177 VDVAYTGSQKALGAP-----PGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPH--TP---PVNLLYALR 246 (356)
T ss_pred ccEEEecCchhccCC-----CCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCC--CC---hHHHHHHHH
Confidence 999999999999633 468999999876654421 111110000 00000001111 11 111222334
Q ss_pred HHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCcccee-EEEecccccccCCCCHHHHHHHHHHC-Cccc
Q 001579 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHE-FIVDLRGLKNTAGIEPEDVAKRLMDY-GFHG 934 (1050)
Q Consensus 858 a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e-~i~~~~~~~~~~g~~~~~vakrL~d~-Gi~~ 934 (1050)
+.+..+..+|+.+..++...+++++.++|++. +++... + ....+. +.+.++ .+.+.++++++|.++ ||.+
T Consensus 247 aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~-~~~~~~~~~~~~~-----~~~~~~~~~~~L~~~~gI~~ 319 (356)
T cd06451 247 EALDLILEEGLENRWARHRRLAKALREGLEALGLKLLAK-P-ELRSPTVTAVLVP-----EGVDGDEVVRRLMKRYNIEI 319 (356)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccC-c-ccCCCceEEEECC-----CCCCHHHHHHHHHHhCCEEE
Confidence 55666667788888888889999999999875 444321 1 111111 223332 245788999999987 9987
Q ss_pred CCCCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 935 PTMSWP-VPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 935 ~~~~~p-v~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
.....+ .++.+|++++..+|++||++|+++|.+++
T Consensus 320 ~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 320 AGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred ecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 533222 35799999999999999999999998865
No 60
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.89 E-value=1e-20 Score=223.34 Aligned_cols=314 Identities=16% Similarity=0.154 Sum_probs=213.9
Q ss_pred HHHHHHHHHHHHHhhCCCe--eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEE
Q 001579 631 QEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKI 704 (1050)
Q Consensus 631 ~~~i~el~~~lael~G~d~--~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~v 704 (1050)
.+.+.++++.+++++|.+. ..+..++++++...+ ++.+... ...++++||++...|+++.. .++..|+++
T Consensus 75 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i---~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v 150 (424)
T PLN02855 75 TDAYELARKKVAAFINASTSREIVFTRNATEAINLV---AYTWGLA-NLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL 150 (424)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHH---HHHhhhh-cCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE
Confidence 3567889999999999852 223444555444222 3322100 01245789998887865432 256789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCccc
Q 001579 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~G 783 (1050)
+.++++.++.+|+++|++.++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++|
T Consensus 151 ~~v~~~~~~~~~~~~l~~~i~---~~t~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~a~~~g~~~~-~~~~~~ 225 (424)
T PLN02855 151 KFVGLTPDEVLDVEQLKELLS---EKTKLVATHHVSNVLGSIL-PVEDIVHWAHAVGAKVLVDACQSVPHMPV-DVQTLG 225 (424)
T ss_pred EEEecCCCCCcCHHHHHHHhc---cCceEEEEeCccccccccC-CHHHHHHHHHHcCCEEEEEhhhhcCCcCC-CchhcC
Confidence 999998888899999999997 689999999985 699998 79999999999999999999975433322 234678
Q ss_pred CcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCC------CC--CC--C-CCCCCCCCCCcchhhhHHH
Q 001579 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG------GI--PA--P-EKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 784 aDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~------~~--~~--~-~~~~~t~~i~sa~~g~~~~ 852 (1050)
+|++++++||.+ |.+|+|++++++++.+.++....|... +. .. . +.+.+|.++ ..
T Consensus 226 ~d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~--------~~ 291 (424)
T PLN02855 226 ADFLVASSHKMC------GPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAI--------GE 291 (424)
T ss_pred CCEEEeeccccc------CCCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHH--------HH
Confidence 999999999943 345799999998877666543322211 00 00 0 011122221 12
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCe-eecCCCC----ccceeEEEecccccccCCCCHHHHHHHH
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI-LFRGVNG----TVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v-~~~g~~g----~~~~e~i~~~~~~~~~~g~~~~~vakrL 927 (1050)
.....+.+..+...|+.++.++...++++++++|+++..+ ++ ++.. ...+.+.|.++ +++.+++.++|
T Consensus 292 ~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~-~~~~~~~~~r~~~v~~~~~------~~~~~~v~~~L 364 (424)
T PLN02855 292 AIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIY-GPKPSEGVGRAALCAFNVE------GIHPTDLSTFL 364 (424)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe-CCCcccccCcccEEEEEEC------CcCHHHHHHHh
Confidence 2233445555656688888888889999999999875332 22 2111 11223445543 45778999999
Q ss_pred HHC-CcccCCCCC---------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 928 MDY-GFHGPTMSW---------PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 928 ~d~-Gi~~~~~~~---------pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
.++ ||.+....+ ...+.+||+++.++|.+|||+|+++|++++...++
T Consensus 365 ~~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~~ 421 (424)
T PLN02855 365 DQQHGVAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFFSS 421 (424)
T ss_pred cccCCEEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 876 998753211 12468999999999999999999999999887665
No 61
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.88 E-value=8.6e-21 Score=221.75 Aligned_cols=310 Identities=18% Similarity=0.207 Sum_probs=205.7
Q ss_pred ccHHHHHHHHHHHHHHhhCCCeee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCC
Q 001579 628 QGYQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGM 702 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~ 702 (1050)
++..+.++++++.+++++|.+... +..++++++.. ++++++... ..++++||++...|.++.. .++..|+
T Consensus 56 ~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~---~~~~~~~~~--~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 130 (397)
T TIGR01976 56 RRADQVVDDAREAVADLLNADPPEVVFGANATSLTF---LLSRAISRR--WGPGDEVIVTRLDHEANISPWLQAAERAGA 130 (397)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH---HHHHHHHhc--CCCCCEEEEcCCchHhHHHHHHHHHHhcCC
Confidence 456678899999999999987533 33344444432 222322111 1256789998888866542 2567899
Q ss_pred EEEEEcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCC
Q 001579 703 KIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1050)
Q Consensus 703 ~vv~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg 780 (1050)
+++.+++++ ++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+.. .....
T Consensus 131 ~~~~~~~~~~~~~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~i~~~~~~~~~~~ivD~a~~~~~~-~~~~~ 205 (397)
T TIGR01976 131 KVKWARVDEATGELHPDDLASLLS---PRTRLVAVTAASNTLGSIV-DLAAITELVHAAGALVVVDAVHYAPHG-LIDVQ 205 (397)
T ss_pred EEEEEeccccCCCcCHHHHHHhcC---CCceEEEEeCCCCCCCccC-CHHHHHHHHHHcCCEEEEehhhhcccc-CCCHH
Confidence 999999876 68999999999996 789999999994 689998 799999999999999999998753322 12334
Q ss_pred cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHH
Q 001579 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1050)
Q Consensus 781 ~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1050)
++++|++++++||+| ||++|++++++++.+.+................+.++.+ ++....+..|..++
T Consensus 206 ~~~~d~~~~s~~K~~-------g~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~-----~~~~~~l~~al~~~ 273 (397)
T TIGR01976 206 ATGADFLTCSAYKFF-------GPHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQ-----YELLAGVVAAVDYL 273 (397)
T ss_pred HcCCCEEEEechhhc-------CCceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCC-----HHHHHHHHHHHHHH
Confidence 679999999999987 356899999987765553221111000000001112222 22223334455555
Q ss_pred HHHCh-----------hhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHH
Q 001579 861 AMMGS-----------KGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1050)
Q Consensus 861 ~~lG~-----------eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL 927 (1050)
...|. +++++..++....++++.++|+++ +++..........+.+.+.+. +.+..++.++|
T Consensus 274 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~L 347 (397)
T TIGR01976 274 AGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVH------GLPPQRVVRRL 347 (397)
T ss_pred HHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeC------CcCHHHHHHHH
Confidence 55552 135666677778899999999875 333211001112333344432 35678999999
Q ss_pred HHCCcccCCCC-C----------C-CCCEEEEEcCCCCCHHHHHHHHHHH
Q 001579 928 MDYGFHGPTMS-W----------P-VPGTLMIEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 928 ~d~Gi~~~~~~-~----------p-v~~~lrI~~te~~t~eeid~fv~aL 965 (1050)
.++||.+.+.. + | ..+.+||+++.++|++|+|+|+++|
T Consensus 348 ~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 348 ADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 99999986432 1 1 1368999999999999999999875
No 62
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.88 E-value=2.9e-20 Score=217.99 Aligned_cols=288 Identities=15% Similarity=0.131 Sum_probs=208.0
Q ss_pred HHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhh-hcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc
Q 001579 210 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1050)
Q Consensus 210 le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~-~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~ 288 (1050)
.+.+.++++.+++++|.++.++.+..|+|.+.+.++.++.. ..+++++|+++..+|+++...++.. +..|++++.++.
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~-~~~g~~v~~v~~ 124 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYL-EREGFEVTYLPP 124 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHH-HhcCCEEEEEcc
Confidence 46788899999999999888899999999887776654321 1237899999999999999888653 356888888754
Q ss_pred --------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecCc
Q 001579 289 --------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 357 (1050)
Q Consensus 289 --------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~k 357 (1050)
+++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|++ ..+.|... +..++|+|+++++++
T Consensus 125 ~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~-a~a~g~~~~~~~~~~~D~~~~s~~ 203 (402)
T TIGR02006 125 KSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDA-AQSVGKIPINVNELKVDLMSISGH 203 (402)
T ss_pred CCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEc-chhcCCcccCccccCCCEEEEehh
Confidence 34555 6778999999987 779999999999999999999999943 34555443 446789999999995
Q ss_pred cccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHH
Q 001579 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1050)
Q Consensus 358 ~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~ 437 (1050)
++.+| ++.|+++++++....+.+.+.| |.. .-+.|.||.|+ ....++.+++ .+
T Consensus 204 K~~gp-----~G~G~l~~~~~~~~~~~~~~~g------~~~-----------~~~~~~gt~~~---~~~~al~~al--~~ 256 (402)
T TIGR02006 204 KIYGP-----KGIGALYVRRKPRVRLEALIHG------GGH-----------ERGMRSGTLPT---HQIVGMGEAF--RI 256 (402)
T ss_pred hhcCC-----CceEEEEEccCCCCCCCceecC------CCc-----------cCCccCCCccH---HHHHHHHHHH--HH
Confidence 55333 3588999998765555443322 111 01346789988 4455555555 23
Q ss_pred hCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--Cc-c--EEEEecCCHHHHHHHHHHcCceeee-----------
Q 001579 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--FF-D--TVKVKCADAHAIASAAYKIEMNLRV----------- 501 (1050)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~--~~-~--~v~i~~~~~~~i~~~L~~~GI~~~~----------- 501 (1050)
+ .++++++.++..+++++++++|+++.++++.++. .. . .|+|......++...| +||.++.
T Consensus 257 ~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l--~~i~v~~G~~c~~~~~~~ 333 (402)
T TIGR02006 257 A-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEGESLIMAL--KDLAVSSGSACTSASLEP 333 (402)
T ss_pred H-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCHHHHHHhc--CCEEEechhhcCCCCCCc
Confidence 2 2478889999999999999999987548876421 22 1 2444422255666665 3554321
Q ss_pred --------e----cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 502 --------V----DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 502 --------~----~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
+ ..+.||+|++.+||++|||+|+++|..
T Consensus 334 ~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~ 373 (402)
T TIGR02006 334 SYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKS 373 (402)
T ss_pred cHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 0 137899999999999999999999963
No 63
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.88 E-value=2.1e-20 Score=217.60 Aligned_cols=288 Identities=17% Similarity=0.135 Sum_probs=207.3
Q ss_pred HHHHHHHHHHHHHhcCC-CCcceeEecchHHHHHHHHHHhhh---hcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEE
Q 001579 210 LESLLNFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNNI---QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1050)
Q Consensus 210 le~l~e~q~~ia~L~G~-~~anasl~d~~Taa~eA~~la~~~---~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1050)
.+.+.+....+++.+|. ++.++.+++|+|.++..++.+..+ .+.++++|+++..+||++...+.. ++..|++++.
T Consensus 41 ~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~-~~~~G~~v~~ 119 (382)
T TIGR03403 41 HPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAF-LESLGVEVTY 119 (382)
T ss_pred HHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHH-HHHCCCEEEE
Confidence 45566676777777787 567898999998666554443311 112357899999999999998764 3567899888
Q ss_pred cCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC-CCCCcccceEEEe
Q 001579 286 SDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVG 354 (1050)
Q Consensus 286 ~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~pg~~GaDivvg 354 (1050)
++. +++++ +++++++|++++| |.+|.+.|+++|+++||++|++++|++ ..+.+.. .+..++|+|+++.
T Consensus 120 v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~-a~~~g~~~~~~~~~~~D~~~~ 198 (382)
T TIGR03403 120 LPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDA-VQAIGKIPVDVQKAGVDFLSF 198 (382)
T ss_pred EecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEec-hhhcCCCccCccccCCCEEEE
Confidence 865 34545 6778999999886 789999999999999999999999943 3455533 2456789999999
Q ss_pred cCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHH
Q 001579 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1050)
Q Consensus 355 s~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y 434 (1050)
|+++|. |.||.|++++++++ .+.+.+.|.. . .-+++.||.|+ .+++++.+++
T Consensus 199 s~~K~~-----gp~G~g~l~vr~~~--~~~p~~~g~~------~-----------~~~~~~gt~~~---~~~~al~~al- 250 (382)
T TIGR03403 199 SAHKFH-----GPKGVGGLYIRKGV--ELTPLFHGGE------H-----------MGGRRSGTLNV---PYIVAMGEAM- 250 (382)
T ss_pred cchhhC-----CCCceEEEEECCCC--CCCCcccCCC------C-----------CCCcccCCcCh---HHHHHHHHHH-
Confidence 995563 33568899998865 2333333311 0 01234688887 4555555555
Q ss_pred HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC--C-ccEEEEecCC--HHHHHHHHHHcCceeee--------
Q 001579 435 AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP--F-FDTVKVKCAD--AHAIASAAYKIEMNLRV-------- 501 (1050)
Q Consensus 435 ~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~--~-~~~v~i~~~~--~~~i~~~L~~~GI~~~~-------- 501 (1050)
.++ .++++++.+++..+.++|.++|+++++++++++. . .+.+.|.+++ +.++.+.|.++||.++.
T Consensus 251 -~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~ 328 (382)
T TIGR03403 251 -RLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASED 328 (382)
T ss_pred -HHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCC
Confidence 222 3457888899999999999999988559887532 2 2244566654 77888889999998863
Q ss_pred ---------e------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 502 ---------V------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 502 ---------~------~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
+ ..+.||+|++.+||++|||+|+++|+.
T Consensus 329 ~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~ 371 (382)
T TIGR03403 329 LEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKK 371 (382)
T ss_pred CCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHH
Confidence 0 125799999999999999999999963
No 64
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.88 E-value=2.6e-20 Score=216.51 Aligned_cols=309 Identities=17% Similarity=0.197 Sum_probs=204.9
Q ss_pred HHHHHHHHHHHHHHhhCCCeee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhCCCEEE
Q 001579 630 YQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIV 705 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~---a~~~G~~vv 705 (1050)
..+.++++++++++++|.+... +..++|++|...++.++..+ . .++++|+++...|.++... ++..|++++
T Consensus 40 ~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~--~---~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~ 114 (379)
T TIGR03402 40 VGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAA--Q---PEKRHIITTAVEHPAVLSLCQHLEKQGYKVT 114 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHh--c---CCCCeEEEcccccHHHHHHHHHHHHcCCEEE
Confidence 4567889999999999987532 44456666664444443211 1 1346788888777665443 334699999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccC
Q 001579 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1050)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~Ga 784 (1050)
.++.+++|.+|+++|+++++ +++++++++++ |.+|.+. |+++|+++||++|+++++|+++..+...+ ...++|+
T Consensus 115 ~v~~~~~g~~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~-~~~~I~~l~~~~g~~vivD~~~~~g~~~~-~~~~~~~ 189 (379)
T TIGR03402 115 YLPVDEEGRLDLEELRAAIT---DDTALVSVMWANNETGTIF-PIEEIGEIAKERGALFHTDAVQAVGKIPI-DLKEMNI 189 (379)
T ss_pred EEccCCCCcCCHHHHHHhcC---CCcEEEEEEcccCCeeecc-cHHHHHHHHHHcCCEEEEECccccccccc-CcccCCC
Confidence 99998889999999999997 78899999988 4689998 79999999999999999999875432211 2345799
Q ss_pred cEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
|++++++|| ++ |.+|+|++++++... .-| ...+... ..+.+.++.++. +++ ...+.+.++
T Consensus 190 D~~~~s~~K-~~-----gp~G~g~l~v~~~~~-~~p-~~~g~~~---~~~~~~gt~~~~-------~~~-~l~~al~~~- 249 (379)
T TIGR03402 190 DMLSLSGHK-LH-----GPKGVGALYIRKGTR-FRP-LLRGGHQ---ERGRRAGTENVP-------GIV-GLGKAAELA- 249 (379)
T ss_pred CEEEEcHHH-cC-----CCCceEEEEECCCCC-CCC-cccCCcc---CCCcCCCCccHH-------HHH-HHHHHHHHH-
Confidence 999999999 52 335789999987642 212 1111110 001122222222 111 112222222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhc-cCCeeecCCCC-ccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-C--
Q 001579 865 SKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-- 939 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~-~~~v~~~g~~g-~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~-~-- 939 (1050)
.+++.+..++...+++++.++|++ +..+...++.. ...+.+.+.+. +.+.+++.+.|.++||.+..-. +
T Consensus 250 ~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gI~v~~g~~c~~ 323 (379)
T TIGR03402 250 TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFE------YIEGEAILLLLDMEGICASSGSACTS 323 (379)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEec------CCCHHHHHHhhccCCEEEEchhhcCC
Confidence 235666666777888999999985 43332223211 11122334433 3577899999999999864311 0
Q ss_pred ----C-------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 940 ----P-------------VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 940 ----p-------------v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
| ..+.+|++++.++|++|||+|+++|++++++.++
T Consensus 324 ~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 324 GSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred CCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0 1378999999999999999999999999877553
No 65
>PRK02948 cysteine desulfurase; Provisional
Probab=99.88 E-value=2.8e-20 Score=216.41 Aligned_cols=291 Identities=13% Similarity=0.089 Sum_probs=209.0
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhh-cCCCCEEEEcCCCChhHHHHHHHhccCCCeEEE
Q 001579 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ-KGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1050)
Q Consensus 206 sqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~-~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~ 284 (1050)
.....+.+.++++.+++++|.++.++.+..|+|.++..++.++.-. .+++++|+++..+||++...++. ++..|++++
T Consensus 38 ~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~-~~~~g~~v~ 116 (381)
T PRK02948 38 GGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQS-LESQGYTVT 116 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHH-HHhCCCEEE
Confidence 3444567889999999999998888988888897776655443210 13678999999999999988765 355788888
Q ss_pred EcCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEE
Q 001579 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1050)
Q Consensus 285 ~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivv 353 (1050)
.++. +++++ +.++++.|++++| |.+|.+.|+++|+++||++|++++|+ ..+++|... ...++|+|+++
T Consensus 117 ~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD-~~~~~g~~~~~~~~~~~d~~~ 195 (381)
T PRK02948 117 EIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSD-CVQTFGKLPIDVFEMGIDSLS 195 (381)
T ss_pred EEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEE-ChhhccccccCcccCCCCEEE
Confidence 8764 34555 6678899999998 68999999999999999999999995 345555432 34678999999
Q ss_pred ecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH
Q 001579 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1050)
Q Consensus 354 gs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~ 433 (1050)
.+++++. |.||.|+++++++.. +.....+ . .+..+.+.+|.|+ .+..+..+++
T Consensus 196 ~s~~K~~-----gp~G~G~l~~~~~~~--~~~~~~~-------~----------~~~~~~~~~t~~~---~~~~a~~~al 248 (381)
T PRK02948 196 VSAHKIY-----GPKGVGAVYINPQVR--WKPVFPG-------T----------THEKGFRPGTVNV---PGIAAFLTAA 248 (381)
T ss_pred ecHHhcC-----CCCcEEEEEEcCCCC--CCCcccC-------C----------CCCCCcCCCCccH---HHHHHHHHHH
Confidence 9984443 334589999887641 1110000 0 0112345678887 3455555554
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEc--C-CC-Cc-cEEEEecCC--HHHHHHHHHHcCceeeeec---
Q 001579 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ--G-LP-FF-DTVKVKCAD--AHAIASAAYKIEMNLRVVD--- 503 (1050)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~--~-~~-~~-~~v~i~~~~--~~~i~~~L~~~GI~~~~~~--- 503 (1050)
.++ .++++++.+++.++.++++++|+++| +++. + .. .. ..+.+..++ +.++...|.++||.++...
T Consensus 249 --~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~ 324 (381)
T PRK02948 249 --ENI-LKNMQEESLRFKELRSYFLEQIQTLP-LPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQ 324 (381)
T ss_pred --HHH-HHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcC
Confidence 222 23678899999999999999999987 6543 2 11 12 234555554 6778888988999986310
Q ss_pred --------------------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 504 --------------------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 504 --------------------~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
.+.+|+|++.+||++|+|+|+++|+.
T Consensus 325 ~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 325 VGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALET 370 (381)
T ss_pred CCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHH
Confidence 36899999999999999999999963
No 66
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.87 E-value=5.1e-20 Score=213.25 Aligned_cols=342 Identities=16% Similarity=0.212 Sum_probs=223.5
Q ss_pred CHHHHHHHHHHHhcCCCcc---ccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcC
Q 001579 149 TESQMIEHMQKLASMNKVY---KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTG 225 (1050)
Q Consensus 149 sE~e~~~~~~~la~~n~~~---~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G 225 (1050)
||.|+++.++++-+....+ +.++.++..+ .|.+.. .+.. ++..+ ...+....|..+...++++.+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-a~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~g 73 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNP--HPIAVK-AYDM---FIETN-LGDPGLFPGTKKIEEEVVGSLGNLLH 73 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCc--hHHHHH-HHHH---HhhcC-CCCcccCccHHHHHHHHHHHHHHHhC
Confidence 6899999999985554433 2234444433 333322 1211 11111 01111223556677889999999999
Q ss_pred CCCcceeEecchHHHHHHHHHHhhh--h-cCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-
Q 001579 226 LPMSNASLLDEGTAAAEAMAMCNNI--Q-KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY- 293 (1050)
Q Consensus 226 ~~~anasl~d~~Taa~eA~~la~~~--~-~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~- 293 (1050)
++.+++.++.++|.+...++.+... . .+++++|++++..|+++...++ ..|++++.++. +++++
T Consensus 74 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~----~~G~~~~~v~~~~~~~~d~~~l~~~ 149 (373)
T TIGR03812 74 LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAE----MLGLELRYAPLDEDYTVDVKDVEDL 149 (373)
T ss_pred CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHH----HcCCeEEEEeeCCCCCcCHHHHHHH
Confidence 9988888899998776555443321 1 1256899999999999777653 45788777753 34555
Q ss_pred cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC-------C-CC---CcccceEEEecCccccc
Q 001579 294 KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-------K-PP---GELGADIVVGSAQRFGV 361 (1050)
Q Consensus 294 l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-------~-~p---g~~GaDivvgs~k~~g~ 361 (1050)
+++++..+++..| |.+|.+.|+++|+++||++|++++|++ .++.+.+ . .+ ...|+|.+..++++|+.
T Consensus 150 l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~-a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~ 228 (373)
T TIGR03812 150 IDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDA-AFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGL 228 (373)
T ss_pred HhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEc-CchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCC
Confidence 5666655554444 679999999999999999999999943 2222111 0 01 12488999888855643
Q ss_pred -cCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCc
Q 001579 362 -PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGP 440 (1050)
Q Consensus 362 -P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~ 440 (1050)
|. |..|+++.++++.+.+... .+ |.. . .+ + ..+.||.|. ....++.++ +.+++.
T Consensus 229 ~~~----~~G~~~~~~~~~~~~l~~~----------~~-~~~-~-~~-~--~~~~gt~~~---~~~~~~~~~--l~~l~~ 283 (373)
T TIGR03812 229 SPI----PAGGILFRSKSYLKYLSVD----------AP-YLT-V-KK-Q--ATITGTRSG---ASAAATYAV--IKYLGR 283 (373)
T ss_pred CcC----CceEEEEeCHHHHhhhccc----------Cc-ccC-C-CC-C--cceEeechh---HHHHHHHHH--HHHhCH
Confidence 32 3446776777777665210 00 100 0 00 0 011244443 223333333 467889
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCCHHHHHHHHHHcCceeeee-cCCeEEEEeccCCCHHH
Q 001579 441 EGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV-DSNTVTASFDETTTLED 519 (1050)
Q Consensus 441 ~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~i~~~L~~~GI~~~~~-~~~~lris~~e~~t~ed 519 (1050)
+|++++.+++.+++++|+++|+++| ++.+..+..+.+.+..++..++.++|.++||.++.. .+..+|+|++.++|++|
T Consensus 284 ~g~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~ed 362 (373)
T TIGR03812 284 EGYRKIVAECMENTRYLVEELKKIG-FEPVIEPVLNIVAFEVDDPEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREH 362 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC-CeEEcCCCceEEEEEeCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHH
Confidence 9999999999999999999999998 654433445567777666678999999999998765 35789999999999999
Q ss_pred HHHHHHHHh
Q 001579 520 VDKLFIVFA 528 (1050)
Q Consensus 520 Id~lv~~l~ 528 (1050)
+|+|+++|+
T Consensus 363 id~l~~~L~ 371 (373)
T TIGR03812 363 IEEFLEDLK 371 (373)
T ss_pred HHHHHHHHh
Confidence 999999985
No 67
>PRK02948 cysteine desulfurase; Provisional
Probab=99.87 E-value=4.5e-20 Score=214.60 Aligned_cols=307 Identities=16% Similarity=0.207 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHHHHhhCCCeeee-ccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhCCCEEE
Q 001579 630 YQEMFNNLGEWLCTITGFDSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIV 705 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~~~l-~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~---a~~~G~~vv 705 (1050)
..+.++++++.+++++|.+...+ ..++++++...++.++ .... ..++++|+++...|.++..+ ++..|++++
T Consensus 41 ~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~---~~~~-~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~ 116 (381)
T PRK02948 41 ASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL---LNAL-PQNKKHIITTPMEHASIHSYFQSLESQGYTVT 116 (381)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH---HHhc-cCCCCEEEECCcccHHHHHHHHHHHhCCCEEE
Confidence 34678899999999999875443 3444555554333333 2111 12457888888888777665 456799999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccC
Q 001579 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1050)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~Ga 784 (1050)
.++++++|.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++|+++|+++++|+++..+...+ ...+++.
T Consensus 117 ~v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~vivD~~~~~g~~~~-~~~~~~~ 191 (381)
T PRK02948 117 EIPVDKSGLIRLVDLERAIT---PDTVLASIQHANSEIGTIQ-PIAEIGALLKKYNVLFHSDCVQTFGKLPI-DVFEMGI 191 (381)
T ss_pred EEeeCCCCCCCHHHHHHhcC---CCCEEEEEECCcCCcEeeh-hHHHHHHHHHHcCCEEEEEChhhcccccc-CcccCCC
Confidence 99998889999999999996 678999999995 799998 79999999999999999998765432222 2346799
Q ss_pred cEEEeCCccccccCCCCCCCcceeeeeccccc--CCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHH
Q 001579 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLA--PFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~--~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1050)
|+++.++||+| |.+|+|++++++++. +..++.. . ..+...++.++. + ..++.+.+..
T Consensus 192 d~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~~----~---~~~~~~~t~~~~----~----~~a~~~al~~ 250 (381)
T PRK02948 192 DSLSVSAHKIY------GPKGVGAVYINPQVRWKPVFPGTT----H---EKGFRPGTVNVP----G----IAAFLTAAEN 250 (381)
T ss_pred CEEEecHHhcC------CCCcEEEEEEcCCCCCCCcccCCC----C---CCCcCCCCccHH----H----HHHHHHHHHH
Confidence 99999999976 345789999887641 1111110 0 000011111211 1 1122233333
Q ss_pred HChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCc-cceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC--
Q 001579 863 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGT-VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-- 938 (1050)
Q Consensus 863 lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~-~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~-- 938 (1050)
+. +++.+..++...+++++.++|++. +++...+.... ..+.+.+.+. +++.+++.+.|.++||.+...+
T Consensus 251 ~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~~gI~v~~g~~c 323 (381)
T PRK02948 251 IL-KNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIK------GIEGQYTMLECNRRGIAISTGSAC 323 (381)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeC------CCCHHHHHHhcccCCEEEEchHhc
Confidence 22 356677778888999999999886 55533221111 1111222322 4567888989999999975321
Q ss_pred ---C--C-------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 939 ---W--P-------------VPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 939 ---~--p-------------v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
+ | ..+.+||+++.++|++|+|+|+++|++++++..
T Consensus 324 ~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 324 QVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred CCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1 1 136899999999999999999999999876543
No 68
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.87 E-value=1.5e-20 Score=217.83 Aligned_cols=303 Identities=19% Similarity=0.247 Sum_probs=210.7
Q ss_pred cHHHHHHHHHHHHHHhhCCCe-ee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCC
Q 001579 629 GYQEMFNNLGEWLCTITGFDS-FS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGM 702 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~-~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~ 702 (1050)
...++++++++.+++++|.+. .. +...+++.|...++.++.. . ..++++|++....|.++... ++..|+
T Consensus 40 ~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~---~--~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~ 114 (371)
T PF00266_consen 40 EFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLN---P--LKPGDEVLVTSNEHPSNRYPWEEIAKRKGA 114 (371)
T ss_dssp HHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHH---H--GTTTCEEEEEESSHHHHHHHHHHHHHHTTE
T ss_pred hhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccc---c--cccccccccccccccccccccccccccchh
Confidence 356788999999999999987 44 3445555555444444321 1 12467888888777666522 346899
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCc
Q 001579 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1050)
Q Consensus 703 ~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~ 781 (1050)
+|+.++.+.++.+|+++++++|+ +++.+|++++. +.+|+.. |+++|+++||++|+++++|+++..+...+ ...+
T Consensus 115 ~v~~i~~~~~~~~~~~~~~~~l~---~~~~lv~~~~~~~~tG~~~-pi~~I~~~~~~~~~~~~vD~~~~~g~~~i-d~~~ 189 (371)
T PF00266_consen 115 EVRVIPADPGGSLDLEDLEEALN---PDTRLVSISHVENSTGVRN-PIEEIAKLAHEYGALLVVDAAQSAGCVPI-DLDE 189 (371)
T ss_dssp EEEEEEEGTTSSCSHHHHHHHHH---TTESEEEEESBETTTTBBS-SHHHHHHHHHHTTSEEEEE-TTTTTTSS---TTT
T ss_pred hhccccccccchhhhhhhhhhhc---cccceEEeecccccccEEe-eeceehhhhhccCCceeEechhccccccc-cccc
Confidence 99999998889999999999998 89999999987 5689998 89999999999999999999986555433 3457
Q ss_pred ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccC-CCC------C----CCCCCCCCCCCCcchhhhH
Q 001579 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVST-GGI------P----APEKSQPLGTIAAAPWGSA 850 (1050)
Q Consensus 782 ~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~-~~~------~----~~~~~~~t~~i~sa~~g~~ 850 (1050)
+|+|++++++|| |+ |+||+|++++++++...+.....++. .+. . ....+.+|.++.
T Consensus 190 ~~~D~~~~s~~K-l~-----gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~------- 256 (371)
T PF00266_consen 190 LGADFLVFSSHK-LG-----GPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVP------- 256 (371)
T ss_dssp TTESEEEEESTS-TT-----SSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HH-------
T ss_pred cccceeeecccc-cC-----CCCchhhheehhhhhhccccccccccccccccchhcccccccccccccceeee-------
Confidence 899999999999 84 56789999999865554422211111 000 0 000111122221
Q ss_pred HHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCC--CccceeEEEecccccccCCCCHHHHHHHHH
Q 001579 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1050)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~--g~~~~e~i~~~~~~~~~~g~~~~~vakrL~ 928 (1050)
.+......+.++.+.|++++.++...+++++.+.|+++..+...++. ......+.+.++ +.+..++.++|.
T Consensus 257 -~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~L~ 329 (371)
T PF00266_consen 257 -AIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLP------GSDADDVVKYLE 329 (371)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEET------TSSHHHHHHHHH
T ss_pred -hhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeec------CCCHHHHHHHHh
Confidence 12233456677777889998899999999999999987444332321 112223445543 567899999999
Q ss_pred HCCcccCCCCC---C------CCCEEEEEcCCCCCHHHHHHH
Q 001579 929 DYGFHGPTMSW---P------VPGTLMIEPTESESKEELDRY 961 (1050)
Q Consensus 929 d~Gi~~~~~~~---p------v~~~lrI~~te~~t~eeid~f 961 (1050)
++||.+.+-.. | ..+.+||+++.++|++|||+|
T Consensus 330 ~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 330 ERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred hcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 99999754111 1 248999999999999999986
No 69
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.87 E-value=6.6e-20 Score=219.13 Aligned_cols=379 Identities=16% Similarity=0.183 Sum_probs=231.6
Q ss_pred CCcccCCCCCHHHHHHHHHHHhccccCcccccccccccccCcchhh---hhccccccccccCCCCCchhhcccHHHHHHH
Q 001579 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATT---EMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1050)
Q Consensus 560 ~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~---~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~e 636 (1050)
.+| ..+.+..++++.+.+.-........+.-++|+-+.-++... ..+... .+-+.+.. +.++...++..+
T Consensus 61 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~~~p~~~~~l~~l~~~----lN~n~~~~-~~spa~t~lE~~ 133 (522)
T TIGR03799 61 EIP--EQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTSALPYFMLPLSKLMVA----LNQNLVKI-ETSKAFTPLERQ 133 (522)
T ss_pred CCC--CCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccCCCchHHHHHHHHHHH----hcCCccee-ecCcchHHHHHH
Confidence 455 45667778888865543333222233445665332222221 111111 12222222 567778899999
Q ss_pred HHHHHHHhhCC------------C--eeeeccCchHHHHHHHHHHHHHHHHh-c----CC-------------CCCCEEE
Q 001579 637 LGEWLCTITGF------------D--SFSLQPNAGAAGEYAGLMVIRAYHKA-R----GD-------------HHRNVCI 684 (1050)
Q Consensus 637 l~~~lael~G~------------d--~~~l~~~sGa~ge~a~Llair~y~~~-~----G~-------------~~r~~Vl 684 (1050)
+..|++++++. + ......++|+.+++.++.+.|..... . |. .++..|+
T Consensus 134 v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~ 213 (522)
T TIGR03799 134 VLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAIL 213 (522)
T ss_pred HHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEE
Confidence 99999999852 1 11244567787887777777754211 0 10 1345788
Q ss_pred EcCCCCCccHHHHHhCCC---EEEEEcCCCCCCCCHHHHHHHHHc---CCCCEEEEEEEcCC-CccccccCHHHHHHHHH
Q 001579 685 IPVSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEA---NRDNLSTLMVTYPS-THGVYEEGIDEICKIIH 757 (1050)
Q Consensus 685 ip~saHgt~pa~a~~~G~---~vv~V~~d~~g~iD~e~L~~~i~~---~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~ 757 (1050)
++..+|.++...+.+.|+ +++.||+|++|++|+++|+++|++ .+..+.+|+.+..+ .+|.++ ||++|+++|+
T Consensus 214 ~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiD-pl~eIa~i~~ 292 (522)
T TIGR03799 214 VSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNID-PLDEMADIAQ 292 (522)
T ss_pred ECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcC-CHHHHHHHHH
Confidence 999999999888899898 899999999999999999999963 22345556655555 489999 8999999999
Q ss_pred HcCCEEEEeccccccccccCC------CCcccCcEEEeCCccccccCCCCCCCcceeeeecc-cccCCCCCC--ccccCC
Q 001579 758 DNGGQVYMDGANMNAQVGLTS------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSH--PVVSTG 828 (1050)
Q Consensus 758 ~~G~~v~vD~A~~~al~gl~~------pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~--~vg~~~ 828 (1050)
++|+++|||+|+..+.. +.. .|-.++|.+++|.|||+..|+| .|++++++ .+...+... +.....
T Consensus 293 ~~g~~lHVDaA~gg~~~-~~~~~r~~l~gle~aDSit~d~HK~l~~P~g-----~G~llvr~~~~~~~~~~~~~Yl~~~~ 366 (522)
T TIGR03799 293 ELGCHFHVDAAWGGATL-LSNTYRHLLKGIERADSVTIDAHKQLYVPMG-----AGMVLFKDPALMSAIEHHAEYILRKG 366 (522)
T ss_pred HcCCeEEEEchhhhHHH-hCHHHHHHhcCchhCCEEEEChhhcCCcCcc-----cEEEEEeCHHHHHHhccCcchhcCCC
Confidence 99999999998542211 111 1224799999999999976655 46888875 333322211 000000
Q ss_pred CCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEE
Q 001579 829 GIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFI 906 (1050)
Q Consensus 829 ~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i 906 (1050)
. ... ...... ++ .- ..+...|+.++.+|.+|++++.++.+.+++|+.++|++. ++++. .+..+.+.
T Consensus 367 ~-~d~-~~~~le--gs-R~---~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~----~p~l~iv~ 434 (522)
T TIGR03799 367 S-KDL-GSHTLE--GS-RP---GMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVT----EPELCLLT 434 (522)
T ss_pred C-Ccc-ccceee--cC-cc---hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEec----CCCccEEE
Confidence 0 000 001111 11 11 122357999999999999999999999999999999875 55542 13444455
Q ss_pred EecccccccC-------------C--CC--HHHHHHHHHHCCccc-C-C-CC---CCC--CCEEEEEcC-CCCCHHHHHH
Q 001579 907 VDLRGLKNTA-------------G--IE--PEDVAKRLMDYGFHG-P-T-MS---WPV--PGTLMIEPT-ESESKEELDR 960 (1050)
Q Consensus 907 ~~~~~~~~~~-------------g--~~--~~~vakrL~d~Gi~~-~-~-~~---~pv--~~~lrI~~t-e~~t~eeid~ 960 (1050)
|...+-.-.. + .+ ...|.+++.+.|... . | +. |.- .-.+|+++. ..+|+++|+.
T Consensus 435 Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~ 514 (522)
T TIGR03799 435 YRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQD 514 (522)
T ss_pred EEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHH
Confidence 5543210000 0 00 135667777777653 1 1 11 210 135888874 4677888888
Q ss_pred HHHH
Q 001579 961 YCDA 964 (1050)
Q Consensus 961 fv~a 964 (1050)
+++.
T Consensus 515 ~l~~ 518 (522)
T TIGR03799 515 ILDE 518 (522)
T ss_pred HHHH
Confidence 7664
No 70
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.87 E-value=1.3e-19 Score=210.95 Aligned_cols=308 Identities=15% Similarity=0.150 Sum_probs=198.4
Q ss_pred HHHHHHHHHHhhCC-Ceee-eccCchHHHHHHHHHHHHHHHHhcC-CCCCCEEEEcCCCCCccHHH---HHhCCCEEEEE
Q 001579 634 FNNLGEWLCTITGF-DSFS-LQPNAGAAGEYAGLMVIRAYHKARG-DHHRNVCIIPVSAHGTNPAT---AAMCGMKIVSV 707 (1050)
Q Consensus 634 i~el~~~lael~G~-d~~~-l~~~sGa~ge~a~Llair~y~~~~G-~~~r~~Vlip~saHgt~pa~---a~~~G~~vv~V 707 (1050)
+.+..+.+.+.+|. +... +..++++++.. ++++.+....- ..++++|+++...|.++..+ ++..|++++.+
T Consensus 44 l~~a~~~~~~~~~~~~~~~i~~t~g~teal~---~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v 120 (382)
T TIGR03403 44 IAEALDKLYKGINARDLDDIIITSCATESNN---WVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYL 120 (382)
T ss_pred HHHHHHHHHHHcCcCCCCeEEEeCCHHHHHH---HHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEE
Confidence 44444455555665 3333 34444554443 33343211000 11346789988888776654 34689999999
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcE
Q 001579 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1050)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv 786 (1050)
+++++|.+|+++|+++++ ++++++++++| |.+|.+. |+++|+++||++|+++++|+++..+... ....++|+|+
T Consensus 121 ~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~~ivD~a~~~g~~~-~~~~~~~~D~ 195 (382)
T TIGR03403 121 PINEQGTITAEQVREAIT---EKTALVSVMWANNETGMIF-PIKEIGEICKERGVLFHTDAVQAIGKIP-VDVQKAGVDF 195 (382)
T ss_pred ecCCCCCCCHHHHHHhcc---cCCeEEEEEcccCCCcccc-CHHHHHHHHHHcCCEEEEechhhcCCCc-cCccccCCCE
Confidence 998889999999999997 67899999988 4799998 7999999999999999999986533221 2345689999
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+++++||++ |.||+|++++++.+. .-| ...|... ..+.+.++.++. +. ..+...+..+ .+
T Consensus 196 ~~~s~~K~~------gp~G~g~l~vr~~~~-~~p-~~~g~~~---~~~~~~gt~~~~----~~----~al~~al~~~-~~ 255 (382)
T TIGR03403 196 LSFSAHKFH------GPKGVGGLYIRKGVE-LTP-LFHGGEH---MGGRRSGTLNVP----YI----VAMGEAMRLA-NE 255 (382)
T ss_pred EEEcchhhC------CCCceEEEEECCCCC-CCC-cccCCCC---CCCcccCCcChH----HH----HHHHHHHHHH-HH
Confidence 999999975 346789999987542 112 1111100 001112222221 11 1122223332 33
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeecCCCC-ccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC----C--
Q 001579 867 GLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS----W-- 939 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g-~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~----~-- 939 (1050)
++....++....++++.++|+++..+...++.. ...+-+.|.++ +++..++.++|.++||.+.+-+ +
T Consensus 256 ~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~L~~~gI~v~~g~~c~~~~~ 329 (382)
T TIGR03403 256 YLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK------GVEGEAMLWDLNKAGIAASTGSACASEDL 329 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC------CCCHHHHHHhhccCCEEEEchhccCCCCC
Confidence 455556667778899999998753332223211 11223345543 4678899999999999976311 0
Q ss_pred -----------C---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001579 940 -----------P---VPGTLMIEPTESESKEELDRYCDALISIREEIAQI 975 (1050)
Q Consensus 940 -----------p---v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~~ 975 (1050)
+ ..+.+|++++.++|++|||+|+++|++++++++.+
T Consensus 330 ~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~~~ 379 (382)
T TIGR03403 330 EANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLRAI 379 (382)
T ss_pred CcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 0 12679999999999999999999999999887763
No 71
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=5.1e-20 Score=208.62 Aligned_cols=325 Identities=18% Similarity=0.235 Sum_probs=237.2
Q ss_pred ccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCccee-EecchHHHHHHHHHHh
Q 001579 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNAS-LLDEGTAAAEAMAMCN 248 (1050)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anas-l~d~~Taa~eA~~la~ 248 (1050)
.+..| |+-+|+.+++.+.. +- .. -..|+ -.+.+.+.++.+..+++.+...+. +..+||+++||++..+
T Consensus 8 Ll~PG--P~~v~~~V~~am~~-~~-~~---h~s~~----F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl 76 (383)
T COG0075 8 LLTPG--PVPVPPRVLLAMAR-PM-VG---HRSPD----FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL 76 (383)
T ss_pred eeeCC--CCCCCHHHHHHhcC-CC-CC---CCCHH----HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhc
Confidence 45677 66788888755553 32 22 12333 235566677788889998843344 4478999999988654
Q ss_pred hhhcCCCCEEEEcC-CCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cC--CCeeEEEEEcC-CCCeeEccH
Q 001579 249 NIQKGKKKTFIIAS-NCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDY 315 (1050)
Q Consensus 249 ~~~~~~gd~Vlvs~-~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~--~~t~~V~v~~p-n~~G~i~di 315 (1050)
- . +||+|++.. +.|..-..-+ ++.+|.+++.++. +++++ ++ ++.+.|.+++. +++|.++|+
T Consensus 77 ~-~--pgdkVLv~~nG~FG~R~~~i---a~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl 150 (383)
T COG0075 77 V-E--PGDKVLVVVNGKFGERFAEI---AERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPL 150 (383)
T ss_pred c-C--CCCeEEEEeCChHHHHHHHH---HHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcH
Confidence 2 2 788877555 7887665554 5567777777643 56665 54 67888888775 889999999
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCC-CCCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeec
Q 001579 316 GDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1050)
Q Consensus 316 ~~I~~~ah~~galliV~a~~~alg~l-~~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d 393 (1050)
++|+++++++|++++|++ ..|+|.. -.+.+||+|+++.++ |.|+.| ||+|+++++++.++.+..+
T Consensus 151 ~~I~~~~k~~g~l~iVDa-VsS~Gg~~~~vd~wgiDv~itgSQK~l~~P-----PGla~v~~S~~a~e~~~~~------- 217 (383)
T COG0075 151 KEIAKAAKEHGALLIVDA-VSSLGGEPLKVDEWGIDVAITGSQKALGAP-----PGLAFVAVSERALEAIEER------- 217 (383)
T ss_pred HHHHHHHHHcCCEEEEEe-cccCCCcccchhhcCccEEEecCchhccCC-----CccceeEECHHHHHHHhcC-------
Confidence 999999999999999955 4577755 357899999999999 668766 8899999999988877432
Q ss_pred CCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-
Q 001579 394 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL- 472 (1050)
Q Consensus 394 ~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~- 472 (1050)
..++|+++|..-.+...++..|+.....+.++|+..++ ..+-.+|++++.+|...++++++++++++| ++++.+
T Consensus 218 --~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al--~~i~~EGle~r~~RH~~~~~a~r~~~~alG-l~~~~~~ 292 (383)
T COG0075 218 --KHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREAL--DLILEEGLEARIARHRRLAEALRAGLEALG-LELFADP 292 (383)
T ss_pred --CCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CccccCc
Confidence 12258888865444444445666666668889988887 667789999999999999999999999999 998752
Q ss_pred -CCccEE-EEecCC---HHHHHHHHH-HcCceeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 473 -PFFDTV-KVKCAD---AHAIASAAY-KIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 473 -~~~~~v-~i~~~~---~~~i~~~L~-~~GI~~~~----~~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
...+++ ++..+. ..++...+. +.|+.+.. +.+..+||..+=.-+.+|+...+.+|+.
T Consensus 293 ~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~ 359 (383)
T COG0075 293 ERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEA 359 (383)
T ss_pred ccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHH
Confidence 233454 345554 334444555 45887743 2356899998889999999999999963
No 72
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.86 E-value=8.8e-20 Score=211.50 Aligned_cols=305 Identities=16% Similarity=0.168 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHHhhCCCee-e-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCE
Q 001579 630 YQEMFNNLGEWLCTITGFDSF-S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 703 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~~-~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~ 703 (1050)
..+.+.++++++++++|.+.. . +..++++++...+ ++.+. .++++||++...|+++.. .++..|.+
T Consensus 42 ~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~---~~~~~-----~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~ 113 (376)
T TIGR01977 42 ASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIA---LKGLL-----KEGDHVITTPMEHNSVARPLECLKEQIGVE 113 (376)
T ss_pred HHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHH---HHhcc-----CCCCEEEECcchhhHHHHHHHHHHHHcCcE
Confidence 446688999999999998642 3 3444555554333 33221 245789998877766543 24556999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc
Q 001579 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1050)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~ 782 (1050)
++.++.+.++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ....+
T Consensus 114 ~~~v~~~~~~~~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~-~~~~i~~l~~~~~~~livD~a~~~g~~~~-~~~~~ 188 (376)
T TIGR01977 114 ITIVKCDNEGLISPERIKRAIK---TNTKLIVVSHASNVTGTIL-PIEEIGELAQENGIFFILDAAQTAGVIPI-DMTEL 188 (376)
T ss_pred EEEEecCCCCCcCHHHHHHhcC---CCCeEEEEECCCCCccccC-CHHHHHHHHHHcCCEEEEEhhhccCccCC-Cchhc
Confidence 9999998889999999999996 689999999985 689998 79999999999999999999875333222 12357
Q ss_pred cCcEEEeCCccccccCCCCCCCcceeeeecccc-cCC-CCCCccccC--CCC---CCCCCCCCCCCCCcchhhhHHHHHH
Q 001579 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APF-LPSHPVVST--GGI---PAPEKSQPLGTIAAAPWGSALILPI 855 (1050)
Q Consensus 783 GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l-~~~-lpg~~vg~~--~~~---~~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1050)
|+|++++++||||+.| +|.|+++++++. ... ..+...... .+. ...+.+.++.++ ..+..
T Consensus 189 ~~D~~~~s~~K~l~~p-----~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~--------~~~~a 255 (376)
T TIGR01977 189 AIDMLAFTGHKGLLGP-----QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNT--------PGIAG 255 (376)
T ss_pred CCCEEEecccccccCC-----CCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCH--------HHHHH
Confidence 9999999999999533 366778877653 222 111100000 000 000011111111 12233
Q ss_pred HHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCe-eecCCCC--ccceeEEEecccccccCCCCHHHHHHHHHHC-C
Q 001579 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI-LFRGVNG--TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY-G 931 (1050)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v-~~~g~~g--~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~-G 931 (1050)
.++.+..+...|+..+.++...+++++.++|++...+ ++ ++.. ...+.+.|.++ +.+..++.++|.++ |
T Consensus 256 ~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~~~~~L~~~~g 328 (376)
T TIGR01977 256 LNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIY-GPADPANRVGVVSFTVE------GIDSEEVADILDEKFD 328 (376)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCCCccccCCeEEEEEC------CCCHHHHHHHHhccCC
Confidence 4556677778888888888889999999999875322 12 2111 11222334443 45778999999987 8
Q ss_pred cccCCCCC-----------CCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001579 932 FHGPTMSW-----------PVPGTLMIEPTESESKEELDRYCDALIS 967 (1050)
Q Consensus 932 i~~~~~~~-----------pv~~~lrI~~te~~t~eeid~fv~aL~~ 967 (1050)
|.+..-.+ ...+.+||+++..+|.+|||+++++|++
T Consensus 329 i~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 329 IATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 88643110 0247899999999999999999999976
No 73
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.86 E-value=1.2e-19 Score=212.77 Aligned_cols=309 Identities=15% Similarity=0.169 Sum_probs=203.8
Q ss_pred HHHHHHHHHHHHHhhCCCee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhCCCEEEE
Q 001579 631 QEMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVS 706 (1050)
Q Consensus 631 ~~~i~el~~~lael~G~d~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~---a~~~G~~vv~ 706 (1050)
.+.++++++.+++++|.+.. .+..++|+++...++.++..+.. .++++|+++...|.++... ++..|++++.
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~----~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~ 121 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYK----SKGNHIITSKTEHKAVLDTCRYLEREGFEVTY 121 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhc----CCCCEEEECCCccHHHHHHHHHHHhcCCEEEE
Confidence 35688899999999998753 34555666666554444432111 2457899988888765544 3456999999
Q ss_pred EcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCc
Q 001579 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1050)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaD 785 (1050)
++++++|.+|+++|+++++ +++++|++++++ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++|+|
T Consensus 122 v~~~~~~~~d~~~l~~~l~---~~~~lv~v~~~~n~tG~~~-~~~~I~~l~~~~g~~livD~a~a~g~~~~-~~~~~~~D 196 (402)
T TIGR02006 122 LPPKSNGLIDLEELKAAIR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERKVFFHVDAAQSVGKIPI-NVNELKVD 196 (402)
T ss_pred EccCCCCcCCHHHHHHhcC---CCCEEEEEECCCcCceecc-cHHHHHHHHHHcCCEEEEEcchhcCCccc-CccccCCC
Confidence 9998889999999999996 678999999984 689998 89999999999999999999975433322 23467999
Q ss_pred EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHCh
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1050)
Q Consensus 786 v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1050)
++++++||++ |.+|+|+++++++....+.....+... .++.+.++.++. ....+ ...+..+ .
T Consensus 197 ~~~~s~~K~~------gp~G~G~l~~~~~~~~~~~~~~~g~~~---~~~~~~gt~~~~-----~~~al---~~al~~~-~ 258 (402)
T TIGR02006 197 LMSISGHKIY------GPKGIGALYVRRKPRVRLEALIHGGGH---ERGMRSGTLPTH-----QIVGM---GEAFRIA-K 258 (402)
T ss_pred EEEEehhhhc------CCCceEEEEEccCCCCCCCceecCCCc---cCCccCCCccHH-----HHHHH---HHHHHHH-H
Confidence 9999999965 334789999997544333221111100 001112222221 11111 2233333 2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCC-ccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC------CC
Q 001579 866 KGLTEASKIAILNANYMAKRLEKHYPILFRGVNG-TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT------MS 938 (1050)
Q Consensus 866 eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g-~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~------~~ 938 (1050)
+++....++...+++++.++|+++..+...++.. ...+.+++.+. +++.+++..+|. |+.+.+ ..
T Consensus 259 ~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~------~~~~~~~~~~l~--~i~v~~G~~c~~~~ 330 (402)
T TIGR02006 259 EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFN------YVEGESLIMALK--DLAVSSGSACTSAS 330 (402)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEe------CcCHHHHHHhcC--CEEEechhhcCCCC
Confidence 4567777777788999999998753332222111 12233345544 245667777764 443211 00
Q ss_pred -CC--------C-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 939 -WP--------V-----PGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 939 -~p--------v-----~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
.| + .+.+|+++..++|++|||+|+++|+++.++++.
T Consensus 331 ~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~~ 380 (402)
T TIGR02006 331 LEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLRE 380 (402)
T ss_pred CCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 01 1 378999999999999999999999999887654
No 74
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.86 E-value=7.5e-20 Score=217.41 Aligned_cols=305 Identities=19% Similarity=0.184 Sum_probs=204.9
Q ss_pred HHHH-HHHHHHHHhhCCCe----eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHH--------
Q 001579 632 EMFN-NLGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-------- 698 (1050)
Q Consensus 632 ~~i~-el~~~lael~G~d~----~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~-------- 698 (1050)
+.++ ..++.+++++|.+. +++++.||++++.+++.++. . ++++|++....||.+...+.
T Consensus 79 ~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~----~----~gd~Ii~~~~ehg~~l~~~~~l~~~~~~ 150 (452)
T PTZ00094 79 DKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALL----Q----PHDRIMGLDLPSGGHLTHGFYTAKKKVS 150 (452)
T ss_pred HHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhc----C----CCCEEEecccccCCcccccccccccccc
Confidence 4454 36779999999875 34666788877755444431 1 45789998888988765321
Q ss_pred --hCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEecccccccccc
Q 001579 699 --MCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1050)
Q Consensus 699 --~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl 776 (1050)
..+++++.++++.+|.+|+++|++++++++ ++.|+++. +.+|... |+++|+++||++|++++||++|..++.+.
T Consensus 151 ~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~--~~lvi~~~-s~~g~~~-di~~I~~i~~~~ga~l~vDaaq~~G~i~~ 226 (452)
T PTZ00094 151 ATSIYFESLPYQVNEKGLIDYDKLEELAKAFR--PKLIIAGA-SAYPRDI-DYKRFREICDSVGAYLMADIAHTSGLVAA 226 (452)
T ss_pred cceeeeeeeecccCCCCCcCHHHHHHHHHHhC--CCEEEEeC-CCCCCcc-CHHHHHHHHHHcCCEEEEeccchhccccC
Confidence 122456667777789999999999997543 44455554 4578887 89999999999999999999987655432
Q ss_pred C---CCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHH
Q 001579 777 T---SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1050)
Q Consensus 777 ~---~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1050)
. .|. .++|++++++||||+ ||..|++++++.+.+.+.... .. ...+...+++ +...+
T Consensus 227 ~~~~~~~-~~~D~l~~S~hK~l~------GP~Gg~l~~~~~~~~~l~~~~-~~----------~~~p~~~G~~--~~~~i 286 (452)
T PTZ00094 227 GVLPSPF-PYADVVTTTTHKSLR------GPRSGLIFYRKKVKPDIENKI-NE----------AVFPGLQGGP--HNHQI 286 (452)
T ss_pred CCCCCCC-CCCcEEEcCCccCCC------CCCceEEEEecccchHHHHhh-cc----------ccCCCCCCCc--hHHHH
Confidence 1 232 389999999999994 565578888765543221110 00 0000111110 11223
Q ss_pred HHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCc
Q 001579 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1050)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi 932 (1050)
+...+.+..+...+..+..++...++++|.++|++. +++...+. ..|..++++.. .+++..++.+.|.++||
T Consensus 287 aal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~---~~~~~~v~~~~----~~~~~~~~~~~L~~~gI 359 (452)
T PTZ00094 287 AAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGT---DNHLVLVDLRP----FGITGSKMEKLLDAVNI 359 (452)
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCC---CCceEeecCCc----CCCCHHHHHHHHHHCCc
Confidence 334445566655677778888889999999999874 66643221 12445666542 35678899999999999
Q ss_pred ccCCC--CC---C-CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHHHHHHH
Q 001579 933 HGPTM--SW---P-VPGTLMIEPTESES----KEELDRYCDALISIREEIAQI 975 (1050)
Q Consensus 933 ~~~~~--~~---p-v~~~lrI~~te~~t----~eeid~fv~aL~~i~~ei~~~ 975 (1050)
.+... .+ + .++++|+++++.++ ++|||+++++|.+++......
T Consensus 360 ~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~~~~~ 412 (452)
T PTZ00094 360 SVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKLAQEI 412 (452)
T ss_pred EEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 87421 11 1 24789999988776 999999999999998875443
No 75
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.86 E-value=5.7e-20 Score=214.70 Aligned_cols=307 Identities=17% Similarity=0.208 Sum_probs=211.0
Q ss_pred HHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHH-----------------------HHHhcCCCCCCEEEEc
Q 001579 630 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRA-----------------------YHKARGDHHRNVCIIP 686 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~-----------------------y~~~~G~~~r~~Vlip 686 (1050)
..++.....+..+++||.+.+++||.||++++.+.++++.. |.+-|.+-++|+|+..
T Consensus 93 ~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l 172 (493)
T PRK13580 93 VDTVEWEAAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGM 172 (493)
T ss_pred HHHHHHHHHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEee
Confidence 34555556778899999999999999999999888777642 1111111125788866
Q ss_pred CCCCCccHH-----HHHhCCCEEEEEcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcC
Q 001579 687 VSAHGTNPA-----TAAMCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNG 760 (1050)
Q Consensus 687 ~saHgt~pa-----~a~~~G~~vv~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G 760 (1050)
+..||-|-. ......++++..++|+ +|.+|++++++++. +++..|+++..+.+|... |+++|+++|+++|
T Consensus 173 ~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~---~~~plvii~g~S~~~~~~-dl~~i~eia~~~g 248 (493)
T PRK13580 173 SLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAR---EFKPLILVAGYSAYPRRV-NFAKLREIADEVG 248 (493)
T ss_pred cCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHh---hcCCEEEEeCccccCCCc-CHHHHHHHHHHcC
Confidence 556654422 2222236777888875 59999999999998 667778877766545555 7999999999999
Q ss_pred CEEEEecccccccccc-C-----CCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCC
Q 001579 761 GQVYMDGANMNAQVGL-T-----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE 834 (1050)
Q Consensus 761 ~~v~vD~A~~~al~gl-~-----~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~ 834 (1050)
++++||+||..++.+. . .| ..++||+++++||||+ ||..|+|++++++.+++. ...
T Consensus 249 A~L~VD~AH~~Gligg~~~~~~~~~-~~~~D~vtgT~hKaL~------GP~GG~I~~~~~l~~~L~-~a~---------- 310 (493)
T PRK13580 249 AVLMVDMAHFAGLVAGKVFTGDEDP-VPHADIVTTTTHKTLR------GPRGGLVLAKKEYADAVD-KGC---------- 310 (493)
T ss_pred CEEEEECchhhceeccccchhhcCC-CCCCcEEEeCChhhcc------CCCeEEEEecHHHHHHHh-hCC----------
Confidence 9999999997666441 1 12 2379999999999994 676789999988776651 000
Q ss_pred CCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEeccccc
Q 001579 835 KSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLK 913 (1050)
Q Consensus 835 ~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~ 913 (1050)
+.+.+++. ...+++.+.+....+. ...++..++.+.|+++|+++|++. ++++.. +...|.+.+++.+.
T Consensus 311 -----P~i~gg~l-~p~iAA~avAl~e~~~-~ef~~y~~~l~~Na~~La~~L~~~G~~vv~g---gTdshIV~V~lg~~- 379 (493)
T PRK13580 311 -----PLVLGGPL-PHVMAAKAVALAEART-PEFQKYAQQVVDNARALAEGFLKRGARLVTG---GTDNHLVLIDVTSF- 379 (493)
T ss_pred -----CcccCCCc-cHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHhcCCCccCC---CCCCCEEEEEeCCH-
Confidence 00111011 1123333334333333 334667888999999999999885 776532 23457778887631
Q ss_pred ccCCCCHHHHHHHHHHCCcccCCCCCC-C------CCEEEEEcCC----CCCHHHHHHHHHHHHHHHHHH
Q 001579 914 NTAGIEPEDVAKRLMDYGFHGPTMSWP-V------PGTLMIEPTE----SESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 914 ~~~g~~~~~vakrL~d~Gi~~~~~~~p-v------~~~lrI~~te----~~t~eeid~fv~aL~~i~~ei 972 (1050)
+.....+.++|.+.||.+.....| + ...|||+++. .++++||+++++.|.++++..
T Consensus 380 ---~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 380 ---GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred ---HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 233457788999999998765444 2 4579999998 456999999999999888754
No 76
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=4.7e-20 Score=206.83 Aligned_cols=320 Identities=22% Similarity=0.314 Sum_probs=227.2
Q ss_pred cccccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC-CCeeeeccCchHHHHHHHHHH
Q 001579 589 HSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMV 667 (1050)
Q Consensus 589 ~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G-~d~~~l~~~sGa~ge~a~Lla 667 (1050)
.++..||+|++++..+...+.-.. ... .+-|.. +...++.+.|+++++ ++.+ |+.|||++++++++..
T Consensus 51 iav~~lGH~hP~iv~al~~Q~~kl-~h~-sn~~~~--------~~~~~la~~L~~~s~~~d~v-ff~NSGaEA~EaAiKl 119 (404)
T COG4992 51 IAVNNLGHCHPALVEALKEQAEKL-WHV-SNLFYN--------EPQAELAEKLVELSPFADRV-FFCNSGAEANEAALKL 119 (404)
T ss_pred eeeeccCCCCHHHHHHHHHHHHHh-hhc-ccccCC--------hHHHHHHHHHHhhCccccEE-EEcCCcHHHHHHHHHH
Confidence 456789999988887776653111 111 111211 224478899999997 6665 7789999999999999
Q ss_pred HHHHHHhcCCCCCCEEEEcCCCCCccHHH---------HHhCC---CEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEE
Q 001579 668 IRAYHKARGDHHRNVCIIPVSAHGTNPAT---------AAMCG---MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLM 735 (1050)
Q Consensus 668 ir~y~~~~G~~~r~~Vlip~saHgt~pa~---------a~~~G---~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~ 735 (1050)
.|.|.. +..++.+|-...+.||....+ .+.++ -.++.||+ -|+++|+++|+ ++|++|+
T Consensus 120 ARk~~~--~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-----nDi~al~~ai~---~~taAvi 189 (404)
T COG4992 120 ARKYTG--DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-----NDIEALEAAID---EDTAAVI 189 (404)
T ss_pred HHHHcC--CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-----CCHHHHHHHhc---cCeEEEE
Confidence 998853 222334444678999865443 22222 02456666 49999999998 7999999
Q ss_pred EEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCccccccCCCCCC
Q 001579 736 VTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGG 803 (1050)
Q Consensus 736 vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~hKtf~~P~g~GG 803 (1050)
++.- ...|++. +.++++.++|++||+++|+|.. |.|+.+.|++ -+||++. .|.++ ||
T Consensus 190 vEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEV----QtG~GRTGk~fA~e~~gV~PDI~tl--aK~Lg-----GG 258 (404)
T COG4992 190 VEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEV----QTGLGRTGKLFAYEHYGVEPDILTL--AKALG-----GG 258 (404)
T ss_pred EecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecc----ccCCCccchHHHHHHhCCCCCEEEe--ecccc-----CC
Confidence 9864 4678775 3589999999999999999976 7899999864 3799887 58773 55
Q ss_pred CcceeeeecccccCCC-CCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHH
Q 001579 804 PGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYM 882 (1050)
Q Consensus 804 Pg~G~i~v~~~l~~~l-pg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl 882 (1050)
-.+|.+.+++.....+ ||. |+ +++.|+++.++++.+.+..+.++++.+.++ +...||
T Consensus 259 ~PigA~la~~~~~~~~~~G~----------Hg---------STfGGNpLacAv~~a~l~~l~~e~ll~~v~---~~g~~~ 316 (404)
T COG4992 259 FPIGAMLATEEIASAFTPGD----------HG---------STFGGNPLACAVALAVLEVLLEEGLLENVR---EKGEYL 316 (404)
T ss_pred ccceeeEEchhhhhcCCCCc----------cc---------CCCCcCHHHHHHHHHHHHHHcchhHHHHHH---HHHHHH
Confidence 6678888775544433 221 11 236688999999999999999888776544 678899
Q ss_pred HHHHhcc---CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHH
Q 001579 883 AKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEE 957 (1050)
Q Consensus 883 ~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~ee 957 (1050)
.++|+++ |+++ ..|. | .+.. +.+.. ...+.++.+.|.++|+.+.... ++.+|+.|+...|+||
T Consensus 317 ~~~L~~l~~~~~~v~~vRG~-G-LmiG--iel~~-----~~~a~~~~~~~~~~gvL~~~a~---~~ViR~~PpL~i~~ee 384 (404)
T COG4992 317 LQRLRELKRRYPLVKEVRGR-G-LMIG--IELKE-----PYRARDIVRALREEGVLVLPAG---PNVIRFLPPLVITEEE 384 (404)
T ss_pred HHHHHHHhhcCCceeeeecc-e-eEEE--EEecC-----cccHHHHHHHHHHCCeEEecCC---CCeEEecCCccCCHHH
Confidence 9999885 4432 1221 2 2211 22221 1247899999999999875443 5799999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001579 958 LDRYCDALISIREEIAQ 974 (1050)
Q Consensus 958 id~fv~aL~~i~~ei~~ 974 (1050)
||..+++|.++++....
T Consensus 385 i~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 385 IDEALDALERALAAASA 401 (404)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999999876543
No 77
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.86 E-value=1e-19 Score=213.22 Aligned_cols=323 Identities=14% Similarity=0.111 Sum_probs=224.7
Q ss_pred ccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCc-ceeEecchHHHHHHHHHHh
Q 001579 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLLDEGTAAAEAMAMCN 248 (1050)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~a-nasl~d~~Taa~eA~~la~ 248 (1050)
+.+.| |..+|+.+.+.+.. +. ..+. +.+..+.+.+.++.+++++|.+.. .+.+..+||+++++++...
T Consensus 12 l~~pG--P~~~~~~V~~a~~~-~~--~~~~------~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~ 80 (401)
T PLN02409 12 LFVPG--PVNIPERVLRAMNR-PN--EDHR------SPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNT 80 (401)
T ss_pred eccCC--CCCCCHHHHHHhcC-CC--CCCC------CHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhc
Confidence 44666 66787777655543 22 2221 334466778888999999999764 4566678888777666543
Q ss_pred hhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cCC----CeeEEEEEcC-CCCeeEcc
Q 001579 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSG----DVCGVLVQYP-GTEGEVLD 314 (1050)
Q Consensus 249 ~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~----~t~~V~v~~p-n~~G~i~d 314 (1050)
+ ++||+|++++..|++.. |...++..|++++.++. +++++ +++ ++++|+++++ |.+|.+.|
T Consensus 81 -~--~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~ 155 (401)
T PLN02409 81 -L--SPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND 155 (401)
T ss_pred -C--CCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCC
Confidence 2 38999999998887764 33335567888887753 34554 543 7899998875 78999999
Q ss_pred HHHHHHH--HHhCCcEEEEEecCccccCCC-CCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeE
Q 001579 315 YGDFIKN--AHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (1050)
Q Consensus 315 i~~I~~~--ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~ 390 (1050)
+++|+++ ||++|++++|++ ..++|.+. +..+||+|++++++ |+|++| |++||+++++++.+++...-
T Consensus 156 ~~~i~~l~~~~~~g~~~vvD~-v~s~g~~~id~~~~~~D~~~~s~~K~l~~P-----~G~G~l~~~~~~~~~~~~~~--- 226 (401)
T PLN02409 156 LAGVRKLLDCAQHPALLLVDG-VSSIGALDFRMDEWGVDVALTGSQKALSLP-----TGLGIVCASPKALEASKTAK--- 226 (401)
T ss_pred HHHHHHHHhhhccCcEEEEEc-ccccCCccccccccCccEEEEcCccccCcC-----CCcceeEECHHHHHHHhcCC---
Confidence 9999999 999999999943 45666543 34689999999999 667655 45899999998877653210
Q ss_pred eecCCCCcceEEecccccc--cc-cccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCE
Q 001579 391 SIDSSGKPALRVAMQTREQ--HI-RRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1050)
Q Consensus 391 s~d~~g~~~~~l~lqtreq--~i-rRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~ 467 (1050)
...+.+.+..... .. .+...|+|+ ..++++.+++ .++..+|++++.++..++++++++.|+++| +
T Consensus 227 ------~~~~~~~~~~~~~~~~~g~~~~~Tp~~---~~~~al~~al--~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g-~ 294 (401)
T PLN02409 227 ------SPRVFFDWADYLKFYKLGTYWPYTPSI---QLLYGLRAAL--DLIFEEGLENVIARHARLGEATRLAVEAWG-L 294 (401)
T ss_pred ------CCCeecCHHHHHHHHhcCCCCCCCccH---HHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-C
Confidence 0001111100000 00 111245555 5667777776 566678999999999999999999999998 9
Q ss_pred EEcCC---CCccEE-EEecCC---HHHHHHHHH-HcCceeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 468 EVQGL---PFFDTV-KVKCAD---AHAIASAAY-KIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 468 ~l~~~---~~~~~v-~i~~~~---~~~i~~~L~-~~GI~~~~----~~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
+++.+ ....++ .+..+. +.++.+.|. ++||.+.. ..+..+||+.+-++|.+||.+++++|+.
T Consensus 295 ~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~ 368 (401)
T PLN02409 295 KLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEM 368 (401)
T ss_pred eeccCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHH
Confidence 98752 123333 365543 678887775 56998753 2357899999999999999999999973
No 78
>PRK02769 histidine decarboxylase; Provisional
Probab=99.86 E-value=1.7e-19 Score=208.65 Aligned_cols=284 Identities=16% Similarity=0.114 Sum_probs=199.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcc--eeEecchHHHHHHHHHHhhhh--cCCCCEEEEcCCCChhHHHHHHHhccCCCeE
Q 001579 207 QGRLESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQ--KGKKKTFIIASNCHPQTIDICITRADGFDIK 282 (1050)
Q Consensus 207 qG~le~l~e~q~~ia~L~G~~~an--asl~d~~Taa~eA~~la~~~~--~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~ 282 (1050)
+++.+...+..+++|+|+|++... ..+++|||.+. ++++... ..++++|++++.+|+++.+.++.+ ...+..
T Consensus 61 ~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean---~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~l-g~~~~~ 136 (380)
T PRK02769 61 LNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGN---LYGCYLARELFPDGTLYYSKDTHYSVSKIARLL-RIKSRV 136 (380)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHH---HHHHHHHHHhCCCcEEEeCCCceehHHHHHHHc-CCCCce
Confidence 345678888999999999997544 47788888553 3332211 126789999999999999988643 112222
Q ss_pred EEE-----cCchhhhc-cCCC---eeEEEEEcC-CCCeeEccHHHHHHHHHhCC---cEEEEEecCccccCCC-------
Q 001579 283 VVV-----SDLKDIDY-KSGD---VCGVLVQYP-GTEGEVLDYGDFIKNAHANG---VKVVMATDLLALTILK------- 342 (1050)
Q Consensus 283 v~~-----~~~~~l~~-l~~~---t~~V~v~~p-n~~G~i~di~~I~~~ah~~g---alliV~a~~~alg~l~------- 342 (1050)
+.. +|+++|++ ++++ |++|+++.+ |.+|.++|+++|+++||++| ++++|++ .++.+.+.
T Consensus 137 V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDa-A~gg~~~p~~~~~~~ 215 (380)
T PRK02769 137 ITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADA-ALSGMILPFVNNPPP 215 (380)
T ss_pred eccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEe-cccceeecccCcccc
Confidence 222 13345665 6555 889999987 67999999999999999998 6999954 23333331
Q ss_pred CCCcccceEEEecCccc-cccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCcc
Q 001579 343 PPGELGADIVVGSAQRF-GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNIC 421 (1050)
Q Consensus 343 ~pg~~GaDivvgs~k~~-g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnic 421 (1050)
-....|+|.++.++++| ++|+| .|++++++++.+.+.... .|.- ..+. ...||.|..
T Consensus 216 ~d~~~~vDsis~s~HK~~~~P~g-----~G~l~~r~~~~~~~~~~~-----------~yl~---~~d~---t~~GSR~g~ 273 (380)
T PRK02769 216 FSFADGIDSIAISGHKFIGSPMP-----CGIVLAKKKYVERISVDV-----------DYIG---SRDQ---TISGSRNGH 273 (380)
T ss_pred CCccCCCCEEEECCcccCCCCCC-----cEEEEEehhhhhhcccCc-----------cccC---CCCC---CccCCCCcH
Confidence 11223999999999555 44654 678999988777663210 0100 0011 125666654
Q ss_pred chhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCCHHHHHHHHHHcCceeee
Q 001579 422 TAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRV 501 (1050)
Q Consensus 422 t~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~i~~~L~~~GI~~~~ 501 (1050)
+.. ++.++ +.++|.+|++++.+++.++++|+.++|++.| ++++..|...+|+|..+.. ++ .+|+.+..
T Consensus 274 ~~l---~lw~a--L~~lg~~G~~~~~~~~~~la~~l~~~L~~~g-~~~~~~p~~~~v~f~~~~~-~~-----~~~w~l~~ 341 (380)
T PRK02769 274 TAL---LLWAA--IRSLGSKGLRQRVQHCLDMAQYAVDRLQANG-IPAWRNPNSITVVFPCPSE-RI-----WKKWHLAT 341 (380)
T ss_pred HHH---HHHHH--HHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCceEEEEcCCCH-HH-----HhCeeEcc
Confidence 333 33333 4789999999999999999999999999988 9988777777888876642 22 16888876
Q ss_pred ecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001579 502 VDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (1050)
Q Consensus 502 ~~~~~lris~~e~~t~edId~lv~~l~~~ 530 (1050)
. .+.++++++..+|++.||.|++.|...
T Consensus 342 ~-~~~~hi~~~~~~~~~~~~~f~~dl~~~ 369 (380)
T PRK02769 342 S-GNQAHIITMPHHNKQQIDSLIDELIFD 369 (380)
T ss_pred c-CCEEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4 458999999999999999999999743
No 79
>PLN02651 cysteine desulfurase
Probab=99.86 E-value=1.1e-19 Score=210.09 Aligned_cols=293 Identities=14% Similarity=0.167 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHHhhCCCeee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhCCCEEE
Q 001579 630 YQEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIV 705 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~---a~~~G~~vv 705 (1050)
..+.++++++.+++++|.+... +..++|+++...++.++..... .++++||++...|+++... ++..|++++
T Consensus 41 ~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~----~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~ 116 (364)
T PLN02651 41 SEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYK----DKKKHVITTQTEHKCVLDSCRHLQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc----CCCCEEEEcccccHHHHHHHHHHHhcCCEEE
Confidence 3567889999999999987532 4445566655444443322111 2457899988888765443 235799999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccC
Q 001579 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1050)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~Ga 784 (1050)
.++++++|.+|+++|+++++ +++++|++++++ .+|++. |+++|+++||++|++++||+++..+...+ .+.++|+
T Consensus 117 ~v~~~~~~~~d~~~l~~~i~---~~t~lv~v~~~~n~tG~~~-~l~~I~~~~~~~g~~~~vD~a~~~g~~~~-~~~~~~~ 191 (364)
T PLN02651 117 YLPVKSDGLVDLDELAAAIR---PDTALVSVMAVNNEIGVIQ-PVEEIGELCREKKVLFHTDAAQAVGKIPV-DVDDLGV 191 (364)
T ss_pred EEccCCCCcCCHHHHHHhcC---CCcEEEEEECCCCCceecc-cHHHHHHHHHHcCCEEEEEcchhhCCccc-CcccCCC
Confidence 99998889999999999997 789999999884 689998 89999999999999999999976443322 4567899
Q ss_pred cEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
|+++++.||++ |.+|+|++++++++...+.....|.... .+.+.+|.++.+ ...+. +.+.++.
T Consensus 192 D~~~~s~hK~~------gp~G~g~l~v~~~~~~~l~p~~~g~~~~---~~~~~GT~~~~~-----~~~l~---~al~~~~ 254 (364)
T PLN02651 192 DLMSISGHKIY------GPKGVGALYVRRRPRVRLEPLMSGGGQE---RGRRSGTENTPL-----VVGLG---AACELAM 254 (364)
T ss_pred CEEEechhhhC------CCCceEEEEEcCCCCCCCCccccCCCcc---CCccCCCccHHH-----HHHHH---HHHHHHH
Confidence 99999999963 3358999999987666654333332110 112233444331 12222 3333333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc---CCeeecCCCCc---cceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC
Q 001579 865 SKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGT---VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS 938 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~~---~~v~~~g~~g~---~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~ 938 (1050)
. +..++.++....++++.++|++. +++. ++.++ ..+.+.|.++ +++.++++++|.+ |.+..-+
T Consensus 255 ~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~--~~~~~~~~~~~i~~~~~~------~~~~~~~~~~L~~--i~v~~g~ 323 (364)
T PLN02651 255 K-EMDYDEKHMKALRERLLNGLRAKLGGVRVN--GPRDPEKRYPGTLNLSFA------YVEGESLLMGLKE--VAVSSGS 323 (364)
T ss_pred H-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEE--CCCCcccCcCCEEEEEeC------CCCHHHHHHHhCC--EEEEchh
Confidence 2 34666677788899999999753 3332 22111 1223444443 5678899999965 5543211
Q ss_pred -----------------CC---CCCEEEEEcCCCCCHHHHH
Q 001579 939 -----------------WP---VPGTLMIEPTESESKEELD 959 (1050)
Q Consensus 939 -----------------~p---v~~~lrI~~te~~t~eeid 959 (1050)
.+ ..+.+|+++..++|++|||
T Consensus 324 ~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 324 ACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred hcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 10 1378999999999999986
No 80
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.86 E-value=1e-19 Score=211.58 Aligned_cols=297 Identities=12% Similarity=0.015 Sum_probs=206.9
Q ss_pred HHHHHHHHHHHHHhcCCCC-cceeEec-chHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCe-EEEEc
Q 001579 210 LESLLNFQTMIADLTGLPM-SNASLLD-EGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDI-KVVVS 286 (1050)
Q Consensus 210 le~l~e~q~~ia~L~G~~~-anasl~d-~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi-~v~~~ 286 (1050)
.+.+.+.++.+++|+|.+. ..+.++. +||.+++++..++ +. +++.+++...+|++....+ .++.+|+ +++++
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l-~~--~~~~~vi~~g~f~~~~~~~--~~~~~g~~~v~~~ 121 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL-LG--ARRVDHLAWESFGSKWATD--VVKQLKLEDPRVL 121 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc-CC--CCcceEEEeCHHHHHHHHH--HHhhcCCCCceEe
Confidence 4678889999999999854 4688786 8999999888765 32 3333444468999865431 1244577 77776
Q ss_pred Cch-----hhhccCCCeeEEEEEc-CCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccc
Q 001579 287 DLK-----DIDYKSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRF 359 (1050)
Q Consensus 287 ~~~-----~l~~l~~~t~~V~v~~-pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~ 359 (1050)
+.+ ++++++. ++.|.+++ .|.+|.+.|+++|++ |++|++++|++ ..++|..+-.-+ .+|++++++ |+|
T Consensus 122 ~~~~g~~~d~~~i~~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa-~qs~G~~pidv~-~iD~~~~s~~K~l 196 (378)
T PRK03080 122 EADYGSLPDLSAVDF-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDA-TSAAFALPLDWS-KLDVYTFSWQKVL 196 (378)
T ss_pred ccCCCCCCCHhhcCC-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEec-ccccccCCCCHH-HCcEEEEehhhhC
Confidence 542 2222333 45577765 688999999999999 89999999954 346665532212 379999999 555
Q ss_pred cccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEeccc--ccccccccccCCCccchhHHHHHHHHHHHHH
Q 001579 360 GVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT--REQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1050)
Q Consensus 360 g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqt--req~irRekaTsnict~~~l~a~~aa~y~~~ 437 (1050)
++| ||+||+++++++++++.+...|+.. + +.+.+.. .....+++.+|.|.....+++++.+++ .+
T Consensus 197 ~~P-----~G~g~l~v~~~~~~~~~p~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al--~~ 263 (378)
T PRK03080 197 GGE-----GGHGMAILSPRAVERLESYTPARPI-----P-KFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQL--DW 263 (378)
T ss_pred CCC-----CceEEEEECHHHHHhhhcccCCCCC-----c-hhheeccchHHhhhhhcCCcccCchHHHHHHHHHHH--HH
Confidence 444 5799999999999888766655421 1 1122211 111124566787776667777777776 66
Q ss_pred hCcc-cHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--C-CCc-cEEEEecCC-----HHHHHHHHHHcCceeee--e--c
Q 001579 438 HGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG--L-PFF-DTVKVKCAD-----AHAIASAAYKIEMNLRV--V--D 503 (1050)
Q Consensus 438 ~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~--~-~~~-~~v~i~~~~-----~~~i~~~L~~~GI~~~~--~--~ 503 (1050)
+-.+ |++++.+|+.+++++++++|+++|+++++. + ... ..++|..++ ..++.+.|.++||.++. . .
T Consensus 264 l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~~~~~ 343 (378)
T PRK03080 264 ANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEPYRDA 343 (378)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHcCCeeccccccCC
Confidence 6676 899999999999999999999997567763 1 122 246666653 34567777777887753 1 2
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 504 SNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 504 ~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
.+.+|+|++.+||.+|||+|+++|+.
T Consensus 344 ~~~vRis~~~~~t~~di~~l~~al~~ 369 (378)
T PRK03080 344 PNGLRIWCGPTVEPADVEALTPWLDW 369 (378)
T ss_pred CCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999963
No 81
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.85 E-value=2e-19 Score=211.13 Aligned_cols=304 Identities=15% Similarity=0.171 Sum_probs=194.1
Q ss_pred HHHHHHHHHHHHhhCCCeee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEE--
Q 001579 632 EMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKI-- 704 (1050)
Q Consensus 632 ~~i~el~~~lael~G~d~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~v-- 704 (1050)
....++++ + +++|.+... +...+++++...+ ++... .+|. ++++|+++...|+++... ++..|+++
T Consensus 71 ~~~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~---~~~~~-~~~~-~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~ 143 (406)
T TIGR01814 71 TLDESLLK-L-RLVGAKEDEVVVMNTLTINLHLL---LASFY-KPTP-KRYKILLEAKAFPSDHYAIESQLQLHGLTVEE 143 (406)
T ss_pred hhhhhhcc-c-cccCCCCCcEEEeCCchHHHHHH---HHHhc-CCcC-CccEEEecCCCCChHHHHHHHHHHhcCCCccc
Confidence 33444444 4 889987533 3334445444332 33321 2221 234678877778764332 45678887
Q ss_pred --EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCc
Q 001579 705 --VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1050)
Q Consensus 705 --v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~ 781 (1050)
+.++.+.+|.+|++++++.+++..++|++|++++++ .+|.+. |+++|+++||++|++++||++|..+...+ ...+
T Consensus 144 ~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~-~~~~i~~~~~~~g~~~~vD~aq~~G~~~i-d~~~ 221 (406)
T TIGR01814 144 SMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLF-DMAAITRAAHAKGALVGFDLAHAVGNVPL-DLHD 221 (406)
T ss_pred ceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceec-CHHHHHHHHHHcCCEEEEEcccccCCccc-cccc
Confidence 567766678899999999987655789999999986 589998 89999999999999999999986554432 3356
Q ss_pred ccCcEEEeCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCC------------CCC-CCCCCCCCCCcchh
Q 001579 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGI------------PAP-EKSQPLGTIAAAPW 847 (1050)
Q Consensus 782 ~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~------------~~~-~~~~~t~~i~sa~~ 847 (1050)
+|+|++++++|||++ |||| |.+++++ .+....|. ..|+.... ... +.+.+|.++.
T Consensus 222 ~gvD~~~~s~hK~l~-----g~pG-~~l~v~~~~~~~~~p~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~---- 290 (406)
T TIGR01814 222 WGVDFACWCTYKYLN-----AGPG-AGAFVHEKHAHTERPR-LAGWWGHARPTRFKMDNTLGLIPCGFRISNPPIL---- 290 (406)
T ss_pred CCCCEEEEcCccccC-----CCCC-eEEEEehhhhhhcCCC-CCcccCCCCccccccccccCCCccceeeCCccHH----
Confidence 899999999999994 5677 5566543 32222221 11211100 000 0111222221
Q ss_pred hhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCC----eeecCCCCc--cceeEEEecccccccCCCCHH
Q 001579 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP----ILFRGVNGT--VAHEFIVDLRGLKNTAGIEPE 921 (1050)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~----v~~~g~~g~--~~~e~i~~~~~~~~~~g~~~~ 921 (1050)
.+....+.+..+...|+.++.++...+++|+.+.|++... +...++..+ ....+.|.++ ++.+
T Consensus 291 ----~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-------~~~~ 359 (406)
T TIGR01814 291 ----SVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-------VPGK 359 (406)
T ss_pred ----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-------CCHH
Confidence 1222344556665667888888888999999999977421 211122111 1122334432 3568
Q ss_pred HHHHHHHHCCcccCCCCCCCCCEEEEEc-CCCCCHHHHHHHHHHHHHHH
Q 001579 922 DVAKRLMDYGFHGPTMSWPVPGTLMIEP-TESESKEELDRYCDALISIR 969 (1050)
Q Consensus 922 ~vakrL~d~Gi~~~~~~~pv~~~lrI~~-te~~t~eeid~fv~aL~~i~ 969 (1050)
++.++|.++||.+... .++.+||++ +.++|++|||+++++|++++
T Consensus 360 ~~~~~L~~~gi~v~~~---~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 360 AVFQALIKRGVIGDKR---EPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred HHHHHHHHCCEEEecc---CCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 9999999999986421 247899999 58999999999999998764
No 82
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.85 E-value=2.4e-19 Score=206.35 Aligned_cols=293 Identities=16% Similarity=0.100 Sum_probs=205.1
Q ss_pred HHHHHHHHHHHHHHhcCCCCcc-eeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcC
Q 001579 209 RLESLLNFQTMIADLTGLPMSN-ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD 287 (1050)
Q Consensus 209 ~le~l~e~q~~ia~L~G~~~an-asl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~ 287 (1050)
..+.+.++++.+++++|.+..+ +.++.++|.+...++.++ . ++|++|+++...|++.. +...++..|.+++.++
T Consensus 30 ~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~-~--~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 30 FLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL-L--EPGDKVLVGVNGVFGDR--WADMAERYGADVDVVE 104 (356)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh-C--CCCCEEEEecCCchhHH--HHHHHHHhCCCeEEee
Confidence 4566788999999999996544 556777787665555444 2 37899999998887632 1112334577776664
Q ss_pred c--------hhhhc-cCC-CeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC-CCCCcccceEEEec
Q 001579 288 L--------KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-KPPGELGADIVVGS 355 (1050)
Q Consensus 288 ~--------~~l~~-l~~-~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-~~pg~~GaDivvgs 355 (1050)
. +++++ +++ ++++|++++| |.+|.+.|+++|+++||++|+++++++ .+++|.. .+..++|+|+++++
T Consensus 105 ~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~-~~~~g~~~~~~~~~~~d~~~~s 183 (356)
T cd06451 105 KPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDA-VSSLGGEPFRMDEWGVDVAYTG 183 (356)
T ss_pred cCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEee-ehhccCccccccccCccEEEec
Confidence 3 35555 665 8999999887 679999999999999999999999943 4456543 24567899999999
Q ss_pred C-ccccccCCCCCcceEEEEEehhhhhcCCC--cEEeEeecCCCCcceEEecccccccc--c-ccccCCCccchhHHHHH
Q 001579 356 A-QRFGVPMGYGGPHAAFLATSQEYKRMMPG--RIVGVSIDSSGKPALRVAMQTREQHI--R-RDKATSNICTAQALLAN 429 (1050)
Q Consensus 356 ~-k~~g~P~~~GGP~~G~la~~~~~~r~lpg--rivG~s~d~~g~~~~~l~lqtreq~i--r-RekaTsnict~~~l~a~ 429 (1050)
+ |+|+.| ++.|++++++++.+.+.. ...+ +.+.++...+.. + .+.+|.|+ ..++++
T Consensus 184 ~~K~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~t~~~---~~~~a~ 245 (356)
T cd06451 184 SQKALGAP-----PGLGPIAFSERALERIKKKTKPKG----------FYFDLLLLLKYWGEGYSYPHTPPV---NLLYAL 245 (356)
T ss_pred CchhccCC-----CCcceeEECHHHHHHHHhcCCCCc----------eeecHHHHHhhhcccCCCCCCChH---HHHHHH
Confidence 8 777655 347899999988776631 1111 122221111111 1 12333333 345555
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--CCccEE-EEecCC---HHHHHHHHHHc-Cceeeee
Q 001579 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTV-KVKCAD---AHAIASAAYKI-EMNLRVV 502 (1050)
Q Consensus 430 ~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~--~~~~~v-~i~~~~---~~~i~~~L~~~-GI~~~~~ 502 (1050)
.+++ .++..+|++++.++..++++++++.|.++| +++..+ .+...+ .+..+. ..++.++|.++ ||.+...
T Consensus 246 ~aal--~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g 322 (356)
T cd06451 246 REAL--DLILEEGLENRWARHRRLAKALREGLEALG-LKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGG 322 (356)
T ss_pred HHHH--HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecc
Confidence 5665 556667999999999999999999999987 888642 223333 244432 78899999998 9988642
Q ss_pred ----cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 503 ----DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 503 ----~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
.++.+|+|++.++|++||++++++|.
T Consensus 323 ~~~~~~~~iRis~~~~~~~e~v~~~~~~l~ 352 (356)
T cd06451 323 LGPTAGKVFRIGHMGEATREDVLGVLSALE 352 (356)
T ss_pred cccccCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 24689999999999999999999996
No 83
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.7e-19 Score=199.41 Aligned_cols=297 Identities=20% Similarity=0.270 Sum_probs=214.6
Q ss_pred HHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhCC--CEEEE
Q 001579 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCG--MKIVS 706 (1050)
Q Consensus 632 ~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~---a~~~G--~~vv~ 706 (1050)
++..-..+..++|||.+.+++||.||++++.+.++|+. .++|+|+-.+..||-|-.- ....| ++++.
T Consensus 72 ~vE~laierak~LFga~~anVQPhSGs~AN~av~~All--------~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~ 143 (413)
T COG0112 72 EVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLALL--------QPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVS 143 (413)
T ss_pred HHHHHHHHHHHHHhCCCccccCCCCchHHHHHHHHHHc--------CCCCeEecccCCCCCcccCCCCCCccceeEEeEe
Confidence 34444667888999999999999999999988877764 2568898777777755322 22223 57788
Q ss_pred EcCCCC-CCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccc---cccCCCCcc
Q 001579 707 VGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSPGYI 782 (1050)
Q Consensus 707 V~~d~~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al---~gl~~pg~~ 782 (1050)
.++|++ +.+|.|++++++.+++++ .|+.-+..+.-.+ |++++.++|++.|+.|.+|.||..++ +.+.+|-.+
T Consensus 144 Y~vd~et~~IDyD~~~k~a~e~kPK--~ii~G~SaY~r~i--d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~ 219 (413)
T COG0112 144 YGVDPETGLIDYDEVEKLAKEVKPK--LIIAGGSAYSRPI--DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH 219 (413)
T ss_pred cccccccCccCHHHHHHHHHHhCCC--EEEECcccccccc--CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc
Confidence 888855 999999999999976655 4555444454555 69999999999999999999985444 335567666
Q ss_pred cCcEEEeCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHH
Q 001579 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1050)
Q Consensus 783 GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~ 861 (1050)
+||++.+.|||| .||..|+|.+++ ++...+...++ +.+.+.|.- -.+++.+.+...
T Consensus 220 -AdvVTtTTHKTl------rGPrGG~Il~~~eel~kkin~aVF---------------Pg~qggpl~-HviAakaVa~~E 276 (413)
T COG0112 220 -ADVVTTTTHKTL------RGPRGGIILTNDEELAKKINSAVF---------------PGLQGGPLM-HVIAAKAVAFKE 276 (413)
T ss_pred -cceEeCCcccCC------CCCCceEEEeccHHHHHHhhhhcC---------------CccCCChHH-HHHHHHHHHHHH
Confidence 999999999999 589999999996 66665532221 111111111 123334444444
Q ss_pred HHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC--CC
Q 001579 862 MMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT--MS 938 (1050)
Q Consensus 862 ~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~--~~ 938 (1050)
+ -..++++.+++.+.||+.|++.|.+. |+++. .+...|.+++|+++ .+++..+..+.|.+.||.+.. +.
T Consensus 277 a-l~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvs---GgTdnHl~lVDl~~----~~~~Gk~ae~~L~~~~It~NKN~iP 348 (413)
T COG0112 277 A-LEPEFKEYAKQVVKNAKALAEALKERGFKVVS---GGTDNHLVLVDLRS----KGLTGKKAEAALERAGITVNKNAIP 348 (413)
T ss_pred H-cChhHHHHHHHHHHHHHHHHHHHHHcCCeEec---CCccceEEEEEccc----CCCCHHHHHHHHHHcCEeeccCCCC
Confidence 4 45679999999999999999999875 88764 25678999999973 367889999999999998753 33
Q ss_pred C----C-CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHHH
Q 001579 939 W----P-VPGTLMIEPTESES----KEELDRYCDALISIREE 971 (1050)
Q Consensus 939 ~----p-v~~~lrI~~te~~t----~eeid~fv~aL~~i~~e 971 (1050)
| | ++..|||-..+.++ ++|+.+..+-+.+++..
T Consensus 349 ~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 349 FDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred CCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 3 2 45779998777554 56777777666666654
No 84
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.84 E-value=6.5e-19 Score=204.32 Aligned_cols=308 Identities=14% Similarity=0.146 Sum_probs=198.5
Q ss_pred cHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEc
Q 001579 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~ 708 (1050)
|+.+.+.++++.+++++|.+.+.+ .++|.++..+.+.++. .++++|+++...|.+....+++.|++++.++
T Consensus 48 ~~~~~~~~~~e~lA~~~g~~~~~i-~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~ 118 (370)
T TIGR02539 48 ITKPPIHDFLEDLAEFLGMDEARV-THGAREGKFAVMHALC--------KEGDWVVLDGLAHYTSYVAAERAGLNVKEVP 118 (370)
T ss_pred ccchHHHHHHHHHHHHhCCCceEE-ECChHHHHHHHHHHhh--------CCCCEEEECCcccHHHHHHHHHcCCEEEEEe
Confidence 444456788888999999997655 5777776655444332 2457899988888666666788999999999
Q ss_pred CCC--CCCCCHHHHHHHHHcC----CCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCC-C
Q 001579 709 TDA--KGNINIEELRKAAEAN----RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-G 780 (1050)
Q Consensus 709 ~d~--~g~iD~e~L~~~i~~~----~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p-g 780 (1050)
.++ ++.+|+++|++++++. .+++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+. +..+ .
T Consensus 119 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~-~l~~i~~la~~~~~~livDea~~~g~--~~~~~~ 195 (370)
T TIGR02539 119 HTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP-DAGKVAKVCREKGVPLLLNCAYTVGR--MPVSAK 195 (370)
T ss_pred cCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc-CHHHHHHHHHHcCCeEEEECccccCC--cCCCHH
Confidence 863 4789999999999742 1368899999995 689988 89999999999999999999976432 2222 3
Q ss_pred cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHH
Q 001579 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1050)
Q Consensus 781 ~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1050)
.++.|+++.++||+|+. |.++|++++++++.+.+.......... .....+..+ . .. .+..+++.+
T Consensus 196 ~~~~di~v~s~sK~~~~-----~g~~G~l~~~~~~i~~l~~~~~~~~~~-----~~~~~~~~~--~-~~--~~~~~~~al 260 (370)
T TIGR02539 196 EIGADFIVGSGHKSMAA-----SGPCGVLGMSEEWEDIVLRKSRYSPVK-----EVELLGCTS--R-GA--PIVTMMASF 260 (370)
T ss_pred HcCCCEEEeeCcccccC-----CCCEEEEEECHHHHhhhcccccCCccc-----eeeeecccc--c-cc--HHHHHHHHH
Confidence 56899999999999962 234899999988776654211000000 000000111 0 01 111222222
Q ss_pred HHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccc---cCCCCHHHHHHHHHHCCcc-cC
Q 001579 861 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---TAGIEPEDVAKRLMDYGFH-GP 935 (1050)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~---~~g~~~~~vakrL~d~Gi~-~~ 935 (1050)
... .+.+.+ .++...++++++++|+++ ++++...+ ...+-+.++++.... ........+.++|.++||. +.
T Consensus 261 ~~~-~~~l~~-~~~~~~~~~~l~~~L~~~g~~~~~~~~--s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir 336 (370)
T TIGR02539 261 PHV-VERVKR-WDEEVKKTRWFVAELEDIGFIQLGQKP--KEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIR 336 (370)
T ss_pred HHH-HHHHHH-HHHHHHHHHHHHHHHHhCCcEEEccCC--CcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCcccc
Confidence 221 222322 233456678999999886 55421111 122223355431100 0011345799999999997 32
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 936 ~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
++..+.+||++. ..+++|+++++++|++++++
T Consensus 337 ---~~~~~~iRis~~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 337 ---SGQTKYFKLSVY-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred ---CCcceEEEEEec-CCCHHHHHHHHHHHHHHHHh
Confidence 233468999974 57999999999999988764
No 85
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.84 E-value=6.7e-19 Score=206.29 Aligned_cols=315 Identities=11% Similarity=0.038 Sum_probs=213.3
Q ss_pred cHHHHHHHHHHHHHHhhCCCe--eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH--HHHHhCCCEE
Q 001579 629 GYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP--ATAAMCGMKI 704 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~--~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~p--a~a~~~G~~v 704 (1050)
+..++++++++++++++|.+. ..+.+++|+++.++++ ... ..++++||+++..|..+. ..++..|+++
T Consensus 39 ~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~---~~~-----~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v 110 (401)
T PLN02409 39 AFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESAL---TNT-----LSPGDKVVSFRIGQFSLLWIDQMQRLNFDV 110 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHH---Hhc-----CCCCCEEEEeCCCchhHHHHHHHHHcCCce
Confidence 456788999999999999864 3466677766553333 221 125678999886664443 2356789999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCC-CCEEEEEEEcC-CCccccccCHHHHHHH--HHHcCCEEEEecccccccccc-CCC
Q 001579 705 VSVGTDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKI--IHDNGGQVYMDGANMNAQVGL-TSP 779 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~-~~taaV~vt~P-n~~Gv~~~di~eI~~l--a~~~G~~v~vD~A~~~al~gl-~~p 779 (1050)
+.++.+.++.+|+++|+++++++. +++++|+++++ |.+|++. |+++|+++ ||++|+++++|+++.. +.. ...
T Consensus 111 ~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~g~~~vvD~v~s~--g~~~id~ 187 (401)
T PLN02409 111 DVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTN-DLAGVRKLLDCAQHPALLLVDGVSSI--GALDFRM 187 (401)
T ss_pred EEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccC-CHHHHHHHHhhhccCcEEEEEccccc--CCccccc
Confidence 999998766789999999998421 37899999987 4689998 79999999 9999999999998643 222 123
Q ss_pred CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCC-C----ccccCC--CCCCCCCC-CCCCCCCcchhhhHH
Q 001579 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-H----PVVSTG--GIPAPEKS-QPLGTIAAAPWGSAL 851 (1050)
Q Consensus 780 g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg-~----~vg~~~--~~~~~~~~-~~t~~i~sa~~g~~~ 851 (1050)
.++|+|+++.++||||+. .||+|++++++++.+.+.. . ..++.. +....+.. ..|+++ .
T Consensus 188 ~~~~~D~~~~s~~K~l~~-----P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~--------~ 254 (401)
T PLN02409 188 DEWGVDVALTGSQKALSL-----PTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSI--------Q 254 (401)
T ss_pred cccCccEEEEcCccccCc-----CCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccH--------H
Confidence 568999999999999963 3678999999876544321 1 111000 00000000 011111 1
Q ss_pred HHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-H
Q 001579 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-D 929 (1050)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d 929 (1050)
......+.+..+..+|+.++.++...+++++.+.|++. +++..+.+.......+.+.++ .+++..++.++|. +
T Consensus 255 ~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p-----~~~~~~~l~~~l~~~ 329 (401)
T PLN02409 255 LLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVP-----EGIDSAEIVKNAWKK 329 (401)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCC-----CCCCHHHHHHHHHHh
Confidence 12223344555556788888888889999999999875 544321111111111224433 3577889998885 7
Q ss_pred CCcccCCCCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 930 YGFHGPTMSWP-VPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 930 ~Gi~~~~~~~p-v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
+||.+..-..+ ....+||+...+++.+|+.+++++|.+++.+.
T Consensus 330 ~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 330 YNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred CCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 79987543334 25789999999999999999999999987764
No 86
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.84 E-value=1.3e-19 Score=211.42 Aligned_cols=312 Identities=18% Similarity=0.204 Sum_probs=217.4
Q ss_pred CCccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHH
Q 001579 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1050)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA 243 (1050)
|...++|+|++.+|.+..+++. .+- + |.+ ++..+....|+...+.++++.+|+++|.+. +.++++|..|..+
T Consensus 106 ~FsSndYLGL~~~p~v~~a~~~-ai~-~--yG~--g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~--all~sSGy~AN~~ 177 (476)
T PLN02955 106 LFSGNDYLGLSSHPTISNAAAN-AAK-E--YGM--GPKGSALICGYTTYHRLLESSLADLKKKED--CLVCPTGFAANMA 177 (476)
T ss_pred EeeccCccCCCCCHHHHHHHHH-HHH-H--cCC--CCCCcCccccChHHHHHHHHHHHHHHCCCc--EEEECChHHHHHH
Confidence 4456789999988877777764 443 3 334 344778889999999999999999999988 7889999988777
Q ss_pred HHHHhhh-----------hcCCCCEEEEcCCCChhHHHHHHHhccCC-CeE---EEEcCchhhhc-c---CCCeeEEEEE
Q 001579 244 MAMCNNI-----------QKGKKKTFIIASNCHPQTIDICITRADGF-DIK---VVVSDLKDIDY-K---SGDVCGVLVQ 304 (1050)
Q Consensus 244 ~~la~~~-----------~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~-gi~---v~~~~~~~l~~-l---~~~t~~V~v~ 304 (1050)
++-++.. ..++++.|+.++.+|+|++..++. ++.. +.+ +.+.|+++|++ + .++.+ ++|+
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~l-s~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~-~Vv~ 255 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRL-AERQGNVEVFVYRHCDMYHLNSLLSSCKMKRK-VVVT 255 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHh-ccccCCceEEEeCCCCHHHHHHHHHhCCCCce-EEEE
Confidence 7755410 013567899999999999999874 3222 244 45667777776 4 23333 4555
Q ss_pred cC--CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCC-----cc----cceEEEecC-ccccccCCCCCcceEE
Q 001579 305 YP--GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAF 372 (1050)
Q Consensus 305 ~p--n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg-----~~----GaDivvgs~-k~~g~P~~~GGP~~G~ 372 (1050)
.+ ++.|.+.|+++|.++++++|++++| +|.++.+++..-| .+ ..||++++. |.||.. | ||
T Consensus 256 EgV~SmdGdiapL~eL~~L~~~~ga~LiV-DEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~---G----Gf 327 (476)
T PLN02955 256 DSLFSMDGDFAPMEELSQLRKKYGFLLVI-DDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH---G----GF 327 (476)
T ss_pred eCCCCCCCCcCCHHHHHHHHHHcCcEEEE-cccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc---C----ce
Confidence 54 8899999999999999999999999 5677877765422 23 468999996 998742 3 68
Q ss_pred EEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHH-HhCcccHHHHHHHHH
Q 001579 373 LATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV-YHGPEGLKTIAQRVH 451 (1050)
Q Consensus 373 la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~-~~g~~Gl~~ia~~~~ 451 (1050)
+++++++++.+ +..+.+.|+|+...+++.++...+ .+...+ ++..++++
T Consensus 328 i~gs~~~~~~l-----------------------------~~~~~~~ifStalpp~~aaa~laal~l~~~~-~~~r~~L~ 377 (476)
T PLN02955 328 IACSKKWKQLI-----------------------------QSRGRSFIFSTAIPVPMAAAAYAAVVVARKE-KWRRKAIW 377 (476)
T ss_pred eecHHHHHHHH-----------------------------HHhCCCCeecccccHHHHHHHHHHHHHHhcC-HHHHHHHH
Confidence 88888766554 112335555554443333333221 111222 34678889
Q ss_pred HHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC-HHHHHHHHHHcCceeeee-----c--CCeEEEEeccCCCHHHHHHH
Q 001579 452 GLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV-----D--SNTVTASFDETTTLEDVDKL 523 (1050)
Q Consensus 452 ~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~~i~~~L~~~GI~~~~~-----~--~~~lris~~e~~t~edId~l 523 (1050)
++++++++. .| +.+ ..|.+ ++.+..+. +.++.++|.++||++..+ + ..++|++++..||++|||+|
T Consensus 378 ~n~~~fr~~---~G-~~~-~sPI~-pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~l 451 (476)
T PLN02955 378 ERVKEFKAL---SG-VDI-SSPII-SLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKL 451 (476)
T ss_pred HHHHHHHHh---cC-CCC-CCCEE-EEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHH
Confidence 999999884 35 543 22221 33443333 778999999999998653 1 24799999999999999999
Q ss_pred HHHHhC
Q 001579 524 FIVFAG 529 (1050)
Q Consensus 524 v~~l~~ 529 (1050)
+++|..
T Consensus 452 v~~L~~ 457 (476)
T PLN02955 452 ITALSS 457 (476)
T ss_pred HHHHHH
Confidence 999963
No 87
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.84 E-value=1.5e-18 Score=203.62 Aligned_cols=348 Identities=15% Similarity=0.102 Sum_probs=221.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcC-CCccccccCCCCCCCC-CcHHHHHHHHhCCCccccc-CCChhHHhhhHHHHHHH
Q 001579 139 MKFSKFDEGLTESQMIEHMQKLASM-NKVYKSFIGMGYYNTH-VPPVILRNIMENPAWYTQY-TPYQAEIAQGRLESLLN 215 (1050)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~-n~~~~~~lG~g~~~~~-~p~~i~~~i~~~~~~~t~y-tpyq~eisqG~le~l~e 215 (1050)
..|| +++++..|++++|...-.- +..-..|.| |+.+. .|.+.. .+.+ .|-+.+ +|.. +....+.+.+
T Consensus 15 ~~~p--~~~~~~~~~~~~~~~~iyld~~a~~~~~~--~~tt~~~p~~~~-~~~~--~l~~~~~np~s---~~~~~~le~~ 84 (431)
T TIGR01788 15 YRMP--EEEMPPDAAYQLIHDELSLDGNPRLNLAT--FVTTWMEPEARK-LMDE--TINKNMIDKDE---YPQTAEIENR 84 (431)
T ss_pred ccCC--CCCCCHHHHHHHHHHHhhhcCCcceeeee--eeCCCCCHHHHH-HHHH--HHhcCCCCccc---CccHHHHHHH
Confidence 3576 6899999999999865322 111111222 12222 444432 2222 010111 2222 2223378889
Q ss_pred HHHHHHHhcCCCC--cce--eEecchHHHHHHHHHHhhhh--c-----C---CCCEEEEcCCCChhHHHHHHHhccCCCe
Q 001579 216 FQTMIADLTGLPM--SNA--SLLDEGTAAAEAMAMCNNIQ--K-----G---KKKTFIIASNCHPQTIDICITRADGFDI 281 (1050)
Q Consensus 216 ~q~~ia~L~G~~~--ana--sl~d~~Taa~eA~~la~~~~--~-----~---~gd~Vlvs~~~Hps~~~~~~~~a~~~gi 281 (1050)
.++++++++|++. ..+ .+++|||.+....+.+.+.. . + .+.+|++++.+|+++.+.++. +|+
T Consensus 85 ~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~----lg~ 160 (431)
T TIGR01788 85 CVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARY----FDV 160 (431)
T ss_pred HHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHH----cCc
Confidence 9999999999983 234 34688885443333222211 0 0 124799999999999988653 466
Q ss_pred EEEEcCc---------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhC------CcEEEEEe-cCcc-----c
Q 001579 282 KVVVSDL---------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN------GVKVVMAT-DLLA-----L 338 (1050)
Q Consensus 282 ~v~~~~~---------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~------galliV~a-~~~a-----l 338 (1050)
+++.++. ++|++ ++++|++|+++.. |.+|.++|+++|+++|+++ |++++|++ +..+ .
T Consensus 161 ~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~ 240 (431)
T TIGR01788 161 ELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVY 240 (431)
T ss_pred eeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhC
Confidence 7666654 34555 7788999999986 6799999999999999999 99999944 3211 1
Q ss_pred cCCC-CCCcccceEEEecCcccc-ccCCCCCcceEEEEEehh--hhhcC--CCcEEeEeecCCCCcceEEeccccccccc
Q 001579 339 TILK-PPGELGADIVVGSAQRFG-VPMGYGGPHAAFLATSQE--YKRMM--PGRIVGVSIDSSGKPALRVAMQTREQHIR 412 (1050)
Q Consensus 339 g~l~-~pg~~GaDivvgs~k~~g-~P~~~GGP~~G~la~~~~--~~r~l--pgrivG~s~d~~g~~~~~l~lqtreq~ir 412 (1050)
+-+. +....|+|.+..++++|+ +|. +.|+++++++ +.+.+ ....+|.. ...+.+.. -|
T Consensus 241 ~~~~~~~~~~~~DSis~s~HK~~~~P~-----g~G~l~~r~~~~l~~~~~~~~~yl~~~-----~~~~t~~~------sR 304 (431)
T TIGR01788 241 PDLEWDFRLPRVKSINVSGHKYGLVYP-----GVGWVIWRDEEALPEELIFHVNYLGGD-----EPTFTLNF------SR 304 (431)
T ss_pred CCchhhcCCCCceEEEECchhccCCCC-----CcEEEEEeChHHcchhheecccccCCC-----CCCcceec------Cc
Confidence 1111 113458999999997764 454 4688999875 22222 11122210 00011111 11
Q ss_pred ccccCCCccchhHHHHHHHHHH--HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCccEEEEecC-----C
Q 001579 413 RDKATSNICTAQALLANMAAMY--AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA-----D 484 (1050)
Q Consensus 413 RekaTsnict~~~l~a~~aa~y--~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~~~~~v~i~~~-----~ 484 (1050)
+ +.-++ ++| +..+|.+|++++.+++.+++++|+++|++.++++++.+ +.+..|+|+.+ +
T Consensus 305 ~-----------g~~al--~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~ 371 (431)
T TIGR01788 305 P-----------ANQVI--AQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPG 371 (431)
T ss_pred h-----------HHHHH--HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCC
Confidence 1 11011 133 46889999999999999999999999999977999875 56777888754 2
Q ss_pred --HHHHHHHHHHcCceeeee-c------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 485 --AHAIASAAYKIEMNLRVV-D------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 485 --~~~i~~~L~~~GI~~~~~-~------~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
..++.++|.++||.+... . .-.+|+++....+++.+++|++.|+.
T Consensus 372 ~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~ 425 (431)
T TIGR01788 372 YTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEA 425 (431)
T ss_pred cCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHH
Confidence 578999999999975321 1 13589999999999999999999974
No 88
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.84 E-value=1.1e-18 Score=203.44 Aligned_cols=306 Identities=16% Similarity=0.167 Sum_probs=196.0
Q ss_pred HHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcC--
Q 001579 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT-- 709 (1050)
Q Consensus 632 ~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~-- 709 (1050)
..+.++++.+++++|.+.+.+ .++|++|..+++.++ . .++++|+++...|.+....++..|++++.++.
T Consensus 63 ~~~~~l~~~lA~~~g~~~~~~-~~g~t~a~~~al~~l---~-----~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~ 133 (387)
T PRK09331 63 PPIADFHEDLAEFLGMDEARV-THGAREGKFAVMHSL---C-----KKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTG 133 (387)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-eCCHHHHHHHHHHHh---c-----CCCCEEEECCCchHHHHHHHHHcCCEEEEEeCcc
Confidence 357799999999999987644 566666664444332 1 24578999988887666667889999999998
Q ss_pred CCCCCCCHHHHHHHHHcC----CCCEEEEEEEcCCC-ccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccC
Q 001579 710 DAKGNINIEELRKAAEAN----RDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~----~~~taaV~vt~Pn~-~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~Ga 784 (1050)
++++.+|+++|+++++++ .+++++|++++|++ +|.+. |+++|+++||++|+++++|+++..+...+ ...++|+
T Consensus 134 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~-~l~~I~~la~~~g~~livD~a~~~g~~~~-~~~~~g~ 211 (387)
T PRK09331 134 YPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLA-DAKKVAKVAHEYGIPFLLNGAYTVGRMPV-DGKKLGA 211 (387)
T ss_pred CcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccc-cHHHHHHHHHHcCCEEEEECCcccCCcCC-CHHHcCC
Confidence 667889999999999753 24799999999964 89998 89999999999999999999875432222 2235799
Q ss_pred cEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCC-CCCcchhhhHHHHHHHHHHHHHH
Q 001579 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSALILPISYTYIAMM 863 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~-~i~sa~~g~~~~~~~a~a~l~~l 863 (1050)
|++++++||+|+ +++|+|++++++++.+.+......... ......+ .... .+.. ..++.+..+
T Consensus 212 D~~~~s~~K~l~-----~~~~~G~l~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~----~~~~--~~~aal~~~ 275 (387)
T PRK09331 212 DFIVGSGHKSMA-----ASAPSGVLATTEEYADKVFRTSRKFGV-----KEVELLGCTLRG----APLV--TLMASFPHV 275 (387)
T ss_pred CEEEeeCccccc-----CCCCEEEEEECHHHHhhcccccCCCcc-----cceeeeceecCc----hHHH--HHHHHHHHH
Confidence 999999999995 456789999998766554211000000 0000000 1110 1111 111222222
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEeccccc---ccCCCCHHHHHHHHHHCCcccCCCC
Q 001579 864 GSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLK---NTAGIEPEDVAKRLMDYGFHGPTMS 938 (1050)
Q Consensus 864 G~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~---~~~g~~~~~vakrL~d~Gi~~~~~~ 938 (1050)
-.. +. ..++...++++++++|+++ +++.-.++ ...+.+.++.+.+. ...+.+...+.++|.++||..-.
T Consensus 276 ~~~-~~-~~~~~~~~~~~l~~~L~~l~g~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~-- 349 (387)
T PRK09331 276 VER-VK-RWDEEVKKARWFVDELEKIEGFKQLGEKP--RNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIK-- 349 (387)
T ss_pred HHH-HH-HHHHHHHHHHHHHHHHhcCCCEEEeccCc--CcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEc--
Confidence 111 22 2344567888999999876 44431111 11111224432110 01123456799999999997311
Q ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 939 WPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 939 ~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
+..+.++...+..+|++|+|+++++|++++++
T Consensus 350 -~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 350 -PGATKEFKLSTYGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred -cCCceEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 22244444444557999999999999998775
No 89
>PRK14012 cysteine desulfurase; Provisional
Probab=99.84 E-value=1.7e-18 Score=203.12 Aligned_cols=311 Identities=13% Similarity=0.146 Sum_probs=198.2
Q ss_pred HHHHHHHHHHHHhhCCCee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHH---HhCCCEEEEE
Q 001579 632 EMFNNLGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSV 707 (1050)
Q Consensus 632 ~~i~el~~~lael~G~d~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a---~~~G~~vv~V 707 (1050)
+.+.++++.+++++|.+.. .+..++|+++...++.++..+.. .++++||++...|.++...+ +..|++++.+
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~----~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v 124 (404)
T PRK14012 49 EAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQ----KKGKHIITSKTEHKAVLDTCRQLEREGFEVTYL 124 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhc----CCCCEEEEecCccHHHHHHHHHHHhCCCEEEEE
Confidence 5688899999999998753 34556677666544444432111 24578999888776664443 3469999999
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcE
Q 001579 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1050)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv 786 (1050)
+.+++|.+|+++|+++|+ +++++|+++++ |.+|.+. |+++|.++||++|+++++|+++..+... .....+++|+
T Consensus 125 ~~~~~g~~d~~~l~~~i~---~~t~lv~~~~~~n~tG~~~-~~~~I~~la~~~g~~vivD~a~~~g~~~-~~~~~~~~D~ 199 (404)
T PRK14012 125 DPQSNGIIDLEKLEAAMR---DDTILVSIMHVNNEIGVIQ-DIAAIGEICRERGIIFHVDAAQSVGKVP-IDLSKLKVDL 199 (404)
T ss_pred ccCCCCcCCHHHHHHhcC---CCCEEEEEECcCCCccchh-hHHHHHHHHHHcCCEEEEEcchhcCCcc-cCcccCCCCE
Confidence 999889999999999997 78999999988 5689998 7999999999999999999997533221 1234578999
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+++++||.+ |.+|.|+++++++....+.....|.... .+.+.++.++. ....+..+...+ ..
T Consensus 200 ~~~s~~K~~------gp~g~G~l~~~~~~~~~~~~~~~g~~~~---~~~~~gt~~~~-----~~~~l~~al~~~----~~ 261 (404)
T PRK14012 200 MSFSAHKIY------GPKGIGALYVRRKPRVRLEAQMHGGGHE---RGMRSGTLPTH-----QIVGMGEAARIA----KE 261 (404)
T ss_pred EEEehhhcc------CCCceEEEEEecCCCCCCCceecCCCcc---CCccCCCcCHH-----HHHHHHHHHHHH----Hh
Confidence 999999955 2236789988875433221111121100 00111122211 111111222222 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeecCC-CCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-------
Q 001579 867 GLTEASKIAILNANYMAKRLEKHYPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS------- 938 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~-~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~------- 938 (1050)
++.+..++...+++++.+.|+++..+...+. .....+.+.+.+.. .+.+++.+.|.+.++......
T Consensus 262 ~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~i~~g~~~~~~~~~~ 335 (404)
T PRK14012 262 EMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNY------VEGESLIMALKDLAVSSGSACTSASLEP 335 (404)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeC------cCHHHHHHhCCCeEEEchhhhCCCCCCC
Confidence 4555667777888999999987532322121 11112222333321 234577777754443221100
Q ss_pred ------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001579 939 ------WPV-----PGTLMIEPTESESKEELDRYCDALISIREEIAQI 975 (1050)
Q Consensus 939 ------~pv-----~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~~ 975 (1050)
+|+ .+.+|++++..+|++|+|+++++|++++++++..
T Consensus 336 ~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~~~ 383 (404)
T PRK14012 336 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLREL 383 (404)
T ss_pred CHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 111 3789999999999999999999999999887653
No 90
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.84 E-value=1.2e-18 Score=201.26 Aligned_cols=318 Identities=14% Similarity=0.119 Sum_probs=212.7
Q ss_pred cCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCc--ceeEecchHHHHHHHHHHh
Q 001579 171 IGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCN 248 (1050)
Q Consensus 171 lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~a--nasl~d~~Taa~eA~~la~ 248 (1050)
.+.| |..+++.+++.+.. .| .. +.++ ..+.+.+.++.+++|+|.+.. ++.++.++|.++++++.++
T Consensus 7 ~~pg--p~~~~~~v~~~~~~--~~-~~---~~~~----~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l 74 (363)
T TIGR02326 7 LTPG--PLTTSRTVKEAMLF--DW-CT---WDSD----YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA 74 (363)
T ss_pred ecCC--CCCCCHHHHHHhCC--CC-CC---CChH----HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc
Confidence 3566 66777777644433 23 22 2222 445678889999999999764 6888899999988887765
Q ss_pred hhhcCCCCE-EEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cC--CCeeEEEEEcC-CCCeeEccH
Q 001579 249 NIQKGKKKT-FIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDY 315 (1050)
Q Consensus 249 ~~~~~~gd~-Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~--~~t~~V~v~~p-n~~G~i~di 315 (1050)
. . ++++ |+++...|+.... ..++..|++++.++. +++++ +. ++++.|.+.++ |.+|.+.|+
T Consensus 75 ~-~--~~~~vlv~~~~~~~~~~~---~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i 148 (363)
T TIGR02326 75 V-P--KDGKLLVVINGAYGARIV---QIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPI 148 (363)
T ss_pred C-C--CCCeEEEEeCChhhHHHH---HHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcH
Confidence 2 2 4454 5667788876532 224456888777654 34544 43 35666766664 789999999
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeec
Q 001579 316 GDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1050)
Q Consensus 316 ~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d 393 (1050)
++|+++||++|++++|++ ..++|... +..++|+|++++++ |+|++ +||+||++++++.++++.+...+
T Consensus 149 ~~I~~l~~~~g~~livD~-~~~~g~~~~~~~~~~~D~~~~s~~K~l~~-----p~G~G~l~~~~~~~~~~~~~~~~---- 218 (363)
T TIGR02326 149 EAVAKLAHRHGKVTIVDA-MSSFGGIPIDIAELHIDYLISSANKCIQG-----VPGFGFVIARQAELAACKGNARS---- 218 (363)
T ss_pred HHHHHHHHHcCCEEEEEc-cccccCcccchhhcCccEEEecCcccccc-----CCcceEEEECHHHHHHhhcCCCc----
Confidence 999999999999999953 45666543 34678999999999 66754 45689999999877665332211
Q ss_pred CCCCcceEEecccccccccc----cccCCCccchhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 001579 394 SSGKPALRVAMQTREQHIRR----DKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 394 ~~g~~~~~l~lqtreq~irR----ekaTsnict~~~l~a~~aa~y~~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
+.+.+....+.... ..-|.|+ ...+++.+++ .++..+ |++++.+++.++..++++.|+++| ++
T Consensus 219 ------~~~~~~~~~~~~~~~~~~~~ft~~~---~~~~al~~al--~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~ 286 (363)
T TIGR02326 219 ------LSLDLYDQWRCMEDNHGKWRFTSPT---HVVHAFAQAL--LELEKEGGVAARHQRYQQNQKTLVAGMRALG-FE 286 (363)
T ss_pred ------eeecHHHHHHHHhccCCCCCCCCcH---HHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-Ce
Confidence 22221100000000 0113332 3455555555 333333 689999999999999999999998 88
Q ss_pred EcCCC--CccE-EEEecCC-----HHHHHHHHHHcCceeeee---cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 469 VQGLP--FFDT-VKVKCAD-----AHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 469 l~~~~--~~~~-v~i~~~~-----~~~i~~~L~~~GI~~~~~---~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
++.++ .... +.|..+. ..++.+.|.++||.++.. ..+.+|++++-++|.+|+++++++|+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~ 357 (363)
T TIGR02326 287 PLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIG 357 (363)
T ss_pred eccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 76432 2222 3344432 478999999999998643 14689999988899999999999986
No 91
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.84 E-value=1.2e-18 Score=201.32 Aligned_cols=316 Identities=12% Similarity=0.100 Sum_probs=201.7
Q ss_pred HHHHHHHHHHHHHHhhCCCe---eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCcc-HHHHHhCCCEEE
Q 001579 630 YQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN-PATAAMCGMKIV 705 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~---~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~-pa~a~~~G~~vv 705 (1050)
+.+.++++++.+++++|.+. ..+...+|++|..+.+.++. .+ +++.+++....|+.. ...++..|++++
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~----~~---~~~vlv~~~~~~~~~~~~~a~~~g~~~~ 105 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV----PK---DGKLLVVINGAYGARIVQIAEYLGIPHH 105 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC----CC---CCeEEEEeCChhhHHHHHHHHHcCCceE
Confidence 55678899999999999974 23455667766654443321 11 223444455555443 233677899999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccC-CCCccc
Q 001579 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIG 783 (1050)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~-~pg~~G 783 (1050)
.+++++++.+|+++++++++++ ++++.+.++++ +.+|+.. |+++|+++||++|+++++|+++. ++... ...+++
T Consensus 106 ~v~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~i~~I~~l~~~~g~~livD~~~~--~g~~~~~~~~~~ 181 (363)
T TIGR02326 106 VVDTGEVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILN-PIEAVAKLAHRHGKVTIVDAMSS--FGGIPIDIAELH 181 (363)
T ss_pred EEeCCCCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccC-cHHHHHHHHHHcCCEEEEEcccc--ccCcccchhhcC
Confidence 9999888999999999999743 35666777765 5689998 79999999999999999998864 33321 224679
Q ss_pred CcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCC---C-CCCCCCCCCCCcchhhhHHHHHHHHHH
Q 001579 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIP---A-PEKSQPLGTIAAAPWGSALILPISYTY 859 (1050)
Q Consensus 784 aDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~---~-~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1050)
+|++++++||+|+ |+||+|++++++++...+.+...+...+.. . ............+ .. ...+..+.
T Consensus 182 ~D~~~~s~~K~l~-----~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~---~~-~~~al~~a 252 (363)
T TIGR02326 182 IDYLISSANKCIQ-----GVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSP---TH-VVHAFAQA 252 (363)
T ss_pred ccEEEecCccccc-----cCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCc---HH-HHHHHHHH
Confidence 9999999999994 557899999997665443221111100000 0 0000000000111 11 11222333
Q ss_pred HHHHChh-hHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccce-eEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 001579 860 IAMMGSK-GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAH-EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1050)
Q Consensus 860 l~~lG~e-Gl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~-e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~ 936 (1050)
+..+..+ |+.++.++...+++++.+.|++. +++... + ....+ ...+.+++ ....+..++.+.|.++||.+..
T Consensus 253 l~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~-~-~~~~~~~~~~~~~~---~~~~~~~~v~~~L~~~gi~v~~ 327 (363)
T TIGR02326 253 LLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLD-D-EIQSPIITSFYSPE---DPDYRFADFYQRLKEQGFVIYP 327 (363)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccC-c-ccCCceEEEEECCC---CCCCCHHHHHHHHHHCCEEEEC
Confidence 4444344 57777788888999999999876 554321 1 11111 12233331 0124667899999999998743
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 937 MSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 937 ~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
...+..+.+||++...++.+|+++++++|++++.
T Consensus 328 g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 328 GKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred CcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 2211247899998778899999999999988753
No 92
>PLN02271 serine hydroxymethyltransferase
Probab=99.83 E-value=9.1e-19 Score=204.96 Aligned_cols=311 Identities=16% Similarity=0.141 Sum_probs=213.3
Q ss_pred HHHHHHHHHHHHhhCCCe----eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---------HH
Q 001579 632 EMFNNLGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---------AA 698 (1050)
Q Consensus 632 ~~i~el~~~lael~G~d~----~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~---------a~ 698 (1050)
++..-.++..+++||.+. +++||.||+.|+.+.++++. .++|+|+..+..||.|... +.
T Consensus 194 ~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl--------~PGD~IL~ldl~~GGHlshg~~~~~g~~vs 265 (586)
T PLN02271 194 QIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLL--------LPGDRIMGLDSPSGGHMSHGYYTPGGKKVS 265 (586)
T ss_pred HHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhc--------CCCCEEEEecCCCCCchhcccccccccccc
Confidence 444445677888999886 88999999999987777653 2568999878888877543 23
Q ss_pred hCCCEEEEEc--CC-CCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccc
Q 001579 699 MCGMKIVSVG--TD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG 775 (1050)
Q Consensus 699 ~~G~~vv~V~--~d-~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~g 775 (1050)
..|+.+..++ +| ++|.+|+++|++.+.+ .++++|++...++.-.+ |+++|+++|+++|+++++|+||..++..
T Consensus 266 ~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~--~rPKLII~g~Saypr~~--D~~~i~eIAdevGA~LmvD~AH~aGLIa 341 (586)
T PLN02271 266 GASIFFESLPYKVNPQTGYIDYDKLEEKALD--FRPKILICGGSSYPREW--DYARFRQIADKCGAVLMCDMAHISGLVA 341 (586)
T ss_pred cccceEEEEEcccccccCccCHHHHHHHhhh--cCCeEEEECchhccCcC--CHHHHHHHHHHcCCEEEEECcccccccc
Confidence 4565544444 65 4599999999996542 78888888654443222 7999999999999999999999766553
Q ss_pred c---CCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCC----CCCC-CCCCCcchh
Q 001579 776 L---TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPE----KSQP-LGTIAAAPW 847 (1050)
Q Consensus 776 l---~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~----~~~~-t~~i~sa~~ 847 (1050)
. ..|.. ++|+++++.||||. ||..|+|++++...+...|...++..+..+.. -.++ .+...+.+.
T Consensus 342 ~g~~~sP~~-~aDvvt~TTHKtLr------GPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGph 414 (586)
T PLN02271 342 AKECVNPFD-YCDIVTSTTHKSLR------GPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPH 414 (586)
T ss_pred cCcCCCCCc-CCcEEEeCCcccCC------CCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChh
Confidence 2 23433 69999999999994 67668899987766655554433322110000 0011 122222233
Q ss_pred hhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHH
Q 001579 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1050)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakr 926 (1050)
.+. +++.|.+. +......+++.+++.+.||+.|++.|.+. |+++.. |...|.+++|+++ .|++...+.+.
T Consensus 415 n~~-IAalAval-kea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv~g---gTdnHlvLvDl~~----~g~~G~~ae~~ 485 (586)
T PLN02271 415 NNH-IAALAIAL-KQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTG---GTDNHLLLWDLTT----LGLTGKNYEKV 485 (586)
T ss_pred HHH-HHHHHHHH-HHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEeeC---CCCcceeeecCcc----cCCCHHHHHHH
Confidence 332 33333333 33333346889999999999999999875 888753 4567889999975 36788899999
Q ss_pred HHHCCcccCC--CCC---C-CCCEEEEEcCCCCC----HHHHHHHHHHHHHHHH
Q 001579 927 LMDYGFHGPT--MSW---P-VPGTLMIEPTESES----KEELDRYCDALISIRE 970 (1050)
Q Consensus 927 L~d~Gi~~~~--~~~---p-v~~~lrI~~te~~t----~eeid~fv~aL~~i~~ 970 (1050)
|.+-||.+.. +.+ | .++.|||...+.++ ++|+++..+.|.++++
T Consensus 486 Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 486 CEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 9999998753 222 1 35779998777544 5788887777777766
No 93
>PRK14012 cysteine desulfurase; Provisional
Probab=99.83 E-value=2.2e-18 Score=202.19 Aligned_cols=290 Identities=15% Similarity=0.135 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhh-hhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc
Q 001579 210 LESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL 288 (1050)
Q Consensus 210 le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~-~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~ 288 (1050)
-+.+.++++.+++++|.+..++.+.+++|.+...++.++. ...++||+|+++..+|+++...++.. +..|++++.++.
T Consensus 48 ~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v~~ 126 (404)
T PRK14012 48 EEAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLDP 126 (404)
T ss_pred HHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEEcc
Confidence 3568889999999999988889899999988776655432 11237899999999999999888654 345888887754
Q ss_pred --------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecCc
Q 001579 289 --------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQ 357 (1050)
Q Consensus 289 --------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~k 357 (1050)
+++++ +++++++|+++++ |.+|.+.|+++|.++||++|+++++++ ..++|... +..++++|+++++++
T Consensus 127 ~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~-a~~~g~~~~~~~~~~~D~~~~s~~ 205 (404)
T PRK14012 127 QSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDA-AQSVGKVPIDLSKLKVDLMSFSAH 205 (404)
T ss_pred CCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEc-chhcCCcccCcccCCCCEEEEehh
Confidence 34555 7788999999886 789999999999999999999999943 34566443 446789999999995
Q ss_pred cccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHH
Q 001579 358 RFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY 437 (1050)
Q Consensus 358 ~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~ 437 (1050)
++.+| ++.|+++++++...++.+.+.|.. . ..+.+.+|.|+. .+.++.+++-..
T Consensus 206 K~~gp-----~g~G~l~~~~~~~~~~~~~~~g~~------~-----------~~~~~~gt~~~~---~~~~l~~al~~~- 259 (404)
T PRK14012 206 KIYGP-----KGIGALYVRRKPRVRLEAQMHGGG------H-----------ERGMRSGTLPTH---QIVGMGEAARIA- 259 (404)
T ss_pred hccCC-----CceEEEEEecCCCCCCCceecCCC------c-----------cCCccCCCcCHH---HHHHHHHHHHHH-
Confidence 45333 247889988765434433333311 0 012356787773 344555554222
Q ss_pred hCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-C-C-cc--EEEEecCCHHHHHHHHHHcCceee----e-------
Q 001579 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-P-F-FD--TVKVKCADAHAIASAAYKIEMNLR----V------- 501 (1050)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~-~-~~--~v~i~~~~~~~i~~~L~~~GI~~~----~------- 501 (1050)
..++.++.++...+++++.+.|+++.++++.+. . . .. .+.+...+..++.+.|.+.+|... .
T Consensus 260 --~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~ 337 (404)
T PRK14012 260 --KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSY 337 (404)
T ss_pred --HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCHHHHHHhCCCeEEEchhhhCCCCCCCCH
Confidence 336777889999999999999998754776532 1 1 12 244443334567666653333211 0
Q ss_pred ----------ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 502 ----------VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 502 ----------~~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
...+.||+|++.++|++|+|+++++|+.
T Consensus 338 ~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~ 375 (404)
T PRK14012 338 VLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRK 375 (404)
T ss_pred HHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 1247899999999999999999999963
No 94
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.83 E-value=1.3e-18 Score=199.60 Aligned_cols=313 Identities=12% Similarity=0.136 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHHhhCCCee--e-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCc-cHHHHHhCCCEE
Q 001579 630 YQEMFNNLGEWLCTITGFDSF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGT-NPATAAMCGMKI 704 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~~--~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vl-ip~saHgt-~pa~a~~~G~~v 704 (1050)
+.+...++++.+++++|.+.. . +...+|++|..+.+.++. .++++++ +....++. ....++..|.++
T Consensus 29 ~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--------~~~~~vi~~~~~~~~~~~~~~a~~~g~~~ 100 (355)
T TIGR03301 29 FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--------PRDGKLLVLINGAYGERLAKICEYLGIPH 100 (355)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--------CCCCeEEEECCCchhhHHHHHHHHcCCce
Confidence 447788999999999999742 2 345566666644443321 1234544 44444443 234467899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccC-CCCcc
Q 001579 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYI 782 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~-~pg~~ 782 (1050)
+.++.+.++.+|++++++.++++ ++++.++++++ +.+|++. ++++|+++|+++|+++++|+++. ++... ...++
T Consensus 101 ~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~livD~~~s--~g~~~~~~~~~ 176 (355)
T TIGR03301 101 TDLNFSEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILN-PLEAIAKVARSHGAVLIVDAMSS--FGAIPIDIEEL 176 (355)
T ss_pred EEEecCCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchh-HHHHHHHHHHHcCCEEEEEeccc--cCCcccchhhc
Confidence 99998877889999999999753 46777777776 4689988 79999999999999999998753 33221 23467
Q ss_pred cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCC---CCC-CCCCCCCCCCcchhhhHHHHHHHHH
Q 001579 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAP-EKSQPLGTIAAAPWGSALILPISYT 858 (1050)
Q Consensus 783 GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~---~~~-~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1050)
+.|++++++||+|+ |+||+|++++++++.+.+.+.......+. ..+ .+...+.. .. +.....++.+
T Consensus 177 ~~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-t~----~~~~~~a~~~ 246 (355)
T TIGR03301 177 DVDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRF-TP----PTHTVYAFAQ 246 (355)
T ss_pred CccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCC-CC----cHHHHHHHHH
Confidence 89999999999984 56789999999876654432111000000 000 00000111 11 1122233445
Q ss_pred HHHHHChhh-HHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 001579 859 YIAMMGSKG-LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1050)
Q Consensus 859 ~l~~lG~eG-l~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~ 936 (1050)
.+..+..+| +.+..++...+++++.+.|++. +++..+....... .+.+.++. ....+..++.++|.++||.+..
T Consensus 247 al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~l~~~gi~i~~ 322 (355)
T TIGR03301 247 ALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPI-IVSFLYPD---DPDFDFDDFYQELKERGFVIYP 322 (355)
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCc-EEEEECCC---CCcchHHHHHHHHHHCCEEEEC
Confidence 566665565 7777777788899999999875 4443221100011 12344331 0113567899999999998754
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 937 MSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 937 ~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
...+..+.+||++...++++|+++++++|+++
T Consensus 323 ~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 323 GKLTLADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred CccccccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 33222378999998889999999999999865
No 95
>PLN03032 serine decarboxylase; Provisional
Probab=99.83 E-value=2.4e-18 Score=197.94 Aligned_cols=281 Identities=12% Similarity=0.041 Sum_probs=192.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcce--eEecchHHHHHHHHHHhhhhc--CCCCEEEEcCCCChhHHHHHHHhccCCCeE
Q 001579 207 QGRLESLLNFQTMIADLTGLPMSNA--SLLDEGTAAAEAMAMCNNIQK--GKKKTFIIASNCHPQTIDICITRADGFDIK 282 (1050)
Q Consensus 207 qG~le~l~e~q~~ia~L~G~~~ana--sl~d~~Taa~eA~~la~~~~~--~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~ 282 (1050)
..+.+.+.+..+++++|+|+++..+ .+++|||.+ .++++...+ .++.+|+++..+|+++.+.++.+ |++
T Consensus 62 ~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEa---Nl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~l----g~~ 134 (374)
T PLN03032 62 VHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEG---NLHGILVGREVFPDGILYASRESHYSVFKAARMY----RME 134 (374)
T ss_pred ccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHH---HHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHc----CCC
Confidence 3567888899999999999987654 888999854 444432211 14568999999999999987643 344
Q ss_pred EEEcC--------chhhhc-cCC---CeeEEEEEcC-CCCeeEccHHHHHHHHHhCC-----cEEEEEecCccccCCC--
Q 001579 283 VVVSD--------LKDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-----VKVVMATDLLALTILK-- 342 (1050)
Q Consensus 283 v~~~~--------~~~l~~-l~~---~t~~V~v~~p-n~~G~i~di~~I~~~ah~~g-----alliV~a~~~alg~l~-- 342 (1050)
++.++ +++|++ +++ ++.+|+++.. |.+|.|+|+++|+++|+++| ++++|++- ++.+.+.
T Consensus 135 ~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA-~gg~~~p~~ 213 (374)
T PLN03032 135 AVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGA-LFGLMMPFV 213 (374)
T ss_pred CeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEcc-chhhhhhcc
Confidence 44443 245665 544 4778888876 67999999999999999997 48999541 2222221
Q ss_pred --C---CCcccceEEEecCccccc-cCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEeccccccccccccc
Q 001579 343 --P---PGELGADIVVGSAQRFGV-PMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKA 416 (1050)
Q Consensus 343 --~---pg~~GaDivvgs~k~~g~-P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irReka 416 (1050)
. ....++|.+..++++|++ |++ +|++.+++++.+.+.-. ..|--. ..
T Consensus 214 ~~~~~~~~~~~vDSis~s~HK~~g~P~g-----~G~ll~r~~~~~~~~~~-----------~~Yl~~---~d-------- 266 (374)
T PLN03032 214 SRAPEVTFRKPIGSVSVSGHKFLGCPMP-----CGVALTRKKHVKALSQN-----------VEYLNS---RD-------- 266 (374)
T ss_pred CCCcccCCCcCCcEEEECcccccCCCcC-----eEEEEEEchhhHhhccC-----------CcccCC---CC--------
Confidence 0 123589999999966654 764 67889998776655211 001000 00
Q ss_pred CCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCCHHHHHHHHHHcC
Q 001579 417 TSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIE 496 (1050)
Q Consensus 417 Tsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~i~~~L~~~G 496 (1050)
.+-.||-.+..++..-+.+.++|.+|++++.+++.++|+++.++|++.| ++++..|...+|+|..+.... + .+|
T Consensus 267 ~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~p~~~~V~f~~~~~~~----~-~~~ 340 (374)
T PLN03032 267 ATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAG-LTCRLNELSSTVVFERPMDEA----F-IKK 340 (374)
T ss_pred CcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEECCCceEEEEcCCCcHh----H-hhe
Confidence 0011111122222222235899999999999999999999999999988 887755666678887664222 2 258
Q ss_pred ceeeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 497 MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 497 I~~~~~~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
+.+.. ..+.++++++..+|++.||+|++.|..
T Consensus 341 w~l~~-~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 341 WQLAC-EGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred eeecc-cCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 88875 346899999999999999999999863
No 96
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.83 E-value=4e-18 Score=197.34 Aligned_cols=316 Identities=13% Similarity=0.131 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHhhCCCe--e-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCcc-HHHHHhCCCEE
Q 001579 630 YQEMFNNLGEWLCTITGFDS--F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTN-PATAAMCGMKI 704 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~--~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~-saHgt~-pa~a~~~G~~v 704 (1050)
+.+.+.++++.+++++|.+. . .+..++|++|..+.+.++. .++++++++. ..++.. ...++..|+++
T Consensus 35 ~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~~~~~g~~~ 106 (368)
T PRK13479 35 FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--------PRDGKVLVPDNGAYGARIAQIAEYLGIAH 106 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeCCchHHHHHHHHHHcCCcE
Confidence 34568899999999999863 2 3456677777655444331 1345666643 322222 14467889999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccC-CCCcc
Q 001579 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYI 782 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~-~pg~~ 782 (1050)
+.++.++++.+|+++++++++++ ++++.|.+++|+ .+|... |+++|+++||++|+++++|+++. ++... ...++
T Consensus 107 ~~i~~~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~-~~~~i~~l~~~~~~~livDa~~~--~g~~~~~~~~~ 182 (368)
T PRK13479 107 VVLDTGEDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILN-PLDEIAAVAKRHGKRLIVDAMSS--FGAIPIDIAEL 182 (368)
T ss_pred EEEECCCCCCCCHHHHHHHHHhC-CCCcEEEEEcccCcccccc-CHHHHHHHHHHcCCEEEEEcccc--cCCcccccccc
Confidence 99999877889999999999742 467788899995 589988 79999999999999999998753 33221 22457
Q ss_pred cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCC---CCCCCCCCCCCCCcchhhhHHHHHHHHHH
Q 001579 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1050)
Q Consensus 783 GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~---~~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1050)
++|++++++||+|+ |.||+|++++++++.+.+.........+. ..............+ . ..+....+.
T Consensus 183 ~~d~~v~s~~K~l~-----g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~---~-~~~~~l~~a 253 (368)
T PRK13479 183 GIDALISSANKCIE-----GVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPP---T-HVVAAFYQA 253 (368)
T ss_pred CceEEEecCccccc-----cCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCc---H-HHHHHHHHH
Confidence 89999999999984 55789999999876655433211100000 000000000001111 1 111223344
Q ss_pred HHHHChh-hHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccce-eEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 001579 860 IAMMGSK-GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAH-EFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1050)
Q Consensus 860 l~~lG~e-Gl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~-e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~ 936 (1050)
+..+..+ |+.+..++...+++++.+.|+++ +++.... ..... .+.+-++. ..+.+..++.++|.++||.+..
T Consensus 254 l~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~l~~~L~~~gi~v~~ 328 (368)
T PRK13479 254 LLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDA--EIQSPIIVTFHAPA---DPAYDFKEFYERLKEQGFVIYP 328 (368)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCc--hhcCceEEEEECCC---CCCcCHHHHHHHHHHCCEEEec
Confidence 4444333 47777778888899999999876 5443211 10111 12222221 1124678999999999999753
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 937 MSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 937 ~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
...+..+.+||+..-+++.+|+++++++|++++++
T Consensus 329 g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 329 GKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred CCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 22112368999987778999999999999998765
No 97
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.82 E-value=1.5e-18 Score=202.56 Aligned_cols=280 Identities=15% Similarity=0.175 Sum_probs=195.7
Q ss_pred HhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEE
Q 001579 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1050)
Q Consensus 205 isqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~ 284 (1050)
...|+.+...++++.+|+++|.+ ++.++.+++.+..+++.++ + ++||+|++++..|+++...++. +...++.+.
T Consensus 77 ~~~G~~~~~~~le~~ia~~~g~~--~~ii~~~~~~a~~~~~~~l-~--~~gd~vi~~~~~~~s~~~~~~~-~~~~~~~~~ 150 (393)
T TIGR01822 77 FICGTQDIHKELEAKIAAFLGTE--DTILYASCFDANGGLFETL-L--GAEDAIISDALNHASIIDGVRL-CKAKRYRYA 150 (393)
T ss_pred cccCChHHHHHHHHHHHHHhCCC--cEEEECchHHHHHHHHHHh-C--CCCCEEEEeccccHHHHHHHHh-cCCceEEeC
Confidence 44588888899999999999986 4778889987777666554 2 3899999999999999988754 444555665
Q ss_pred EcCchhhhc-cCC------CeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCC---------cc
Q 001579 285 VSDLKDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG---------EL 347 (1050)
Q Consensus 285 ~~~~~~l~~-l~~------~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg---------~~ 347 (1050)
..+++++++ +.+ +++.|++..+ |.+|.+.|+++|+++||++|++++++ +.+++|.+...+ ..
T Consensus 151 ~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~~~~~ 229 (393)
T TIGR01822 151 NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVD-ECHATGFLGPTGRGSHELCGVMG 229 (393)
T ss_pred CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEE-CCccccCcCCCCCchHHhcCCCC
Confidence 667787766 432 6777777765 78999999999999999999999994 444555442211 12
Q ss_pred cceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHH
Q 001579 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1050)
Q Consensus 348 GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l 426 (1050)
++|++++|. |.|+ |+.+|++++++++.+.+-.. ...+.+ .+|.+. ...
T Consensus 230 ~~di~~~s~sK~l~------g~r~G~~~~~~~~~~~l~~~----------~~~~~~------------~~~~~~---~~~ 278 (393)
T TIGR01822 230 RVDIITGTLGKALG------GASGGFTTARKEVVELLRQR----------SRPYLF------------SNSLPP---AVV 278 (393)
T ss_pred CCeEEEEEChHHhh------CCCcEEEEeCHHHHHHHHHh----------Ccccee------------cCCCCH---HHH
Confidence 689999997 7654 34568999988777654110 000100 111111 222
Q ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeee-
Q 001579 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV- 502 (1050)
Q Consensus 427 ~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~i~~~L~~~GI~~~~~- 502 (1050)
.+..+++ ..+ ++.+++.++..++.+++.+.|++.| +++... ....+.+..++ +.++.+.|.++||.+...
T Consensus 279 ~a~~~al--~~~--~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~ 352 (393)
T TIGR01822 279 GASIKVL--EML--EASNELRDRLWANTRYFRERMEAAG-FDIKPA-DHPIIPVMLYDAVLAQRFARRLLEEGIYVTGFF 352 (393)
T ss_pred HHHHHHH--HHH--hcCHHHHHHHHHHHHHHHHHHHHcC-CCCCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeC
Confidence 2333332 222 3466788899999999999999887 776532 12234444433 678999999999987532
Q ss_pred ----c--CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 503 ----D--SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 503 ----~--~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
. ...+|+|++.++|++||++++++|.
T Consensus 353 ~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~ 384 (393)
T TIGR01822 353 YPVVPKGQARIRVQISAAHTEEQLDRAVEAFT 384 (393)
T ss_pred CCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 1 2469999999999999999999996
No 98
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.82 E-value=2.3e-18 Score=201.15 Aligned_cols=365 Identities=16% Similarity=0.172 Sum_probs=228.3
Q ss_pred CCcccCCCCCHHHHHHHHHHHhccccCcccccccccccccCcchhhhhccccccccc---------cCCCCCchhhccc-
Q 001579 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFA---------NIHPFAPADQAQG- 629 (1050)
Q Consensus 560 ~~p~~~~~~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~---------~~~P~~p~e~~~G- 629 (1050)
.+| +.|+++..+...|.+|+..|..-...-++.|=-.-++-.. .+.+.-|. ++.-.|| .. .|
T Consensus 29 ~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~----~~~~~~~~~~hgigr~~~l~~~q~-ka-~gs 100 (444)
T TIGR03531 29 KIP--EEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSK----LVARRHYRFCHGIGRSGDLVAPQP-KA-AGS 100 (444)
T ss_pred cCC--ccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeech----hhhhcccceecCCCCcccccccCc-cc-cCc
Confidence 456 6899999999999999998855333223333110000000 01111111 1223444 22 23
Q ss_pred --HHHHHHHHHHHHHHhhCCCe--eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEE
Q 001579 630 --YQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1050)
Q Consensus 630 --~~~~i~el~~~lael~G~d~--~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv 705 (1050)
...+..++++++++++|.+. ..+..++|+. . +..+++.+.. .++ .++++||+|...|-+...++.+.|++++
T Consensus 101 s~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg-~-al~laL~alr-~~~-~~gd~VI~p~~th~S~~kAi~~~G~~pv 176 (444)
T TIGR03531 101 SLLYKLTNKLVKDFLKLLGLRSIKSAFVVPLATG-M-SLSLCLSALR-HKR-PKAKYVIWPRIDQKSCIKAISTAGFEPR 176 (444)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH-H-HHHHHHHHcC-CcC-CCCCEEEEECcChHHHHHHHHHcCCeEE
Confidence 56788999999999999982 2234444442 1 2233333211 111 1357899999888888888899999999
Q ss_pred EEcC--C-CCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCcc--ccccCHHHHHHHHHHcCCEEEEeccccccccc---cC
Q 001579 706 SVGT--D-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHG--VYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---LT 777 (1050)
Q Consensus 706 ~V~~--d-~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~G--v~~~di~eI~~la~~~G~~v~vD~A~~~al~g---l~ 777 (1050)
.|++ + +++++|+++|+++|++..+++.++++++|++++ ..+ |+++|+++|+++|+++|+|+|+.....- +.
T Consensus 177 ~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~d-dL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~ 255 (444)
T TIGR03531 177 VIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPD-DIEEIAKICANYDIPHIVNNAYGLQSNKYMELI 255 (444)
T ss_pred EeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchh-CHHHHHHHHHHcCCEEEEECcCcCcChhhhhhh
Confidence 9995 3 348999999999998433366777888887654 566 8999999999999999999987531110 00
Q ss_pred CCC-ccc-CcEEEeCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHH
Q 001579 778 SPG-YIG-ADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1050)
Q Consensus 778 ~pg-~~G-aDv~~~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1050)
.++ +.| +|++++++||+|.+|.+ .|.+.++ +++...+.... .++ ... ....
T Consensus 256 ~~g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~~y---------~g~------~~~------s~~~ 309 (444)
T TIGR03531 256 NKAIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISKSY---------PGR------ASA------SPSL 309 (444)
T ss_pred hccccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHHhc---------cCC------CCC------hHHH
Confidence 122 344 79999999999987733 3566664 44444331100 000 011 1234
Q ss_pred HHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc---C-CeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHC
Q 001579 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---Y-PILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1050)
Q Consensus 855 ~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~-~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~ 930 (1050)
.+|+.+..+|.+|+++..++..++++++.++|+++ + +.+...+..+. .+.+.+..+. +.+...+.-.|..+
T Consensus 310 ~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~i--s~~~~~~~~~---~~~~~~~g~~l~~~ 384 (444)
T TIGR03531 310 DVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPI--SSAMTLSTLK---GKDPTMLGSMLYSR 384 (444)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCce--eEEEeccccc---ccCHHHHHHHHHhC
Confidence 57888999999999999999999999999999875 1 22222222232 2334443321 34677888889888
Q ss_pred CcccC-----CC-------C---CCC------CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 931 GFHGP-----TM-------S---WPV------PGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 931 Gi~~~-----~~-------~---~pv------~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
++-.+ +- . |.. ...|.+......+++|||.|++.|.++
T Consensus 385 ~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 385 RVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred CCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 77421 11 1 110 023444444567899999999999865
No 99
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.82 E-value=1.6e-19 Score=190.49 Aligned_cols=309 Identities=15% Similarity=0.142 Sum_probs=220.6
Q ss_pred CCccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHH
Q 001579 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1050)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA 243 (1050)
|.+.+||+|...||+++.+..+ .++..+ .+|-..+...|+...+.++++.+|++-|-|. ..+|.++-.|..+
T Consensus 71 nFcaNnYLGLsshPeii~a~~~--aleeyG----aGlssvrfIcGtq~iHk~LE~kiAqfh~rED--~ilypscfdANag 142 (417)
T KOG1359|consen 71 NFCANNYLGLSSHPEIINAGQK--ALEEYG----AGLSSVRFICGTQDIHKLLESKIAQFHGRED--TILYPSCFDANAG 142 (417)
T ss_pred eecccccccccCChHHHHHHHH--HHHHhC----CCccceeEEecchHHHHHHHHHHHHHhCCCc--eEEeccccccchH
Confidence 5567899999999998888874 555322 2555667788999999999999999999987 4455554443333
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhhc-c---CCCeeEEEEEcC--CCCeeEccHHH
Q 001579 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-K---SGDVCGVLVQYP--GTEGEVLDYGD 317 (1050)
Q Consensus 244 ~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~-l---~~~t~~V~v~~p--n~~G~i~di~~ 317 (1050)
+.-|+ ..+.|-|+.++.+|.|+++.++. |+ +..++|+-+++. + .+--.-++++.. +++|.+.|+++
T Consensus 143 ~feai---l~pedAvfSDeLNhASIIdGirL-ck----ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~e 214 (417)
T KOG1359|consen 143 AFEAI---LTPEDAVFSDELNHASIIDGIRL-CK----RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEE 214 (417)
T ss_pred HHHHh---cChhhhhhccccccchhhhhhHH-Hh----hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHH
Confidence 33333 12788999999999999999865 55 344555555543 1 112234666776 78999999999
Q ss_pred HHHHHHhCCcEEEEEecCccccCCCCCC-----ccc----ceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcE
Q 001579 318 FIKNAHANGVKVVMATDLLALTILKPPG-----ELG----ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1050)
Q Consensus 318 I~~~ah~~galliV~a~~~alg~l~~pg-----~~G----aDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgri 387 (1050)
|.+++++||+|+++ ++.++.+++...| ++| +||+.++. |.+|+ -+.||..+.+.++..+
T Consensus 215 i~~La~kYgaLlfi-DecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGg------a~GGyttgp~~li~ll---- 283 (417)
T KOG1359|consen 215 ISQLAKKYGALLFI-DECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGG------ASGGYTTGPKPLISLL---- 283 (417)
T ss_pred HHHHHHhcCcEEEE-eecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcC------CCCCCccCChhHHHHH----
Confidence 99999999999999 4566777665433 244 68888886 88864 3457888777666544
Q ss_pred EeEeecCCCCcceEEecccccccccccccCCCccchhHHHHH---HHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001579 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN---MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1050)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~---~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1050)
|.++++++++++..+++ .+..|..++.. .++..+...+++++++..+..
T Consensus 284 -------------------------rqr~RpylFSnslppavV~~a~ka~dllm~s---~~~i~~~~a~~qrfr~~me~a 335 (417)
T KOG1359|consen 284 -------------------------RQRSRPYLFSNSLPPAVVGMAAKAYDLLMVS---SKEIQSRQANTQRFREFMEAA 335 (417)
T ss_pred -------------------------HhcCCceeecCCCChhhhhhhHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHhc
Confidence 34566677776655443 33445445433 456667788899999999888
Q ss_pred CCEEEcCC-CCccEEEEecCC-HHHHHHHHHHcCceeee-----ec--CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 465 GTVEVQGL-PFFDTVKVKCAD-AHAIASAAYKIEMNLRV-----VD--SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 465 G~~~l~~~-~~~~~v~i~~~~-~~~i~~~L~~~GI~~~~-----~~--~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
| |++.+. ...-++.+.... +...++.|.++||++-- ++ ..++|+.++..||+||||+++++|.
T Consensus 336 G-ftIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~ 407 (417)
T KOG1359|consen 336 G-FTISGASHPICPVMLGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFS 407 (417)
T ss_pred C-ceecCCCCCccceecccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHH
Confidence 8 999753 233355555444 88899999999998722 23 3579999999999999999999996
No 100
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.82 E-value=3e-18 Score=197.93 Aligned_cols=327 Identities=13% Similarity=0.029 Sum_probs=219.5
Q ss_pred CCCCCCCCCcHHHHHHHHhCC-CcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCc-ceeEe-cchHHHHHHHHHHh
Q 001579 172 GMGYYNTHVPPVILRNIMENP-AWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS-NASLL-DEGTAAAEAMAMCN 248 (1050)
Q Consensus 172 G~g~~~~~~p~~i~~~i~~~~-~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~a-nasl~-d~~Taa~eA~~la~ 248 (1050)
+.| |..+|+.+.+++.... +.+ ......++. .+.+.+.++.+++|+|.+.. ++.++ .+||.++++++.++
T Consensus 8 ~pG--P~~~~~~v~~a~~~~~~~~~-~~~hr~~~f----~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l 80 (361)
T TIGR01366 8 GSG--PSKVRLEQLQALTTTAASLF-GTSHRQAPV----KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL 80 (361)
T ss_pred cCC--CcCCCHHHHHHHHhcCcccc-ccCcCChHH----HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc
Confidence 455 5668888875544321 100 012234443 36788899999999999543 67776 55999999888765
Q ss_pred hhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch---hhhc-cCCCeeEEEEEc-CCCCeeEccHHHHHHHHH
Q 001579 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DIDY-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAH 323 (1050)
Q Consensus 249 ~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~---~l~~-l~~~t~~V~v~~-pn~~G~i~di~~I~~~ah 323 (1050)
- .++.++++.+.|.+....+-.++...+ ++.+++.+ +++. ++++++.|++++ +|.+|.+.|+++| +|
T Consensus 81 ~----~~~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~ 152 (361)
T TIGR01366 81 I----EKKSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPGSAPEPQADPGVDVIAWAHNETSTGVAVPVRRP---EG 152 (361)
T ss_pred c----cccccEEecCHHHHHHHHHHHhhhccC-CceEEecCCCCCCCCccCCCCCEEEEcccCCccceecccccc---cc
Confidence 2 224566777888777666544332223 44444332 3333 567899998775 6999999999998 48
Q ss_pred hCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEE
Q 001579 324 ANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRV 402 (1050)
Q Consensus 324 ~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l 402 (1050)
++|++++|++ ..++|...-.-+ .+|++++++ |.||.| |+++++++++++++++.+...|.. +.+ +.+
T Consensus 153 ~~g~~~iVDa-vqs~g~~~idv~-~~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~----~~p-~~~ 220 (361)
T TIGR01366 153 SDDALVVIDA-TSGAGGLPVDIA-ETDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGR----WVP-EFL 220 (361)
T ss_pred cCCCeEEEEc-CccccCCCCCHH-HCCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCC----CCc-hhh
Confidence 9999999954 335554322212 289999999 544433 357888999998877754333210 111 223
Q ss_pred ecccccccccccccCCCccchhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CC--Cc---
Q 001579 403 AMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LP--FF--- 475 (1050)
Q Consensus 403 ~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~~--~~--- 475 (1050)
++.... .-+.|.+|.|......++++.+++ .++..+ |++.+.+|+.+++++++++|.++|+++++. .. ..
T Consensus 221 d~~~~~-~~~~~~~t~~tp~i~~i~~l~~al--~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v 297 (361)
T TIGR01366 221 SLPTAV-DNSLKNQTYNTPAIATLALLAEQI--DWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVV 297 (361)
T ss_pred hHHHHH-hccccCCCCCCchHHHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccce
Confidence 332221 123467888888778888888887 566666 699999999999999999999997556553 11 11
Q ss_pred cEEEEecCC--HHHHHHHHHHcCceeee----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 476 DTVKVKCAD--AHAIASAAYKIEMNLRV----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 476 ~~v~i~~~~--~~~i~~~L~~~GI~~~~----~~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
.+|++. ++ ..++.+.|.++||.+.. +.++.+|+|++.++|.+||++|+++|+.
T Consensus 298 ~~v~~~-~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~ 356 (361)
T TIGR01366 298 GTIDFV-DDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDW 356 (361)
T ss_pred EEEECC-CccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHH
Confidence 234442 33 78899999999998743 2246799999999999999999999963
No 101
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.81 E-value=9.7e-18 Score=193.07 Aligned_cols=262 Identities=11% Similarity=0.104 Sum_probs=191.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhh-hcCCC-CEEEEcCCCChhHHHHHHHhccCCCeEEE
Q 001579 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNI-QKGKK-KTFIIASNCHPQTIDICITRADGFDIKVV 284 (1050)
Q Consensus 207 qG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~-~~~~g-d~Vlvs~~~Hps~~~~~~~~a~~~gi~v~ 284 (1050)
....+.+.++++.+++++|++..++.+++|+|.+++.++.++.. ...++ ++|+++..+||++...++.. +..|++++
T Consensus 38 ~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~-~~~G~~v~ 116 (353)
T TIGR03235 38 HNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRAL-ERNGFTVT 116 (353)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHH-HhcCCEEE
Confidence 33456788999999999999988899999999887776665431 11234 78999999999999988754 45688888
Q ss_pred EcCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEE
Q 001579 285 VSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVV 353 (1050)
Q Consensus 285 ~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivv 353 (1050)
.++. +++++ +++++++|+++++ |.+|.+.|+++|+++||++|++++|+ ..+++|... +..++|+|+++
T Consensus 117 ~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD-~a~~~g~~~~~~~~~~~D~~~ 195 (353)
T TIGR03235 117 YLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVD-AAQVVGKITVDLSADRIDLIS 195 (353)
T ss_pred EEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEE-chhhcCCccccccccCCCEEE
Confidence 8764 34555 6778999999987 78999999999999999999999994 345666543 34578999999
Q ss_pred ecCccccccCCCCCcceEEEEEehhhhhc--CCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHH
Q 001579 354 GSAQRFGVPMGYGGPHAAFLATSQEYKRM--MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMA 431 (1050)
Q Consensus 354 gs~k~~g~P~~~GGP~~G~la~~~~~~r~--lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~a 431 (1050)
++++++.+| |+.|+++++++.... +.+.+.| +. +..|.+.+|+|+ ..++++.+
T Consensus 196 ~s~~K~~gp-----~g~g~l~~~~~~~~~~~~~~~~~~------~~-----------~~~~~~~gt~~~---~~~~al~~ 250 (353)
T TIGR03235 196 CSGHKIYGP-----KGIGALVIRKRGKPKAPLKPIMFG------GG-----------QERGLRPGTLPV---HLIVGMGE 250 (353)
T ss_pred eehhhcCCC-----CceEEEEEccCcccccccCceeeC------CC-----------CcCccccCCCCh---HHHHHHHH
Confidence 999555434 458999999875432 3332222 10 112456788888 44556666
Q ss_pred HHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC---CccEEEEecCC--HHHHHHHHHHcCceee
Q 001579 432 AMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP---FFDTVKVKCAD--AHAIASAAYKIEMNLR 500 (1050)
Q Consensus 432 a~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~---~~~~v~i~~~~--~~~i~~~L~~~GI~~~ 500 (1050)
++ .++ .+|++++.+++.+++++++++|++.| ++++.++ ....++|..++ ++++.+.|.+ ||.++
T Consensus 251 al--~~~-~~~~~~~~~~~~~l~~~l~~~l~~~g-~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~L~~-~i~v~ 319 (353)
T TIGR03235 251 AA--EIA-RRNAQAWEVKLRAMRNQLRDALQTLG-VKLNGDPAETIPHILNFSIDGVNSEALIVNLRA-DAAVS 319 (353)
T ss_pred HH--HHH-HhhHHHHHHHHHHHHHHHHHHhccCC-eEEeCCcccccCCEEEEEeCCcCHHHHHHHHhC-CeEEE
Confidence 65 222 35889999999999999999999887 9987432 22245666565 7889999965 77765
No 102
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.81 E-value=1e-17 Score=192.25 Aligned_cols=320 Identities=14% Similarity=0.136 Sum_probs=210.0
Q ss_pred CCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCc--ceeEecchHHHHHHHHHHhh
Q 001579 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMS--NASLLDEGTAAAEAMAMCNN 249 (1050)
Q Consensus 172 G~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~a--nasl~d~~Taa~eA~~la~~ 249 (1050)
+.| |..+++.+.+.+.. .|.. +.++ ..+.+.++++++++++|++.. .+.++.+||.++++++.++.
T Consensus 4 ~p~--p~~~~~~~~~~~~~--~~~~----~~~~----~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~ 71 (355)
T TIGR03301 4 TPG--PLSTSATVRDAMLV--DWCH----WDSE----FNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV 71 (355)
T ss_pred cCC--CCCCCHHHHHHhhh--hccC----CCHH----HHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc
Confidence 445 45577777655544 2211 2222 236677889999999999864 46678899988888776542
Q ss_pred hhcCCCCE-EEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cC--CCeeEEEEEcC-CCCeeEccHH
Q 001579 250 IQKGKKKT-FIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLDYG 316 (1050)
Q Consensus 250 ~~~~~gd~-Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~--~~t~~V~v~~p-n~~G~i~di~ 316 (1050)
. ++++ |+++...|++.... .++..|++++.++. +++++ +. ++++.|++.++ |.+|.+.|++
T Consensus 72 -~--~~~~vi~~~~~~~~~~~~~---~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~ 145 (355)
T TIGR03301 72 -P--RDGKLLVLINGAYGERLAK---ICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLE 145 (355)
T ss_pred -C--CCCeEEEECCCchhhHHHH---HHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHH
Confidence 2 4555 55666777763322 23446777776643 34554 43 45667766665 7799999999
Q ss_pred HHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecC
Q 001579 317 DFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDS 394 (1050)
Q Consensus 317 ~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~ 394 (1050)
+|+++||++|++++|++ .++++... +..++|+|++++++ |+|+ |+||+||+++++++++.+.++.
T Consensus 146 ~i~~l~~~~~~~livD~-~~s~g~~~~~~~~~~~d~~~~s~~K~l~-----~~~G~g~~~~~~~~~~~~~~~~------- 212 (355)
T TIGR03301 146 AIAKVARSHGAVLIVDA-MSSFGAIPIDIEELDVDALIASANKCLE-----GVPGFGFVIARRDLLEASAGNA------- 212 (355)
T ss_pred HHHHHHHHcCCEEEEEe-ccccCCcccchhhcCccEEEecCCcccc-----cCCceeEEEECHHHHHHhhCCC-------
Confidence 99999999999999953 55666432 34678999999998 6664 4467899999999887664221
Q ss_pred CCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCccc-HHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC
Q 001579 395 SGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG-LKTIAQRVHGLAGTFALGLKKLGTVEVQGLP 473 (1050)
Q Consensus 395 ~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~G-l~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~ 473 (1050)
..+.+.+.+-.+...+...+.+..+...++++.+++ ..+..+| ++++.++..++.+++++.|+++| +++..++
T Consensus 213 ---~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al--~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~ 286 (355)
T TIGR03301 213 ---RSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQAL--EELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLLPE 286 (355)
T ss_pred ---CCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHH--HHHHHcccHHHHHHHHHHHHHHHHHHHHHcC-CeeecCC
Confidence 112222211001111111222222223444544554 3444455 89999999999999999999997 8865322
Q ss_pred -Ccc--EEEEecCC-----HHHHHHHHHHcCceeeeec---CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 474 -FFD--TVKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 474 -~~~--~v~i~~~~-----~~~i~~~L~~~GI~~~~~~---~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
... .+.+..+. ..++.++|.++||.+.... .+.+|++++.++|++|+++++++|+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~ 352 (355)
T TIGR03301 287 RWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIK 352 (355)
T ss_pred CCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHH
Confidence 111 24455442 4689999999999886532 2689999999999999999999986
No 103
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.81 E-value=1.7e-17 Score=192.12 Aligned_cols=319 Identities=14% Similarity=0.146 Sum_probs=211.7
Q ss_pred ccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCC--cceeEecchHHHHHHHHHH
Q 001579 170 FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM--SNASLLDEGTAAAEAMAMC 247 (1050)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~--anasl~d~~Taa~eA~~la 247 (1050)
+.+.| |..+++.+.+.+... | ..+ .++ ..+.+.++++.+++++|.+. ..+.++.+||.+.++++.+
T Consensus 8 ~~~pg--P~~~~~~~~~a~~~~--~-~~~---~~~----~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~ 75 (368)
T PRK13479 8 LLTPG--PLTTSRTVREAMLRD--W-GSW---DDD----FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGS 75 (368)
T ss_pred eecCC--CCCCCHHHHHHhCCC--C-CCC---ChH----HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHh
Confidence 34677 445777776555442 4 222 222 12467888999999999965 3466788999988888776
Q ss_pred hhhhcCCCCEEEEcCC-CChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cC--CCeeEEEEEcC-CCCeeEcc
Q 001579 248 NNIQKGKKKTFIIASN-CHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS--GDVCGVLVQYP-GTEGEVLD 314 (1050)
Q Consensus 248 ~~~~~~~gd~Vlvs~~-~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~--~~t~~V~v~~p-n~~G~i~d 314 (1050)
+. . ++++|++... .++... ...++..|++++.++. +++++ +. ++++.|++.+| |.+|.+.|
T Consensus 76 l~-~--~~~~vlv~~~~~~~~~~---~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~ 149 (368)
T PRK13479 76 LV-P--RDGKVLVPDNGAYGARI---AQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNP 149 (368)
T ss_pred cc-C--CCCeEEEEeCCchHHHH---HHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC
Confidence 53 2 6677777654 444332 2334556888887754 34444 43 45677888888 67999999
Q ss_pred HHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEee
Q 001579 315 YGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1050)
Q Consensus 315 i~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~ 392 (1050)
+++|+++||++|++++|+ ..+++|... +..++++|++++++ |+|++ +||+||+++++++++.+....
T Consensus 150 ~~~i~~l~~~~~~~livD-a~~~~g~~~~~~~~~~~d~~v~s~~K~l~g-----~~G~G~l~~~~~~~~~~~~~~----- 218 (368)
T PRK13479 150 LDEIAAVAKRHGKRLIVD-AMSSFGAIPIDIAELGIDALISSANKCIEG-----VPGFGFVIARRSELEACKGNS----- 218 (368)
T ss_pred HHHHHHHHHHcCCEEEEE-cccccCCccccccccCceEEEecCcccccc-----CCCceEEEECHHHHHHhhcCC-----
Confidence 999999999999999996 345665432 34578999999998 66743 456899999998887764321
Q ss_pred cCCCCcceEEecccccccccccc---cCCCccchhHHHHHHHHHHHHHhCc-ccHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 001579 393 DSSGKPALRVAMQTREQHIRRDK---ATSNICTAQALLANMAAMYAVYHGP-EGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 393 d~~g~~~~~l~lqtreq~irRek---aTsnict~~~l~a~~aa~y~~~~g~-~Gl~~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
..+.+++........+.. -|.|+ ..++++.+++ .++.. .|++++.+++.++++++++.|+++| ++
T Consensus 219 -----~~~~~~~~~~~~~~~~~~~~~~t~~~---~~~~~l~~al--~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 287 (368)
T PRK13479 219 -----RSLSLDLYDQWAYMEKTGQWRFTPPT---HVVAAFYQAL--LELEEEGGVPARGARYANNQRTLVAGMRALG-FE 287 (368)
T ss_pred -----CCeeecHHHHHhhhcccCCCCCCCcH---HHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence 112222110000000001 14444 3445555554 33323 3688999999999999999999998 88
Q ss_pred EcCCC--Ccc-EEEEecCC-----HHHHHHHHHHcCceeeeec---CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 469 VQGLP--FFD-TVKVKCAD-----AHAIASAAYKIEMNLRVVD---SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 469 l~~~~--~~~-~v~i~~~~-----~~~i~~~L~~~GI~~~~~~---~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
++.++ ..+ .+.+..+. ..++.++|.++||.++... .+.+|++..-++|.+|+++++++|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~ 358 (368)
T PRK13479 288 PLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIA 358 (368)
T ss_pred ccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHH
Confidence 76322 111 24444321 5789999999999986531 3589999888899999999999996
No 104
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.81 E-value=6.1e-18 Score=198.15 Aligned_cols=293 Identities=20% Similarity=0.228 Sum_probs=192.6
Q ss_pred HHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-----HHhCCCEEEEEcCCC
Q 001579 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSVGTDA 711 (1050)
Q Consensus 637 l~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~-----a~~~G~~vv~V~~d~ 711 (1050)
.++++++++|.+...+.+++|++|..+++.++. .++++|+++...|+.+... +++.|.+++.++++.
T Consensus 70 ~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~--------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 141 (402)
T cd00378 70 AIERAKKLFGAEYANVQPHSGSQANLAVYFALL--------EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGV 141 (402)
T ss_pred HHHHHHHHhCCCceeeecCCcHHHHHHHHHHhc--------CCCCEEEEecCccCccccccccccccccceeEEEecCCc
Confidence 567788999998766777778777654444331 2457899988888766443 566788877776643
Q ss_pred ---CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccc---cCCCCcccCc
Q 001579 712 ---KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---LTSPGYIGAD 785 (1050)
Q Consensus 712 ---~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~g---l~~pg~~GaD 785 (1050)
++.+|++++++++.+ +++++|++++|++ |... ++++|+++||++|+++++|+++..++.. ...+.. ++|
T Consensus 142 ~~~~~~id~~~l~~~i~~--~~~~~v~~~~~~~-~~~~-~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~d 216 (402)
T cd00378 142 DPETGLIDYDALEKMALE--FKPKLIVAGASAY-PRPI-DFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GAD 216 (402)
T ss_pred CcccCCcCHHHHHHHHHh--CCCCEEEecCccc-CCCc-CHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCc
Confidence 588999999999963 4677888877754 6665 7999999999999999999987543321 112223 789
Q ss_pred EEEeCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 786 v~~~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
+++.++||+| +||++|++++++ ++...+.... .....++.... ..++.+. .+..+-
T Consensus 217 v~~~s~sK~l------~G~~gg~i~~~~~~~~~~l~~~~--------------~~~~~~~~~~~--~~~a~~~-al~~~~ 273 (402)
T cd00378 217 VVTTTTHKTL------RGPRGGLILTRKGELAKKINSAV--------------FPGLQGGPHLH--VIAAKAV-ALKEAL 273 (402)
T ss_pred EEEeccccCC------CCCCceEEEeccHHHHHHHHHHh--------------CccccCCchHH--HHHHHHH-HHHHHh
Confidence 9999999988 357777777765 6554431100 00011111111 1111122 222222
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCC--
Q 001579 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV-- 941 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv-- 941 (1050)
..++.+..++..++++++.+.|++. +.+.. .+.+ .+-+++++++ .+.+...+.+.|.++||.+....+|.
T Consensus 274 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~-~~~~--~~~v~v~~~~----~~~~~~~~~~~l~~~gI~v~~~~~p~~~ 346 (402)
T cd00378 274 EPEFKAYAKQVVENAKALAEALKERGFKVVS-GGTD--NHLVLVDLRP----KGITGKAAEDALEEAGITVNKNTLPWDP 346 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCeEee-cCCC--CeEEEEeCCc----cCCCHHHHHHHHHHcCcEEcCCcCCCCC
Confidence 2245666677888999999999885 54432 1112 3445677652 13456677888889999885444442
Q ss_pred -----CCEEEEEcCCCC----CHHHHHHHHHHHHHHHHHH
Q 001579 942 -----PGTLMIEPTESE----SKEELDRYCDALISIREEI 972 (1050)
Q Consensus 942 -----~~~lrI~~te~~----t~eeid~fv~aL~~i~~ei 972 (1050)
...+||+++..+ +.+||+++++.|++++.+-
T Consensus 347 ~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~~ 386 (402)
T cd00378 347 SSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDA 386 (402)
T ss_pred CCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhcc
Confidence 257999988754 6899999999999877653
No 105
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.80 E-value=5.4e-18 Score=201.56 Aligned_cols=283 Identities=12% Similarity=0.090 Sum_probs=190.7
Q ss_pred HHHHHHH-HHHHHHHhcCCCCcceeEe---cchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhcc------C
Q 001579 209 RLESLLN-FQTMIADLTGLPMSNASLL---DEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRAD------G 278 (1050)
Q Consensus 209 ~le~l~e-~q~~ia~L~G~~~anasl~---d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~------~ 278 (1050)
..+.+.+ .++.+++++|++.++.... .+||.+..+++.++ +. +||+|++++.+|++....++.+.+ .
T Consensus 77 ~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al-~~--~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~ 153 (452)
T PTZ00094 77 VVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTAL-LQ--PHDRIMGLDLPSGGHLTHGFYTAKKKVSATS 153 (452)
T ss_pred HHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHh-cC--CCCEEEecccccCCcccccccccccccccce
Confidence 3455553 7889999999987654333 57887777766665 33 789999999999998877643221 1
Q ss_pred CCeEEEE--------cCchhhhc-cC-CCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-----C
Q 001579 279 FDIKVVV--------SDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-----P 343 (1050)
Q Consensus 279 ~gi~v~~--------~~~~~l~~-l~-~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-----~ 343 (1050)
.++++.. +|++++++ +. .+++.|++..+ .+|.+.|+++|+++||++|++++|++ .+++|.+. .
T Consensus 154 ~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~~s-~~g~~~di~~I~~i~~~~ga~l~vDa-aq~~G~i~~~~~~~ 231 (452)
T PTZ00094 154 IYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAGAS-AYPRDIDYKRFREICDSVGAYLMADI-AHTSGLVAAGVLPS 231 (452)
T ss_pred eeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEeCC-CCCCccCHHHHHHHHHHcCCEEEEec-cchhccccCCCCCC
Confidence 2233333 24456665 53 24566666554 59999999999999999999999943 45666552 2
Q ss_pred CCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccc
Q 001579 344 PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT 422 (1050)
Q Consensus 344 pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict 422 (1050)
|. .|+|++++|+ |+|++ |.+|++++++++.+.+..++ + ..-| + .. .|+.+.
T Consensus 232 ~~-~~~D~l~~S~hK~l~G------P~Gg~l~~~~~~~~~l~~~~-----~---~~~~-----p-----~~-~G~~~~-- 283 (452)
T PTZ00094 232 PF-PYADVVTTTTHKSLRG------PRSGLIFYRKKVKPDIENKI-----N---EAVF-----P-----GL-QGGPHN-- 283 (452)
T ss_pred CC-CCCcEEEcCCccCCCC------CCceEEEEecccchHHHHhh-----c---cccC-----C-----CC-CCCchH--
Confidence 22 3899999999 66754 44578888876544332111 0 0000 0 01 234443
Q ss_pred hhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---CCccEEEEecCC--HHHHHHHHHHcCc
Q 001579 423 AQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTVKVKCAD--AHAIASAAYKIEM 497 (1050)
Q Consensus 423 ~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~---~~~~~v~i~~~~--~~~i~~~L~~~GI 497 (1050)
...+++.+++ .++...+.+++++++.+++++|++.|++.| +++... .+...+.+..++ ..++.+.|.++||
T Consensus 284 -~~iaal~~al--~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI 359 (452)
T PTZ00094 284 -HQIAAIAVQL--KEVQSPEWKEYAKQVLKNAKALAAALEKRG-YDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNI 359 (452)
T ss_pred -HHHHHHHHHH--HHHhChhHHHHHHHHHHHHHHHHHHHHhCC-cEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCc
Confidence 3445555554 555556888999999999999999998887 888732 222234444444 6788888988899
Q ss_pred eeee---------ecCCeEEEEeccCCC----HHHHHHHHHHHh
Q 001579 498 NLRV---------VDSNTVTASFDETTT----LEDVDKLFIVFA 528 (1050)
Q Consensus 498 ~~~~---------~~~~~lris~~e~~t----~edId~lv~~l~ 528 (1050)
.+.. ..++.||+|++++|| ++||++++++|.
T Consensus 360 ~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~ 403 (452)
T PTZ00094 360 SVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLD 403 (452)
T ss_pred EEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHH
Confidence 8842 124789999999987 999999999996
No 106
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.80 E-value=1.3e-17 Score=201.05 Aligned_cols=337 Identities=16% Similarity=0.182 Sum_probs=215.0
Q ss_pred CHHHHHHHHHHHhccc-cCccccc-ccccc-cccCcchh-hhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHh
Q 001579 569 TEHELLRYIHLLQSKE-LSLCHSM-IPLGS-CTMKLNAT-TEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTI 644 (1050)
Q Consensus 569 sE~e~~r~~~~l~~~d-~~~~~~~-i~lGs-~t~~~~~~-~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael 644 (1050)
+-.++++.+.+.-.++ ..+ ++. ..+|+ ++..+.+. ......+ ..|-+-... |++++..+++.++-+|+|++
T Consensus 61 ~~~~~l~~l~~~l~~~sv~~-~~P~ry~ghm~~~~~~paila~~~a~---~~N~n~~~~-e~SP~~t~lE~~vi~~la~l 135 (608)
T TIGR03811 61 NMKDVLDELSSRLRTESVPW-HSAGRYWGHMNSETLMPAILAYNYAM---LWNGNNVAY-ESSPATSQMEEEVGKEFATL 135 (608)
T ss_pred CHHHHHHHHHHHHhcCCCCC-CCccceEEECcCCCCHHHHHHHHHHH---HhCCCCCcc-ccCchHHHHHHHHHHHHHHH
Confidence 6777888887755444 333 334 45675 22222211 1111110 111111222 67888999999999999999
Q ss_pred hCCCee-eeccCchHHHHHHHHHHHHHHHH-----hcC------------------------------------------
Q 001579 645 TGFDSF-SLQPNAGAAGEYAGLMVIRAYHK-----ARG------------------------------------------ 676 (1050)
Q Consensus 645 ~G~d~~-~l~~~sGa~ge~a~Llair~y~~-----~~G------------------------------------------ 676 (1050)
+|++.. ...+.+|+++++.+|.+.|.... ..+
T Consensus 136 ~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~ 215 (608)
T TIGR03811 136 MGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARS 215 (608)
T ss_pred hCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhcccc
Confidence 999853 24567888888888888775320 000
Q ss_pred -C-CCC-CEEEEcCCCCCccHHHHHhCCC---EEEEEcCCCCCCCCHHHHHHHHHcC---CCCEEEEEEEcCCC-ccccc
Q 001579 677 -D-HHR-NVCIIPVSAHGTNPATAAMCGM---KIVSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPST-HGVYE 746 (1050)
Q Consensus 677 -~-~~r-~~Vlip~saHgt~pa~a~~~G~---~vv~V~~d~~g~iD~e~L~~~i~~~---~~~taaV~vt~Pn~-~Gv~~ 746 (1050)
. ..+ .++++|.++|-+.++++.+.|+ .++.||+|+++++|+++|+++|++. +..+.+|+.+..+| +|.||
T Consensus 216 g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiD 295 (608)
T TIGR03811 216 GKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVD 295 (608)
T ss_pred ccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccC
Confidence 0 001 1688999999999999999999 6999999999999999999999742 23467788888765 89999
Q ss_pred cCHHHHHHHH---HHcCC--EEEEeccccccccccC-----C-----------------------------C-------C
Q 001579 747 EGIDEICKII---HDNGG--QVYMDGANMNAQVGLT-----S-----------------------------P-------G 780 (1050)
Q Consensus 747 ~di~eI~~la---~~~G~--~v~vD~A~~~al~gl~-----~-----------------------------p-------g 780 (1050)
||++|+++| +++|+ ++|||||. +|+. . + |
T Consensus 296 -pl~eI~~l~~~~~~~gl~~~lHVDAAy----GG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~g 370 (608)
T TIGR03811 296 -GIDKIVALRNKLMKEGIYFYLHVDAAY----GGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKA 370 (608)
T ss_pred -CHHHHHHHHHHHHHcCCceeEeeeccc----cchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhc
Confidence 899999998 67898 69999974 3321 1 0 1
Q ss_pred cccCcEEEeCCccccccCCCCCCCcceeeeeccc-ccCCCCCC--ccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHH
Q 001579 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSH--PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1050)
Q Consensus 781 ~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~-l~~~lpg~--~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1050)
-.++|.++.+.||++.+|+++| .+++|+. +...+.-. ++..... ... ..-+...+.++..| ..++..|
T Consensus 371 le~ADSItvDpHK~g~~Py~~G-----~ll~Rd~~~~~~~~~~a~Yl~~~~~-~~p-~~~g~~~legSR~g--a~AlklW 441 (608)
T TIGR03811 371 ISEAESVTIDPHKMGYIPYSAG-----GIVIQDIRMRDVISYFATYVFEKGA-DIP-ALLGAYILEGSKAG--ATAASVW 441 (608)
T ss_pred CcCceEEEeCcccccccCCCeE-----EEEEeCHHHHHHHhcCcchhccccc-cCc-ccccccceecCCcc--HHHHHHH
Confidence 2369999999999999998875 6777753 22222110 1100000 000 00000111222222 3356689
Q ss_pred HHHHHH--ChhhHHHHHHHHHHHHHHHHHHHhcc--------CCeeecCCCCccceeEEEecccccccCCCC----HHHH
Q 001579 858 TYIAMM--GSKGLTEASKIAILNANYMAKRLEKH--------YPILFRGVNGTVAHEFIVDLRGLKNTAGIE----PEDV 923 (1050)
Q Consensus 858 a~l~~l--G~eGl~~~a~~~~~~a~yl~~~L~~~--------~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~----~~~v 923 (1050)
+.++.+ |.+|+.++.++++++++++.+.|++. +++... ..|.++.+.|.+.+ .|.+ ..++
T Consensus 442 ~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~--~~pdlniV~Fr~~~----~g~~~l~~~n~l 515 (608)
T TIGR03811 442 AAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPL--TKPDFNMVDYVFNE----KGNDDLVKMNKL 515 (608)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEec--CCCCcceEEEEEec----CCCccHHHHHHH
Confidence 999998 99999999999999999999999873 233101 12455556666542 1222 4566
Q ss_pred HHHHHHC
Q 001579 924 AKRLMDY 930 (1050)
Q Consensus 924 akrL~d~ 930 (1050)
.+++.++
T Consensus 516 n~~i~~~ 522 (608)
T TIGR03811 516 NHAFYDY 522 (608)
T ss_pred HHHHHHh
Confidence 6776654
No 107
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.80 E-value=2.6e-17 Score=192.00 Aligned_cols=283 Identities=17% Similarity=0.120 Sum_probs=191.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEc
Q 001579 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1050)
Q Consensus 207 qG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~ 286 (1050)
.+....+.++++.+|+++|++. +.+++|+|.++.+++.++ . ++|++|++++..|++....++ ..|++++.+
T Consensus 59 ~~~~~~~~~l~~~lA~~~g~~~--~~~~~g~t~a~~~al~~l-~--~~gd~Vlv~~~~h~s~~~~~~----~~G~~~~~v 129 (387)
T PRK09331 59 QIKKPPIADFHEDLAEFLGMDE--ARVTHGAREGKFAVMHSL-C--KKGDYVVLDGLAHYTSYVAAE----RAGLNVREV 129 (387)
T ss_pred cccChHHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHh-c--CCCCEEEECCCchHHHHHHHH----HcCCEEEEE
Confidence 3344568899999999999975 677899998877776655 2 388999999999999987653 357787776
Q ss_pred Cc----------hhhhc-cC-------CCeeEEEEEcCC-CCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCc
Q 001579 287 DL----------KDIDY-KS-------GDVCGVLVQYPG-TEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGE 346 (1050)
Q Consensus 287 ~~----------~~l~~-l~-------~~t~~V~v~~pn-~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~ 346 (1050)
+. +++++ +. +++++|++++|+ .+|.+.|+++|+++||++|++++|+ +.+++|.++ +..+
T Consensus 130 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD-~a~~~g~~~~~~~~ 208 (387)
T PRK09331 130 PKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLN-GAYTVGRMPVDGKK 208 (387)
T ss_pred eCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEE-CCcccCCcCCCHHH
Confidence 54 34444 42 368999999985 5999999999999999999999994 356776543 3457
Q ss_pred ccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhH
Q 001579 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1050)
Q Consensus 347 ~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~ 425 (1050)
+|+|++++|+ |+|+. +|++||+++++++.+.+-.. .+.|... . ......|++. .+
T Consensus 209 ~g~D~~~~s~~K~l~~-----~~~~G~l~~~~~~i~~~~~~----------~~~~~~~-----~-~~~~~~~~~~---~~ 264 (387)
T PRK09331 209 LGADFIVGSGHKSMAA-----SAPSGVLATTEEYADKVFRT----------SRKFGVK-----E-VELLGCTLRG---AP 264 (387)
T ss_pred cCCCEEEeeCcccccC-----CCCEEEEEECHHHHhhcccc----------cCCCccc-----c-eeeeceecCc---hH
Confidence 8999999998 76753 34689999999877665211 0111100 0 0000112211 23
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCC-CCcc-EEEEecCC-----------HHHHHHH
Q 001579 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL-PFFD-TVKVKCAD-----------AHAIASA 491 (1050)
Q Consensus 426 l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~-G~~~l~~~-~~~~-~v~i~~~~-----------~~~i~~~ 491 (1050)
.+++++++- .. .+-+ ++.++.++++++++++|+++ | ++++.+ +... .+.+..+. +.++.+.
T Consensus 265 ~~~~~aal~--~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (387)
T PRK09331 265 LVTLMASFP--HV-VERV-KRWDEEVKKARWFVDELEKIEG-FKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEE 339 (387)
T ss_pred HHHHHHHHH--HH-HHHH-HHHHHHHHHHHHHHHHHhcCCC-EEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHH
Confidence 444445441 11 0112 24456688999999999999 6 998742 1111 12233221 3568999
Q ss_pred HHHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 492 AYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 492 L~~~GI~~~~~~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
|.++||.......+.++...+..+|++|+++++++|+
T Consensus 340 L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~ 376 (387)
T PRK09331 340 LKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFK 376 (387)
T ss_pred HHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHH
Confidence 9999997433234566666666689999999999996
No 108
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.80 E-value=3e-17 Score=190.41 Aligned_cols=284 Identities=17% Similarity=0.157 Sum_probs=191.3
Q ss_pred HhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEE
Q 001579 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1050)
Q Consensus 205 isqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~ 284 (1050)
..+|....+.++++.+|+++|++. +.++++++.++.+++.++. +++|+|+++...|.+....++ ..|++++
T Consensus 45 ~~~~~~~~~~~~~e~lA~~~g~~~--~~i~~g~~~a~~~~~~~l~---~~gd~Vl~~~~~h~s~~~~~~----~~g~~~~ 115 (370)
T TIGR02539 45 LDQITKPPIHDFLEDLAEFLGMDE--ARVTHGAREGKFAVMHALC---KEGDWVVLDGLAHYTSYVAAE----RAGLNVK 115 (370)
T ss_pred cccccchHHHHHHHHHHHHhCCCc--eEEECChHHHHHHHHHHhh---CCCCEEEECCcccHHHHHHHH----HcCCEEE
Confidence 456666678888899999999987 5568999988888777652 378999999999998876543 4577777
Q ss_pred EcC----------chhhhc-cC-------CCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CC
Q 001579 285 VSD----------LKDIDY-KS-------GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PP 344 (1050)
Q Consensus 285 ~~~----------~~~l~~-l~-------~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~p 344 (1050)
.++ ++++++ +. +++++|++++| |.+|.+.|+++|+++||++|++++|+ +.++.+.+. +.
T Consensus 116 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livD-ea~~~g~~~~~~ 194 (370)
T TIGR02539 116 EVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLN-CAYTVGRMPVSA 194 (370)
T ss_pred EEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEE-CccccCCcCCCH
Confidence 664 345554 43 36788999998 67999999999999999999999994 455666543 33
Q ss_pred CcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccch
Q 001579 345 GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTA 423 (1050)
Q Consensus 345 g~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~ 423 (1050)
..+++|++++|. |+|+. ||| +||+++++++++++...... |.+.. ..--.+|++.
T Consensus 195 ~~~~~di~v~s~sK~~~~----~g~-~G~l~~~~~~i~~l~~~~~~----------~~~~~------~~~~~~~~~~--- 250 (370)
T TIGR02539 195 KEIGADFIVGSGHKSMAA----SGP-CGVLGMSEEWEDIVLRKSRY----------SPVKE------VELLGCTSRG--- 250 (370)
T ss_pred HHcCCCEEEeeCcccccC----CCC-EEEEEECHHHHhhhcccccC----------Cccce------eeeecccccc---
Confidence 467899999998 77752 333 89999999888776321100 11100 0000122221
Q ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcC--CCCccEEEEecCC-----------HHHHHH
Q 001579 424 QALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--LPFFDTVKVKCAD-----------AHAIAS 490 (1050)
Q Consensus 424 ~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~--~~~~~~v~i~~~~-----------~~~i~~ 490 (1050)
.+..+.++++ ... .+-+++ ..+..+++++|+++|+++| ++++. +...+.+.++++. +..+.+
T Consensus 251 ~~~~~~~~al--~~~-~~~l~~-~~~~~~~~~~l~~~L~~~g-~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~ 325 (370)
T TIGR02539 251 APIVTMMASF--PHV-VERVKR-WDEEVKKTRWFVAELEDIG-FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYE 325 (370)
T ss_pred cHHHHHHHHH--HHH-HHHHHH-HHHHHHHHHHHHHHHHhCC-cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHH
Confidence 1222333332 111 122222 2334556789999999998 98742 2222334444432 346899
Q ss_pred HHHHcCce-eeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 491 AAYKIEMN-LRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 491 ~L~~~GI~-~~~~~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+|.++||. ++.-.++.+|+|+. ..|++|+++++++|+
T Consensus 326 ~L~e~GI~~ir~~~~~~iRis~~-~~t~e~i~~l~~~L~ 363 (370)
T TIGR02539 326 ELKKRGIHGIRSGQTKYFKLSVY-GLTKEQVEYVVDSFE 363 (370)
T ss_pred HHHhCCCccccCCcceEEEEEec-CCCHHHHHHHHHHHH
Confidence 99999997 55322468999984 679999999999996
No 109
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.79 E-value=1.1e-17 Score=195.24 Aligned_cols=311 Identities=14% Similarity=0.137 Sum_probs=204.1
Q ss_pred CCccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHH
Q 001579 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1050)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA 243 (1050)
|...++|+|+..+|++..+++. .+.+ |.+.+. .++..-|+...+.++|+.+|+++|.+. +.++.+|+++..+
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~-a~~~---~g~~~~--~sr~~yg~~~~~~~LE~~lA~~~g~e~--al~~~sG~~a~~~ 73 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALE-SLSH---YGCGSC--GPRGFYGTIDAHLELEQCMAEFLGTES--AILYSDGASTTSS 73 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHH-HHHH---hCCCCc--ccccccCChHHHHHHHHHHHHHhCCCc--EEEecCcHHHHHH
Confidence 4456789999988877666664 4443 445443 445556777889999999999999875 6677888777766
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEc---Cchhhhc----cC-----------CCeeEEEEEc
Q 001579 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY----KS-----------GDVCGVLVQY 305 (1050)
Q Consensus 244 ~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~---~~~~l~~----l~-----------~~t~~V~v~~ 305 (1050)
+++++ . ++||+||+++..|++++..++. . +.+++++ |.++++. +. ++++.|++..
T Consensus 74 ~i~~l-~--~~GD~Vl~~~~~h~s~~~~~~l-~---~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~ 146 (392)
T PLN03227 74 TVAAF-A--KRGDLLVVDRGVNEALLVGVSL-S---RANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEG 146 (392)
T ss_pred HHHHh-C--CCCCEEEEeccccHHHHHHHHH-c---CCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcC
Confidence 66664 2 3899999999999999988732 2 2344433 4444332 21 2577777776
Q ss_pred C-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCC-----------CcccceEEEecC-ccccccCCCCCcceEE
Q 001579 306 P-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP-----------GELGADIVVGSA-QRFGVPMGYGGPHAAF 372 (1050)
Q Consensus 306 p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p-----------g~~GaDivvgs~-k~~g~P~~~GGP~~G~ 372 (1050)
+ |..|.+.|+++|.++||++|+++++ ++.++++.+... ...|+||++++. |.+| |.+|+
T Consensus 147 v~~~~G~i~~l~~i~~l~~~~g~~liv-De~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-------~~gg~ 218 (392)
T PLN03227 147 LYKNTGTLAPLKELVALKEEFHYRLIL-DESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-------SVGGM 218 (392)
T ss_pred CcCCCCcccCHHHHHHHHHHcCCEEEE-ECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-------ccCcE
Confidence 6 7889999999999999999999999 456666654321 134789999995 6543 44567
Q ss_pred EEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchh--HHHHHHHHHHHHHhCcccHHHHHHHH
Q 001579 373 LATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ--ALLANMAAMYAVYHGPEGLKTIAQRV 450 (1050)
Q Consensus 373 la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~--~l~a~~aa~y~~~~g~~Gl~~ia~~~ 450 (1050)
+.+++++.+.+.. .+..+++++. +. ...|+..+.....+ .+++.++.
T Consensus 219 v~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~p~-~~~aa~~al~~~~~-~~~~~~~l 267 (392)
T PLN03227 219 TVGSEEVVDHQRL-----------------------------SGSGYCFSASAPPF-LAKADATATAGELA-GPQLLNRL 267 (392)
T ss_pred EecCHHHHHHHHH-----------------------------hCcCccccCCCCHH-HHHHHHHHHHHHhc-CHHHHHHH
Confidence 7778776543310 0111111111 21 11222211111111 24677888
Q ss_pred HHHHHHHHHHHhcCCCEEEc----------CCCCccEEEEecCC------------HHHHHHHHHHcCceeee-------
Q 001579 451 HGLAGTFALGLKKLGTVEVQ----------GLPFFDTVKVKCAD------------AHAIASAAYKIEMNLRV------- 501 (1050)
Q Consensus 451 ~~~a~~l~~~L~~~G~~~l~----------~~~~~~~v~i~~~~------------~~~i~~~L~~~GI~~~~------- 501 (1050)
++++++|+++|++.+ +..+ .......+.|.+.+ ..++.+.|.++||.+..
T Consensus 268 ~~~~~~l~~~L~~~~-~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~ 346 (392)
T PLN03227 268 HDSIANLYSTLTNSS-HPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKK 346 (392)
T ss_pred HHHHHHHHHHHHhcC-CccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCC
Confidence 999999999998654 3211 11112233444432 24888999999997742
Q ss_pred ----ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 502 ----VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 502 ----~~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
+++..+|++++..+|+||||+++++|+.
T Consensus 347 ~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~ 378 (392)
T PLN03227 347 FLQLVPPPCLRVVANASHTREDIDKLLTVLGE 378 (392)
T ss_pred cCCCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 2357899999999999999999999964
No 110
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.79 E-value=1.2e-17 Score=193.62 Aligned_cols=314 Identities=17% Similarity=0.161 Sum_probs=203.0
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhCCCccc--ccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHH
Q 001579 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYT--QYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1050)
Q Consensus 166 ~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t--~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA 243 (1050)
..++|+|....+...|+++. .+..-...+. ..+...++..+|..+.+.++++.+|+++|.+. +.++++|+.+..+
T Consensus 10 ~s~~YL~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~sG~~a~~~ 86 (370)
T PRK05937 10 VTNDFLGFSRSDTLVHEVEK-RYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVPSGYMANLG 86 (370)
T ss_pred ECCCccCCCCCHHHHHHHHH-HHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEECChHHHHHH
Confidence 45679999987777777663 3433110011 12345677889999999999999999999975 4566777655544
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhhc-cC------CCeeEEEEEcC-CCCeeEccH
Q 001579 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-KS------GDVCGVLVQYP-GTEGEVLDY 315 (1050)
Q Consensus 244 ~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~-l~------~~t~~V~v~~p-n~~G~i~di 315 (1050)
+...+ .++++.|+++..+|+++...++.. ....+.+.+.|++++++ +. +++.+|++.++ |++|.+.|+
T Consensus 87 ~~~~~---~~~~d~ii~d~~~H~sv~~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl 162 (370)
T PRK05937 87 LCAHL---SSVTDYVLWDEQVHISVVYSLSVI-SGWHQSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPL 162 (370)
T ss_pred HHHHh---CCCCCEEEEEhhhhHHHHHHHHHc-CCceEEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCH
Confidence 33222 136788999999999999998753 23334555667777776 43 34666677776 679999999
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCCCCCC-----cccc---eEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCc
Q 001579 316 GDFIKNAHANGVKVVMATDLLALTILKPPG-----ELGA---DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 386 (1050)
Q Consensus 316 ~~I~~~ah~~galliV~a~~~alg~l~~pg-----~~Ga---Divvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgr 386 (1050)
++|.++||++|++++|+ +.++.|.+...+ .||+ |+++.+. |.+| ++|+|+++.++ ....+..
T Consensus 163 ~eI~~l~~~~~~~livD-ea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g------~~G~~vl~~~~-~~~~~~~- 233 (370)
T PRK05937 163 EQIIALSKKYHAHLIVD-EAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALG------SMGAALLSSSE-VKQDLML- 233 (370)
T ss_pred HHHHHHHHHcCCEEEEE-CCccccccCCCCCchHHhhCCCCCcEEEEechhhhh------cCceEEEcCHH-HHHHHHH-
Confidence 99999999999999993 456666554333 3553 3556665 6553 23466666543 2221100
Q ss_pred EEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001579 387 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1050)
Q Consensus 387 ivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~ 466 (1050)
+....+++.++ |. ....++.+++ .++-.+| +.+.+++.++.+++.+.|...+
T Consensus 234 --------------------~~~~~~~s~~~-~~---~~~~a~~aal--~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~- 285 (370)
T PRK05937 234 --------------------NSPPLRYSTGL-PP---HLLISIQVAY--DFLSQEG-ELARKQLFRLKEYFAQKFSSAA- 285 (370)
T ss_pred --------------------hCCCCeecCCC-CH---HHHHHHHHHH--HHHHhCc-HHHHHHHHHHHHHHHHhcCCCC-
Confidence 00011222221 21 2333444444 3443445 4567888899999998886542
Q ss_pred EEEcCCCCccEEEEecCCHHHHHHHHHHcCceeeee---cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 467 VEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV---DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 467 ~~l~~~~~~~~v~i~~~~~~~i~~~L~~~GI~~~~~---~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
. .....+.+......++.+.|.++||.++.. ..+.+|+|++.+||++|||+|+++|.
T Consensus 286 ~-----~~~~~i~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~ 345 (370)
T PRK05937 286 P-----GCVQPIFLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLA 345 (370)
T ss_pred C-----CCEEEEEeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Confidence 1 011123332112678889999999988643 14689999999999999999999996
No 111
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.79 E-value=2.4e-17 Score=190.55 Aligned_cols=302 Identities=15% Similarity=0.167 Sum_probs=188.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g 713 (1050)
..++++.+++++|.+.+ +..++|++|...++ +.+. .++++|+++...|......+...|++++.++++.++
T Consensus 46 ~~~l~~~la~~~g~~~i-~~~~g~t~al~~~l---~~~~-----~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 116 (361)
T cd06452 46 IKDFHHDLAEFLGMDEA-RVTPGAREGKFAVM---HSLC-----EKGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHP 116 (361)
T ss_pred HHHHHHHHHHHcCCceE-EEeCCHHHHHHHHH---HHhc-----CCCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCC
Confidence 56899999999999655 34455655554433 3321 245789999887876666688899999999998765
Q ss_pred --CCCHHHHHHHHHcCC----CCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcE
Q 001579 714 --NINIEELRKAAEANR----DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1050)
Q Consensus 714 --~iD~e~L~~~i~~~~----~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv 786 (1050)
.+|+++|+++++++. +++++|++++|+ .+|... ++++|+++|+++|+++++|+|+..+...+ .+.++|+|+
T Consensus 117 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~-~~~~i~~~~~~~~~~vivD~a~~~g~~~~-~~~~~~~d~ 194 (361)
T cd06452 117 EYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH-DAKKIAKVCHEYGVPLLLNGAYTVGRMPV-SGKELGADF 194 (361)
T ss_pred CcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec-cHHHHHHHHHHcCCeEEEECCcccCCcCC-CHHHcCCCE
Confidence 899999999997421 378999999996 589987 89999999999999999999875321111 234578999
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
++.++||+|+ +++++|++++++++.+.+-........ . ......+++. ... +..+++.+..+ .+
T Consensus 195 ~~~s~~K~l~-----~~~~~G~l~~~~~~~~~l~~~~~~~~~-------~-~~~~~~~~~~-~~~-~~~~~~al~~~-~~ 258 (361)
T cd06452 195 IVGSGHKSMA-----ASAPIGVLATTEEWADIVFRTSQMFKI-------K-EVELLGCTLR-GAP-LVTLMASFPHV-KE 258 (361)
T ss_pred EEecCCcccc-----CCCCeEEEEECHHHHHHHhcccccccc-------c-eeeeeccccC-chH-HHHHHHHHHHH-HH
Confidence 9999999995 234789999987666544210000000 0 0000000000 001 11122223222 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEeccccc---ccCCCCHHHHHHHHHHCCcccCCCCCC-
Q 001579 867 GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLK---NTAGIEPEDVAKRLMDYGFHGPTMSWP- 940 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~---~~~g~~~~~vakrL~d~Gi~~~~~~~p- 940 (1050)
.+++ .++...++++++++|+++ +++ +. ......+-+.++...+. +....+..++.++|.++||... ++
T Consensus 259 ~~~~-~~~~~~~~~~l~~~L~~l~g~~v-~~-~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~---~~~ 332 (361)
T cd06452 259 RVKR-WDEEVEKARWFVAELEKIEGIKQ-LG-EKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGI---KPG 332 (361)
T ss_pred HHHH-HHHHHHHHHHHHHHHhcCCCeEE-EC-CCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEE---cCC
Confidence 2333 333456678999999875 333 21 10011122334432110 0001234479999999999842 22
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 941 VPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 941 v~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
....+||.. ...+++|+++++++|+++.
T Consensus 333 ~~~~~ri~~-~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 333 LTRYFKLST-YGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CceEEEEEe-cCCCHHHHHHHHHHHHHHh
Confidence 235678776 3468999999999998764
No 112
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.79 E-value=9.5e-18 Score=196.71 Aligned_cols=313 Identities=14% Similarity=0.155 Sum_probs=201.4
Q ss_pred CccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHH
Q 001579 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (1050)
Q Consensus 165 ~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~ 244 (1050)
...++|+|.+.+|.++.+.+. .+ ++.+ +. +..+....|..+...++++.+|+++|.+. +.++.+|+.+.+++
T Consensus 50 ~~sn~ylgl~~~p~v~~a~~~-~~-~~~~--~~--~~~s~~~~g~~~~~~~Le~~la~~~g~~~--~l~~~sG~~an~~a 121 (402)
T TIGR01821 50 WCSNDYLGMGQHPEVLQAMHE-TL-DKYG--AG--AGGTRNISGTNIPHVELEAELADLHGKES--ALVFTSGYVANDAT 121 (402)
T ss_pred eEccCcCCCCCCHHHHHHHHH-HH-HHcC--CC--CcchhhhhCCcHHHHHHHHHHHHHhCCCe--EEEECchHHHHHHH
Confidence 345678999977655555543 33 2222 21 11234455666777889999999999754 67788888887766
Q ss_pred HHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEc---Cchhhhc-cC----CCeeEEEEEcC-CCCeeEccH
Q 001579 245 AMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KS----GDVCGVLVQYP-GTEGEVLDY 315 (1050)
Q Consensus 245 ~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~---~~~~l~~-l~----~~t~~V~v~~p-n~~G~i~di 315 (1050)
+.+.... .+++.|+.+...|+++...++. .|+++..+ |.+++++ ++ +++++|++.+| |.+|.+.|+
T Consensus 122 i~~l~~~-~~~~~v~~~~~~h~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l 196 (402)
T TIGR01821 122 LATLAKI-IPGCVIFSDELNHASMIEGIRH----SGAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPI 196 (402)
T ss_pred HHHhhCC-CCCCEEEEcchHhHHHHHHHHH----cCCeEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCH
Confidence 6543211 2567777788899999988753 35555443 4455655 32 35788888887 789999999
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCCCCCC-----c----ccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCC
Q 001579 316 GDFIKNAHANGVKVVMATDLLALTILKPPG-----E----LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPG 385 (1050)
Q Consensus 316 ~~I~~~ah~~galliV~a~~~alg~l~~pg-----~----~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpg 385 (1050)
++|.++|+++|++++|+ +.+++|++.+.+ . ...||++++. |.||.+ | ||+++++++++.+..
T Consensus 197 ~~i~~l~~~~~~~livD-ea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~---G----G~i~~~~~~~~~l~~ 268 (402)
T TIGR01821 197 EEICDLADKYGALTYLD-EVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVV---G----GYIAASRKLIDAIRS 268 (402)
T ss_pred HHHHHHHHHcCCEEEEe-CcccccccCCCCCccchhccCCCCCeEEEEechhhhccC---C----ceeecCHHHHHHHHH
Confidence 99999999999999993 455655443221 1 2368998886 888642 2 678788776655410
Q ss_pred cEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCC
Q 001579 386 RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLG 465 (1050)
Q Consensus 386 rivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G 465 (1050)
. .+.|.. ..+.| +....+..+++ .++... +++.++..++.+++++.|+++|
T Consensus 269 ~----------~~~~~~------------t~~~~---~~~~aaa~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g 319 (402)
T TIGR01821 269 Y----------APGFIF------------TTSLP---PAIAAGATASI--RHLKES--QDLRRAHQENVKRLKNLLEALG 319 (402)
T ss_pred h----------CcCcee------------cCcCC---HHHHHHHHHHH--HHhhcC--HHHHHHHHHHHHHHHHHHHHcC
Confidence 0 000100 00011 01122223333 233222 5566677789999999999987
Q ss_pred CEEEcCCCCccEEEEecCC---HHHHHHHHHH-cCceeeee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 466 TVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 466 ~~~l~~~~~~~~v~i~~~~---~~~i~~~L~~-~GI~~~~~-------~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
++++.+. ...+.+.++. +.++.++|.+ +||.++.. ..+.+|++++.++|++|||+++++|..
T Consensus 320 -~~~~~~~-~~i~~i~~~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~ 392 (402)
T TIGR01821 320 -IPVIPNP-SHIVPVIIGDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLL 392 (402)
T ss_pred -CCcCCCC-CCEEEEEeCCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 7765321 1223343432 6788888865 59998653 125799999999999999999999963
No 113
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=4.5e-17 Score=193.52 Aligned_cols=309 Identities=18% Similarity=0.145 Sum_probs=200.5
Q ss_pred HHHHHHHhhCCCe----eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH--H----HH--hCCCEE
Q 001579 637 LGEWLCTITGFDS----FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA--T----AA--MCGMKI 704 (1050)
Q Consensus 637 l~~~lael~G~d~----~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa--~----a~--~~G~~v 704 (1050)
.++..+++++.+. ++++++||++++.+++.++. .++|+|+..+-.||.|.. + .. ..+..+
T Consensus 85 ~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~--------~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~ 156 (475)
T PLN03226 85 CQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL--------QPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYF 156 (475)
T ss_pred HHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC--------CCCCEEEECCCCcCcchhhhhhhcccccccceEEE
Confidence 4446778888775 57889999999987777653 256888874443443332 1 11 122222
Q ss_pred E--EEcCC-CCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEecccccccccc---CC
Q 001579 705 V--SVGTD-AKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---TS 778 (1050)
Q Consensus 705 v--~V~~d-~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl---~~ 778 (1050)
. ..+.+ ++|.+|+++|++++.++ +++.|++.. +.+|... |+++|+++||++|++++||+||..++.+. ..
T Consensus 157 ~~~~y~~~~~~g~iD~d~Le~~l~~~--~pklIv~~~-S~~s~~~-D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~ 232 (475)
T PLN03226 157 ESMPYRLDESTGLIDYDKLEKKAMLF--RPKLIIAGA-SAYPRDW-DYARMRKIADKVGALLMCDMAHISGLVAAQEAAS 232 (475)
T ss_pred EeeeeeecCCCCCcCHHHHHHHHhhc--CCeEEEEec-CcCCCcc-CHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCC
Confidence 2 33344 45899999999999753 455555543 4467665 89999999999999999999987655432 23
Q ss_pred CCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCC---CCCCCCCCCCCCCcchhhhHHHHHH
Q 001579 779 PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSALILPI 855 (1050)
Q Consensus 779 pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~---~~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1050)
|.+ ++|++++++||||+ ||..|+|++++.+.+.+.+...+. .+. .+..+ .....+++ +...+++
T Consensus 233 p~~-~~Div~~t~hK~L~------GP~Gg~I~~~~~~~~~~~~g~~~~-~d~~~~i~~a~---~~~~~g~p--~~~~iaa 299 (475)
T PLN03226 233 PFE-YCDVVTTTTHKSLR------GPRGGMIFFRKGPKPPKGQGEGAV-YDYEDKINFAV---FPGLQGGP--HNHTIAA 299 (475)
T ss_pred CCC-CCeEEEecCccccc------CCCceEEEEchhhcccccCCCccH-HHHHHHhcccc---CCccCCCc--hHHHHHH
Confidence 332 79999999999994 565588998876554432221000 000 00000 00111111 1122333
Q ss_pred HHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 001579 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1050)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~ 934 (1050)
..+.+..+-..|+++..++...|+++|++.|++. +++...+ ...|.+++|+++ .+++..++.+.|.+.||.+
T Consensus 300 l~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~---t~~hi~lv~~~~----~gi~~~~~~~~L~~~~I~~ 372 (475)
T PLN03226 300 LAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGG---TDNHLVLWDLRP----LGLTGSRVEKVLDLAHITL 372 (475)
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCC---CCCCEEEEEccC----CCCCHHHHHHHHHHCCCEE
Confidence 4455666666677788888999999999999875 6765422 235778889864 3678889999999999987
Q ss_pred CCCC--C---C-CCCEEEE----EcCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Q 001579 935 PTMS--W---P-VPGTLMI----EPTESESKEELDRYCDALISIREEIAQIEN 977 (1050)
Q Consensus 935 ~~~~--~---p-v~~~lrI----~~te~~t~eeid~fv~aL~~i~~ei~~~~~ 977 (1050)
.... + | .+.++|+ -.+...+++|++++++.|.++++....+..
T Consensus 373 nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~~~~~~~ 425 (475)
T PLN03226 373 NKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIALKIQK 425 (475)
T ss_pred CCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHHhhhhhh
Confidence 5321 1 1 2467887 345567889999999999999987655444
No 114
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=4.1e-17 Score=191.90 Aligned_cols=297 Identities=20% Similarity=0.261 Sum_probs=192.2
Q ss_pred HHHHHHHH----HHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH-HHH--hCCCEE
Q 001579 632 EMFNNLGE----WLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAA--MCGMKI 704 (1050)
Q Consensus 632 ~~i~el~~----~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa-~a~--~~G~~v 704 (1050)
+...++++ .+++++|.+.+.+.++||+.|+.+++.++- +++|+|+++...|+.+-. .+. ..+..+
T Consensus 70 ~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~--------~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~ 141 (416)
T PRK13034 70 EFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALL--------KPGDTILGMSLSHGGHLTHGAKVSLSGKWY 141 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhc--------CCCCEEEEcCccceeeeecCCcceecccee
Confidence 44556666 999999999876778899888766655431 256899999888876311 111 122222
Q ss_pred --EEEcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccC-CCC
Q 001579 705 --VSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPG 780 (1050)
Q Consensus 705 --v~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~-~pg 780 (1050)
+.++++. ++.+|+++|++++++ .++++|+++.+. +|..- |+++|+++|+++|+++++|+||..+..+.. .++
T Consensus 142 ~~~~~~~~~~~~~~d~~~le~~l~~--~~~klVi~~~~~-~g~~~-dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~ 217 (416)
T PRK13034 142 NAVQYGVDRLTGLIDYDEVEELAKE--HKPKLIIAGFSA-YPREL-DFARFREIADEVGALLMVDMAHIAGLVAAGEHPN 217 (416)
T ss_pred eeEEcccccccCCcCHHHHHHHHhh--cCCeEEEECCCc-ccccc-CHHHHHHHHHHcCCEEEEeCcccccCcccCCCCC
Confidence 3444443 367999999999964 357788776654 57665 899999999999999999999865443321 122
Q ss_pred c-ccCcEEEeCCccccccCCCCCCCcceeeeeccc-ccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHH
Q 001579 781 Y-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1050)
Q Consensus 781 ~-~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~-l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1050)
. .++|++++++||+|+ ||..|++++++. +...+.... . .+..++.. .+..++.+.+
T Consensus 218 ~~~~~Di~~~s~~K~l~------g~~GG~v~~~~~~~~~~~~~~~-~-------------~~~~~~~~--~~~~aa~~~a 275 (416)
T PRK13034 218 PFPHAHVVTTTTHKTLR------GPRGGMILTNDEEIAKKINSAV-F-------------PGLQGGPL--MHVIAAKAVA 275 (416)
T ss_pred CCCCceEEEEeCcccCC------CCCCeEEEECcHHHHHHHHhhc-C-------------CcccCCcc--HHHHHHHHHH
Confidence 2 258999999999994 344467766543 222221000 0 00001111 1112222334
Q ss_pred HHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC-
Q 001579 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT- 936 (1050)
Q Consensus 859 ~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~- 936 (1050)
.+..+.. +..+..++...++++|+++|++. +++... +...|.+++++.. .+.+...+.++|.++||.+..
T Consensus 276 l~~~~~~-~~~~~~~~l~~~a~~l~~~L~~~G~~~~~~---~~~t~i~~v~~~~----~~~~~~~~~~~L~~~GI~v~~~ 347 (416)
T PRK13034 276 FGEALQP-EFKTYAKQVIANAQALAEVLKERGYDLVSG---GTDNHLLLVDLRP----KGLSGKDAEQALERAGITVNKN 347 (416)
T ss_pred HHHHhCh-hHHHHHHHHHHHHHHHHHHHHHcCCEeccC---CCCCcEEEEEcCC----CCCCHHHHHHHHHhCCcEEecc
Confidence 4444432 33455677889999999999875 555421 1234556666642 245677888999999998754
Q ss_pred -----CCCC-CCCEEEEEcCC----CCCHHHHHHHHHHHHHHHH
Q 001579 937 -----MSWP-VPGTLMIEPTE----SESKEELDRYCDALISIRE 970 (1050)
Q Consensus 937 -----~~~p-v~~~lrI~~te----~~t~eeid~fv~aL~~i~~ 970 (1050)
..+| ++..||+++++ .++++|||+++++|.+++.
T Consensus 348 ~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 348 TVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred CCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 2334 45689999988 6779999999999998866
No 115
>PRK07179 hypothetical protein; Provisional
Probab=99.78 E-value=1.4e-17 Score=195.72 Aligned_cols=309 Identities=16% Similarity=0.163 Sum_probs=200.2
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHH
Q 001579 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (1050)
Q Consensus 166 ~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~ 245 (1050)
..++|+|...+|.++.+... .+.+. .+. +..+....+..+...++++.+|+++|.+. +.++++|+.+.++++
T Consensus 60 ~~~~YL~l~~~p~v~~a~~~-~~~~~---~~~--~~~s~~~~~~~~~~~~le~~la~~~g~~~--~~~~~sG~~An~~~l 131 (407)
T PRK07179 60 QSNDYLNLSGHPDIIKAQIA-ALQEE---GDS--LVMSAVFLHDDSPKPQFEKKLAAFTGFES--CLLCQSGWAANVGLL 131 (407)
T ss_pred ecCCccCCCCCHHHHHHHHH-HHHHh---CCC--CCccccccCCchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHH
Confidence 34568888866555444442 33321 111 11111111222345566789999999875 567899998877766
Q ss_pred HHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEc---Cchhhhc-cCC-CeeEEEEEcC-CCCeeEccHHHHH
Q 001579 246 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFI 319 (1050)
Q Consensus 246 la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~---~~~~l~~-l~~-~t~~V~v~~p-n~~G~i~di~~I~ 319 (1050)
.++. .++++|+++...|+++...++. .|++++.. |++++++ +++ ++++|++.++ |.+|.+.|+++|.
T Consensus 132 ~~l~---~~g~~v~~~~~~h~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~ 204 (407)
T PRK07179 132 QTIA---DPNTPVYIDFFAHMSLWEGVRA----AGAQAHPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIV 204 (407)
T ss_pred HHhC---CCCCEEEEECCcCHHHHHHHHH----CCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHH
Confidence 5542 2689999999999999877643 35555444 5567776 654 4677777776 6899999999999
Q ss_pred HHHHhCCcEEEEEecCccccCCCCCC-----cc----cceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEe
Q 001579 320 KNAHANGVKVVMATDLLALTILKPPG-----EL----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVG 389 (1050)
Q Consensus 320 ~~ah~~galliV~a~~~alg~l~~pg-----~~----GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG 389 (1050)
++|+++|++++++ +.+++|.....+ .+ ++|++++|. |.++. ..|++++++++.+.++..
T Consensus 205 ~l~~~~~~~livD-ea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~-------~~G~l~~~~~~~~~~~~~--- 273 (407)
T PRK07179 205 DIAEEFGCVLVVD-ESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG-------RAGIITCPRELAEYVPFV--- 273 (407)
T ss_pred HHHHHcCCEEEEE-CcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc-------cCeEEEeCHHHHHHHHHh---
Confidence 9999999999994 345554432111 23 469999997 87752 257888888776554200
Q ss_pred EeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEE
Q 001579 390 VSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV 469 (1050)
Q Consensus 390 ~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l 469 (1050)
..+ + ...+|.+ .+...++.+++ .++ +..+++.+++.++.+++++.|+++| +++
T Consensus 274 ------~~~-~------------~~~~t~~---~~~~aa~~aal--~~~--~~~~~~~~~l~~~~~~l~~~L~~~g-~~v 326 (407)
T PRK07179 274 ------SYP-A------------IFSSTLL---PHEIAGLEATL--EVI--ESADDRRARLHANARFLREGLSELG-YNI 326 (407)
T ss_pred ------CcC-e------------eeCCCCC---HHHHHHHHHHH--HHH--hcCHHHHHHHHHHHHHHHHHHHHcC-CCC
Confidence 000 0 0012222 12333333333 333 1225677889999999999999997 876
Q ss_pred cCCCCccEEEEecCC---HHHHHHHHHHcCceeeee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 470 QGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 470 ~~~~~~~~v~i~~~~---~~~i~~~L~~~GI~~~~~-------~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
.+.. ..+.+..+. +..+.+.|.++||.++.. ..+.+|++++..+|++||++++++|..
T Consensus 327 ~~~~--~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~ 394 (407)
T PRK07179 327 RSES--QIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCRE 394 (407)
T ss_pred CCCC--CEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 6432 234444432 567888999999975422 136899999999999999999999963
No 116
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.78 E-value=4.3e-17 Score=191.97 Aligned_cols=292 Identities=20% Similarity=0.240 Sum_probs=190.0
Q ss_pred HHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-----HHhCCCEEEEEcCCC
Q 001579 637 LGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGMKIVSVGTDA 711 (1050)
Q Consensus 637 l~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~-----a~~~G~~vv~V~~d~ 711 (1050)
.++.+++++|.+...+.+++|++|..+++.+ +. .++++|+++...|+.+... ....|++++.++++.
T Consensus 76 ~~~~la~~~g~~~~~i~~~sgt~al~~~l~~---l~-----~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 147 (416)
T PRK00011 76 AIDRAKELFGAEYANVQPHSGSQANAAVYFA---LL-----KPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE 147 (416)
T ss_pred HHHHHHHHhCCCceeeecCCchHHHHHHHHH---hc-----CCCCEEEEeccccCCccccccccccccceeeEeecCcCc
Confidence 5669999999987656667787766443333 21 2467899998888765332 223467888888874
Q ss_pred -CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEecccccccccc---CCCCcccCcEE
Q 001579 712 -KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL---TSPGYIGADVC 787 (1050)
Q Consensus 712 -~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl---~~pg~~GaDv~ 787 (1050)
++.+|+++|++++++ .++++|+++.++ .|... |+++|+++|+++|+++++|+++..++... ..+-. ++|++
T Consensus 148 ~~~~~d~~~l~~~i~~--~~~k~v~~~~~~-~~~~~-~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~ 222 (416)
T PRK00011 148 ETGLIDYDEVEKLALE--HKPKLIIAGASA-YSRPI-DFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVV 222 (416)
T ss_pred ccCCcCHHHHHHHHHh--cCCCEEEECCCc-CCCcc-CHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEE
Confidence 488999999999973 367788876544 46555 79999999999999999999975443221 12223 78999
Q ss_pred EeCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 788 HLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 788 ~~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
++++||+| +||.+|+++++ +++...+.... .....++ +. ....++...+... ...+
T Consensus 223 ~~S~~K~l------~g~~gg~i~~~~~~~~~~l~~~~--------------~~~~~~~-~~-~~~~aa~~~a~~~-~~~~ 279 (416)
T PRK00011 223 TTTTHKTL------RGPRGGLILTNDEELAKKINSAV--------------FPGIQGG-PL-MHVIAAKAVAFKE-ALEP 279 (416)
T ss_pred EecCCcCC------CCCCceEEEeCCHHHHHHHHHHh--------------CccccCC-cc-HHHHHHHHHHHHH-HHhh
Confidence 99999987 35767788875 45554432100 0000111 10 1111222223323 3345
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC------
Q 001579 867 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW------ 939 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~------ 939 (1050)
++.+..++..+++++++++|++. +++. .+ +...|-+.+++.+ .+.+..++.+.|.++||.+.....
T Consensus 280 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~--~~~~~~~~i~~~~----~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~ 352 (416)
T PRK00011 280 EFKEYAQQVVKNAKALAEALAERGFRVV-SG--GTDNHLVLVDLRS----KGLTGKEAEAALEEANITVNKNAVPFDPRS 352 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeee-ec--CCCCeEEEEeCcc----cCCCHHHHHHHHHHcCcEEccCcCCCCCCC
Confidence 67777888889999999999875 4443 11 1223445566542 234677899999999998753211
Q ss_pred C-CCCEEEEEcCC----CCCHHHHHHHHHHHHHHHHH
Q 001579 940 P-VPGTLMIEPTE----SESKEELDRYCDALISIREE 971 (1050)
Q Consensus 940 p-v~~~lrI~~te----~~t~eeid~fv~aL~~i~~e 971 (1050)
| .+..+|+.... ..|.+|+|+++++|++++..
T Consensus 353 ~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 353 PFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 1 24568985533 45789999999999988654
No 117
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.78 E-value=2.5e-17 Score=189.00 Aligned_cols=340 Identities=17% Similarity=0.198 Sum_probs=229.2
Q ss_pred cccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC---CCeeeeccCchHHHHHHHHHHHH
Q 001579 593 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 593 ~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G---~d~~~l~~~sGa~ge~a~Llair 669 (1050)
..|++..+++.++..+..+.+ | ++++.- .+ +-..+|.++|+++++ ++.+ |+.+|||.++++++.+++
T Consensus 57 ~~Gh~~~~i~~Ai~~Q~~~l~-~--~~~~~~----t~--~Pa~~LA~~L~~~aP~~~l~~v-Ff~~sGSeAvEtAlKma~ 126 (449)
T COG0161 57 NHGHGRPEIAEAIKKQLDKLP-H--VMFGGF----TH--EPAIELAEKLAELAPEGGLDHV-FFTDSGSEAVETALKMAL 126 (449)
T ss_pred hcCcCCHHHHHHHHHHHHhCC-c--hhhccc----CC--chHHHHHHHHHHhCCCCCccEE-EEeCCchHHHHHHHHHHH
Confidence 469999999998888753332 2 222211 01 113489999999998 5554 778899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC-------------EEEEEcCCC------CCC------CCHHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDA------KGN------INIEELRKA 723 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~-------------~vv~V~~d~------~g~------iD~e~L~~~ 723 (1050)
.|++.+|+++|+++| ...++||..-.++...|+ .+..++... ++. -+.++|+++
T Consensus 127 qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~ 206 (449)
T COG0161 127 QYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEAL 206 (449)
T ss_pred HHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHH
Confidence 999999987777676 467899987666443331 233444322 111 237889999
Q ss_pred HHcCC-CCEEEEEEEcC--CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEe
Q 001579 724 AEANR-DNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHL 789 (1050)
Q Consensus 724 i~~~~-~~taaV~vt~P--n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~ 789 (1050)
|.+++ +++++++++.- +..|++.+ .++++.++|++||+++|+|.+ ..||.+.|.+ -+|+++.
T Consensus 207 i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV----~tGFGRTG~~FA~e~~gi~PDi~~~ 282 (449)
T COG0161 207 ILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV----ATGFGRTGKMFACEHAGIVPDILCL 282 (449)
T ss_pred HHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc----eeCCCcCchhhhhhhcCCCCCeeee
Confidence 99988 56666666532 23677653 489999999999999999975 7899998863 3699887
Q ss_pred CCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHH
Q 001579 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1050)
Q Consensus 790 ~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1050)
.|.++ +|--.+|.+.+++++.+.+-....+. +.|| .+ +.|+++.+++|.+.+..+-++++.
T Consensus 283 --aKGLT----~GY~Pl~a~l~~~~I~~~~~~~~~~~----f~HG------~T---YsghPlacAaAla~L~i~e~e~l~ 343 (449)
T COG0161 283 --AKGLT----GGYLPLSAVLTSDRIYEAFSDGDAGA----FMHG------HT---YSGNPLACAAALANLDILEEEDLL 343 (449)
T ss_pred --ccccc----ccchhhHhHhhhHHHHHHHhcccCCe----eccC------Cc---cccCHHHHHHHHHHHHHHHhcCHH
Confidence 58875 34345677777777665442211110 1122 22 346888899999999999988877
Q ss_pred HHHHHHHHHHHHHHHHHhc-cC--Ceee--cCCCCcc-ceeEEEecccccccC-CCCHHHHHHHHHHCCcccCCCCCCCC
Q 001579 870 EASKIAILNANYMAKRLEK-HY--PILF--RGVNGTV-AHEFIVDLRGLKNTA-GIEPEDVAKRLMDYGFHGPTMSWPVP 942 (1050)
Q Consensus 870 ~~a~~~~~~a~yl~~~L~~-~~--~v~~--~g~~g~~-~~e~i~~~~~~~~~~-g~~~~~vakrL~d~Gi~~~~~~~pv~ 942 (1050)
+.++ ....||.++|++ +. +.+- .+ .|.. .-|++-|... +... ..-...+.+.+.++|+.+..+ +
T Consensus 344 ~~~~---~~~~~l~~~L~~~l~~~p~VgdVR~-~Gli~~iElv~d~~t-~~~f~~~~~~~~~~~~~e~Gl~iRp~----g 414 (449)
T COG0161 344 ERVA---EIGAYLQAGLQAALADHPLVGDVRG-LGLIGAIELVADKAT-KTPFEARVGARVRAAALERGLLIRPL----G 414 (449)
T ss_pred HHHH---HHHHHHHHHHHHhcccCCcEEEeec-cceEEEEEEeccccc-ccchhhhHHHHHHHHHHHCCeEEeec----C
Confidence 6554 678899999987 32 1211 11 1221 1122222110 0000 011457888888999998743 5
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 943 GTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 943 ~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
+.+.++|+...|++|||++++++.+.+++...
T Consensus 415 ~~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 415 DVIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 79999999999999999999999999987654
No 118
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.78 E-value=1.2e-17 Score=192.55 Aligned_cols=313 Identities=13% Similarity=0.096 Sum_probs=203.2
Q ss_pred CCCCcHHHHHHHHhCCCccccc---CCChhHHh---hhHHHHHHHHHHHHHHhcCCC-CcceeEecc-hHHHHHHHHHHh
Q 001579 177 NTHVPPVILRNIMENPAWYTQY---TPYQAEIA---QGRLESLLNFQTMIADLTGLP-MSNASLLDE-GTAAAEAMAMCN 248 (1050)
Q Consensus 177 ~~~~p~~i~~~i~~~~~~~t~y---tpyq~eis---qG~le~l~e~q~~ia~L~G~~-~anasl~d~-~Taa~eA~~la~ 248 (1050)
|..+|+.+.+.+.. ++..| +-...+++ ....+.+.+.++.+++|+|.+ ..++.++.| +|.+++++..++
T Consensus 7 p~~~p~~V~~a~~~---~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l 83 (355)
T cd00611 7 PAALPEEVLEQAQK---ELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL 83 (355)
T ss_pred CCCCCHHHHHHHHH---HHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc
Confidence 56688777766654 22222 11111123 344578889999999999984 456777777 999999888765
Q ss_pred hhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch------h---hh-c-cCCCeeEEEEEc-CCCCeeEccHH
Q 001579 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK------D---ID-Y-KSGDVCGVLVQY-PGTEGEVLDYG 316 (1050)
Q Consensus 249 ~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~------~---l~-~-l~~~t~~V~v~~-pn~~G~i~di~ 316 (1050)
-...+++++|++....|.. ...++..|+++++++.+ + ++ . ++++++.|.+++ .|.+|.+.+
T Consensus 84 ~~~~~~~~~i~~g~~~~~~-----~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~-- 156 (355)
T cd00611 84 LGDKGTADYVVTGAWSAKA-----AKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD-- 156 (355)
T ss_pred CCCCCeEEEEECCHHHHHH-----HHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc--
Confidence 2111255666653333332 22345667777776532 2 11 2 567899998876 689999732
Q ss_pred HHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCC
Q 001579 317 DFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSS 395 (1050)
Q Consensus 317 ~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~ 395 (1050)
++++.+|++++|++ ..++|..+ +..++| +++.++|++ +|.||+|+++++++++.++++....
T Consensus 157 ---~i~~~~g~~~~VDa-~qs~g~~~idv~~~~--~~~ss~~K~-----lGP~G~g~l~~~~~~~~~~~~~~~~------ 219 (355)
T cd00611 157 ---EVPDTGGVPLVADM-SSNILSRPIDVSKFG--VIYAGAQKN-----LGPAGVTVVIVRKDLLGKARKITPS------ 219 (355)
T ss_pred ---eecccCCCeEEEEc-cccccCCCCCHHHhC--EEEeecccc-----cCCCceEEEEECHHHHhhcccCCCC------
Confidence 34455999999944 34555443 345566 455556655 2336789999999998877653211
Q ss_pred CCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcC-CCEE-EcCC
Q 001579 396 GKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKL-GTVE-VQGL 472 (1050)
Q Consensus 396 g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~-G~~~-l~~~ 472 (1050)
+ +...+.... ....+|+|+ .+++++.+++ .|+-.+ |++++.+|..+++++++++|+++ | +. ...+
T Consensus 220 ----~-~~~~~~~~~-~~~~~Tpn~---~~i~~L~aal--~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g-l~~~~~~ 287 (355)
T cd00611 220 ----M-LNYKTHADN-NSLYNTPPT---FAIYMMGLVL--KWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG-FYRGPVD 287 (355)
T ss_pred ----c-ccHHHHHhc-CCCCCCChH---HHHHHHHHHH--HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc-ccccCCC
Confidence 0 000010010 012478887 6788888887 677777 79999999999999999999999 6 63 2111
Q ss_pred --CCcc-EEEEecCC---HHHHHHHHHHcCceeeee--cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 473 --PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 473 --~~~~-~v~i~~~~---~~~i~~~L~~~GI~~~~~--~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
.... .++|+.++ ..++.+.+.+.|+..... ..+.+|+|+..+||++|||+|+++|+
T Consensus 288 ~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~ 351 (355)
T cd00611 288 KRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMK 351 (355)
T ss_pred HHHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHH
Confidence 1232 37777665 345556777799975433 24789999999999999999999996
No 119
>PLN02483 serine palmitoyltransferase
Probab=99.78 E-value=7.2e-17 Score=193.19 Aligned_cols=317 Identities=17% Similarity=0.217 Sum_probs=204.6
Q ss_pred CCccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHH
Q 001579 164 NKVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEA 243 (1050)
Q Consensus 164 n~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA 243 (1050)
|....||+|.+..+...++.+.+.+.. |.++. ..+....|+...+.++++.+|+++|.+. +.++.+|+++..+
T Consensus 104 n~~s~~YLgl~~~~~~~~~~~~~ai~~---~g~~~--~~sr~~~g~~~~~~ele~~lA~~~g~~~--ai~~~~G~~an~~ 176 (489)
T PLN02483 104 NLGSYNYLGFAAADEYCTPRVIESLKK---YSAST--CSSRVDGGTTKLHRELEELVARFVGKPA--AIVFGMGYATNST 176 (489)
T ss_pred EeecCCccCcCCCCHHHHHHHHHHHHH---hCCCC--CccccccCCcHHHHHHHHHHHHHhCCCc--EEEECCHHHHHHH
Confidence 344568999996443333344345443 33332 2445556778889999999999999765 6677778776665
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcC---chhhhc-c-------CCCe-----eEEEEEcC-
Q 001579 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY-K-------SGDV-----CGVLVQYP- 306 (1050)
Q Consensus 244 ~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~---~~~l~~-l-------~~~t-----~~V~v~~p- 306 (1050)
++.++ . ++||.|++++..|++++..++ ..|++++.++ .+++++ + .+++ +.+++..+
T Consensus 177 ~i~al-~--~~Gd~Vi~d~~~h~s~~~~~~----~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v 249 (489)
T PLN02483 177 IIPAL-I--GKGGLIISDSLNHNSIVNGAR----GSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGI 249 (489)
T ss_pred HHHHh-C--CCCCEEEEcchhhHHHHHHHH----HcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCC
Confidence 44443 2 389999999999999998864 3577777764 344443 2 1333 55555554
Q ss_pred -CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCC----------CcccceEEEecC-ccccccCCCCCcceEEEE
Q 001579 307 -GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP----------GELGADIVVGSA-QRFGVPMGYGGPHAAFLA 374 (1050)
Q Consensus 307 -n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p----------g~~GaDivvgs~-k~~g~P~~~GGP~~G~la 374 (1050)
++.|.+.|+++|+++|+++|++++++ +.++++.+... ...++||+++|. |.||.+ | ||++
T Consensus 250 ~s~~G~~~~l~~I~~la~~~~~~livD-Ea~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~---G----G~i~ 321 (489)
T PLN02483 250 YSMEGELCKLPEIVAVCKKYKAYVYLD-EAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSC---G----GYIA 321 (489)
T ss_pred CCCCCcccCHHHHHHHHHHcCCEEEEE-CcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccC---c----eEEE
Confidence 77999999999999999999999993 45565443211 124679999997 988631 2 7999
Q ss_pred EehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCccc---HHHHHHHHH
Q 001579 375 TSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG---LKTIAQRVH 451 (1050)
Q Consensus 375 ~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~G---l~~ia~~~~ 451 (1050)
.++++++.+.... +++ ...++ +++....+..+++ -...+.+| .++..++..
T Consensus 322 ~~~~li~~l~~~~----------~~~------------~~~~~---~~p~~~~~~~aaL-~~l~~~~g~~~~~~~~~~l~ 375 (489)
T PLN02483 322 GSKELIQYLKRTC----------PAH------------LYATS---MSPPAVQQVISAI-KVILGEDGTNRGAQKLAQIR 375 (489)
T ss_pred cCHHHHHHHHHhC----------ccc------------cccCC---cCHHHHHHHHHHH-HHHHhCccccchHHHHHHHH
Confidence 8888776652100 000 00001 1112222222332 11222222 344567889
Q ss_pred HHHHHHHHHHhcCCCEEEcCCCCccE--EEEecCC-HHHHHHHHHHcCceeeee-------cCCeEEEEeccCCCHHHHH
Q 001579 452 GLAGTFALGLKKLGTVEVQGLPFFDT--VKVKCAD-AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVD 521 (1050)
Q Consensus 452 ~~a~~l~~~L~~~G~~~l~~~~~~~~--v~i~~~~-~~~i~~~L~~~GI~~~~~-------~~~~lris~~e~~t~edId 521 (1050)
++.+++++.|+++| +.+........ +.+..+. ..++.+.|.++||.+... ..+.+|+|++..+|+||||
T Consensus 376 ~~~~~l~~~L~~~G-~~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId 454 (489)
T PLN02483 376 ENSNFFRSELQKMG-FEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLI 454 (489)
T ss_pred HHHHHHHHHHHHCC-CcccCCCCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHH
Confidence 99999999999997 87764221112 2222222 568889999999987532 1267999999999999999
Q ss_pred HHHHHHhC
Q 001579 522 KLFIVFAG 529 (1050)
Q Consensus 522 ~lv~~l~~ 529 (1050)
+++++|..
T Consensus 455 ~~l~~L~~ 462 (489)
T PLN02483 455 KALEVISE 462 (489)
T ss_pred HHHHHHHH
Confidence 99999963
No 120
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=5.3e-17 Score=188.96 Aligned_cols=332 Identities=16% Similarity=0.174 Sum_probs=212.7
Q ss_pred ccccccccccCcchhhhhcc-----ccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCe--ee-eccCch-HHH
Q 001579 590 SMIPLGSCTMKLNATTEMMP-----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS--FS-LQPNAG-AAG 660 (1050)
Q Consensus 590 ~~i~lGs~t~~~~~~~~~~~-----~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~--~~-l~~~sG-a~g 660 (1050)
..|.||.|.+.++...+... +..+.+ .|+| .+|..++.+.+.+++.+..|.+. .+ +..+.| ++|
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~------~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~a 101 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT-HYTP------SAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEA 101 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC-CCCC------CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHH
Confidence 56788888775554433221 122222 3443 46888888888888888888542 22 444444 444
Q ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCC---CCCCCCHHHHHHHHHcCCCCEEEEEEE
Q 001579 661 EYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD---AKGNINIEELRKAAEANRDNLSTLMVT 737 (1050)
Q Consensus 661 e~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d---~~g~iD~e~L~~~i~~~~~~taaV~vt 737 (1050)
.+.+++++. .++|+||+|++.+.++.....++|.+++.|+++ .+..+|+++|+++++ ++|++|+++
T Consensus 102 l~~~~~a~~--------~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~---~ktk~i~ln 170 (393)
T COG0436 102 LFLAFLALL--------NPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT---PKTKAIILN 170 (393)
T ss_pred HHHHHHHhc--------CCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC---ccceEEEEe
Confidence 443333332 256889999998888888899999999999975 267999999999998 799999999
Q ss_pred cC-CCccccc--cCHHHHHHHHHHcCCEEEEecccc-ccccc--cCCCCccc--Cc--EEEeCCccccccCCCCCCCcce
Q 001579 738 YP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVG--LTSPGYIG--AD--VCHLNLHKTFCIPHGGGGPGMG 807 (1050)
Q Consensus 738 ~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~-~al~g--l~~pg~~G--aD--v~~~~~hKtf~~P~g~GGPg~G 807 (1050)
+| |.+|.+- +.+++|.++|++||++++.|.++. ....+ +.+..+.. .| |.+.++.|+|+++ |+++|
T Consensus 171 ~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mt----GwRvG 246 (393)
T COG0436 171 SPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMT----GWRIG 246 (393)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccccc----cccee
Confidence 99 5788774 469999999999999999998852 12222 11112221 23 4566788998754 89999
Q ss_pred eeeec-ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC-hhhHHHHHHHHHHHHHHHHHH
Q 001579 808 PIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG-SKGLTEASKIAILNANYMAKR 885 (1050)
Q Consensus 808 ~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG-~eGl~~~a~~~~~~a~yl~~~ 885 (1050)
++++. +.+.+.+- .+ +....+|.+...|.. +.+.+..-. .+.++...+...++++.+.++
T Consensus 247 ~~v~~~~~l~~~~~-~~-------------~~~~~~~~~~~~Q~a----a~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~ 308 (393)
T COG0436 247 WVVGPPEELIAALR-KL-------------KSYLTSCAPTPAQYA----AIAALNGPQSDEVVEEMREEYRERRDLLVEA 308 (393)
T ss_pred EeecChHHHHHHHH-HH-------------HHhcccCCCHHHHHH----HHHHhcCccchHHHHHHHHHHHHHHHHHHHH
Confidence 99998 55554431 00 011122332223332 111121110 123444555677888999999
Q ss_pred Hhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCCccc-CCCCCCC---CCEEEEEcCCCCCHHHH
Q 001579 886 LEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG-PTMSWPV---PGTLMIEPTESESKEEL 958 (1050)
Q Consensus 886 L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~Gi~~-~~~~~pv---~~~lrI~~te~~t~eei 958 (1050)
|.++ +.+.. .+.|.++ ..++++. ..+..+++++|. ++|+.+ |...|.. .+.+|++.... .+++
T Consensus 309 l~~~~g~~~~~-~p~Ga~Y--~~~~i~~-----~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~--~~~l 378 (393)
T COG0436 309 LNEIGGLSVVK-PPEGAFY--LFPKIPE-----LLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATS--EETL 378 (393)
T ss_pred HHhcCCeeecc-CCCeeEE--EEeecCC-----CCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecC--HHHH
Confidence 9976 44322 1233332 3345542 257789999987 557874 5555643 37899998754 4788
Q ss_pred HHHHHHHHHHHHH
Q 001579 959 DRYCDALISIREE 971 (1050)
Q Consensus 959 d~fv~aL~~i~~e 971 (1050)
++.++.+.+.++.
T Consensus 379 ~~a~~rl~~~~~~ 391 (393)
T COG0436 379 EEALRRLARFLAE 391 (393)
T ss_pred HHHHHHHHHHHHh
Confidence 8888877776654
No 121
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.77 E-value=1.4e-17 Score=190.83 Aligned_cols=289 Identities=21% Similarity=0.275 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHhhCCC----eeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH---HHH-------
Q 001579 632 EMFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP---ATA------- 697 (1050)
Q Consensus 632 ~~i~el~~~lael~G~d----~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~p---a~a------- 697 (1050)
++..-.++.+++++|++ .++++|.||++++.+.++++- . ++|+|+..+..||-|. ...
T Consensus 66 ~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl----~----pGD~Im~l~l~~GGHlshg~~~~~~~~~~ 137 (399)
T PF00464_consen 66 EIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALL----K----PGDTIMGLSLPHGGHLSHGSSVNFKKISA 137 (399)
T ss_dssp HHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT---------TT-EEEEEEGGGT--GGGT-TTSHSBSSH
T ss_pred HHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHH----h----hcCcEEecChhhccccccccccccccccc
Confidence 33444667889999999 899999999999877776654 2 5678887666666543 222
Q ss_pred HhCCCEEEEEcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEecccccccc--
Q 001579 698 AMCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-- 774 (1050)
Q Consensus 698 ~~~G~~vv~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~-- 774 (1050)
....++++.+++|+ ++.+|.+++++.+++++++ +|++...++.-.+ |++++.++|++.|++|++|.+|..++.
T Consensus 138 ~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPk--lIi~G~S~y~~~~--d~~~~reIad~vga~l~~D~sH~~GLIa~ 213 (399)
T PF00464_consen 138 SGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPK--LIICGASSYPRPI--DFKRFREIADEVGAYLMADISHIAGLIAG 213 (399)
T ss_dssp HHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--S--EEEEE-SSTSS-----HHHHHHHHHHTT-EEEEE-TTTHHHHHT
T ss_pred ccceEEEEeeeeecCCCeECHHHHHHHHhhcCCC--EEEECchhccCcc--CHHHHHHHHHhcCcEEEecccccccceeh
Confidence 23457899999984 5999999999999976555 5666554443333 799999999999999999999965443
Q ss_pred -ccCCCCcccCcEEEeCCccccccCCCCCCCcceeeeeccc--------------ccCCCCCCccccCCCCCCCCCCCCC
Q 001579 775 -GLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--------------LAPFLPSHPVVSTGGIPAPEKSQPL 839 (1050)
Q Consensus 775 -gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~--------------l~~~lpg~~vg~~~~~~~~~~~~~t 839 (1050)
.+.+|-+. +||++++.|||| .||..|+|.+++. +.+.+... ..
T Consensus 214 g~~~~P~~~-ADvvt~sThKtl------~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~a---------------vf 271 (399)
T PF00464_consen 214 GLFPNPFPY-ADVVTGSTHKTL------RGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSA---------------VF 271 (399)
T ss_dssp TSS--GCCT-SSEEEEESSGGG-------SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHH---------------HT
T ss_pred heecCcccc-ceEEEeeccccc------cccCceEEEEcCCccccCCcccccHHHHHHHhccc---------------cC
Confidence 34577765 999999999999 5899999999932 22211100 01
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCC
Q 001579 840 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI 918 (1050)
Q Consensus 840 ~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~ 918 (1050)
+...+.+..+ .+++.|.+...++-. .+++.+++.+.||+.|++.|.+. ++|+.. +...|.+++|+++ .++
T Consensus 272 P~~qg~~h~~-~iaalAval~ea~~~-~fk~Ya~qVv~NAk~La~~L~~~G~~v~~g---gTd~H~vlvd~~~----~~~ 342 (399)
T PF00464_consen 272 PGLQGGPHMH-RIAALAVALKEALSP-EFKEYAKQVVKNAKALAEALQERGFKVVTG---GTDNHQVLVDLRS----FGI 342 (399)
T ss_dssp TTT-SS--HH-HHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHHTT-EEGGG---S-SSSEEEEEGGG----GTS
T ss_pred CCcccCcchh-HHHHHHHHHhcccCH-HHHHHHHHHHHHHHHHHHHHhhCCcEEEEC---CCCCCeEEEEecc----ccc
Confidence 1111112111 233334444444443 45889999999999999999886 888753 4667889999874 367
Q ss_pred CHHHHHHHHHHCCcccCC--CCC---C-CCCEEEEEcCCCC----CHHHHHHHHH
Q 001579 919 EPEDVAKRLMDYGFHGPT--MSW---P-VPGTLMIEPTESE----SKEELDRYCD 963 (1050)
Q Consensus 919 ~~~~vakrL~d~Gi~~~~--~~~---p-v~~~lrI~~te~~----t~eeid~fv~ 963 (1050)
+..++.++|.+.||.+.. +.+ | .+..|||...+.+ .++|+..+.+
T Consensus 343 ~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 343 DGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAE 397 (399)
T ss_dssp -HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHH
T ss_pred chHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHh
Confidence 889999999999998742 222 1 3568999877643 3455555443
No 122
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.77 E-value=1.4e-16 Score=186.60 Aligned_cols=319 Identities=17% Similarity=0.192 Sum_probs=206.6
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
..||++.+++..++..+......+.. -+ ..+...++++.|+++++.+.+ ++.+||++++++++.++|.|
T Consensus 47 ~~lGh~~p~v~~a~~~~~~~~~~~~~--~~--------~~~~~~~la~~L~~~~~~~~~-~f~~SGseA~e~Alk~ar~~ 115 (397)
T TIGR03246 47 NALGHAHPELVKALIEQADKLWHIGN--GY--------TNEPVLRLAKKLVDATFADKV-FFCNSGAEANEAALKLARRY 115 (397)
T ss_pred ccCCCCCHHHHHHHHHHHHhcccccC--cc--------CCHHHHHHHHHHHhhCCCCEE-EEeCCcHHHHHHHHHHHHHH
Confidence 45788776666665554211111111 01 113345889999999887654 67789999999999999988
Q ss_pred HHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEc
Q 001579 672 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY 738 (1050)
Q Consensus 672 ~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~ 738 (1050)
...++..+|++|| ...++||.......+.|. .+..++. .|+++|+++++ +++++|+++.
T Consensus 116 ~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~---~~~aavi~Ep 187 (397)
T TIGR03246 116 ALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-----NDLAAAKALIS---DKTCAVIVEP 187 (397)
T ss_pred HHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-----CCHHHHHHHhc---cCeEEEEEec
Confidence 6554333455555 567899988765544332 2334443 38999999996 6899999986
Q ss_pred CC-Cccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCccccccCCCCCCCcc
Q 001579 739 PS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGM 806 (1050)
Q Consensus 739 Pn-~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~hKtf~~P~g~GGPg~ 806 (1050)
++ +.|++. +.+++|+++|++||+++++|.++ .|+.+.|.+ .+|++++ .|.++ ||..+
T Consensus 188 i~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~----tG~Gr~G~~~a~~~~gv~pDi~t~--~K~lg-----gG~pi 256 (397)
T TIGR03246 188 IQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ----TGVGRTGELYAYMHYGVTPDILTS--AKALG-----GGFPI 256 (397)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hcCCccccchhhhhcCCCCCEEEe--ehhhh-----CCcce
Confidence 54 467652 36999999999999999999875 344444432 3677755 57763 45678
Q ss_pred eeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHH
Q 001579 807 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1050)
Q Consensus 807 G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L 886 (1050)
|.+++++++.+.+.... .+.+ +.|++..++++.+.+..+..+.+ .++...+.++|.++|
T Consensus 257 gav~~~~~i~~~~~~~~---------------~~~t---~~~~p~~~aaa~a~l~~~~~~~l---~~~~~~~~~~l~~~L 315 (397)
T TIGR03246 257 GAMLTTTEIAAHLKVGT---------------HGTT---YGGNPLACAVAGKVLDLVNTPEL---LAGVKQRHDLFVDGL 315 (397)
T ss_pred eEEEEcHHHHHhccCCC---------------cCCC---CCCCHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHH
Confidence 88888888776552110 0011 12344455666777776654443 445557788999999
Q ss_pred hcc---CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHH
Q 001579 887 EKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRY 961 (1050)
Q Consensus 887 ~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~f 961 (1050)
+++ +.+. ..| .|.. +.+.+.+ .......++.++|.++|+.+.... .+.+|++|+..+|++|||++
T Consensus 316 ~~l~~~~~~~~~vrg-~G~~---~~i~~~~---~~~~~~~~~~~~l~~~Gv~~~~~g---~~~lR~~p~~~~t~~~i~~~ 385 (397)
T TIGR03246 316 EKINARYNVFSEIRG-KGLL---IGAVLTE---AYQGKAKQFVNAAAEEGVIALIAG---PNVVRFAPSLVISDDDIDEG 385 (397)
T ss_pred HHHHhcCCCeEeeec-CceE---EEEEEcC---chhhHHHHHHHHHHHCCeEEeecC---CCEEEEeCCCCCCHHHHHHH
Confidence 874 2322 111 1211 1222211 001235688999999999875332 37899999999999999999
Q ss_pred HHHHHHHHHH
Q 001579 962 CDALISIREE 971 (1050)
Q Consensus 962 v~aL~~i~~e 971 (1050)
+++|.+++.+
T Consensus 386 ~~~l~~~l~~ 395 (397)
T TIGR03246 386 LARFERAIEQ 395 (397)
T ss_pred HHHHHHHHHH
Confidence 9999988765
No 123
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=2e-16 Score=179.55 Aligned_cols=312 Identities=16% Similarity=0.197 Sum_probs=218.7
Q ss_pred HHHHHHHHHHHHHHhhCCC--eeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCE
Q 001579 630 YQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 703 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d--~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~ 703 (1050)
...++.++.+.|..+++.+ .+.+.+++|+.|.++++..+- .++++||+..+ |.|.. .+++.|.+
T Consensus 36 F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~--------~pgdkVLv~~n--G~FG~R~~~ia~~~g~~ 105 (383)
T COG0075 36 FVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV--------EPGDKVLVVVN--GKFGERFAEIAERYGAE 105 (383)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeC--ChHHHHHHHHHHHhCCc
Confidence 4467889999999999988 355677888888777765432 24578887543 44433 47889999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEecccccccccc-CCCCc
Q 001579 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGY 781 (1050)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl-~~pg~ 781 (1050)
++.+.+...-.+|+++++++++++ ++.++|.+++- +.+|+.. |+++|+++|++||++++||+. .++++. ..+.+
T Consensus 106 v~~~~~~wg~~v~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvln-pl~~I~~~~k~~g~l~iVDaV--sS~Gg~~~~vd~ 181 (383)
T COG0075 106 VVVLEVEWGEAVDPEEVEEALDKD-PDIKAVAVVHNETSTGVLN-PLKEIAKAAKEHGALLIVDAV--SSLGGEPLKVDE 181 (383)
T ss_pred eEEEeCCCCCCCCHHHHHHHHhcC-CCccEEEEEeccCcccccC-cHHHHHHHHHHcCCEEEEEec--ccCCCcccchhh
Confidence 999998776789999999999854 56777777775 4589999 899999999999999999986 455554 35678
Q ss_pred ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCcc-ccCCCC-----CCCCCCCCCCCCCcchhhhHHHHHH
Q 001579 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV-VSTGGI-----PAPEKSQPLGTIAAAPWGSALILPI 855 (1050)
Q Consensus 782 ~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~v-g~~~~~-----~~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1050)
||+|+++...+|.|+.| ||+|++.++++..+.+..+.. +.+.|. .+ .+...++.+. + ...+.+
T Consensus 182 wgiDv~itgSQK~l~~P-----PGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~-~~~~~~p~Tp--p---v~~i~a 250 (383)
T COG0075 182 WGIDVAITGSQKALGAP-----PGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYM-EKKGSTPYTP--P---VNLIYA 250 (383)
T ss_pred cCccEEEecCchhccCC-----CccceeEECHHHHHHHhcCCCCceeecHHHHHHHH-hhcCCCCCCC--C---HHHHHH
Confidence 99999999999999654 899999999865554432211 122111 00 0001111111 1 112233
Q ss_pred HHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCcccee-EEEecccccccCCCCHHHHHHHH-HHCCc
Q 001579 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHE-FIVDLRGLKNTAGIEPEDVAKRL-MDYGF 932 (1050)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e-~i~~~~~~~~~~g~~~~~vakrL-~d~Gi 932 (1050)
...++..+-+||+..+.+++..+++++++.++++ +++.- +.+..... ..+..+ .|++..++..+| .++|+
T Consensus 251 L~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~--~~~~~s~tvta~~~P-----~g~~~~~~~~~~~~~~g~ 323 (383)
T COG0075 251 LREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA--DPERRSPTVTAIKVP-----EGVDDKKVRRALLKEYGV 323 (383)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc--CcccCCCceEEEECC-----CCCCcHHHHHHHHHhCCE
Confidence 4566788889999999999999999999999986 66642 11111111 223332 466655555555 46698
Q ss_pred ccCCCCCCCC-CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 933 HGPTMSWPVP-GTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 933 ~~~~~~~pv~-~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
.+....-|+. ..+||.-.-..+.+++...+.+|..++.+..
T Consensus 324 ~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 324 EIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred EecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 8754333443 5799998888899999999999999988763
No 124
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.77 E-value=1.3e-16 Score=186.82 Aligned_cols=314 Identities=18% Similarity=0.244 Sum_probs=202.9
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
..+|++.+++..++..+.-.. .+.. ..+. .+...++.+.|+++++.+.+ ++.+||++++++++.++|.|
T Consensus 52 ~~lGh~~p~v~~ai~~~~~~~-~~~~-~~~~--------~~~~~~l~~~l~~~~~~~~~-~~~~SGseA~e~Alk~a~~~ 120 (396)
T PRK04073 52 VNQGHRHPKIIQALKDQADKV-TLTS-RAFH--------SDQLGPWYEKVAKLTGKDMV-LPMNTGAEAVETAIKAARRW 120 (396)
T ss_pred ccCCCCCHHHHHHHHHHHhhc-cccc-cccC--------CHHHHHHHHHHHhcCCCCeE-EEcCChHHHHHHHHHHHHHH
Confidence 457888877776665542211 1111 0111 12345788999999887654 66789999999999988887
Q ss_pred HHh-cCC-CCCCEEE-EcCCCCCccHHHHHhCCCE------------EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEE
Q 001579 672 HKA-RGD-HHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMV 736 (1050)
Q Consensus 672 ~~~-~G~-~~r~~Vl-ip~saHgt~pa~a~~~G~~------------vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~v 736 (1050)
+.. +|. .+|++|| ...+.||.......+.+-. ++.++. .|+++|+++++ +++++|++
T Consensus 121 ~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~---~~~~~vii 192 (396)
T PRK04073 121 AYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-----GDLEALKAAIT---PNTAAFLV 192 (396)
T ss_pred hhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-----CCHHHHHHhcc---cCeEEEEE
Confidence 432 232 2344555 5678999876554433211 233443 28899999986 78999999
Q ss_pred EcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCc--------ccCcEEEeCCccccccCCCCCCC
Q 001579 737 TYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPHGGGGP 804 (1050)
Q Consensus 737 t~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~--------~GaDv~~~~~hKtf~~P~g~GGP 804 (1050)
+.| |..|.+.+ .+++|.++|+++|+++++|+++. ++.+.|. ..+|++++ .|.++ +||.
T Consensus 193 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~----g~g~~g~~~~~~~~~~~pdi~~~--sK~lg----~gg~ 262 (396)
T PRK04073 193 EPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT----GLGRTGKLFACDWDNVTPDMYIL--GKALG----GGVF 262 (396)
T ss_pred cCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh----CCCcCcHHHHhhhcCCCCCEEEe--ccccc----CCCC
Confidence 888 56887753 28999999999999999998753 3433331 24687775 58764 5667
Q ss_pred cceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHH
Q 001579 805 GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAK 884 (1050)
Q Consensus 805 g~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~ 884 (1050)
.+|++++++++.+.+.... .. ...+ +++..++++.+.|..+.++++.+ +...+.++|.+
T Consensus 263 ~ig~~~~~~~i~~~~~~~~------------~~--~t~~----~~~~~~aaa~aaL~~~~~~~l~~---~~~~~~~~l~~ 321 (396)
T PRK04073 263 PISCVAANRDILGVFTPGS------------HG--STFG----GNPLACAVSIAALEVLEEEKLPE---RSLELGEYFKE 321 (396)
T ss_pred cceEEEEcHHHHhhhcCCC------------CC--CCCC----CCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHH
Confidence 7999999987776552100 00 1111 23344455566666665555543 34456889999
Q ss_pred HHhcc-CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHH
Q 001579 885 RLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRY 961 (1050)
Q Consensus 885 ~L~~~-~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~f 961 (1050)
+|+++ +..+ .++ .|.+ +.+++. .+..++.++|.++|+.+.... .+.|||+|+...|++|||++
T Consensus 322 ~L~~l~~~~i~~~~~-~g~~---~~~~~~-------~~~~~~~~~l~~~Gv~~~~~~---~~~iRi~p~l~~t~e~i~~~ 387 (396)
T PRK04073 322 QLKEIDNPMIKEVRG-RGLF---IGVELN-------EPARPYCEALKEEGLLCKETH---ETVIRFAPPLVITKEELDWA 387 (396)
T ss_pred HHHhhcCCcccceec-ceEE---EEEEec-------chHHHHHHHHHHCCeEEecCC---CCEEEEECCcccCHHHHHHH
Confidence 99875 2211 111 1221 334432 245789999999999974321 37899999999999999999
Q ss_pred HHHHHHHH
Q 001579 962 CDALISIR 969 (1050)
Q Consensus 962 v~aL~~i~ 969 (1050)
+++|++++
T Consensus 388 ~~~l~~~l 395 (396)
T PRK04073 388 FEKIKAVL 395 (396)
T ss_pred HHHHHHHh
Confidence 99998764
No 125
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.77 E-value=7.4e-17 Score=188.37 Aligned_cols=296 Identities=18% Similarity=0.260 Sum_probs=195.7
Q ss_pred ccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V 707 (1050)
.|..+...++++.+++++|.+.+.+ .++|++|..+++.++. .++|+|+++...|.+....+.+.+.+.+.+
T Consensus 79 ~G~~~~~~~le~~ia~~~g~~~~ii-~~~~~~a~~~~~~~l~--------~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~ 149 (393)
T TIGR01822 79 CGTQDIHKELEAKIAAFLGTEDTIL-YASCFDANGGLFETLL--------GAEDAIISDALNHASIIDGVRLCKAKRYRY 149 (393)
T ss_pred cCChHHHHHHHHHHHHHhCCCcEEE-ECchHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHhcCCceEEe
Confidence 4777788899999999999976534 4567766644433321 256899999888876666667777776554
Q ss_pred cCCCCCCCCHHHHHHHHHcC---CCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCC-----
Q 001579 708 GTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS----- 778 (1050)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~---~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~----- 778 (1050)
+ .+|+++|+++++++ +.++++|++..+ |.+|.+. ++++|+++|+++|+++++|+++..+..+...
T Consensus 150 ~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~-~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~ 223 (393)
T TIGR01822 150 A-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIA-PLDEICDLADKYDALVMVDECHATGFLGPTGRGSHE 223 (393)
T ss_pred C-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcC-CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHH
Confidence 3 38999999999742 227888888766 5789987 7999999999999999999997433322110
Q ss_pred -CC-cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHH
Q 001579 779 -PG-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1050)
Q Consensus 779 -pg-~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1050)
.+ ..+.|++++++||+|+ |+++|++++++++.+.+.... .....++.. .+ ..+.++
T Consensus 224 ~~~~~~~~di~~~s~sK~l~------g~r~G~~~~~~~~~~~l~~~~-----------~~~~~~~~~-~~----~~~~a~ 281 (393)
T TIGR01822 224 LCGVMGRVDIITGTLGKALG------GASGGFTTARKEVVELLRQRS-----------RPYLFSNSL-PP----AVVGAS 281 (393)
T ss_pred hcCCCCCCeEEEEEChHHhh------CCCcEEEEeCHHHHHHHHHhC-----------ccceecCCC-CH----HHHHHH
Confidence 11 1257999999999873 567799988876665432100 000001101 01 111223
Q ss_pred HHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 001579 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1050)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~ 935 (1050)
.+.+..+ ++..+..++...+++++.+.|++. +++. ++.++. +.+.+.+ +.+..+++++|.++||.+.
T Consensus 282 ~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~i~~~~-----~~~~~~l~~~L~~~gI~v~ 349 (393)
T TIGR01822 282 IKVLEML--EASNELRDRLWANTRYFRERMEAAGFDIK--PADHPI---IPVMLYD-----AVLAQRFARRLLEEGIYVT 349 (393)
T ss_pred HHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHCCeeEe
Confidence 3444443 234455566778889999999874 4432 112221 2222221 1346789999999999876
Q ss_pred CCCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 936 TMSWPV----PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 936 ~~~~pv----~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
...||. ...+||+++..+|++|||+++++|.++.+++
T Consensus 350 ~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 350 GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 444552 2469999999999999999999999987654
No 126
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.77 E-value=1.1e-16 Score=185.25 Aligned_cols=298 Identities=15% Similarity=0.203 Sum_probs=187.4
Q ss_pred HHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCC-----------CCCCEEEEcCCCCC----ccHH
Q 001579 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-----------HHRNVCIIPVSAHG----TNPA 695 (1050)
Q Consensus 631 ~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~-----------~~r~~Vlip~saHg----t~pa 695 (1050)
.+.+.++++++++++|.+.+ +..++|++|...+++++- .+|+ ..+++||+|..... +...
T Consensus 44 ~~~~~~~~~~~a~~~g~~~~-~~~~g~t~al~~al~al~----~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~ 118 (363)
T TIGR01437 44 KELVNKTGEYIANLLGVEDA-VIVSSASAGIAQSVAAVI----TRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVET 118 (363)
T ss_pred HHHHHHHHHHHHHhhCCCeE-EEEcCHHHHHHHHHHHHh----cCCCcchhhcccccccccceEEEECccchhcCCchHH
Confidence 35678999999999999865 566777777765555432 2332 13457888773221 1234
Q ss_pred HHHhCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEE-EEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccc
Q 001579 696 TAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLM-VTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ 773 (1050)
Q Consensus 696 ~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~-vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al 773 (1050)
...+.|++++.+++ ++.+|+++++++|+ ++|++++ +++| +++|.+. ++++|+++||++|+++++|+++..
T Consensus 119 ~~~~~g~~~v~v~~--~~~~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~-~~~~i~~~a~~~gi~vivD~a~~~-- 190 (363)
T TIGR01437 119 MVRLGGGKVVEAGY--ANECSAEQLEAAIT---EKTAAILYIKSHHCVQKSML-SVEDAAQVAQEHNLPLIVDAAAEE-- 190 (363)
T ss_pred HHHhcCCeEEEEcC--CCCCCHHHHHHhcC---hhceEEEEEecCCCCcCCcC-CHHHHHHHHHHcCCeEEEECCCCC--
Confidence 56789999999986 46799999999997 7888776 5664 6678776 799999999999999999998641
Q ss_pred cccCCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHH
Q 001579 774 VGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1050)
Q Consensus 774 ~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1050)
.+..+..+|+|++++++||+|+ ||.+|+++.++++.+.+.....+. . +..+ ..+ .+. ..+
T Consensus 191 -~~~~~~~~g~D~~~~S~~K~l~------gp~~G~l~~~~~~i~~~~~~~~~~-~----~~~~-----~~~--~~~-~gl 250 (363)
T TIGR01437 191 -DLQKYYRLGADLVIYSGAKAIE------GPTSGLVLGKKKYIEWVKLQSKGI-G----RAMK-----VGK--ENI-LGL 250 (363)
T ss_pred -chHHHHHcCCCEEEEeCCcccC------CCceEEEEEcHHHHHHHHhccCCC-c----ceec-----cCH--HHH-HHH
Confidence 1222346789999999999883 666788888766554432110000 0 0000 000 011 112
Q ss_pred HHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeec-CCCCccceeEEEecccccccCCCCHHHHHHHHHHC
Q 001579 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFR-GVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1050)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~-g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~ 930 (1050)
..+..++...+.+-+. ...+++.++.++|+++ +.+... +..+.......+.+.. +..+++.++++++|.++
T Consensus 251 ~aAl~~~~~~~~~~~~----~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~--~~~g~~~~~l~~~L~~~ 324 (363)
T TIGR01437 251 TAALEQYLSTGKESGA----EMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDE--SELGMTAADVVQALRQG 324 (363)
T ss_pred HHHHHHHHccCcccHH----HHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEec--cCCCCCHHHHHHHHhcC
Confidence 2233333333333222 2334577899999876 333211 1111111122233321 01367899999999987
Q ss_pred C--cccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 931 G--FHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 931 G--i~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
| |.+.. .|...+.+++.+.. .+.+|+|+++++|++++
T Consensus 325 ~~~I~~r~-~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~~ 363 (363)
T TIGR01437 325 EPAIYTRG-YKANEGIIEIDPRS-VTGGQLDIIVERIREIV 363 (363)
T ss_pred CCCEEEee-eeecCCeEEEEeec-CCHHHHHHHHHHHHHhC
Confidence 7 44432 22235789999885 55999999999998863
No 127
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.76 E-value=6.9e-17 Score=189.42 Aligned_cols=296 Identities=19% Similarity=0.214 Sum_probs=190.6
Q ss_pred cHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEc
Q 001579 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~ 708 (1050)
|..+...++++.+++++|.+.. +..++|++++.+++.++..+ .+++.|+.+...|++....+...|.+++.++
T Consensus 87 g~~~~~~~Le~~la~~~g~~~~-l~~~sG~~an~~ai~~l~~~------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~ 159 (402)
T TIGR01821 87 GTNIPHVELEAELADLHGKESA-LVFTSGYVANDATLATLAKI------IPGCVIFSDELNHASMIEGIRHSGAEKFIFR 159 (402)
T ss_pred CCcHHHHHHHHHHHHHhCCCeE-EEECchHHHHHHHHHHhhCC------CCCCEEEEcchHhHHHHHHHHHcCCeEEEEC
Confidence 4445567899999999997654 66778887765555443311 1345666666677666555677888877665
Q ss_pred CCCCCCCCHHHHHHHHHcCCC-CEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEecccccccccc-C-----CCC
Q 001579 709 TDAKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-T-----SPG 780 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~-~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl-~-----~pg 780 (1050)
. .|+++++++++...+ ++++|++++| |.+|.+. ++++|+++|+++|+++++|+++..+..|- . .++
T Consensus 160 ~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~ 233 (402)
T TIGR01821 160 H-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA-PIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDG 233 (402)
T ss_pred C-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc-CHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhcc
Confidence 4 488999998875433 6889999998 4689987 79999999999999999999976332210 0 011
Q ss_pred -cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHH
Q 001579 781 -YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1050)
Q Consensus 781 -~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1050)
...+|++..++.|.|+. +| |++++++++...+.... +.. ..... +++..++++.+.
T Consensus 234 ~~~~~div~~t~sKa~g~------~G-G~i~~~~~~~~~l~~~~-----------~~~-~~t~~----~~~~~~aaa~aa 290 (402)
T TIGR01821 234 LMHRIDIIEGTLAKAFGV------VG-GYIAASRKLIDAIRSYA-----------PGF-IFTTS----LPPAIAAGATAS 290 (402)
T ss_pred CCCCCeEEEEechhhhcc------CC-ceeecCHHHHHHHHHhC-----------cCc-eecCc----CCHHHHHHHHHH
Confidence 11368888888999853 33 67777766554432100 000 00001 122233344455
Q ss_pred HHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCCcccCCC
Q 001579 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPTM 937 (1050)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~Gi~~~~~ 937 (1050)
+..+..+ .+..++...+++++.++|++. +++. .+.+++ +.+.+.. .....++.++|. ++||.+...
T Consensus 291 L~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~i---~~i~~~~-----~~~a~~~~~~L~~~~Gi~v~~~ 358 (402)
T TIGR01821 291 IRHLKES--QDLRRAHQENVKRLKNLLEALGIPVI--PNPSHI---VPVIIGD-----AALCKKVSDLLLNKHGIYVQPI 358 (402)
T ss_pred HHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHhcCCEEEEeE
Confidence 5555433 233344457889999999875 4432 112222 2222220 113568999987 469998655
Q ss_pred CCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 938 SWP-VP---GTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 938 ~~p-v~---~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
.+| ++ +.+||+++..+|++|||+++++|+++++++
T Consensus 359 ~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 359 NYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 444 22 579999999999999999999999987653
No 128
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.76 E-value=4.1e-17 Score=187.26 Aligned_cols=301 Identities=17% Similarity=0.105 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC-
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~- 711 (1050)
...++++.+++++|.+.+ +..++|+++.+.++.+++ ..++++|+++...|.++...+...|++++.+++++
T Consensus 19 ~~~~~~~~la~~~~~~~~-~~~~sgt~al~~~l~~l~-------~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVKYA-VAVSSGTAALHLALRALG-------IGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHcC-------CCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCC
Confidence 466899999999998765 345677776654444331 12567899999888777667788999999999987
Q ss_pred CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCC-CCcccCcEEEeC
Q 001579 712 KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-PGYIGADVCHLN 790 (1050)
Q Consensus 712 ~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~-pg~~GaDv~~~~ 790 (1050)
++.+|+++|+++++ +++++|+++++ +|... |+++|.++|+++|+++++|+++..+...... .+.+ .|+.+++
T Consensus 91 ~~~~d~~~l~~~i~---~~~~~v~~~~~--~G~~~-~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~-~d~~~~S 163 (352)
T cd00616 91 TYNIDPELIEAAIT---PRTKAIIPVHL--YGNPA-DMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTF-GDAGAFS 163 (352)
T ss_pred cCCcCHHHHHHhcC---cCCeEEEEECC--CCCcC-CHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccC-cceeEEc
Confidence 68899999999996 78999999864 68876 7999999999999999999997543221111 1222 5778887
Q ss_pred Cc--cccccCCCCCCCcceeeeecc-cccCCCCCC-ccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 791 LH--KTFCIPHGGGGPGMGPIGVKK-HLAPFLPSH-PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 791 ~h--Ktf~~P~g~GGPg~G~i~v~~-~l~~~lpg~-~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+| |+|+ ++.+|++++++ ++...+... ..+.... .......+.+... ..+...++.+. ...+
T Consensus 164 ~~~~K~~~------~~~gg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~aa~~~-----~~l~ 228 (352)
T cd00616 164 FHPTKNLT------TGEGGAVVTNDEELAERARLLRNHGRDRD--RFKYEHEILGYNY--RLSEIQAAIGL-----AQLE 228 (352)
T ss_pred CCCCCCCc------ccCceEEEECCHHHHHHHHHHHHcCCCCC--CCccccceeeecc--CcCHHHHHHHH-----HHHH
Confidence 66 8873 22346666653 444322100 0000000 0000000001100 00111111111 2234
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCC-CccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCC--
Q 001579 867 GLTEASKIAILNANYMAKRLEKH--YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPV-- 941 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~-g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv-- 941 (1050)
++.+..++...+++++.++|+++ ++++...+. ....+.+.|.+.. ..+.+.+++.+.|.++||.++....|.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~L~~~gI~~~~~~~~~~~ 305 (352)
T cd00616 229 KLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDP---EAGESRDELIEALKEAGIETRVHYPPLHH 305 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECC---cCCCCHHHHHHHHHHCCCCeeeecCcccc
Confidence 56666677778999999999875 444321110 1122334444431 014678999999999999764322111
Q ss_pred ----------------------CCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 942 ----------------------PGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 942 ----------------------~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
.+.+++.++..+|++|||+++++|+
T Consensus 306 ~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 306 QPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1579999999999999999999874
No 129
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.76 E-value=4.3e-17 Score=191.47 Aligned_cols=312 Identities=13% Similarity=0.139 Sum_probs=198.2
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHH
Q 001579 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (1050)
Q Consensus 166 ~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~ 245 (1050)
..++|+|+..+|.++.+... .+ ++ |.+..+ .+....|..+...++++.+|+++|.+. +.++++|+.+.++++
T Consensus 51 ~sn~ylgl~~~p~v~~a~~~-~~-~~--~~~~~~--~s~~~~~~~~~~~~le~~la~~~g~~~--~~~~~SG~~An~~ai 122 (406)
T PRK13393 51 CSNDYLGMGQHPAVLAAMHE-AL-DT--CGAGAG--GTRNISGTNHYHVLLEAELADLHGKEA--ALLFTSGYVSNWAAL 122 (406)
T ss_pred ecccccCCCCCHHHHHHHHH-HH-HH--cCCCCc--ccccccCChHHHHHHHHHHHHHhCCCc--EEEeCCcHHHHHHHH
Confidence 45679999887666555543 33 32 222221 223333555667888999999999754 677788887777766
Q ss_pred HHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEc---Cchhhhc-c----CCCeeEEEEEcC-CCCeeEccHH
Q 001579 246 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-K----SGDVCGVLVQYP-GTEGEVLDYG 316 (1050)
Q Consensus 246 la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~---~~~~l~~-l----~~~t~~V~v~~p-n~~G~i~di~ 316 (1050)
.++. ...+++.|++++..|+++...++. .|.+++.+ |+++++. + .+++++|++..+ |.+|.+.|++
T Consensus 123 ~~l~-~~~~g~~I~~~~~~H~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~ 197 (406)
T PRK13393 123 STLG-SRLPGCVILSDELNHASMIEGIRH----SRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIA 197 (406)
T ss_pred HHhh-cCCCCCEEEEccchhHHHHHHHHH----cCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHH
Confidence 4332 111567888889999999998853 24454444 4555554 3 236788888877 6799999999
Q ss_pred HHHHHHHhCCcEEEEEecCccccCCCCCCc---------ccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCc
Q 001579 317 DFIKNAHANGVKVVMATDLLALTILKPPGE---------LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 386 (1050)
Q Consensus 317 ~I~~~ah~~galliV~a~~~alg~l~~pg~---------~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgr 386 (1050)
+|.++|+++|++++|+ +.++.|++.+.|. -..||++++. |.||.+ | ||++.++++.+.+..
T Consensus 198 ~i~~l~~~~~~~livD-ea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~---G----G~~~~~~~~~~~l~~- 268 (406)
T PRK13393 198 EICDVAEKHGAMTYLD-EVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM---G----GYITGSAALCDFIRS- 268 (406)
T ss_pred HHHHHHHHcCCEEEEE-CCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc---C----ceeeCCHHHHHHHHH-
Confidence 9999999999999993 4556555433221 1258888886 988642 2 677777776554310
Q ss_pred EEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001579 387 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1050)
Q Consensus 387 ivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~ 466 (1050)
..+.|.. ++-..+....+..+++ .++-..+. ..++..++.+++++.|+++|
T Consensus 269 ---------~~~~~~~---------------t~~~~p~~~aa~~aaL--~~~~~~~~--~~~~~~~~~~~l~~~L~~~g- 319 (406)
T PRK13393 269 ---------FASGFIF---------------TTSLPPAVAAGALASV--RHLKASSA--ERERHQDRVARLRARLDKAG- 319 (406)
T ss_pred ---------hCcCcee---------------cCccCHHHHHHHHHHH--HHHhhCHH--HHHHHHHHHHHHHHHHHHcC-
Confidence 0000100 0000111222333333 33322232 23566788999999999887
Q ss_pred EEEcCCCCccEEEEecCC---HHHHHHHHHH-cCceeeee-----c--CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 467 VEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVV-----D--SNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 467 ~~l~~~~~~~~v~i~~~~---~~~i~~~L~~-~GI~~~~~-----~--~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
++++.. ....+.+.+++ +.++.++|.+ +||.++.. . .+.||+|++.++|++|||+++++|..
T Consensus 320 ~~~~~~-~~~i~~v~~~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~ 392 (406)
T PRK13393 320 IPHLPN-PSHIVPVMVGDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSE 392 (406)
T ss_pred CCcCCC-CCCeEEEEeCCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 766532 11123333332 5789999987 59998653 1 25799999999999999999999963
No 130
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.76 E-value=7.5e-17 Score=185.21 Aligned_cols=281 Identities=12% Similarity=0.057 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHhcCCCC-cceeEecc-hHHHHHHHHHHhhhhcCCCCEEEE-cCCCChhHHHHHHHhccCCCeEEEEcC
Q 001579 211 ESLLNFQTMIADLTGLPM-SNASLLDE-GTAAAEAMAMCNNIQKGKKKTFII-ASNCHPQTIDICITRADGFDIKVVVSD 287 (1050)
Q Consensus 211 e~l~e~q~~ia~L~G~~~-anasl~d~-~Taa~eA~~la~~~~~~~gd~Vlv-s~~~Hps~~~~~~~~a~~~gi~v~~~~ 287 (1050)
+.+.+.++.+.+++|.+. ..+.++.| ||.++|+++..+. . +++++++ ..+.+..-. ...|+.+|+ +..+.
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~-~--~~~~~l~i~~G~fg~r~---~~~a~~~g~-~~~~~ 109 (349)
T TIGR01364 37 AVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL-A--EGKVADYIVTGAWSKKA---AKEAKKYGV-VNVVA 109 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC-C--CCCeEEEEECCHHHHHH---HHHHHHhCC-cEEEe
Confidence 788889999999999743 35767766 9999999887652 2 5666554 344443322 233555666 44332
Q ss_pred ---------chhhhc--cCCCeeEEEEEc-CCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEe
Q 001579 288 ---------LKDIDY--KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVG 354 (1050)
Q Consensus 288 ---------~~~l~~--l~~~t~~V~v~~-pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvg 354 (1050)
..+++. ++++++.|.+++ .|++|...+ ++++.+|++++|++ ..++|..+ +..+| |++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDa-vss~g~~~id~~~~--d~~~~ 181 (349)
T TIGR01364 110 SGKEGNYTKIPDPSTWEISEDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADM-SSNILSRPIDVSKF--GLIYA 181 (349)
T ss_pred ccccCCCCCCCCHHhcCCCCCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEc-cccccCccCCHHHc--cEEEE
Confidence 123332 456788998876 589999876 66777899999954 33555432 33444 59999
Q ss_pred cCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHH
Q 001579 355 SAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMY 434 (1050)
Q Consensus 355 s~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y 434 (1050)
++|++ +|.||+|++++++++++++++... .| +.+....+. ..-.+|+|+ ..++++.+++
T Consensus 182 ssqK~-----lgP~Glg~l~~s~~~~~~~~~~~~----------~~-~~~~~~~~~-~~~~~Tp~~---~~i~al~~al- 240 (349)
T TIGR01364 182 GAQKN-----IGPAGLTVVIVRKDLLGRASRITP----------SM-LNYKIHAEN-DSMYNTPPT---FAIYVSGLVF- 240 (349)
T ss_pred ecccc-----cCCCceEEEEECHHHHhhcccCCC----------Cc-chHHHHHhc-CCCCCCCcH---HHHHHHHHHH-
Confidence 99553 233679999999999988755211 01 111000000 011268887 6777888876
Q ss_pred HHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-C--CCcc-EEEEecCC---HHHHHHHHHHcCceeeeec--C
Q 001579 435 AVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQG-L--PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVVD--S 504 (1050)
Q Consensus 435 ~~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~--~~~~-~v~i~~~~---~~~i~~~L~~~GI~~~~~~--~ 504 (1050)
.++..+ |++++.+|..+++++++++|++++|+.... + .... .++|..++ ..++.+.+.++||.+.... .
T Consensus 241 -~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~ 319 (349)
T TIGR01364 241 -KWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHRSV 319 (349)
T ss_pred -HHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcccc
Confidence 677778 799999999999999999999994475542 2 1232 36677664 3667677888999654432 4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHHh
Q 001579 505 NTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 505 ~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+.+|+|+..+||.||||+|+++|+
T Consensus 320 g~vRvS~~~~nt~edid~l~~al~ 343 (349)
T TIGR01364 320 GGMRASIYNAMPLEGVQALVDFMK 343 (349)
T ss_pred CeeEEECcCCCCHHHHHHHHHHHH
Confidence 789999999999999999999996
No 131
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.76 E-value=3.4e-16 Score=180.88 Aligned_cols=332 Identities=19% Similarity=0.245 Sum_probs=223.0
Q ss_pred ccccccccccCcchhhhhcccccc-ccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC--eeeeccCchHHHHHHHHH
Q 001579 590 SMIPLGSCTMKLNATTEMMPVTWP-SFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLM 666 (1050)
Q Consensus 590 ~~i~lGs~t~~~~~~~~~~~~~~~-~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d--~~~l~~~sGa~ge~a~Ll 666 (1050)
+...+|+|++++..+++.+..... -...+.++ +...++.+.|.+++..+ ...++.++|+.++++++.
T Consensus 66 ~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~----------e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiK 135 (447)
T COG0160 66 AVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYY----------EPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIK 135 (447)
T ss_pred chhccCCCCHHHHHHHHHHHHHhhcccCCcccc----------hhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHH
Confidence 445789999888888887742211 01112222 33557788888887653 335778999999999999
Q ss_pred HHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhC--------C-----CEEEEEcCCCCC------------CCCHHHHH
Q 001579 667 VIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMC--------G-----MKIVSVGTDAKG------------NINIEELR 721 (1050)
Q Consensus 667 air~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~--------G-----~~vv~V~~d~~g------------~iD~e~L~ 721 (1050)
..|.|- ++...|....++||....+..+. | -.|..+|..... .-..+.++
T Consensus 136 iAr~~T-----gr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e 210 (447)
T COG0160 136 IARAYT-----GRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIE 210 (447)
T ss_pred HHHHHh-----CCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHH
Confidence 888762 12344446789999877664431 1 137777764321 11344556
Q ss_pred HHHHcC---CCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc------c--CcE
Q 001579 722 KAAEAN---RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADV 786 (1050)
Q Consensus 722 ~~i~~~---~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~------G--aDv 786 (1050)
..+.+. ..+++++++..- +..|++.+ .++++.++|++||+++|+|.+ |.|+.+.|+| | +|+
T Consensus 211 ~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEV----QtG~GRTG~~fa~E~~gv~PDi 286 (447)
T COG0160 211 RALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEV----QTGFGRTGKMFAFEHFGVEPDI 286 (447)
T ss_pred HHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc----ccCCCccccchhhhhcCCCCCE
Confidence 655432 357889988765 56777753 489999999999999999976 7899999864 3 799
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+++ .|.++ ||-.+|.+..++++....||... + ++.|++..++++.+.|..+-++
T Consensus 287 vt~--aK~ig-----~G~Pl~avv~r~ei~~~~~g~~~----------------~---Tf~GNpva~Aaa~AvL~vie~e 340 (447)
T COG0160 287 VTL--AKSLG-----GGLPLSAVVGRAEIMDWPPGGHG----------------G---TFGGNPVACAAALAVLDVIEEE 340 (447)
T ss_pred EEe--ccccc-----CCCceeEEeccHHhcccCCcccC----------------C---CCCcCHHHHHHHHHHHHHHHHc
Confidence 988 48774 45567788888888775454311 1 1346778888899999988888
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCeee--cCCCCcc-ceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC
Q 001579 867 GLTEASKIAILNANYMAKRLEKH---YPILF--RGVNGTV-AHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP 940 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~---~~v~~--~g~~g~~-~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~p 940 (1050)
+|.+. +....+||+++|.++ ++.+- .|. |.. .-|++-|-. .++....-...|.+++.++|+.+.+.. +
T Consensus 341 ~L~~~---a~~~G~~l~~~L~~l~~~~~~IgdVRG~-Glm~giE~v~d~~-t~~p~~~~~~~i~~~~~~~Glil~~~G-~ 414 (447)
T COG0160 341 NLLER---AAELGEYLRDRLEELQEKHPLIGDVRGL-GLMIGVELVKDRD-TKEPDAELAAKIVARAFERGLLLLTCG-P 414 (447)
T ss_pred cHHHH---HHHHHHHHHHHHHHHHhhcCceeccccc-ceEEEEEEecCCC-CCCCCHHHHHHHHHHHHHcCCEEeccC-C
Confidence 76654 457889999999875 54331 221 222 123322211 111111234688999999998765543 3
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 941 VPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 941 v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
..+.|||.|+...|++++|.++++|.+++.+.
T Consensus 415 ~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 415 HGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 36899999999999999999999999988764
No 132
>PRK07179 hypothetical protein; Provisional
Probab=99.76 E-value=1.2e-16 Score=187.78 Aligned_cols=286 Identities=17% Similarity=0.205 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~ 712 (1050)
...++++.+++++|.+.+ +..++|++++.+++.++. .+++.|+++...|.+....+...|.+++.++.
T Consensus 100 ~~~~le~~la~~~g~~~~-~~~~sG~~An~~~l~~l~--------~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~--- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTGFESC-LLCQSGWAANVGLLQTIA--------DPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH--- 167 (407)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhC--------CCCCEEEEECCcCHHHHHHHHHCCCeEEEecC---
Confidence 456788999999999866 557888877755444332 13467888887776555556778888776543
Q ss_pred CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCC---Ccc----cC
Q 001579 713 GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP---GYI----GA 784 (1050)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p---g~~----Ga 784 (1050)
.|+++|++++++ .++++|++.+| |.+|.+. ++++|+++|+++|+++++|+++..+..|..-. ..+ ++
T Consensus 168 --~d~~~l~~~l~~--~~~~lV~v~~v~n~tG~i~-pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~v 242 (407)
T PRK07179 168 --NDVDHLRRQIER--HGPGIIVVDSVYSTTGTIA-PLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRV 242 (407)
T ss_pred --CCHHHHHHHHHh--cCCeEEEECCCCCCCCccc-cHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCC
Confidence 699999999973 24778888887 4789998 79999999999999999999975332221100 122 46
Q ss_pred cEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
|+++.++||+|+ +++|++++++++.+.++... . .. ..++++..+. ++++.+.+..+.
T Consensus 243 di~~~S~sK~~g-------~~~G~l~~~~~~~~~~~~~~--~---------~~---~~~~t~~~~~--~aa~~aal~~~~ 299 (407)
T PRK07179 243 HFITASLAKAFA-------GRAGIITCPRELAEYVPFVS--Y---------PA---IFSSTLLPHE--IAGLEATLEVIE 299 (407)
T ss_pred CEEEeechHhhh-------ccCeEEEeCHHHHHHHHHhC--c---------Ce---eeCCCCCHHH--HHHHHHHHHHHh
Confidence 999999999884 24789998877655442100 0 00 0011111111 112233344442
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC---
Q 001579 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP--- 940 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~p--- 940 (1050)
.. .+..++...+++++.++|+++ +++. +. +++ +.+.+.. ..+...+.+.|.++||.+....+|
T Consensus 300 ~~--~~~~~~l~~~~~~l~~~L~~~g~~v~--~~-~~i---~~l~~~~-----~~~~~~~~~~L~~~GI~~~~~~~p~~~ 366 (407)
T PRK07179 300 SA--DDRRARLHANARFLREGLSELGYNIR--SE-SQI---IALETGS-----ERNTEVLRDALEERNVFGAVFCAPATP 366 (407)
T ss_pred cC--HHHHHHHHHHHHHHHHHHHHcCCCCC--CC-CCE---EEEEeCC-----HHHHHHHHHHHHHCCceEeeecCCCCC
Confidence 21 334566778899999999885 4443 21 221 2233321 123567888999999975422223
Q ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 941 -VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 941 -v~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
..+.+||+++..+|++|||+++++|++++++
T Consensus 367 ~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 367 KNRNLIRLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred CCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 1468999999999999999999999988776
No 133
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.76 E-value=8.4e-17 Score=172.81 Aligned_cols=297 Identities=16% Similarity=0.143 Sum_probs=214.9
Q ss_pred HHHHHHHhcCCCCcceeEecchHHHHHHHHH-HhhhhcCCCCEEEEcC-CCChhHHHHHHHhccCCC----eEEEEcCch
Q 001579 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIAS-NCHPQTIDICITRADGFD----IKVVVSDLK 289 (1050)
Q Consensus 216 ~q~~ia~L~G~~~anasl~d~~Taa~eA~~l-a~~~~~~~gd~Vlvs~-~~Hps~~~~~~~~a~~~g----i~v~~~~~~ 289 (1050)
+-..+|-|.|....++...|+.+.-+--.+. +++.. ++++||+++ ..+|+-..+....+.-.+ ++++. .+.
T Consensus 81 lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~--~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~-~P~ 157 (407)
T COG3844 81 LGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQ--EGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVI-APR 157 (407)
T ss_pred HHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccC--CCceEEeecCCCCCcchhhhcchhhhhcccccceeee-ChH
Confidence 3468899999998888888877755444443 34433 577888887 688887777654444333 33332 335
Q ss_pred hhhc-cCCCeeEEEEEcCCC-CeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecCccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYPGT-EGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~pn~-~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~k~~g~P~~~G 366 (1050)
+++. +++++..|++++.|+ +|...|+.+|.++||++|+++..+ =.++.|.+. .-..+|+|+.++++.++- .|
T Consensus 158 ~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wD-LAHsaGavp~~Lh~~gaDfaigcsyKYL----Ng 232 (407)
T COG3844 158 ALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWD-LAHSAGAVPVDLHAAGADFAIGCSYKYL----NG 232 (407)
T ss_pred HHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEee-hhcccCCcceeecccCCCeeeeeeceec----cC
Confidence 6666 789999999999886 899999999999999999998883 234666543 447899999999994442 47
Q ss_pred Ccce-EEEEEehhhhhcCCCcEEeEeecCCCCcceEEecc-cccccccccccCCCccchhHHHHHHHHH-HHHHhCcccH
Q 001579 367 GPHA-AFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQ-TREQHIRRDKATSNICTAQALLANMAAM-YAVYHGPEGL 443 (1050)
Q Consensus 367 GP~~-G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lq-treq~irRekaTsnict~~~l~a~~aa~-y~~~~g~~Gl 443 (1050)
|||+ ||+++.+++.+..-+++.||.-- .++ |.|.-. +--.++|| +.|++|..+.+.+-- -+.....-+|
T Consensus 233 GPGapa~l~v~~~h~e~~~~~lsgW~gh--a~p-f~m~~~y~p~~ga~r-----f~~gt~~V~s~aal~~aLDifa~~~i 304 (407)
T COG3844 233 GPGAPAGLFVAPRHRERSWPPLSGWWGH--ARP-FAMEEVYAPGPGARR-----FLCGTQPVLSLAALEGALDIFADVDI 304 (407)
T ss_pred CCCCceeEEeccccccccccccccccCC--CCc-chhhhccCcCccccc-----eeeCCcchhhhHHHhhhhhhhhhcCH
Confidence 7876 89999998887777788887431 122 444311 11246665 356666654432211 1356667789
Q ss_pred HHHHHHHHHHHHHHHHHHhcC-C--CEEEcCC----CCccEEEEecCCHHHHHHHHHHcCceeeeecCCeEEEEeccC-C
Q 001579 444 KTIAQRVHGLAGTFALGLKKL-G--TVEVQGL----PFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDET-T 515 (1050)
Q Consensus 444 ~~ia~~~~~~a~~l~~~L~~~-G--~~~l~~~----~~~~~v~i~~~~~~~i~~~L~~~GI~~~~~~~~~lris~~e~-~ 515 (1050)
.++.++...++.|+.+.++.. + ++++.++ .+-..+++..+.+.+|.+.|.++||......++.+|+.+++. +
T Consensus 305 ~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~qaLi~rGVigD~R~P~vlRfgftPlY~ 384 (407)
T COG3844 305 TELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQALIDRGVIGDFREPDVLRFGFTPLYV 384 (407)
T ss_pred HHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCcHHHHHHHHHHcCccccccCCCeeeecCcccee
Confidence 999999999999999998875 2 2677653 234468888888999999999999987665689999999985 8
Q ss_pred CHHHHHHHHHHHh
Q 001579 516 TLEDVDKLFIVFA 528 (1050)
Q Consensus 516 t~edId~lv~~l~ 528 (1050)
+.+|+-..+++|.
T Consensus 385 ~~~DVw~AV~~L~ 397 (407)
T COG3844 385 SFVDVWDAVDALE 397 (407)
T ss_pred chhHHHHHHHHHH
Confidence 9999998888885
No 134
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.76 E-value=9.6e-17 Score=181.20 Aligned_cols=173 Identities=21% Similarity=0.341 Sum_probs=135.3
Q ss_pred ccHHHH--HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHH---HhCCC
Q 001579 628 QGYQEM--FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGM 702 (1050)
Q Consensus 628 ~G~~~~--i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a---~~~G~ 702 (1050)
.|+... +++.++.++++.|.|...+..++||+ ++..++++......+++..+.||+...+|.+.-.++ +-.|+
T Consensus 79 y~w~~~~~~E~aR~~VAklInAd~~dIiFts~AT--Es~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~ 156 (428)
T KOG1549|consen 79 YGWKAEDAVEAAREQVAKLINADPSDIVFTSGAT--ESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGL 156 (428)
T ss_pred cchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCch--HHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCe
Confidence 355444 88999999999999975555555542 255566665544333312237888888898876654 45799
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCc
Q 001579 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1050)
Q Consensus 703 ~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~ 781 (1050)
+|+.+|++.+|.+|++.+++.|+ ++|++|.|...| ..|+.. |++||+++|++.|++||+|+||..+... ....+
T Consensus 157 ~Vt~lpv~~~~~~d~~~~~~~i~---~~T~lv~I~~Vnn~~gv~~-Pv~EI~~icr~~~v~v~~DaAQavG~i~-vDV~e 231 (428)
T KOG1549|consen 157 EVTYLPVEDSGLVDISKLREAIR---SKTRLVSIMHVNNEIGVLQ-PVKEIVKICREEGVQVHVDAAQAVGKIP-VDVQE 231 (428)
T ss_pred EEEEeccCccccccHHHHHHhcC---CCceEEEEEecccCccccc-cHHHHHHHhCcCCcEEEeehhhhcCCcc-ccHHH
Confidence 99999999889999999999998 899999998875 579998 7999999999999999999998644332 23457
Q ss_pred ccCcEEEeCCccccccCCCCCCCcceeeeecc
Q 001579 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 813 (1050)
Q Consensus 782 ~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~ 813 (1050)
+++|+++.++|||| |-||+|+++|++
T Consensus 232 ln~D~~s~s~HK~y------gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 232 LNADFLSISAHKIY------GPPGIGALYVRR 257 (428)
T ss_pred cCchheeeeccccc------CCCcceEEEEcc
Confidence 89999999999988 456899999996
No 135
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.76 E-value=1.3e-16 Score=188.40 Aligned_cols=336 Identities=16% Similarity=0.205 Sum_probs=211.5
Q ss_pred cccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHH
Q 001579 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVI 668 (1050)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llai 668 (1050)
...+|++.+++..++..+. ....+....-+. .+...++.+.|+++++ ++.+ ++.+||+++++++++.+
T Consensus 53 ~~~lGh~~p~v~~ai~~q~-~~~~~~~~~~~~--------~~~~~~la~~l~~~~p~~~~~v-~f~~sGseA~e~A~kla 122 (423)
T PRK05964 53 VATHGHNHPYIDQAIREQL-DRLDHVIFAGFT--------HEPAERLAQRLVALTPGGLDHV-FFSDSGSVAVEVALKMA 122 (423)
T ss_pred hccCCCCCHHHHHHHHHHH-hhCCCccccccC--------CHHHHHHHHHHHHhCCCCCCEE-EEeCCcHHHHHHHHHHH
Confidence 3467888877776665552 221111110011 1234478888999884 4444 56789999999999999
Q ss_pred HHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC------------CEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEE
Q 001579 669 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAK--GNINIEELRKAAEANRDNLST 733 (1050)
Q Consensus 669 r~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G------------~~vv~V~~d~~--g~iD~e~L~~~i~~~~~~taa 733 (1050)
|.|...+|.++|.+|| ...++||....+....+ ..+..+++..+ ...++++|++.++++.+++++
T Consensus 123 r~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaa 202 (423)
T PRK05964 123 LQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAA 202 (423)
T ss_pred HHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEE
Confidence 9987767755566666 57789997655433211 12334444221 122388999999876678989
Q ss_pred EEEEc-C-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCccccccCCC
Q 001579 734 LMVTY-P-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHG 800 (1050)
Q Consensus 734 V~vt~-P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~hKtf~~P~g 800 (1050)
|+++. . +..|+.. +.+++|.++|++||+++++|+++ .|+.++|.+ .+|++++ .|+|+
T Consensus 203 vi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~----tg~gr~G~~~a~~~~~v~pDi~~~--~K~l~---- 272 (423)
T PRK05964 203 FIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA----TGFGRTGTLFACEQAGVSPDIMCL--SKGLT---- 272 (423)
T ss_pred EEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh----hCCCcCcchhHHHhcCCCCCeeee--ehhhh----
Confidence 88864 2 3346543 35999999999999999999874 445455432 3688766 59884
Q ss_pred CCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHH
Q 001579 801 GGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNAN 880 (1050)
Q Consensus 801 ~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~ 880 (1050)
+|+-.+|.+++++++...+..... . . . ....+++.|++..++++.+.+..+..+++. ++...+.+
T Consensus 273 gG~~p~~av~~~~~i~~~~~~~~~-~--------~--~-~~~~~T~~~np~~~aaa~a~l~~l~~~~~~---~~~~~~g~ 337 (423)
T PRK05964 273 GGYLPLAATLCTAEIFEAFYSDDR-A--------K--A-FMHSPSYTANPLACAAANASLDLFEDEPVL---ERVAALSA 337 (423)
T ss_pred cCcccceEEEEcHHHHHhhhcCCc-c--------c--c-cccCCCCCcCHHHHHHHHHHHHHHHhcCHH---HHHHHHHH
Confidence 343457778888887766531100 0 0 0 001112334566666777777777655544 45556788
Q ss_pred HHHHHHhcc--CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHH
Q 001579 881 YMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKE 956 (1050)
Q Consensus 881 yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~e 956 (1050)
++.++|+++ ++.+ ..|. |.. +.+.+..- ..+.....+.++|.++|+.+... .+.+|++|+..+|++
T Consensus 338 ~l~~~l~~l~~~~~i~~vrg~-Gl~---~~i~l~~~--~~~~~~~~l~~~l~~~Gv~v~~~----~~~lR~~p~l~~t~e 407 (423)
T PRK05964 338 GLAEGLEPFRDLPGVADVRVL-GAI---GAVELDRP--VLERDGPALRAFALERGVLLRPL----GNTIYLMPPYIITAE 407 (423)
T ss_pred HHHHHHHhhccCCCeEEeecc-cEE---EEEEeccC--cchhHHHHHHHHHHHCCeEEEec----CCEEEEeCCcccCHH
Confidence 888888765 2221 1121 211 22333210 00012567889999999987532 368999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 001579 957 ELDRYCDALISIREE 971 (1050)
Q Consensus 957 eid~fv~aL~~i~~e 971 (1050)
|||+++++|.+++.|
T Consensus 408 dId~~v~~l~~al~~ 422 (423)
T PRK05964 408 ELDRITDAIVEVADE 422 (423)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998876
No 136
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.76 E-value=1.2e-16 Score=182.12 Aligned_cols=295 Identities=18% Similarity=0.176 Sum_probs=193.9
Q ss_pred ccHHHHHHHHHHHHHHhhCCC---eeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d---~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++..++++++....|.. ...+..++|+++..+++.++. .++++|+++...|+++...++..|+++
T Consensus 36 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--------~~g~~vl~~~~~~~~~~~~~~~~~~~~ 107 (350)
T cd00609 36 PGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL--------NPGDEVLVPDPTYPGYEAAARLAGAEV 107 (350)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHCCCEE
Confidence 566666666777776665521 123445566665544333221 246789999999998888899999999
Q ss_pred EEEcCCCCCCCCH--HHHHHHHHcCCCCEEEEEEEcCC-Ccccccc--CHHHHHHHHHHcCCEEEEecccccccc-cc--
Q 001579 705 VSVGTDAKGNINI--EELRKAAEANRDNLSTLMVTYPS-THGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQV-GL-- 776 (1050)
Q Consensus 705 v~V~~d~~g~iD~--e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~--di~eI~~la~~~G~~v~vD~A~~~al~-gl-- 776 (1050)
+.++.++++..+. ++++.+++ +++++|++++|+ .+|.+.+ ++++|.++|+++|+++++|+++..... +.
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~---~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~ 184 (350)
T cd00609 108 VPVPLDEEGGFLLDLELLEAAKT---PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP 184 (350)
T ss_pred EEEecccccCCccCHHHHHhhcC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccc
Confidence 9999988877665 66766654 789999999985 6898862 355666899999999999998643221 11
Q ss_pred ---CCCCcccCcEEEeCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 777 ---TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 777 ---~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
..++..+.|++..++||+|+ .+|+++|++++++ .+.+.+.... ...+.+.+ . ..
T Consensus 185 ~~~~~~~~~~~~~~~~s~~K~~~----~~g~~~G~i~~~~~~~~~~~~~~~------------~~~~~~~~--~----~~ 242 (350)
T cd00609 185 PALALLDAYERVIVLRSFSKTFG----LPGLRIGYLIAPPEELLERLKKLL------------PYTTSGPS--T----LS 242 (350)
T ss_pred ccccCcCccCcEEEEeecccccC----CcccceEEEecCHHHHHHHHHHHH------------HhcccCCC--h----HH
Confidence 22445678999999999985 3567899999988 6665543210 00001111 1 11
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCC
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~G 931 (1050)
..+.+..+.... +++++..+...++++++.+.|++. ..... .+.+ ..-+.+.+.. +.+...+.+.|.++|
T Consensus 243 ~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~--g~~~~~~~~~-----~~~~~~~~~~l~~~g 313 (350)
T cd00609 243 QAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVV-KPSG--GFFLWLDLPE-----GDDEEFLERLLLEAG 313 (350)
T ss_pred HHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCc--cEEEEEecCC-----CChHHHHHHHHHhCC
Confidence 112233333322 677888888889999999999886 22211 1111 1223444431 224567778888889
Q ss_pred cccCCCC-CC--CCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 932 FHGPTMS-WP--VPGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 932 i~~~~~~-~p--v~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
+.+.... |. ....+||++... ++|+++++++|+
T Consensus 314 i~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 314 VVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred EEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 9876432 22 357899999877 999999999886
No 137
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.76 E-value=5.8e-17 Score=190.37 Aligned_cols=312 Identities=14% Similarity=0.171 Sum_probs=197.8
Q ss_pred CccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHH
Q 001579 165 KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAM 244 (1050)
Q Consensus 165 ~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~ 244 (1050)
...++|+|.+.+|.++.+... . +.+.++ . +..+....|..+...++++.+|+++|.+. +.++.+|+.+.+++
T Consensus 51 ~~s~dylgl~~~p~v~~a~~~-~-~~~~~~--~--~~~s~~~~g~~~~~~~l~~~la~~~g~~~--~~~~~sG~~an~~a 122 (407)
T PRK09064 51 WCSNDYLGMGQHPKVIEAMIE-A-LDRCGA--G--AGGTRNISGTNHYHVELERELADLHGKEA--ALVFTSGYVSNDAT 122 (407)
T ss_pred EECCCCcCCCCCHHHHHHHHH-H-HHHcCC--C--CCCcCcCccCHHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHHH
Confidence 345678999976554444432 2 232221 1 11223333556677889999999999654 56778887776655
Q ss_pred HHH-hhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEc---Cchhhhc-cC----CCeeEEEEEcC-CCCeeEcc
Q 001579 245 AMC-NNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KS----GDVCGVLVQYP-GTEGEVLD 314 (1050)
Q Consensus 245 ~la-~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~---~~~~l~~-l~----~~t~~V~v~~p-n~~G~i~d 314 (1050)
+.. .+. .+++.|+.+...|.+.+..++. .++++... |++++++ +. +++++|++.++ |.+|.+.|
T Consensus 123 i~~l~~~--~~~~~i~~~~~~h~s~~~~~~~----~~~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~ 196 (407)
T PRK09064 123 LSTLAKL--IPDCVIFSDELNHASMIEGIRR----SRCEKHIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP 196 (407)
T ss_pred HHHHhCC--CCCCEEEEeCcchHHHHHHHHH----cCCcEEEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC
Confidence 543 222 2567777777889999888753 24444433 4456655 32 46888888887 77999999
Q ss_pred HHHHHHHHHhCCcEEEEEecCccccCCCCCC-----c----ccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCC
Q 001579 315 YGDFIKNAHANGVKVVMATDLLALTILKPPG-----E----LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1050)
Q Consensus 315 i~~I~~~ah~~galliV~a~~~alg~l~~pg-----~----~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lp 384 (1050)
+++|.++|+++|++++| ++.+++|++.+.| . ...||++++. |.||.+ | ||+++++++++.+.
T Consensus 197 l~~i~~l~~~~~~~liv-DEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~---G----G~~~~~~~~~~~l~ 268 (407)
T PRK09064 197 IAEICDLADKYNALTYL-DEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVM---G----GYIAGSAALVDAVR 268 (407)
T ss_pred HHHHHHHHHHcCCEEEE-ECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhcc---C----ceEecCHHHHHHHH
Confidence 99999999999999999 3555655443222 1 1358999886 888642 2 68888887766541
Q ss_pred CcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001579 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1050)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1050)
.. .+.|.+ |... ++....+..+++ .++... ....+++.++.+++.+.|+++
T Consensus 269 ~~----------~~~~~~--------------t~~~-~~~~~~aa~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~ 319 (407)
T PRK09064 269 SY----------APGFIF--------------TTSL-PPAIAAAALASI--RHLKES--NEERERHQERAAKLKAALDAA 319 (407)
T ss_pred Hh----------Cccccc--------------cCcC-CHHHHHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHc
Confidence 00 000100 0000 011122223333 344333 345678889999999999998
Q ss_pred CCEEEcCCCCccEEEEecCC---HHHHHHHHHH-cCceeeeec-------CCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 465 GTVEVQGLPFFDTVKVKCAD---AHAIASAAYK-IEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 465 G~~~l~~~~~~~~v~i~~~~---~~~i~~~L~~-~GI~~~~~~-------~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
| ++++.+. ...+.+.+++ +.++.++|.+ +||.++... .+.+|+|++.++|++|||+++++|..
T Consensus 320 g-~~~~~~~-~~iv~i~~~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~ 393 (407)
T PRK09064 320 G-IPVMPNE-SHIVPVMVGDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVE 393 (407)
T ss_pred C-CCCCCCC-CCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 8 8766421 1123344432 6789998875 699986531 25799999999999999999999963
No 138
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.76 E-value=2.1e-16 Score=183.28 Aligned_cols=292 Identities=13% Similarity=0.147 Sum_probs=183.4
Q ss_pred hhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 625 DQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 625 e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
....|..+.+.++++.+++++|.+.+ +..++|+.++.+. +..+ . ++++.|++....|++.-..+.......
T Consensus 49 ~~~~g~~~~~~~~e~~la~~~~~~~~-l~~~sG~~a~~~~---~~~~---~--~~~d~ii~d~~~H~sv~~~~~~~~~~~ 119 (370)
T PRK05937 49 RAILGPSSLLDDLEHKIAHFHGAPEA-FIVPSGYMANLGL---CAHL---S--SVTDYVLWDEQVHISVVYSLSVISGWH 119 (370)
T ss_pred CcccCChHHHHHHHHHHHHHhCCCeE-EEECChHHHHHHH---HHHh---C--CCCCEEEEEhhhhHHHHHHHHHcCCce
Confidence 44567778899999999999999865 6677887655322 2211 1 135777787888876655555433222
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCC---CCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCC
Q 001579 705 VSVGTDAKGNINIEELRKAAEANR---DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~---~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg 780 (1050)
+.+ +..|+++|++++++.. +++.+|++++++ ..|.+. |+++|+++|+++|++++||++|..+..+..--|
T Consensus 120 ~~~-----~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~-pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g 193 (370)
T PRK05937 120 QSF-----RHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLA-PLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKG 193 (370)
T ss_pred EEe-----cCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCccccccCCCCCc
Confidence 333 3479999999997532 356777888884 689998 799999999999999999999865433321111
Q ss_pred ---cccC---cEEEeCCccccccCCCCCCCcceeeeecccccCCC--CCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 781 ---YIGA---DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL--PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 781 ---~~Ga---Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~l--pg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
.+|. |+...+++|.|+ ++|.|+++.++...... +... . .. ... ++.+
T Consensus 194 ~~~~~~~~~~~~~~~tlsK~~g------~~G~~vl~~~~~~~~~~~~~~~~-~---------~s---~~~--~~~~---- 248 (370)
T PRK05937 194 FCHSLGYENFYAVLVTYSKALG------SMGAALLSSSEVKQDLMLNSPPL-R---------YS---TGL--PPHL---- 248 (370)
T ss_pred hHHhhCCCCCcEEEEechhhhh------cCceEEEcCHHHHHHHHHhCCCC-e---------ec---CCC--CHHH----
Confidence 2342 355667789773 34667766544211111 1100 0 00 111 1111
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCc
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi 932 (1050)
+.+..+.+..+..+| ....++...+.+++.+.|.... . +. ... +.++ +....++.+.|.++||
T Consensus 249 ~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~----~---~~-~~~--i~~~------~~~~~~~~~~L~~~gi 311 (370)
T PRK05937 249 LISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA----P---GC-VQP--IFLP------GISEQELYSKLVETGI 311 (370)
T ss_pred HHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC----C---CC-EEE--EEeC------ChhHHHHHHHHHHCCe
Confidence 122233444443444 2334455566777777665320 0 11 111 2222 2346789999999999
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 933 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 933 ~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
.+....+|..+.+|++++..+|+||||+|+++|.++++++.
T Consensus 312 ~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 312 RVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred eEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 88755566667899999999999999999999999887653
No 139
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.76 E-value=6.1e-17 Score=186.83 Aligned_cols=313 Identities=13% Similarity=0.086 Sum_probs=203.1
Q ss_pred CCCCCCCCCcHHHHHHHHhCC-Cc-ccccCCChhHH---hhhHHHHHHHHHHHHHHhcCCCC-cceeEe-cchHHHHHHH
Q 001579 172 GMGYYNTHVPPVILRNIMENP-AW-YTQYTPYQAEI---AQGRLESLLNFQTMIADLTGLPM-SNASLL-DEGTAAAEAM 244 (1050)
Q Consensus 172 G~g~~~~~~p~~i~~~i~~~~-~~-~t~ytpyq~ei---sqG~le~l~e~q~~ia~L~G~~~-anasl~-d~~Taa~eA~ 244 (1050)
..| |+.+|+.+.+.+.... .| -+..+ ..++ +..-.+.+.+.++.+++++|.+. ..+.++ .+||+++||+
T Consensus 8 ~pG--P~~~p~~V~~a~~~~~~~~~~~~~g--~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~ 83 (360)
T PRK05355 8 SAG--PAMLPEEVLEQAQQELLDWNGSGMS--VMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMV 83 (360)
T ss_pred cCC--CCCCCHHHHHHHHHHhhccccCCcc--ccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHH
Confidence 566 6678888865555321 11 01111 1111 22223678888999999999743 334454 7889999998
Q ss_pred HHHhhhhcCCCCEEE-EcCCCChhHHHHHHHhccCCCeEEEEc--Cc-------hhhhc--cCCCeeEEEEEc-CCCCee
Q 001579 245 AMCNNIQKGKKKTFI-IASNCHPQTIDICITRADGFDIKVVVS--DL-------KDIDY--KSGDVCGVLVQY-PGTEGE 311 (1050)
Q Consensus 245 ~la~~~~~~~gd~Vl-vs~~~Hps~~~~~~~~a~~~gi~v~~~--~~-------~~l~~--l~~~t~~V~v~~-pn~~G~ 311 (1050)
++.+- . ++++++ +..+.+..-.. ..++.+|.. .++ +. .++++ ++++++.|.+++ .|++|.
T Consensus 84 ~~nl~-~--~g~~~l~i~~G~fg~r~~---~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv 156 (360)
T PRK05355 84 PMNLL-G--GGKKADYVDTGSWSKKAI---KEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGT 156 (360)
T ss_pred HHhcC-C--CCCeEEEEECCHHHHHHH---HHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceE
Confidence 87653 2 445544 44455533332 223445544 222 21 12222 666888898775 689999
Q ss_pred Ec-cHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEe
Q 001579 312 VL-DYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVG 389 (1050)
Q Consensus 312 i~-di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG 389 (1050)
+. |+++| +|++++|++ ..++|..+ +..+| |++++++|++ +|.||+|++++++++++++.+.+ +
T Consensus 157 ~~~~i~~i------~g~l~vVDa-vss~g~~~idv~~~--d~~~~ssqK~-----lgP~Glg~l~~s~~~l~~~~~~~-~ 221 (360)
T PRK05355 157 EFHELPDT------GDVPLVADM-SSDILSRPIDVSKF--GLIYAGAQKN-----IGPAGLTIVIVREDLLGRALPSI-P 221 (360)
T ss_pred ecCccccc------CCCcEEEEc-CccccCccCCHHHc--cEEEEecccc-----ccCCceEEEEECHHHHhhcccCC-C
Confidence 98 88877 799999954 33555443 33455 5999999554 23367999999999998876531 1
Q ss_pred EeecCCCCcceEEecccccccccc-c-ccCCCccchhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCC
Q 001579 390 VSIDSSGKPALRVAMQTREQHIRR-D-KATSNICTAQALLANMAAMYAVYHGPE-GLKTIAQRVHGLAGTFALGLKKLGT 466 (1050)
Q Consensus 390 ~s~d~~g~~~~~l~lqtreq~irR-e-kaTsnict~~~l~a~~aa~y~~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~ 466 (1050)
..+.+.. ...+ + .+|+|+ ..++++.+++ .++-.+ |++++.+|..+++++++++|+++|.
T Consensus 222 ----------~~~~~~~---~~~~~~~~~Tp~~---~~i~aL~~aL--~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~ 283 (360)
T PRK05355 222 ----------SMLDYKT---HADNDSMYNTPPT---FAIYLAGLVF--KWLKEQGGVAAMEKRNQEKAALLYDAIDSSDF 283 (360)
T ss_pred ----------hHHHHHH---HHhcCCccCCCcH---HHHHHHHHHH--HHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1111110 0111 1 278887 7788888876 666678 8999999999999999999999982
Q ss_pred EEEcCC--CCcc-EEEEecCC---HHHHHHHHHHcCceeeee--cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 467 VEVQGL--PFFD-TVKVKCAD---AHAIASAAYKIEMNLRVV--DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 467 ~~l~~~--~~~~-~v~i~~~~---~~~i~~~L~~~GI~~~~~--~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+..+.+ ...+ .++|..++ ..++.+.+.++||.+... ..+.+|+|+..+||.+|||+|+++|+
T Consensus 284 ~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~ 353 (360)
T PRK05355 284 YRNPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMK 353 (360)
T ss_pred cccCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHH
Confidence 233322 2333 37777766 356767888899987433 24789999999999999999999996
No 140
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.76 E-value=8.5e-17 Score=181.63 Aligned_cols=321 Identities=18% Similarity=0.203 Sum_probs=197.6
Q ss_pred ccCCCCCCCCCcHHHHHHHHhCCCccccc--CCChhHHhhhHH--HHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHH
Q 001579 170 FIGMGYYNTHVPPVILRNIMENPAWYTQY--TPYQAEIAQGRL--ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (1050)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~~~~~~~t~y--tpyq~eisqG~l--e~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~ 245 (1050)
|+..+..+. +|+.|.+.+.. |++.| .|-.. +-|+- .++.+.++.||+|+|+++.++++++++|.++..++
T Consensus 46 yld~~at~p-~~~~Vldam~~---~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl 119 (428)
T KOG1549|consen 46 YLDNQATGP-MDPRVLDAMLP---YLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVL 119 (428)
T ss_pred EEecCcCCC-CCHHHHHHHHH---HHHHhhcCCCcc--ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHH
Confidence 445554443 45555445553 44444 23222 23333 34899999999999999999999999994444333
Q ss_pred HHhhhhcCCCC----EEEEcCCCChhHHHHHHHhccCCCeEEEEcCch--------hhhc-cCCCeeEEEEEcC-CCCee
Q 001579 246 MCNNIQKGKKK----TFIIASNCHPQTIDICITRADGFDIKVVVSDLK--------DIDY-KSGDVCGVLVQYP-GTEGE 311 (1050)
Q Consensus 246 la~~~~~~~gd----~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~--------~l~~-l~~~t~~V~v~~p-n~~G~ 311 (1050)
....+. .++ +||+.+.+||++...|+.+. ..|++++.+|.+ .++. ++++|++|.+..- |..|+
T Consensus 120 ~~v~~~--~~~~~~k~iitl~~eH~~v~~s~~~l~-~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv 196 (428)
T KOG1549|consen 120 KGVARF--FGDKTKKHIITLQTEHPCVLDSCRALQ-EEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGV 196 (428)
T ss_pred HHhhcc--ccccccceEEEecccCcchhHHHHHHH-hcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCccc
Confidence 222221 233 89999999999999998764 468999999763 3444 7899999998875 78999
Q ss_pred EccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecCccccccCCCCCcceEEEEEehh--hhhcCCCcEE
Q 001579 312 VLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQE--YKRMMPGRIV 388 (1050)
Q Consensus 312 i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~--~~r~lpgriv 388 (1050)
+.|+++|+++|++.|+.+++++ .++.|..+ +..++|+|+++.++++| ||.|+.|+||++++ .++.. +.+.
T Consensus 197 ~~Pv~EI~~icr~~~v~v~~Da-AQavG~i~vDV~eln~D~~s~s~HK~-----ygp~~iGaLYvr~~~~~~~~~-p~~~ 269 (428)
T KOG1549|consen 197 LQPVKEIVKICREEGVQVHVDA-AQAVGKIPVDVQELNADFLSISAHKI-----YGPPGIGALYVRRKRPRLRVE-PPLS 269 (428)
T ss_pred cccHHHHHHHhCcCCcEEEeeh-hhhcCCccccHHHcCchheeeecccc-----cCCCcceEEEEccCCCccccc-Cccc
Confidence 9999999999999999999944 34677553 56899999999999665 34567999999972 23323 3344
Q ss_pred eEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhc-CCCE
Q 001579 389 GVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK-LGTV 467 (1050)
Q Consensus 389 G~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~-~G~~ 467 (1050)
| |. |-|. .+.||-++..+-++ -+++-..-....+.+.+.++ +...+..++.. +.++
T Consensus 270 G------Gg-------q~r~----~rsGT~~~~~~~~~---gsA~e~~~~~~~~~~~~~~~---~~~~ll~~i~~~~~~~ 326 (428)
T KOG1549|consen 270 G------GG-------QERG----LRSGTVATPLAVGL---GSAAEFVNKEMAYDEAIIKR---LSEKLLMGIGQSLPEV 326 (428)
T ss_pred C------Cc-------cccc----cccCCcCchhhhhh---HHHHHHHHhhcchhHHHHHH---HHHHHHHHHhhhCchh
Confidence 4 11 1111 34577776443333 33431122222233444443 44555555433 2213
Q ss_pred EEcCC-C--CccEEEEecC---C---HHHHHHHHHHcCce-----ee--e----------ecCCeEEEEeccCCCHHHHH
Q 001579 468 EVQGL-P--FFDTVKVKCA---D---AHAIASAAYKIEMN-----LR--V----------VDSNTVTASFDETTTLEDVD 521 (1050)
Q Consensus 468 ~l~~~-~--~~~~v~i~~~---~---~~~i~~~L~~~GI~-----~~--~----------~~~~~lris~~e~~t~edId 521 (1050)
.+.+. + .-..+.|.++ + ..+..+....-|.. +. . .....||||+.-+||.+|++
T Consensus 327 ~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~ 406 (428)
T KOG1549|consen 327 TLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDID 406 (428)
T ss_pred hccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHH
Confidence 33322 1 1223444444 1 11111111111110 00 0 01467999999999999999
Q ss_pred HHHHHHhC
Q 001579 522 KLFIVFAG 529 (1050)
Q Consensus 522 ~lv~~l~~ 529 (1050)
++++.+..
T Consensus 407 ~~~~~i~~ 414 (428)
T KOG1549|consen 407 YLVDAIKK 414 (428)
T ss_pred HHHHHHHH
Confidence 99999864
No 141
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.76 E-value=8.4e-17 Score=189.21 Aligned_cols=310 Identities=14% Similarity=0.147 Sum_probs=194.7
Q ss_pred cccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHH
Q 001579 167 YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM 246 (1050)
Q Consensus 167 ~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~l 246 (1050)
.++|+|.+.+|.++.+.+. .+ ++.+ +.. ..+....|..+...++++.+|+++|.+. +.++.+|+.+.++++.
T Consensus 53 sn~yl~l~~~p~v~~a~~~-~~-~~~~--~~~--~~s~~~~~~~~~~~~Le~~la~~~g~~~--~i~~~sG~~a~~~~i~ 124 (410)
T PRK13392 53 SNDYLGMGQHPDVIGAMVD-AL-DRYG--AGA--GGTRNISGTSHPHVLLERELADLHGKES--ALLFTSGYVSNDAALS 124 (410)
T ss_pred CCCccCCCCCHHHHHHHHH-HH-HHcC--CCC--chhhhcccChHHHHHHHHHHHHHhCCCC--EEEECcHHHHHHHHHH
Confidence 4678888876554444442 22 2221 211 1222333455567789999999999753 5677778766666554
Q ss_pred HhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcC---chhhhc-c----CCCeeEEEEEcC-CCCeeEccHHH
Q 001579 247 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY-K----SGDVCGVLVQYP-GTEGEVLDYGD 317 (1050)
Q Consensus 247 a~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~---~~~l~~-l----~~~t~~V~v~~p-n~~G~i~di~~ 317 (1050)
++.. ..+++.|+++...|+++...++. .|.+++.++ .+++++ + ++++++|++.+| |.+|.+.|+++
T Consensus 125 ~l~~-~~~g~~vi~~~~~h~s~~~~~~~----~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~ 199 (410)
T PRK13392 125 TLGK-LLPGCVILSDALNHASMIEGIRR----SGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEA 199 (410)
T ss_pred HHhc-CCCCCEEEEehhhhHHHHHHHHH----cCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHH
Confidence 3311 12678899988999999877642 456655543 333433 2 357899999988 78999999999
Q ss_pred HHHHHHhCCcEEEEEecCccccCCCCCC---------cccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcE
Q 001579 318 FIKNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1050)
Q Consensus 318 I~~~ah~~galliV~a~~~alg~l~~pg---------~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgri 387 (1050)
|.++|+++|++++|+ +.+++|.+.+.+ .-.+|+++++. |.||.+ + ||++.++++.+.+-..
T Consensus 200 i~~l~~~~~~~livD-ea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~------G-G~~~~~~~~~~~l~~~- 270 (410)
T PRK13392 200 ICDLADRYNALTYVD-EVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL------G-GYIAASADLIDFVRSF- 270 (410)
T ss_pred HHHHHHHcCCEEEEE-CCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc------c-chhhcCHHHHHHHHHh-
Confidence 999999999999993 455655442221 11468888887 888753 2 6777777766543100
Q ss_pred EeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCE
Q 001579 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTV 467 (1050)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~ 467 (1050)
.+.|.. ++.. ++....+..+++ ..+... .+..+++.++.+++++.|+++| +
T Consensus 271 ---------~~~~~~--------------s~~~-~~~~~~a~~aaL--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~ 321 (410)
T PRK13392 271 ---------APGFIF--------------TTAL-PPAVAAGATAAI--RHLKTS--QTERDAHQDRVAALKAKLNANG-I 321 (410)
T ss_pred ---------Ccchhc--------------cCcC-CHHHHHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-C
Confidence 000000 0010 001222333333 222222 3445777888999999999987 8
Q ss_pred EEcCCCCccEEEEecCC---HHHHHHHHH-HcCceeeeec-------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 468 EVQGLPFFDTVKVKCAD---AHAIASAAY-KIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 468 ~l~~~~~~~~v~i~~~~---~~~i~~~L~-~~GI~~~~~~-------~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
++..+ ..+.+.+..+. +.++.++|. ++||.++... ...+|++++..+|++|+|+++++|.
T Consensus 322 ~~~~~-~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~ 392 (410)
T PRK13392 322 PVMPS-PSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALV 392 (410)
T ss_pred CCCCC-CCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 76532 11123333332 568999886 6799987531 2579999999999999999999996
No 142
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.75 E-value=4.5e-16 Score=182.48 Aligned_cols=317 Identities=18% Similarity=0.219 Sum_probs=204.0
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
+.+|++..++..++..+.... .+. .+..+ .+...++++.|++++|.+.+ +..+||++++++++.++|.|
T Consensus 53 ~~~Gh~~~~i~~a~~~~~~~~-~~~--~~~~~-------~~~~~~l~~~l~~~~~~~~~-~~~~SGs~A~e~al~~a~~~ 121 (401)
T PRK00854 53 VNQGHCHPKILAAMVEQAGRL-TLT--SRAFR-------NDQLAPLYEELAALTGSHKV-LPMNSGAEAVETAIKAVRKW 121 (401)
T ss_pred ccCCCCCHHHHHHHHHHHhhc-ccc--ccccC-------CHHHHHHHHHHHhhCCCCEE-EEeCCcHHHHHHHHHHHHHH
Confidence 457888777666655542221 111 11111 13456899999999998754 66789999999999988887
Q ss_pred HHh-cCCC-CCCEEE-EcCCCCCccHHHHHhC------------CCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEE
Q 001579 672 HKA-RGDH-HRNVCI-IPVSAHGTNPATAAMC------------GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMV 736 (1050)
Q Consensus 672 ~~~-~G~~-~r~~Vl-ip~saHgt~pa~a~~~------------G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~v 736 (1050)
+.. +|.+ +|++|| ...+.||+........ ...+..++. .|+++|++++. +++++|++
T Consensus 122 ~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~---~~~~aii~ 193 (401)
T PRK00854 122 GYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-----GDAEALEAAIT---PNTVAFLV 193 (401)
T ss_pred HHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhC---CCeEEEEE
Confidence 532 2322 234554 5778899865543211 123444443 48999999996 78999999
Q ss_pred EcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCC--------cccCcEEEeCCccccccCCCCCCC
Q 001579 737 TYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGP 804 (1050)
Q Consensus 737 t~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg--------~~GaDv~~~~~hKtf~~P~g~GGP 804 (1050)
+.| +..|.+.+ .+++|+++|++||+++++|+++. |+.+.| ...+|++++ .|+|+ +|+.
T Consensus 194 e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~----g~g~~g~~~~~~~~g~~~D~~~~--~K~l~----gg~~ 263 (401)
T PRK00854 194 EPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT----GLGRTGKLLAEEHEGIEADVTLI--GKALS----GGFY 263 (401)
T ss_pred ccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh----CCCCCchHhHHhhcCCCCCEEEe--ccccc----CCcc
Confidence 998 46787762 29999999999999999999863 232222 124688887 39884 3446
Q ss_pred cceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHH
Q 001579 805 GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAK 884 (1050)
Q Consensus 805 g~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~ 884 (1050)
.+|.+++++++...+.... ++ ...+ +++..++++.+.+..+..+++ .++...+++++.+
T Consensus 264 ~ig~v~~~~~~~~~l~~~~---------~~-----~t~~----~~~~~~aa~~a~L~~l~~~~~---~~~~~~~~~~l~~ 322 (401)
T PRK00854 264 PVSAVLSNSEVLGVLKPGQ---------HG-----STFG----GNPLACAVARAALKVLTEEGM---IENAAEMGAYFLE 322 (401)
T ss_pred CeEEEEEcHHHHhcccCCC---------CC-----CCCC----cCHHHHHHHHHHHHHHHHcCH---HHHHHHHHHHHHH
Confidence 7899999888766553100 00 0111 233334445556665544443 3445567889999
Q ss_pred HHhcc-CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHH
Q 001579 885 RLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRY 961 (1050)
Q Consensus 885 ~L~~~-~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~f 961 (1050)
+|++. +... ..+ .+. .+.+.+.+ ...+..+++++|.++||.+.... .+.||++|+..++++|||++
T Consensus 323 ~L~~~~~~~~~~~~g-~g~---~~~i~~~~----~~~~~~~~~~~L~~~GV~v~~~~---~~~lR~~p~~~~t~e~i~~~ 391 (401)
T PRK00854 323 GLRSIRSNIVREVRG-RGL---MLAVELEP----EAGGARQYCEALKERGLLAKDTH---DHTIRLAPPLVITREQVDWA 391 (401)
T ss_pred HHHhhccCceEEEec-cce---EEEEEEec----CchhHHHHHHHHHHCCeEEecCC---CCEEEEeCCcccCHHHHHHH
Confidence 99875 3221 111 122 13333321 11346789999999999975322 47999999999999999999
Q ss_pred HHHHHHHH
Q 001579 962 CDALISIR 969 (1050)
Q Consensus 962 v~aL~~i~ 969 (1050)
+++|++++
T Consensus 392 i~~l~~~l 399 (401)
T PRK00854 392 LEQIAKVL 399 (401)
T ss_pred HHHHHHHh
Confidence 99998775
No 143
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.75 E-value=9.4e-17 Score=183.96 Aligned_cols=291 Identities=18% Similarity=0.201 Sum_probs=189.8
Q ss_pred cHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEc
Q 001579 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~ 708 (1050)
|......++++.+++++|.+.. +.+++|+++.++++.++. .++++||++...|+.....+...|.+++.++
T Consensus 43 ~~~~~~~~l~~~la~~~~~~~~-iv~~sg~~a~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~ 113 (349)
T cd06454 43 GTSDLHEELEEELAEFHGKEAA-LVFSSGYAANDGVLSTLA--------GKGDLIISDSLNHASIIDGIRLSGAKKRIFK 113 (349)
T ss_pred CCchHHHHHHHHHHHHhCCCCE-EEeccHHHHHHHHHHHhc--------CCCCEEEEehhhhHHHHHHHHHcCCceEEec
Confidence 4445667889999999998754 566778776654433221 2457899998888766666778899998876
Q ss_pred CCCCCCCCHHHHHHHHHcCC--CCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEecccccccccc-------CC
Q 001579 709 TDAKGNINIEELRKAAEANR--DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-------TS 778 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~--~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl-------~~ 778 (1050)
. +|.+++++.+++.. +++++|++++| |.+|++. ++++|+++|+++|+++++|+++..+..+. ..
T Consensus 114 ~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~-~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~ 187 (349)
T cd06454 114 H-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIA-PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFG 187 (349)
T ss_pred C-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCcc-CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhc
Confidence 3 58899999997532 46788888888 4689997 79999999999999999999974322211 01
Q ss_pred CCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHH
Q 001579 779 PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1050)
Q Consensus 779 pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1050)
....+.|+++.++||+|+. +| |+++.++++.+.+....... ..++... ...+.++.+
T Consensus 188 ~~~~~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~~~~~~~----------~~~~~~~------~~~~~a~~~ 244 (349)
T cd06454 188 GLTDDVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLRSYARGF----------IFSTSLP------PAVAAAALA 244 (349)
T ss_pred cccccCcEEEeechhhhcc------cC-CEEECCHHHHHHHHHhchhh----------hccCCCC------HHHHHHHHH
Confidence 1345789999999999853 33 67777766544331110000 0001111 111222334
Q ss_pred HHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 001579 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1050)
Q Consensus 859 ~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~ 937 (1050)
.+..+-. +.+..++...+++++.+.|++. +++. ++.+... +.+-+. .+.+.+++.++|.++||.+...
T Consensus 245 ~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~--~~~~~~~--~~~~~~-----~~~~~~~~~~~L~~~gI~~~~~ 313 (349)
T cd06454 245 ALEVLQG--GPERRERLQENVRYLRRGLKELGFPVG--GSPSHII--PPLIGD-----DPAKAVAFSDALLERGIYVQAI 313 (349)
T ss_pred HHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccc--CCCCCcE--EEEeCC-----ChHHHHHHHHHHHhCCceEEEe
Confidence 4444422 3445566778889999999875 3332 1111111 112111 1235688999999999987543
Q ss_pred CCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 938 SWP----VPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 938 ~~p----v~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
.++ ..+.+|++++..++++|+++++++|+++
T Consensus 314 ~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 314 RYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred cCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 332 1468999999889999999999999864
No 144
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.75 E-value=3.4e-16 Score=180.28 Aligned_cols=270 Identities=12% Similarity=0.135 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHhhCCCeee-eccCchHHHHHHHHHHHHHHHHhcCCC-CCCEEEEcCCCCCccHHH---HHhCCCEEE
Q 001579 631 QEMFNNLGEWLCTITGFDSFS-LQPNAGAAGEYAGLMVIRAYHKARGDH-HRNVCIIPVSAHGTNPAT---AAMCGMKIV 705 (1050)
Q Consensus 631 ~~~i~el~~~lael~G~d~~~-l~~~sGa~ge~a~Llair~y~~~~G~~-~r~~Vlip~saHgt~pa~---a~~~G~~vv 705 (1050)
.+.++++++++++++|.+... +..++++++...++.++.. .+.. +++.|+++...|+++... ++..|++++
T Consensus 41 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~----~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~ 116 (353)
T TIGR03235 41 KKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLAR----AGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVT 116 (353)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHH----hcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEE
Confidence 466889999999999997533 3444555565444444332 1211 236788888888776554 345799999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccC
Q 001579 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA 784 (1050)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~Ga 784 (1050)
.++.++++.+|+++|+++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++..+...+ ...++++
T Consensus 117 ~v~~~~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~tG~~~-~~~~I~~l~~~~~~~~ivD~a~~~g~~~~-~~~~~~~ 191 (353)
T TIGR03235 117 YLPVDESGRIDVDELADAIR---PDTLLVSIMHVNNETGSIQ-PIREIAEVLEAHEAFFHVDAAQVVGKITV-DLSADRI 191 (353)
T ss_pred EEccCCCCcCCHHHHHHhCC---CCCEEEEEEcccCCceecc-CHHHHHHHHHHcCCEEEEEchhhcCCccc-cccccCC
Confidence 99998889999999999996 678999999984 689998 79999999999999999999875443322 2235789
Q ss_pred cEEEeCCccccccCCCCCCCcceeeeecccccCC--CCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHH
Q 001579 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF--LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~--lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1050)
|++++++||+++ .||+|+++++++.... +.....+... ..+.+.++.++.. ...+ .+.+..
T Consensus 192 D~~~~s~~K~~g------p~g~g~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~gt~~~~~-----~~al---~~al~~ 254 (353)
T TIGR03235 192 DLISCSGHKIYG------PKGIGALVIRKRGKPKAPLKPIMFGGGQ---ERGLRPGTLPVHL-----IVGM---GEAAEI 254 (353)
T ss_pred CEEEeehhhcCC------CCceEEEEEccCcccccccCceeeCCCC---cCccccCCCChHH-----HHHH---HHHHHH
Confidence 999999999752 2478999999864322 2211111100 0011122233221 1112 222333
Q ss_pred HChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 001579 863 MGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1050)
Q Consensus 863 lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~ 935 (1050)
+ .+|+++..++...+++++.++|++. +++. ..+.......+.|.++ +++.+++.++|.+ ||.+.
T Consensus 255 ~-~~~~~~~~~~~~~l~~~l~~~l~~~g~~~~-~~~~~~~~~i~~~~~~------~~~~~~v~~~L~~-~i~v~ 319 (353)
T TIGR03235 255 A-RRNAQAWEVKLRAMRNQLRDALQTLGVKLN-GDPAETIPHILNFSID------GVNSEALIVNLRA-DAAVS 319 (353)
T ss_pred H-HhhHHHHHHHHHHHHHHHHHHhccCCeEEe-CCcccccCCEEEEEeC------CcCHHHHHHHHhC-CeEEE
Confidence 3 2577777788888999999999873 3332 1111122222333332 5678899999976 76653
No 145
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.75 E-value=1.5e-16 Score=182.18 Aligned_cols=262 Identities=16% Similarity=0.141 Sum_probs=184.6
Q ss_pred hhhHHHHHHHHHHHHHHhcCCC--CcceeEecchHHHHHHHHHHhhhh-----------cCCCCEEEEcCCCChhHHHHH
Q 001579 206 AQGRLESLLNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNIQ-----------KGKKKTFIIASNCHPQTIDIC 272 (1050)
Q Consensus 206 sqG~le~l~e~q~~ia~L~G~~--~anasl~d~~Taa~eA~~la~~~~-----------~~~gd~Vlvs~~~Hps~~~~~ 272 (1050)
+.+..+...++.+++++++|.+ ..++.++.|||.+...++.+.+.. .+.++.|+++...|+++...+
T Consensus 33 ~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~ 112 (345)
T cd06450 33 SPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAA 112 (345)
T ss_pred CchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHH
Confidence 4556666777889999999986 457888899997766555443211 012347889999999988876
Q ss_pred HHhccCCCeEEEEcCc--------hhhhc-cCC------CeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCc
Q 001579 273 ITRADGFDIKVVVSDL--------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLL 336 (1050)
Q Consensus 273 ~~~a~~~gi~v~~~~~--------~~l~~-l~~------~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~ 336 (1050)
+. .|.+++.++. +++++ +.+ ++++|++++| |.+|.+.|+++|+++||++|+++++++ .+
T Consensus 113 ~~----~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~-a~ 187 (345)
T cd06450 113 AY----LDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDA-AY 187 (345)
T ss_pred HH----HhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEec-hh
Confidence 53 2566666543 44555 544 6788888887 679999999999999999999999943 33
Q ss_pred cccCCC-CC------CcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEeccccc
Q 001579 337 ALTILK-PP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE 408 (1050)
Q Consensus 337 alg~l~-~p------g~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtre 408 (1050)
+.+.+. .. ...++|+++.++ |+++.|++ .|+++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g-----~g~~~~~-------------------------------- 230 (345)
T cd06450 188 GGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLG-----CSAVLVR-------------------------------- 230 (345)
T ss_pred hHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcc-----hHHHHHH--------------------------------
Confidence 433321 11 113799999888 66665543 3444322
Q ss_pred ccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecC-----
Q 001579 409 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA----- 483 (1050)
Q Consensus 409 q~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~----- 483 (1050)
.++..++ +.+++.+|++++.++..++++++.+.|+++++++++.++....+.|..+
T Consensus 231 -----------------~~~~~~~--l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~~~~~~ 291 (345)
T cd06450 231 -----------------ALKLWAT--LRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKL 291 (345)
T ss_pred -----------------HHHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEECCcchh
Confidence 1122222 3677889999999999999999999999985588875444445566543
Q ss_pred C--HHHHHHHHHHcCce-eeee---cCCeEEEEeccC-CCHHHHHHHHHHHh
Q 001579 484 D--AHAIASAAYKIEMN-LRVV---DSNTVTASFDET-TTLEDVDKLFIVFA 528 (1050)
Q Consensus 484 ~--~~~i~~~L~~~GI~-~~~~---~~~~lris~~e~-~t~edId~lv~~l~ 528 (1050)
+ ..++.++|.++|+. +... .++.+|++++.. +|++|||+|+++|.
T Consensus 292 ~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~ 343 (345)
T cd06450 292 DELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIE 343 (345)
T ss_pred hHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 2 56899999998654 4322 246899999987 59999999999986
No 146
>PLN02721 threonine aldolase
Probab=99.74 E-value=1.7e-16 Score=182.19 Aligned_cols=292 Identities=14% Similarity=0.130 Sum_probs=185.0
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH---HHHhCCCEEEEEcCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTD 710 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa---~a~~~G~~vv~V~~d 710 (1050)
..++++.+++++|.+.. +..++|+++.+.++.++. . .++++|++++..|-.... .+...|++++.++.+
T Consensus 42 ~~~l~~~la~~~~~~~~-~~~~~Gs~a~~~~l~~~~----~---~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 113 (353)
T PLN02721 42 ALRLEEEMAKIFGKEAA-LFVPSGTMGNLISVLVHC----D---VRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN 113 (353)
T ss_pred HHHHHHHHHHHhCCcee-EEecCccHHHHHHHHHHc----c---CCCCeEEEcCccceehhcccchhhhcCceeEecCCC
Confidence 56889999999998864 444567665543333221 1 145789999887743333 467789999999988
Q ss_pred CCCCCCHHHHHHHHHcCC----CCEEEEEEEcC-C-Cccccc--cCHHHHHHHHHHcCCEEEEeccccccc---cccCCC
Q 001579 711 AKGNINIEELRKAAEANR----DNLSTLMVTYP-S-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ---VGLTSP 779 (1050)
Q Consensus 711 ~~g~iD~e~L~~~i~~~~----~~taaV~vt~P-n-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al---~gl~~p 779 (1050)
+++.+|+++|+++++++. +++++|+++++ | ++|.+. +++++|.++|+++|+++++|+++.... .+. .+
T Consensus 114 ~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~ 192 (353)
T PLN02721 114 EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PV 192 (353)
T ss_pred cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CH
Confidence 889999999999997421 47899999775 3 467664 248999999999999999999863211 111 22
Q ss_pred C--cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHH
Q 001579 780 G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1050)
Q Consensus 780 g--~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1050)
. ..++|.++.++||+|+ ||..++++.++++...+.. . .. ...+... +.+.. +..++
T Consensus 193 ~~~~~~~d~~~~s~sK~l~------~~~G~~~~~~~~~~~~~~~-~-~~----------~~~~~~~--~~~~~--~~~~~ 250 (353)
T PLN02721 193 HRLVKAADSVSVCLSKGLG------APVGSVIVGSKSFIRKAKR-L-RK----------TLGGGMR--QVGVL--AAAAL 250 (353)
T ss_pred HHHhhhCCEEEEecccccC------CceeeEEecCHHHHHhHHH-H-HH----------hcCCCee--hhHHH--HHHHH
Confidence 2 2378998999999985 3433445556655443210 0 00 0000111 11111 11122
Q ss_pred HHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCe--eecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 001579 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1050)
Q Consensus 858 a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v--~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~ 935 (1050)
..+.. -+.+ .++...+++++.+.|+++..+ .... +..+-+.++++. ..+.+.++++++|.++||.+.
T Consensus 251 ~~l~~----~~~~-~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~L~~~gi~v~ 319 (353)
T PLN02721 251 VALQE----NVPK-LEDDHKKAKLLAEGLNQIKGLRVNVAA---VETNIVYFDITD---GSRITAEKLCKSLEEHGVLLM 319 (353)
T ss_pred HHHHH----HHHH-HHHHHHHHHHHHHHHHhCCCcEEecCC---ccceEEEEEccC---CccccHHHHHHHHHhCCcEEe
Confidence 22211 1222 233356778999999875222 1211 122224455531 012467899999999999976
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 936 ~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
... .+.+|++++...+++|+++++++|++++.
T Consensus 320 ~~~---~~~lR~~~~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 320 PGN---SSRIRVVTHHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred cCC---CceEEEEecCcCCHHHHHHHHHHHHHHhh
Confidence 443 47899999888999999999999988754
No 147
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.74 E-value=4.7e-17 Score=187.36 Aligned_cols=266 Identities=18% Similarity=0.201 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--
Q 001579 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1050)
Q Consensus 211 e~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 288 (1050)
..|.|.|+.+|+++|++.+.. +++|+|.++.+|+++.. . +||+|++++++|.|+...+.. .|++++++++
T Consensus 66 G~I~eAe~~aA~~fGAd~t~f-lvnGsT~g~~a~i~a~~-~--~gd~VLv~RN~HkSv~~alil----~ga~Pvyi~p~~ 137 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADKTFF-LVNGSTSGNQAMIMALC-R--PGDKVLVDRNCHKSVYNALIL----SGAIPVYIPPED 137 (417)
T ss_dssp THHHHHHHHHHHHHTESEEEE-ESSHHHHHHHHHHHHHT-T--TTCEEEEETT--HHHHHHHHH----HTEEEEEEEEEE
T ss_pred cHHHHHHHHHHHhcCCCeEEE-EecCchHHHHHHHHHhc-C--CCCEEEEcCCcHHHHHHHHHH----cCCeEEEecCCc
Confidence 468899999999999998655 77899999999998863 3 899999999999999998643 3777777754
Q ss_pred ----------------hhhhc-c--CCCeeE---EEEEcCCCCeeEccHHHHHHHHHhCCcEEEEE----ecCccccCCC
Q 001579 289 ----------------KDIDY-K--SGDVCG---VLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLALTILK 342 (1050)
Q Consensus 289 ----------------~~l~~-l--~~~t~~---V~v~~pn~~G~i~di~~I~~~ah~~galliV~----a~~~alg~l~ 342 (1050)
+++++ + .++.++ |++++|||+|.+.|+++|+++||++|.+++|+ +++....+..
T Consensus 138 ~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~ 217 (417)
T PF01276_consen 138 NEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPR 217 (417)
T ss_dssp -TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGT
T ss_pred cccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCcc
Confidence 23333 2 345555 99999999999999999999999999999993 3332223334
Q ss_pred CCCcccce-------EEEecC-ccccccCCCCCcceEEEEEehhh-hhcCCCcEEeEeecCCCCcceEEecccccccccc
Q 001579 343 PPGELGAD-------IVVGSA-QRFGVPMGYGGPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 413 (1050)
Q Consensus 343 ~pg~~GaD-------ivvgs~-k~~g~P~~~GGP~~G~la~~~~~-~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irR 413 (1050)
+.-.+||| +++.|. |.++.-. ++++++++... +.. -|.
T Consensus 218 ~a~~~gad~~~~~~~~vvqS~HKtL~alt-----Qts~lh~~~~~~v~~----------------------------~~~ 264 (417)
T PF01276_consen 218 SALALGADRPNDPGIIVVQSTHKTLPALT-----QTSMLHVKGDRIVDH----------------------------ERV 264 (417)
T ss_dssp TCSSTTSS-CTSBEEEEEEEHHHHSSS-T-----T-EEEEEETCCCTTH----------------------------HHH
T ss_pred chhhccCccccccceeeeechhhcccccc-----cceEEEecCCCcccH----------------------------HHH
Confidence 45679999 999999 6665432 57899988653 110 000
Q ss_pred cccCCCccchhHHHHHHHHHH--HHHh-CcccHHHHHHHHHHHHHHHHHHH---hcCCCEEEcCC------C--------
Q 001579 414 DKATSNICTAQALLANMAAMY--AVYH-GPEGLKTIAQRVHGLAGTFALGL---KKLGTVEVQGL------P-------- 473 (1050)
Q Consensus 414 ekaTsnict~~~l~a~~aa~y--~~~~-g~~Gl~~ia~~~~~~a~~l~~~L---~~~G~~~l~~~------~-------- 473 (1050)
.++-+-.-|+++.+.+||++- ..++ +.+| +++.++..+++..++++| +++.+|+++++ .
T Consensus 265 ~~~l~~~~TTSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 343 (417)
T PF01276_consen 265 NEALSMHQTTSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGE 343 (417)
T ss_dssp HHHHHHHS-SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccc
Confidence 111112225588889999983 2355 3444 567788888999999999 55533777632 1
Q ss_pred -------------Ccc--EEEEecC-----------C--HHHHHHHHHHcCceeeeecCCeEEEEeccCCCHH
Q 001579 474 -------------FFD--TVKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLE 518 (1050)
Q Consensus 474 -------------~~~--~v~i~~~-----------~--~~~i~~~L~~~GI~~~~~~~~~lris~~e~~t~e 518 (1050)
.+| .++|.++ + +..+.+.|+++||.++..+...+.+-++..+|++
T Consensus 344 ~whgf~~~~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 344 NWHGFEGLADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTKE 416 (417)
T ss_dssp TTT--TT--TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-HH
T ss_pred cchhchhcccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCCC
Confidence 123 2666652 2 6788999999999999988899999999888875
No 148
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.74 E-value=2.7e-16 Score=184.94 Aligned_cols=294 Identities=18% Similarity=0.204 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcC
Q 001579 630 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT 709 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~ 709 (1050)
+.+...++++.+++++|.+. .+..++|++++.+++.++. + ..++++|+++...|++....+.+.|.+++.++.
T Consensus 89 ~~~~~~~Le~~la~~~g~~~-~i~~~sG~~a~~~~i~~l~-----~-~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~ 161 (410)
T PRK13392 89 TSHPHVLLERELADLHGKES-ALLFTSGYVSNDAALSTLG-----K-LLPGCVILSDALNHASMIEGIRRSGAEKQVFRH 161 (410)
T ss_pred ChHHHHHHHHHHHHHhCCCC-EEEECcHHHHHHHHHHHHh-----c-CCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC
Confidence 33446689999999999764 4666788876654444321 1 013467777777888776667888999877754
Q ss_pred CCCCCCCHHHHHHHHHcCC-CCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccC------CCCc
Q 001579 710 DAKGNINIEELRKAAEANR-DNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT------SPGY 781 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~-~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~------~pg~ 781 (1050)
.|.+++++.+++.. +++++|++++|+ .+|.+. ++++|.++|+++|+++++|+++..+..+-. .++.
T Consensus 162 -----~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~ 235 (410)
T PRK13392 162 -----NDLADLEEQLASVDPDRPKLIAFESVYSMDGDIA-PIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGL 235 (410)
T ss_pred -----CCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccC
Confidence 26777877776442 578999999994 689887 799999999999999999999763331110 0111
Q ss_pred -ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHH
Q 001579 782 -IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1050)
Q Consensus 782 -~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1050)
...|+++.+++|+|++ +| |++++++++.+.+.... ... ..+.+. ++..+.++.+.+
T Consensus 236 ~~~~div~~tlsK~~g~------~G-G~~~~~~~~~~~l~~~~-----------~~~-~~s~~~----~~~~~~a~~aaL 292 (410)
T PRK13392 236 MDRIDMIQGTLAKAFGC------LG-GYIAASADLIDFVRSFA-----------PGF-IFTTAL----PPAVAAGATAAI 292 (410)
T ss_pred CCCCcEEEEEChHhhhc------cc-chhhcCHHHHHHHHHhC-----------cch-hccCcC----CHHHHHHHHHHH
Confidence 1468888899999964 33 67777766554321100 000 001111 112223334445
Q ss_pred HHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCCcccCCCC
Q 001579 861 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPTMS 938 (1050)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~Gi~~~~~~ 938 (1050)
..+...+ +..++...+++++.++|++. +++. ++ .+.+ +.+.+. .+....+++++|. ++||.+....
T Consensus 293 ~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~-~~-~~~~---~~i~~~-----~~~~~~~~~~~L~~~~GI~v~~~~ 360 (410)
T PRK13392 293 RHLKTSQ--TERDAHQDRVAALKAKLNANGIPVM-PS-PSHI---VPVMVG-----DPTLCKAISDRLMSEHGIYIQPIN 360 (410)
T ss_pred HHHhcCH--HHHHHHHHHHHHHHHHHHHcCCCCC-CC-CCCE---EEEEeC-----CHHHHHHHHHHHHHhCCEEEeeeC
Confidence 4443332 23355667889999999875 4432 21 1222 223322 0123568999986 6899986554
Q ss_pred CC-C---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 939 WP-V---PGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 939 ~p-v---~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
+| + ...+||+++..+|++|+|+++++|.++.++
T Consensus 361 ~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 361 YPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred CCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 44 2 258999999999999999999999988654
No 149
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.74 E-value=6.9e-17 Score=184.38 Aligned_cols=288 Identities=16% Similarity=0.141 Sum_probs=181.9
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH---HHHhCCCEEEEEcC
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGT 709 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa---~a~~~G~~vv~V~~ 709 (1050)
...++++.+++++| +...+..++|+++.. ++++.+. .++++|+++...|.+... .+.+.|++++.++.
T Consensus 33 ~~~~l~~~~a~~~g-~~~~~~~~~gt~a~~---~~~~~l~-----~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 103 (338)
T cd06502 33 TTAKLEARAAELFG-KEAALFVPSGTAANQ---LALAAHT-----QPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPG 103 (338)
T ss_pred HHHHHHHHHHHHhC-CCeEEEecCchHHHH---HHHHHhc-----CCCCeEEEecCcceeeecCCcHHHHcCceEEeecC
Confidence 35678899999999 444455566766553 3334321 245789999888865432 35568999999998
Q ss_pred CCCCCCCHHHHHHHHHcC----CCCEEEEEEEcCCCcccc-c-cCHHHHHHHHHHcCCEEEEeccccccc-cccC-CCC-
Q 001579 710 DAKGNINIEELRKAAEAN----RDNLSTLMVTYPSTHGVY-E-EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT-SPG- 780 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~----~~~taaV~vt~Pn~~Gv~-~-~di~eI~~la~~~G~~v~vD~A~~~al-~gl~-~pg- 780 (1050)
+. +.+|+++|+++++++ .+++++|++++|+..|.+ . .++++|+++|+++|+++++|+|+.... .... ...
T Consensus 104 ~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~ 182 (338)
T cd06502 104 EN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKT 182 (338)
T ss_pred CC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHH
Confidence 54 789999999999742 137899999999755643 2 368999999999999999999863211 1111 111
Q ss_pred -cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHH
Q 001579 781 -YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1050)
Q Consensus 781 -~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1050)
..++|+++.++||+|+.| |.++++.++++.+.+...... ..++... ++.. +++.
T Consensus 183 ~~~~~d~~~~s~sK~~~~~------~g~~~~~~~~~~~~~~~~~~~------------~~~~~~~----~~~~---~~a~ 237 (338)
T cd06502 183 YKSGVDSVSFCLSKGGGAP------VGAVVVGNRDFIARARRRRKQ------------AGGGMRQ----SGFL---AAAG 237 (338)
T ss_pred HHhcCCEEEEeccccCCCc------cceEEECCHHHHHHHHHHHHH------------hCCChhh----HHHH---HHHH
Confidence 247899999999999654 334566666655443210000 0001110 1111 2223
Q ss_pred HHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH---HCCcccC
Q 001579 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM---DYGFHGP 935 (1050)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~---d~Gi~~~ 935 (1050)
+..+...++.+..++...+++++.+.|+++ +.+ ++ +..+-+.+..+. ......++.++|. ++|+.+.
T Consensus 238 ~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~----~~~~~~~v~~~~----~~~~~~~l~~~l~~~~~~gi~~~ 308 (338)
T cd06502 238 LAALENDLWLRRLRHDHEMARRLAEALEELGGLE-SE----VQTNIVLLDPVE----ANAVFVELSKEAIERRGEGVLFY 308 (338)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCCc-cc----ccCCeEEEecCC----ccHHHHHHHHHHHHhhhCCEEEE
Confidence 334444456666677888899999999875 322 21 122223444321 1111234455554 6788765
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001579 936 TMSWPVPGTLMIEPTESESKEELDRYCDALIS 967 (1050)
Q Consensus 936 ~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~ 967 (1050)
... .+.+||+++..++.+|++++++++++
T Consensus 309 ~~~---~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 309 AWG---EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ecC---CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 332 27899999999999999999999864
No 150
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.74 E-value=3.4e-16 Score=183.89 Aligned_cols=296 Identities=17% Similarity=0.199 Sum_probs=191.0
Q ss_pred cHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEc
Q 001579 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~ 708 (1050)
|..+...++++.+++++|.+.+ +..++|++++.+++.++. +. .++++|+.....|++....+...|.+++.++
T Consensus 87 ~~~~~~~~le~~la~~~g~~~~-~~~~SG~~An~~ai~~l~-----~~-~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~ 159 (406)
T PRK13393 87 GTNHYHVLLEAELADLHGKEAA-LLFTSGYVSNWAALSTLG-----SR-LPGCVILSDELNHASMIEGIRHSRAEKRIFR 159 (406)
T ss_pred CChHHHHHHHHHHHHHhCCCcE-EEeCCcHHHHHHHHHHhh-----cC-CCCCEEEEccchhHHHHHHHHHcCCeEEEeC
Confidence 3344567899999999998654 566788776655544321 11 1346777777889877766777888888777
Q ss_pred CCCCCCCCHHHHHHHHHcCC-CCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccc-cC-----CCC
Q 001579 709 TDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG-LT-----SPG 780 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~-~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~g-l~-----~pg 780 (1050)
. .|++++++++++.. +++++|+++.+ |..|.+. |+++|+++|+++|+++++|+++..++.| .. .++
T Consensus 160 ~-----~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~-~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~ 233 (406)
T PRK13393 160 H-----NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIA-PIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREG 233 (406)
T ss_pred C-----CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchh-CHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcC
Confidence 5 48889988886542 36788888888 4689997 7999999999999999999997644321 11 111
Q ss_pred c-ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHH
Q 001579 781 Y-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1050)
Q Consensus 781 ~-~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1050)
. ...|++..++.|.|+. +| |+++.++++...+.... +... ...+ +++..++++.+.
T Consensus 234 ~~~~~~i~~~tlsKa~g~------~G-G~~~~~~~~~~~l~~~~-----------~~~~-~t~~----~~p~~~aa~~aa 290 (406)
T PRK13393 234 LADRLTIIEGTLAKAFGV------MG-GYITGSAALCDFIRSFA-----------SGFI-FTTS----LPPAVAAGALAS 290 (406)
T ss_pred CCCCCeEEEEeCchhhcc------cC-ceeeCCHHHHHHHHHhC-----------cCce-ecCc----cCHHHHHHHHHH
Confidence 1 1258887788898853 22 67776666554432100 0000 0001 122223334455
Q ss_pred HHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHH-CCcccCCC
Q 001579 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-YGFHGPTM 937 (1050)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d-~Gi~~~~~ 937 (1050)
+..+...+.. .++...+++++.++|++. +++. ++ .+++ +.+.+.. .....++.++|.+ +||.+...
T Consensus 291 L~~~~~~~~~--~~~~~~~~~~l~~~L~~~g~~~~-~~-~~~i---~~v~~~~-----~~~~~~l~~~L~~~~Gi~v~~~ 358 (406)
T PRK13393 291 VRHLKASSAE--RERHQDRVARLRARLDKAGIPHL-PN-PSHI---VPVMVGD-----PVLCKQISDELLDRYGIYVQPI 358 (406)
T ss_pred HHHHhhCHHH--HHHHHHHHHHHHHHHHHcCCCcC-CC-CCCe---EEEEeCC-----HHHHHHHHHHHHHhCCEEEEeE
Confidence 5555433322 234457788999999875 4432 22 2322 1222210 1235789999987 59998655
Q ss_pred CCC-C---CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 938 SWP-V---PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 938 ~~p-v---~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
.+| + .+.+||+|+..+|++|+|+++++|.+++.+.
T Consensus 359 ~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 359 NYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred CCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 444 2 2579999999999999999999999987764
No 151
>PRK15029 arginine decarboxylase; Provisional
Probab=99.74 E-value=1.5e-16 Score=195.14 Aligned_cols=278 Identities=13% Similarity=0.059 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--
Q 001579 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1050)
Q Consensus 211 e~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 288 (1050)
..|.++|+..|+++|.+.+.. +++|+|.++.||+++.. ++||+|+|+++||.|+...+.. .|.+.+++++
T Consensus 205 G~I~eAq~~aA~~fgA~~t~F-lvNGST~gn~a~i~a~~---~~gd~Vlv~RN~HKSv~~al~L----~ga~Pvyl~P~~ 276 (755)
T PRK15029 205 GAFGESEKYAARVFGADRSWS-VVVGTSGSNRTIMQACM---TDNDVVVVDRNCHKSIEQGLIL----TGAKPVYMVPSR 276 (755)
T ss_pred cHHHHHHHHHHHHhCCCcEEE-EeCChhHHHHHHHHHhc---CCCCEEEeecccHHHHHHHHHH----cCCeEEEecccc
Confidence 478899999999999998655 77899999999888753 2899999999999999998642 4677777643
Q ss_pred ----------------hhhhc-c--CCCee--------EEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEE----ecCcc
Q 001579 289 ----------------KDIDY-K--SGDVC--------GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLA 337 (1050)
Q Consensus 289 ----------------~~l~~-l--~~~t~--------~V~v~~pn~~G~i~di~~I~~~ah~~galliV~----a~~~a 337 (1050)
+++++ + .++++ +|++++|||+|.+.|+++|+++||++|++++|+ +++..
T Consensus 277 ~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F 356 (755)
T PRK15029 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccccc
Confidence 23433 2 23445 899999999999999999999999999999993 33221
Q ss_pred ccCCC--CCC-----c-ccce-EEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccc
Q 001579 338 LTILK--PPG-----E-LGAD-IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTR 407 (1050)
Q Consensus 338 lg~l~--~pg-----~-~GaD-ivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtr 407 (1050)
...++ .+- . .||| +++.|. |.++. +. ++++++++.. .+.+. .
T Consensus 357 ~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lT----QaS~LHv~~~-~~~id---------~------------- 408 (755)
T PRK15029 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LS----QASYIHVREG-RGAIN---------F------------- 408 (755)
T ss_pred CccccccccccccccccCCCceEEEEchhhcccc-hh----hhhhheeCCC-ccccC---------H-------------
Confidence 22222 111 3 7999 899999 66654 22 4578877543 11111 0
Q ss_pred cccccccccCCCccchhHHHHHHHHHH-HH-HhCc-ccHHHHHHHHHHHHHHHHHHHhcCCC------------------
Q 001579 408 EQHIRRDKATSNICTAQALLANMAAMY-AV-YHGP-EGLKTIAQRVHGLAGTFALGLKKLGT------------------ 466 (1050)
Q Consensus 408 eq~irRekaTsnict~~~l~a~~aa~y-~~-~~g~-~Gl~~ia~~~~~~a~~l~~~L~~~G~------------------ 466 (1050)
-|...+-.-..|+++.|.+||++- +. ++-. .| +++.++..+.+..++++|.++.+
T Consensus 409 ---~r~~~~l~~~qSTSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v 484 (755)
T PRK15029 409 ---SRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVV 484 (755)
T ss_pred ---HHHHHHHHHHcCCCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccccccccccccccccCcccc
Confidence 011111122346688999999983 22 3322 34 45667778888889999877643
Q ss_pred ------------------------EEEcCC--C------------CccE--EEEecCC----HH---------HHHHHHH
Q 001579 467 ------------------------VEVQGL--P------------FFDT--VKVKCAD----AH---------AIASAAY 493 (1050)
Q Consensus 467 ------------------------~~l~~~--~------------~~~~--v~i~~~~----~~---------~i~~~L~ 493 (1050)
+.++++ . .+|+ ++|.+++ +. .+.+.|.
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~ 564 (755)
T PRK15029 485 TDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLG 564 (755)
T ss_pred ccccccccccccccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHH
Confidence 222211 0 1243 5555532 33 8999998
Q ss_pred HcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 494 KIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 494 ~~GI~~~~~~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
++||.++..+...+.+-++..+|++++++|+++|.
T Consensus 565 ~~gI~~E~~~~~~vL~l~s~g~t~~~~~~L~~aL~ 599 (755)
T PRK15029 565 RHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLC 599 (755)
T ss_pred HcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 89999999888999999999999999999999996
No 152
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.74 E-value=4.8e-16 Score=182.88 Aligned_cols=282 Identities=13% Similarity=0.112 Sum_probs=177.4
Q ss_pred HHhhhHHHHHHHHHH----HHHHhcCCCCccee-EecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhH-HHHHHH-hc
Q 001579 204 EIAQGRLESLLNFQT----MIADLTGLPMSNAS-LLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQT-IDICIT-RA 276 (1050)
Q Consensus 204 eisqG~le~l~e~q~----~ia~L~G~~~anas-l~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~-~~~~~~-~a 276 (1050)
+...| .+.+.++++ .+++++|.+. +. .+.+||+|..+++.++ .. +||+|++++..|.+. ...++- ..
T Consensus 64 r~~~G-~~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A~~~~l~al-~~--~GD~Vl~~~~~~~~~~~~g~~~~~~ 137 (416)
T PRK13034 64 RYYGG-CEFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQANGAVYLAL-LK--PGDTILGMSLSHGGHLTHGAKVSLS 137 (416)
T ss_pred cccCC-ChHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHHHHHHHHHh-cC--CCCEEEEcCccceeeeecCCcceec
Confidence 44445 366777777 9999999886 43 3578999999888776 33 899999999999873 222211 00
Q ss_pred ------cCCCeEEE--EcCchhhhc-cC-CCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCC--
Q 001579 277 ------DGFDIKVV--VSDLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP-- 344 (1050)
Q Consensus 277 ------~~~gi~v~--~~~~~~l~~-l~-~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p-- 344 (1050)
..++++.. .+|++++++ +. .++++|++..+ .+|...|+++|.++||++|++++|+ +.+++|+...+
T Consensus 138 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~-~~g~~~dl~~l~~la~~~g~~livD-~Aha~G~~~~g~~ 215 (416)
T PRK13034 138 GKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFS-AYPRELDFARFREIADEVGALLMVD-MAHIAGLVAAGEH 215 (416)
T ss_pred cceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCC-ccccccCHHHHHHHHHHcCCEEEEe-CcccccCcccCCC
Confidence 01121111 145667766 53 35777776554 4688889999999999999999994 34555544221
Q ss_pred -Cc-ccceEEEecC-ccccccCCCCCcceEEEEEehhhh-hcCCCcEEeEeecCCCCcceEEecccccccccccccCCCc
Q 001579 345 -GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYK-RMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 420 (1050)
Q Consensus 345 -g~-~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~-r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni 420 (1050)
+. .++|++++++ |+|++| .+|+++++++.+ .++... +. . .++ ++++
T Consensus 216 ~~~~~~~Di~~~s~~K~l~g~------~GG~v~~~~~~~~~~~~~~-~~--------~----~~~----------~~~~- 265 (416)
T PRK13034 216 PNPFPHAHVVTTTTHKTLRGP------RGGMILTNDEEIAKKINSA-VF--------P----GLQ----------GGPL- 265 (416)
T ss_pred CCCCCCceEEEEeCcccCCCC------CCeEEEECcHHHHHHHHhh-cC--------C----ccc----------CCcc-
Confidence 21 2599999998 777443 346776665432 222100 00 0 000 0011
Q ss_pred cchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCccE--EEEecCC--HHHHHHHHHHc
Q 001579 421 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDT--VKVKCAD--AHAIASAAYKI 495 (1050)
Q Consensus 421 ct~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~~~~~--v~i~~~~--~~~i~~~L~~~ 495 (1050)
.....+...++ ...+ ..+..++.+++++++++|+++|+++| +++... ...+. +.+...+ ...+.++|.++
T Consensus 266 --~~~~aa~~~al-~~~~-~~~~~~~~~~l~~~a~~l~~~L~~~G-~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~ 340 (416)
T PRK13034 266 --MHVIAAKAVAF-GEAL-QPEFKTYAKQVIANAQALAEVLKERG-YDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERA 340 (416)
T ss_pred --HHHHHHHHHHH-HHHh-ChhHHHHHHHHHHHHHHHHHHHHHcC-CEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhC
Confidence 01122211111 1122 23445778999999999999999997 988642 22223 4444433 56777889999
Q ss_pred Cceeeee----------cCCeEEEEecc----CCCHHHHHHHHHHHh
Q 001579 496 EMNLRVV----------DSNTVTASFDE----TTTLEDVDKLFIVFA 528 (1050)
Q Consensus 496 GI~~~~~----------~~~~lris~~e----~~t~edId~lv~~l~ 528 (1050)
||.+... .+..+|+++++ .+|++||++++++|.
T Consensus 341 GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~ 387 (416)
T PRK13034 341 GITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWIL 387 (416)
T ss_pred CcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHH
Confidence 9988641 23579999999 566999999999996
No 153
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.74 E-value=7.6e-16 Score=182.62 Aligned_cols=337 Identities=14% Similarity=0.139 Sum_probs=217.7
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..+|++..++..++..+. ....+.....+. .+...++.+.|+++++.+ .-.++.+||+++++++++.+|.
T Consensus 66 ~~lGh~~p~v~~Ai~~ql-~~~~~~~~~~~~--------~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~ 136 (453)
T PRK06943 66 NLFGHANPRINAALKDQL-DTLEHAMLAGCT--------HEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFH 136 (453)
T ss_pred hcCCCCCHHHHHHHHHHH-HhcCCccccccC--------CHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHH
Confidence 467888887777766653 221111110111 123457888999998743 2346689999999999998888
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCC-C-----------CCCHHHHHHHHH
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-G-----------NINIEELRKAAE 725 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~-g-----------~iD~e~L~~~i~ 725 (1050)
|...||.++|.+|| ...++||....+..+.|- .+..++.... + .-|++++++.++
T Consensus 137 ~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~ 216 (453)
T PRK06943 137 AWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFA 216 (453)
T ss_pred HHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHH
Confidence 87666755566666 577899987555433221 1334443211 1 124688888888
Q ss_pred cCCCCEEEEEEEc-C-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCc
Q 001579 726 ANRDNLSTLMVTY-P-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLH 792 (1050)
Q Consensus 726 ~~~~~taaV~vt~-P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~h 792 (1050)
++.+++++|+++. . ...|++. +.++++.++|++||+++|+|.+ +.|+.+.|.+ -+|++++ .
T Consensus 217 ~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV----~TG~GRtG~~fa~~~~gv~PDivt~--g 290 (453)
T PRK06943 217 ERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEI----AVGCGRTGTFFACEQAGVWPDFLCL--S 290 (453)
T ss_pred hCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeech----hhCCCCCcchhHHHhCCCCCCeEee--e
Confidence 7778999999986 2 4567654 2599999999999999999976 6778787753 3799887 5
Q ss_pred cccccCCCCCCCcceeeeecccccCCCC-CCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHH
Q 001579 793 KTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 871 (1050)
Q Consensus 793 Ktf~~P~g~GGPg~G~i~v~~~l~~~lp-g~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~ 871 (1050)
|.++ +|--.+|.+++++++.+.+. +...+ . ....+++.|+++.++++.+.|..+-++++-+
T Consensus 291 Kgl~----gG~~Pi~av~~~~ei~~~~~~~~~~~------------~-~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~- 352 (453)
T PRK06943 291 KGIS----GGYLPLSLVLSRDAIFAAFYDDDVTR------------G-FLHSHSYTGNPLACRAALATLDLFAEDDVLA- 352 (453)
T ss_pred hhhc----cCcccceEEEEcHHHHHhhcccCccC------------C-ccCCCCCCCCHHHHHHHHHHHHHHHhcCHHH-
Confidence 8774 33224777788887766542 11000 0 0011234567888888999999987776543
Q ss_pred HHHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEecccccccCCC-CHHHHHHHHHHCCcccCCCCCCCCCEEE
Q 001579 872 SKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1050)
Q Consensus 872 a~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~-~~~~vakrL~d~Gi~~~~~~~pv~~~lr 946 (1050)
+.....++|.++|+++ +..+ ..|. |.. +.+.+.. ...... ....+.+++.++|+.+... .+.++
T Consensus 353 --~~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~---~gvel~~-~~~~~~~~~~~i~~~~~~~Gll~~~~----g~~l~ 421 (453)
T PRK06943 353 --RNARKSARLRAALAPLAAHPQVRHLRQR-GTI---FAFDVAL-DGDAARTFSRRFFEAALERELLLRPI----GTTVY 421 (453)
T ss_pred --HHHHHHHHHHHHHHHHhcCCCEEeEecc-ccE---EEEEEcc-CCCcchHHHHHHHHHHHHCCcEEEec----CCEEE
Confidence 3345678888888765 2221 1221 322 2233320 000011 1356888899999987532 36799
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 947 IEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 947 I~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
++|+..+|++|||+++++|.+++.++
T Consensus 422 ~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 422 LMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred EeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999876
No 154
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.74 E-value=3.8e-16 Score=183.49 Aligned_cols=294 Identities=18% Similarity=0.192 Sum_probs=189.0
Q ss_pred cHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEc
Q 001579 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~ 708 (1050)
|..+...++++.+++++|.+.. +..++|++++.+++.++..+ .+++.|+.....|++....+...|.++..++
T Consensus 88 g~~~~~~~l~~~la~~~g~~~~-~~~~sG~~an~~ai~~l~~~------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~ 160 (407)
T PRK09064 88 GTNHYHVELERELADLHGKEAA-LVFTSGYVSNDATLSTLAKL------IPDCVIFSDELNHASMIEGIRRSRCEKHIFR 160 (407)
T ss_pred cCHHHHHHHHHHHHHHhCCCcE-EEECcHHHHHHHHHHHHhCC------CCCCEEEEeCcchHHHHHHHHHcCCcEEEEC
Confidence 3445677899999999997544 56677877665554443311 1345555554556555555666788876666
Q ss_pred CCCCCCCCHHHHHHHHHcCC-CCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCC------
Q 001579 709 TDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------ 780 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~-~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg------ 780 (1050)
. .|+++|++++++.. +++++|++++| |..|.+. ++++|.++|+++|+++++|+++..+. +.+.|
T Consensus 161 ~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~-~l~~i~~l~~~~~~~livDEa~~~G~--~g~~g~g~~~~ 232 (407)
T PRK09064 161 H-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIA-PIAEICDLADKYNALTYLDEVHAVGM--YGPRGGGIAER 232 (407)
T ss_pred C-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcccc-CHHHHHHHHHHcCCEEEEECCCcccc--cCCCCCChHHh
Confidence 4 48899999987543 57889999998 4689887 79999999999999999999975332 11111
Q ss_pred --c-ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHH
Q 001579 781 --Y-IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1050)
Q Consensus 781 --~-~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1050)
. ...|+++.+++|.|+. +| |++++++++...+.... +... ...+. ++..+.++.
T Consensus 233 ~~~~~~~div~~t~sKa~g~------~G-G~~~~~~~~~~~l~~~~-----------~~~~-~t~~~----~~~~~~aa~ 289 (407)
T PRK09064 233 DGLMDRIDIIEGTLAKAFGV------MG-GYIAGSAALVDAVRSYA-----------PGFI-FTTSL----PPAIAAAAL 289 (407)
T ss_pred cCCCCCCeEEEEecchhhhc------cC-ceEecCHHHHHHHHHhC-----------cccc-ccCcC----CHHHHHHHH
Confidence 1 1358888889999853 22 67777776555431100 0000 00011 122233344
Q ss_pred HHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCCcccC
Q 001579 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGP 935 (1050)
Q Consensus 858 a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~Gi~~~ 935 (1050)
+.+..+...+ ...++...+++++.++|++. +++. ++.+++ +.+.+.. .....+++++|. ++||.+.
T Consensus 290 ~al~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~i---v~i~~~~-----~~~~~~l~~~L~~~~gi~v~ 357 (407)
T PRK09064 290 ASIRHLKESN--EERERHQERAAKLKAALDAAGIPVM--PNESHI---VPVMVGD-----PEKCKKASDMLLEEHGIYVQ 357 (407)
T ss_pred HHHHHHhcCH--HHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHhCCEEEe
Confidence 5555554433 23355667889999999875 5542 111222 2233321 124578999987 4699986
Q ss_pred CCCCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 936 TMSWP-VP---GTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 936 ~~~~p-v~---~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
...+| ++ +.+||+++..+|++|+|+++++|++++.++
T Consensus 358 ~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 358 PINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred eECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 65544 22 579999999999999999999999987653
No 155
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.73 E-value=2.9e-16 Score=182.59 Aligned_cols=309 Identities=13% Similarity=0.072 Sum_probs=191.8
Q ss_pred HHHHHHHHHHHHHhhCCCe---eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH--HHhCCC-EE
Q 001579 631 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AAMCGM-KI 704 (1050)
Q Consensus 631 ~~~i~el~~~lael~G~d~---~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~--a~~~G~-~v 704 (1050)
.+++++.++.+++++|.+. +.+..++|+.|.++++..+ . . .++..+++ ...||.+-.- ++..|+ ++
T Consensus 47 ~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l---~-~---~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v 118 (378)
T PRK03080 47 KALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL---L-G---ARRVDHLA-WESFGSKWATDVVKQLKLEDP 118 (378)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc---C-C---CCcceEEE-eCHHHHHHHHHHHhhcCCCCc
Confidence 4678899999999999842 4455567777776554433 1 1 12344554 4566554332 356799 99
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCccc
Q 001579 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIG 783 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~G 783 (1050)
+.++.+.++.+|+++++. ++.|.+++- +.+|+.. |+++|++ |++|++++||+++..+...+. .. .
T Consensus 119 ~~~~~~~g~~~d~~~i~~--------~~~V~~~h~~t~tG~~~-pi~~I~~--~~~g~~~vVDa~qs~G~~pid-v~--~ 184 (378)
T PRK03080 119 RVLEADYGSLPDLSAVDF--------DRDVVFTWNGTTTGVRV-PVARWIG--ADREGLTICDATSAAFALPLD-WS--K 184 (378)
T ss_pred eEeccCCCCCCCHhhcCC--------CCCEEEEecCCccceec-cchhhcc--ccCCCeEEEecccccccCCCC-HH--H
Confidence 999987777888877331 334666665 5689998 7999999 899999999998754333221 12 3
Q ss_pred CcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCC----CCCC------CCCCCCCCCCCcchhhhHHHH
Q 001579 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG----GIPA------PEKSQPLGTIAAAPWGSALIL 853 (1050)
Q Consensus 784 aDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~----~~~~------~~~~~~t~~i~sa~~g~~~~~ 853 (1050)
+|++++++||||+ |.||+|++++++++.+.+.....++.. +... ...+..+.++.. . ..+
T Consensus 185 iD~~~~s~~K~l~-----~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~----i-~~i 254 (378)
T PRK03080 185 LDVYTFSWQKVLG-----GEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPS----M-LTV 254 (378)
T ss_pred CcEEEEehhhhCC-----CCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCch----H-HHH
Confidence 7999999999995 336899999998776554322211110 0000 001112222221 1 112
Q ss_pred HHHHHHHHHHChh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHC
Q 001579 854 PISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1050)
Q Consensus 854 ~~a~a~l~~lG~e-Gl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~ 930 (1050)
....+.+.++-++ |+..+.++...+++++.+.|+++ +.+....+.......+.|.++.. ..+.+ .++.++|.++
T Consensus 255 ~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~--~~~~~-~~~~~~l~~~ 331 (378)
T PRK03080 255 EDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA--QAAVD-AAAVAKLLRE 331 (378)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc--hHHHH-HHHHHHHHHc
Confidence 2234456666666 78888888889999999999875 23321111111111233443310 00122 3566677777
Q ss_pred CcccCCCCCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 931 GFHGPTMSWP-VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 931 Gi~~~~~~~p-v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
|+.+..-.+. ..+.+||++..+++++|||+|+++|++++++.+.
T Consensus 332 ~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 332 NGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 8775422211 2478999999999999999999999999887654
No 156
>PRK07678 aminotransferase; Validated
Probab=99.73 E-value=7.6e-16 Score=182.74 Aligned_cols=344 Identities=16% Similarity=0.187 Sum_probs=213.8
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
..||+|..++..++..+.. ...+... .+. .+...++.+.|+++++.+.-.++.+||+++++++++.+|.|
T Consensus 59 ~~lGh~~p~v~~ai~~q~~-~~~~~~~-~~~--------~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~ 128 (451)
T PRK07678 59 VNVGYGRKELAEAAYEQLK-TLSYFPL-TQS--------HEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQY 128 (451)
T ss_pred hcCCCCCHHHHHHHHHHHH-hcCcccc-ccC--------CHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHH
Confidence 4578888777766655532 1111110 011 12345788899999876544567899999999999999998
Q ss_pred HHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCCCC---------CC---HHHHHHHHH-
Q 001579 672 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGN---------IN---IEELRKAAE- 725 (1050)
Q Consensus 672 ~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~g~---------iD---~e~L~~~i~- 725 (1050)
...+|..+|++|| +..++||....+....|. .+..++.....+ .| ++.+++.++
T Consensus 129 t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (451)
T PRK07678 129 HAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTW 208 (451)
T ss_pred HHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHh
Confidence 7656654566666 567899987665433221 123343321111 11 234677775
Q ss_pred cCCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc------c--CcEEEeCCcc
Q 001579 726 ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHK 793 (1050)
Q Consensus 726 ~~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~------G--aDv~~~~~hK 793 (1050)
.+.+++++|+++.. ...|++.+ .++++.++|++||+++|+|.+ +.||.+.|.+ | +|++++ .|
T Consensus 209 ~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~~~~~~gv~PDivt~--gK 282 (451)
T PRK07678 209 ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEV----ICGFGRTGKAFGFMNYGVKPDIITM--AK 282 (451)
T ss_pred cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeeh----hhcCCcCchhHHHHhcCCCCCEEEe--ec
Confidence 34578999998854 34576652 499999999999999999976 6677776632 3 799887 58
Q ss_pred ccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHH
Q 001579 794 TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 873 (1050)
Q Consensus 794 tf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~ 873 (1050)
.++ +|+-.+|.+++++++...+..... .... ...+++.|+++.++++.+.|..+-++++.+
T Consensus 283 ~lg----gG~~Pi~av~~~~~i~~~~~~~~~-----------~~~~-~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~--- 343 (451)
T PRK07678 283 GIT----SAYLPLSATAVKKEIYEAFKGKGE-----------YEHF-RHVNTFGGNPAACALALKNLEIMENENLIE--- 343 (451)
T ss_pred ccc----cCCcceeEEEEcHHHHHHHhccCc-----------cccc-ccCCCCCcCHHHHHHHHHHHHHHHhCCHHH---
Confidence 774 443347888888877665431100 0000 011235577888888999999887776543
Q ss_pred HHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccc-cccc-CCCCHHHHHHHHHHCCcccCCCCC--C-CCC
Q 001579 874 IAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LKNT-AGIEPEDVAKRLMDYGFHGPTMSW--P-VPG 943 (1050)
Q Consensus 874 ~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~-~~~~-~g~~~~~vakrL~d~Gi~~~~~~~--p-v~~ 943 (1050)
+..++.++|.++|++. ++++ ..|. |.. ..+.+.-.. .+.. .......+.+.|.++|+.+..... | -.+
T Consensus 344 ~~~~~g~~l~~~l~~~~~~~~~v~~vrg~-Gl~-~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~ 421 (451)
T PRK07678 344 RSAQLGELLLEQLKEELGEHPLVGDIRGK-GLL-VGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNN 421 (451)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEee-ceE-EEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCC
Confidence 4446778888888653 2322 2221 322 112121000 0000 001145788889999998743210 1 136
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 944 TLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 944 ~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
.||++|+..+|++|||+++++|.+++.++
T Consensus 422 ~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 422 VLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999988764
No 157
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.73 E-value=7.3e-16 Score=181.67 Aligned_cols=320 Identities=19% Similarity=0.252 Sum_probs=208.0
Q ss_pred cccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHH
Q 001579 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair 669 (1050)
...+|+|.+.+..++..+.....-+..+ +. .+...++.+.|++++..+ ...++.+||+++++++++.+|
T Consensus 86 ~~~lGh~hp~v~~Av~~ql~~l~~~~~~--~~--------~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr 155 (442)
T TIGR03372 86 IFNVGHRNPNVIAAVENQLAKQPLHSQE--LL--------DPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAK 155 (442)
T ss_pred hhhcCCCCHHHHHHHHHHHHhCCCcccc--cC--------CHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHH
Confidence 3467888888777766653222111111 10 123457888999988643 234678999999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCCCCCCHHHHHHHHHc---CCCCEEE
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGNINIEELRKAAEA---NRDNLST 733 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~g~iD~e~L~~~i~~---~~~~taa 733 (1050)
.|...+| |.+|| ...++||....+....|- .+..+|+ .|.+++++.+++ +++++++
T Consensus 156 ~~t~~~g---r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-----~d~~~~~~~l~~~~~~~~~vAa 227 (442)
T TIGR03372 156 AYQSPRG---KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-----GDIEAMLKALNECKKTGDDVAA 227 (442)
T ss_pred HHHhhcC---CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-----CCHHHHHHHHHHHhcCCCcEEE
Confidence 8854333 34455 567899988666443221 1344444 367888887753 4567899
Q ss_pred EEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCccccccCCCC
Q 001579 734 LMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGG 801 (1050)
Q Consensus 734 V~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~hKtf~~P~g~ 801 (1050)
|+++.- +..|++.+ .++++.++|++||+++++|.+ +.|+.+.|.+ -+|++++ .|.++ +
T Consensus 228 vIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV----~tG~GRtG~~~a~e~~gv~PDivt~--gK~lg----~ 297 (442)
T TIGR03372 228 IILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEV----QTGMGRTGKMFACEHEGVQPDILCL--AKALG----G 297 (442)
T ss_pred EEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeec----ccCCCccccchhhhhcCCCCCeeee--hhhhc----C
Confidence 988753 45677652 299999999999999999987 4566677653 2688875 58763 3
Q ss_pred C-CCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHH
Q 001579 802 G-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNAN 880 (1050)
Q Consensus 802 G-GPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~ 880 (1050)
| -| +|.+++++++...+..... ...+++.|++..++++.+.|..+-++++.+. .....+
T Consensus 298 G~~P-igavv~~~~i~~~~~~~~~----------------~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~---~~~~G~ 357 (442)
T TIGR03372 298 GVMP-IGATIATEAVFSVLFDNPF----------------LHTTTFGGNPLACAAALATINELLEKNLPAQ---AAIKGD 357 (442)
T ss_pred Cccc-ceEEEecHHHHHhhhccCc----------------cccCCCCCCHHHHHHHHHHHHHHHhccHHHH---HHHHHH
Confidence 3 25 5666677776655421100 0112344677778888888988877765543 446788
Q ss_pred HHHHHHhcc---CC-ee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCC
Q 001579 881 YMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESES 954 (1050)
Q Consensus 881 yl~~~L~~~---~~-v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t 954 (1050)
+|.++|+++ ++ .+ ..|. |.. +-+.+.+ ......+.+.|.++|+.+.....+ .+.+||.|+..+|
T Consensus 358 ~l~~~L~~l~~~~~~~i~~vRG~-Gl~---~giel~~-----~~~~~~i~~~l~~~Gvl~~~~~~~-~~~lr~~Ppl~~t 427 (442)
T TIGR03372 358 FLLDGFQQLAAEYPDLIIEARGK-GLL---MAIEFRD-----NEIGYAFAKELFQQNILVAGTLNN-AKSIRIEPPLTIT 427 (442)
T ss_pred HHHHHHHHHHHhCCCceEEEecc-eEE---EEEEeCC-----hHHHHHHHHHHHHCCcEEeecCCC-CCEEEEECCcccC
Confidence 898888774 33 21 2231 222 1233321 113467899999999997543211 4789999999999
Q ss_pred HHHHHHHHHHHHHH
Q 001579 955 KEELDRYCDALISI 968 (1050)
Q Consensus 955 ~eeid~fv~aL~~i 968 (1050)
++|+|+++++|.++
T Consensus 428 ~~~id~~~~~l~~~ 441 (442)
T TIGR03372 428 IEQCALVIKAAKDA 441 (442)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 158
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.73 E-value=5.1e-16 Score=177.89 Aligned_cols=276 Identities=18% Similarity=0.196 Sum_probs=186.3
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEE
Q 001579 206 AQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1050)
Q Consensus 206 sqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1050)
..|......++++.+++++|++. ..++.+||++..+++.+.. ++||+|++++..|+++...++ ..|++++.
T Consensus 41 ~~~~~~~~~~l~~~la~~~~~~~--~iv~~sg~~a~~~~~~~~~---~~gd~Vl~~~~~~~~~~~~~~----~~g~~~~~ 111 (349)
T cd06454 41 ISGTSDLHEELEEELAEFHGKEA--ALVFSSGYAANDGVLSTLA---GKGDLIISDSLNHASIIDGIR----LSGAKKRI 111 (349)
T ss_pred ecCCchHHHHHHHHHHHHhCCCC--EEEeccHHHHHHHHHHHhc---CCCCEEEEehhhhHHHHHHHH----HcCCceEE
Confidence 34555666788899999999874 5567778877776555442 378999999999999887764 34777765
Q ss_pred c---Cchhhhc-cC-----CCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC---------CCCc
Q 001579 286 S---DLKDIDY-KS-----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---------PPGE 346 (1050)
Q Consensus 286 ~---~~~~l~~-l~-----~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~---------~pg~ 346 (1050)
+ +.+++++ +. +++++|++.++ |.+|.+.|+++|+++||++|++++++ +..+.+.+. ....
T Consensus 112 ~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD-~a~~~g~~~~~~~~~~~~~~~~ 190 (349)
T cd06454 112 FKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVD-EAHSVGVYGPHGRGVEEFGGLT 190 (349)
T ss_pred ecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEE-ccccccccCCCCCChhhhcccc
Confidence 5 3455655 32 35677777776 67999999999999999999999994 334444332 1235
Q ss_pred ccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhH
Q 001579 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1050)
Q Consensus 347 ~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~ 425 (1050)
.++|++++|. |.|+. |+ |+++.++++.+.+.... ..+. ..++.| ...
T Consensus 191 ~~~~i~~~s~sK~~~~------~g-G~i~~~~~~~~~~~~~~----------~~~~------------~~~~~~---~~~ 238 (349)
T cd06454 191 DDVDIIMGTLGKAFGA------VG-GYIAGSKELIDYLRSYA----------RGFI------------FSTSLP---PAV 238 (349)
T ss_pred ccCcEEEeechhhhcc------cC-CEEECCHHHHHHHHHhc----------hhhh------------ccCCCC---HHH
Confidence 6899999998 77753 22 67777777665441100 0000 001111 122
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecC--C-HHHHHHHHHHcCceeeee
Q 001579 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--D-AHAIASAAYKIEMNLRVV 502 (1050)
Q Consensus 426 l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~--~-~~~i~~~L~~~GI~~~~~ 502 (1050)
..+..+++ .+.-. .+++.++..++.+++.+.|+++| +.+...+....+.+..+ . +.++.+.|.++||.++..
T Consensus 239 ~~a~~~~l--~~~~~--~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~ 313 (349)
T cd06454 239 AAAALAAL--EVLQG--GPERRERLQENVRYLRRGLKELG-FPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQAI 313 (349)
T ss_pred HHHHHHHH--HHHhc--CHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEEe
Confidence 33334443 23222 46778899999999999999987 77654322112223233 2 788999999999988642
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 503 -------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 503 -------~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
..+.+|++++.++|++|+++++++|+
T Consensus 314 ~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~ 346 (349)
T cd06454 314 RYPTVPRGTARLRISLSAAHTKEDIDRLLEALK 346 (349)
T ss_pred cCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 13689999999999999999999986
No 159
>PRK07482 hypothetical protein; Provisional
Probab=99.73 E-value=1.5e-15 Score=180.57 Aligned_cols=343 Identities=14% Similarity=0.180 Sum_probs=216.9
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llair 669 (1050)
..+|+|.+.+..++..+.-.. .+ ++++.- -..+...++.+.|++++. ++.+ ++.+||+++++++++.+|
T Consensus 62 ~~lGh~~p~v~~Av~~q~~~~-~~--~~~~~~-----~~~~~~~~lAe~L~~~~p~~~~~v-~f~~sGSEAve~AlKlAr 132 (461)
T PRK07482 62 VNVGYGRTEVAEAIAEQAKEL-AY--YHTYVG-----HGTEASITLSKRIIDRAPAGMSKV-YYGLSGSDANETQIKLVW 132 (461)
T ss_pred hcCCCCCHHHHHHHHHHHHhc-Cc--cccccc-----cCCHHHHHHHHHHHHhCCCCcCEE-EEeCchHHHHHHHHHHHH
Confidence 467888888777776663221 11 111100 011345578889999884 4444 668999999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCC------C-------CCCHHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK------G-------NINIEELRKA 723 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~------g-------~iD~e~L~~~ 723 (1050)
.|...+|.++|++|| ...++||....+..+.|. .+..++.... + .-|+++|++.
T Consensus 133 ~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~ 212 (461)
T PRK07482 133 YYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEEL 212 (461)
T ss_pred HHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHH
Confidence 887666655566776 467899976543322221 1233332211 1 1156888888
Q ss_pred HHc-CCCCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeC
Q 001579 724 AEA-NRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 790 (1050)
Q Consensus 724 i~~-~~~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~ 790 (1050)
+++ ..+++++|+++.. ...|++. ..+++|.++|++||+++|+|.+ +.||.+.|.+ -+|++++
T Consensus 213 ~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~- 287 (461)
T PRK07482 213 ILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEV----VTGFGRLGSMFGSDHYGIEPDLITV- 287 (461)
T ss_pred HHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEecc----ccCCCcCcchhhHHhcCCCCCEEEE-
Confidence 853 3467999998754 3457664 2599999999999999999976 6788787754 3699887
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ +|...+|.+++++++.+.+....- . .... ...+++.|+++.++++.+.|..+-++++.+
T Consensus 288 -gKgl~----gG~~Pi~av~~~~~i~~~~~~~~~-~---------~~~~-~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~ 351 (461)
T PRK07482 288 -AKGLT----SAYAPLSGSIVGEKVWDVLEQGSD-E---------HGAI-GHGWTYSGHPICAAAALANLDILERENLVG 351 (461)
T ss_pred -ccccc----cCccccceeeecHHHHHHHhcccc-c---------CCcc-ccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence 58774 333346777778776554421100 0 0000 111235578888899999999988776554
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEecccccc-cCCC-----CHHHHHHHHHHCCcccCCCCC
Q 001579 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN-TAGI-----EPEDVAKRLMDYGFHGPTMSW 939 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~-~~g~-----~~~~vakrL~d~Gi~~~~~~~ 939 (1050)
. .....++|.++|+++ ++++ ..|. |. + +-+.+..-.. .... -...+.+.|.++|+.+...
T Consensus 352 ~---~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Gl-m--~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-- 422 (461)
T PRK07482 352 N---AAEVGAYFRARLRAAFGDHPLVGEVRGV-GM-L--AAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAM-- 422 (461)
T ss_pred H---HHHHHHHHHHHHHHHHhcCCCEEEEeec-ee-E--EEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecC--
Confidence 4 346778888888754 3322 2231 22 2 1222211000 0000 1356888899999986422
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 940 PVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 940 pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
|..+.+++.|+..+|++|||+++++|.++++++.
T Consensus 423 ~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 456 (461)
T PRK07482 423 PHGDILGFAPPLVLTRAEADEIVAIAKDAVDEVL 456 (461)
T ss_pred CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1247899999999999999999999999998763
No 160
>PLN02822 serine palmitoyltransferase
Probab=99.73 E-value=5.6e-16 Score=185.20 Aligned_cols=279 Identities=13% Similarity=0.116 Sum_probs=185.1
Q ss_pred hhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCe
Q 001579 202 QAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDI 281 (1050)
Q Consensus 202 q~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi 281 (1050)
.|+..-|+.+.+.++++.+|+++|.+. ..++.+|.+++.+++.++ . +++|.|+++...|.++...++. .+.
T Consensus 145 g~r~~yg~~~~~~~Lee~La~~~~~~~--~i~~s~G~~a~~sai~a~--~-~~gd~Ii~d~~~H~s~~~~~~l----s~~ 215 (481)
T PLN02822 145 GPRGFYGTIDVHLDCETKIAKFLGTPD--SILYSYGLSTIFSVIPAF--C-KKGDIIVADEGVHWGIQNGLYL----SRS 215 (481)
T ss_pred ccCccccCHHHHHHHHHHHHHHhCCCC--EEEECCHHHHHHHHHHHh--C-CCCCEEEEeCCccHHHHHHHHH----cCC
Confidence 344455778889999999999999764 456666665666655554 2 3789999999999999877643 244
Q ss_pred EEEEcC---chhhhc-c---C------CCe-eEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCC-
Q 001579 282 KVVVSD---LKDIDY-K---S------GDV-CGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPG- 345 (1050)
Q Consensus 282 ~v~~~~---~~~l~~-l---~------~~t-~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg- 345 (1050)
++++++ .++++. + . +++ ++|++..+ +.+|.+.|+++|+++|+++|+++++ ++.++++++...|
T Consensus 216 ~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIv-DEa~s~gvlG~~G~ 294 (481)
T PLN02822 216 TIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLL-DESNSFGVLGKSGR 294 (481)
T ss_pred eEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEE-ECCccccccCCCCC
Confidence 555554 334432 1 1 234 56666554 6699999999999999999999999 5677777765332
Q ss_pred ----cc-----cceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccc
Q 001579 346 ----EL-----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDK 415 (1050)
Q Consensus 346 ----~~-----GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRek 415 (1050)
.+ ..||+++|. |.||. .| ||+++++++++.+. ..
T Consensus 295 G~~e~~~v~~~~~dii~~s~sKalg~---~G----G~i~g~~~ii~~~~-----------------------------~~ 338 (481)
T PLN02822 295 GLSEHFGVPIEKIDIITAAMGHALAT---EG----GFCTGSARVVDHQR-----------------------------LS 338 (481)
T ss_pred ChHHHcCCCCCCCeEEEecchhhhhh---CC----eEEEcCHHHHHHHH-----------------------------hc
Confidence 13 458999986 99863 12 68888887766531 01
Q ss_pred cCCCccch-hHHHHHHHHHH-HHHhCcccHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCC--CCccEEEEecC------C
Q 001579 416 ATSNICTA-QALLANMAAMY-AVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL--PFFDTVKVKCA------D 484 (1050)
Q Consensus 416 aTsnict~-~~l~a~~aa~y-~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~-G~~~l~~~--~~~~~v~i~~~------~ 484 (1050)
+.++++++ .+.+...|++. +..+ +...++.++.+++.++++++|+++ | +.+... .++-.+.+... +
T Consensus 339 ~~~~~fsa~lPp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g-~~~~~~~~spi~~l~l~~~~~~~~~~ 415 (481)
T PLN02822 339 SSGYVFSASLPPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPG-LSIGSNTLSPIVFLHLEKSTGSAKED 415 (481)
T ss_pred CCceeeccccCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCC-cccCCCCCCCEEEEEeCCCcccccch
Confidence 11112221 12222222221 1222 122567888999999999999987 6 777532 22222333211 1
Q ss_pred ---HHHHHHHHH-HcCceeeee---------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 485 ---AHAIASAAY-KIEMNLRVV---------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 485 ---~~~i~~~L~-~~GI~~~~~---------~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
..+++++|. ++||.+... .+..+|++++..+|++||++++++|+.
T Consensus 416 ~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~ 473 (481)
T PLN02822 416 LSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKR 473 (481)
T ss_pred HHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 367888987 789987642 124699999999999999999999963
No 161
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.73 E-value=2.2e-15 Score=174.12 Aligned_cols=278 Identities=17% Similarity=0.161 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--
Q 001579 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1050)
Q Consensus 211 e~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 288 (1050)
..+.++++.+++++|+ .++.+++|+|.++.+++.++ . ++||+|++++..|.+....+ +..|++++.++.
T Consensus 44 ~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~-~--~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~~ 114 (361)
T cd06452 44 PPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSL-C--EKGDWVVVDGLAHYTSYVAA----ERAGLNVREVPNTG 114 (361)
T ss_pred chHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHh-c--CCCCEEEEcCCcchHHHHHH----HhcCCEEEEEecCC
Confidence 3577889999999998 45888899998877766654 2 37899999999998887654 346788877643
Q ss_pred --------hhhhc-cC-------CCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccce
Q 001579 289 --------KDIDY-KS-------GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK-PPGELGAD 350 (1050)
Q Consensus 289 --------~~l~~-l~-------~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaD 350 (1050)
+++++ ++ +++++|++++| |.+|.+.|+++|+++||++|++++|+ +..+.+.+. ++.++|+|
T Consensus 115 ~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD-~a~~~g~~~~~~~~~~~d 193 (361)
T cd06452 115 HPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLN-GAYTVGRMPVSGKELGAD 193 (361)
T ss_pred CCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEE-CCcccCCcCCCHHHcCCC
Confidence 23433 33 37899999998 56999999999999999999999994 345555442 34578999
Q ss_pred EEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHH
Q 001579 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (1050)
Q Consensus 351 ivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~ 429 (1050)
++++|+ |.|+.| +.+||+++++++.+++-... .+ |.+. + .....+|++. .+.+++
T Consensus 194 ~~~~s~~K~l~~~-----~~~G~l~~~~~~~~~l~~~~---------~~-~~~~-----~-~~~~~~~~~~---~~~~~~ 249 (361)
T cd06452 194 FIVGSGHKSMAAS-----APIGVLATTEEWADIVFRTS---------QM-FKIK-----E-VELLGCTLRG---APLVTL 249 (361)
T ss_pred EEEecCCccccCC-----CCeEEEEECHHHHHHHhccc---------cc-cccc-----e-eeeeccccCc---hHHHHH
Confidence 999998 777533 35789999988877652110 00 1110 0 0001123222 233344
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC-CCEEEcCC--CCccEEEEecCC-----------HHHHHHHHHHc
Q 001579 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL--PFFDTVKVKCAD-----------AHAIASAAYKI 495 (1050)
Q Consensus 430 ~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~-G~~~l~~~--~~~~~v~i~~~~-----------~~~i~~~L~~~ 495 (1050)
++++ .+. .+-++. ..+..+++++++++|+++ | ++++.. ...+.+.++.+. +.++.+.|.++
T Consensus 250 ~~al--~~~-~~~~~~-~~~~~~~~~~l~~~L~~l~g-~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 324 (361)
T cd06452 250 MASF--PHV-KERVKR-WDEEVEKARWFVAELEKIEG-IKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKR 324 (361)
T ss_pred HHHH--HHH-HHHHHH-HHHHHHHHHHHHHHHhcCCC-eEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHc
Confidence 4443 111 122333 344456779999999999 6 998731 111223333321 34699999999
Q ss_pred Cceeeeec-CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 496 EMNLRVVD-SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 496 GI~~~~~~-~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
||.+.... +..+|++. ...|++|+++|+++|+
T Consensus 325 gI~~~~~~~~~~~ri~~-~g~~~e~~~~l~~al~ 357 (361)
T cd06452 325 GIHGIKPGLTRYFKLST-YGLTWEQVEYVVDAFK 357 (361)
T ss_pred CceEEcCCCceEEEEEe-cCCCHHHHHHHHHHHH
Confidence 99863322 34678877 3479999999999996
No 162
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.73 E-value=9.2e-16 Score=181.97 Aligned_cols=327 Identities=18% Similarity=0.236 Sum_probs=212.3
Q ss_pred cccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHH
Q 001579 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair 669 (1050)
...+|+|..++..++..+.....-+..+ + + .+...++.+.|++++..+ ...++.+||++++++++..+|
T Consensus 93 ~~~lGH~~p~v~~Ai~~ql~~l~~~~~~--~-~-------~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr 162 (459)
T PRK11522 93 IFNVGHRNPVVVSAVQNQLAKQPLHSQE--L-L-------DPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAK 162 (459)
T ss_pred hhhcCCCCHHHHHHHHHHHhhCcccccc--c-C-------CHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHH
Confidence 4568888887777766653221111111 1 1 133457888898887532 234678999999999999988
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCCE------------EEEEcCCCCCCCCHHHHHHHHHc---CCCCEEE
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDAKGNINIEELRKAAEA---NRDNLST 733 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~~------------vv~V~~d~~g~iD~e~L~~~i~~---~~~~taa 733 (1050)
.|...+| |.+|| ...++||....+....|-. +..+|+ .|.+++++++++ +++++++
T Consensus 163 ~~t~~~g---r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~~~~iAa 234 (459)
T PRK11522 163 AYQSPRG---KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-----GNIEAMRTALSECKKTGDDVAA 234 (459)
T ss_pred HHhccCC---CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-----CCHHHHHHHHHHhhccCCcEEE
Confidence 8753333 44455 5678999887665433311 222232 378899988864 3467888
Q ss_pred EEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc------c--CcEEEeCCccccccCCCC
Q 001579 734 LMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCIPHGG 801 (1050)
Q Consensus 734 V~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~------G--aDv~~~~~hKtf~~P~g~ 801 (1050)
|+++.. +..|++.+ .++++.++|++||+++|+|.++ .|+.+.|.+ | +|++++ .|.++ +
T Consensus 235 vIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~----tG~GRtG~~~a~e~~gv~PDivt~--gK~lg----g 304 (459)
T PRK11522 235 VILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ----TGMGRTGKMFACEHENVQPDILCL--AKALG----G 304 (459)
T ss_pred EEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce----ecCCccchhhhhhccCCCCCEEEe--chhhh----C
Confidence 888754 45677752 2999999999999999999874 456666643 2 688866 58763 3
Q ss_pred C-CCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHH
Q 001579 802 G-GPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNAN 880 (1050)
Q Consensus 802 G-GPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~ 880 (1050)
| -| +|.+++++++...+..... ...+++.|++..++++.+.|..+-.+++. ++...+.+
T Consensus 305 G~~P-igav~~~~~i~~~~~~~~~----------------~~~~T~~gnp~~~Aaala~L~~i~~~~l~---~~~~~~g~ 364 (459)
T PRK11522 305 GVMP-IGATIATEEVFSVLFDNPF----------------LHTTTFGGNPLACAAALATINVLLEQNLP---AQAEQKGD 364 (459)
T ss_pred CCcc-ceeEEEcHHHHHHhccCCc----------------ccCCCCCCCHHHHHHHHHHHHHHhcchHH---HHHHHHHH
Confidence 3 25 5556666665443211000 01123456777888889999998776654 45557788
Q ss_pred HHHHHHhcc---CC-ee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCC
Q 001579 881 YMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESES 954 (1050)
Q Consensus 881 yl~~~L~~~---~~-v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t 954 (1050)
||.++|+++ ++ ++ ..|. |.. +-+.+.+ ......+.+.|.++|+.+.... +-.+.+|+.|+..+|
T Consensus 365 ~l~~~L~~l~~~~~~~i~~VrG~-Gl~---~giel~~-----~~~~~~i~~~l~~~Gvl~~~~~-~~~~~lr~~Ppl~~t 434 (459)
T PRK11522 365 YLLDGFRQLAREYPDLVQEARGK-GML---MAIEFVD-----NEIGYNFASEMFRQRVLVAGTL-NNAKTIRIEPPLTLT 434 (459)
T ss_pred HHHHHHHHHHHhCCCceeeEEec-eeE---EEEEecC-----chHHHHHHHHHHHCCeEEEecC-CCCCEEEEECCccCC
Confidence 999999875 33 21 1221 222 2233321 1125678899999999975321 124789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 001579 955 KEELDRYCDALISIREEIAQI 975 (1050)
Q Consensus 955 ~eeid~fv~aL~~i~~ei~~~ 975 (1050)
++|||+++++|.+++.++.+.
T Consensus 435 ~~~id~~l~~l~~~l~~~~~~ 455 (459)
T PRK11522 435 IEQCEQVLKAARKALAAMRVS 455 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999888763
No 163
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.73 E-value=1.2e-15 Score=178.31 Aligned_cols=320 Identities=19% Similarity=0.220 Sum_probs=201.4
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
..||++...+..++..+. ....+.. ..+ ..+...++.+.|+++++.+.+ +..++|++|+++++.++|.|
T Consensus 43 ~~lGh~~p~v~~a~~~~~-~~~~~~~-~~~--------~~~~~~~la~~l~~~~~~~~v-~~~~sGseA~~~al~~ar~~ 111 (389)
T PRK01278 43 NSLGHAHPHLVEALKEQA-EKLWHVS-NLY--------RIPEQERLAERLVENSFADKV-FFTNSGAEAVECAIKTARRY 111 (389)
T ss_pred ccCCCCCHHHHHHHHHHH-HhcCccc-ccc--------CChHHHHHHHHHHhhCCCCEE-EEcCCcHHHHHHHHHHHHHH
Confidence 357887776666655542 2111111 111 113345788999999877654 56789999999999999988
Q ss_pred HHhcCCCCCCEEEE-cCCCCCccHHHHHhCCCEEEE---EcCCCCC----CCCHHHHHHHHHcCCCCEEEEEEEcCC-Cc
Q 001579 672 HKARGDHHRNVCII-PVSAHGTNPATAAMCGMKIVS---VGTDAKG----NINIEELRKAAEANRDNLSTLMVTYPS-TH 742 (1050)
Q Consensus 672 ~~~~G~~~r~~Vli-p~saHgt~pa~a~~~G~~vv~---V~~d~~g----~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~ 742 (1050)
+..+|+++|++||+ ..++||.........|..... .+...+. ..|+++++++++ +++++|+++.++ ..
T Consensus 112 ~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~~avivep~~~~~ 188 (389)
T PRK01278 112 HYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT---PNTAAILIEPIQGEG 188 (389)
T ss_pred HHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC---CCeEEEEEecccCCC
Confidence 77777655666765 557898877665444432211 0111111 258999999996 689999998654 45
Q ss_pred cccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCc------c--cCcEEEeCCccccccCCCCCCCcceeeee
Q 001579 743 GVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1050)
Q Consensus 743 Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~------~--GaDv~~~~~hKtf~~P~g~GGPg~G~i~v 811 (1050)
|++. +++++|+++|++||+++++|+++. |+.+.|. + .+|++++ .|.++ +|..+|.+++
T Consensus 189 G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~----g~g~~g~~~~~~~~~~~pdi~t~--sK~l~-----~G~~ig~~~~ 257 (389)
T PRK01278 189 GIRPAPDEFLKGLRQLCDENGLLLIFDEVQC----GMGRTGKLFAHEWAGVTPDIMAV--AKGIG-----GGFPLGACLA 257 (389)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEecccc----CCCcCCcceeecccCCCCCEEEE--ehhcc-----CCcceEEEEE
Confidence 6332 379999999999999999998753 3433332 2 2566654 68874 4577899999
Q ss_pred cccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--
Q 001579 812 KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-- 889 (1050)
Q Consensus 812 ~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-- 889 (1050)
++++.+.+.... .....+ +++..++++.+.+..+-.+++. ++...+.++++++|+++
T Consensus 258 ~~~~~~~~~~~~--------------~~~t~~----~~~~~~aaa~a~l~~l~~~~~~---~~~~~~~~~l~~~l~~l~~ 316 (389)
T PRK01278 258 TEEAAKGMTPGT--------------HGSTYG----GNPLAMAVGNAVLDVILAPGFL---DNVQRMGLYLKQKLEGLVD 316 (389)
T ss_pred cHHHHhccCCCC--------------CCCCCC----ccHHHHHHHHHHHHHHhhhHHH---HHHHHHHHHHHHHHHHHHh
Confidence 887766542110 001112 2344455566666666444333 33445667777777764
Q ss_pred -CC-ee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 001579 890 -YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 890 -~~-v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL 965 (1050)
++ +. ..+ .|.. +.+.+. .+..+++++|.++|+.+.... .+.+||+|+...++++|+++++.|
T Consensus 317 ~~~~~~~~v~g-~G~~---~~i~~~-------~~~~~~~~~l~~~GV~~~p~~---~~~lR~~p~~~~~~~~i~~~l~~l 382 (389)
T PRK01278 317 RFPDVIEEVRG-KGLL---LGLKCV-------VPNRDLVQALRDEGLLTVGAG---DNVVRLLPPLIITEEEIDEALERL 382 (389)
T ss_pred hCCCceeeEec-ccEE---EEEEEe-------cCHHHHHHHHHHCCeEEeecC---CCEEEEeCCcccCHHHHHHHHHHH
Confidence 22 21 111 1211 123322 246789999999999864222 378999999889999999999999
Q ss_pred HHHHHH
Q 001579 966 ISIREE 971 (1050)
Q Consensus 966 ~~i~~e 971 (1050)
.+++++
T Consensus 383 ~~~l~~ 388 (389)
T PRK01278 383 ERAAES 388 (389)
T ss_pred HHHHHh
Confidence 887754
No 164
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.72 E-value=7e-16 Score=181.64 Aligned_cols=328 Identities=17% Similarity=0.207 Sum_probs=216.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCCcccc----ccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHH
Q 001579 139 MKFSKFDEGLTESQMIEHMQKLASMNKVYKS----FIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLL 214 (1050)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~~~~~----~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~ 214 (1050)
-.+| +.++.+.+++.++..+..++..+.. +...+.-++.+|++..+.+.. +..-+.-.++.+.++.+.-.
T Consensus 31 ~~~p--~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~----~~~~nl~d~~~~p~a~~~E~ 104 (460)
T COG0076 31 RMAP--EKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVS----ALNKNLGDPDESPAAAELEE 104 (460)
T ss_pred ccCC--ccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHH----HHhhcCCCcccChhHHHHHH
Confidence 3455 5789999999999999777765422 334444456677776544432 11113334555667888888
Q ss_pred HHHHHHHHhcCC-CCcceeEecchHHHHHHHHHHhhhhc----C-------CCCEEEEcCCCChhHHHHHHHhccCCCeE
Q 001579 215 NFQTMIADLTGL-PMSNASLLDEGTAAAEAMAMCNNIQK----G-------KKKTFIIASNCHPQTIDICITRADGFDIK 282 (1050)
Q Consensus 215 e~q~~ia~L~G~-~~anasl~d~~Taa~eA~~la~~~~~----~-------~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~ 282 (1050)
+.-.|+++|+|. +.+...++.|||.++.-.+++.+... . ...+||+|...|.++.+.++. +|++
T Consensus 105 ~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~----lG~~ 180 (460)
T COG0076 105 RVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARY----LGLG 180 (460)
T ss_pred HHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHH----hCCC
Confidence 888999999999 55678888999966553333322110 0 123799999999999998754 3544
Q ss_pred EEEcC---------chhhhc-cCCCeeE--EEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCcccc--CCCCCCcc
Q 001579 283 VVVSD---------LKDIDY-KSGDVCG--VLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALT--ILKPPGEL 347 (1050)
Q Consensus 283 v~~~~---------~~~l~~-l~~~t~~--V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg--~l~~pg~~ 347 (1050)
.+.++ +++|++ +++++.+ |+.+.+ +.+|.++||++|+++|+++|++++|+|-.-+.- .....+.|
T Consensus 181 ~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~ 260 (460)
T COG0076 181 LRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW 260 (460)
T ss_pred ceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchh
Confidence 44442 346666 7777776 777777 468999999999999999999999966322221 12233443
Q ss_pred -----cceEEEecC-ccccccCCCCCcceEEEEEehh--hhhcCC--CcEEeEeecCCCCcceEEecccccccccccccC
Q 001579 348 -----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMMP--GRIVGVSIDSSGKPALRVAMQTREQHIRRDKAT 417 (1050)
Q Consensus 348 -----GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~--~~r~lp--grivG~s~d~~g~~~~~l~lqtreq~irRekaT 417 (1050)
+||-++.++ |.+..|.+ +|.+..|++ +.+.+- ..+.+.+ +.+.+.+.. +|
T Consensus 261 ~f~l~~vdSIt~d~HK~g~aP~~-----~G~il~rd~e~l~~~~~~~~~yl~~~----~~~~~ti~~-sr---------- 320 (460)
T COG0076 261 DFGLEGVDSITVDGHKYGLAPIG-----CGVVLFRDEEALRRILIFADYYLPGG----GIPNFTILG-SR---------- 320 (460)
T ss_pred hcCCCCceEEEECcccccCCCCC-----ceEEEEECHHHhhhhhhcccccCCCC----CcCceeEee-cc----------
Confidence 799999999 55555754 566777765 333221 1111100 112222211 11
Q ss_pred CCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC----HHHHHHHHH
Q 001579 418 SNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASAAY 493 (1050)
Q Consensus 418 snict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~----~~~i~~~L~ 493 (1050)
. .....+.-+. +.++|.+|++++.+++.+++++|+++|++.|.+++++++..+.|+|+.++ ..+..+.+.
T Consensus 321 -~---~~~~~~~~~~--l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~~~~~~~~~~~~ 394 (460)
T COG0076 321 -P---GRQALALYAN--LRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSERLD 394 (460)
T ss_pred -c---hHHHHHHHHH--HHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCCcccchhchHHHHH
Confidence 0 0111122222 58999999999999999999999999999977999988888899998754 345666777
Q ss_pred HcCceeeee
Q 001579 494 KIEMNLRVV 502 (1050)
Q Consensus 494 ~~GI~~~~~ 502 (1050)
..|+.+...
T Consensus 395 ~~gw~v~~~ 403 (460)
T COG0076 395 RRGWQVPAQ 403 (460)
T ss_pred hcCceeecc
Confidence 789987653
No 165
>PRK05965 hypothetical protein; Provisional
Probab=99.72 E-value=2.6e-15 Score=178.49 Aligned_cols=341 Identities=14% Similarity=0.154 Sum_probs=215.5
Q ss_pred ccccccccCcchhhhhcccccccccc-CCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVI 668 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llai 668 (1050)
..+|+|...+..++..+. ....+.. ...+. .+...++.+.|++++. ++.+ ++.++|+++++++++.+
T Consensus 58 ~~lGh~~p~i~~Ai~~q~-~~~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~v-~f~~sGSEAve~AlKlA 127 (459)
T PRK05965 58 VNVGYGQESIVEAAAEQM-RELPYATGYFHFG--------SEPAIRLAAKLAERAPGSLNHV-YFTLGGSDAVDSAVRFI 127 (459)
T ss_pred ccCCCCCHHHHHHHHHHH-HhcCCcccccccC--------CHHHHHHHHHHHhhCCCCcCEE-EEeCChhHHHHHHHHHH
Confidence 467888887777766653 2222211 10111 1234578889999874 3443 66789999999999999
Q ss_pred HHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhC---------CC---EEEEEcCCCC----CCCC--------HHHHHHH
Q 001579 669 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMC---------GM---KIVSVGTDAK----GNIN--------IEELRKA 723 (1050)
Q Consensus 669 r~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~---------G~---~vv~V~~d~~----g~iD--------~e~L~~~ 723 (1050)
|.|...+|.++|++|| ...++||..-.+.... |. .+..++.... ..-| ++++++.
T Consensus 128 r~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 207 (459)
T PRK05965 128 RHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAK 207 (459)
T ss_pred HHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHH
Confidence 9987666755566666 5778999865432221 10 1233433210 0123 3678888
Q ss_pred HHcCC-CCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeC
Q 001579 724 AEANR-DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 790 (1050)
Q Consensus 724 i~~~~-~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~ 790 (1050)
+++++ +++++|+++.. ...|++. ..++++.++|++||+++|+|.+ +.||.+.|.+ -+|++++
T Consensus 208 i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~- 282 (459)
T PRK05965 208 VAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEV----ITGFGRTGPLFACEAEGVVPDLMTV- 282 (459)
T ss_pred HHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEech----hccCccCchhhhHhhcCCCCCeEEe-
Confidence 87654 68999998864 3456654 2589999999999999999976 6788787754 2699887
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ +|--.+|.+++++++.+.+....- . .......+++.|+++.++++.+.|..+-++++.+
T Consensus 283 -gKgl~----gG~~Pi~av~~~~~i~~~~~~~~~----------~-~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~ 346 (459)
T PRK05965 283 -AKGLT----SGYVPMGAVLMSDHVYQGIADGAG----------A-AAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLA 346 (459)
T ss_pred -chhhc----cCCcceeEEEEcHHHHHHHhcccc----------c-cccccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 58774 332347778888877654421100 0 0000111234567888888999999987776554
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEecccccc-cCC--C---CHHHHHHHHHHCCcccCCCCCC
Q 001579 871 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKN-TAG--I---EPEDVAKRLMDYGFHGPTMSWP 940 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~-~~g--~---~~~~vakrL~d~Gi~~~~~~~p 940 (1050)
. .....++|.++|+++ ++++ ..|. |.. +.+.+..-.. ... . -...+.+++.++|+.+....
T Consensus 347 ~---~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl~---~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-- 417 (459)
T PRK05965 347 N---GQKAGPRFAAGLDALRAHPLVGDVRGR-GLL---GALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFG-- 417 (459)
T ss_pred H---HHHHHHHHHHHHHhhccCCCEEEEeec-ceE---EEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecC--
Confidence 3 446788888888775 2221 1221 221 1222210000 000 0 13467778889999875322
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 941 VPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 941 v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
.+.|++.|+...|++|||+++++|.+++.++.
T Consensus 418 -~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~ 449 (459)
T PRK05965 418 -DGVLGFAPALCCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred -CcEEEEECCCcCCHHHHHHHHHHHHHHHHHHh
Confidence 36799999999999999999999999998763
No 166
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.72 E-value=2e-16 Score=181.49 Aligned_cols=280 Identities=16% Similarity=0.202 Sum_probs=182.9
Q ss_pred HHHHHHHHHhhCCCeeeeccCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa-~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g 713 (1050)
.++++.+++++|++...+..++|+ ++...++ +.+. .++++|++++..++.+...+...|++++.+++++++
T Consensus 57 ~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~---~~l~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 128 (346)
T TIGR01141 57 AELKQALADYYGVDPEQILLGNGSDEIIELLI---RAFL-----EPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDG 128 (346)
T ss_pred HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHH---HHhc-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCC
Confidence 478899999999765444444444 4432232 3221 145789998876544444567899999999998889
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHc--CCEEEEeccccccccccCCC----CcccCcE
Q 001579 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSP----GYIGADV 786 (1050)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~--G~~v~vD~A~~~al~gl~~p----g~~GaDv 786 (1050)
.+|+++|+++++ +++++|++++| |.+|.+. +++++.++++.+ |+++++|+++.. +..-..+ ....-++
T Consensus 129 ~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~-~~~~~~~l~~~~~~~~~ii~D~~y~~-~~~~~~~~~~~~~~~~~i 203 (346)
T TIGR01141 129 QLDLEDILVAID---DKPKLVFLCSPNNPTGNLL-SRSDIEAVLERTPEDALVVVDEAYGE-FSGEPSTLPLLAEYPNLI 203 (346)
T ss_pred CCCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchhh-hcCCccHHHHHhhCCCEE
Confidence 999999999875 78999999999 4789987 788888888877 999999998541 1111011 1122346
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+..+++|+|+. +|+++|++++++++.+.+.... ...+++ ...+ .++.+++... .
T Consensus 204 ~~~S~sK~~g~----~G~r~G~~~~~~~~~~~~~~~~--------------~~~~~~--~~~~----~~~~~~l~~~--~ 257 (346)
T TIGR01141 204 VLRTLSKAFGL----AGLRIGYAIANAEIIDALNKVR--------------APFNLS--RLAQ----AAAIAALRDD--D 257 (346)
T ss_pred EEehhhHhhhc----hhhhceeeecCHHHHHHHHhcc--------------CCCCCC--HHHH----HHHHHHhCCH--H
Confidence 67888999853 4678999999887665542110 001111 1112 2223333322 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC-CCC-CCCE
Q 001579 867 GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP-VPGT 944 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~-~~p-v~~~ 944 (1050)
.+++..++...+++++.+.|+++..+....+.+. -+.++++ + +.+++.++|.++||.+... .|+ ..+.
T Consensus 258 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~---~~~~~~~------~-~~~~~~~~L~~~gI~v~~g~~f~~~~~~ 327 (346)
T TIGR01141 258 FIEKTVEEINAERERLYDGLKKLPGLEVYPSDAN---FVLIRFP------R-DADALFEALLEKGIIVRDLNSYPGLPNC 327 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEECCCcCC---EEEEecC------C-CHHHHHHHHHHCCeEEEeCCCcCCCCCe
Confidence 3566666777888899999986522211111222 2445554 2 5789999999999987433 332 3588
Q ss_pred EEEEcCCCCCHHHHHHHHHHHH
Q 001579 945 LMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 945 lrI~~te~~t~eeid~fv~aL~ 966 (1050)
+|++++ +++|+++++++|+
T Consensus 328 iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 328 LRITVG---TREENDRFLAALR 346 (346)
T ss_pred EEEecC---CHHHHHHHHHHhC
Confidence 999975 7899999999873
No 167
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.72 E-value=1.6e-15 Score=177.76 Aligned_cols=280 Identities=20% Similarity=0.262 Sum_probs=187.6
Q ss_pred HHHHHHHHHhhCCC--eeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCC----------
Q 001579 635 NNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM---------- 702 (1050)
Q Consensus 635 ~el~~~lael~G~d--~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~---------- 702 (1050)
.++.+++++++|.+ ...+..++|+++.++++.+++. .| +++.|.+..++||.........|.
T Consensus 88 ~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~----~g--~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 161 (398)
T PRK03244 88 IALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARL----TG--RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPL 161 (398)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHH----HC--CCeEEEECCCcCCccHHHHhccCCcccccCCCCC
Confidence 47889999998854 2346678898888777666553 22 233444456889887665544332
Q ss_pred --EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEecccccccccc
Q 001579 703 --KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1050)
Q Consensus 703 --~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~d---i~eI~~la~~~G~~v~vD~A~~~al~gl 776 (1050)
+++.++. .|+++|+++++ +++++|+++.+ |..|.+.++ +++|.++|+++|+++++|+++. |+
T Consensus 162 ~~~~~~~~~-----~d~~~l~~~~~---~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~----g~ 229 (398)
T PRK03244 162 PGGVEHVPY-----GDVDALAAAVD---DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQT----GI 229 (398)
T ss_pred CCCceEeCC-----CCHHHHHHhhc---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----CC
Confidence 2333333 38999999885 68999999877 567887633 8999999999999999999853 33
Q ss_pred CCCCc--------ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhh
Q 001579 777 TSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1050)
Q Consensus 777 ~~pg~--------~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g 848 (1050)
.+.|. ...|++++ .|+|+ ||-++|++++++++.+.+.... + ... +.+
T Consensus 230 gr~g~~~~~~~~~~~pDi~t~--sK~l~-----~G~~ig~~~~~~~~~~~~~~~~---------~-----~~t----~~~ 284 (398)
T PRK03244 230 GRTGAWFAHQHDGVTPDVVTL--AKGLG-----GGLPIGACLAFGPAADLLTPGL---------H-----GST----FGG 284 (398)
T ss_pred cccchHHhhhhhCCCCCEEEE--chhhh-----CCcccEEEEEcHHHHhhccCCC---------C-----cCC----CCC
Confidence 33332 23688766 59884 4556889988887766542110 0 011 123
Q ss_pred hHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCee--ecCCCCccceeEEEecccccccCCCCHHHHHH
Q 001579 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (1050)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vak 925 (1050)
++..++++.+++..+..+.+. ++.....++|.++|++. +++. ..+ .|.. +.+.++. ....++.+
T Consensus 285 ~~~~~aaa~a~l~~~~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~v~g-~g~~---~~i~~~~------~~~~~~~~ 351 (398)
T PRK03244 285 NPVACAAALAVLDTIASEGLL---ENAERLGEQLRAGIEALGHPLVDHVRG-RGLL---LGIVLTA------PVAKAVEA 351 (398)
T ss_pred CHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHhcCCCceeeEee-ccEE---EEEEEec------cHHHHHHH
Confidence 455566677787777655444 44456688899999874 3321 112 1211 2333321 14578999
Q ss_pred HHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 926 RLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 926 rL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
+|.++|+.+.... .+.||++|+..+|++|||+++++|.+++.+++
T Consensus 352 ~l~~~Gv~~~~~~---~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 352 AAREAGFLVNAVA---PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred HHHHCCeEEeecC---CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 9999999875432 37899999999999999999999999987654
No 168
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.72 E-value=1.8e-15 Score=178.28 Aligned_cols=332 Identities=16% Similarity=0.194 Sum_probs=212.3
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llair 669 (1050)
..+|++...+..++..+.... .+....-+. .+...++.+.|++++. ++.+ ++.++|+++++++++.+|
T Consensus 56 ~~lGh~~p~v~~ai~~q~~~~-~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~v-~f~~sGseAve~AlklAr 125 (429)
T PRK06173 56 ALHGYNHPRLNAAATNQLAKM-SHIMFGGFT--------HEPAVELAQKLLEILPPSLNKI-FFADSGSVAVEVAMKMAL 125 (429)
T ss_pred ccCCCCCHHHHHHHHHHHHhc-CCccccccC--------CHHHHHHHHHHHhhCCCCcCEE-EEeCCchHHHHHHHHHHH
Confidence 367888877776666553221 111100011 1234578888999874 4443 667899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC--------C-----EEEEEcCCCC------CCCCHHHHHHHHHcCCC
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M-----KIVSVGTDAK------GNINIEELRKAAEANRD 729 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G--------~-----~vv~V~~d~~------g~iD~e~L~~~i~~~~~ 729 (1050)
.|...+|.++|.+|+ ...++||....+....| + .+..+|.... ...+++.|++.++++.+
T Consensus 126 ~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~ 205 (429)
T PRK06173 126 QYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGD 205 (429)
T ss_pred HHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCC
Confidence 987666655566666 56789996443322211 0 1233443210 11257778888977678
Q ss_pred CEEEEEEEcC--CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCccccc
Q 001579 730 NLSTLMVTYP--STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFC 796 (1050)
Q Consensus 730 ~taaV~vt~P--n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~hKtf~ 796 (1050)
++++|+++.- ...|++. ..+++++++|++||+++++|.++ .|+.+.|.+ -+|++++ .|.++
T Consensus 206 ~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~----tG~GrtG~~~a~~~~gv~PDiv~~--gK~l~ 279 (429)
T PRK06173 206 EIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA----TGFGRTGKLFALEHAGVVPDIMCI--GKALT 279 (429)
T ss_pred cEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh----cCCCcCCcchHHHhcCCCCCEEEe--ehhhh
Confidence 8999999862 4456653 25999999999999999999874 445555532 3688875 58773
Q ss_pred cCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHH
Q 001579 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1050)
Q Consensus 797 ~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1050)
+|-..++.+.+++++.+.+..... + .. ...+++.|+++.++++.+.|..+-++++. ++..
T Consensus 280 ----gG~~p~~a~~~~~~i~~~~~~~~~----------~--~~-~~~~T~~g~p~~~aaa~a~l~~i~~~~~~---~~~~ 339 (429)
T PRK06173 280 ----GGYLTLSATITTEAIAQTICSGEA----------K--CF-MHGPTFMANPLACAIAAESIRLLLESPWQ---QNIQ 339 (429)
T ss_pred ----CCccccceEEecHHHHHHHhcCCC----------C--cc-ccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHH
Confidence 332456777777776665431100 0 00 01112335677788888889888666553 4455
Q ss_pred HHHHHHHHHHhcc--CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCC
Q 001579 877 LNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTES 952 (1050)
Q Consensus 877 ~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~ 952 (1050)
++.++|.++|++. ++.+ ..| .|. + +-+.+.. ......+.++|.++|+.+... .+.|++.|+..
T Consensus 340 ~~g~~l~~~L~~~~~~~~v~~vRg-~Gl-~--~~iel~~-----~~~~~~i~~~l~e~Gi~v~~~----g~~l~~~Ppl~ 406 (429)
T PRK06173 340 RIEAQLKQELAPAAEFDSVAEVRV-LGA-I--GVVEMKE-----PVNMATLQPRFVEHGIWVRPF----GKLVYIMPPFI 406 (429)
T ss_pred HHHHHHHHHHHHhhcCCCeeeeec-cce-E--EEEEeCC-----cccHHHHHHHHHHCCeEEEec----CCEEEEeCCcc
Confidence 7788999999754 3322 112 122 1 2233321 124578999999999987533 36899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q 001579 953 ESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 953 ~t~eeid~fv~aL~~i~~ei 972 (1050)
.|++|||+++++|.+++.++
T Consensus 407 it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 407 ISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764
No 169
>PLN02624 ornithine-delta-aminotransferase
Probab=99.72 E-value=2e-15 Score=180.20 Aligned_cols=293 Identities=19% Similarity=0.300 Sum_probs=190.1
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHh-cCCC-CCCEEE-EcCCCCCccHHHHHhCCC--------
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGDH-HRNVCI-IPVSAHGTNPATAAMCGM-------- 702 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~-~G~~-~r~~Vl-ip~saHgt~pa~a~~~G~-------- 702 (1050)
..++.+.|++++|++.+ ++.+||++++++++...|.|+.. +|.. .+.+|+ ...+.||....+..+.|-
T Consensus 119 ~~~la~~L~~~~~~~~~-~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~ 197 (474)
T PLN02624 119 FPEFAEYLTSMFGYDMV-LPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFG 197 (474)
T ss_pred HHHHHHHHHhhcCCCeE-EEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCC
Confidence 45788999999988765 56789999999999988887432 3322 233444 466889986665433221
Q ss_pred ----EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEecccccccc
Q 001579 703 ----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQV 774 (1050)
Q Consensus 703 ----~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~ 774 (1050)
.+..++. .|++.|++.++.+.+++++|+++.+ +..|++.+ .+++|.++|++||+++++|+++.
T Consensus 198 ~~~~~~~~~~~-----~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t---- 268 (474)
T PLN02624 198 PLLPGHLKVDF-----GDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT---- 268 (474)
T ss_pred CCCCCceEeCC-----CCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----
Confidence 1233443 3789999999866678999999887 46787652 29999999999999999999853
Q ss_pred ccCCCCc--------ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcch
Q 001579 775 GLTSPGY--------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAP 846 (1050)
Q Consensus 775 gl~~pg~--------~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~ 846 (1050)
|+.+.|. ..+|++++ .|.|+ +|+..+|.+++++++...+.... .+. ++
T Consensus 269 G~GrtG~~~a~~~~~i~pDiv~l--sK~lg----gG~~pigav~~~~~i~~~~~~~~---------------~~~---T~ 324 (474)
T PLN02624 269 GLARTGKMLACDWEEVRPDVVIL--GKALG----GGVIPVSAVLADKDVMLCIKPGE---------------HGS---TF 324 (474)
T ss_pred CcCcCcchhhHHhcCCCCCEEEe--ccccc----CCCCcceeeeecHHHHhHhccCC---------------cCC---CC
Confidence 3444432 23677776 48664 56667888888876654331100 001 11
Q ss_pred hhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--ecCCCCccceeEEEecccccccCCCCH
Q 001579 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FRGVNGTVAHEFIVDLRGLKNTAGIEP 920 (1050)
Q Consensus 847 ~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~-v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~ 920 (1050)
.+++..++++.+.+..+..+++.+ +...+.++++++|+++ ++ ++ ..| .| .+..+.++... ......
T Consensus 325 ~g~pl~~aaa~aaLe~l~~~~l~~---~~~~~~~~l~~~L~~l~~~~~~~i~~vrg-~G-~~~~i~l~~~~---~~~~~a 396 (474)
T PLN02624 325 GGNPLASAVAMAALQVVQDEKLAE---RSAKLGQELRDQLQKIQKQFPKLIKEVRG-RG-LLNAVVLNSPK---LGPVSA 396 (474)
T ss_pred CCCHHHHHHHHHHHHHHHhchHHH---HHHHHHHHHHHHHHHHHHhCCCceEEEEe-eE-EEEEEEecCCC---cChHHH
Confidence 234445555666677665555443 3445677888877764 22 11 112 12 22222333210 001235
Q ss_pred HHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 921 EDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 921 ~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
.++++.|.++|+.+.... .+.|||+|+..+|++|||++++.|.+++++
T Consensus 397 ~~~~~~L~e~GV~v~p~~---~~~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 397 YDVCLKLKERGLLAKPTH---DTIIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred HHHHHHHHhCCeEEecCC---CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 689999999999974322 478999999999999999999999988754
No 170
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.72 E-value=7.8e-16 Score=194.53 Aligned_cols=319 Identities=14% Similarity=0.140 Sum_probs=198.2
Q ss_pred ccHHHHHHHHHHHHHHhhCCCee--e-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhCC
Q 001579 628 QGYQEMFNNLGEWLCTITGFDSF--S-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCG 701 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d~~--~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~---a~~~G 701 (1050)
+-..+.+++.++.+++++|.+.. . +++.++++|. .+++..+. ..++++||++...|.++-.. ++..|
T Consensus 74 ~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~al---nlva~~l~----~~~gd~Iv~t~~eH~svl~~~~~a~~~G 146 (805)
T PLN02724 74 MRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAAL---KLVGETFP----WSSESHFCYTLENHNSVLGIREYALEKG 146 (805)
T ss_pred hhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHH---HHHHHHCC----CCCCCeEEEeeccccchHHHHHHHHHcC
Confidence 33567899999999999998642 2 3333344333 33334331 12457888888878765543 34569
Q ss_pred CEEEEEcCC--------CCCCCCH--HHHHHHHH----c---CCCCEEEEEEEcC-CCccccccCHHHHHHHHHHc----
Q 001579 702 MKIVSVGTD--------AKGNINI--EELRKAAE----A---NRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN---- 759 (1050)
Q Consensus 702 ~~vv~V~~d--------~~g~iD~--e~L~~~i~----~---~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~---- 759 (1050)
++++.++++ .+|.+|+ ++|++.++ . ..++|++|.++.- |.+|.+. |+++|..+++..
T Consensus 147 ~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~-pi~~i~~~~~~~~~~~ 225 (805)
T PLN02724 147 AAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKF-PLDLVKLIKDNQHSNF 225 (805)
T ss_pred CeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcC-CHHHHHHHHHhccccc
Confidence 999999886 3455654 67777642 1 1256778888876 6799998 799775555432
Q ss_pred ---C-CEEEEeccccccccccCCCCcccCcEEEeCCccccccCCCCCCC-cceeeeecccccCCCCCCcccc-CC-----
Q 001579 760 ---G-GQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVS-TG----- 828 (1050)
Q Consensus 760 ---G-~~v~vD~A~~~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGP-g~G~i~v~~~l~~~lpg~~vg~-~~----- 828 (1050)
| ++++||+||..+...+ ...++|+|++++++||+| ||| |+|++++++++...+....+|. +.
T Consensus 226 ~~~g~~~v~vDaaQ~~g~~pi-Dv~~~~~Dfl~~S~HK~~------GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~ 298 (805)
T PLN02724 226 SKSGRWMVLLDAAKGCGTSPP-DLSRYPADFVVVSFYKIF------GYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIA 298 (805)
T ss_pred ccCcceEEEeehhhhcCCCCC-ChhhcCCCEEEEecceec------cCCCCceEEEEehhhhhhhcCCccCCCceEEEec
Confidence 3 5799999986555433 235689999999999988 456 7899999987655554333322 10
Q ss_pred CC-C-------CCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccC------Ce-e
Q 001579 829 GI-P-------APEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY------PI-L 893 (1050)
Q Consensus 829 ~~-~-------~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~------~v-~ 893 (1050)
+. . ..+.+.+|.++.+ . ..+..|. ..+...|+.++.++...+++|+.++|+++. .+ +
T Consensus 299 ~~~~~~~~~~~~~rfE~GT~n~~~----i-~~l~aal---~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~i 370 (805)
T PLN02724 299 DIDFVKRRERVEQRFEDGTISFLS----I-AALRHGF---KLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVL 370 (805)
T ss_pred ccceeeccccHHHHhcCCCcchhH----H-HHHHHHH---HHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEE
Confidence 00 0 0012334444432 1 2223334 444444677777888889999999998762 13 3
Q ss_pred ecCCC------CccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC--C-------------------------
Q 001579 894 FRGVN------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW--P------------------------- 940 (1050)
Q Consensus 894 ~~g~~------g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~--p------------------------- 940 (1050)
| |+. ......+.|.+.... ...+...++.+.+.++||.+++-.+ |
T Consensus 371 y-g~~~~~~~~~~r~~ivsFnv~~~~-~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~ 448 (805)
T PLN02724 371 Y-GNHTFKLEFHIQGPIVTFNLKRAD-GSWVGHREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCW 448 (805)
T ss_pred c-CCCCCCCCcccccCEEEEEEEcCC-CCEeCHHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccC
Confidence 3 221 011122334443211 0113456677666788998642111 0
Q ss_pred ---------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 941 ---------VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 941 ---------v~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
..|++|+++..++|++|||+|+++|++....
T Consensus 449 ~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~ 488 (805)
T PLN02724 449 DDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVS 488 (805)
T ss_pred chhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhc
Confidence 0288999999999999999999999987644
No 171
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.72 E-value=9.3e-16 Score=179.04 Aligned_cols=297 Identities=17% Similarity=0.220 Sum_probs=193.9
Q ss_pred cccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEE
Q 001579 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~ 706 (1050)
.+|..++..++++++++++|.+. .+..++|+++..+++ +.+. .++|+|++++..|.++...+.+.|.+++.
T Consensus 82 ~~G~~~l~~~l~~~la~~~g~~~-~i~~tsG~~a~~~~~---~~l~-----~~gd~vi~~~~~~~~~~~~~~~~~~~~~~ 152 (397)
T PRK06939 82 ICGTQDLHKELEEKLAKFLGTED-AILYSSCFDANGGLF---ETLL-----GKEDAIISDALNHASIIDGVRLCKAKRYR 152 (397)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCc-EEEEcChHHHHHHHH---HHhC-----CCCCEEEEEhhhhHHHHHHHHhcCCceEE
Confidence 46888888999999999999774 456667776654433 3221 25689999998887666667888999888
Q ss_pred EcCCCCCCCCHHHHHHHHHcC---CCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccC-C--C
Q 001579 707 VGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-S--P 779 (1050)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~---~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~-~--p 779 (1050)
++. .|+++|+++++++ +.++++|+.... +.+|.++ ++++|.++|+++|+++++|+++..+..+.. . +
T Consensus 153 ~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~-~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~ 226 (397)
T PRK06939 153 YAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA-PLPEICDLADKYDALVMVDDSHAVGFVGENGRGTV 226 (397)
T ss_pred eCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHH
Confidence 765 5899999998742 226777776543 4578887 799999999999999999998742221110 0 0
Q ss_pred ---C-cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHH
Q 001579 780 ---G-YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1050)
Q Consensus 780 ---g-~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1050)
+ ..+.|++++++||+|+ |+.+|++++++++.+.+.... .....++.. ....+.+
T Consensus 227 ~~~~~~~~~~i~~~S~sK~~~------g~r~G~v~~~~~~~~~l~~~~-----------~~~~~~~~~-----~~~~~~a 284 (397)
T PRK06939 227 EHFGVMDRVDIITGTLGKALG------GASGGYTAGRKEVIDWLRQRS-----------RPYLFSNSL-----APAIVAA 284 (397)
T ss_pred HHcCCCCCCcEEEEECHHHhC------ccCceEEEeCHHHHHHHHHhC-----------ccccccCCC-----CHHHHHH
Confidence 1 1256899999999983 346689988876655442100 000001111 1111222
Q ss_pred HHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 001579 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1050)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~ 934 (1050)
+.+.+..+. + ..+..++...+.+++.+.|++. +++. . +.+.. +.+.+. .+.+..+++++|.++||.+
T Consensus 285 ~~~al~~~~-~-~~~~~~~~~~~~~~l~~~L~~~~~~~~-~-~~~~~---~~~~~~-----~~~~~~~~~~~L~~~gI~v 352 (397)
T PRK06939 285 SIKVLELLE-E-SDELRDRLWENARYFREGMTAAGFTLG-P-GEHPI---IPVMLG-----DAKLAQEFADRLLEEGVYV 352 (397)
T ss_pred HHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHcCCCcC-C-CCCCE---EEEEEC-----CHHHHHHHHHHHHHCCceE
Confidence 333344432 2 1345556667889999999875 4332 1 11222 122222 1234678999999999986
Q ss_pred CCCCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 935 PTMSWPV----PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 935 ~~~~~pv----~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
....||. .+.+|++++..++++||+++++.|.++++++
T Consensus 353 ~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 353 IGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred eeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 5444442 2579999998899999999999999887664
No 172
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.72 E-value=8.7e-16 Score=178.81 Aligned_cols=295 Identities=17% Similarity=0.211 Sum_probs=190.7
Q ss_pred cccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEE
Q 001579 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~ 706 (1050)
.+|..++..++++++++++|.+. .+..++|+++.++ +++.+. .++++|+++...|+.+...+.+.|.+++.
T Consensus 73 ~~g~~~l~~~l~~~l~~~~g~~~-~i~~~sG~~a~~~---a~~~~~-----~~gd~vi~~~~~~~~~~~~~~~~g~~~~~ 143 (385)
T TIGR01825 73 IAGTLRLHEELEEKLAKFKKTEA-ALVFQSGFNTNQG---VLSALL-----RKGDIVLSDELNHASIIDGLRLTKATKKI 143 (385)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHH---HHHHhC-----CCCCEEEEEccccHHHHHHHHhcCCceEE
Confidence 35777888999999999999764 3566777765543 333321 24578888888887776666788888876
Q ss_pred EcCCCCCCCCHHHHHHHHHcCC-CCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEecccccccccc-CC-----
Q 001579 707 VGTDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TS----- 778 (1050)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~~-~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl-~~----- 778 (1050)
++ .+|++++++.+.++. +++++|++..+ |.+|.+. ++++|+++|+++|+++++|+++.....+. ..
T Consensus 144 ~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~ 217 (385)
T TIGR01825 144 YK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVA-PLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHH 217 (385)
T ss_pred eC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCcc-CHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhh
Confidence 64 378999999887542 36888877765 5679887 79999999999999999999874221110 00
Q ss_pred -CCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHH
Q 001579 779 -PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISY 857 (1050)
Q Consensus 779 -pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1050)
.-..+.|+.+.+++|+|+. +| |+++.++++...+.... .....+. .. .+....++.
T Consensus 218 ~~~~~~~~i~~~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~-----------~~~~~~~-~~----~~~~~~a~~ 274 (385)
T TIGR01825 218 FGLEDKVDIQVGTLSKAIGV------VG-GYAAGHKELIEYLKNRA-----------RPFLFST-AQ----PPAVVAALA 274 (385)
T ss_pred cCCCcCCcEEEEeccHHhhc------CC-CEEecCHHHHHHHHHhC-----------ccccccC-CC----CHHHHHHHH
Confidence 1124678888999999953 33 67777766554432100 0000011 11 111122233
Q ss_pred HHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 001579 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1050)
Q Consensus 858 a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~ 936 (1050)
+.+..+... .+..++...+++++.++|++. +++. .+.++. +.+.+.. ..+..+++++|.++||.++.
T Consensus 275 ~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~~~~---~~~~~~~-----~~~~~~~~~~L~~~gi~v~~ 342 (385)
T TIGR01825 275 AAVDELQRS--PELMERLWDNTRFFKAGLGKLGYDTG--GSETPI---TPVVIGD-----EKAAQEFSRRLFDEGIFAQS 342 (385)
T ss_pred HHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCCC--CCCCCE---EEEEECC-----HHHHHHHHHHHHHCCcEEcc
Confidence 344433221 134445566789999999875 4432 122222 2222221 12357899999999998765
Q ss_pred CCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 937 MSWPV----PGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 937 ~~~pv----~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
..||. .+.+|++++..++++||++++++|++++++
T Consensus 343 ~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 343 IVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred cCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44442 257999999999999999999999998765
No 173
>PLN02483 serine palmitoyltransferase
Probab=99.72 E-value=1.2e-15 Score=182.73 Aligned_cols=297 Identities=17% Similarity=0.200 Sum_probs=188.6
Q ss_pred cHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEc
Q 001579 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~ 708 (1050)
|......++++.+++++|.+.. +..++|..++.+++.++ . .+++.|++++..|.+....+++.|++++.++
T Consensus 143 g~~~~~~ele~~lA~~~g~~~a-i~~~~G~~an~~~i~al----~----~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~ 213 (489)
T PLN02483 143 GTTKLHRELEELVARFVGKPAA-IVFGMGYATNSTIIPAL----I----GKGGLIISDSLNHNSIVNGARGSGATIRVFQ 213 (489)
T ss_pred CCcHHHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHh----C----CCCCEEEEcchhhHHHHHHHHHcCCeEEEEe
Confidence 4445678899999999998764 44566765553333222 1 2568899999888777777889999999998
Q ss_pred CCCCCCCCHHHHHHHHHcC----CCCE-----EEEEEEcC--CCccccccCHHHHHHHHHHcCCEEEEeccccccccccC
Q 001579 709 TDAKGNINIEELRKAAEAN----RDNL-----STLMVTYP--STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT 777 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~----~~~t-----aaV~vt~P--n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~ 777 (1050)
.+ |+++|++++++. .+++ +.+++..+ |..|.+. ++++|.++|+++|+++++|+++..+..|..
T Consensus 214 ~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~-~l~~I~~la~~~~~~livDEa~s~g~~G~~ 287 (489)
T PLN02483 214 HN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELC-KLPEIVAVCKKYKAYVYLDEAHSIGAVGKT 287 (489)
T ss_pred CC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCccc-CHHHHHHHHHHcCCEEEEECcCccCccCCC
Confidence 63 678887776531 1232 55555554 4578887 899999999999999999999753222210
Q ss_pred ---CC---C--cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhh
Q 001579 778 ---SP---G--YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1050)
Q Consensus 778 ---~p---g--~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~ 849 (1050)
.. + ..+.||++.+++|+|+. .| |++++++++++.+.....+ ...+...+ +
T Consensus 288 G~g~~~~~~v~~~~~dI~~~SfSKs~g~------~G-G~i~~~~~li~~l~~~~~~-----------~~~~~~~~-p--- 345 (489)
T PLN02483 288 GRGVCELLGVDPADVDIMMGTFTKSFGS------CG-GYIAGSKELIQYLKRTCPA-----------HLYATSMS-P--- 345 (489)
T ss_pred CCchHHhcCCCcccCcEEEEecchhccc------Cc-eEEEcCHHHHHHHHHhCcc-----------ccccCCcC-H---
Confidence 00 1 13579999999999963 22 7888887766654211000 00001111 1
Q ss_pred HHHHHHHHHHHHHH-Chhh---HHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHH
Q 001579 850 ALILPISYTYIAMM-GSKG---LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 924 (1050)
Q Consensus 850 ~~~~~~a~a~l~~l-G~eG---l~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~va 924 (1050)
..+..+.+.+..+ +.+| ..+..++..++++++.+.|+++ +.+. ....++... +.+ .. .....+++
T Consensus 346 -~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v~-~~~~sp~~~-l~l-~~------~~~~~~~~ 415 (489)
T PLN02483 346 -PAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEVL-GDNDSPVMP-IML-YN------PAKIPAFS 415 (489)
T ss_pred -HHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCccc-CCCCCCEEE-EEE-CC------HHHHHHHH
Confidence 1111122233322 2221 2334556778899999999886 4432 111123221 111 11 12356899
Q ss_pred HHHHHCCcccCCCCCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 925 KRLMDYGFHGPTMSWPV----PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 925 krL~d~Gi~~~~~~~pv----~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
++|.++||.+....||. .+.+||+++..+|+||||+++++|.++.+++
T Consensus 416 ~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 416 RECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred HHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999876555641 2679999999999999999999999987653
No 174
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.72 E-value=3.6e-15 Score=176.57 Aligned_cols=339 Identities=16% Similarity=0.199 Sum_probs=210.9
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llair 669 (1050)
..+|++..++..++..+. ....+....-+. .+...++.+.|++++. ++.+ ++.+||++++++++..+|
T Consensus 61 ~~lGh~~p~v~~ai~~ql-~~l~~~~~~~~~--------~~~~~~la~~L~~~~p~~~~~v-~f~~sGseAve~AlklAr 130 (445)
T PRK09221 61 CNAGHGRPEIVEAVARQA-ATLDYAPAFQMG--------HPLAFELAERLAELAPGGLDHV-FFTNSGSESVDTALKIAL 130 (445)
T ss_pred ccCCCCCHHHHHHHHHHH-HhccCccccccC--------CHHHHHHHHHHHHhCCCCCCEE-EEeCCcHHHHHHHHHHHH
Confidence 467888877766655552 221111100010 1234478888999874 4444 567899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC------------CEEEEEcCCC---C---C-------CCCHHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDA---K---G-------NINIEELRKA 723 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G------------~~vv~V~~d~---~---g-------~iD~e~L~~~ 723 (1050)
.|...+|.++|.+|| ...++||....+....| ..+..++... . + ..++++|++.
T Consensus 131 ~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 210 (445)
T PRK09221 131 AYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERL 210 (445)
T ss_pred HHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHH
Confidence 887666644455666 57789997654432211 1133444321 0 0 0124688888
Q ss_pred HHcCC-CCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc------c--CcEEEeC
Q 001579 724 AEANR-DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLN 790 (1050)
Q Consensus 724 i~~~~-~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~------G--aDv~~~~ 790 (1050)
+++++ +++++|+++.. +..|++.+ .+++|+++|+++|+++++|+++ .|+.+.|.+ | +|++++
T Consensus 211 i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~----tG~GRtG~~~~~~~~gv~PDi~~~- 285 (445)
T PRK09221 211 VALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVI----TGFGRLGAAFAAERFGVTPDIITF- 285 (445)
T ss_pred HHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh----hCCCcCchhhHHHhcCCCCCEEEe-
Confidence 87653 68888888754 45677762 2999999999999999999874 456665543 3 588876
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ +|...+|.+++++++...+...... . .... ..+++.|+++.++++.+.+..+..+++.
T Consensus 286 -gK~l~----gG~~Pi~av~~~~~i~~~~~~~~~~-~---------~~~~-~~~T~~~~pl~~aaa~a~L~~i~~~~l~- 348 (445)
T PRK09221 286 -AKGLT----NGAIPMGAVIASDEIYDAFMQGPEY-A---------IEFF-HGYTYSAHPVACAAGLATLDIYREEDLF- 348 (445)
T ss_pred -ccccc----cCcccceeeEEcHHHHHhhccCccc-c---------cccc-cccCCCcCHHHHHHHHHHHHHHHhccHH-
Confidence 48773 4434467788887776654211000 0 0000 0112345667777788888888766654
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEE
Q 001579 871 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lr 946 (1050)
++..++.++|+++|+++ ++.+ ..|. | .+ ..+.+.+...........+.++|.++|+.+... .+.||
T Consensus 349 --~~~~~~g~~l~~~l~~l~~~~~v~~vrg~-G-l~--~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~----~~~lr 418 (445)
T PRK09221 349 --ERAAELAPYFEDAVHSLKGLPHVIDIRNI-G-LV--AGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT----GDTIA 418 (445)
T ss_pred --HHHHHHHHHHHHHHHhhccCCCEEEEecC-c-eE--EEEEEecccccccchHHHHHHHHHHCCeEEeec----CCEEE
Confidence 45567888999988775 2321 1121 2 11 122222110001123467889999999987532 46899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 947 IEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 947 I~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
++|+..+|++|||+++++|.+++.++
T Consensus 419 ~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 419 LSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EECCccCCHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998764
No 175
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.72 E-value=1e-15 Score=177.79 Aligned_cols=291 Identities=15% Similarity=0.151 Sum_probs=186.7
Q ss_pred ccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V 707 (1050)
+|+.....++++++++++|.+. .+..++|+++.++ +++.+. .++++|+++...|+.+...+.+.|.+++.+
T Consensus 80 ~g~~~~~~~l~~~la~~~~~~~-~i~~~~g~~~~~~---~l~~~~-----~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~ 150 (385)
T PRK05958 80 TGNSPAHEALEEELAEWFGAER-ALLFSSGYAANLA---VLTALA-----GKGDLIVSDKLNHASLIDGARLSRARVRRY 150 (385)
T ss_pred cCCcHHHHHHHHHHHHHhCCCc-EEEECcHHHHHHH---HHHHhC-----CCCCEEEEeCccCHHHHHHHHhcCCceEEe
Confidence 4555677889999999999654 3556677765433 333331 246789999988887777788899999988
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccC---CC----
Q 001579 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT---SP---- 779 (1050)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~---~p---- 779 (1050)
+. .|+++++++++..+++++++++..+ +.+|... ++++|+++|+++|+++++|+++..+..+.. .+
T Consensus 151 ~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~-~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~ 224 (385)
T PRK05958 151 PH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLA-PLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAG 224 (385)
T ss_pred CC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcC-CHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhC
Confidence 75 4899999999743234666666656 4578887 799999999999999999999743321100 00
Q ss_pred -CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHH
Q 001579 780 -GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1050)
Q Consensus 780 -g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1050)
....-+++..++||+|+. +| |++..++++.+.+.... +....+. .. +...++++++
T Consensus 225 ~~~~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~~-----------~~~~~~~-~~----~~~~~aa~~a 281 (385)
T PRK05958 225 LAGEPDVILVGTLGKALGS------SG-AAVLGSETLIDYLINRA-----------RPFIFTT-AL----PPAQAAAARA 281 (385)
T ss_pred CCCCCceEEEEechhhccc------CC-cEEEcCHHHHHHHHHhC-----------ccceecC-CC----CHHHHHHHHH
Confidence 011234777889999853 23 67777766554331000 0000000 01 1122233444
Q ss_pred HHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 001579 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1050)
Q Consensus 859 ~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~ 937 (1050)
.+..+... .+..++...+++++.+.|++. +++. . +.+.+ +.+.++. ..+..++.++|.++||.+...
T Consensus 282 al~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~-~-~~~~~---~~~~~~~-----~~~~~~~~~~l~~~gI~v~~~ 349 (385)
T PRK05958 282 ALRILRRE--PERRERLAALIARLRAGLRALGFQLM-D-SQSAI---QPLIVGD-----NERALALAAALQEQGFWVGAI 349 (385)
T ss_pred HHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC-C-CCCCE---EEEEeCC-----HHHHHHHHHHHHHCCceEecc
Confidence 45544322 345566778888999999875 4432 1 12222 3344331 134578999999999998543
Q ss_pred CCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 938 SWP----VPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 938 ~~p----v~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
.++ -.+.+||++...++++|+|+++++|.++
T Consensus 350 ~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 350 RPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred cCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 222 1358999999889999999999999875
No 176
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.71 E-value=1.5e-16 Score=173.95 Aligned_cols=311 Identities=16% Similarity=0.183 Sum_probs=214.1
Q ss_pred cccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHH
Q 001579 167 YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAM 246 (1050)
Q Consensus 167 ~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~l 246 (1050)
.++|+|++-||.+..++-+ -+++.+-... .-+-..|.-+-..++++.+|+|-+-|. +.++.+.--|..+.+.
T Consensus 178 SNDYLgms~Hp~V~~A~~~--tl~~hG~GAG----GTRNIsG~s~~hv~LE~eLA~LHqK~a--ALlFsSCfVANDstLf 249 (570)
T KOG1360|consen 178 SNDYLGMSRHPEVLDAMHD--TLDRHGAGAG----GTRNISGHSKHHVRLEAELADLHQKEA--ALLFSSCFVANDSTLF 249 (570)
T ss_pred cCccccccCChHHHHHHHH--HHHHcCCCcC----CccccCCCCchhhhHHHHHHHHhcCcc--eeeeeeeeeccchHHH
Confidence 4679999998876666653 3344332222 234456777788889999999999887 5556655555555553
Q ss_pred HhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhhc-c---CCC-eeEEEEEcC-CCCeeEccHHHHHH
Q 001579 247 CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY-K---SGD-VCGVLVQYP-GTEGEVLDYGDFIK 320 (1050)
Q Consensus 247 a~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~-l---~~~-t~~V~v~~p-n~~G~i~di~~I~~ 320 (1050)
.+. ++-++-+|+.+..+|.|.+..++. +.--.+-+++.|+++|++ + ++. .+.|.+... ++.|.|.||++|++
T Consensus 250 tLa-k~lpgcei~SD~gNHASMI~GIrn-s~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcD 327 (570)
T KOG1360|consen 250 TLA-KKLPGCEIFSDEGNHASMIQGIRN-SRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCD 327 (570)
T ss_pred HHH-HHCCCcEEeccccchHHHHHHhhh-cCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHH
Confidence 221 112788999999999999999985 334467888899988876 3 333 466666554 89999999999999
Q ss_pred HHHhCCcEEEEEecCccccCCCCCCc-----c----cceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeE
Q 001579 321 NAHANGVKVVMATDLLALTILKPPGE-----L----GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGV 390 (1050)
Q Consensus 321 ~ah~~galliV~a~~~alg~l~~pg~-----~----GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~ 390 (1050)
++|++|++..+ ++.++.|+..+-|. - .+||+.|+. |.||. .| ||++.+..+++-+.
T Consensus 328 vah~yGAiTFl-DEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc---VG----GYIAat~~LvDmiR------ 393 (570)
T KOG1360|consen 328 VAHKYGAITFL-DEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC---VG----GYIAATRKLVDMIR------ 393 (570)
T ss_pred HHHHhCceeee-ehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc---cc----ceehhhhhHHHHHH------
Confidence 99999999999 46778887765432 2 369999996 99974 34 58988887765431
Q ss_pred eecCCCCcceEEecccccccccccccCCCccchhH----HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001579 391 SIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA----LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1050)
Q Consensus 391 s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~----l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~ 466 (1050)
--|-.+|+|++. +.+...++- -+-..||. .+.+...++..|+++.|.++|
T Consensus 394 -----------------------SyAaGFIFTTSLPP~vl~GAleaVr-~lk~~eg~-~lR~~hqrnv~~~kq~l~~~G- 447 (570)
T KOG1360|consen 394 -----------------------SYAAGFIFTTSLPPMVLAGALEAVR-ILKSEEGR-VLRRQHQRNVKYVKQLLMELG- 447 (570)
T ss_pred -----------------------HhcCceEEecCCChHHHHhHHHHHH-HHhhhhhH-HHHHHHHHHHHHHHHHHHHcC-
Confidence 112223344333 333333331 12233453 455666788999999999999
Q ss_pred EEEcCCCCccEEEEecCC---HHHHHHHHH-HcCceeeee-----c--CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 467 VEVQGLPFFDTVKVKCAD---AHAIASAAY-KIEMNLRVV-----D--SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 467 ~~l~~~~~~~~v~i~~~~---~~~i~~~L~-~~GI~~~~~-----~--~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+.++..| .+.+-+.+.+ +.++.+.|. ++||++..+ . ...+||.+|+.+|.+-++.|+++|.
T Consensus 448 iPVi~~p-SHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~ 519 (570)
T KOG1360|consen 448 IPVIPNP-SHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALL 519 (570)
T ss_pred CcccCCC-cceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHH
Confidence 8877422 2344455444 677888877 479988543 1 3679999999999999999999885
No 177
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.71 E-value=1.8e-15 Score=176.06 Aligned_cols=297 Identities=15% Similarity=0.224 Sum_probs=185.7
Q ss_pred HHHHHHHHHHhhCCCeeeec-cCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC-
Q 001579 634 FNNLGEWLCTITGFDSFSLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~-~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~- 711 (1050)
..++++++++++|.+...+. .+++++|.. ++++.+. .+++.|++++..+......++..|.+++.++++.
T Consensus 68 ~~~lr~~ia~~l~~~~~~v~~~~g~t~al~---~~~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~ 139 (380)
T PRK06225 68 FPELRELILKDLGLDDDEALITAGATESLY---LVMRAFL-----SPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSE 139 (380)
T ss_pred hHHHHHHHHHhcCCCCCcEEEeCCHHHHHH---HHHHHhc-----CCCCEEEEcCCCCcchHHHHHHhCceEEeeccccc
Confidence 45688899999998764433 444554443 3333321 2457789988777666666788999999998743
Q ss_pred --CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--cC
Q 001579 712 --KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--GA 784 (1050)
Q Consensus 712 --~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--Ga 784 (1050)
++.+|+++++++++ +++++|++++|+ .+|.+. +++++|+++|+++|+++++|+++..-..+....... ..
T Consensus 140 ~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 216 (380)
T PRK06225 140 ECNYKLTPELVKENMD---ENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEH 216 (380)
T ss_pred cCCccCCHHHHHhhcC---CCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCC
Confidence 25799999999986 788999999995 688763 369999999999999999998742100111111111 23
Q ss_pred cEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
.+++.+++|+|+. .|.++|++++++++.+.+.... ....+.+...+ .++.+.+.. .
T Consensus 217 ~i~~~s~SK~~g~----~G~RiG~i~~~~~l~~~~~~~~---------------~~~~~~~~~~~----~~a~~~l~~-~ 272 (380)
T PRK06225 217 TVTSYSFSKIFGM----AGLRIGAVVATPDLIEVVKSIV---------------INDLGTNVIAQ----EAAIAGLKV-K 272 (380)
T ss_pred EEEEeechhhcCC----ccceeEEEecCHHHHHHHHHHH---------------hcccCCCHHHH----HHHHHHHhc-c
Confidence 4667788899853 3677899999877665442110 00111111111 112222222 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CC-
Q 001579 865 SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WP- 940 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~-~p- 940 (1050)
.+-+++..+....+.+++.+.|+++ ..+....+.+. -+.+++.+ .+++..+++++|.++||.+.... |.
T Consensus 273 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~---~~~~~~~~----~~~~~~~l~~~l~~~gi~v~~g~~~~~ 345 (380)
T PRK06225 273 DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGN---MMVIDISE----AGIDPEDLVEYLLERKIFVRQGTYTSK 345 (380)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCe---EEEEEccc----ccCCHHHHHHHHHHCCEEEcCCcccCc
Confidence 1223333343445567777888764 22211111222 24556542 23577899999999999865332 11
Q ss_pred --CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 941 --VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 941 --v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
-.+.+|+++. .+++|+++++++|+++++++++
T Consensus 346 ~~~~~~iR~s~~--~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 346 RFGDRYIRVSFS--IPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred CCCCceEEEEeC--CCHHHHHHHHHHHHHHHHHhhc
Confidence 1358999975 4789999999999999988764
No 178
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.71 E-value=3.2e-15 Score=175.65 Aligned_cols=322 Identities=17% Similarity=0.204 Sum_probs=204.7
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
..||++..++..++..+.... .+. ...+. .+...++.+.|+++++.+.+ ++.+||+++++++++++|.|
T Consensus 51 ~~lGh~~p~v~~A~~~~~~~~-~~~-~~~~~--------~~~~~~la~~l~~~~~~~~v-~~~~sGseA~e~Alk~ar~~ 119 (406)
T PRK12381 51 NALGHAHPALREALNEQASKF-WHT-GNGYT--------NEPVLRLAKKLIDATFADRV-FFCNSGAEANEAALKLARKY 119 (406)
T ss_pred ccCCCCCHHHHHHHHHHHhhc-ccc-cCccC--------CHHHHHHHHHHHhhCCCCeE-EEcCCcHHHHHHHHHHHHHH
Confidence 367888777666655542111 011 11121 12345788999999887754 67789999999999999988
Q ss_pred HHhcCCCCCCEEE-EcCCCCCccHHHHHhCCCE------------EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEc
Q 001579 672 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY 738 (1050)
Q Consensus 672 ~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~~------------vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~ 738 (1050)
...++..+|++|+ ...++||.........|.. ++.++. .|+++|++.++ +++++|+++.
T Consensus 120 ~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~---~~~aaviiEP 191 (406)
T PRK12381 120 AHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY-----NDLNSASALID---DQTCAVIVEP 191 (406)
T ss_pred HhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC-----CCHHHHHHhcc---CCeeEEEEeC
Confidence 6544433455565 5678999876554443321 233332 48999999996 6899998863
Q ss_pred CC-Cccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCc------c--cCcEEEeCCccccccCCCCCCCcc
Q 001579 739 PS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGGPGM 806 (1050)
Q Consensus 739 Pn-~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~------~--GaDv~~~~~hKtf~~P~g~GGPg~ 806 (1050)
-+ +.|++. +.+++|.++|++||+++++|.++ .|+.+.|. + .+|++++ .|.++ ||..+
T Consensus 192 v~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~----tG~gr~G~~~~~~~~~v~pDi~t~--sK~l~-----gG~~i 260 (406)
T PRK12381 192 IQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ----TGVGRTGELYAYMHYGVTPDVLTT--AKALG-----GGFPI 260 (406)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh----hCCCCCcchhhhHhhCCCCCEEEe--hhhhh-----CCCce
Confidence 23 345542 47999999999999999999875 33333332 2 3577554 58774 55778
Q ss_pred eeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHH
Q 001579 807 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1050)
Q Consensus 807 G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L 886 (1050)
|.+++++++.+.+..... ....+ +++..++++.+.+..+..+.+ .++..++.+++.++|
T Consensus 261 g~~~~~~~~~~~~~~~~~--------------~~t~~----~~pl~~aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~L 319 (406)
T PRK12381 261 GAMLTTEKCASVMTVGTH--------------GTTYG----GNPLASAVAGKVLELINTPEM---LNGVKQRHDWFVERL 319 (406)
T ss_pred EEEEEcHHHHhhcCCCCC--------------CCCCC----CCHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHHHH
Confidence 999998887765531100 01112 244445556666666644433 344556788899988
Q ss_pred hcc---CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHH
Q 001579 887 EKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRY 961 (1050)
Q Consensus 887 ~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~f 961 (1050)
+++ +.+. ..| .| .+ +.+.+.+ ........+.+.|.++|+.+.... ++.+|++|+..+|++|||++
T Consensus 320 ~~l~~~~~~~~~vrg-~G-l~--~~~~l~~---~~~~~~~~~~~~l~~~Gv~v~~~g---~~~lRl~p~~~~t~~~i~~~ 389 (406)
T PRK12381 320 NTINARYGLFSEIRG-LG-LL--IGCVLNA---EYAGKAKQISQEAAKAGVMVLIAG---PNVVRFAPALNISEEEITTG 389 (406)
T ss_pred HHHHhhCCCEEEEec-Ce-EE--EEEEecC---chhhHHHHHHHHHHHCCcEEeeCC---CCEEEEeCCccCCHHHHHHH
Confidence 775 3321 111 12 11 2233321 001135688899999999974322 36899999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 001579 962 CDALISIREEIAQ 974 (1050)
Q Consensus 962 v~aL~~i~~ei~~ 974 (1050)
++.|.+++.++..
T Consensus 390 ~~~l~~~l~~~~~ 402 (406)
T PRK12381 390 LDRFARACERFVS 402 (406)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887644
No 179
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.71 E-value=3.2e-15 Score=170.31 Aligned_cols=305 Identities=18% Similarity=0.179 Sum_probs=197.0
Q ss_pred cCCCCCCCCCcHHHHHHHHh--CCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCC------CcceeEecchHHHHH
Q 001579 171 IGMGYYNTHVPPVILRNIME--NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP------MSNASLLDEGTAAAE 242 (1050)
Q Consensus 171 lG~g~~~~~~p~~i~~~i~~--~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~------~anasl~d~~Taa~e 242 (1050)
+|.|.||...++.+...+.. ++.....|.+. +| +.++++.++++++.. ..++.+++++|++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~ 73 (350)
T cd00609 3 LSIGEPDFPPPPEVLEALAAAALRAGLLGYYPD-----PG----LPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALS 73 (350)
T ss_pred CCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCC-----CC----cHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 35677777766666544442 22222333322 22 233445566666544 557888899998887
Q ss_pred HHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch----------hhhc-cCCCeeEEEEEcC-CCCe
Q 001579 243 AMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK----------DIDY-KSGDVCGVLVQYP-GTEG 310 (1050)
Q Consensus 243 A~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~----------~l~~-l~~~t~~V~v~~p-n~~G 310 (1050)
+++.++. +++++|++++..|+++...++. .|++++.++.+ .++. .++++++|++++| |.+|
T Consensus 74 ~~~~~~~---~~g~~vl~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG 146 (350)
T cd00609 74 LLLRALL---NPGDEVLVPDPTYPGYEAAARL----AGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTG 146 (350)
T ss_pred HHHHHhC---CCCCEEEEcCCCchhHHHHHHH----CCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCC
Confidence 7666542 3689999999999999888753 46777777542 2222 5678999999988 6799
Q ss_pred eEccHHHH---HHHHHhCCcEEEEEecCccccC--------CCCCCcccceEEEecC-ccccccCCCCCcceEEEEEeh-
Q 001579 311 EVLDYGDF---IKNAHANGVKVVMATDLLALTI--------LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ- 377 (1050)
Q Consensus 311 ~i~di~~I---~~~ah~~galliV~a~~~alg~--------l~~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~- 377 (1050)
.+.|++++ .++||++|++++++. .++.+. +...+..+.|++++|. |.|+ .+|+.+|++++++
T Consensus 147 ~~~~~~~l~~l~~~~~~~~~~~ivD~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~----~~g~~~G~i~~~~~ 221 (350)
T cd00609 147 AVLSEEELEELAELAKKHGILIISDE-AYAELVYDGEPPPALALLDAYERVIVLRSFSKTFG----LPGLRIGYLIAPPE 221 (350)
T ss_pred cccCHHHHHHHHHHHHhCCeEEEEec-chhhceeCCcccccccCcCccCcEEEEeecccccC----CcccceEEEecCHH
Confidence 99876555 589999999999943 222211 1224577899999998 7775 2456789999998
Q ss_pred hhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHH
Q 001579 378 EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTF 457 (1050)
Q Consensus 378 ~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l 457 (1050)
++.+.+... .+ ..+++.++ ....++.+++ . .+.++++++.+++.++++++
T Consensus 222 ~~~~~~~~~------------------------~~--~~~~~~~~-~~~~~~~~~l--~-~~~~~~~~~~~~~~~~~~~l 271 (350)
T cd00609 222 ELLERLKKL------------------------LP--YTTSGPST-LSQAAAAAAL--D-DGEEHLEELRERYRRRRDAL 271 (350)
T ss_pred HHHHHHHHH------------------------HH--hcccCCCh-HHHHHHHHHH--h-CcHHHHHHHHHHHHHHHHHH
Confidence 676655210 00 00112211 2222222221 1 11168899999999999999
Q ss_pred HHHHhcCCCEEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 458 ALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 458 ~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~i~~~L~~~GI~~~~~------~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
.+.|++.+...+........+.+.++. ...+.+.|.++||.+... .+..+|++++.. ++||++++++|+
T Consensus 272 ~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 272 LEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred HHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 999999862332222222234445443 556777777889988654 357899999988 999999999985
No 180
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.71 E-value=2.4e-15 Score=174.92 Aligned_cols=300 Identities=14% Similarity=0.139 Sum_probs=190.5
Q ss_pred cccHHHHHHHHHHHHHHhhC--CCeeeecc-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 627 AQGYQEMFNNLGEWLCTITG--FDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G--~d~~~l~~-~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
.+|..++.+.+.+++.+.+| .+...+.. +++++|.. ++++.+. .+++.|+++...|..+...+...|++
T Consensus 60 ~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~---~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 131 (382)
T PRK06108 60 NLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALM---LAAQALV-----GPGDEVVAVTPLWPNLVAAPKILGAR 131 (382)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHH---HHHHHhc-----CCCCEEEEeCCCccchHHHHHHCCCE
Confidence 36777888888888888888 44334333 44444442 2333221 24578999988887777778899999
Q ss_pred EEEEcCCCC---CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccccc--
Q 001579 704 IVSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVG-- 775 (1050)
Q Consensus 704 vv~V~~d~~---g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~g-- 775 (1050)
++.++.+.+ +.+|+++|++.++ +++++|++++| |.+|.+. +++++|+++|+++|+++++|.++.....+
T Consensus 132 ~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~ 208 (382)
T PRK06108 132 VVCVPLDFGGGGWTLDLDRLLAAIT---PRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPG 208 (382)
T ss_pred EEEeeCCCCCCCccCCHHHHHHhcC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCC
Confidence 999998743 4689999999986 67899999999 5788764 35899999999999999999885321111
Q ss_pred cCCCC--c----ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhh
Q 001579 776 LTSPG--Y----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1050)
Q Consensus 776 l~~pg--~----~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~ 849 (1050)
-..|. . ..-.+++.+++|+|+. .|.++|++++++++...+... .. ....+++ ...+
T Consensus 209 ~~~~~~~~~~~~~~~~i~~~S~SK~~g~----~G~RiG~~~~~~~~~~~~~~~-~~-----------~~~~~~~--~~~q 270 (382)
T PRK06108 209 GRAPSFLDIAEPDDRIIFVNSFSKNWAM----TGWRLGWLVAPPALGQVLEKL-IE-----------YNTSCVA--QFVQ 270 (382)
T ss_pred CCCCCHhhcCCCcCCEEEEeechhhccC----cccceeeeeCCHHHHHHHHHH-HH-----------hcccCCC--hHHH
Confidence 00111 1 1234778889999864 367899999987766543210 00 0011111 1122
Q ss_pred HHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-
Q 001579 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 928 (1050)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~- 928 (1050)
.++...+ ..+.+.+++..++...+.+++.+.|+++..+.+..+.+..+ +.+++++ ..+..+++++|.
T Consensus 271 ----~a~~~~l-~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~--~~~~l~~-----~~~~~~~~~~ll~ 338 (382)
T PRK06108 271 ----RAAVAAL-DEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMY--AFFRIPG-----VTDSLALAKRLVD 338 (382)
T ss_pred ----HHHHHHH-hCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEE--EEEeCCC-----CCCHHHHHHHHHH
Confidence 1122222 22334456666667777888989887652222212222221 3455542 246778999885
Q ss_pred HCCccc-CCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 929 DYGFHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 929 d~Gi~~-~~~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
++||.+ +...|. ..+.+||+++. +.+++++.++.|++++
T Consensus 339 ~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 339 EAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFL 380 (382)
T ss_pred hCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 689986 333342 25789999987 7888888888887654
No 181
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.71 E-value=2.7e-15 Score=177.58 Aligned_cols=339 Identities=18% Similarity=0.198 Sum_probs=207.9
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llair 669 (1050)
..||++...+..++..+. ..-.+.. .++- ..+...++.+.|++++. ++.+ ++.+||++++++++..+|
T Consensus 58 ~~lGh~~p~v~~ai~~ql-~~l~~~~--~~~~------~~~~~~~la~~l~~~~p~~~~~v-~f~~sGseA~e~AlklAr 127 (442)
T PRK13360 58 VNAGHGRPEIVEAVRAQA-GELDYAP--AFQM------GHPKAFELANRIAEIAPGGLNHV-FFTNSGSESVDTALKIAL 127 (442)
T ss_pred hccCCCCHHHHHHHHHHH-HhCCCcc--cCCc------CCHHHHHHHHHHHHhCCCCCCEE-EEeCCcHHHHHHHHHHHH
Confidence 467888887777766553 2111111 1100 01234478888999873 4544 668999999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC------------CEEEEEcCCCC-----C--------CCCHHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAK-----G--------NINIEELRKA 723 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G------------~~vv~V~~d~~-----g--------~iD~e~L~~~ 723 (1050)
.|...+|.++|++|| ...++||....+....| ..+..+|...+ . .-++++|++.
T Consensus 128 ~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~ 207 (442)
T PRK13360 128 AYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERL 207 (442)
T ss_pred HHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHH
Confidence 886555543455666 57789997654432211 12344544211 0 0125688888
Q ss_pred HHcC-CCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeC
Q 001579 724 AEAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 790 (1050)
Q Consensus 724 i~~~-~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~ 790 (1050)
+..+ .+++++|+++.. +..|++.+ .+++|.++|+++|+++++|.++ .|+.+.|.+ -+|++++
T Consensus 208 l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~----tG~GrtG~~~a~~~~gv~PDivt~- 282 (442)
T PRK13360 208 VTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVI----TGFGRLGAPFAAQYFGVTPDLLTC- 282 (442)
T ss_pred HHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh----hCCCCCccchhhhhcCCCCceeee-
Confidence 8654 367888887754 34677752 2999999999999999999874 455555543 2588766
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ +|.-.+|.+.+++++...+...... . .... ..+++.|+++.++++.+.|..+.++++.+
T Consensus 283 -gK~l~----gG~~P~gav~~~~~i~~~~~~~~~~--~------~~~~---~~~T~~g~pl~~aaa~a~L~~l~~~~l~~ 346 (442)
T PRK13360 283 -AKGLT----NGAIPMGAVFVSSEIHDAFMQGPEA--G------IEFF---HGYTYSGHPLACAAALATLDLYEREGLLT 346 (442)
T ss_pred -eeccc----cCccceEEEEEcHHHHHHhhcCCcc--c------cccc---cCCCCCCCHHHHHHHHHHHHHHHhCCHHH
Confidence 58773 3322256677787776544211000 0 0000 01123456777888888898887776554
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEE
Q 001579 871 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lr 946 (1050)
+..++.+||.++|+++ ++.+ ..|. |.. . .+.+.+..........++.++|.++|+.+... .+.+|
T Consensus 347 ---~~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl~-~--~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~----~~~lr 415 (442)
T PRK13360 347 ---RAARLAPYWEDALHSLRDAPHVIDIRNL-GLV-G--AVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT----GDILA 415 (442)
T ss_pred ---HHHHHHHHHHHHHHHhhcCCCeeeeecc-ceE-E--EEEEecCCCCcchhHHHHHHHHHHCCcEEEec----CCEEE
Confidence 4456778888888764 3221 1121 221 1 12221111001113467888999999987532 36899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 947 IEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 947 I~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
++|+..+|++|||+++++|.++++++
T Consensus 416 ~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 416 LSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988653
No 182
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.71 E-value=6e-15 Score=176.72 Aligned_cols=342 Identities=14% Similarity=0.170 Sum_probs=209.9
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhh-CCCe-eeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT-GFDS-FSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~-G~d~-~~l~~~sGa~ge~a~Llair 669 (1050)
..||++.+++..++..+.... .+ ++++. .+..+...++.+.|++++ +.+. -.++.++|++++++++.++|
T Consensus 101 ~~lGh~hp~v~~Av~~ql~~~-~~--~~~~~-----~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr 172 (504)
T PLN02760 101 TALGGSEPRLVAAATEQLNKL-PF--YHSFW-----NRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVW 172 (504)
T ss_pred cccCCCCHHHHHHHHHHHhhc-cc--eeccc-----ccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHH
Confidence 467888887777766653221 11 11110 112234567888888885 3221 23667899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCCE------------EEEEcCCC-------CC------CCCHHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDA-------KG------NINIEELRKA 723 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~~------------vv~V~~d~-------~g------~iD~e~L~~~ 723 (1050)
.|...+|.++|++|| ...++||....+..+.|.+ +..++++. .. ....++|+++
T Consensus 173 ~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~ 252 (504)
T PLN02760 173 YYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENL 252 (504)
T ss_pred HHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHH
Confidence 887666654455555 5678999865554433321 22333211 00 0123567777
Q ss_pred HHc-CCCCEEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeC
Q 001579 724 AEA-NRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 790 (1050)
Q Consensus 724 i~~-~~~~taaV~vt~P-n~~Gv~~~d---i~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~ 790 (1050)
+.+ +.+++++|+++.. +..|++.++ +++|+++|++||+++|+|.+ +.||.+.|.+ -+|++++
T Consensus 253 l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV----~TGfGRtG~~~a~e~~gv~PDivtl- 327 (504)
T PLN02760 253 ILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEV----ICAFGRLGTMFGCDKYNIKPDLVSL- 327 (504)
T ss_pred HHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecch----hhCCcccchhhHHHhcCCCCcEEEe-
Confidence 753 3467888887653 445777522 99999999999999999986 5677666643 2688877
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ +|.-.+|.+++++++.+.+.... . ..... ...+++.|+++.++++.+.|..+.++++.
T Consensus 328 -gK~lg----gG~~PigAv~~~~~i~d~~~~~~--~--------~~~~~-~h~~T~~gnPl~~Aaala~Le~i~~~~l~- 390 (504)
T PLN02760 328 -AKALS----SAYMPIGAVLVSPEISDVIHSQS--N--------KLGSF-AHGFTYSGHPVSCAVALEALKIYKERNIP- 390 (504)
T ss_pred -ccccc----CCccccceEeecHHHHhhhhccc--c--------cccCc-ccCCCCCCCHHHHHHHHHHHHHHHhCCHH-
Confidence 58774 33323556778877766542110 0 00000 01112446777888888999888776554
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEeccccccc-CCC-----CHHHHHHHHHHCCcccCCCCCC
Q 001579 871 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNT-AGI-----EPEDVAKRLMDYGFHGPTMSWP 940 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~~-~g~-----~~~~vakrL~d~Gi~~~~~~~p 940 (1050)
++...+.++|.++|+++ ++++ ..|. |.. +-+.+..-+.. ... -...+.+.|.++|+.+...
T Consensus 391 --~~~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~---~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~--- 461 (504)
T PLN02760 391 --EHVNKIAPRFQDGIKAFSGSPIIGEIRGT-GLI---LGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA--- 461 (504)
T ss_pred --HHHHHHHHHHHHHHHHHhcCCCeeeEEeC-ceE---EEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec---
Confidence 44556788888888764 3321 1221 222 12222110000 000 1346778889999987532
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 941 VPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 941 v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
.+.+|++|+..+|++|||+++++|.+++.++.
T Consensus 462 -g~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 462 -GDNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 36799999999999999999999999988763
No 183
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.71 E-value=3.7e-15 Score=174.19 Aligned_cols=320 Identities=19% Similarity=0.224 Sum_probs=201.6
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
..||++..++..++..+. .+-.+.+ ..+ +.+...++.+++++..+++.+ ++.+||++++++++.++|.|
T Consensus 48 ~~lGh~~p~v~~a~~~q~-~~~~~~~-~~~--------~~~~~~~la~~l~~~~~~~~v-~f~~SGseA~e~Aik~ar~~ 116 (395)
T PRK03715 48 NCLGHCNPGMVEALAAQA-EKLINPS-PAF--------YNEPMAKLAGLLTQHSCFDKV-FFANSGAEANEGAIKLARKW 116 (395)
T ss_pred ccCCCCCHHHHHHHHHHH-Hhccccc-ccc--------cCHHHHHHHHHHhhccCCCEE-EEeCCcHHHHHHHHHHHHHH
Confidence 357888776666655542 2111111 111 123455778888887777654 66789999999999998887
Q ss_pred HHhcCCCCCCEEE-EcCCCCCccHHHHHhCCCEEEE---EcCCCC----CCCCHHHHHHHHHcCCCCEEEEEEEcCC-Cc
Q 001579 672 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKIVS---VGTDAK----GNINIEELRKAAEANRDNLSTLMVTYPS-TH 742 (1050)
Q Consensus 672 ~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~~vv~---V~~d~~----g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~ 742 (1050)
... +.++|++|| ...++||..-.+....|..... .|.... ...|+++|+++++ +++++|+++... ..
T Consensus 117 ~~~-~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~aavi~Epv~~~g 192 (395)
T PRK03715 117 GRK-HKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT---DKTVAVMLEPVQGEG 192 (395)
T ss_pred hhc-cCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC---CCceEEEEeCCcCCC
Confidence 532 222344455 5678999877766554432111 111111 1258899999986 679999888653 45
Q ss_pred ccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCccccccCCCCCCCcceeeee
Q 001579 743 GVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1050)
Q Consensus 743 Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~hKtf~~P~g~GGPg~G~i~v 811 (1050)
|++.+ .+++|.++|+++|+++++|.++ .|+.+.|.+ .+|++++ .|.++ +|.| +|.+++
T Consensus 193 G~~~~~~~~l~~l~~l~~~~~~llI~DEv~----tG~GRtG~~~a~~~~gv~PDi~t~--gK~lg----~G~p-~~av~~ 261 (395)
T PRK03715 193 GVIPATREFMQQLRALTKQHGLLLIVDEVQ----TGCGRTGTLFAYELSGIEPDIMTL--GKGIG----GGVP-LAALLA 261 (395)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCCCcchhhHhhcCCCCceeee--hhhhh----CCcc-eEEEEE
Confidence 76642 2999999999999999999874 456666643 3688776 48874 3334 666777
Q ss_pred cccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--
Q 001579 812 KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-- 889 (1050)
Q Consensus 812 ~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-- 889 (1050)
++++..+.++. ..+++.|+++.++++.+.+..+.++++. ++..++.++|.++|+++
T Consensus 262 ~~~i~~~~~~~-------------------~~~T~~g~pl~~aaala~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~ 319 (395)
T PRK03715 262 KAEVAVFEAGD-------------------QGGTYNGNPLMTAVGVAVISQLLAPGFL---EGVRARGEYLKEKLLELSE 319 (395)
T ss_pred ccccccccCCC-------------------cCCCCCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHhh
Confidence 87775433321 0111234566777788888888665544 44557788999999864
Q ss_pred -CCee-ecCCCCccceeEEEecccccccCCCCHHHHHHHHHH---CCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHH
Q 001579 890 -YPIL-FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD---YGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDA 964 (1050)
Q Consensus 890 -~~v~-~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d---~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~a 964 (1050)
+.+. ..|. |. + +-+.+.. .....+.+.+.+ +|+.+.... +++||+.|+..+|++|||+++++
T Consensus 320 ~~~i~~vrG~-Gl-m--~~i~l~~------~~~~~~~~~~~~~~~~Gi~~~~~~---~~~lR~~p~l~~t~~ei~~~~~~ 386 (395)
T PRK03715 320 ERGLEGERGE-GL-L--RALLLGK------DIGPQIVEKARDMQPDGLLLNAPR---PNLLRFMPALNVTTEEIDQMIAM 386 (395)
T ss_pred cCCcCeEEcc-ee-E--EEEEecC------chHHHHHHHHHhccCCCEEEeecC---CCEEEEeCCcccCHHHHHHHHHH
Confidence 2221 1221 22 1 2233321 012344444444 498875332 37899999999999999999999
Q ss_pred HHHHHHHH
Q 001579 965 LISIREEI 972 (1050)
Q Consensus 965 L~~i~~ei 972 (1050)
|.+++.++
T Consensus 387 l~~~l~~~ 394 (395)
T PRK03715 387 LRSVLDKL 394 (395)
T ss_pred HHHHHHhh
Confidence 99988754
No 184
>PLN02263 serine decarboxylase
Probab=99.71 E-value=7.4e-15 Score=171.67 Aligned_cols=333 Identities=15% Similarity=0.102 Sum_probs=212.2
Q ss_pred HHHHHHHHHHhcCCCccccccCCCCCCCCC-cHHHH---HHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCC
Q 001579 151 SQMIEHMQKLASMNKVYKSFIGMGYYNTHV-PPVIL---RNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGL 226 (1050)
Q Consensus 151 ~e~~~~~~~la~~n~~~~~~lG~g~~~~~~-p~~i~---~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~ 226 (1050)
.++++.+.+.-..+... |+|- .++.-. +..+. ...+.|-+.-..+.||+- ++.+...+.-.++++|+|+
T Consensus 76 ~~~l~~~~~~~~~~~~~--~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~----~s~~~E~~Vi~wla~L~g~ 148 (470)
T PLN02263 76 ASVLARYRKTLVERTKH--HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGV----HSRQFEVGVLDWFARLWEI 148 (470)
T ss_pred HHHHHHHHHHHHhcccc--eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcch----hHHHHHHHHHHHHHHHhCC
Confidence 45566666665555433 4442 122223 33332 233345554344455532 3445666777899999999
Q ss_pred CCc--ceeEecchHHHHHHHHH-HhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-c
Q 001579 227 PMS--NASLLDEGTAAAEAMAM-CNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-K 294 (1050)
Q Consensus 227 ~~a--nasl~d~~Taa~eA~~l-a~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l 294 (1050)
+.. ...+++|||.+.--.++ |+... +...+++|+..|.|+.+.++. +|++++.++. ++|++ +
T Consensus 149 p~~~~~G~vtsGGTEaNL~Al~aARe~~--~~~vvy~S~~aH~Sv~KAa~l----lgi~~~~Vp~d~~g~mD~~aL~~aI 222 (470)
T PLN02263 149 EKNEYWGYITNCGTEGNLHGILVGREVF--PDGILYASRESHYSVFKAARM----YRMECVKVDTLVSGEIDCADFKAKL 222 (470)
T ss_pred CCCCCeEEEeCcHHHHHHHHHHHHHhhc--CCcEEEEcCCccHHHHHHHHh----cCCcceEeccCCCCcCcHHHHHHHH
Confidence 753 57788999854332222 22221 345789999999999998653 5777777764 35555 5
Q ss_pred CCC---eeEEEEEcC-CCCeeEccHHHHHHHHHhCCc-----EEEEEecCccccC--CCC-C---CcccceEEEecC-cc
Q 001579 295 SGD---VCGVLVQYP-GTEGEVLDYGDFIKNAHANGV-----KVVMATDLLALTI--LKP-P---GELGADIVVGSA-QR 358 (1050)
Q Consensus 295 ~~~---t~~V~v~~p-n~~G~i~di~~I~~~ah~~ga-----lliV~a~~~alg~--l~~-p---g~~GaDivvgs~-k~ 358 (1050)
.++ ...|+.+.+ +.+|.++||++|+++|+++|+ +++|++-+-+..+ +.. + +..+||-+..++ |+
T Consensus 223 ~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIsvD~HK~ 302 (470)
T PLN02263 223 LANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVSVSGHKF 302 (470)
T ss_pred HhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEEECCccc
Confidence 333 456667777 568999999999999999997 9999653322211 111 1 223599999999 66
Q ss_pred ccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHh
Q 001579 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH 438 (1050)
Q Consensus 359 ~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~ 438 (1050)
++.|++ +|++.+|+++.+.+.-. ..|-- .++..+ .++-+- ...+.+-+ -+.++
T Consensus 303 l~~P~~-----cgvll~R~~~~~~~~~~-----------~~Yl~---~~d~ti---~gSR~g---~~al~lW~--~L~~~ 355 (470)
T PLN02263 303 VGCPMP-----CGVQITRMEHINVLSSN-----------VEYLA---SRDATI---MGSRNG---HAPIFLWY--TLNRK 355 (470)
T ss_pred cCCCcC-----EEEEEEehhhHhhhccC-----------hHhhC---CCCCCc---CCCCCc---HHHHHHHH--HHHHh
Confidence 777875 56788887665433110 00100 000000 011111 11122222 25899
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCCHHHHHHHHHHcCceeeeecCCeEEEEeccCCCHH
Q 001579 439 GPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLE 518 (1050)
Q Consensus 439 g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~~~~i~~~L~~~GI~~~~~~~~~lris~~e~~t~e 518 (1050)
|.+|++++.+++.++|+++.++|++.| ++++..+...+|+|..+... ...+|+.+... +..++++++...|++
T Consensus 356 G~~G~~~~i~~~~~~A~~l~~~l~~~g-~~~~~~p~s~~V~f~~p~~~-----~~~~gW~L~~~-~~~~Hivvmphv~~~ 428 (470)
T PLN02263 356 GYRGFQKEVQKCLRNAHYLKDRLREAG-ISAMLNELSSTVVFERPKDE-----EFVRRWQLACQ-GNIAHVVVMPSVTIE 428 (470)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeCCCceEEEEecCchH-----HhhcceEEccC-CCcEEEEEcCCCCHH
Confidence 999999999999999999999999998 87765566667888765321 23579988763 457999999999999
Q ss_pred HHHHHHHHHhCC
Q 001579 519 DVDKLFIVFAGG 530 (1050)
Q Consensus 519 dId~lv~~l~~~ 530 (1050)
.||.|++.|...
T Consensus 429 ~id~fi~DL~~~ 440 (470)
T PLN02263 429 KLDYFLKELVEK 440 (470)
T ss_pred HHHHHHHHHHHH
Confidence 999999999753
No 185
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.71 E-value=2.1e-15 Score=176.13 Aligned_cols=315 Identities=15% Similarity=0.160 Sum_probs=196.6
Q ss_pred ccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHH
Q 001579 166 VYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMA 245 (1050)
Q Consensus 166 ~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~ 245 (1050)
.+.+|.+..+.++..|+.+.+.+.+.-.-+ .+....++..+|..+...++++.+++++|.+ +..++.+|+.+..+++
T Consensus 43 ~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~-~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~--~~i~~tsG~~a~~~~~ 119 (397)
T PRK06939 43 EVINFCANNYLGLANHPELIAAAKAALDSH-GFGMASVRFICGTQDLHKELEEKLAKFLGTE--DAILYSSCFDANGGLF 119 (397)
T ss_pred eEEEeeccCccccCCCHHHHHHHHHHHHHc-CCCCcccccccCCcHHHHHHHHHHHHHhCCC--cEEEEcChHHHHHHHH
Confidence 344554433344445555543333211100 1221233456787788888999999999976 3445555676666665
Q ss_pred HHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEc---Cchhhhc-cC----C--CeeEEEEEcC-CCCeeEcc
Q 001579 246 MCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS---DLKDIDY-KS----G--DVCGVLVQYP-GTEGEVLD 314 (1050)
Q Consensus 246 la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~---~~~~l~~-l~----~--~t~~V~v~~p-n~~G~i~d 314 (1050)
.++ + ++||+|++++..||++...++. .|.+++.+ +++++++ +. + +++.|++... |.+|.+.|
T Consensus 120 ~~l-~--~~gd~vi~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~ 192 (397)
T PRK06939 120 ETL-L--GKEDAIISDALNHASIIDGVRL----CKAKRYRYANNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP 192 (397)
T ss_pred HHh-C--CCCCEEEEEhhhhHHHHHHHHh----cCCceEEeCCCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC
Confidence 543 2 3899999999999999887653 23444444 5566654 43 3 5666665543 66899999
Q ss_pred HHHHHHHHHhCCcEEEEEecCccccCCCCCC---------cccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCC
Q 001579 315 YGDFIKNAHANGVKVVMATDLLALTILKPPG---------ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMP 384 (1050)
Q Consensus 315 i~~I~~~ah~~galliV~a~~~alg~l~~pg---------~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lp 384 (1050)
+++|.++|+++|++++++ +..+.+.+...+ ..++||+++|. |.|++ +..|++++++++++.+-
T Consensus 193 ~~~l~~la~~~~~~li~D-e~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g------~r~G~v~~~~~~~~~l~ 265 (397)
T PRK06939 193 LPEICDLADKYDALVMVD-DSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGG------ASGGYTAGRKEVIDWLR 265 (397)
T ss_pred HHHHHHHHHHhCCEEEEE-CcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCc------cCceEEEeCHHHHHHHH
Confidence 999999999999999994 444444332111 12579999997 88742 23589998888776651
Q ss_pred CcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC
Q 001579 385 GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL 464 (1050)
Q Consensus 385 grivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~ 464 (1050)
.. ... +.+ . +.+..+...+..+++ .++ .+ .+++.++..++.+++++.|+++
T Consensus 266 ~~---------~~~-~~~-------------~--~~~~~~~~~a~~~al--~~~-~~-~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 266 QR---------SRP-YLF-------------S--NSLAPAIVAASIKVL--ELL-EE-SDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred Hh---------Ccc-ccc-------------c--CCCCHHHHHHHHHHH--HHH-hc-CHHHHHHHHHHHHHHHHHHHHc
Confidence 00 000 000 0 111122222333333 333 12 2567788889999999999988
Q ss_pred CCEEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeee-------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 465 GTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 465 G~~~l~~~~~~~~v~i~~~~---~~~i~~~L~~~GI~~~~~-------~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
| +++... ....+.+..+. ..++.+.|.++||.+... ..+.+|++++.++|++||+++++.|.
T Consensus 317 ~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~ 388 (397)
T PRK06939 317 G-FTLGPG-EHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFE 388 (397)
T ss_pred C-CCcCCC-CCCEEEEEECCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 7 765432 11123333332 678999999999987532 12579999999999999999999996
No 186
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.70 E-value=4.4e-15 Score=174.20 Aligned_cols=292 Identities=18% Similarity=0.271 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhc-CC-CCCCEEEE-cCCCCCccHHHHHhCC-------
Q 001579 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKAR-GD-HHRNVCII-PVSAHGTNPATAAMCG------- 701 (1050)
Q Consensus 632 ~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~-G~-~~r~~Vli-p~saHgt~pa~a~~~G------- 701 (1050)
+...++++.|++++|.+.+ +..+||++++++++.++|.|+..+ |. +++++|+. ..+.||..-....+.|
T Consensus 79 ~~~~~l~~~l~~~~~~~~~-~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~ 157 (401)
T TIGR01885 79 DVFGEFAEYVTKLFGYDKV-LPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTN 157 (401)
T ss_pred HHHHHHHHHHHhhcCCCEE-EEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccc
Confidence 3456889999999997754 667899999999999888875322 32 23556664 4466887555433322
Q ss_pred -----CEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEecccccc
Q 001579 702 -----MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNA 772 (1050)
Q Consensus 702 -----~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~a 772 (1050)
..++.++. .|+++|+++++++++++++|+++.+ +..|.+.+ .+++|.++|++||+++++|+++. +
T Consensus 158 ~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g 231 (401)
T TIGR01885 158 FGPYVPGFKKIPY-----NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQT-G 231 (401)
T ss_pred cCCCCCCceEeCC-----CCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-C
Confidence 12344443 3799999999766678888888765 46787762 39999999999999999999852 2
Q ss_pred ccccCCCC--------cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCc
Q 001579 773 QVGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 844 (1050)
Q Consensus 773 l~gl~~pg--------~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~s 844 (1050)
+.+.| .+..|++++ .|.|+ +||..+|+++.++++.+.+..... ....+
T Consensus 232 ---~g~~G~~~~~~~~~~~~di~~~--gK~l~----~g~~~ig~v~~~~~i~~~~~~~~~--------------~~t~~- 287 (401)
T TIGR01885 232 ---LGRTGKLLCVDHENVKPDIVLL--GKALS----GGVYPVSAVLADDDVMLTIKPGEH--------------GSTYG- 287 (401)
T ss_pred ---CCccchhhHHhhcCCCCCEEEe--ecccc----CCCCCcEEEEEcHHHHhhccCCCC--------------CCCCC-
Confidence 33232 235788876 48774 455678888888777665431100 00111
Q ss_pred chhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCee--ecCCCCccceeEEEecccccccCCCCHH
Q 001579 845 APWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPE 921 (1050)
Q Consensus 845 a~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~ 921 (1050)
+++..++++.+.+..+..+++.+ +...+++++.++|+++ .++. ..| .|. +..+.++... .+.+..
T Consensus 288 ---~~p~~~~aa~a~L~~i~~~~l~~---~~~~~~~~~~~~L~~l~~~~~~~~~g-~g~-~~~i~~~~~~----~~~~~~ 355 (401)
T TIGR01885 288 ---GNPLACAVAVAALEVLEEEKLAE---NAEKLGEIFRDQLKKLPKPIITEVRG-RGL-LNAIVIDESK----TGRTAW 355 (401)
T ss_pred ---CCHHHHHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHhccCCceeEEee-cCe-eEEEEeccCc----chhHHH
Confidence 23344455666677765555543 4446689999999876 3332 112 122 2222232210 123567
Q ss_pred HHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 922 DVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 922 ~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
++.++|.++|+.+.... .+.+||+|+..+|++|||+++++|.+++
T Consensus 356 ~l~~~l~~~Gv~v~~~~---~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 356 DLCLKLKEKGLLAKPTH---GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred HHHHHHHhCCEEEEecC---CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 89999999999875322 4789999999999999999999998764
No 187
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.70 E-value=1.8e-15 Score=173.79 Aligned_cols=288 Identities=15% Similarity=0.187 Sum_probs=185.8
Q ss_pred cHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEc
Q 001579 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~ 708 (1050)
|+.+...++++.+++++|.+. .+..++|+++.++ +++.+. .++++|+++...|+.+...+.+.|.+++.++
T Consensus 58 g~~~~~~~l~~~la~~~~~~~-~i~~~~G~~~~~~---~l~~~~-----~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~ 128 (360)
T TIGR00858 58 GNSPLHEELEEELAEWKGTEA-ALLFSSGYLANVG---VISALV-----GKGDLILSDALNHASLIDGCRLSGARVRRYR 128 (360)
T ss_pred CCcHHHHHHHHHHHHHhCCCC-EEEECchHHHHHH---HHHHhC-----CCCCEEEEEccccHHHHHHHHhcCCceEEec
Confidence 444567789999999998654 4566777665433 333331 2467899988888777777888999998887
Q ss_pred CCCCCCCCHHHHHHHHHcCC-CCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccC-CC-----C
Q 001579 709 TDAKGNINIEELRKAAEANR-DNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SP-----G 780 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~-~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~-~p-----g 780 (1050)
. +|+++|+++++++. +++++|++..+ +.+|... ++++|.++|+++|+++++|+++.....+.. .+ +
T Consensus 129 ~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~-~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 202 (360)
T TIGR00858 129 H-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIA-PLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFG 202 (360)
T ss_pred C-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCc-CHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcC
Confidence 4 68999999997543 35788887777 4678887 799999999999999999998743221111 00 0
Q ss_pred --cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHH
Q 001579 781 --YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYT 858 (1050)
Q Consensus 781 --~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1050)
..+.|+++.++||+|+. +| |+++.++++...+.... .... .....++ ..++++.+
T Consensus 203 ~~~~~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~~-----------~~~~-~~~~~~~----~~~~a~~~ 259 (360)
T TIGR00858 203 LKPEPVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINRA-----------RTLI-FSTALPP----AVAAAALA 259 (360)
T ss_pred CCccCCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHhC-----------ccce-ecCCCCH----HHHHHHHH
Confidence 13678999999999963 33 78877766554331000 0000 0001111 11122233
Q ss_pred HHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 001579 859 YIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1050)
Q Consensus 859 ~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~ 937 (1050)
.+..+.. +.+..++...+.+++.+.|+++ +.+. .+.+.+ +.+.+.. +.+..++.++|.++||.+...
T Consensus 260 al~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~---~~~~~~~-----~~~~~~~~~~l~~~gI~v~~~ 327 (360)
T TIGR00858 260 ALELIQE--EPWRREKLLALIARLRAGLEALGFTLM--PSCTPI---VPVIIGD-----NASALALAEELQQQGIFVGAI 327 (360)
T ss_pred HHHHHhh--CHHHHHHHHHHHHHHHHHHHHcCCccC--CCCCCE---EEEEeCC-----HHHHHHHHHHHHHCCeeEeee
Confidence 3333221 2345566778889999999875 3332 111222 3455431 234678999999999987532
Q ss_pred CC---C-CCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 938 SW---P-VPGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 938 ~~---p-v~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
.+ + ..+.+||+++..++++|+++++++|+
T Consensus 328 ~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 328 RPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 22 1 13589999999999999999999873
No 188
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.70 E-value=5.3e-15 Score=172.84 Aligned_cols=306 Identities=16% Similarity=0.187 Sum_probs=190.5
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Ceee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGF--DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~--d~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++...+.+++.+..|. +... +..++++++...++ +.+. .+++.|++++..|+.+...++..|.++
T Consensus 68 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~---~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~ 139 (393)
T PRK05764 68 AGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAF---MALL-----DPGDEVIIPAPYWVSYPEMVKLAGGVP 139 (393)
T ss_pred CChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHH---HHhc-----CCCCEEEecCCCCcchHHHHHHcCCEE
Confidence 56656666666666555554 3223 33444555553333 3221 245789999988887777788899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccccC-
Q 001579 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLT- 777 (1050)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~gl~- 777 (1050)
+.++.+++ +.+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++... ..+..
T Consensus 140 ~~~~~~~~~~~~~d~~~l~~~l~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 216 (393)
T PRK05764 140 VFVPTGEENGFKLTVEQLEAAIT---PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEF 216 (393)
T ss_pred EEEecCcccCCcCCHHHHHHhhC---ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCc
Confidence 99999743 5789999999996 678899999994 688873 36999999999999999999875321 11110
Q ss_pred -C-----CCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHH
Q 001579 778 -S-----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1050)
Q Consensus 778 -~-----pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1050)
. +...+.++++.++.|+|+.| |.++|+++.++++...+... . .....+++ ...+.
T Consensus 217 ~~~~~~~~~~~~~~i~~~s~SK~~~~~----G~RiG~i~~~~~~~~~~~~~-~-----------~~~~~~~~--~~~q~- 277 (393)
T PRK05764 217 TSIASLSPELRDRTITVNGFSKAYAMT----GWRLGYAAGPKELIKAMSKL-Q-----------SHSTSNPT--SIAQY- 277 (393)
T ss_pred ccHHHcCCCCcCCEEEEecCcccccCc----cceeEEEecCHHHHHHHHHH-H-----------hhcccCCC--hHHHH-
Confidence 0 12234578888889998654 56789999887766544210 0 00011111 11111
Q ss_pred HHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HC
Q 001579 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1050)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~ 930 (1050)
++...+.. ..+.+++..+....+.+++.+.|+++-.+.+..+.+..+ ++++++......+.+..++.+.|. ++
T Consensus 278 ---~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~ 351 (393)
T PRK05764 278 ---AAVAALNG-PQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKPEGAFY--VFPNVSKLLGKSITDSLEFAEALLEEA 351 (393)
T ss_pred ---HHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCCCcceE--EEEecccccccccCCHHHHHHHHHHhC
Confidence 11222221 234445555556677888889998751222222233221 334554211111224578888875 68
Q ss_pred Cccc-CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 931 GFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 931 Gi~~-~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
||.+ +...|+..+.+||++. .+.++++++++.|.+++.+
T Consensus 352 gi~v~~g~~f~~~~~vRis~~--~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 352 GVAVVPGIAFGAPGYVRLSYA--TSLEDLEEGLERIERFLES 391 (393)
T ss_pred CEEEccccccCCCCEEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 9986 4444655689999986 4689999999999988764
No 189
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.70 E-value=3.3e-15 Score=171.51 Aligned_cols=311 Identities=16% Similarity=0.119 Sum_probs=205.5
Q ss_pred HHHHHHHHHHhcCC--CccccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCC
Q 001579 151 SQMIEHMQKLASMN--KVYKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPM 228 (1050)
Q Consensus 151 ~e~~~~~~~la~~n--~~~~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~ 228 (1050)
.+.++++++--++. ...++|+|...+|....+.+. .+.. |+ |..+.+.++++.+|+++|.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~ylgl~~~~~~~~~~~~-~~~~-------~~--------g~~~~~~~Le~~lA~~~g~~~ 71 (346)
T TIGR03576 8 EKALEIIREKISRGGRDSLYDLTGLAGGFKIDEEDLE-LLET-------YV--------GPAIFEEKVQELGREHLGGPE 71 (346)
T ss_pred HHHHHHHHHHHhccCCccccccccCCCChhHHHHHHH-HHHH-------hc--------CCHHHHHHHHHHHHHHcCCCc
Confidence 45677887666665 568899999998776666553 3332 21 344677888999999999988
Q ss_pred cceeEecchHHHHHHHHHHhhhhcCCCCEEEEc---CCCChhHHHHHHHhccCCCeEEEEc-CchhhhccCCCeeEEEEE
Q 001579 229 SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIA---SNCHPQTIDICITRADGFDIKVVVS-DLKDIDYKSGDVCGVLVQ 304 (1050)
Q Consensus 229 anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs---~~~Hps~~~~~~~~a~~~gi~v~~~-~~~~l~~l~~~t~~V~v~ 304 (1050)
.++.+++||+.+..+++.++. ++||+|+++ ...|+++...++. .|.++... ++++++. .+++++|+++
T Consensus 72 e~ilv~~gg~~a~~~~~~al~---~~gd~Vli~~~d~p~~~s~~~~~~l----~ga~~~~~~~l~~l~~-~~~~~lIiit 143 (346)
T TIGR03576 72 EKILVFNRTSSAILATILALE---PPGRKVVHYLPEKPAHPSIPRSCKL----AGAEYFESDELSELKK-IDGTSLVVIT 143 (346)
T ss_pred ceEEEECCHHHHHHHHHHHhC---CCCCEEEECCCCCCCchhHHHHHHH----cCCEEeccCCHHHHhh-CcCceEEEEE
Confidence 889999999988888777653 378999864 4699999887653 35555432 4444432 3467888888
Q ss_pred cCCCCeeE---ccHHHHHHHHHhCCcEEEEEecCccccCCC-----CCCcccceEEEecC-ccccccCCCCCcceEEEEE
Q 001579 305 YPGTEGEV---LDYGDFIKNAHANGVKVVMATDLLALTILK-----PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLAT 375 (1050)
Q Consensus 305 ~pn~~G~i---~di~~I~~~ah~~galliV~a~~~alg~l~-----~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~ 375 (1050)
.++++|.+ .|+++|+++|+++|++++| ++.++.++.. +..++|+|++++|. |.+ +|+.+||+++
T Consensus 144 g~s~~G~v~~~~~L~~i~~la~~~~~~liv-DEAy~~~~~~~~~~~~~~~~~~divv~s~SKal------aG~r~G~v~~ 216 (346)
T TIGR03576 144 GSTMDLKVVSEEDLKRVIKQAKSKEAIVLV-DDASGARVRRLYGQPPALDLGADLVVTSTDKLM------DGPRGGLLAG 216 (346)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHcCCEEEE-ECCccccccccCCCCCHHHcCCcEEEeccchhc------cccceEEEEe
Confidence 77889998 7999999999999999999 3555554321 11246789999986 744 3456789999
Q ss_pred ehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHH
Q 001579 376 SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAG 455 (1050)
Q Consensus 376 ~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~ 455 (1050)
++++++.|.. ...+++.|..+. +..++.. ++-. ...+.+.+...++.+
T Consensus 217 ~~~li~~l~~-----------------------------~~~~~~~s~~~~-~~~aa~~-aL~~-~~~~~~~~~l~~r~~ 264 (346)
T TIGR03576 217 RKELVDKIKS-----------------------------VGEQFGLEAQAP-LLAAVVR-ALEE-FELSRIRDAFKRKEE 264 (346)
T ss_pred CHHHHHHHHH-----------------------------hhcCcccCccHH-HHHHHHH-HHhh-ccHHHHHHHHHHHHH
Confidence 9888776510 011112111122 2222221 1111 123556677777888
Q ss_pred HHHHHHhcCCCEEEcC-CCCccEEEEecCC---HHHHHHHHHHcCceeeeec-----CCeEEEEeccCC-CHHHHHHHHH
Q 001579 456 TFALGLKKLGTVEVQG-LPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD-----SNTVTASFDETT-TLEDVDKLFI 525 (1050)
Q Consensus 456 ~l~~~L~~~G~~~l~~-~~~~~~v~i~~~~---~~~i~~~L~~~GI~~~~~~-----~~~lris~~e~~-t~edId~lv~ 525 (1050)
++.+.++.+ .+.. +..| +.++++. .+.+.+.|.++||.++... ++.+|||+.... ++.+.++|++
T Consensus 265 ~~~~~l~~~---~~~~~~~~f--~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~ 339 (346)
T TIGR03576 265 VYLRLFDKL---NVERTPTGF--VIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVE 339 (346)
T ss_pred HHHHHHHhC---CCCcCCCeE--EEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHH
Confidence 887777743 3332 1112 3345542 3455666677899886531 578999998543 3448999999
Q ss_pred HHhC
Q 001579 526 VFAG 529 (1050)
Q Consensus 526 ~l~~ 529 (1050)
+|+.
T Consensus 340 al~~ 343 (346)
T TIGR03576 340 AVKD 343 (346)
T ss_pred HHHh
Confidence 9974
No 190
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.70 E-value=1.1e-14 Score=171.97 Aligned_cols=332 Identities=18% Similarity=0.202 Sum_probs=204.7
Q ss_pred cccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhh----CCC-eeeeccCchHHHHHHHH
Q 001579 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT----GFD-SFSLQPNAGAAGEYAGL 665 (1050)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~----G~d-~~~l~~~sGa~ge~a~L 665 (1050)
...||+|..++..++..+... ..+.....+. .+...++.+.|++++ +++ .+.+..+||++++++++
T Consensus 50 ~~~lGh~~p~v~~ai~~ql~~-~~~~~~~~~~--------~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~Al 120 (425)
T PRK09264 50 ALNYGHNNPVLKQALIDYLQR-DGITHGLDMH--------TTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAAL 120 (425)
T ss_pred hccCCCCCHHHHHHHHHHHHh-cccccccccC--------cHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHH
Confidence 356899988888777665321 1111100111 123446777888865 244 34455689999999999
Q ss_pred HHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhC---------CC---EEEEEcCCCCC---CCCHHHHHHHHHcCC-
Q 001579 666 MVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMC---------GM---KIVSVGTDAKG---NINIEELRKAAEANR- 728 (1050)
Q Consensus 666 lair~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~---------G~---~vv~V~~d~~g---~iD~e~L~~~i~~~~- 728 (1050)
+.+|.| . +|++|| +..++||....+.... |. .++.+|..... .-|+++|++.+++++
T Consensus 121 klAr~~---t---gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~ 194 (425)
T PRK09264 121 KLARKV---T---GRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS 194 (425)
T ss_pred HHHHHh---c---CCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence 988877 2 244555 5778999876553321 11 35566653211 137889999997542
Q ss_pred --CCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCc--------ccCcEEEeCCccc
Q 001579 729 --DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKT 794 (1050)
Q Consensus 729 --~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~--------~GaDv~~~~~hKt 794 (1050)
+++++|+++.- +..|++. +.+++|+++|++||+++++|+++ .|+.+.|. ..+|++++ .|.
T Consensus 195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~----tG~GrtG~~~~~~~~~v~PDi~t~--~K~ 268 (425)
T PRK09264 195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQ----AGCGRTGTFFSFERAGITPDIVTL--SKS 268 (425)
T ss_pred CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechh----hCCccccHHHHHhhcCCCCCEEEe--ccc
Confidence 46888888753 4557643 26999999999999999999874 45555542 24688776 487
Q ss_pred cccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHH-HHHChhhHHHHHH
Q 001579 795 FCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI-AMMGSKGLTEASK 873 (1050)
Q Consensus 795 f~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l-~~lG~eGl~~~a~ 873 (1050)
++ +||-.+|.+++++++..+.++. + +. ++.|++..++++.+.+ ..+..+++. +
T Consensus 269 l~----~~G~pigav~~~~~i~~~~~~~----------~------~~---T~~gnp~~~aaa~a~l~~~~~~~~l~---~ 322 (425)
T PRK09264 269 IS----GYGLPMALVLIKPELDVWKPGE----------H------NG---TFRGNNLAFVTATAALEEYWSDDAFE---K 322 (425)
T ss_pred cC----CCccceEEEEEchhhhccCCCc----------c------CC---CCCCCHHHHHHHHHHHHHHHhhhHHH---H
Confidence 74 3244478888887763221110 0 01 1223444444555555 444443343 3
Q ss_pred HHHHHHHHHHHHHhcc---CC-eee--cCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEE
Q 001579 874 IAILNANYMAKRLEKH---YP-ILF--RGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMI 947 (1050)
Q Consensus 874 ~~~~~a~yl~~~L~~~---~~-v~~--~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI 947 (1050)
+...+.++|.++|+++ ++ +.. .| .|.. +.+.+.+ ......+.+.|.++|+.+..... ....||+
T Consensus 323 ~~~~~g~~l~~~l~~l~~~~~~~~~~vrg-~Gl~---~~i~l~~-----~~~~~~l~~~~~~~Gv~~~~~~~-~~~~lr~ 392 (425)
T PRK09264 323 EVKAKGELVRERLEEIAAKYPGLGAEVRG-RGMM---QGIDFGD-----GELAGKIAAEAFENGLIIETSGP-EDEVVKL 392 (425)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceeccee-cccE---EEEEecC-----hHHHHHHHHHHHHCCCEEeccCC-CCCEEEE
Confidence 4446778888888664 32 111 11 1221 2333321 12346788999999998753321 1378999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 001579 948 EPTESESKEELDRYCDALISIREEIAQIENGK 979 (1050)
Q Consensus 948 ~~te~~t~eeid~fv~aL~~i~~ei~~~~~~~ 979 (1050)
.|+..+|++|||++++.|.++++++.++|+.+
T Consensus 393 ~p~l~~t~~ei~~~~~~l~~~l~~~~~~~~~~ 424 (425)
T PRK09264 393 LPPLTIDEEELEEGLDILEEAVAEVLAEEESK 424 (425)
T ss_pred eCCCCCCHHHHHHHHHHHHHHHHHHHhccccC
Confidence 99999999999999999999999887766543
No 191
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=4.6e-15 Score=174.59 Aligned_cols=329 Identities=13% Similarity=0.179 Sum_probs=207.4
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llair 669 (1050)
..||+|...+..++..+. ....+..+.-+. .+...++.+.|+++++ ++.+ ++.+||++++++++..+|
T Consensus 52 ~~lGh~~p~i~~ai~~q~-~~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~v-~f~~SGseA~e~AlklAr 121 (422)
T PRK05630 52 AAHGHGHPRLKAAAHKQI-DTMSHVMFGGLT--------HEPAIKLTRKLLNLTDNGLDHV-FYSDSGSVSVEVAIKMAL 121 (422)
T ss_pred hcCCCCCHHHHHHHHHHH-HhCCCcccCCcC--------CHHHHHHHHHHHhhCCCCcCEE-EEeCCcHHHHHHHHHHHH
Confidence 467888877776666553 221121110011 1224578888999874 4444 677899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC-------------CEEEEEcCCCCCCCC-------HHHHHHHHHcCC
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------------MKIVSVGTDAKGNIN-------IEELRKAAEANR 728 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G-------------~~vv~V~~d~~g~iD-------~e~L~~~i~~~~ 728 (1050)
.|...+|..+|.+|| ...++||..-.+..+.+ ..+..+|.......+ .+.+++.++
T Consensus 122 ~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 198 (422)
T PRK05630 122 QYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID--- 198 (422)
T ss_pred HHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh---
Confidence 987666655566666 57789997655543322 122334432111111 345555564
Q ss_pred CCEEEEEEEcC--CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCcccc
Q 001579 729 DNLSTLMVTYP--STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTF 795 (1050)
Q Consensus 729 ~~taaV~vt~P--n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~hKtf 795 (1050)
+++++|+++.- ...|++. +.+++|.++|++||+++++|.+ +.|+.+.|.+ -+|++++ .|.+
T Consensus 199 ~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv----~tG~GrtG~~~a~~~~gv~PDi~t~--gK~l 272 (422)
T PRK05630 199 ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEI----ATGFGRTGELFATLAAGVTPDIMCV--GKAL 272 (422)
T ss_pred hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecc----eeCCCcCchhhHHHhcCCCCCeeee--echh
Confidence 68999998862 3456653 3689999999999999999987 4666666643 3688866 5877
Q ss_pred ccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHH
Q 001579 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 875 (1050)
Q Consensus 796 ~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~ 875 (1050)
+ +|-+.+|.+++++++.+.+.... +. ... ...+++.|++..++++.+.+..+.++.+.+ +.
T Consensus 273 ~----gG~~p~~av~~~~~i~~~~~~~~-~~----------~~~-~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~---~~ 333 (422)
T PRK05630 273 T----GGFMSFAATLCTDKVAQLISTPN-GG----------GAL-MHGPTFMANPLACAVAHASLEIIETGMWRK---QV 333 (422)
T ss_pred h----cCccccceeeccHHHHHHHhccC-CC----------Ccc-ccCCCCcCCHHHHHHHHHHHHHHHhCcHHH---HH
Confidence 3 33366788888887766543110 00 000 011124467777888888888887665533 45
Q ss_pred HHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCC
Q 001579 876 ILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTE 951 (1050)
Q Consensus 876 ~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te 951 (1050)
..+.++|+++|+++ ++.+ ..|. |. + +-+.+.. ......+.+.+.++|+.+... .+.+++.|+.
T Consensus 334 ~~~g~~l~~~L~~l~~~~~v~~vRg~-Gl-~--~~ie~~~-----~~~~~~~~~~~~~~Gl~~~~~----g~~l~~~PpL 400 (422)
T PRK05630 334 KRIEAELIAGLSPLAHLPGVADVRVL-GA-I--GVVEMEQ-----PVDMEEATQAAVDHGVWLRPF----GRLVYVMPPY 400 (422)
T ss_pred HHHHHHHHHHHHHhhcCCCeeeeecc-cc-E--EEEEECC-----cccHHHHHHHHHHCCeEEEec----CCEEEEECCc
Confidence 56778888888754 2211 1121 21 1 2233321 123568899999999987532 3789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 001579 952 SESKEELDRYCDALISIREE 971 (1050)
Q Consensus 952 ~~t~eeid~fv~aL~~i~~e 971 (1050)
..|++|||+++++|.+++..
T Consensus 401 ~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 401 ITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred cCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999988753
No 192
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=7.7e-15 Score=174.58 Aligned_cols=338 Identities=14% Similarity=0.168 Sum_probs=216.9
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llair 669 (1050)
..+|+|...+..++..+. ....+.....+. .+...++.+.|++++. ++. .++.++|+++++++++.+|
T Consensus 59 ~~lGh~~p~v~~Ai~~ql-~~l~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~-v~f~~sGsEAve~AlKlAr 128 (466)
T PRK07030 59 NVFGHANPRINQRIKDQV-DQLEHVILAGFS--------HEPVIELSERLVKITPPGLSR-CFYADNGSSAIEVALKMSF 128 (466)
T ss_pred hcCCCCCHHHHHHHHHHH-HhcCCccccccC--------CHHHHHHHHHHHHhCCCCcCE-EEEeCCcHHHHHHHHHHHH
Confidence 357888887777666553 221111110111 1334578888999874 444 3668899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCC-----C-------CCCHHHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----G-------NINIEELRKAA 724 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~-----g-------~iD~e~L~~~i 724 (1050)
.|...+|.++|.+|| ...++||....+....|- .+..+|.... + .-+++++++.+
T Consensus 129 ~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~ 208 (466)
T PRK07030 129 HYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTL 208 (466)
T ss_pred HHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHH
Confidence 887667765566666 577899977655433221 1334443211 1 11367788888
Q ss_pred HcCCCCEEEEEEEc-C-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCC
Q 001579 725 EANRDNLSTLMVTY-P-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNL 791 (1050)
Q Consensus 725 ~~~~~~taaV~vt~-P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~ 791 (1050)
+++.+++++|+++. . ...|++. ..++++.++|+++|+++|+|.+ +.|+.+.|.+ -+|++++
T Consensus 209 ~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV----~TGfGRtG~~~a~~~~gv~PDiv~~-- 282 (466)
T PRK07030 209 AEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEI----AVGFGRTGTMFACEQAGIRPDFLCL-- 282 (466)
T ss_pred HhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeeh----hhCcCccccchHHHhcCCCCCEEee--
Confidence 87778999999986 2 4456654 2599999999999999999976 6778777753 3699887
Q ss_pred ccccccCCCCCC-CcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 792 HKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 792 hKtf~~P~g~GG-Pg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ || -.+|.+++++++.+.+.... . ..... ...+++.|+++.++++.+.|..+-++++.+
T Consensus 283 gKgl~-----gG~~Pi~av~~~~ei~~~~~~~~--~--------~~~~~-~h~~T~~gnpla~aaa~a~L~~i~~~~l~~ 346 (466)
T PRK07030 283 SKALT-----GGYLPLAAVLTTDTVYQAFYDDY--P--------TLRAF-LHSHSYTGNPLACAAALATLDIFEQDNVIE 346 (466)
T ss_pred ehhcc-----CCcccceEEEecHHHHHHHhccc--c--------ccccc-ccCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 58774 44 24777888887765431100 0 00000 011224467788888899999987776544
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEeccccc--c-cCCC---CHHHHHHHHHHCCcccCCCCCC
Q 001579 871 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLK--N-TAGI---EPEDVAKRLMDYGFHGPTMSWP 940 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~--~-~~g~---~~~~vakrL~d~Gi~~~~~~~p 940 (1050)
+.....++|.++|+++ ++.+ ..|. |.. +.+.+..-+ + .... ....+.+++.++|+.+...
T Consensus 347 ---~~~~~G~~l~~~L~~l~~~~~v~~vrG~-Gl~---~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~--- 416 (466)
T PRK07030 347 ---NNRALARRMAEATAHLADHPHVAEVRQT-GMI---LAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL--- 416 (466)
T ss_pred ---HHHHHHHHHHHHHHHHhcCCCEEEeEec-eeE---EEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec---
Confidence 4446788888888775 3221 2231 322 122221100 0 0000 1246888889999987532
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 941 VPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 941 v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
.+.+++.|+..+|++|||.++++|.++++++
T Consensus 417 -g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 -GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred -CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999999999999999887
No 193
>PRK06541 hypothetical protein; Provisional
Probab=99.70 E-value=1.3e-14 Score=172.41 Aligned_cols=339 Identities=17% Similarity=0.186 Sum_probs=209.7
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCC--CeeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~--d~~~l~~~sGa~ge~a~Llair 669 (1050)
..||+|..++..++..+... ..+.....+. .+...++.+.|+++++. +.+ ++.++|++++++++..+|
T Consensus 64 ~~lGh~~p~v~~Av~~q~~~-~~~~~~~~~~--------~~~~~~la~~l~~~~p~~~~~v-~f~~sGseAve~AlklAr 133 (460)
T PRK06541 64 VQVGHGRAELAEAAAKQAGT-LAFFPLWSYA--------HPPAIELAERLAALAPGDLNRV-FFTTGGSEAVESAWKLAK 133 (460)
T ss_pred ccCCCCCHHHHHHHHHHHhh-CcCccccccC--------CHHHHHHHHHHHHhCCCCcCEE-EEcCCcHHHHHHHHHHHH
Confidence 46899988887776665322 1111100111 13345788888888753 343 667999999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCCC-----CCC--------HHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKG-----NIN--------IEELRKA 723 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~g-----~iD--------~e~L~~~ 723 (1050)
.|+...|..+|.+|| +..++||....+....|. .+..++...-. .-| ++++++.
T Consensus 134 ~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 213 (460)
T PRK06541 134 QYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEA 213 (460)
T ss_pred HHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHH
Confidence 887655544455665 577899987665433221 13334432110 012 4778888
Q ss_pred HHcC-CCCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeC
Q 001579 724 AEAN-RDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 790 (1050)
Q Consensus 724 i~~~-~~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~ 790 (1050)
++++ .+++++|+++.- +..|++. +.+++|+++|+++|+++|+|.+ +.|+.+.|.+ -+|++++
T Consensus 214 l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV----~tGfGR~G~~~a~~~~gv~PDivt~- 288 (460)
T PRK06541 214 IEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEV----ICAFGRLGEMFGCERFGYVPDIITC- 288 (460)
T ss_pred HHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech----hhCCCcCchhhhhhhcCCCCCEEEe-
Confidence 8753 356777776542 5667765 1399999999999999999987 4455555542 2688875
Q ss_pred CccccccCCCCCCC-cceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHH
Q 001579 791 LHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1050)
Q Consensus 791 ~hKtf~~P~g~GGP-g~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1050)
.|.++ ||. .+|.+++++++...+.... . ..... +++.|++..++++.+.+..+..+++.
T Consensus 289 -gK~l~-----~G~~pigav~~~~~i~~~~~~~~-~------------~~~~~-~T~~gnp~~~aaala~l~~l~~~~~~ 348 (460)
T PRK06541 289 -AKGIT-----SGYSPLGAMIASDRLFEPFLDGP-T------------MFLHG-YTFGGHPVSAAVALANLDIFEREGLL 348 (460)
T ss_pred -ccccc-----CCccceeEEEEcHHHHHHhhcCC-C------------ccccC-CCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 58774 443 4778888877665432100 0 00011 12345667777788888887766654
Q ss_pred HHHHHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEeccc---cccc--CCC----CHHHHHHHHHHCCcccCC
Q 001579 870 EASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRG---LKNT--AGI----EPEDVAKRLMDYGFHGPT 936 (1050)
Q Consensus 870 ~~a~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~---~~~~--~g~----~~~~vakrL~d~Gi~~~~ 936 (1050)
++...+.++|.++|+++ ++++ ..|. |.. +.+.+.. -+.. ... -...+.++|.++|+.+..
T Consensus 349 ---~~~~~~g~~l~~~L~~l~~~~~v~~vrg~-Gl~---~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~ 421 (460)
T PRK06541 349 ---DHVRDNEPAFRATLEKLLDLPIVGDVRGD-GYF---YGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRA 421 (460)
T ss_pred ---HHHHHHHHHHHHHHHHhhcCCCeEEEEec-ceE---EEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEe
Confidence 44557788999999875 2321 2232 322 1222210 0000 000 012577889999999753
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 937 MSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 937 ~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
... -.+.||++|+..+|++|||+++++|.+++.++.
T Consensus 422 ~~~-g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 422 DDR-GDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred cCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 211 136899999999999999999999999987654
No 194
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.70 E-value=1e-14 Score=173.51 Aligned_cols=341 Identities=16% Similarity=0.163 Sum_probs=212.0
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC-------CCeeeeccCchHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-------FDSFSLQPNAGAAGEYAG 664 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G-------~d~~~l~~~sGa~ge~a~ 664 (1050)
..+|+|..++..++..+. ..-.+....-+.. +...++.+.|++++. ++. .++.+||+++++++
T Consensus 76 ~~lGh~~p~i~~Ai~~q~-~~l~~~~~~~~~~--------~~~~~lae~L~~~~p~~~~~~~~~~-v~f~~sGSEAvE~A 145 (472)
T PRK08742 76 NLFGHAEPRIGAAIAAQA-GELEQVMLAGFTH--------EPAVQLAEQLLAIAPRQDGRAPLSK-VFYADNGSAGVEVA 145 (472)
T ss_pred ccCCCCCHHHHHHHHHHH-HhCCCccccccCC--------HHHHHHHHHHHHhCCCcccCCCCCE-EEEeCCchHHHHHH
Confidence 357888877776665552 1111111001111 224478888888874 233 47789999999999
Q ss_pred HHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCC-----C-------CCCHHH
Q 001579 665 LMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----G-------NINIEE 719 (1050)
Q Consensus 665 Llair~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~-----g-------~iD~e~ 719 (1050)
++.+|.|...+|+++|.+|| ...++||....+....|. .+..++.... + ..+++.
T Consensus 146 lKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 225 (472)
T PRK08742 146 LKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADA 225 (472)
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHH
Confidence 99999987666755566666 577899987655433221 2334443211 1 114678
Q ss_pred HHHHHHcCCCCEEEEEEEc-C-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcE
Q 001579 720 LRKAAEANRDNLSTLMVTY-P-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADV 786 (1050)
Q Consensus 720 L~~~i~~~~~~taaV~vt~-P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv 786 (1050)
+++.++++.+++++|+++. . +..|++. ..++++.++|+++|+++|+|.+ +.|+.+.|.+ -+|+
T Consensus 226 l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV----~TGfGRtG~~~a~e~~gv~PDi 301 (472)
T PRK08742 226 LQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEI----ATGFGRTGTLFACEQAGVMPDL 301 (472)
T ss_pred HHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEech----hhCCCCCccchHHHhcCCCCCE
Confidence 8888876668899999986 2 3557654 2599999999999999999976 6778777753 3699
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+++ .|.++ +|--.+|.+++++++.+.+..... . ......+++.|+++.++++.+.|..+-++
T Consensus 302 v~~--gKgl~----gG~~Plaav~~~~ei~~~~~~~~~-----------~-~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~ 363 (472)
T PRK08742 302 LCL--SKGLT----GGFLPLSAVLATQQLYDAFLDDSR-----------E-RAFLHSHSYTGNPLACAAALATLDIFADD 363 (472)
T ss_pred EEE--ccccc----CCCCCcceeeccHHHHHHhhccCc-----------c-CccCcCCCCCccHHHHHHHHHHHHHHHHC
Confidence 887 58774 332136777778776654321100 0 00011123446778888899999998887
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEecccccccC-CCC---HHHHHHHHHHCCcccCCCC
Q 001579 867 GLTEASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTA-GIE---PEDVAKRLMDYGFHGPTMS 938 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~~~-g~~---~~~vakrL~d~Gi~~~~~~ 938 (1050)
++.+.++ ...++|.+.++.. ++++ ..|. |. +..+-+....-.++. ..+ ...+.+++.++|+.+..
T Consensus 364 ~l~~~~~---~~g~~l~~~~~~~~~~~~i~dvRG~-Gl-~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~-- 436 (472)
T PRK08742 364 DVIARNQ---PTAARMTQLAAQIGEHPHVADVRQA-GM-VVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRP-- 436 (472)
T ss_pred CHHHHHH---HHHHHHHHHHHHHhcCCCeeeEecc-ce-EEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEe--
Confidence 7654443 4455665554432 3322 2222 22 211222111000000 001 24677888999998753
Q ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 939 WPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 939 ~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
.+++||+.|+...|++|||.++++|.++++++-
T Consensus 437 --~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 437 --LGDVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred --cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 247999999999999999999999999988753
No 195
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=5.1e-15 Score=171.55 Aligned_cols=211 Identities=14% Similarity=0.125 Sum_probs=158.4
Q ss_pred HHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hhh
Q 001579 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (1050)
Q Consensus 215 e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~l 291 (1050)
.+++.+|+|-|.+. +.++.+|++|+.++++++ +. +||+||+++..|..+...++..++.+|+++.+++. +++
T Consensus 66 ~le~~la~LEg~~~--a~~~~SGmaAi~~~~~~l-l~--~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l 140 (395)
T PRK08114 66 SLQEAMCELEGGAG--CALYPCGAAAVANAILAF-VE--QGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADI 140 (395)
T ss_pred HHHHHHHHHhCCCe--EEEEhHHHHHHHHHHHHH-cC--CCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHH
Confidence 46689999999875 778999999999888765 33 89999999999999999887667789999999875 456
Q ss_pred hc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCC--cEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG--VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~g--alliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++ ++++|++|+++.| |.+|.+.||++|+++||++| ++++| ++.++.+.+..|.++||||++.|+ |.|++|-..
T Consensus 141 ~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvV-DnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv- 218 (395)
T PRK08114 141 AKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMI-DNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDA- 218 (395)
T ss_pred HHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEE-ECCCccccccCHHHcCCcEEEEcCcccccCCCcc-
Confidence 66 7889999999987 88999999999999999985 99999 456677878889999999999999 777654222
Q ss_pred CcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 367 GP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
.+|+++.+++....+- ..++..|. .. ++. ..|+...|-+-|.-+
T Consensus 219 --~~G~v~~~~~~~~~l~-------------------------~~~~~~G~--~~--~p~-----~a~l~~rgl~TL~lR 262 (395)
T PRK08114 219 --MIGTAVANARCWEQLR-------------------------ENSYLMGQ--MV--DAD-----TAYMTSRGLRTLGVR 262 (395)
T ss_pred --eeEEEEcCHHHHHHHH-------------------------HHHHhccC--CC--CHH-----HHHHHHcCCCcHHHH
Confidence 4577776665433220 00011110 00 111 123455555566667
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.+|..++|..+++.|++.+.++
T Consensus 263 ~~~~~~na~~va~~L~~hp~V~ 284 (395)
T PRK08114 263 LRQHEESSLKVAEWLAEHPEVA 284 (395)
T ss_pred HHHHHHHHHHHHHHHHcCCCEe
Confidence 7888899999999999886454
No 196
>PLN02590 probable tyrosine decarboxylase
Probab=99.69 E-value=4.9e-15 Score=177.28 Aligned_cols=360 Identities=12% Similarity=0.080 Sum_probs=214.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCCc-c--ccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHH
Q 001579 139 MKFSKFDEGLTESQMIEHMQKLASMNKV-Y--KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLN 215 (1050)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~~-~--~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e 215 (1050)
..+| .++.+-.++++++.+....... + ..|.|--.-+...++.+.+-+.+ .|-+ ..+.-+.+.+..+...+
T Consensus 101 ~~~P--~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~s--a~n~--~~~~~~~sPa~t~lE~~ 174 (539)
T PLN02590 101 DSAP--ERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNA--GLSV--VGFTWLTSPAATELEII 174 (539)
T ss_pred CCCC--CCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHH--hccc--ccCCcccCchhHHHHHH
Confidence 3455 5677888999999876544322 1 12333211111123333322221 1111 12233445566666777
Q ss_pred HHHHHHHhcCCCC-------cceeEecchHHHHHHHH-HHhhhh-c--C----CCCEEEEcCCCChhHHHHHHHhccCCC
Q 001579 216 FQTMIADLTGLPM-------SNASLLDEGTAAAEAMA-MCNNIQ-K--G----KKKTFIIASNCHPQTIDICITRADGFD 280 (1050)
Q Consensus 216 ~q~~ia~L~G~~~-------anasl~d~~Taa~eA~~-la~~~~-~--~----~gd~Vlvs~~~Hps~~~~~~~~a~~~g 280 (1050)
.-+++++|+|++. +...++++||.+.-..+ .|+... + + ++-.|++++..|.++.+.++.+ ++|
T Consensus 175 vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il--Glg 252 (539)
T PLN02590 175 VLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG--GIH 252 (539)
T ss_pred HHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc--CCC
Confidence 7889999999986 34667888885543333 333211 0 0 2235778999999999887643 232
Q ss_pred e-EEEEcCc----------hhhhc-cCC------CeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC
Q 001579 281 I-KVVVSDL----------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL 341 (1050)
Q Consensus 281 i-~v~~~~~----------~~l~~-l~~------~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l 341 (1050)
- .++.++. ++|++ |.. ...+|+.+.+ +.+|.++||++|+++|+++|++++|++-.-+..++
T Consensus 253 ~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~ 332 (539)
T PLN02590 253 EENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACI 332 (539)
T ss_pred cccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhc
Confidence 1 2444332 34444 422 2467777876 45899999999999999999999996522222222
Q ss_pred CCC------CcccceEEEecC-ccccccCCCCCcceEEEEEehh--hhhcC--CCcEEeEeecCCC-Ccc---eEEeccc
Q 001579 342 KPP------GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMM--PGRIVGVSIDSSG-KPA---LRVAMQT 406 (1050)
Q Consensus 342 ~~p------g~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~--~~r~l--pgrivG~s~d~~g-~~~---~~l~lqt 406 (1050)
.+. |--.||-+..+. |+++.|+. +|++.++++ +.+.+ .+..+....+..+ ... +.+.+
T Consensus 333 ~~~~r~~~~Gie~ADSit~D~HK~l~~p~~-----cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~l-- 405 (539)
T PLN02590 333 CPEYRKFIDGIENADSFNMNAHKWLFANQT-----CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISL-- 405 (539)
T ss_pred ChhhHHHhcCCccCCEEEECchhhcCcCcC-----EEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCC--
Confidence 211 223489999999 77788865 567888864 22222 1111110000000 000 11111
Q ss_pred ccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC--
Q 001579 407 REQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-- 484 (1050)
Q Consensus 407 req~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~-- 484 (1050)
-||.. + +.+-.+ +.++|.+|++++.+++.++|+++.+.|++.++|+++.++.+..|+|+...
T Consensus 406 ----sRr~r---------a-LklW~~--lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~ 469 (539)
T PLN02590 406 ----SRRFR---------S-LKLWMV--LRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVD 469 (539)
T ss_pred ----CCchH---------H-HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCC
Confidence 13321 1 122222 47899999999999999999999999999866999988878888887531
Q ss_pred ---------HHHHHHHHHHcCce-eeee--c-CCeEEEEecc-CCCHHHHHHHHHHHhC
Q 001579 485 ---------AHAIASAAYKIEMN-LRVV--D-SNTVTASFDE-TTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 485 ---------~~~i~~~L~~~GI~-~~~~--~-~~~lris~~e-~~t~edId~lv~~l~~ 529 (1050)
..++.++|.+.|.. +... . ...+|+|+.- .+|++|||.+++.+..
T Consensus 470 ~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~ 528 (539)
T PLN02590 470 GDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQK 528 (539)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 24666677666664 4322 2 2468999854 5789999999998863
No 197
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.69 E-value=8.7e-15 Score=174.07 Aligned_cols=342 Identities=13% Similarity=0.150 Sum_probs=216.4
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..+|+|.+++..++..+. ..-.+....-+. .+...++.+.|++++..+ .-.++.+||+++++++++.+|.
T Consensus 68 ~~lGh~~p~v~~Ai~~ql-~~l~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~ 138 (460)
T PRK06916 68 NVHGHQVPELDEAIREQL-NKIAHSTLLGLA--------NVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQ 138 (460)
T ss_pred hhcCCCCHHHHHHHHHHH-HhCCCccccccC--------CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHH
Confidence 357899888877776663 221111100011 123457888899987532 2347789999999999999998
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCC-----CC-------CCCHHHHHHHHH
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDA-----KG-------NINIEELRKAAE 725 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~-----~g-------~iD~e~L~~~i~ 725 (1050)
|...+|.++|++|| ...++||....+..+.|- .+..+|... .+ ..|++++++.++
T Consensus 139 ~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~ 218 (460)
T PRK06916 139 YWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLK 218 (460)
T ss_pred HHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 87666755566666 577899977655433221 233444321 01 124678888888
Q ss_pred cCCCCEEEEEEEc-C-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCc
Q 001579 726 ANRDNLSTLMVTY-P-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLH 792 (1050)
Q Consensus 726 ~~~~~taaV~vt~-P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~h 792 (1050)
++.+++++|+++. . +..|++. +.++++.++|+++|+++++|.+ +.|+.+.|.+ -+|++++ .
T Consensus 219 ~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV----~TG~GRtG~~~a~~~~gv~PDiv~~--g 292 (460)
T PRK06916 219 EKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEV----ATGFGRTGKMFACEHENVTPDIMTA--G 292 (460)
T ss_pred hCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeech----hhCCCcCchhhHHHhcCCCCCeeee--e
Confidence 7778999999986 3 4557664 2589999999999999999986 5667777743 3698876 5
Q ss_pred cccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHH
Q 001579 793 KTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEAS 872 (1050)
Q Consensus 793 Ktf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a 872 (1050)
|.++ +|.-.+|.+++++++.+.+...... . ... ...+++.|+++.++++.+.|..+..+++.
T Consensus 293 K~l~----gG~~Pi~av~~~~ei~~~~~~~~~~--~------~~~---~~~~T~~gnpl~~aaa~a~l~~l~~~~l~--- 354 (460)
T PRK06916 293 KGLT----GGYLPIAITVTTDEIYNAFYGDYEE--Q------KTF---FHGHSYTGNPLGCAVALANLELYEKTNLI--- 354 (460)
T ss_pred hhhh----cCccccceeeecHHHHHHhhccccc--c------Ccc---ccCCCCCCCHHHHHHHHHHHHHHHhccHH---
Confidence 8773 3323477888887766543211000 0 000 01112345777788888888888777655
Q ss_pred HHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEecc-cccccCCC--C-HHHHHHHHHHCCcccCCCCCCCCCE
Q 001579 873 KIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLR-GLKNTAGI--E-PEDVAKRLMDYGFHGPTMSWPVPGT 944 (1050)
Q Consensus 873 ~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~-~~~~~~g~--~-~~~vakrL~d~Gi~~~~~~~pv~~~ 944 (1050)
++...+.++|.+.|+++ ++++ ..|. |. +..+-+.-+ ..+..... . ...+.++|.++|+.+... .+.
T Consensus 355 ~~~~~~g~~l~~~l~~l~~~~~v~~vrG~-Gl-m~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~----g~~ 428 (460)
T PRK06916 355 EQVARKTEYVATQLEDLFALKHVGDIRQL-GL-MVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPL----GNT 428 (460)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEeecC-Cc-eeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEec----CCE
Confidence 34556788899988875 2222 2232 32 222222111 00000000 1 246888899999987532 478
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 945 LMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 945 lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
+++.|+..+|++|||+++++|.++++++
T Consensus 429 l~~~Ppl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 429 IVFMPPLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred EEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998764
No 198
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.69 E-value=3.7e-15 Score=172.44 Aligned_cols=296 Identities=16% Similarity=0.135 Sum_probs=190.7
Q ss_pred CcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCC---
Q 001579 180 VPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKK--- 256 (1050)
Q Consensus 180 ~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd--- 256 (1050)
.|+.+.+.+.+.. ..|+ +.-+.+.++++.+++++|.+ ++.+++|+|++...+++++ .. +||
T Consensus 25 ~~~~v~~a~~~~~---~~~~--------~~~~~~~~~~~~~a~~~g~~--~~~~~~g~t~al~~al~al-~~--~Gd~~~ 88 (363)
T TIGR01437 25 VSDEVADAQKRGA---QNYF--------EIKELVNKTGEYIANLLGVE--DAVIVSSASAGIAQSVAAV-IT--RGNRYL 88 (363)
T ss_pred CCHHHHHHHHHHH---hcCC--------CHHHHHHHHHHHHHHhhCCC--eEEEEcCHHHHHHHHHHHH-hc--CCCcch
Confidence 6666665666532 2232 12255678899999999987 4778999999988887765 22 555
Q ss_pred ------------EEEEcCCCChhHHHHHHHhccCCCeEEEEcC------chhhhc-cCCCeeEEE-EEc-CCCCeeEccH
Q 001579 257 ------------TFIIASNCHPQTIDICITRADGFDIKVVVSD------LKDIDY-KSGDVCGVL-VQY-PGTEGEVLDY 315 (1050)
Q Consensus 257 ------------~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~------~~~l~~-l~~~t~~V~-v~~-pn~~G~i~di 315 (1050)
+||++...++.+...+...+...|.++++++ ++++++ ++++|++++ +++ +|++|.+.|+
T Consensus 89 ~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~ 168 (363)
T TIGR01437 89 VENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSV 168 (363)
T ss_pred hhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCH
Confidence 7777663333222112222234577777764 456777 888898776 555 4789999999
Q ss_pred HHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecC
Q 001579 316 GDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDS 394 (1050)
Q Consensus 316 ~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~ 394 (1050)
++|+++||++|+++++++ ..+.. +....++|+|++++|+ |+|+ ||..|+++.++++++.+.....|
T Consensus 169 ~~i~~~a~~~gi~vivD~-a~~~~-~~~~~~~g~D~~~~S~~K~l~------gp~~G~l~~~~~~i~~~~~~~~~----- 235 (363)
T TIGR01437 169 EDAAQVAQEHNLPLIVDA-AAEED-LQKYYRLGADLVIYSGAKAIE------GPTSGLVLGKKKYIEWVKLQSKG----- 235 (363)
T ss_pred HHHHHHHHHcCCeEEEEC-CCCCc-hHHHHHcCCCEEEEeCCcccC------CCceEEEEEcHHHHHHHHhccCC-----
Confidence 999999999999999943 22321 1223467999999998 6564 45568888887777655321111
Q ss_pred CCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcC---
Q 001579 395 SGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG--- 471 (1050)
Q Consensus 395 ~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~--- 471 (1050)
..+. .+.+|.+ +.++.+++ .++...|.+.+.++.. ++.+++++|++++|+++..
T Consensus 236 -~~~~-------------~~~~~~~------~~gl~aAl--~~~~~~~~~~~~~~~~-~~~~l~~~L~~i~g~~~~~~~~ 292 (363)
T TIGR01437 236 -IGRA-------------MKVGKEN------ILGLTAAL--EQYLSTGKESGAEMVA-KLTPFIEALNTLKGVSASIVQD 292 (363)
T ss_pred -Ccce-------------eccCHHH------HHHHHHHH--HHHHccCcccHHHHHH-HHHHHHHHHhcCCCeEEEEecC
Confidence 0010 1123322 34444554 2333344444444443 5668999999985488762
Q ss_pred CC--Ccc--EEEEecC--C--HHHHHHHHHHcC--ceeee--ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 472 LP--FFD--TVKVKCA--D--AHAIASAAYKIE--MNLRV--VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 472 ~~--~~~--~v~i~~~--~--~~~i~~~L~~~G--I~~~~--~~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
.. .++ .++++.. + +.++.++|+++| |..+. ...+.+++++.. ++++|+|+++++|.
T Consensus 293 ~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l~ 360 (363)
T TIGR01437 293 EAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDIIVERIR 360 (363)
T ss_pred CCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHHHHHHHH
Confidence 11 122 3555542 3 789999999877 56654 246889999986 55999999999996
No 199
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.69 E-value=1.2e-14 Score=170.57 Aligned_cols=323 Identities=17% Similarity=0.168 Sum_probs=203.9
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
..+|++...+..++..+.. ...+. ...+. .+...++.+.|+++++...-.++.+||+++++++++.+|.|
T Consensus 52 ~~lGh~~p~v~~ai~~q~~-~~~~~-~~~~~--------~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~ 121 (408)
T PRK04612 52 CGLGHNDPDLVAALTEQAG-KLWHT-SNVFY--------SAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKW 121 (408)
T ss_pred ccCCCCCHHHHHHHHHHHH-hcccc-ccccC--------CHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHH
Confidence 4678888777766665532 11111 11111 12234788888888754333477899999999999999998
Q ss_pred HHhcCC-CCCCEEE-EcCCCCCccHHHHHhCCCE------------EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEE
Q 001579 672 HKARGD-HHRNVCI-IPVSAHGTNPATAAMCGMK------------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVT 737 (1050)
Q Consensus 672 ~~~~G~-~~r~~Vl-ip~saHgt~pa~a~~~G~~------------vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt 737 (1050)
...+|. .+|++|| ...++||....+....|-. ++.+++ .|++.|++.++ .+++++|+++
T Consensus 122 ~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~--~~~~aavi~e 194 (408)
T PRK04612 122 ASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-----NDVEALEAAMA--GGDVAAVMLE 194 (408)
T ss_pred HHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-----CCHHHHHHhhC--CCCEEEEEEC
Confidence 765553 2355555 5678999876654332211 122222 38899999885 2566666665
Q ss_pred cCC-Ccccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCccccccCCCCCCCc
Q 001579 738 YPS-THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPG 805 (1050)
Q Consensus 738 ~Pn-~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~hKtf~~P~g~GGPg 805 (1050)
..+ +.|++.+ .+++|.++|+++|+++++|.++ .|+.+.|.+ -+|+.++ .|+++ ||..
T Consensus 195 P~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~----tg~gr~G~~~a~~~~~~~pdi~t~--~K~l~-----~G~p 263 (408)
T PRK04612 195 PIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQ----CGMGRTGTLFAHWQEQVTPDIVTL--AKALG-----GGFP 263 (408)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCcCCchhhhhhcCCCCCEEEE--cchhc-----CCCc
Confidence 433 4456553 4999999999999999999874 445555532 2466665 58874 4566
Q ss_pred ceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHH
Q 001579 806 MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKR 885 (1050)
Q Consensus 806 ~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~ 885 (1050)
+|.+.+++++.+.+.... ..+. +.|++..++++.+.|..+.++.+. ++...+.++|.++
T Consensus 264 iga~~~~~~~~~~~~~~~--------------~~~t----~~~~p~~~aaa~a~L~~~~~~~l~---~~~~~~g~~l~~~ 322 (408)
T PRK04612 264 IGAMLAGPKVAETMQFGA--------------HGTT----FGGNPLAAAVARVALRKLASPQIA---ANVARQSAALRAG 322 (408)
T ss_pred eEEEEECHHHHhhhcCCC--------------cCCC----CCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHH
Confidence 888888877665442110 0011 223455666677778777655543 4455678888888
Q ss_pred Hhcc---CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHH
Q 001579 886 LEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDR 960 (1050)
Q Consensus 886 L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~ 960 (1050)
|+++ ++++ ..|. | .+. -+.+.+ .......++.+.|.++|+.+.... .+.+|+.|+...|++|||+
T Consensus 323 l~~l~~~~~~i~~vrg~-G-l~~--~i~~~~---~~~~~a~~i~~~l~~~Gvlv~~~g---~~~lRl~Ppl~it~eeid~ 392 (408)
T PRK04612 323 LEALNAEFGVFAQVRGR-G-LML--GAVLAP---AHAGQAGAILDLAAEHGLLLLQAG---PDVLRFVPALNLTDAELAD 392 (408)
T ss_pred HHHHHhhCCCeeeeecc-c-eEE--EEEecC---chhhHHHHHHHHHHHCCeEEeeCC---CCEEEEcCCccCCHHHHHH
Confidence 8775 3332 2221 2 221 222211 001135688899999999874322 3789999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 001579 961 YCDALISIREEIA 973 (1050)
Q Consensus 961 fv~aL~~i~~ei~ 973 (1050)
+++++.+++.++.
T Consensus 393 ~l~~l~~~l~~~~ 405 (408)
T PRK04612 393 GLARLRLALADYV 405 (408)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887654
No 200
>PRK06105 aminotransferase; Provisional
Probab=99.69 E-value=8.9e-15 Score=173.98 Aligned_cols=342 Identities=16% Similarity=0.184 Sum_probs=212.0
Q ss_pred ccccccccCcchhhhhccccccccc-cCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFA-NIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~-~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair 669 (1050)
..+|+|...+..++..+. .+..|. ....+ ..+...++.+.|+++++.+ .-.++.+||+++++++++.+|
T Consensus 60 ~~lGh~~p~i~~Ai~~q~-~~~~~~~~~~~~--------~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar 130 (460)
T PRK06105 60 VALGFSEQRLVEAAARQM-KKLPFYHTFSHK--------SHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVW 130 (460)
T ss_pred ccCCCCCHHHHHHHHHHH-HhCCCeeccccc--------CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 467888887777766653 222221 11111 1133457889999998543 223667999999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCC------C-------CCCHHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK------G-------NINIEELRKA 723 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~------g-------~iD~e~L~~~ 723 (1050)
.|...+|.++|.+|| +..++||....+..+.|. .+..++.... + ..+++++++.
T Consensus 131 ~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~ 210 (460)
T PRK06105 131 YYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEAL 210 (460)
T ss_pred HHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHH
Confidence 887666655566666 478899987554322211 2333333110 0 0125778888
Q ss_pred HHcC-CCCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeC
Q 001579 724 AEAN-RDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLN 790 (1050)
Q Consensus 724 i~~~-~~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~ 790 (1050)
+.+. .+++++|+++.- +..|++. ..++++.++|++||+++++|.+ +.|+.+.|++ -+|++++
T Consensus 211 ~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv----~tG~GRtG~~f~~~~~~v~PDi~~~- 285 (460)
T PRK06105 211 ILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEV----ICGFGRTGNMFGCETFGIKPDILVM- 285 (460)
T ss_pred HHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEecc----ccCCCcCchhhhHHhcCCCCCeeee-
Confidence 8533 367888888754 4557664 1399999999999999999986 5666666643 2688876
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ +|+-.+|.+++++++...+.... . ........+++.|+++.++++.+.|..+-++++.
T Consensus 286 -gK~lg----gG~~P~~av~~~~~i~~~~~~~~-~----------~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~- 348 (460)
T PRK06105 286 -SKQLS----SSYQPLSAVLMNEKVYDPIADES-G----------KIGTFGHGFTASGHPVAAAVALENLAIIEERDLV- 348 (460)
T ss_pred -ecccc----cCcccceEEEEcHHHHHHHhccc-c----------cCcccccCCCCCCCHHHHHHHHHHHHHHHhccHH-
Confidence 58774 44323666777777665442110 0 0000001112446777788888889888776554
Q ss_pred HHHHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEecccccc-cCC-----CCHHHHHHHHHHCCcccCCCCCC
Q 001579 871 ASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKN-TAG-----IEPEDVAKRLMDYGFHGPTMSWP 940 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~-~~g-----~~~~~vakrL~d~Gi~~~~~~~p 940 (1050)
++...+.++|.++|+++ ++++ ..|. |.. . .+++.+-+. ... ..+..+.+.+.++|+.+..
T Consensus 349 --~~v~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~-~--gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~---- 418 (460)
T PRK06105 349 --GNAAERGARLQARLRALADHPLVGEVRGV-GLI-A--AVELVADKATKTPFEPPGKVGARANAAAHEHGVISRA---- 418 (460)
T ss_pred --HHHHHHHHHHHHHHHHhhcCCCeEEEEec-ceE-E--EEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEe----
Confidence 34456788898888775 3322 1221 322 1 122211000 000 0134678888899998753
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 941 VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 941 v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
..+.++++|+...|++|||+++++|.+++.++..
T Consensus 419 ~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 419 MGDTLAFCPPLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred cCCEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 2478999999999999999999999999988744
No 201
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.69 E-value=3.5e-15 Score=174.58 Aligned_cols=298 Identities=14% Similarity=0.158 Sum_probs=189.2
Q ss_pred ccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHH----HHH--hcCCCCCCEEEEcCCCCCccHHHHHhC-
Q 001579 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRA----YHK--ARGDHHRNVCIIPVSAHGTNPATAAMC- 700 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~----y~~--~~G~~~r~~Vlip~saHgt~pa~a~~~- 700 (1050)
.|+.....++++.|++++|.+.+ +..++|-+++.+++-++-. .+. ....++.+.|+.....|.+--..+++.
T Consensus 143 ~G~~~~h~~LE~~LA~f~g~e~a-ll~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~ 221 (476)
T PLN02955 143 CGYTTYHRLLESSLADLKKKEDC-LVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAE 221 (476)
T ss_pred ccChHHHHHHHHHHHHHHCCCcE-EEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhcc
Confidence 46667778999999999999876 4557888877655544310 000 001124556777777675544445555
Q ss_pred ---CCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEecccccccccc
Q 001579 701 ---GMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1050)
Q Consensus 701 ---G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl 776 (1050)
+.+++.++. .|+++|++++++++++.+.|++..- +..|.+- ++++|.++|++||+.||||.||..+..|.
T Consensus 222 ~~~~a~~~~f~H-----ND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdia-pL~eL~~L~~~~ga~LiVDEAH~~Gv~G~ 295 (476)
T PLN02955 222 RQGNVEVFVYRH-----CDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFA-PMEELSQLRKKYGFLLVIDDAHGTFVCGE 295 (476)
T ss_pred ccCCceEEEeCC-----CCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcC-CHHHHHHHHHHcCcEEEEcccccCceecC
Confidence 577777775 5999999999877666666655432 6678887 79999999999999999999975433322
Q ss_pred CCCC---cc----cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhh
Q 001579 777 TSPG---YI----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1050)
Q Consensus 777 ~~pg---~~----GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~ 849 (1050)
.--| .+ ..|+++.++.|.|+.. .|++++++++++++... ++ +.+.++. ..
T Consensus 296 ~G~G~~e~~g~~~di~ii~~TLsKA~G~~-------GGfi~gs~~~~~~l~~~-----------~~----~~ifSta-lp 352 (476)
T PLN02955 296 NGGGVAEEFNCEADVDLCVGTLSKAAGCH-------GGFIACSKKWKQLIQSR-----------GR----SFIFSTA-IP 352 (476)
T ss_pred CCCcHHHHhCCCCCCcEEEEeCccchhcc-------CceeecHHHHHHHHHHh-----------CC----CCeeccc-cc
Confidence 1011 12 3588999999988532 36888888766654211 00 0111110 01
Q ss_pred HHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHH
Q 001579 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1050)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d 929 (1050)
+..++++.+.+..+-.+. ...++..++.+|+.+.+ .+.+ . .|. +.+-+. ....+.+++++|.+
T Consensus 353 p~~aaa~laal~l~~~~~--~~r~~L~~n~~~fr~~~--G~~~--~---sPI---~pI~ig-----~~~~a~~~~~~L~~ 415 (476)
T PLN02955 353 VPMAAAAYAAVVVARKEK--WRRKAIWERVKEFKALS--GVDI--S---SPI---ISLVVG-----NQEKALKASRYLLK 415 (476)
T ss_pred HHHHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHhc--CCCC--C---CCE---EEEEeC-----CHHHHHHHHHHHHH
Confidence 122223333344432221 23355667888888742 2332 1 122 112221 11245688999999
Q ss_pred CCcccCCCCCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 930 YGFHGPTMSWP-VP---GTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 930 ~Gi~~~~~~~p-v~---~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
+||++..+.|| |+ ..|||+++..+|++|||+++++|.++.+..
T Consensus 416 ~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 416 SGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred CCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 99999877777 33 369999999999999999999999886654
No 202
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.69 E-value=6.5e-15 Score=173.41 Aligned_cols=330 Identities=14% Similarity=0.186 Sum_probs=208.1
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..+|++..++..++..+. ....+.....+ ..+...++.+.|+++++.+ ...++.+||++++++++..+|.
T Consensus 55 ~~lGh~~p~i~~Ai~~q~-~~~~~~~~~~~--------~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~ 125 (428)
T PRK07986 55 AIHGYNHPQLNAAMKSQI-DAMSHVMFGGI--------THPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQ 125 (428)
T ss_pred hcCCCCCHHHHHHHHHHH-hhcCCcccccc--------CCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHH
Confidence 367888877776665552 22112111001 1123457888888888532 2346788999999999999998
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC-------------EEEEEcCCCC------CCCCHHHHHHHHHcCCCC
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAK------GNINIEELRKAAEANRDN 730 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~-------------~vv~V~~d~~------g~iD~e~L~~~i~~~~~~ 730 (1050)
|+..+|. +|.+|| ...++||..-.+....|- .++.++.... ..-|+++++++++++.++
T Consensus 126 ~~~~~g~-~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~ 204 (428)
T PRK07986 126 YWQAKGE-PRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHE 204 (428)
T ss_pred HHHhcCC-CCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCc
Confidence 8766653 355555 577899976544332221 1233432111 123678899999766678
Q ss_pred EEEEEEEcC-C-Cccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc------c--CcEEEeCCcccccc
Q 001579 731 LSTLMVTYP-S-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLHKTFCI 797 (1050)
Q Consensus 731 taaV~vt~P-n-~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~------G--aDv~~~~~hKtf~~ 797 (1050)
+++|+++.. . ..|++. ..+++|.++|+++|+++++|.++ .|+.+.|.+ | +|++++ .|.++
T Consensus 205 iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~----tG~GrtG~~fa~~~~gv~PDi~t~--gK~l~- 277 (428)
T PRK07986 205 IAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA----TGFGRTGKLFACEHAGIAPDILCL--GKALT- 277 (428)
T ss_pred EEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCccCCCeeeecccCCCCCEEEe--chhhh-
Confidence 888888762 4 345542 24999999999999999999874 455565532 2 688865 58773
Q ss_pred CCCCCC-CcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHH
Q 001579 798 PHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1050)
Q Consensus 798 P~g~GG-Pg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1050)
|| -.+|.+++++++.+.+.....+. . ...+++.|+++.++++.+.|..+.++++. ++..
T Consensus 278 ----gG~~p~~av~~~~~i~~~~~~~~~~~------------~-~~~~T~~g~p~~~aaa~a~L~~i~~~~~~---~~~~ 337 (428)
T PRK07986 278 ----GGTMTLSATLTTREVAETISNGEAGC------------F-MHGPTFMGNPLACAVANASLSLLESGDWQ---QQVA 337 (428)
T ss_pred ----CCcccCcchhchHHHHHHhhcCCCCc------------c-ccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHH
Confidence 44 34566677777766553210000 0 00112345677788888888888766554 4455
Q ss_pred HHHHHHHHHHhcc--CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCC
Q 001579 877 LNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTES 952 (1050)
Q Consensus 877 ~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~ 952 (1050)
.+.++|.++|+++ ++.+ ..|. |. + ..+.+.. ......+.+.|.++|+.+... .+.|++.|+..
T Consensus 338 ~~g~~l~~~l~~l~~~~~i~~vRg~-Gl-~--~~ve~~~-----~~~~~~~~~~l~~~Gl~~~~~----g~~i~~~Ppl~ 404 (428)
T PRK07986 338 AIEAQLREELAPLRDAPMVADVRVL-GA-I--GVVETTR-----PVNMAALQRFFVEQGVWIRPF----GKLIYLMPPYI 404 (428)
T ss_pred HHHHHHHHHHHHHhcCCCEEeEecc-ce-E--EEEEeCC-----cccHHHHHHHHHHCCcEEEec----CCEEEEeCCCC
Confidence 6788888888775 2221 1121 21 1 2233321 123568899999999987532 46899999999
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 001579 953 ESKEELDRYCDALISIREE 971 (1050)
Q Consensus 953 ~t~eeid~fv~aL~~i~~e 971 (1050)
.|++|||+++++|.+++.+
T Consensus 405 it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 405 ILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 9999999999999988743
No 203
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.69 E-value=1.1e-15 Score=185.84 Aligned_cols=282 Identities=11% Similarity=0.077 Sum_probs=196.3
Q ss_pred HHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHH-HHHhccCCCeEEEEcCc-
Q 001579 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDI-CITRADGFDIKVVVSDL- 288 (1050)
Q Consensus 211 e~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~-~~~~a~~~gi~v~~~~~- 288 (1050)
..+.+.|+..|+++|.+.+.. +++|+|+++.+++++.. . +||+||++++||.|+... +. ..|.+.+++.+
T Consensus 174 G~i~eAq~~AA~~fgAd~tyF-lvNGTS~gn~a~i~a~~-~--~Gd~VLvdRN~HKSv~hgaLi----LsGa~PVYl~P~ 245 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKTYF-VLNGTSASNKVVTNALL-T--PGDLVLFDRNNHKSNHHGALI----QAGATPVYLETA 245 (720)
T ss_pred hHHHHHHHHHHHHhCCCceEE-EeCChhHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHHH----HcCCeEEEeecc
Confidence 468899999999999998655 78999999999998753 2 899999999999999975 42 23667777632
Q ss_pred ------------hh-----hhc-cC---CC-------eeEEEEEcCCCCeeEccHHHHHHH-HHhCCcEEEEE----ecC
Q 001579 289 ------------KD-----IDY-KS---GD-------VCGVLVQYPGTEGEVLDYGDFIKN-AHANGVKVVMA----TDL 335 (1050)
Q Consensus 289 ------------~~-----l~~-l~---~~-------t~~V~v~~pn~~G~i~di~~I~~~-ah~~galliV~----a~~ 335 (1050)
++ +++ +. ++ .++|++|+|||+|.+.|+++|+++ +|.++ .++|+ +++
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah~ 324 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGYE 324 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhhh
Confidence 12 433 32 22 689999999999999999999999 68888 88883 222
Q ss_pred ccccC---C-CCCCcccce----EEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEeccc
Q 001579 336 LALTI---L-KPPGELGAD----IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQT 406 (1050)
Q Consensus 336 ~alg~---l-~~pg~~GaD----ivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqt 406 (1050)
..... + ....++|+| +++.|. |.++. +. +++++++++..++ |.+.|
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lT----QaS~LHvk~~~i~--------------g~~~~------ 379 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FS----QTSQIHKKDNHIK--------------GQARY------ 379 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hh----hHhhhhcCCcccc--------------ccccc------
Confidence 11121 1 122578999 999999 65543 22 4577777654321 10000
Q ss_pred ccccccccccCCCccchhHHHHHHHHHHH--HHhC-cccHHHHHHHHHHHHHHHHHHH-hcCCCEEEcCC----------
Q 001579 407 REQHIRRDKATSNICTAQALLANMAAMYA--VYHG-PEGLKTIAQRVHGLAGTFALGL-KKLGTVEVQGL---------- 472 (1050)
Q Consensus 407 req~irRekaTsnict~~~l~a~~aa~y~--~~~g-~~Gl~~ia~~~~~~a~~l~~~L-~~~G~~~l~~~---------- 472 (1050)
-.|-|...+=.-.-|+++.|.++|++-. .++- +.| +++.++..+++..+++.| +.+.+++++.+
T Consensus 380 -v~~~r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~ 457 (720)
T PRK13578 380 -CPHKRLNNAFMLHASTSPFYPLFAALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQD 457 (720)
T ss_pred -CCHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeeccccccccccccc
Confidence 0011112222223366889999999832 2332 344 567788888999999988 55544776621
Q ss_pred -------------------C------------CccE--EEEecCC--------------HHHHHHHHHHcCceeeeecCC
Q 001579 473 -------------------P------------FFDT--VKVKCAD--------------AHAIASAAYKIEMNLRVVDSN 505 (1050)
Q Consensus 473 -------------------~------------~~~~--v~i~~~~--------------~~~i~~~L~~~GI~~~~~~~~ 505 (1050)
. ..|+ ++|.+++ +..+.+.|+++||.+...+..
T Consensus 458 ~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~ 537 (720)
T PRK13578 458 YPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLN 537 (720)
T ss_pred CchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCC
Confidence 0 1243 4454443 378899998889999998889
Q ss_pred eEEEEeccCCCHHHHHHHHHHHh
Q 001579 506 TVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 506 ~lris~~e~~t~edId~lv~~l~ 528 (1050)
.+.+-++..+|++++++|+++|.
T Consensus 538 ~vL~l~s~g~t~~~~~~Lv~aL~ 560 (720)
T PRK13578 538 SILFLLTPAEDMAKLQQLVAMLA 560 (720)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999996
No 204
>PLN02880 tyrosine decarboxylase
Probab=99.69 E-value=3.6e-15 Score=178.16 Aligned_cols=360 Identities=13% Similarity=0.064 Sum_probs=211.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhcCCCc-c--ccccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHH
Q 001579 140 KFSKFDEGLTESQMIEHMQKLASMNKV-Y--KSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNF 216 (1050)
Q Consensus 140 ~lp~~~~~~sE~e~~~~~~~la~~n~~-~--~~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~ 216 (1050)
.+| +++.+-.++++++.+.-..+.. + ..|.|--.-+...|+.+.+-+.. .|-+....| +.+.+..+...+.
T Consensus 54 ~~p--~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~--~~n~~~~~~--~~sp~~~~lE~~v 127 (490)
T PLN02880 54 SAP--NQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSA--GLNIVGFSW--ITSPAATELEMIV 127 (490)
T ss_pred cCC--CCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHH--hhccCCccc--ccCcccHHHHHHH
Confidence 455 4667888999999875443322 2 22333322122233333322221 111100111 2344455666677
Q ss_pred HHHHHHhcCCCCc-------ceeEecchHHHHH-HHHHHhhhh-c--C----CCCEEEEcCCCChhHHHHHHHhccCCCe
Q 001579 217 QTMIADLTGLPMS-------NASLLDEGTAAAE-AMAMCNNIQ-K--G----KKKTFIIASNCHPQTIDICITRADGFDI 281 (1050)
Q Consensus 217 q~~ia~L~G~~~a-------nasl~d~~Taa~e-A~~la~~~~-~--~----~gd~Vlvs~~~Hps~~~~~~~~a~~~gi 281 (1050)
-+++++|+|++.. ...+++|||.+.- |+..|+... + + ++-.|++|+..|.++.+.++.+ +.|-
T Consensus 128 i~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~l--Glg~ 205 (490)
T PLN02880 128 LDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIA--GIHP 205 (490)
T ss_pred HHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHc--CCCH
Confidence 7899999999864 3567788776543 333444321 0 0 2235778999999999987643 3331
Q ss_pred -EEEEcCc----------hhhhc-cCC------CeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC
Q 001579 282 -KVVVSDL----------KDIDY-KSG------DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK 342 (1050)
Q Consensus 282 -~v~~~~~----------~~l~~-l~~------~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~ 342 (1050)
.++.++. ++|++ +.+ ...+|+.+.+ +.+|.++|+++|+++|+++|++++|++ .++.+.+.
T Consensus 206 ~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDa-A~gg~~~~ 284 (490)
T PLN02880 206 ENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDA-AYAGSACI 284 (490)
T ss_pred HHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEeh-hhHHHHHh
Confidence 1333322 34544 321 2466777877 468999999999999999999999954 23333222
Q ss_pred C-------CCcccceEEEecC-ccccccCCCCCcceEEEEEehh--hhhcCC---CcEEeEeecCCCCcceE-Eeccccc
Q 001579 343 P-------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQE--YKRMMP---GRIVGVSIDSSGKPALR-VAMQTRE 408 (1050)
Q Consensus 343 ~-------pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~--~~r~lp---grivG~s~d~~g~~~~~-l~lqtre 408 (1050)
. .+-.+||.++.+. |+++.|.+ +|++++++. +.+.+. +.+.....+..+...+. +.+
T Consensus 285 ~~~~~~~l~gie~aDSit~d~HKwl~~P~~-----~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i---- 355 (490)
T PLN02880 285 CPEYRHYIDGVEEADSFNMNAHKWFLTNFD-----CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQI---- 355 (490)
T ss_pred CHHHHHHhcCchhcCEEEECchhhcCCCcc-----EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCc----
Confidence 2 2334799999999 77777764 678998863 222221 00000000000000000 111
Q ss_pred ccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC----
Q 001579 409 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---- 484 (1050)
Q Consensus 409 q~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---- 484 (1050)
+--||. .++ .+-.+ +.++|.+|++++.++..++++++++.|++..+++++.++.++.++|+.+.
T Consensus 356 ~~~rr~---------~al-klw~~--l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~ 423 (490)
T PLN02880 356 PLGRRF---------RSL-KLWMV--LRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNN 423 (490)
T ss_pred CCCCcc---------cHH-HHHHH--HHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCC
Confidence 111221 111 11112 36899999999999999999999999988744999987777777877541
Q ss_pred -------HHHHHHHHHHcCc-eeeee--c-CCeEEEEeccCCC-HHHHHHHHHHHhC
Q 001579 485 -------AHAIASAAYKIEM-NLRVV--D-SNTVTASFDETTT-LEDVDKLFIVFAG 529 (1050)
Q Consensus 485 -------~~~i~~~L~~~GI-~~~~~--~-~~~lris~~e~~t-~edId~lv~~l~~ 529 (1050)
..++.++|.+.|. ++... . ...+|+|++-.+| .+|||++++.+..
T Consensus 424 ~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~ 480 (490)
T PLN02880 424 EDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQD 480 (490)
T ss_pred hhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 1346666665544 44332 2 3579999988866 5999999999864
No 205
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.69 E-value=4.1e-15 Score=173.45 Aligned_cols=272 Identities=20% Similarity=0.154 Sum_probs=186.0
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 290 (1050)
.++++.+|++.|.+. +.++.+|++++.++++++ .. +||+||+++..|+.+...+...++..|+++..++. ++
T Consensus 64 ~~Le~~lA~l~G~~~--al~~~sG~~Ai~~~l~al-~~--~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~ 138 (386)
T PRK06767 64 KLFEERMAVLEGGEE--ALAFGSGMAAISATLIGF-LK--AGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEAD 138 (386)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHH
Confidence 456789999999764 677888988777766665 23 89999999999999988887766778998888754 45
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ +.++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|+++.|. |.|+++ |+
T Consensus 139 l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD-~a~a~~~~~~pl~~g~Div~~S~sK~l~g~---g~ 214 (386)
T PRK06767 139 IENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVD-NTFCSPYLQRPLELGCDAVVHSATKYIGGH---GD 214 (386)
T ss_pred HHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCcEEEecCcceecCC---CC
Confidence 555 6788999999998 78999999999999999999999994 34555555566788999999997 877532 44
Q ss_pred cceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHH
Q 001579 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1050)
Q Consensus 368 P~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia 447 (1050)
+-+|+++++++.+.++- ...|+.-|+. .+++ .|+ +...+-+-+..+.
T Consensus 215 ~~gG~v~~~~~~i~~~~------------------------~~~~~~~g~~----~~~~---~a~--l~~~~L~tl~~r~ 261 (386)
T PRK06767 215 VVAGVTICKTRALAEKI------------------------RPMRKDIGGI----MAPF---DAW--LLLRGLKTLAVRM 261 (386)
T ss_pred ceeEEEEeChHHHHHHH------------------------HHHHHHhCCC----CCHH---HHH--HHHcCCCcHHHHH
Confidence 44689998877654320 0001111111 0122 122 2334444556677
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEcC-C----------CCccEEEEecCC----HHHHHHHHHHcCceeee-----------
Q 001579 448 QRVHGLAGTFALGLKKLGTVEVQG-L----------PFFDTVKVKCAD----AHAIASAAYKIEMNLRV----------- 501 (1050)
Q Consensus 448 ~~~~~~a~~l~~~L~~~G~~~l~~-~----------~~~~~v~i~~~~----~~~i~~~L~~~GI~~~~----------- 501 (1050)
++.++++.++++.|+++.+++.+. + .....|+|.+++ +.++.++|...++.++.
T Consensus 262 ~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~ 341 (386)
T PRK06767 262 DRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPA 341 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCC
Confidence 888999999999999985576432 1 112347777653 56778888766553210
Q ss_pred ----------------ecCCeEEEEeccCCCHHHHHHHHHHH
Q 001579 502 ----------------VDSNTVTASFDETTTLEDVDKLFIVF 527 (1050)
Q Consensus 502 ----------------~~~~~lris~~e~~t~edId~lv~~l 527 (1050)
+.++.||+|++.-+.++=|+.|-++|
T Consensus 342 ~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al 383 (386)
T PRK06767 342 TMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQAL 383 (386)
T ss_pred ccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHH
Confidence 12467899988654433344444444
No 206
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.69 E-value=9.1e-15 Score=156.41 Aligned_cols=325 Identities=16% Similarity=0.158 Sum_probs=216.5
Q ss_pred cccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCC-CcceeEecchHHHHHHHHHH
Q 001579 169 SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP-MSNASLLDEGTAAAEAMAMC 247 (1050)
Q Consensus 169 ~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~-~anasl~d~~Taa~eA~~la 247 (1050)
-.+|.| |..+|..|++.+-.+.. .-..||+.|=.-+.+...|-. +... .....+-.+|+.++|+++..
T Consensus 19 ~L~gPG--Psnl~~~V~~A~~~~~l-----gh~sPe~~qIm~~v~egikyV----FkT~n~~tf~isgsGh~g~E~al~N 87 (385)
T KOG2862|consen 19 TLLGPG--PSNLSGRVQEAMSRPSL-----GHMSPEFVQIMDEVLEGIKYV----FKTANAQTFVISGSGHSGWEAALVN 87 (385)
T ss_pred eeecCC--CcCCCHHHHHhhcCCcc-----ccCCHHHHHHHHHHHHHHHHH----hccCCCceEEEecCCcchHHHHHHh
Confidence 367888 55689988854443332 223677655444444443333 2222 12344557889999987754
Q ss_pred hhhhcCCCCEEEEcC-CCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cC-CCeeEEEEEcC-CCCeeEcc-
Q 001579 248 NNIQKGKKKTFIIAS-NCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KS-GDVCGVLVQYP-GTEGEVLD- 314 (1050)
Q Consensus 248 ~~~~~~~gd~Vlvs~-~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~-~~t~~V~v~~p-n~~G~i~d- 314 (1050)
. +. +||+|++-. +.+.+...-+ ++++|++|.+++. +++.+ +. -..++|+|++. +.+|++.|
T Consensus 88 ~-le--Pgd~vLv~~~G~wg~ra~D~---~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~ 161 (385)
T KOG2862|consen 88 L-LE--PGDNVLVVSTGTWGQRAADC---ARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDL 161 (385)
T ss_pred h-cC--CCCeEEEEEechHHHHHHHH---HHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchH
Confidence 3 22 899888655 5665544433 4567888888743 34443 43 35678888876 78999999
Q ss_pred HHHHHHHHHhCCcEEEEEecCccccCCC-CCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEee
Q 001579 315 YGDFIKNAHANGVKVVMATDLLALTILK-PPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1050)
Q Consensus 315 i~~I~~~ah~~galliV~a~~~alg~l~-~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~ 392 (1050)
++.+.++||+++++++|++ ..|+|... .-.+||+|++...+ |.++.| ||++++..+++.+.++-.|--+
T Consensus 162 ~~~~g~lc~k~~~lllVD~-VaSlggt~F~mDewgVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~~--- 232 (385)
T KOG2862|consen 162 LAISGELCHKHEALLLVDT-VASLGGTEFEMDEWGVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKTK--- 232 (385)
T ss_pred HHHHHHHhhcCCeEEEEec-hhhcCCccceehhhcccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccCC---
Confidence 7888899999999999954 44777543 34799999988887 778877 5678899999887777443211
Q ss_pred cCCCCcceEEeccccccc------ccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001579 393 DSSGKPALRVAMQTREQH------IRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1050)
Q Consensus 393 d~~g~~~~~l~lqtreq~------irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~ 466 (1050)
...|+++.-.+-+. .|+...|..| |.++++.+|+ +.+-++||+++.+|+.+++++++..|+++|
T Consensus 233 ----~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv---~lly~Lr~AL--~~I~eeGL~~~~~rH~e~s~~l~~~l~~~G- 302 (385)
T KOG2862|consen 233 ----PVSFYFDILRLGNFWGCDGEPRAYHHTPPV---QLLYSLRAAL--ALIAEEGLENSWRRHREMSKWLKLSLEALG- 302 (385)
T ss_pred ----ceEEEEeHHhhcchhccCCcccccccCCcH---HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 11233332111111 1455566666 8999999997 677789999999999999999999999998
Q ss_pred EEEcC--C-CCccEE-EEecCC---HHHHHHHHHHc-Cceee----eecCCeEEEEecc-CCCHHHHHHHHHHHhC
Q 001579 467 VEVQG--L-PFFDTV-KVKCAD---AHAIASAAYKI-EMNLR----VVDSNTVTASFDE-TTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 467 ~~l~~--~-~~~~~v-~i~~~~---~~~i~~~L~~~-GI~~~----~~~~~~lris~~e-~~t~edId~lv~~l~~ 529 (1050)
+++.. + ...+++ ++.++. ..+|+..+..+ ++.+. ...+..+||.+.- .-+.+-|+..++.|+.
T Consensus 303 Lq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~ 378 (385)
T KOG2862|consen 303 LQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKL 378 (385)
T ss_pred ccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHH
Confidence 88752 2 333332 334442 67888888776 55542 2345668887654 4577888888888863
No 207
>PRK15029 arginine decarboxylase; Provisional
Probab=99.69 E-value=4.8e-15 Score=181.96 Aligned_cols=306 Identities=13% Similarity=0.106 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~ 712 (1050)
.+.|.|+..++++|.+.+.|.+|+++.|+.++++++. .++++||++.+.|-+....+.+.|++.+++....+
T Consensus 206 ~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~--------~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~ 277 (755)
T PRK15029 206 AFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACM--------TDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRN 277 (755)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeEEEeccccc
Confidence 3889999999999999988899999988877766543 25689999999999888889999999999964322
Q ss_pred -----CCCC-----HHHHHHHHHcCCCCEE--------EEEEEcCCCccccccCHHHHHHHHHHcCCEEEEecccccccc
Q 001579 713 -----GNIN-----IEELRKAAEANRDNLS--------TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV 774 (1050)
Q Consensus 713 -----g~iD-----~e~L~~~i~~~~~~ta--------aV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~ 774 (1050)
|.++ ++.++++|+++ ++.+ ++++|+|++.|++. |+++|+++||++|+.|+||.|+...+
T Consensus 278 ~~Gi~~~i~~~~~~~e~i~~~l~~~-p~~k~~~~~~~~avvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhGah~- 354 (755)
T PRK15029 278 RYGIIGPIYPQEMQPETLQKKISES-PLTKDKAGQKPSYCVVTNCTYDGVCY-NAKEAQDLLEKTSDRLHFDEAWYGYA- 354 (755)
T ss_pred ccCCccCCCccccCHHHHHHHHHhC-chhhhccccCceEEEEECCCCcceee-CHHHHHHHHHhcCCeEEEECcccccc-
Confidence 4566 99999999876 3344 89999999999998 89999999999999999999874221
Q ss_pred ccCC--CC---------c-ccCc-EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCC
Q 001579 775 GLTS--PG---------Y-IGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1050)
Q Consensus 775 gl~~--pg---------~-~GaD-v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~ 841 (1050)
+|.. |. . .|+| +++-|.||+++.- -..+.|-++.. .+.+.-..+...- .-...
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~al-----TQaS~LHv~~~-~~~id~~r~~~~l--------~~~qS 420 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNAL-----SQASYIHVREG-RGAINFSRFNQAY--------MMHAT 420 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccch-----hhhhhheeCCC-ccccCHHHHHHHH--------HHHcC
Confidence 2211 21 2 6899 9999999999532 12234444332 0011100000000 00011
Q ss_pred CCcchhhhHHHHHHHHHHHHH-HChhhHHHHHHHHHHHHHHHHHHHhccCC-----------------------------
Q 001579 842 IAAAPWGSALILPISYTYIAM-MGSKGLTEASKIAILNANYMAKRLEKHYP----------------------------- 891 (1050)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~-lG~eGl~~~a~~~~~~a~yl~~~L~~~~~----------------------------- 891 (1050)
+|. .|-....+-.|-.+|.. .|.+ ..+..+..+..++++|.++..
T Consensus 421 TSP-SY~LmASLD~ar~~m~~~~G~~----l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 495 (755)
T PRK15029 421 TSP-LYAICASNDVAVSMMDGNSGLS----LTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDF 495 (755)
T ss_pred CCc-HHHHHHHHHHHHHHHhhhhhHH----HHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccc
Confidence 121 12222223334444433 3333 334455666777777754311
Q ss_pred ---------------eeecCCC--C-------c---cceeEEEeccccc-----ccCCCCHHHHHHHHHHCCcccCCCCC
Q 001579 892 ---------------ILFRGVN--G-------T---VAHEFIVDLRGLK-----NTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1050)
Q Consensus 892 ---------------v~~~g~~--g-------~---~~~e~i~~~~~~~-----~~~g~~~~~vakrL~d~Gi~~~~~~~ 939 (1050)
++-++.. | . ..--+++.++.++ .+.|+++..+.+.|.++||.+-..+
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~- 574 (755)
T PRK15029 496 ADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTT- 574 (755)
T ss_pred cccchhhhccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecC-
Confidence 0100000 0 0 0011334432211 1234566699999999999875433
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 940 PVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 940 pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
..++.+-++...|++++++++++|.++.+.
T Consensus 575 --~~~vL~l~s~g~t~~~~~~L~~aL~~~~~~ 604 (755)
T PRK15029 575 --DFQIMFLFSMGVTRGKWGTLVNTLCSFKRH 604 (755)
T ss_pred --CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 356777788889999999999999988543
No 208
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.68 E-value=7.5e-15 Score=171.55 Aligned_cols=298 Identities=14% Similarity=0.135 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~ 712 (1050)
...++++.+++++|.+.+ +..++|..+..+++.++. .++|+||+++..|++....+.+.+.+++.++..
T Consensus 44 ~~~~LE~~lA~~~g~e~a-l~~~sG~~a~~~~i~~l~--------~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-- 112 (392)
T PLN03227 44 AHLELEQCMAEFLGTESA-ILYSDGASTTSSTVAAFA--------KRGDLLVVDRGVNEALLVGVSLSRANVRWFRHN-- 112 (392)
T ss_pred HHHHHHHHHHHHhCCCcE-EEecCcHHHHHHHHHHhC--------CCCCEEEEeccccHHHHHHHHHcCCeEEEeCCC--
Confidence 466899999999999854 555667655534443321 256899999998877655567788888887763
Q ss_pred CCCCHHHHHHHHHcC-----------CCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCC
Q 001579 713 GNINIEELRKAAEAN-----------RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1050)
Q Consensus 713 g~iD~e~L~~~i~~~-----------~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg 780 (1050)
|++++++.++.. .++++.|+++.+ |..|.+. |+++|+++|+++|+++++|+++.. +.+.+.|
T Consensus 113 ---d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~-~l~~i~~l~~~~g~~livDe~~~~--g~~g~~G 186 (392)
T PLN03227 113 ---DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLA-PLKELVALKEEFHYRLILDESFSF--GTLGKSG 186 (392)
T ss_pred ---CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCccc-CHHHHHHHHHHcCCEEEEECcccc--cccCCCC
Confidence 555555544321 246888888887 5678887 799999999999999999998752 2222211
Q ss_pred -----------cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhh
Q 001579 781 -----------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1050)
Q Consensus 781 -----------~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~ 849 (1050)
..|+|+++++++|.+ ||.+|++++++++...+... +. + .+...+. +
T Consensus 187 ~g~~~~~g~~p~~~~Div~~slsk~~-------g~~gg~v~~~~~~~~~~~~~--~~-------~---~~~~~~~----~ 243 (392)
T PLN03227 187 RGSLEHAGLKPMVHAEIVTFSLENAF-------GSVGGMTVGSEEVVDHQRLS--GS-------G---YCFSASA----P 243 (392)
T ss_pred CcHHHHcCCCCCCCceEEEeechhhh-------hccCcEEecCHHHHHHHHHh--Cc-------C---ccccCCC----C
Confidence 246799999988866 35567787777655433100 00 0 0000010 1
Q ss_pred HHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeee--cCC----CCccceeEEEecccccccC----CC
Q 001579 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILF--RGV----NGTVAHEFIVDLRGLKNTA----GI 918 (1050)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~--~g~----~g~~~~e~i~~~~~~~~~~----g~ 918 (1050)
+..+.++.+.+..+-. ..+..++..+++++|+++|++. ++... .|. .....+.+.+.+.+.+... ..
T Consensus 244 p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~ 321 (392)
T PLN03227 244 PFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETL 321 (392)
T ss_pred HHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhh
Confidence 1122222222322111 1234556678899999999753 32110 000 0001111233332110000 00
Q ss_pred CHHHHHHHHHHCCcccCCC------CCC-C-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 919 EPEDVAKRLMDYGFHGPTM------SWP-V-PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 919 ~~~~vakrL~d~Gi~~~~~------~~p-v-~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
...++.++|.++|+.+... .+| + +..+|++++..+|+||||+++++|+++++++
T Consensus 322 ~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~ 383 (392)
T PLN03227 322 ILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 1258899999999986321 112 1 4789999999999999999999999998775
No 209
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.68 E-value=1.6e-14 Score=171.20 Aligned_cols=330 Identities=17% Similarity=0.195 Sum_probs=201.1
Q ss_pred cccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhh-C-CCeeeeccCchHHHHHHHHHHH
Q 001579 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT-G-FDSFSLQPNAGAAGEYAGLMVI 668 (1050)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~-G-~d~~~l~~~sGa~ge~a~Llai 668 (1050)
...||++...+..++..+. ....+.....+. .+...++.+.|++++ + .+. .++.+||++++++++.++
T Consensus 54 ~~~lGh~~p~v~~a~~~q~-~~~~~~~~~~~~--------~~~~~~la~~L~~~~~~~~~~-v~f~~SGseA~e~AlklA 123 (433)
T PRK08117 54 VANVGHRHPKVVQAIKEQA-DKLMHGPSGVIY--------YESILKLAEELAEITPGGLDC-FFFSNSGAEAIEGALKLA 123 (433)
T ss_pred hccCCCCCHHHHHHHHHHH-HhccCccccccC--------CHHHHHHHHHHHHhCCCCCCE-EEEeCcHHHHHHHHHHHH
Confidence 3468888887777766653 211111100011 133568889999998 3 333 466799999999998888
Q ss_pred HHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCC--------C-----EEEEEcCCCCCC------------CCHHHHHHH
Q 001579 669 RAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG--------M-----KIVSVGTDAKGN------------INIEELRKA 723 (1050)
Q Consensus 669 r~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G--------~-----~vv~V~~d~~g~------------iD~e~L~~~ 723 (1050)
|.| .| +++.|.+..++||....+..+.+ . .+..+|...... .|+++|++.
T Consensus 124 r~~---tg--r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 198 (433)
T PRK08117 124 KHV---TK--RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESL 198 (433)
T ss_pred HHh---cC--CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHH
Confidence 876 22 33344467789998766533211 0 134444422111 267788888
Q ss_pred HHc--CCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCc------cc--CcEEEe
Q 001579 724 AEA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHL 789 (1050)
Q Consensus 724 i~~--~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~------~G--aDv~~~ 789 (1050)
+++ ..+++++|+++.. +..|++.+ .+++|.++|++||+++++|.++ .|+.+.|. +| +|+.++
T Consensus 199 ~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~----tG~gr~G~~~~~~~~gv~pDi~t~ 274 (433)
T PRK08117 199 FKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQ----TGFGRTGEWFAAQTFGVVPDIMTI 274 (433)
T ss_pred HHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecch----hccCccccchhHhhcCCCCCEeeh
Confidence 864 2467888887753 45677751 2999999999999999999875 34545442 23 576544
Q ss_pred CCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHH
Q 001579 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1050)
Q Consensus 790 ~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1050)
.|+++ ||-.+|.+++++++...+..... +. ++.|++..++++.+.+..+..+++.
T Consensus 275 --sK~lg-----~G~pigav~~~~~i~~~~~~~~~---------------~~---T~~~np~~~aaa~a~L~~l~~~~l~ 329 (433)
T PRK08117 275 --AKGIA-----SGLPLSAVVASKELMEQWPLGSH---------------GT---TFGGNPVACAAALATLEVIKEEKLL 329 (433)
T ss_pred --hhhcc-----CCCcceeEEEcHHHHhhccCCCC---------------CC---CCCcCHHHHHHHHHHHHHHHhccHH
Confidence 58774 34457788888777654421100 01 1224555666677777777555544
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEecccccc-cCCCCHHHHHHHHHHCCcccCCCCCCCCC
Q 001579 870 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN-TAGIEPEDVAKRLMDYGFHGPTMSWPVPG 943 (1050)
Q Consensus 870 ~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~-~~g~~~~~vakrL~d~Gi~~~~~~~pv~~ 943 (1050)
+ +...+.+++.++|+++ +.+. ..|. | .+ +-+.+.+-+. ........+.+.|.++|+.+.... +..+
T Consensus 330 ~---~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G-l~--~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~~~ 401 (433)
T PRK08117 330 D---NANEMGAYALERLEVLKEKHPVIGDVRGI-G-LM--IGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCG-NAGN 401 (433)
T ss_pred H---HHHHHHHHHHHHHHHHHhcCCceeeeecC-C-cE--EEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecC-CCCC
Confidence 3 3446678888888764 3322 1121 2 21 1222211000 001124568888999998764322 1247
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 944 TLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 944 ~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
.+|++|+..+|++|||+++++|.+++.++
T Consensus 402 ~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 402 VLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred EEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999988765
No 210
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.68 E-value=1e-14 Score=170.37 Aligned_cols=303 Identities=15% Similarity=0.123 Sum_probs=190.5
Q ss_pred cccHHHHHHHHHHHHHHhhCCC---eeeeccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCC
Q 001579 627 AQGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~d---~~~l~~~sGa~-ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~ 702 (1050)
.+|..++.+.+++++++.+|.+ ...+..++|++ |.. .+++.+. .++++|++++..+..+...+...|+
T Consensus 64 ~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~---~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 135 (389)
T PRK05957 64 VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFM---NAILAIT-----DPGDEIILNTPYYFNHEMAITMAGC 135 (389)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHH---HHHHHhc-----CCCCEEEEeCCCCcCHHHHHHhcCC
Confidence 4688888999999999998874 23344555543 332 2333321 2457899988777667666788999
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc--c
Q 001579 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--L 776 (1050)
Q Consensus 703 ~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~g--l 776 (1050)
+++.++.+.++.+|+++|+++++ +++++|++++| |.+|.+. +++++|+++|+++|+++++|.++..- ... .
T Consensus 136 ~~~~v~~~~~~~~d~~~l~~~i~---~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~ 212 (389)
T PRK05957 136 QPILVPTDDNYQLQPEAIEQAIT---PKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKH 212 (389)
T ss_pred EEEEeecCCCCCcCHHHHHHhcC---cCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCc
Confidence 99999998778899999999996 68999999999 4689875 24999999999999999999985311 111 0
Q ss_pred CCC----CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 777 TSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 777 ~~p----g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
..+ ....--|++.++.|.|+.| |.++|++++++++.+.+.... .+...+.+...+..
T Consensus 213 ~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~q~~- 273 (389)
T PRK05957 213 FSPGSIPGSGNHTISLYSLSKAYGFA----SWRIGYMVIPIHLLEAIKKIQ--------------DTILICPPVVSQYA- 273 (389)
T ss_pred cChhhCCCccCcEEEEecchhhccCc----cceeEEEecCHHHHHHHHHHH--------------hhcccCCCcHHHHH-
Confidence 011 1112236677788988533 567999999877665543110 00011111112221
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCe-eecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HC
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPI-LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v-~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~ 930 (1050)
+..++. -+.+-+++..+...++.+++.+.|+++-.+ .+..+.+.++ +.++++ .+++..+++++|. ++
T Consensus 274 ---~~~~l~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~--~~~~~~-----~~~~~~~~~~~l~~~~ 342 (389)
T PRK05957 274 ---ALGALQ-VGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFY--CFLKVN-----TDLNDFELVKQLIREY 342 (389)
T ss_pred ---HHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEE--EEEeCC-----CCCChHHHHHHHHHHC
Confidence 112221 122234555555667778888888764221 1111222121 345554 2467889999987 58
Q ss_pred CcccCC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 931 GFHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 931 Gi~~~~-~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
||.+.. ..|. ..+.+||++.. .+++++++.++.|.+.+++
T Consensus 343 gv~v~pg~~f~~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 343 RVAVIPGTTFGMKNGCYLRIAYGA-LQKATAKEGIERLVQGLKT 385 (389)
T ss_pred CEEEccchhhCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence 998643 2242 24589999854 3567777777777666554
No 211
>PRK06917 hypothetical protein; Provisional
Probab=99.68 E-value=2e-14 Score=170.40 Aligned_cols=342 Identities=16% Similarity=0.164 Sum_probs=215.2
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..||+|..++..++..+. ....+.....+.. +...++.+.|++++..+ .-.++.++|+++++++++.+|.
T Consensus 43 ~~lGh~hp~v~~Ai~~ql-~~~~~~~~~~~~~--------~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~ 113 (447)
T PRK06917 43 AGIGHGVKEIADAIKEQA-EEVSFVYRSQFTS--------EPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQ 113 (447)
T ss_pred ccCCCCCHHHHHHHHHHH-hhCcCccccccCC--------HHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHH
Confidence 468999888887776663 2222221111211 33457889999998643 2346789999999999999998
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCC-----C-------CCCHHHHHHHHH
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----G-------NINIEELRKAAE 725 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~-----g-------~iD~e~L~~~i~ 725 (1050)
|+..+|.++|++|+ ...++||....+..+.|. .+..++.... + .-|++.+++.++
T Consensus 114 ~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~ 193 (447)
T PRK06917 114 HFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIE 193 (447)
T ss_pred HHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 87777766677776 466899988766543321 1222321110 0 013577888887
Q ss_pred cCC-CCEEEEEEEcCC--Cccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCC
Q 001579 726 ANR-DNLSTLMVTYPS--THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNL 791 (1050)
Q Consensus 726 ~~~-~~taaV~vt~Pn--~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~ 791 (1050)
+++ +++++|+++... ..|++. ..++++.++|+++|+++++|.+ +.|+.+.|.+ -+|++++
T Consensus 194 ~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv----~tGfGRtG~~~a~~~~gv~PDi~~~-- 267 (447)
T PRK06917 194 RIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEV----MTGLGRTGAMFAMEHWGVEPDIMTL-- 267 (447)
T ss_pred hcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEech----hhCcCcccchhhHHhcCCCCCEEEe--
Confidence 654 579999988532 234553 2589999999999999999986 4567677643 2688877
Q ss_pred ccccccCCCCCC-CcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 792 HKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 792 hKtf~~P~g~GG-Pg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ +|- | +|.+++++++...+.... + .. ...+++.|+++.++++.+.|..+..+++.
T Consensus 268 gK~l~----~G~~P-i~a~~~~~~i~~~~~~~~-----------~--~~-~~~~T~~gnpl~~aaa~a~l~~l~~~~l~- 327 (447)
T PRK06917 268 GKGLG----AGYTP-IAATVVSDRVMEPILRGS-----------R--SI-MSGHTLSANPLSAATALAVLEYMEKHNLP- 327 (447)
T ss_pred eehhc----cCCcc-eEEEEEcHHHHHHHhccC-----------c--cc-ccccCCCCCHHHHHHHHHHHHHHHHCCHH-
Confidence 58773 332 4 667777777665442100 0 00 00112446777788888999888766654
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEecc--cccccCC----CCHHHHHHHHHHCCcccCCCCC
Q 001579 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLR--GLKNTAG----IEPEDVAKRLMDYGFHGPTMSW 939 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~--~~~~~~g----~~~~~vakrL~d~Gi~~~~~~~ 939 (1050)
++...+.++|.++|+++ ++++ ..|. |.. +-+.+. +...+.. .....+.+.|.++|+.+.....
T Consensus 328 --~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~---~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~ 401 (447)
T PRK06917 328 --EKAAEKGEYLIKGLQKVQQQSTIIGDVRGK-GLL---IGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVA 401 (447)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCCEEEEeec-ceE---EEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEeccc
Confidence 34456778888888775 3332 1221 222 122221 0000000 0135677888999998742210
Q ss_pred ----CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 940 ----PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 940 ----pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
+..+.++++|+..+|++|||+++++|.+++.++.+
T Consensus 402 ~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 402 GQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred ccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 11468999999999999999999999999988633
No 212
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.68 E-value=1.9e-14 Score=168.61 Aligned_cols=292 Identities=16% Similarity=0.253 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHh-cCC-CCCCEEE-EcCCCCCccHHHHHhCCCE------
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKA-RGD-HHRNVCI-IPVSAHGTNPATAAMCGMK------ 703 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~-~G~-~~r~~Vl-ip~saHgt~pa~a~~~G~~------ 703 (1050)
...++++.+++++|++.+ ++.+||+.++++++..++.|+.. +|. ..+++|| +..+.||.........+-.
T Consensus 74 ~~~~~~~~l~~~~~~~~~-~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~ 152 (400)
T PTZ00125 74 VLGLAEKYITDLFGYDKV-LPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNF 152 (400)
T ss_pred HHHHHHHHHHhCCCCCEE-EEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccC
Confidence 567889999999998765 56789999999888888765422 222 1234454 5678898776654433211
Q ss_pred ------EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccC---HHHHHHHHHHcCCEEEEeccccccc
Q 001579 704 ------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQ 773 (1050)
Q Consensus 704 ------vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~d---i~eI~~la~~~G~~v~vD~A~~~al 773 (1050)
++.++. .|+++|++.++ .+++++|+++.+ |.+|++.++ +++|.++|++||+++++|+++.
T Consensus 153 ~~~~~~~~~~~~-----~d~~~le~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~--- 222 (400)
T PTZ00125 153 GPFVPGFELVDY-----NDVEALEKLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQT--- 222 (400)
T ss_pred CCCCCCceEeCC-----CCHHHHHHHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc---
Confidence 122222 48999999996 367999988776 567887622 9999999999999999998752
Q ss_pred cccCCCC--------cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcc
Q 001579 774 VGLTSPG--------YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1050)
Q Consensus 774 ~gl~~pg--------~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa 845 (1050)
++.+.| ...+|++++ .|+|+ +|++++|++++++++...+..... . ....
T Consensus 223 -g~g~~G~~~~~~~~~~~pd~~~~--sK~l~----~g~~~ig~v~~~~~~~~~~~~~~~------------~--~t~~-- 279 (400)
T PTZ00125 223 -GLGRTGKLLAHDHEGVKPDIVLL--GKALS----GGLYPISAVLANDDVMLVIKPGEH------------G--STYG-- 279 (400)
T ss_pred -CCCccchhhHHHhcCCCCCEEEE--ccccc----CCCcCcEEEEEcHHHHhhccCCCC------------C--CCCC--
Confidence 232222 123688876 49885 455689999999887765532100 0 0111
Q ss_pred hhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEecccccccCCCCH
Q 001579 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEP 920 (1050)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~ 920 (1050)
+++..++++.+.+..+..+++.+. ...+.+++.++|++. .... ..+ .|.+ +.+.++. ..+.+.
T Consensus 280 --~~~~~~~aa~~~l~~i~~~~~~~~---~~~~~~~l~~~l~~l~~~~~~~~~~~~-~g~~---~~v~~~~---~~~~~~ 347 (400)
T PTZ00125 280 --GNPLACAVAVEALEVLKEEKLAEN---AQRLGEVFRDGLKELLKKSPWVKEIRG-KGLL---NAIVFDH---SDGVNA 347 (400)
T ss_pred --cCHHHHHHHHHHHHHHHhcCHHHH---HHHHHHHHHHHHHHHHhcCCCeEEEec-ccEE---EEEEEcc---CcchHH
Confidence 223334445555666554555433 334677888888764 2221 111 1222 2233321 012456
Q ss_pred HHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 921 EDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 921 ~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
.+++++|.++|+.+.... .+.|||+|+...+++|||++++.|.+++.++.
T Consensus 348 ~~~~~~l~~~Gv~v~~~~---~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 348 WDLCLKLKENGLLAKPTH---DNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred HHHHHHHHHCCeEEeecC---CCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 789999999998874222 47899999988999999999999999887653
No 213
>PRK07483 hypothetical protein; Provisional
Probab=99.68 E-value=2.4e-14 Score=169.56 Aligned_cols=343 Identities=16% Similarity=0.176 Sum_probs=215.5
Q ss_pred cccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHH
Q 001579 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVI 668 (1050)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llai 668 (1050)
...+|+|..++..++..+. ....+....-+. .+...++.+.|++++. ++.+ ++.+||+++++++++.+
T Consensus 41 ~~~lGh~~p~v~~av~~ql-~~~~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~v-~f~~sGsEAve~AlklA 110 (443)
T PRK07483 41 VSCLGHSHPRVIAAIHAQI-DRLAYAHTSFFT--------TEPAEALADRLVAAAPAGLEHV-YFVSGGSEAVEAALKLA 110 (443)
T ss_pred hhccCCCCHHHHHHHHHHH-HhccCccccccC--------CHHHHHHHHHHHHhCCCCCCEE-EEcCCcHHHHHHHHHHH
Confidence 3468888888877766653 222221110011 1234578889999874 4444 66899999999999999
Q ss_pred HHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCCCC-C------------CHHHHHH
Q 001579 669 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGN-I------------NIEELRK 722 (1050)
Q Consensus 669 r~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~g~-i------------D~e~L~~ 722 (1050)
|.|...+|.++|.+|| ...++||....+..+.|- .+..++.....+ . .+++|++
T Consensus 111 r~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 190 (443)
T PRK07483 111 RQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEA 190 (443)
T ss_pred HHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHH
Confidence 9987666655566666 477999987665433221 123333211001 0 1367777
Q ss_pred HHHc-CCCCEEEEEEEcCC--Ccccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEE
Q 001579 723 AAEA-NRDNLSTLMVTYPS--THGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCH 788 (1050)
Q Consensus 723 ~i~~-~~~~taaV~vt~Pn--~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~ 788 (1050)
++.+ +.+++++|+++.-. ..|++.+ .+++|.++|++||+++|+|.+ +.|+.+.|.+ -+|+++
T Consensus 191 ~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~ 266 (443)
T PRK07483 191 KILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEV----MCGMGRTGTLFACEEDGVAPDLVT 266 (443)
T ss_pred HHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecc----eeCcccCcHHHHHhhcCCCCCeee
Confidence 6653 34689999987543 2466642 499999999999999999986 6777788753 368988
Q ss_pred eCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhH
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1050)
+ .|.++ +|--.+|.+.+++++.+.+.... ... ...+++.|+++.++++.+.|..+-++++
T Consensus 267 ~--gK~l~----gG~~Pi~av~~~~~i~~~~~~~~-------------~~~-~h~~T~~gnpl~~aaa~a~l~~i~~~~l 326 (443)
T PRK07483 267 I--AKGLG----AGYQPIGAVLASDRIYDAIADGS-------------GFF-QHGHTYLGHATACAAALAVQRVIAEDGL 326 (443)
T ss_pred e--hhhhc----cCccccEEEEEcHHHHHHHhcCC-------------Ccc-ccCCCCCCCHHHHHHHHHHHHHHHhcCH
Confidence 7 58774 33224778888887765543110 000 0112245677788888899998877765
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccc---cccc--CC-CCHHHHHHHHHHCCcccCCC
Q 001579 869 TEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG---LKNT--AG-IEPEDVAKRLMDYGFHGPTM 937 (1050)
Q Consensus 869 ~~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~---~~~~--~g-~~~~~vakrL~d~Gi~~~~~ 937 (1050)
.+. .....++|.++|++. ++++ ..|. |.. . -+++.. .+.. .. .....+.+++.++|+.+...
T Consensus 327 ~~~---~~~~g~~l~~~L~~l~~~~~~i~~vRG~-Glm-~--gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~ 399 (443)
T PRK07483 327 LAN---VRARGEQLRARLRERLGQHPHVGDIRGR-GLF-V--GVELVADRATKAPFDPALKLHARIKREAMARGLMVYPM 399 (443)
T ss_pred HHH---HHHHHHHHHHHHHHHHhcCCCeeeEeec-ccE-E--EEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEec
Confidence 543 446778888888763 3322 2232 322 1 122210 0000 00 01356888899999987422
Q ss_pred CC----CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 938 SW----PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 938 ~~----pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
.. +.+++||+.|+...|++|||+++++|.+++.++..
T Consensus 400 ~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 400 GGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11 11468999999999999999999999999987654
No 214
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.68 E-value=1.9e-14 Score=168.99 Aligned_cols=288 Identities=16% Similarity=0.187 Sum_probs=183.9
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC-----------
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG----------- 701 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G----------- 701 (1050)
..++.+.|+++.+.+.+ ++.+||++++++++..+|.|...++..++++|+ +..++||.......+.|
T Consensus 84 ~~~l~~~l~~~~~~~~~-~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~ 162 (403)
T PRK05093 84 ALRLAKKLIDATFAERV-FFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPK 162 (403)
T ss_pred HHHHHHHHHhhCCCCEE-EEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCC
Confidence 34888999999877654 667899999999999888875433222344444 67789998764432211
Q ss_pred -CEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCC-ccccc---cCHHHHHHHHHHcCCEEEEecccccccccc
Q 001579 702 -MKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGL 776 (1050)
Q Consensus 702 -~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~-~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl 776 (1050)
.+++.++. .|+++++++++ +++++|+++..+. .|++. +.+++|+++|++||+++++|.++. ++
T Consensus 163 ~~~~~~~~~-----~d~~~l~~~l~---~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~----g~ 230 (403)
T PRK05093 163 PADITHVPF-----NDLAAVKAVID---DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT----GM 230 (403)
T ss_pred CCCcEEeCC-----CCHHHHHHHhc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh----CC
Confidence 12344443 38999999996 6899999985443 45552 249999999999999999998854 23
Q ss_pred CCCC------cc--cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhh
Q 001579 777 TSPG------YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1050)
Q Consensus 777 ~~pg------~~--GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g 848 (1050)
.+.| .+ .+|+.++ .|+++ +|..+|++++++++.+.+..... . ...+ +
T Consensus 231 g~~g~~~~~~~~~~~pdi~s~--sK~l~-----~G~rig~vv~~~~i~~~l~~~~~-------------~-~t~~----~ 285 (403)
T PRK05093 231 GRTGDLFAYMHYGVTPDILTS--AKALG-----GGFPIGAMLTTAEIASHFKVGTH-------------G-STYG----G 285 (403)
T ss_pred CCCccchhhhhcCCCCCEEEe--ccccc-----CCcceEEEEEcHHHHhhcCCCCC-------------C-CCCC----C
Confidence 2222 12 3676554 58874 46789999998887766532100 0 1112 2
Q ss_pred hHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc---CCeeecCC-CCccceeEEEecccccccCCCCHHHHH
Q 001579 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVA 924 (1050)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~v~~~g~-~g~~~~e~i~~~~~~~~~~g~~~~~va 924 (1050)
++..+.++.+.+..+-.+.+. ++...+.+++.++|+++ +.+...-+ .|.. +.+.+.+ .......+++
T Consensus 286 ~~~~~~aa~a~L~~~~~~~~~---~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~---~~~~l~~---~~~~~~~~~~ 356 (403)
T PRK05093 286 NPLACAVAEAVFDIINTPEVL---EGVKARRQRFVDGLQKINQKYGVFSEIRGMGLL---IGAELKP---QYKGRARDFL 356 (403)
T ss_pred CHHHHHHHHHHHHHHhhccHH---HHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceE---EEEEecC---cchhHHHHHH
Confidence 333333444545554333333 44556788899999875 22211100 1211 2333321 0001356899
Q ss_pred HHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 925 KRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 925 krL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
++|.++|+.+.... .+.+|++|+..++++|||++++.|.+++.+
T Consensus 357 ~~l~~~Gv~v~~~g---~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 357 NAAAEEGVMVLVAG---PDVLRFAPSLVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred HHHHHCCeEEecCC---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999998864221 378999999999999999999999988764
No 215
>PLN00175 aminotransferase family protein; Provisional
Probab=99.68 E-value=1.3e-14 Score=170.92 Aligned_cols=331 Identities=17% Similarity=0.167 Sum_probs=204.4
Q ss_pred ccccccccccCcchhhhhcc----ccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC--ee-eeccCchHH-HH
Q 001579 590 SMIPLGSCTMKLNATTEMMP----VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAA-GE 661 (1050)
Q Consensus 590 ~~i~lGs~t~~~~~~~~~~~----~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d--~~-~l~~~sGa~-ge 661 (1050)
++|.|+.|.+.++......- ..... .+.|.+ .+|..++.+.+.+++.+..|.+ .. .+..++|++ |.
T Consensus 55 ~~i~l~~G~P~~~~~~~~~~~~~~~~~~~---~~~Y~~---~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al 128 (413)
T PLN00175 55 GAINLGQGFPNFDGPDFVKEAAIQAIRDG---KNQYAR---GFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAI 128 (413)
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHHhcC---CCCcCC---CCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHH
Confidence 46788877766543321110 00111 123333 3577777777777777776754 22 354555543 43
Q ss_pred HHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcC-
Q 001579 662 YAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYP- 739 (1050)
Q Consensus 662 ~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~P- 739 (1050)
. ++++.+. .++|+|++++..|..+...+++.|.+++.+++++ ++.+|+++|+++++ +++++|++++|
T Consensus 129 ~---~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~---~~~k~i~i~~p~ 197 (413)
T PLN00175 129 A---ATILGLI-----NPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT---SKTRAILINTPH 197 (413)
T ss_pred H---HHHHHhC-----CCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC---cCceEEEecCCC
Confidence 2 2333321 2468899998877666677889999999999975 46899999999996 67899999999
Q ss_pred CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc-cC----CCCcccCcEEEeCCccccccCCCCCCCcceeeee
Q 001579 740 STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT----SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1050)
Q Consensus 740 n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~g-l~----~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v 811 (1050)
|.+|.+- +++++|+++|+++|+++++|.++..-. .+ .. .++..+-.|++.++.|+|++| |.++|++++
T Consensus 198 NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~----G~RiG~~v~ 273 (413)
T PLN00175 198 NPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT----GWKIGWAIA 273 (413)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc----chheeeeEe
Confidence 5789874 368999999999999999999863211 11 00 112123346778889998654 788999999
Q ss_pred cccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-C
Q 001579 812 KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-Y 890 (1050)
Q Consensus 812 ~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~ 890 (1050)
++++...+-.. +.....+.+...|.. +..++. .++.-+++..+....+++++.+.|++. +
T Consensus 274 ~~~l~~~l~~~--------------~~~~~~~~s~~~Q~a----~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~ 334 (413)
T PLN00175 274 PPHLTWGVRQA--------------HSFLTFATATPMQWA----AVAALR-APESYYEELKRDYSAKKDILVEGLKEVGF 334 (413)
T ss_pred CHHHHHHHHHH--------------HhhccCCCCHHHHHH----HHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 87765543100 000111211112221 222222 233345666667777888999999875 3
Q ss_pred CeeecCCCCccceeEEEecccccccCCC-CHHHHHHHHH-HCCccc-CCCCC-C----CCCEEEEEcCCCCCHHHHHHHH
Q 001579 891 PILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLM-DYGFHG-PTMSW-P----VPGTLMIEPTESESKEELDRYC 962 (1050)
Q Consensus 891 ~v~~~g~~g~~~~e~i~~~~~~~~~~g~-~~~~vakrL~-d~Gi~~-~~~~~-p----v~~~lrI~~te~~t~eeid~fv 962 (1050)
.+ + .+.|.++ +.+++.+ .+. +..++++.|. ++|+.+ |...| + ..+.+||++.. ++++|+..+
T Consensus 335 ~~-~-~p~g~~f--~~~~~~~----~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~--~~e~l~~~~ 404 (413)
T PLN00175 335 KV-Y-PSSGTYF--VMVDHTP----FGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK--DEETLRAAV 404 (413)
T ss_pred ee-c-CCCeeEE--EEEeccc----cCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC--CHHHHHHHH
Confidence 32 1 2223222 3455432 123 4678999886 679875 33223 1 24689999973 688888888
Q ss_pred HHHHHHHH
Q 001579 963 DALISIRE 970 (1050)
Q Consensus 963 ~aL~~i~~ 970 (1050)
+.|.++++
T Consensus 405 ~rL~~~~~ 412 (413)
T PLN00175 405 ERMKTKLK 412 (413)
T ss_pred HHHHHHHh
Confidence 88877653
No 216
>PRK07481 hypothetical protein; Provisional
Probab=99.68 E-value=1.8e-14 Score=171.05 Aligned_cols=339 Identities=17% Similarity=0.180 Sum_probs=209.0
Q ss_pred ccccccccCcchhhhhcccccccccc-CCCCCchhhcccHHHHHHHHHHHHHHhhC---CCeeeeccCchHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFAN-IHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMV 667 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~-~~P~~p~e~~~G~~~~i~el~~~lael~G---~d~~~l~~~sGa~ge~a~Lla 667 (1050)
..||+|.+++..++..+.. ...+.. +.-+ ..+...++.+.|+++++ ++. .++.+||+++++++++.
T Consensus 54 ~~lGh~~p~v~~Ai~~ql~-~~~~~~~~~~~--------~~~~~~~lae~L~~~~~~~~~~~-v~f~~sGsEAve~Alkl 123 (449)
T PRK07481 54 VNVGHNREEVKEAIVRQLD-ELEYYSTFDGT--------THPRAIELSYELIDMFAPEGMRR-VFFSSGGSDSVETALKL 123 (449)
T ss_pred hcCCCCCHHHHHHHHHHHH-hccceeccccc--------CCHHHHHHHHHHHHhcCCCCCCE-EEEcCchHHHHHHHHHH
Confidence 4689998888877766532 211111 1001 11234578888999884 443 36788999999999999
Q ss_pred HHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCC-----CCCCHHH--------HH
Q 001579 668 IRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----GNINIEE--------LR 721 (1050)
Q Consensus 668 ir~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~-----g~iD~e~--------L~ 721 (1050)
+|.|...+|.++|++|| ...++||....+....|- .+..++.... +.-|+++ |+
T Consensus 124 Ar~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le 203 (449)
T PRK07481 124 ARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLE 203 (449)
T ss_pred HHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHH
Confidence 99987666755566665 577899976654332111 1233332110 1124444 34
Q ss_pred HHHH-cCCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEE
Q 001579 722 KAAE-ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCH 788 (1050)
Q Consensus 722 ~~i~-~~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~ 788 (1050)
+.|. ++.+++++|+++.. ...|++.+ .++++.++|+++|+++|+|.+ +.|+.+.|.+ -+|+++
T Consensus 204 ~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~ 279 (449)
T PRK07481 204 REIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEV----VTGFGRTGSWFGSRGWGVKPDIMC 279 (449)
T ss_pred HHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeeh----hhCcCcCchhhHhhhcCCCCCEEE
Confidence 4443 34578999999864 34566542 499999999999999999986 5677777642 379988
Q ss_pred eCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhH
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1050)
+ .|.++ +|.-.+|.+++++++...+..... . .... ...+++.|+++.++++.+.|..+.++++
T Consensus 280 ~--gKgl~----gG~~Pi~av~~~~~i~~~~~~~~~---~-------~~~~-~h~~T~~gnpl~~aaa~a~L~~l~~~~l 342 (449)
T PRK07481 280 L--AKGIT----SGYVPLGATMVNARIADAFEANAD---F-------GGAI-MHGYTYSGHPVACAAALATLDIVVREDL 342 (449)
T ss_pred E--eeccc----CCCcCceEEEEcHHHHHHHhccCc---c-------cccc-ccCCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence 7 58774 332237778888776654421100 0 0000 0112245677888888999998877665
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccc---ccccCC---CCHHHHHHHHHHCCcccCCC
Q 001579 869 TEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG---LKNTAG---IEPEDVAKRLMDYGFHGPTM 937 (1050)
Q Consensus 869 ~~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~---~~~~~g---~~~~~vakrL~d~Gi~~~~~ 937 (1050)
.+ +..+..++|.++|+++ ++++ ..|. |.. +-+++.. .+.... .....+.++|.++|+.+...
T Consensus 343 ~~---~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Glm---~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~ 415 (449)
T PRK07481 343 PA---NAAKRGAYLLEGLQPLKERFELVGDVRGK-GLM---LALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS 415 (449)
T ss_pred HH---HHHHHHHHHHHHHHHHhhcCCCeEEEeec-ceE---EEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec
Confidence 44 3445678888888764 3322 2221 322 1223211 000000 01346778888999987532
Q ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 938 SWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 938 ~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
.+.++++|...+|++|||.++++|.+++.++
T Consensus 416 ----g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 416 ----GTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3568999999999999999999999988764
No 217
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.68 E-value=6.4e-15 Score=169.12 Aligned_cols=279 Identities=17% Similarity=0.170 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---
Q 001579 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (1050)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--- 288 (1050)
...++++.+++++|.+ ++.++.+||.+.+.++.+.+. +++++|+++...|+++...++. .|++++.++.
T Consensus 19 ~~~~~~~~la~~~~~~--~~~~~~sgt~al~~~l~~l~~--~~gd~vl~~~~~~~~~~~~~~~----~g~~~~~~~~~~~ 90 (352)
T cd00616 19 KVREFEKAFAEYLGVK--YAVAVSSGTAALHLALRALGI--GPGDEVIVPSFTFVATANAILL----LGATPVFVDIDPD 90 (352)
T ss_pred HHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCC--CCCCEEEeCCcchHHHHHHHHH----cCCeEEEEecCCC
Confidence 3557889999999975 477888999888777766533 3789999999999999888753 4777777643
Q ss_pred ------hhhhc-cCCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCC---CCcccceEEEecC--
Q 001579 289 ------KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---PGELGADIVVGSA-- 356 (1050)
Q Consensus 289 ------~~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~---pg~~GaDivvgs~-- 356 (1050)
+++++ +++++++|++++ ++|.+.|+++|.++|+++|+++++++ .+++|.... .+.+ .|+.+.|.
T Consensus 91 ~~~~d~~~l~~~i~~~~~~v~~~~--~~G~~~~~~~i~~l~~~~~i~li~D~-a~~~g~~~~~~~~~~~-~d~~~~S~~~ 166 (352)
T cd00616 91 TYNIDPELIEAAITPRTKAIIPVH--LYGNPADMDAIMAIAKRHGLPVIEDA-AQALGATYKGRKVGTF-GDAGAFSFHP 166 (352)
T ss_pred cCCcCHHHHHHhcCcCCeEEEEEC--CCCCcCCHHHHHHHHHHcCCeEEEEC-CCCCCCeECCEEcccC-cceeEEcCCC
Confidence 34555 667899999876 57999999999999999999999943 445543221 1222 58888773
Q ss_pred -ccccccCCCCCcceEEEEEe-hhhhhcCCCcE-EeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH
Q 001579 357 -QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRI-VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1050)
Q Consensus 357 -k~~g~P~~~GGP~~G~la~~-~~~~r~lpgri-vG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~ 433 (1050)
|+|+ +|.+|++.++ +++.+++.... -|...+ . . +.+..+.+. +..+..+.+++
T Consensus 167 ~K~~~------~~~gg~~~~~~~~~~~~~~~~~~~~~~~~----~-~-----------~~~~~~~~~--~~~~~~~~aa~ 222 (352)
T cd00616 167 TKNLT------TGEGGAVVTNDEELAERARLLRNHGRDRD----R-F-----------KYEHEILGY--NYRLSEIQAAI 222 (352)
T ss_pred CCCCc------ccCceEEEECCHHHHHHHHHHHHcCCCCC----C-C-----------ccccceeee--ccCcCHHHHHH
Confidence 5552 2234666665 45555442110 010000 0 0 111111111 01111222222
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-----CccEEEEecC---C--HHHHHHHHHHcCceeeeec
Q 001579 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-----FFDTVKVKCA---D--AHAIASAAYKIEMNLRVVD 503 (1050)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~-----~~~~v~i~~~---~--~~~i~~~L~~~GI~~~~~~ 503 (1050)
.....++++++.++..++++++++.|+++.+++++..+ ....+.|.++ + ..++.+.|.++||.++...
T Consensus 223 --~~~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~ 300 (352)
T cd00616 223 --GLAQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHY 300 (352)
T ss_pred --HHHHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeec
Confidence 12233567888899999999999999997448877431 1123555544 3 7899999999999654210
Q ss_pred ---------------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 504 ---------------------------SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 504 ---------------------------~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
.+.||++++.++|++||++++++|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 301 PPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 1579999999999999999999874
No 218
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.68 E-value=2.7e-15 Score=173.19 Aligned_cols=282 Identities=15% Similarity=0.193 Sum_probs=178.4
Q ss_pred HHHHHHHHHhhCCCeeeecc-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~-~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g 713 (1050)
.++++.+++++|.+...+.. ++|+++- ...+++.+. .++++|+++...+......++..|++++.++.+.++
T Consensus 72 ~~lr~~ia~~~~~~~~~i~~~~~Ga~~~--i~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 144 (361)
T PRK00950 72 PELREALSKYTGVPVENIIVGGDGMDEV--IDTLMRTFI-----DPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDF 144 (361)
T ss_pred HHHHHHHHHHhCCCHHHEEEeCCCHHHH--HHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCC
Confidence 57888999999987654444 5665532 222333321 245789988865544444577899999999987777
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCC--CcccCcEEEeC
Q 001579 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP--GYIGADVCHLN 790 (1050)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p--g~~GaDv~~~~ 790 (1050)
.+|+++|+++++ +++++|++++| |.+|.+. +.+++.++|+++|+++++|+++..-...-..+ ....--++..+
T Consensus 145 ~~~~~~l~~~~~---~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S 220 (361)
T PRK00950 145 SLDVDSVLNAIT---EKTKVIFLCTPNNPTGNLI-PEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRT 220 (361)
T ss_pred CcCHHHHHHHhc---cCCCEEEEeCCCCCCCCCc-CHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEe
Confidence 899999999986 67888999999 4799987 79999999999999999999863211100000 01111255667
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
++|+|++| |.++|++.+++++...+-.. .....++ ..++ .++..++. ..+-+.+
T Consensus 221 ~SK~~g~~----GlRiG~~~~~~~~~~~~~~~--------------~~~~~~~--~~~~----~~a~~~l~--~~~~~~~ 274 (361)
T PRK00950 221 FSKVFGLA----GLRIGYGFVPEWLIDYYMRA--------------KTPFSLT--RLSQ----AAAIAALS--DKEYIEK 274 (361)
T ss_pred ehHhhcCc----hhhcchhcCCHHHHHHHHHh--------------cCCCCCC--HHHH----HHHHHHhc--CHHHHHH
Confidence 88988543 56799999887665433100 0001111 1111 12222222 1222444
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCCC--CCEEEE
Q 001579 871 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPV--PGTLMI 947 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~-~~~pv--~~~lrI 947 (1050)
..+....+.+++.+.|+ +.+ ++ +.+. -+.+++. +.+..+++++|.++||.+.. ..|+. .+.+||
T Consensus 275 ~~~~~~~~r~~l~~~l~--~~~-~~-~~~~---~i~~~~~------~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRi 341 (361)
T PRK00950 275 SIEHGIKSREYLYNELP--FKV-YP-SEAN---FVLVDVT------PMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRV 341 (361)
T ss_pred HHHHHHHHHHHHHhhcC--eeE-CC-Ccce---EEEEECC------CCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEE
Confidence 44444555666666665 232 21 2222 2445553 35788999999999998743 33532 468999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHH
Q 001579 948 EPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 948 ~~te~~t~eeid~fv~aL~~i~ 969 (1050)
++. +.+|+++++++|++++
T Consensus 342 s~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 342 SIG---TFEENERFLEILKEIV 360 (361)
T ss_pred ECC---CHHHHHHHHHHHHHHh
Confidence 986 6789999999998875
No 219
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.67 E-value=1.6e-14 Score=167.54 Aligned_cols=214 Identities=22% Similarity=0.210 Sum_probs=158.2
Q ss_pred HHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch--
Q 001579 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1050)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 289 (1050)
...++++.+|+++|.+. +.++.+|++|+.++++++ . ++||+|+++...|..+...++..++..|++++.++.+
T Consensus 41 ~~~~le~~la~l~g~~~--a~~~~sG~~Ai~~~l~~l-~--~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~ 115 (369)
T cd00614 41 TVDALEKKLAALEGGEA--ALAFSSGMAAISTVLLAL-L--KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDP 115 (369)
T ss_pred hHHHHHHHHHHHHCCCC--EEEEcCHHHHHHHHHHHH-c--CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCH
Confidence 34567789999999865 778899998888777665 2 2789999999999998887776666789999998764
Q ss_pred -hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCC
Q 001579 290 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1050)
Q Consensus 290 -~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~ 365 (1050)
++++ +++++++|++.+| |.+|.+.|+++|+++||++|++++| ++.++.+....|.++|+|++++|. |.|++|
T Consensus 116 ~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~liv-D~t~~~~~~~~~~~~g~Divv~S~tK~l~g~--- 191 (369)
T cd00614 116 EALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVV-DNTFATPYLQRPLELGADIVVHSATKYIGGH--- 191 (369)
T ss_pred HHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEE-ECCCcchhcCChhhhCCcEEEeccceeccCC---
Confidence 4555 6778999999988 7899999999999999999999999 456676666667789999999998 777532
Q ss_pred CCcceEEEEEeh-hhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHH
Q 001579 366 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1050)
Q Consensus 366 GGP~~G~la~~~-~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~ 444 (1050)
|..-+|++.+++ ++.+++.. .++.-|+ .+ +++ .+ |+...+-+.+.
T Consensus 192 ~~~~gG~v~~~~~~l~~~l~~-------------------------~~~~~g~-~~---~p~---~a--~~~l~~l~tl~ 237 (369)
T cd00614 192 SDVIAGVVVGSGEALIQRLRF-------------------------LRLALGT-IL---SPF---DA--WLLLRGLKTLP 237 (369)
T ss_pred CCceEEEEEeCcHHHHHHHHH-------------------------HHHhhCC-CC---CHH---HH--HHHHcCCCCHH
Confidence 223468888876 65544310 0011111 11 122 11 22344556677
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEE
Q 001579 445 TIAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
...++..+++.++++.|++.++++
T Consensus 238 ~r~~~~~~na~~la~~L~~~~~v~ 261 (369)
T cd00614 238 LRMERHSENALKVAEFLEKHPKVE 261 (369)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcc
Confidence 788889999999999999986454
No 220
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.67 E-value=1.1e-14 Score=167.47 Aligned_cols=274 Identities=18% Similarity=0.188 Sum_probs=179.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEc
Q 001579 207 QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1050)
Q Consensus 207 qG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~ 286 (1050)
.|..+...++++.+++++|.+. ..++.+|+.++.+++.+. . ++||+|++++..|+++...++. .|++++.+
T Consensus 57 ~g~~~~~~~l~~~la~~~~~~~--~i~~~~G~~~~~~~l~~~-~--~~gd~v~~~~~~~~~~~~~~~~----~g~~~~~~ 127 (360)
T TIGR00858 57 SGNSPLHEELEEELAEWKGTEA--ALLFSSGYLANVGVISAL-V--GKGDLILSDALNHASLIDGCRL----SGARVRRY 127 (360)
T ss_pred cCCcHHHHHHHHHHHHHhCCCC--EEEECchHHHHHHHHHHh-C--CCCCEEEEEccccHHHHHHHHh----cCCceEEe
Confidence 3444556678899999999653 445556665555544333 2 3789999999999999887653 46666655
Q ss_pred C---chhhhc-cC----CCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCC----------Ccc
Q 001579 287 D---LKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPP----------GEL 347 (1050)
Q Consensus 287 ~---~~~l~~-l~----~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~p----------g~~ 347 (1050)
+ ++++++ +. +++++|++..+ |.+|.+.|+++|.++|+++|++++++ +..+.+.+... ...
T Consensus 128 ~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~ 206 (360)
T TIGR00858 128 RHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVD-DAHGTGVLGEDGRGTLEHFGLKPE 206 (360)
T ss_pred cCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEE-CcccccCcCCCCCchHHhcCCCcc
Confidence 3 456655 43 34677777766 67899999999999999999999994 34444322110 123
Q ss_pred cceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHH
Q 001579 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQAL 426 (1050)
Q Consensus 348 GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l 426 (1050)
+.||+++|. |.|+. ++ |++..++++.+.+... ...+. . .+ -+++...
T Consensus 207 ~~~i~i~s~sK~~~~------~g-G~~~~~~~~~~~~~~~----------~~~~~-----------~--~~--~~~~~~~ 254 (360)
T TIGR00858 207 PVDIQVGTLSKALGS------YG-AYVAGSQALIDYLINR----------ARTLI-----------F--ST--ALPPAVA 254 (360)
T ss_pred CCcEEEEechhhhhc------cC-cEEEcCHHHHHHHHHh----------Cccce-----------e--cC--CCCHHHH
Confidence 779999997 87753 22 6888877766554100 00000 0 00 0112223
Q ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeee-
Q 001579 427 LANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV- 502 (1050)
Q Consensus 427 ~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~i~~~L~~~GI~~~~~- 502 (1050)
.+..+++ .++. .++++.++..++.+++.+.|+++| +++..+ ....+.+..+. ..++.++|.++||.+...
T Consensus 255 ~a~~~al--~~~~--~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~ 328 (360)
T TIGR00858 255 AAALAAL--ELIQ--EEPWRREKLLALIARLRAGLEALG-FTLMPS-CTPIVPVIIGDNASALALAEELQQQGIFVGAIR 328 (360)
T ss_pred HHHHHHH--HHHh--hCHHHHHHHHHHHHHHHHHHHHcC-CccCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeC
Confidence 3333333 2221 235678889999999999999987 776532 12234455543 678999999999988532
Q ss_pred ------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 503 ------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 503 ------~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
..+.+|++++.++|.+|+++++++|+
T Consensus 329 ~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 329 PPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 13589999999999999999999874
No 221
>PRK07682 hypothetical protein; Validated
Probab=99.67 E-value=7.5e-15 Score=170.78 Aligned_cols=300 Identities=13% Similarity=0.149 Sum_probs=190.8
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ee-eeccCc-hHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNA-GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~-~l~~~s-Ga~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
+|..++.+.+.+++.+.+|.+ .. .+..++ ++++... +++.+. .++++|++++..|+.....+++.|.+
T Consensus 57 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~---~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 128 (378)
T PRK07682 57 AGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDV---AMRAII-----NPGDEVLIVEPSFVSYAPLVTLAGGV 128 (378)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH---HHHHhC-----CCCCEEEEeCCCchhhHHHHHHcCCE
Confidence 577777778888887776753 22 233444 4444433 333321 24578999988777666678889999
Q ss_pred EEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc-c
Q 001579 704 IVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-L 776 (1050)
Q Consensus 704 vv~V~~d~--~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~g-l 776 (1050)
++.++.+. ++.+|+++|++++. +++++|++++| |.+|.+- +++++|.++|+++|+++++|.++..-. .+ .
T Consensus 129 ~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 205 (378)
T PRK07682 129 PVPVATTLENEFKVQPAQIEAAIT---AKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAY 205 (378)
T ss_pred EEEeecCCccCCCCCHHHHHhhcC---cccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCC
Confidence 99998753 46799999999986 68899999999 5788774 359999999999999999999853111 11 0
Q ss_pred CC----CCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 777 TS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 777 ~~----pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
.. ++...-.+++.+++|+|++| |.++|++++++++.+.+-.. ......+.+...+.
T Consensus 206 ~~~~~~~~~~~~~i~~~S~SK~~~~~----GlR~G~~~~~~~~i~~l~~~--------------~~~~~~~~~~~~q~-- 265 (378)
T PRK07682 206 TSFASIKGMRERTILISGFSKGFAMT----GWRLGFIAAPVYFSEAMLKI--------------HQYSMMCAPTMAQF-- 265 (378)
T ss_pred CChhhcccccCCEEEEecCcccccCh----hhhhhhhhcCHHHHHHHHHH--------------HHhhccCCCHHHHH--
Confidence 00 11112346778889998644 67799999987766544210 00001111111121
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HC
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~ 930 (1050)
++..++. -|.+.+++..+...++++++.+.|+++ +++ ..+.+.++ +++++++ .+.+..++++.|. ++
T Consensus 266 --a~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~--~~p~g~~~--~~~~~~~----~~~~~~~~~~~ll~~~ 334 (378)
T PRK07682 266 --AALEALR-AGNDDVIRMRDSYRKRRNFFVTSFNEIGLTC--HVPGGAFY--AFPSISS----TGLSSEEFAEQLLLEE 334 (378)
T ss_pred --HHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHHCCCcc--CCCCeeEE--EEEeccC----CCCCHHHHHHHHHHhC
Confidence 1222222 233345566666677888999999875 332 22223221 2334431 2356788998876 78
Q ss_pred CcccC-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 931 GFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 931 Gi~~~-~~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
|+.+. ...|. ..+++||++.. +.+++++.++.|++++++
T Consensus 335 gv~v~pg~~f~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 335 KVAVVPGSVFGESGEGFIRCSYAT--SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred CEEEcCchhhCcCCCCeEEEEeCC--CHHHHHHHHHHHHHHHhh
Confidence 99864 32332 25789999874 588999999999887754
No 222
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.67 E-value=3.3e-14 Score=168.84 Aligned_cols=318 Identities=19% Similarity=0.193 Sum_probs=199.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC--
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~-- 711 (1050)
+.++++.+++++|.+.+ +.+++|++|+..+++++. .++| |+++...+.++.....+.|.+++.+++++
T Consensus 80 ~~~Lreaia~~~~~~~v-v~t~ggt~A~~~~~~all--------~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~ 149 (460)
T PRK13238 80 YYRLEDAVKDIFGYPYT-IPTHQGRAAEQILFPVLI--------KKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEAL 149 (460)
T ss_pred HHHHHHHHHHHhCCCcE-EECCCHHHHHHHHHHHhC--------CCCC-EEccCCcccchHHHHHHcCCEEEEEeccccc
Confidence 56788899999998865 556677777754443321 2457 78887755555666788999999999863
Q ss_pred --------CCCCCHHHHHHHHHcCC-CCEEEEEEEcCC-Ccc-ccc--cCHHHHHHHHHHcCCEEEEeccccc--ccc--
Q 001579 712 --------KGNINIEELRKAAEANR-DNLSTLMVTYPS-THG-VYE--EGIDEICKIIHDNGGQVYMDGANMN--AQV-- 774 (1050)
Q Consensus 712 --------~g~iD~e~L~~~i~~~~-~~taaV~vt~Pn-~~G-v~~--~di~eI~~la~~~G~~v~vD~A~~~--al~-- 774 (1050)
.|++|+++|+++|++++ ++|++|++++|+ .+| .+- +++++|+++|++||++|++|+|+.. +..
T Consensus 150 ~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~ 229 (460)
T PRK13238 150 DTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIK 229 (460)
T ss_pred cccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhh
Confidence 26699999999998543 479999999995 555 332 3689999999999999999998742 211
Q ss_pred ----cc--CCCCc------ccCcEEEeCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCCCCC
Q 001579 775 ----GL--TSPGY------IGADVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1050)
Q Consensus 775 ----gl--~~pg~------~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~ 841 (1050)
+. .+.++ -.+|++++++||.+. ||..|+++++ +++...+....+.. ++ ...
T Consensus 230 ~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~------~~~GG~i~~~d~~l~~~~~~~~~~~------~g----~~t 293 (460)
T PRK13238 230 QREPGYKDKSIKEIAREMFSYADGLTMSAKKDAM------VNIGGLLCFRDEDLFTECRTLCILY------EG----FPT 293 (460)
T ss_pred hccccccCCCHHHHhhhhcccCcEEEEecccCCC------CcceeEEEcChHHHHHHhhhccccc------CC----ccc
Confidence 11 11111 137999999999764 3434788888 46665543211100 00 001
Q ss_pred CCcchhhhHHHHHHHHH-HH-HHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccc---c
Q 001579 842 IAAAPWGSALILPISYT-YI-AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---T 915 (1050)
Q Consensus 842 i~sa~~g~~~~~~~a~a-~l-~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~---~ 915 (1050)
.+ |.+.....|.+ .+ ..+..+.+. ....++++|.+.|++. +++.. +.|. |-+.+|+..+.. .
T Consensus 294 ~~----g~~~~~~~Ala~~l~e~~~~~~~~----~~~~~~~~l~~~L~~~G~~~~~--p~Gg--~~v~~d~~~~~~~~~~ 361 (460)
T PRK13238 294 YG----GLAGRDMEALAVGLYEGMDEDYLA----YRIGQVEYLGEGLEEAGVPIQT--PAGG--HAVFVDAGKFLPHIPA 361 (460)
T ss_pred cc----CcHHHHHHHHHhhHHHhhChHHHH----HHHHHHHHHHHHHHHCCCCeEc--cCCc--eEEEEEchhcCCCCCC
Confidence 11 11111111211 12 222332222 2344679999999875 66643 3332 446788765421 1
Q ss_pred CCCCHHHHHHHHH-HCCccc-CCC--CCC-----------CCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 001579 916 AGIEPEDVAKRLM-DYGFHG-PTM--SWP-----------VPGTLMIEPTE-SESKEELDRYCDALISIREEIAQIENGK 979 (1050)
Q Consensus 916 ~g~~~~~vakrL~-d~Gi~~-~~~--~~p-----------v~~~lrI~~te-~~t~eeid~fv~aL~~i~~ei~~~~~~~ 979 (1050)
.+....+++.+|. +.||.+ +.. .++ ..+.+|+++.- ..|.+++|..+++|+.+.+.-..|.-=+
T Consensus 362 ~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 441 (460)
T PRK13238 362 EQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKENRESIKGLR 441 (460)
T ss_pred CCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHhHhhcCCeE
Confidence 1224577888876 778875 221 111 13679999874 3488999999999999998777765444
Q ss_pred CCCCCCcccc
Q 001579 980 ADIHNNVLKG 989 (1050)
Q Consensus 980 ~~~~~~~~~~ 989 (1050)
+..+|.+|++
T Consensus 442 ~~~~~~~~r~ 451 (460)
T PRK13238 442 FTYEPPVLRH 451 (460)
T ss_pred EeecCcccee
Confidence 5556665553
No 223
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.67 E-value=1.7e-14 Score=169.06 Aligned_cols=296 Identities=12% Similarity=0.115 Sum_probs=187.9
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Ce-eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGF--DS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~--d~-~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++.+..|. +. ..+..++|++.. ..++++.+. .++++|+++...+..+...+++.|+++
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a--l~~~~~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G~~~ 141 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDG--LVHLPMVYA-----NPGDIILVPDPGYTAYETGIQMAGATS 141 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHH--HHHHHHHhC-----CCCCEEEECCCCccchHHHHHhcCCEE
Confidence 57767676777777666564 33 345556665532 223333331 246889999988877777788999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cccCC
Q 001579 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTS 778 (1050)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~gl~~ 778 (1050)
+.++++++ ..+|++++++++. +++++|++++| |.+|.+. +.+++|+++|+++|+++++|.++..-. .+-..
T Consensus 142 ~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~ 218 (399)
T PRK07681 142 YYMPLKKENDFLPDLELIPEEIA---DKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKP 218 (399)
T ss_pred EEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCC
Confidence 99999765 3679999999886 68899999998 5789875 248899999999999999999864211 11100
Q ss_pred C------CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 779 P------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 779 p------g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
+ +...-.|++.+++|+|+.| |.++|++++++++...+-.. +.....+.+...+.
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~~i~~~~l~~~~~~~--------------~~~~~~~~s~~~q~-- 278 (399)
T PRK07681 219 ISFLSVPGAKEVGVEINSLSKSYSLA----GSRIGYMIGNEEIVRALTQF--------------KSNTDYGVFLPIQK-- 278 (399)
T ss_pred CChhhCCCCcccEEEEeecccccCCc----cceeEEEecCHHHHHHHHHH--------------HhhcccCCCHHHHH--
Confidence 1 1112346677889998644 67899999887665543100 00001111111121
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHH-C
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD-Y 930 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d-~ 930 (1050)
++..++. -+.+-+++..+....+.+++.+.|++. +++. .+.+..+ +.++++ .+.+..+++++|.+ +
T Consensus 279 --~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~p~~g~f--~~~~l~-----~~~~~~~~~~~l~~~~ 346 (399)
T PRK07681 279 --AACAALR-NGAAFCEKNRGIYQERRDTLVDGFRTFGWNVD--KPAGSMF--VWAEIP-----KGWTSLSFAYALMDRA 346 (399)
T ss_pred --HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCeeeE--EEEECC-----CCCCHHHHHHHHHHhC
Confidence 1122221 223334555555566778888988875 3332 1222221 455654 24567889999887 8
Q ss_pred CcccCC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001579 931 GFHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALIS 967 (1050)
Q Consensus 931 Gi~~~~-~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~ 967 (1050)
|+.+.. ..|. ..+.+||++. .++++++++++.|++
T Consensus 347 gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 347 NVVVTPGHAFGPHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred CEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 998643 2343 2478999997 468999999998887
No 224
>PRK07480 putative aminotransferase; Validated
Probab=99.67 E-value=2.8e-14 Score=169.46 Aligned_cols=342 Identities=18% Similarity=0.206 Sum_probs=208.8
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCC--CeeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~--d~~~l~~~sGa~ge~a~Llair 669 (1050)
..+|+|...+..++..+.. ...+.. .+ .....+...++.+.|+++++. +.+ ++.+||++++++++.++|
T Consensus 62 ~~lGh~~p~v~~Ai~~q~~-~~~~~~--~~-----~~~~~~~~~~lae~L~~~~p~~~~~v-~f~~SGseA~e~AlklAr 132 (456)
T PRK07480 62 VNVGYGRKELADAAARQMR-ELPYYN--TF-----FKTTHPPAIELAAKLAEVAPPGFNHV-FFTNSGSEANDTVLRMVR 132 (456)
T ss_pred hcCCCCCHHHHHHHHHHHH-hcCCcc--cc-----cccCCHHHHHHHHHHHHhCCCCcCEE-EEeCCcHHHHHHHHHHHH
Confidence 4678888877777666532 211111 00 001123455788889998853 443 667899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCC------CCC------CHHHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK------GNI------NIEELRKAA 724 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~------g~i------D~e~L~~~i 724 (1050)
.|...+|.++|++|| ...++||..-......|. .+..++.... ... .+++|++.+
T Consensus 133 ~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~ 212 (456)
T PRK07480 133 HYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKI 212 (456)
T ss_pred HHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHH
Confidence 987666755566666 467899976544322221 1222332110 000 136676655
Q ss_pred Hc-CCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc------c--CcEEEeCC
Q 001579 725 EA-NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNL 791 (1050)
Q Consensus 725 ~~-~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~------G--aDv~~~~~ 791 (1050)
.+ +.+++++|+++.. ...|++.+ .+++|.++|++||+++|+|.+ +.||.+.|.+ | +|++++
T Consensus 213 ~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~a~~~~gv~PDiv~~-- 286 (456)
T PRK07480 213 LELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEV----ICGFGRTGEWFGSQHFGIKPDLMTI-- 286 (456)
T ss_pred HhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech----hhCCCcCcchhhhhhcCCCCCeeee--
Confidence 43 3468999988754 34577652 399999999999999999986 5677777643 2 688877
Q ss_pred ccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHH
Q 001579 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 871 (1050)
Q Consensus 792 hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~ 871 (1050)
.|.++ +|--.+|.+++++++...+.... +. ....+++.|+++.++++.+.|..+-++++.+.
T Consensus 287 gK~l~----gG~~Pi~av~~~~~i~~~~~~~~-~~-------------~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~ 348 (456)
T PRK07480 287 AKGLT----SGYIPMGAVGVGDRVAEVLIEEG-GE-------------FNHGFTYSGHPVAAAVALANLRILRDEGIVER 348 (456)
T ss_pred ehhhc----cCCccceEEEEcHHHHHHHhcCC-CC-------------cccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence 58774 33223667777877665441100 00 00111244678888889999998877766543
Q ss_pred HHHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEecccccccC--C--CCHHHHHHHHHHCCcccCCCCCCCCC
Q 001579 872 SKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTA--G--IEPEDVAKRLMDYGFHGPTMSWPVPG 943 (1050)
Q Consensus 872 a~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~~~--g--~~~~~vakrL~d~Gi~~~~~~~pv~~ 943 (1050)
++ ....++|.++|+++ ++++ ..|. |.. ..+-+.-..-.+.. . .....+.++|.++|+.+.. ..+
T Consensus 349 ~~--~~~g~~l~~~l~~l~~~~~i~~vrG~-Glm-~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~----~~~ 420 (456)
T PRK07480 349 VR--DDTGPYLQKRLRELADHPLVGEVRGV-GLV-GAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRA----VGD 420 (456)
T ss_pred HH--HHHHHHHHHHHHHhhcCCCeeeEEee-cce-EEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEee----cCC
Confidence 31 24567777777663 3321 2232 322 11222111000000 0 0124677888999998753 247
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 944 TLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 944 ~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
.+++.|+...|++|||+++++|.+++.++.+
T Consensus 421 ~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 421 RMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999988744
No 225
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.67 E-value=9.2e-15 Score=169.58 Aligned_cols=211 Identities=15% Similarity=0.153 Sum_probs=154.1
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 290 (1050)
..+++.+|++.|.+. +.++.+|++|+.++++++ .. +||+||+++..|+.+...+....+..|++++.++. ++
T Consensus 53 ~~lE~~lA~l~g~~~--~~~~~sG~~Ai~~al~al-l~--~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~ 127 (377)
T TIGR01324 53 FALQDAMCELEGGAG--CYLYPSGLAAVTNSILAF-VK--AGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGED 127 (377)
T ss_pred HHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-cC--CCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 346789999999764 888999999888887765 33 89999999999988776554445567999988876 45
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|+ +.++.+.+..|.++|+||+++|. |.++++ |+
T Consensus 128 l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD-~t~a~g~~~~pl~~gaDivv~S~tK~l~G~---~d 203 (377)
T TIGR01324 128 IATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMID-NTWAAGLLFKPLEHGVDISIQAGTKYLVGH---SD 203 (377)
T ss_pred HHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCccccccCccccCceEEEecCceeccCC---CC
Confidence 666 7889999999998 78999999999999999999999994 56777877778899999999998 887654 23
Q ss_pred cceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHH
Q 001579 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1050)
Q Consensus 368 P~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia 447 (1050)
-.+|+++++++..+++- ..++-.|+. . ++ ...|+...|.+-+....
T Consensus 204 ~~gG~v~~~~~~~~~l~-------------------------~~~~~~G~~-l---~p-----~~a~~~~rgl~tl~~R~ 249 (377)
T TIGR01324 204 IMIGTVVANARTWDQLR-------------------------EHSYLMGQM-V---DA-----DDAYTTLRGLRTLGVRL 249 (377)
T ss_pred ceEEEEEeCHHHHHHHH-------------------------HHHHHhCCC-C---CH-----HHHHHHHhhhhhHHHHH
Confidence 34688888776544330 000111100 0 11 11223444444555567
Q ss_pred HHHHHHHHHHHHHHhcCCCE
Q 001579 448 QRVHGLAGTFALGLKKLGTV 467 (1050)
Q Consensus 448 ~~~~~~a~~l~~~L~~~G~~ 467 (1050)
++..++|..+++.|++...+
T Consensus 250 ~~~~~~a~~la~~L~~~p~v 269 (377)
T TIGR01324 250 KQHQESSLAIAKWLSEQPEV 269 (377)
T ss_pred HHHHHHHHHHHHHHHhCCCc
Confidence 77888888999999987434
No 226
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=3.7e-14 Score=167.95 Aligned_cols=323 Identities=18% Similarity=0.189 Sum_probs=197.6
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC---CCeeeeccCchHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVI 668 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G---~d~~~l~~~sGa~ge~a~Llai 668 (1050)
..+|++...+..++..+... ..+.....|. .+...++.+.|+++++ ++. .++.+||++++++++..+
T Consensus 66 ~~lGh~~p~v~~Ai~~ql~~-~~~~~~~~~~--------~~~~~~lAe~L~~~~p~~~~~~-v~f~~SGsEA~e~AlklA 135 (441)
T PRK05769 66 TNVGHAHPKVVKAVKEQAEK-FLHYSLTDFY--------YEPAVELAERLVEIAPGGFEKK-VFFTNSGTESNEAAIKIA 135 (441)
T ss_pred cccCCCCHHHHHHHHHHHHh-ccCccCcccC--------CHHHHHHHHHHHHhCCCCCCCE-EEECCchHHHHHHHHHHH
Confidence 45788877777666655322 1111110111 1234578889999885 343 467899999999999988
Q ss_pred HHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC-------------EEEEEcCCCCCC-------------CCHHHHH
Q 001579 669 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAKGN-------------INIEELR 721 (1050)
Q Consensus 669 r~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~-------------~vv~V~~d~~g~-------------iD~e~L~ 721 (1050)
|.| . +|++|+ ...++||....+....|. .+..++.....+ -+++.++
T Consensus 136 r~~---t---gr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 209 (441)
T PRK05769 136 RYH---T---GRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIE 209 (441)
T ss_pred HHH---h---CCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHH
Confidence 876 2 244555 567899988665443221 234444421100 1234466
Q ss_pred H-HHHc--CCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCc------cc--CcE
Q 001579 722 K-AAEA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADV 786 (1050)
Q Consensus 722 ~-~i~~--~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~------~G--aDv 786 (1050)
+ .+++ +.+++++|+++.. +..|++.+ .+++|.++|+++|+++++|.++ .|+.+.|. +| +|+
T Consensus 210 ~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~----tG~gr~G~~~a~~~~gv~pDi 285 (441)
T PRK05769 210 DYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQ----TGMGRTGKMFAIEHFGVEPDI 285 (441)
T ss_pred HHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hCCCcccceehhhccCCCCCE
Confidence 6 3332 3467888888654 45677651 2999999999999999999874 44555553 23 588
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+++ .|.++ ||-.+|.+++++++..++++. + +. ++.|++..++++.+.+..+..
T Consensus 286 vt~--~K~l~-----~G~p~gav~~~~~i~~~~~~~----------~------~~---T~~g~p~~~aaa~a~L~~l~~- 338 (441)
T PRK05769 286 ITL--AKAIA-----GGLPLGAVIGRAELMFLPPGS----------H------AN---TFGGNPVAAAAALATLEELEE- 338 (441)
T ss_pred EEE--ccccc-----CCcccEEEEEehhhhhcCCCC----------C------CC---CCCcCHHHHHHHHHHHHHHHH-
Confidence 875 47764 345577888888776544311 0 11 123456667777888887754
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEecccc-cccCCCCHHHHHHHHHHCCcccCCCCCC
Q 001579 867 GLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGL-KNTAGIEPEDVAKRLMDYGFHGPTMSWP 940 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~-~~~~g~~~~~vakrL~d~Gi~~~~~~~p 940 (1050)
++ .++...+.++|+++|+++ ++++ ..|. |.. +.+.+..- ++........+.+.|.++|+.+....
T Consensus 339 ~~---~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~-- 409 (441)
T PRK05769 339 GL---LENAQKLGEYLRKELKELKEKYEFIGDVRGL-GLM---IGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG-- 409 (441)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHhCCCeeeeecc-eEE---EEEEeccCCccccHHHHHHHHHHHHhCCcEEecCC--
Confidence 43 344556788999988764 3332 1121 211 12222110 00000113567888889999875322
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 941 VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 941 v~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
.+.||++|+..+|++|||+++++|.+++.+
T Consensus 410 -~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 410 -KSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999998865
No 227
>PRK05968 hypothetical protein; Provisional
Probab=99.67 E-value=5e-15 Score=172.78 Aligned_cols=273 Identities=18% Similarity=0.137 Sum_probs=191.2
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch---
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 289 (1050)
..++++.+|+++|.+. +.++.+||+++.+++++. + ++||+||++...|+.+...+...+...|++++++|.+
T Consensus 65 ~~~le~~lA~l~g~~~--av~~~sG~~Ai~~al~al-~--~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 139 (389)
T PRK05968 65 VRAFEEMLAKLEGAED--ARGFASGMAAISSTVLSF-V--EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEE 139 (389)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-h--CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHH
Confidence 4567899999999975 567788888777666554 2 3899999999999998887766666789999998764
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ + ++|++|++++| |..+.+.|+++|+++||++|++++|+ +.++.+....|.++|+|+++.|. |.|++| |
T Consensus 140 ~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD-~a~a~~~~~~p~~~g~Divv~S~tK~l~g~---~ 214 (389)
T PRK05968 140 AVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMID-NSWASPVFQRPITLGVDLVIHSASKYLGGH---S 214 (389)
T ss_pred HHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCcchhccCchhcCCcEEEeeccccccCC---C
Confidence 4555 5 57899999998 67899999999999999999999994 34555554556788999999998 777644 3
Q ss_pred CcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 367 GP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
++.+|+++.++++.+++... + +..-+ ..+ .+ ..|++ ...+-+.+..+
T Consensus 215 ~~~gG~i~~~~~~~~~l~~~--------------------~----~~~~g-~~~---~~---~~A~~--~l~~L~tl~~r 261 (389)
T PRK05968 215 DTVAGVVAGSKEHIARINAE--------------------A----YPYLG-AKL---SP---FEAWL--LLRGLRTLPLR 261 (389)
T ss_pred CeEEEEEEECHHHHHHHHHH--------------------H----HHhCC-CCC---Ch---HHHHH--HHcccCcHHHH
Confidence 45568888888766544100 0 00001 000 11 12222 34445567777
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEcC-C-----------CCccEEEEecCC---HHHHHHHHHHcCceee-----e-----
Q 001579 447 AQRVHGLAGTFALGLKKLGTVEVQG-L-----------PFFDTVKVKCAD---AHAIASAAYKIEMNLR-----V----- 501 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~l~~-~-----------~~~~~v~i~~~~---~~~i~~~L~~~GI~~~-----~----- 501 (1050)
.++..+++.++++.|++..+++.+. + .+...|+|.+++ +.++.++|...++.++ .
T Consensus 262 ~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~ 341 (389)
T PRK05968 262 MKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPA 341 (389)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeC
Confidence 7888889999999999885465432 1 111257777753 6678888876554211 0
Q ss_pred -----------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 502 -----------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 502 -----------------~~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+.++.||+|++..++++=|+.|-++|.
T Consensus 342 ~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~ 385 (389)
T PRK05968 342 EVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALA 385 (389)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHH
Confidence 114689999999887777788887775
No 228
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=3.5e-14 Score=168.29 Aligned_cols=333 Identities=18% Similarity=0.243 Sum_probs=205.1
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC--eeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d--~~~l~~~sGa~ge~a~Llair 669 (1050)
..+|+|.+++..++..+.... .+....-+. .+...++.+.|+++++.. ...++.+||++++++++..+|
T Consensus 54 ~~lGH~~p~v~~Ai~~ql~~~-~~~~~~~~~--------~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr 124 (445)
T PRK08593 54 QNVGHAPPRVVEAIKAQADKF-IHYTPAYMY--------HEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFAR 124 (445)
T ss_pred hcCCCCCHHHHHHHHHHHHhc-cCccccccC--------CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHH
Confidence 468998888877766653221 111100011 133457889999998533 234667899999999888888
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC-------------EEEEEcCCCC-----CCCC-------HHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAK-----GNIN-------IEELRKA 723 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~-------------~vv~V~~d~~-----g~iD-------~e~L~~~ 723 (1050)
.|. +|.+|| ...++||....+....+. .++.++.... +..+ ++++++.
T Consensus 125 ~~t------gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (445)
T PRK08593 125 AYT------GRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEM 198 (445)
T ss_pred Hhh------CCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHH
Confidence 762 244555 577899987655433221 2344554221 1111 2456665
Q ss_pred HHcC--CCCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEe
Q 001579 724 AEAN--RDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHL 789 (1050)
Q Consensus 724 i~~~--~~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~ 789 (1050)
++++ .+++++|+++.. +..|++. ..+++|.++|++||+++++|+++ .|+.+.|.+ -+|++++
T Consensus 199 ~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~----tg~GrtG~~~a~~~~gv~pDi~t~ 274 (445)
T PRK08593 199 FEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQ----QGLGRTGKWSSISHFNITPDLMSF 274 (445)
T ss_pred HHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh----hCCCcCchHHHHHhcCCCCCEeee
Confidence 6532 367999988865 4457664 13999999999999999999874 455555542 2688765
Q ss_pred CCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHH
Q 001579 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1050)
Q Consensus 790 ~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1050)
.|.++ ||-.+|.+++++++.+.+.... .+. ++.|++..++++.+.+..+-++++.
T Consensus 275 --gK~l~-----~G~p~gav~~~~~i~~~~~~~~-----------------~~~-T~~~~pl~~aaa~a~l~~l~~~~l~ 329 (445)
T PRK08593 275 --GKSLA-----GGMPMSAIVGRKEIMESLEAPA-----------------HLF-TTGANPVSCAAALATIDMIEDESLL 329 (445)
T ss_pred --ccccc-----CCcccEEEEEcHHHHhhhccCC-----------------CCC-CCCCCHHHHHHHHHHHHHHHhccHH
Confidence 58763 3444778888888776653110 001 1234556677778888887665443
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccc---ccccCCCCHHHHHHHHHHCCcccCCCCCCC
Q 001579 870 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG---LKNTAGIEPEDVAKRLMDYGFHGPTMSWPV 941 (1050)
Q Consensus 870 ~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~---~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv 941 (1050)
++...+.++|.++|+++ ++++ ..|. |... -+.+.. .+........++.++|.++|+.+....
T Consensus 330 ---~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Gl~~---gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~--- 399 (445)
T PRK08593 330 ---QRSAEKGEYARKRFDQWVSKYNFVGDVRGY-GLSI---GIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVA--- 399 (445)
T ss_pred ---HHHHHHHHHHHHHHHHHHhcCCcEEEEecc-ceEE---EEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccC---
Confidence 44456778888888764 3332 1221 2221 122210 000000123578888999999875332
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 001579 942 PGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKAD 981 (1050)
Q Consensus 942 ~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~~~~~~~~ 981 (1050)
.+.+|+.|+..+|++|||+++++|.+++.++ .+|..|
T Consensus 400 ~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~---~~~~~~ 436 (445)
T PRK08593 400 GNVLRFQPPLVITYEQLDTALNTIEQAFTAL---EAGKLD 436 (445)
T ss_pred CCEEEEECCCccCHHHHHHHHHHHHHHHHHH---hccccC
Confidence 3789999999999999999999999998765 446664
No 229
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.67 E-value=2.3e-14 Score=167.27 Aligned_cols=274 Identities=16% Similarity=0.144 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch--
Q 001579 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1050)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 289 (1050)
...++++.+|++.|.+. +.++.+|++++.+++.. +. +||+||+++..|+++...+...++..|++++++|..
T Consensus 55 ~~~~le~~lA~l~g~~~--~v~~~sG~~ai~~~l~~--l~--~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~ 128 (390)
T PRK08064 55 TREALEDIIAELEGGTK--GFAFASGMAAISTAFLL--LS--KGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNL 128 (390)
T ss_pred hHHHHHHHHHHHhCCCC--eEEECCHHHHHHHHHHH--hC--CCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCH
Confidence 34567789999999874 56778888877655532 22 789999999999998888876677789999998764
Q ss_pred -hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCC
Q 001579 290 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1050)
Q Consensus 290 -~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~ 365 (1050)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+. ..+.+....|.++|+|+++.|+ |.|++|.+
T Consensus 129 ~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~-a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~- 206 (390)
T PRK08064 129 EEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDN-TFLTPLLQKPLDLGADVVLHSATKFLAGHSD- 206 (390)
T ss_pred HHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEEC-CCCcccccCchhhCCcEEEeecceeccCCcc-
Confidence 4555 7788999999998 689999999999999999999999953 3444544556789999999998 77664422
Q ss_pred CCcceEEEEEeh-hhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHH
Q 001579 366 GGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1050)
Q Consensus 366 GGP~~G~la~~~-~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~ 444 (1050)
--+|++++++ ++.+++.. .|.. .+++. .+. -+ |+...|-+-+.
T Consensus 207 --~laG~~v~~~~~~~~~l~~-------------------------~~~~---~g~~~-~~~---~a--~l~~~gl~tl~ 250 (390)
T PRK08064 207 --VLAGLAVVKDEELAQKLYF-------------------------LQNS---FGAVL-GVQ---DC--WLVLRGLKTLH 250 (390)
T ss_pred --ceeEEEEeCCHHHHHHHHH-------------------------HHHh---cCCCC-CHH---HH--HHHHcccCcHH
Confidence 1257777753 45444310 0000 01110 011 11 12334444455
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CccEEEEecCCHHHHHHHHHHcCce-----ee--
Q 001579 445 TIAQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCADAHAIASAAYKIEMN-----LR-- 500 (1050)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~G~~~-l~~~-----~-----------~~~~v~i~~~~~~~i~~~L~~~GI~-----~~-- 500 (1050)
...++..+++..+++.|++.+.+. ++-+ + +...|+|.+++..++.+.+...++. +.
T Consensus 251 ~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~ 330 (390)
T PRK08064 251 VRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPVFAVSLGAV 330 (390)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcceEcccCCCC
Confidence 677778888999999998875332 2211 1 1125777776533444444444551 11
Q ss_pred ---------------------e--ecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 501 ---------------------V--VDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 501 ---------------------~--~~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
. +.++.||+|++..++++.|++|.++|..
T Consensus 331 ~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~ 382 (390)
T PRK08064 331 ESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSY 382 (390)
T ss_pred cceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHh
Confidence 0 1257899999999999999999999974
No 230
>PLN02822 serine palmitoyltransferase
Probab=99.67 E-value=1.9e-14 Score=172.16 Aligned_cols=299 Identities=14% Similarity=0.144 Sum_probs=190.2
Q ss_pred ccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V 707 (1050)
-|..+...++++.|++++|.+...++. +|.++.++ ++++|- +++|+|+++..+|++....+.+.|.+++.+
T Consensus 150 yg~~~~~~~Lee~La~~~~~~~~i~~s-~G~~a~~s---ai~a~~-----~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~ 220 (481)
T PLN02822 150 YGTIDVHLDCETKIAKFLGTPDSILYS-YGLSTIFS---VIPAFC-----KKGDIIVADEGVHWGIQNGLYLSRSTIVYF 220 (481)
T ss_pred ccCHHHHHHHHHHHHHHhCCCCEEEEC-CHHHHHHH---HHHHhC-----CCCCEEEEeCCccHHHHHHHHHcCCeEEEE
Confidence 356777889999999999987543444 45444433 455441 256888888888877666678889999999
Q ss_pred cCCCCCCCCHHHHHHHHHcCC------CCE-EEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCC
Q 001579 708 GTDAKGNINIEELRKAAEANR------DNL-STLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1050)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~~------~~t-aaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p 779 (1050)
+.+ |.++++..+++.. +++ ++|+++.+ +.+|.+. ++++|+++|++||+++++|.++.. +.+.+.
T Consensus 221 ~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~-~L~~i~~l~~k~~~~LIvDEa~s~--gvlG~~ 292 (481)
T PLN02822 221 KHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIA-PLDEIVRLKEKYRFRVLLDESNSF--GVLGKS 292 (481)
T ss_pred CCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCccc--cccCCC
Confidence 874 6677777665421 234 67777766 4689887 799999999999999999999753 333322
Q ss_pred C-----cc-----cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhh
Q 001579 780 G-----YI-----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1050)
Q Consensus 780 g-----~~-----GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~ 849 (1050)
| .+ ..|+++++++|+|+++ | |++++++++++.+... .. ....+++. .
T Consensus 293 G~G~~e~~~v~~~~~dii~~s~sKalg~~------G-G~i~g~~~ii~~~~~~--~~------------~~~fsa~l--P 349 (481)
T PLN02822 293 GRGLSEHFGVPIEKIDIITAAMGHALATE------G-GFCTGSARVVDHQRLS--SS------------GYVFSASL--P 349 (481)
T ss_pred CCChHHHcCCCCCCCeEEEecchhhhhhC------C-eEEEcCHHHHHHHHhc--CC------------ceeecccc--C
Confidence 2 12 4689999999998532 2 7888887766543210 00 00111110 0
Q ss_pred HHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCC---HHHHH
Q 001579 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIE---PEDVA 924 (1050)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~---~~~va 924 (1050)
+..+.++.+.+..+.. ..+..++..++++++.++|++. +.+..+ ..++. +.+.++.......-+ ..+++
T Consensus 350 p~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~-~~spi---~~l~l~~~~~~~~~~~~~~~~~~ 423 (481)
T PLN02822 350 PYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSDIPGLSIGSN-TLSPI---VFLHLEKSTGSAKEDLSLLEHIA 423 (481)
T ss_pred HHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcCCcccCCC-CCCCE---EEEEeCCCcccccchHHHHHHHH
Confidence 1222233344544422 2345566778899999999875 333211 11232 223433100000001 35789
Q ss_pred HHHH-HCCcccCCCCCC------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 925 KRLM-DYGFHGPTMSWP------VPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 925 krL~-d~Gi~~~~~~~p------v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
++|. ++||.+....+| .+..+||+++..+|++|||+++++|++++.++
T Consensus 424 ~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 424 DRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASV 478 (481)
T ss_pred HHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 9987 889986532222 23579999999999999999999999887765
No 231
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.67 E-value=3.3e-14 Score=165.18 Aligned_cols=211 Identities=19% Similarity=0.203 Sum_probs=153.9
Q ss_pred HHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hhh
Q 001579 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (1050)
Q Consensus 215 e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~l 291 (1050)
++++.+|+|.|.+ ++.++.+|++|+.++++++ +. +||+||+++..|+.+...+....+.+|+++..++. +++
T Consensus 65 ~Le~~iA~le~~~--~~~~~~sG~~Ai~~~l~al-l~--~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l 139 (394)
T PRK09028 65 AFQAAIVELEGGA--GTALYPSGAAAISNALLSF-LK--AGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGI 139 (394)
T ss_pred HHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHH-hC--CCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHH
Confidence 4668999998875 4789999999888887765 33 89999999999988887665445678999988875 456
Q ss_pred hc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCCc
Q 001579 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1050)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GGP 368 (1050)
++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++||||++.|+ |++++| |.-
T Consensus 140 ~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD-~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh---~d~ 215 (394)
T PRK09028 140 RELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLD-NTWASPINSRPFEMGVDISIQAATKYIVGH---SDV 215 (394)
T ss_pred HHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCccccccCCccccCceEEEEeCCeEecCC---CCE
Confidence 66 7889999999998 78999999999999999999999994 56666777788999999999999 777543 222
Q ss_pred ceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHH
Q 001579 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1050)
Q Consensus 369 ~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~ 448 (1050)
-+|.++.++++.+++- ..++.-|. + .++. ..|+...|-+-|.-+.+
T Consensus 216 ~~G~~~~~~~~~~~l~-------------------------~~~~~~G~--~--~~p~-----~a~l~~rgl~TL~lR~~ 261 (394)
T PRK09028 216 MLGTATANEKHWDQLR-------------------------EHSYLMGQ--C--TSPD-----DVYLAMRGLRTLGVRLA 261 (394)
T ss_pred EEEEEECCHHHHHHHH-------------------------HHHHhcCC--C--CCHH-----HHHHHHcccCcHHHHHH
Confidence 2455554544433220 00011110 0 0111 12445566666777778
Q ss_pred HHHHHHHHHHHHHhcCCCEE
Q 001579 449 RVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 449 ~~~~~a~~l~~~L~~~G~~~ 468 (1050)
+..++|..+++.|++.+.++
T Consensus 262 ~~~~na~~la~~L~~~p~v~ 281 (394)
T PRK09028 262 QHEKNALKVANWLATRPEVD 281 (394)
T ss_pred HHHHHHHHHHHHHhcCCCcc
Confidence 88899999999999875443
No 232
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.66 E-value=8.4e-16 Score=177.04 Aligned_cols=289 Identities=21% Similarity=0.230 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~ 712 (1050)
.+.|.|+.+++++|.+.+.+.+|+++.|+.++++++- .++++||++.+.|-+....+.+.|++++.++...+
T Consensus 67 ~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~--------~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~ 138 (417)
T PF01276_consen 67 IIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALC--------RPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDN 138 (417)
T ss_dssp HHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHT--------TTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhc--------CCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCcc
Confidence 3789999999999999988888988989988877653 25689999999998888889999999999876422
Q ss_pred -----CCCCH-----HHHHHHHHcCCCCEE---EEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccC-C
Q 001579 713 -----GNINI-----EELRKAAEANRDNLS---TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-S 778 (1050)
Q Consensus 713 -----g~iD~-----e~L~~~i~~~~~~ta---aV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~-~ 778 (1050)
+.+++ ++++++|+++ ++.+ +|++++|++.|++. |+++|+++||++|..|+||+|+... .+|. .
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~-p~~k~~~~vvlt~PTY~Gv~~-di~~I~~~~h~~~~~llvDEAhGah-~~F~~l 215 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEH-PDAKAPRLVVLTSPTYYGVCY-DIKEIAEICHKHGIPLLVDEAHGAH-FGFHPL 215 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHC-TTCHCESEEEEESS-TTSEEE--HHHHHHHHCCTECEEEEE-TT-TT-GGCSGG
T ss_pred ccCCccCCChhhhhHHHHHHHHHhC-ccccCceEEEEeCCCCCeEEE-CHHHHHHHhcccCCEEEEEcccccc-ccCCCC
Confidence 35677 9999999987 4444 49999999999998 8999999999999999999997532 2232 1
Q ss_pred C---CcccCc-------EEEeCCccccccCCCCCCCcceeeeecccc-cCCCCCCccccCCCCCCCCCCCCCCCCCcchh
Q 001579 779 P---GYIGAD-------VCHLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1050)
Q Consensus 779 p---g~~GaD-------v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l-~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~ 847 (1050)
| -.+|+| +++.|.||+++.- -..+.|-++... +.. ..+.... .-...++.
T Consensus 216 p~~a~~~gad~~~~~~~~vvqS~HKtL~al-----tQts~lh~~~~~~v~~---~~~~~~l--------~~~~TTSP--- 276 (417)
T PF01276_consen 216 PRSALALGADRPNDPGIIVVQSTHKTLPAL-----TQTSMLHVKGDRIVDH---ERVNEAL--------SMHQTTSP--- 276 (417)
T ss_dssp GTTCSSTTSS-CTSBEEEEEEEHHHHSSS------TT-EEEEEETCCCTTH---HHHHHHH--------HHHS-SS----
T ss_pred ccchhhccCccccccceeeeechhhccccc-----ccceEEEecCCCcccH---HHHHHHH--------HHHcCCCh---
Confidence 2 347999 9999999998522 234666666543 110 0000000 00011121
Q ss_pred hhHHHHHHHHHHHHHH-ChhhHHHHHHHHHHHHHHHHHHHh---cc--CCeee----cCCC------Cccce--------
Q 001579 848 GSALILPISYTYIAMM-GSKGLTEASKIAILNANYMAKRLE---KH--YPILF----RGVN------GTVAH-------- 903 (1050)
Q Consensus 848 g~~~~~~~a~a~l~~l-G~eGl~~~a~~~~~~a~yl~~~L~---~~--~~v~~----~g~~------g~~~~-------- 903 (1050)
+..+++..=....+| +.+| ++..++.+..+..++++|+ ++ +.+.. .++. +...|
T Consensus 277 -SY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~ 354 (417)
T PF01276_consen 277 -SYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADD 354 (417)
T ss_dssp --HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TT
T ss_pred -HHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccC
Confidence 223332222223444 4455 3455667788889999983 33 33221 1110 00111
Q ss_pred e-------EEEeccccc-----ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHH
Q 001579 904 E-------FIVDLRGLK-----NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKE 956 (1050)
Q Consensus 904 e-------~i~~~~~~~-----~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~e 956 (1050)
. +++.++.+. .+.|+++..+.+.|.++||.+.... ..++.+-+|...|++
T Consensus 355 ~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d---~~~vL~l~t~G~t~~ 416 (417)
T PF01276_consen 355 YYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTD---LYNVLFLFTIGDTKE 416 (417)
T ss_dssp SEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEE---SSEEEEE--TTS-HH
T ss_pred ccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEecc---CccEEEEecCCCCCC
Confidence 1 223331110 2357899999999999999875443 356777777777664
No 233
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.66 E-value=2.9e-14 Score=168.23 Aligned_cols=331 Identities=16% Similarity=0.200 Sum_probs=205.3
Q ss_pred cccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHHHH
Q 001579 593 PLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 593 ~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair~y 671 (1050)
.||++.+++..++..+. ....+.....+. .+...++.++|+++++.+ ...++.++|+++.++++...|.|
T Consensus 58 ~lGh~~p~v~~ai~~~~-~~~~~~~~~~~~--------~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~ 128 (427)
T TIGR00508 58 IHGYNHPRLNAAAQKQI-DKMSHVMFGGFT--------HKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQY 128 (427)
T ss_pred cCCCCCHHHHHHHHHHH-HhcCCccccccC--------CHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHH
Confidence 67888776666555542 221111111111 122346788888887543 23467789999999999988887
Q ss_pred HHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC-------------EEEEEcCCCC------CCCCHHHHHHHHHcCCCCE
Q 001579 672 HKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAK------GNINIEELRKAAEANRDNL 731 (1050)
Q Consensus 672 ~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~-------------~vv~V~~d~~------g~iD~e~L~~~i~~~~~~t 731 (1050)
...+|..+|.+|| ...++||....+..+.|- .+..++.... ..-|+++++++++++.+++
T Consensus 129 ~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~v 208 (427)
T TIGR00508 129 WQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEI 208 (427)
T ss_pred HHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcE
Confidence 6555544455555 678899976544333221 1122322111 0126788889998766788
Q ss_pred EEEEEEcC-C-Cccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCc--------ccCcEEEeCCccccccC
Q 001579 732 STLMVTYP-S-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIP 798 (1050)
Q Consensus 732 aaV~vt~P-n-~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~--------~GaDv~~~~~hKtf~~P 798 (1050)
++|+++.- . ..|+.. +++++|+++|+++|+++++|.++ .|+.+.|. ..+|++++ .|.|+
T Consensus 209 aavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~----tG~Gr~G~~~~~~~~~v~pDi~~~--gK~l~-- 280 (427)
T TIGR00508 209 AAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA----TGFGRTGKLFACEHAGVVPDILCV--GKALT-- 280 (427)
T ss_pred EEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCcCCccchhhhcCCCCCEEEe--chhhh--
Confidence 88888852 3 344432 37999999999999999999875 34445443 24688875 58873
Q ss_pred CCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHH
Q 001579 799 HGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 878 (1050)
Q Consensus 799 ~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~ 878 (1050)
+|-..++.+++++++...+.....+ . ....+++.|++..++++.+.+..+..+.+. ++...+
T Consensus 281 --gG~~p~~a~~~~~~~~~~~~~~~~~------------~-~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~---~~~~~~ 342 (427)
T TIGR00508 281 --GGYMTLSATVTTDKVAQTISSGEAG------------C-FMHGPTFMGNPLACAVAEASLAILLEGEWQ---KQVSAI 342 (427)
T ss_pred --cCcccceEEEEcHHHHHHHhcCCCC------------c-cccCCCCCcCHHHHHHHHHHHHHHHhCCHH---HHHHHH
Confidence 3324567777777765544211000 0 001112335666777788888887665543 455577
Q ss_pred HHHHHHHHhcc--CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCC
Q 001579 879 ANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESES 954 (1050)
Q Consensus 879 a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t 954 (1050)
.++|.++|+++ .... ..|. |.. +.+.+.. ......+.++|.++|+.+... ...++++|+..+|
T Consensus 343 ~~~l~~~L~~l~~~~~i~~vrg~-G~~---~~i~~~~-----~~~~~~~~~~l~~~Gv~~~~~----~~~l~~~ppl~~t 409 (427)
T TIGR00508 343 ENQLKRELSPLRKNPVVKDVRVL-GAI---GVVEMYK-----PVNVEELQKKFVEQGVWIRPF----GKLIYVMPPYIIT 409 (427)
T ss_pred HHHHHHHHHHhhcCCCEEeEecc-ccE---EEEEECC-----ccCHHHHHHHHHHCCeEEEec----CCEEEEECCCCCC
Confidence 88999999875 2211 1111 222 2233321 124678999999999997532 3579999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001579 955 KEELDRYCDALISIREE 971 (1050)
Q Consensus 955 ~eeid~fv~aL~~i~~e 971 (1050)
++|||++++++.+++.|
T Consensus 410 ~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 410 TEQLQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998754
No 234
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.66 E-value=2e-14 Score=165.66 Aligned_cols=299 Identities=16% Similarity=0.181 Sum_probs=196.0
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
..+|+|+.++..++..+.... .+... -|.. +...++.+.+++++|.+.+ ++.+||+++.++++.++|.|
T Consensus 36 ~~lGh~~p~v~~ai~~ql~~~-~~~~~-~~~~--------~~~~~la~~l~~~~~~~~v-~~~~SGseA~e~Alklar~~ 104 (364)
T PRK04013 36 NVLGHNHPEWVEEMSEQLEKL-VVAGP-MFEH--------EEKEEMLEELSKWVNYEYV-YMGNSGTEAVEAALKFARLY 104 (364)
T ss_pred ccCCCCCHHHHHHHHHHHHhc-CCccC-CcCC--------HHHHHHHHHHHhhcCCCEE-EEeCchHHHHHHHHHHHHHH
Confidence 457888877776665553221 11110 1111 2345788889999988765 56799999999998888876
Q ss_pred HHhcCCCCCCEEE-EcCCCCCccHHHHHhC-------CC-----EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEc
Q 001579 672 HKARGDHHRNVCI-IPVSAHGTNPATAAMC-------GM-----KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY 738 (1050)
Q Consensus 672 ~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~-------G~-----~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~ 738 (1050)
+ +|++|| ...++||..-.+.... ++ .++.++. .|+++++++++ +++++|+++.
T Consensus 105 ---~---gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~---~~~aAvivEp 170 (364)
T PRK04013 105 ---T---GRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-----NDVEAAKEAIT---KETAAVIFEP 170 (364)
T ss_pred ---h---CCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-----CCHHHHHHHhc---CCcEEEEEcC
Confidence 2 345555 5678999875553321 11 1233333 37889999986 7899999886
Q ss_pred CC-CccccccC---HHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCccccccCCCCCCCcc
Q 001579 739 PS-THGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFCIPHGGGGPGM 806 (1050)
Q Consensus 739 Pn-~~Gv~~~d---i~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~hKtf~~P~g~GGPg~ 806 (1050)
.. ..|++.++ +++|.++|+++|++++.|++ +.|+ +.|.+ .+|++++ .|.++ +|-| +
T Consensus 171 i~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv----~tG~-RtG~~~a~~~~gv~PDiv~~--gK~lg----gG~P-~ 238 (364)
T PRK04013 171 IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEV----QSGL-RTGKFLAIEHYKVEPDIVTM--GKGIG----NGVP-V 238 (364)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech----hhcC-CCCchhHHHhcCCCCCEEEe--ccccc----CCce-e
Confidence 43 45666545 99999999999999999987 4566 66653 3688887 58774 4434 5
Q ss_pred eeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHH
Q 001579 807 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1050)
Q Consensus 807 G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L 886 (1050)
|.+..++++.+ +. ..+++.|+++.++++.+.+..+-++++.+.++.. + ++|
T Consensus 239 ~a~~~~~~~~~---~~-------------------~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l 289 (364)
T PRK04013 239 SLTLTNFDVER---GK-------------------HGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK------F-IEI 289 (364)
T ss_pred EEEEecccccC---CC-------------------cCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH------H-HHh
Confidence 55555655421 10 0112456778888899999999888876655432 2 233
Q ss_pred hc-c-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHH
Q 001579 887 EK-H-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDA 964 (1050)
Q Consensus 887 ~~-~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~a 964 (1050)
.. . .++ .|. | .+ +-+++. .....+.+++.++|+.+.... .+.+|+.|+...|++|+|.+++.
T Consensus 290 ~~~~v~~v--RG~-G-l~--~gve~~-------~~~~~i~~~~~~~Gll~~~~g---~~vlr~~Ppl~it~~~i~~~~~~ 353 (364)
T PRK04013 290 KGERVVTT--RGR-G-LM--IGIVLK-------KPVGKYVEELQNRGYLVHTAG---QRVIRLLPPLIISKDTMEEAKSA 353 (364)
T ss_pred ccCcceee--eeC-c-EE--EEEEeC-------CcHHHHHHHHHhCCcEEeeCC---CCEEEEeCCcccCHHHHHHHHHH
Confidence 22 1 122 221 2 22 223332 125678899999999875332 37899999999999999999999
Q ss_pred HHHHHHHH
Q 001579 965 LISIREEI 972 (1050)
Q Consensus 965 L~~i~~ei 972 (1050)
|.+++.++
T Consensus 354 l~~~l~~~ 361 (364)
T PRK04013 354 IEGVINDI 361 (364)
T ss_pred HHHHHHHH
Confidence 99988753
No 235
>PRK09082 methionine aminotransferase; Validated
Probab=99.66 E-value=1.4e-14 Score=169.13 Aligned_cols=344 Identities=13% Similarity=0.160 Sum_probs=208.0
Q ss_pred HHHHHHHHhccccCcccccccccccccCcchhhhhcccccccc-ccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCe--
Q 001579 573 LLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS-- 649 (1050)
Q Consensus 573 ~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f-~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~-- 649 (1050)
+++.+..+.+++ .+|.||.+.+.++............. ...+.|.+ .+|..++.+++++++.+.+|.+.
T Consensus 19 ~~~~~~~~~~~~-----~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~~a~~l~~~~~~~~~~ 90 (386)
T PRK09082 19 IFTVMSALAAEH-----GAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPP---MTGVAALREAIAAKTARLYGRQYDA 90 (386)
T ss_pred HHHHHHHHHhhC-----CEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCC---CCCcHHHHHHHHHHHHHHhCCCCCC
Confidence 556666655432 46778776554432211111000000 01223333 36888888899999999888752
Q ss_pred -eeeccCc-hHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC-CCCCCHHHHHHHHHc
Q 001579 650 -FSLQPNA-GAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELRKAAEA 726 (1050)
Q Consensus 650 -~~l~~~s-Ga~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~-~g~iD~e~L~~~i~~ 726 (1050)
..+..++ |+++.. ++++.+. .++++|+++...|+.+...++..|.+++.++.++ ++.+|+++++++++
T Consensus 91 ~~~i~~t~G~~~al~---~~~~~~~-----~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~- 161 (386)
T PRK09082 91 DSEITVTAGATEALF---AAILALV-----RPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS- 161 (386)
T ss_pred CCcEEEeCCHHHHHH---HHHHHHc-----CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-
Confidence 1344444 444443 3333321 2457899999888777667888999999999974 47899999999996
Q ss_pred CCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc--cCC----CCcccCcEEEeCCccccc
Q 001579 727 NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTS----PGYIGADVCHLNLHKTFC 796 (1050)
Q Consensus 727 ~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~g--l~~----pg~~GaDv~~~~~hKtf~ 796 (1050)
+++++|++++| |.+|.+- +++++|.++|+++|+++++|.++..-. .+ ... ++..+-.++..+++|+|+
T Consensus 162 --~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~ 239 (386)
T PRK09082 162 --PRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYH 239 (386)
T ss_pred --ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhcc
Confidence 67899999998 5789762 379999999999999999999863211 11 111 111223477778899886
Q ss_pred cCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHH
Q 001579 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1050)
Q Consensus 797 ~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1050)
.| |.++|++++++++...+-.. +.....+.+...+. ++..++.. +++-+++..+...
T Consensus 240 ~~----G~RiG~iv~~~~l~~~~~~~--------------~~~~~~~~~~~~q~----~~~~~l~~-~~~~~~~~~~~~~ 296 (386)
T PRK09082 240 VT----GWKVGYCVAPAALSAEFRKV--------------HQYNTFTVNTPAQL----ALADYLRA-EPEHYLELPAFYQ 296 (386)
T ss_pred ch----hhhhhhhhCCHHHHHHHHHH--------------HhhhcCCCChHHHH----HHHHHHhC-ChHHHHHHHHHHH
Confidence 44 67899999887665433110 00001111111222 12233321 3444555555666
Q ss_pred HHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHH-HHCCcccCC-CCC---C-CCCEEEEEc
Q 001579 877 LNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFHGPT-MSW---P-VPGTLMIEP 949 (1050)
Q Consensus 877 ~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL-~d~Gi~~~~-~~~---p-v~~~lrI~~ 949 (1050)
++.+++.+.|++. +++. + +.+.++ +.++++.+ .+.+..+++++| .++|+.+.. ..| + ..+.+||++
T Consensus 297 ~~~~~~~~~L~~~~~~~~-~-~~g~~~--~~~~~~~~---~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~ 369 (386)
T PRK09082 297 AKRDRFRAALANSRFKLL-P-CEGTYF--QLVDYSAI---SDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF 369 (386)
T ss_pred HHHHHHHHHHHhCCCccc-C-CCeeEE--EEEecccc---CCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe
Confidence 7788898988874 3331 1 122221 34565421 135678999987 578997533 234 2 136899998
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 001579 950 TESESKEELDRYCDALIS 967 (1050)
Q Consensus 950 te~~t~eeid~fv~aL~~ 967 (1050)
.. +++++++.++.|++
T Consensus 370 ~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 370 AK--QEETLDAAAERLCQ 385 (386)
T ss_pred cC--CHHHHHHHHHHHhh
Confidence 74 57788887777753
No 236
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.66 E-value=3.5e-14 Score=166.95 Aligned_cols=324 Identities=17% Similarity=0.179 Sum_probs=201.3
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhh--C--CC-eeeeccCchHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT--G--FD-SFSLQPNAGAAGEYAGLM 666 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~--G--~d-~~~l~~~sGa~ge~a~Ll 666 (1050)
..+|++++++..++..+.... .+.....+ ..+...++.+.|++++ + ++ .+.+..+||+++++++++
T Consensus 47 ~~lGh~~p~v~~ai~~ql~~~-~~~~~~~~--------~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~Alk 117 (412)
T TIGR02407 47 LNYGHNNPKLKQALIDYLADD-GIIHSLDM--------ATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALK 117 (412)
T ss_pred ccCCCCCHHHHHHHHHHHhhc-cceecccc--------CcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHH
Confidence 468898888877766653211 11110011 1133457778888874 2 32 244556899999999999
Q ss_pred HHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC------------CEEEEEcCCCCC---CCCHHHHHHHHHcCC--
Q 001579 667 VIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAKG---NINIEELRKAAEANR-- 728 (1050)
Q Consensus 667 air~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G------------~~vv~V~~d~~g---~iD~e~L~~~i~~~~-- 728 (1050)
.+|.| . +|++|| ...++||....+....| ..++.+|..... .-|++.+++.++++.
T Consensus 118 lAr~~---t---gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 191 (412)
T TIGR02407 118 LARKV---T---GRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSG 191 (412)
T ss_pred HHhhh---c---CCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCC
Confidence 88876 2 244555 57789998766543221 134455542111 135788999997653
Q ss_pred -CCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCc--------ccCcEEEeCCcccc
Q 001579 729 -DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTF 795 (1050)
Q Consensus 729 -~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~--------~GaDv~~~~~hKtf 795 (1050)
+++++|+++.- +..|++. ..+++|.++|+++|+++++|.+ +.|+.+.|. ..+|++++ .|++
T Consensus 192 ~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV----~tG~GRtG~~~a~~~~~v~PDi~~~--~K~l 265 (412)
T TIGR02407 192 VDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDI----QAGCGRTGTFFSFEPAGIEPDIVCL--SKSI 265 (412)
T ss_pred CCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech----hhCCCccchhHHhcccCCCCCEEEe--chhc
Confidence 46788887643 4567643 3699999999999999999987 445655543 24788876 4887
Q ss_pred ccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHH-HChhhHHHHHHH
Q 001579 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM-MGSKGLTEASKI 874 (1050)
Q Consensus 796 ~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~-lG~eGl~~~a~~ 874 (1050)
+ +||-.+|++++++++ ..+.... + .+++.|+++.++++.+.+.. +..+.+.+ +
T Consensus 266 g----~~G~pigav~~~~~~-~~~~~~~---------~---------~~T~~gnpl~~aaa~a~l~~~i~~~~l~~---~ 319 (412)
T TIGR02407 266 S----GYGLPLALTLIKPEL-DVWKPGE---------H---------NGTFRGNNLAFVTATAALEYYWSDDAFEK---A 319 (412)
T ss_pred c----CCccceeEEEEchhh-hccCCCc---------c---------CCCCCccHHHHHHHHHHHHHHhcccHHHH---H
Confidence 3 435558999988765 3322100 0 01123456666667777774 65554443 3
Q ss_pred HHHHHHHHHHHHhcc---CC-eeecCC-CCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEc
Q 001579 875 AILNANYMAKRLEKH---YP-ILFRGV-NGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 949 (1050)
Q Consensus 875 ~~~~a~yl~~~L~~~---~~-v~~~g~-~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~ 949 (1050)
.....+++.++|+.+ ++ +...-+ .|.. +.+.+.+ ......+.++|.++|+.+.... +..+.||+.|
T Consensus 320 ~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~---~~l~l~~-----~~~~~~~~~~~~~~Gv~v~~~~-~~~~~lr~~p 390 (412)
T TIGR02407 320 VQRKSEIIQERLDRIVAEYPELIKQVRGRGLM---QGIECGD-----GDLAGKIAKAAFENGLIIETSG-PNDEVIKLLP 390 (412)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEeeecceeE---EEEEecC-----hHHHHHHHHHHHHCCCEEeccC-CCCCEEEEEC
Confidence 445677888888753 22 211111 1221 2344431 1235678899999999875332 2247899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q 001579 950 TESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 950 te~~t~eeid~fv~aL~~i~~e 971 (1050)
+..+|++|+|+++++|.++++|
T Consensus 391 ~l~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 391 PLTIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCCCCHHHHHHHHHHHHHHHhC
Confidence 9999999999999999988754
No 237
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.66 E-value=1.9e-14 Score=167.59 Aligned_cols=305 Identities=17% Similarity=0.127 Sum_probs=188.3
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC-
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~- 712 (1050)
..++++.+++++|.+.+ +..++|++|...++ +++ +..++++||++...|..+...+...|++++.++++++
T Consensus 35 ~~~le~~la~~~g~~~~-v~~~sgt~al~lal---~al----~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQHA-IAVSSATAGMHITL---MAL----GIGPGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHH---HHc----CCCCCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCc
Confidence 45889999999999864 55677776654333 322 1235689999988776666667789999999999876
Q ss_pred CCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccC-CCCcccCcEEEeCC
Q 001579 713 GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGYIGADVCHLNL 791 (1050)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~-~pg~~GaDv~~~~~ 791 (1050)
+.+|+++|+++++ ++|++|+.+++ +|... |+++|+++|+++|+++++|+++..+..-.. ..|.+|.|+..++.
T Consensus 107 ~~~d~~~l~~~i~---~~tkav~~~~~--~G~~~-d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~ 180 (379)
T PRK11658 107 LMVTPEAIEAAIT---PRTKAIIPVHY--AGAPA-DLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHA 180 (379)
T ss_pred CCcCHHHHHHhcc---cCCeEEEEeCC--CCCcC-CHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCC
Confidence 5799999999997 78999987765 68876 899999999999999999999754322111 24677877777777
Q ss_pred ccccccCCCCCCCcceeeeec-ccccCCCCC-CccccCCCC---CCCCC--C--C-CCC-CCCcchhhhHHHHHHHHHHH
Q 001579 792 HKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI---PAPEK--S--Q-PLG-TIAAAPWGSALILPISYTYI 860 (1050)
Q Consensus 792 hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg-~~vg~~~~~---~~~~~--~--~-~t~-~i~sa~~g~~~~~~~a~a~l 860 (1050)
+|.++ + +..|+++.+ +++...+.. +..|...+. ...++ . . ..+ +.. . +.+.+ |..+.
T Consensus 181 ~K~l~-----~-g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~--~--~~l~A--Al~~~ 248 (379)
T PRK11658 181 IKNIT-----C-AEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYN--L--ADINA--AIALV 248 (379)
T ss_pred CCcCc-----c-cCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccC--c--CHHHH--HHHHH
Confidence 77663 2 234566664 444332210 001111000 00000 0 0 000 100 0 11222 22222
Q ss_pred HHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCee-ecCCC-CccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC
Q 001579 861 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPIL-FRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM 937 (1050)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~-~~g~~-g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~ 937 (1050)
. .+++.+..++..++++++.+.|+++ +..+ .+... ....+.+.+.+.. ...+.+.+++.++|.++||.....
T Consensus 249 q---l~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~r~~~~~~L~~~gI~~~~~ 323 (379)
T PRK11658 249 Q---LAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDE--ERCGISRDALMEALKERGIGTGLH 323 (379)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECC--ccccCCHHHHHHHHHHCCCCCccc
Confidence 2 3567777777778888999999875 2211 11110 1122344444421 012457889999999999875421
Q ss_pred -----------------CCCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 938 -----------------SWPV-----PGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 938 -----------------~~pv-----~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
.+|. ...+.+-.....|.+|+++++++++++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 324 FRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred CcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 1221 2345555566688999999999999875
No 238
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.66 E-value=1.8e-14 Score=167.45 Aligned_cols=242 Identities=18% Similarity=0.182 Sum_probs=169.4
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---h
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~ 289 (1050)
..++++.+++++|.+ .+.++.+|++++.+++ .. + ++||+||+++..|+++...++..++.+|++++++|. +
T Consensus 49 ~~~le~~la~l~g~~--~~l~~~sG~~al~~~l-~l-l--~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~ 122 (378)
T TIGR01329 49 RTALESLLAKLDKAD--RAFAFSSGMAALDVIT-RL-L--NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLD 122 (378)
T ss_pred HHHHHHHHHHHhCCC--cEEEECCHHHHHHHHH-HH-h--CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHH
Confidence 456789999999985 3677888887665533 22 2 389999999999999988887767778999999976 4
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+. .++.+....|.++|+|++++|+ |.+++|.
T Consensus 123 ~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~-a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~--- 198 (378)
T TIGR01329 123 KVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDN-TMMSPLLCNPLELGADIVYHSATKFLAGHS--- 198 (378)
T ss_pred HHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEEC-CCcccccCChhhcCCcEEEEecceeccCCc---
Confidence 5555 7789999999998 789999999999999999999999943 4555555567789999999998 7675432
Q ss_pred CcceEEEEEehh-hhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001579 367 GPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1050)
Q Consensus 367 GP~~G~la~~~~-~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1050)
+.-+|+++++++ +.+++. .+|+..|+ +. .+. .+ |+...+.+-+..
T Consensus 199 ~~~~G~v~~~~~~~~~~~~-------------------------~~~~~~G~---~~-~~~---~a--~l~~~~l~tl~~ 244 (378)
T TIGR01329 199 DVMAGVLAVKGEEIAKKVY-------------------------FLQNSTGS---GL-APF---DC--WLLLRGIKTLAI 244 (378)
T ss_pred cceeEEEEeCcHHHHHHHH-------------------------HHHHhcCC---cC-CHH---HH--HHHHccCCCHHH
Confidence 123688888654 323220 01111110 00 111 11 334566677888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EcC----C-C-----------CccEEEEecCC---HHHHHHHHHHcCce
Q 001579 446 IAQRVHGLAGTFALGLKKLGTVE-VQG----L-P-----------FFDTVKVKCAD---AHAIASAAYKIEMN 498 (1050)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~-l~~----~-~-----------~~~~v~i~~~~---~~~i~~~L~~~GI~ 498 (1050)
+.++...++..+++.|++...++ +.- . + +...|+|.+.+ +.++.+.|...+|.
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~ 317 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSIT 317 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccc
Confidence 88888999999999998764332 221 1 1 11357777755 56888888665553
No 239
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.66 E-value=2.9e-14 Score=168.42 Aligned_cols=319 Identities=16% Similarity=0.204 Sum_probs=200.0
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC-CCeeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G-~d~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..+|+|.+.+..++..+......+...| +...++.+.|+++++ ++. .++.++|++++++++..+|.
T Consensus 65 ~~lGh~~p~v~~ai~~q~~~~~~~~~~~------------~~~~~la~~l~~~~p~~~~-v~f~~sGseA~e~AlklAr~ 131 (428)
T PRK12389 65 IITGHAHPHITKAITEAAENGVLYGTPT------------ELEIEFAKMLKEAIPSLEK-VRFVNSGTEAVMTTIRVARA 131 (428)
T ss_pred cccCCCCHHHHHHHHHHHHhCCccCCCC------------HHHHHHHHHHHHhCCCCcE-EEEeCCHHHHHHHHHHHHHH
Confidence 4588998888777666532211111111 123477888888874 444 36688999999999998887
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC-------------------EEEEEcCCCCCCCCHHHHHHHHHcCCCC
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------------KIVSVGTDAKGNINIEELRKAAEANRDN 730 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~-------------------~vv~V~~d~~g~iD~e~L~~~i~~~~~~ 730 (1050)
|. +|++|| ...++||....+....|. ++..++. .|+++|++++++++++
T Consensus 132 ~t------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~ 200 (428)
T PRK12389 132 YT------GRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPF-----NDIEALKEALDKWGDE 200 (428)
T ss_pred hh------CCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCC-----CCHHHHHHHHHhcCCc
Confidence 72 244555 577899977655433221 1122222 3799999999877778
Q ss_pred EEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCc------c--cCcEEEeCCccccccC
Q 001579 731 LSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIP 798 (1050)
Q Consensus 731 taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~------~--GaDv~~~~~hKtf~~P 798 (1050)
+++|+++.. +..|++.+ .+++|.++|+++|+++++|.+ +.|+ +.+. + -+|++++ .|.++
T Consensus 201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV----~tG~-Rt~~~~a~~~~gv~PDivt~--gK~lg-- 271 (428)
T PRK12389 201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEV----ITAF-RFMYGGAQDLLGVEPDLTAL--GKIIG-- 271 (428)
T ss_pred EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcc----cccc-ccCcchhhHHhCCCCCeeee--chhhc--
Confidence 988888753 45677752 299999999999999999987 4455 3321 2 3688766 58763
Q ss_pred CCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHH
Q 001579 799 HGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 878 (1050)
Q Consensus 799 ~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~ 878 (1050)
+|-| +|.+++++++.+.+... +. ....+++.|+++.++++.+.|..+.++++. ++...+
T Consensus 272 --gG~P-i~av~~~~~i~~~~~~~--~~-------------~~~~~T~~gnpl~~Aaala~L~~l~~~~l~---~~~~~~ 330 (428)
T PRK12389 272 --GGLP-IGAYGGRKDIMEQVAPL--GP-------------AYQAGTMAGNPASMAAGIACLEVLQQEGVY---EKLDRL 330 (428)
T ss_pred --CCCc-eeEEeEHHHHHhhhccC--CC-------------cccccCCccCHHHHHHHHHHHHHHhcccHH---HHHHHH
Confidence 4444 66678888877665310 00 011122446778888889999988776644 345567
Q ss_pred HHHHHHHHhcc---CCee--ecCCCCccceeEEEecccccc----c--CCCCHHHHHHHHHHCCcccCCCCCCCCCEEEE
Q 001579 879 ANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN----T--AGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMI 947 (1050)
Q Consensus 879 a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~----~--~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI 947 (1050)
.++|.++|+++ +++. ..+-.+ .+ .+.+...+... . .......+.+.|.++|+.+....+ +.+
T Consensus 331 g~~l~~~L~~l~~~~~~~~~v~r~~g-~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~-- 403 (428)
T PRK12389 331 GAMLEEGILEAAEKHGITITINRLKG-AL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKY---EAW-- 403 (428)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEecCc-EE-EEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCC---CCe--
Confidence 88999998764 3321 111112 21 12221111000 0 000135678889999998754322 223
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 948 EPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 948 ~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
.|+..+|++|||++++++.+++.+
T Consensus 404 ~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 404 FLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred eecCCCCHHHHHHHHHHHHHHHHh
Confidence 467789999999999999988754
No 240
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.66 E-value=3.8e-14 Score=168.17 Aligned_cols=326 Identities=16% Similarity=0.147 Sum_probs=199.1
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC--eeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d--~~~l~~~sGa~ge~a~Llair 669 (1050)
..+|+|..++..++..+... ..+ ++.. ....+...++.+.|+++++.. .-.++.++|++++++++..+|
T Consensus 68 ~~lGh~~p~v~~ai~~q~~~-~~~--~~~~------~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr 138 (443)
T PRK06058 68 TSVGNSAPRVVEAVREQVAR-FTH--TCFM------VTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIAR 138 (443)
T ss_pred hccCCCCHHHHHHHHHHHHh-ccC--cccc------ccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 46788887777666655321 111 1110 011134557888999988633 234678899999999988888
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC--------C-----EEEEEcCCCCCC------CC--------HHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M-----KIVSVGTDAKGN------IN--------IEELR 721 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G--------~-----~vv~V~~d~~g~------iD--------~e~L~ 721 (1050)
.| . +|++|| ...++||....+..+.+ + .+..+++....+ .+ ++.|+
T Consensus 139 ~~---t---gr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 212 (443)
T PRK06058 139 SY---T---GRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIE 212 (443)
T ss_pred Hh---h---CCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHH
Confidence 76 2 234555 56689998866544322 1 123333211111 11 22233
Q ss_pred HHHHcCCCCEEEEEEEcCC-Cccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEe
Q 001579 722 KAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHL 789 (1050)
Q Consensus 722 ~~i~~~~~~taaV~vt~Pn-~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~ 789 (1050)
+.+. .+++++|+++.-. ..|++. +.+++|.++|++||+++++|.+ +.|+.+.|.+ -+|++++
T Consensus 213 ~~~~--~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV----~tGfgRtG~~fa~~~~gv~PDiv~~ 286 (443)
T PRK06058 213 KQVG--ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEV----QTGFARTGAWFACEHEGIVPDLITT 286 (443)
T ss_pred HhhC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc----ccCCCcChhhhHHHhcCCCCCEEEE
Confidence 3332 3678888876433 456664 2499999999999999999986 5566666632 3588887
Q ss_pred CCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHH
Q 001579 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1050)
Q Consensus 790 ~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1050)
.|.++ ||-.+|.+++++++.+.+.... ..+++.|++..++++.+.|..+..+++.
T Consensus 287 --gK~l~-----~G~Pi~av~~~~~i~~~~~~~~------------------~~~T~~gnpl~~aaa~a~L~~~~~~~l~ 341 (443)
T PRK06058 287 --AKGIA-----GGLPLSAVTGRAEIMDAPHPGG------------------LGGTYGGNPVACAAALAAIETIEEDDLV 341 (443)
T ss_pred --ccccc-----CCCccEEEEEcHHHHhhccCCC------------------CCCCCCCCHHHHHHHHHHHHHHHHcCHH
Confidence 48774 4455888888887766542110 0112345667777888888888766554
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEecccc--cccCCCCHHHHHHHHHHCCcccCCCCCCCC
Q 001579 870 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGL--KNTAGIEPEDVAKRLMDYGFHGPTMSWPVP 942 (1050)
Q Consensus 870 ~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~--~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~ 942 (1050)
+ +.....++|.++|+++ ++++ ..|. |.. +.+.+.+- +.........+.++|.++|+.+.... +.+
T Consensus 342 ~---~~~~~g~~l~~~L~~l~~~~~~i~~vrg~-G~~---~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~-~~~ 413 (443)
T PRK06058 342 A---RARQIEALMTDRLRALAAEDDRIGDVRGR-GAM---IAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCG-TYG 413 (443)
T ss_pred H---HHHHHHHHHHHHHHHHHhhCCcEEeeecc-ceE---EEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccC-CCC
Confidence 3 3446688999999874 3432 2232 322 22222110 00000113467777889999874322 124
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 943 GTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 943 ~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
++||+.|+..+|++|||+++++|.+++++
T Consensus 414 ~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 414 NVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred CEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999988764
No 241
>PRK12403 putative aminotransferase; Provisional
Probab=99.65 E-value=7.3e-14 Score=166.23 Aligned_cols=337 Identities=17% Similarity=0.206 Sum_probs=205.7
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llair 669 (1050)
..||++++++..++..+.-.. .+. +.+ ..+..+...++.+.|+++++ ++.+ ++.+||++++++++.++|
T Consensus 66 ~~lGh~hp~v~~A~~~q~~~~-~~~--~~~-----~~~~~~~~~~lae~L~~~~p~~~~~v-~f~~SGseA~e~AiklAr 136 (460)
T PRK12403 66 TNLGYGRKDLAAAAARQMEQL-PYY--NMF-----FHTTHPAVIELSELLFSLLPGHYSHA-IYTNSGSEANEVLIRTVR 136 (460)
T ss_pred hcCCCCCHHHHHHHHHHHHhC-CCe--ecc-----cccCCHHHHHHHHHHHHhCCCCcCEE-EEeCCcHHHHHHHHHHHH
Confidence 357888877777666553221 111 111 01122345688999999987 4444 667899999999999999
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCCE-----------EEEEcCCCC------------CCCCHHHHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMK-----------IVSVGTDAK------------GNINIEELRKAAE 725 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~~-----------vv~V~~d~~------------g~iD~e~L~~~i~ 725 (1050)
.|....|..++.+|+ ...++||..-.+..+.|.+ +..++...- +..++++|++++.
T Consensus 137 ~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~ 216 (460)
T PRK12403 137 RYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKIL 216 (460)
T ss_pred HHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 886555543344444 3567899866554443322 334432110 0012466766664
Q ss_pred c-CCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc------c--CcEEEeCCc
Q 001579 726 A-NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G--ADVCHLNLH 792 (1050)
Q Consensus 726 ~-~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~------G--aDv~~~~~h 792 (1050)
+ +.+++++|+++.- +..|++.+ .+++|.++|++||+++|+|.+ ++|+.+.|.+ | +|++++ .
T Consensus 217 ~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV----~tGfGRtG~~~a~e~~gv~PDiv~~--g 290 (460)
T PRK12403 217 ELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEV----IGGFGRTGEWFAHEHFGFEPDTLSI--A 290 (460)
T ss_pred HhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc----ccCCCcCchhhhhhhcCCCCCeEEE--c
Confidence 3 3467888888653 45677653 299999999999999999987 4677777653 2 588875 5
Q ss_pred cccccCCCCCC-CcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHH
Q 001579 793 KTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 871 (1050)
Q Consensus 793 Ktf~~P~g~GG-Pg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~ 871 (1050)
|.++ +|- | +|.+++++++.+.+... + + . ....+++.|+++.++++.+.|..+-.+++.+
T Consensus 291 K~lg----gG~~P-iga~v~~~~i~~~~~~~--~---------~--~-~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~- 350 (460)
T PRK12403 291 KGLT----SGYVP-MGGLVLSKRIAEALVEQ--G---------G--V-FAHGLTYSGHPVAAAVAIANLKALRDEGVVT- 350 (460)
T ss_pred cccc----ccccc-eEEEEECHHHHHHHhcC--C---------C--c-cccCCCCCCCHHHHHHHHHHHHHHHhccHHH-
Confidence 8774 332 4 45555777766544210 0 0 0 0011224467788888899999887776543
Q ss_pred HHHHH-HHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccccccc-CC-CC----HHHHHHHHHHCCcccCCCCC
Q 001579 872 SKIAI-LNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNT-AG-IE----PEDVAKRLMDYGFHGPTMSW 939 (1050)
Q Consensus 872 a~~~~-~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~-~g-~~----~~~vakrL~d~Gi~~~~~~~ 939 (1050)
+.. .+.++|.++|++. ++++ ..|. |. +. -+.+..-+.. .. .. ...+.+.+.++|+.+...
T Consensus 351 --~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl-~~--gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-- 422 (460)
T PRK12403 351 --RVKDDTGPYLQRCLREVFGDHPLVGEVQGA-GL-VA--ALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST-- 422 (460)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCCEEeEeec-ce-EE--EEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec--
Confidence 332 5677888888653 3332 2221 22 21 2222110000 00 01 223456668899987522
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 940 PVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 940 pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
.+.++++|....|++|||+++++|.+++.++.
T Consensus 423 --~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 423 --LGRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 35799999999999999999999999998875
No 242
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.65 E-value=1.8e-15 Score=170.11 Aligned_cols=166 Identities=19% Similarity=0.192 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~ 712 (1050)
.+.++++.+++++|.+.+.+.++++++|..++++++. .++++|+++...|.++...+.+.|.+++.++.+.+
T Consensus 60 ~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~--------~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 60 PIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVC--------GPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcC--------CCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccC
Confidence 3779999999999998766667777777755554431 25689999999898777778889999999977533
Q ss_pred ------CCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccc--cccC--CCCcc
Q 001579 713 ------GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQ--VGLT--SPGYI 782 (1050)
Q Consensus 713 ------g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al--~gl~--~pg~~ 782 (1050)
+.+|+++++++++++ +++++|++++||++|.+. |+++|+++||++|++++||+|+...+ .+.. ....+
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p~~~G~~~-dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEH-PDAKAAVITNPTYYGICY-NLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhC-CCceEEEEECCCCCCEec-CHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 479999999999743 578999999999999998 89999999999999999999864221 1111 11246
Q ss_pred cCcEEEeCCccccccCCCCCCC-cceeeeeccc
Q 001579 783 GADVCHLNLHKTFCIPHGGGGP-GMGPIGVKKH 814 (1050)
Q Consensus 783 GaDv~~~~~hKtf~~P~g~GGP-g~G~i~v~~~ 814 (1050)
|+|+++.++||+++ || +.|++.+++.
T Consensus 210 ~~div~~S~hK~l~------g~~~~~~l~~~~~ 236 (294)
T cd00615 210 GADIVVQSTHKTLP------ALTQGSMIHVKGD 236 (294)
T ss_pred CCcEEEEchhcccc------hHhHHHHHHhCCC
Confidence 89999999999873 44 4566666654
No 243
>PRK07324 transaminase; Validated
Probab=99.65 E-value=3e-14 Score=165.54 Aligned_cols=292 Identities=15% Similarity=0.167 Sum_probs=176.0
Q ss_pred HHHHHHHHhhC-CCeeee-ccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC-
Q 001579 636 NLGEWLCTITG-FDSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1050)
Q Consensus 636 el~~~lael~G-~d~~~l-~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~- 712 (1050)
++++.++++++ .+..++ ..+++++|...+ ++.+. .++++|+++...|..+...++..|.+++.++++++
T Consensus 66 ~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~---~~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~ 137 (373)
T PRK07324 66 EFKEAVASLYQNVKPENILQTNGATGANFLV---LYALV-----EPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEEN 137 (373)
T ss_pred HHHHHHHHHhcCCChhhEEEcCChHHHHHHH---HHHhC-----CCCCEEEEcCCCchhHHHHHHHcCCEEEEEeccccc
Confidence 56677777664 554333 344444554333 33321 24578999888777776778899999999999764
Q ss_pred -CCCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccc-cCCCCc-ccCc
Q 001579 713 -GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG-LTSPGY-IGAD 785 (1050)
Q Consensus 713 -g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al~g-l~~pg~-~GaD 785 (1050)
..+|+++|+++++ +++++|++++|+ .+|.+- +.+++|+++|+++|+++++|.++.. ...+ .....+ ..-.
T Consensus 138 ~~~~d~~~l~~~~~---~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~ 214 (373)
T PRK07324 138 GWLPDLDELRRLVR---PNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKG 214 (373)
T ss_pred CCCCCHHHHHHhCC---CCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCE
Confidence 3589999999886 789999999994 789775 2399999999999999999987521 1111 101111 1223
Q ss_pred EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHCh
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1050)
Q Consensus 786 v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1050)
|++.+++|+|++| |.++|++++++.+...+... +....++.+...+. ++...+.. ..
T Consensus 215 I~~~s~SK~~~~~----G~RiG~i~~~~~li~~~~~~--------------~~~~~~~~~~~~q~----~a~~~l~~-~~ 271 (373)
T PRK07324 215 ISTNSMSKTYSLP----GIRVGWIAANEEVIDILRKY--------------RDYTMICAGVFDDM----LASLALEH-RD 271 (373)
T ss_pred EEEecchhhcCCc----cceeEEEecCHHHHHHHHHH--------------hCcEEecCChHHHH----HHHHHHcC-HH
Confidence 6677889988654 78899999877665543210 00111222112221 11122211 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCCccc-CCCCCCCCC
Q 001579 866 KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG-PTMSWPVPG 943 (1050)
Q Consensus 866 eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~Gi~~-~~~~~pv~~ 943 (1050)
+-+++..+...++.+.+.+.|++...+.+..+.+..+ +.+.++ .+.+..+++++|. ++|+.+ +...|..++
T Consensus 272 ~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~--~~i~~~-----~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~ 344 (373)
T PRK07324 272 AILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVST--SFVKLD-----VDMPSEDFCLKLLKETGVLLVPGNRFDLEG 344 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEE--EEEEeC-----CCCCHHHHHHHHHHhcCEEEECccccCCCC
Confidence 2233444444556777777777641221112222221 234443 1356788999975 779975 444465678
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 944 TLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 944 ~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
.+||++.. +++.+++.++.|++.++
T Consensus 345 ~iRis~~~--~~~~l~~~l~rl~~~l~ 369 (373)
T PRK07324 345 HVRIGYCC--DTETLKKGLKKLSEFLR 369 (373)
T ss_pred eEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 99999864 46667776766666554
No 244
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=5.8e-14 Score=166.32 Aligned_cols=334 Identities=21% Similarity=0.207 Sum_probs=207.1
Q ss_pred cccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHH
Q 001579 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair 669 (1050)
...+|++..++..++..+.... .+.. .++. ..+...++.+.|+++++.+ .-.++.+||+++++++++.+|
T Consensus 52 ~~~lGh~~p~v~~Ai~~ql~~~-~~~~-~~~~-------~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr 122 (443)
T PRK08360 52 VQNVGHNNPRVVKAIKEQTDKL-IHYT-PIYG-------FPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFAR 122 (443)
T ss_pred hcccCCCCHHHHHHHHHHHHhc-cCcc-cccc-------CcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHH
Confidence 3468999888877766653221 1111 0110 1123457888999998653 234678999999999999888
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCCCC------------CCHHHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGN------------INIEELRKAA 724 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~g~------------iD~e~L~~~i 724 (1050)
.|. +|++|+ ...++||....+....|. .+..++...... .+++.+++++
T Consensus 123 ~~t------gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (443)
T PRK08360 123 AYT------KRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKF 196 (443)
T ss_pred Hhc------CCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHH
Confidence 762 345555 466899987554333221 234444421100 2356677777
Q ss_pred Hc--CCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCc--------ccCcEEEeC
Q 001579 725 EA--NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLN 790 (1050)
Q Consensus 725 ~~--~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~--------~GaDv~~~~ 790 (1050)
++ +++++++|+++.- +..|++.+ .+++|.++|+++|+++++|.++. |+.+.|. .-.|++++
T Consensus 197 ~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~----g~gr~G~~~a~~~~~~~pDiitl- 271 (443)
T PRK08360 197 EGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS----GLGRTGKWFAIEHFGVEPDIITL- 271 (443)
T ss_pred HhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----CCCcCccchhhhhcCCCCCEEEe-
Confidence 64 3478999998732 45676642 49999999999999999998753 3433332 23688766
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|+++ +|..+|++++++++...+.... .... ..+++..++++.+.+..+..+++.
T Consensus 272 -sK~l~-----~G~pigav~~~~~i~~~~~~~~--------------~~~T----~~~~p~~~aaa~a~l~~l~~~~l~- 326 (443)
T PRK08360 272 -GKPLG-----GGLPISATIGRAEIMDSLPPLA--------------HAFT----LSGNPVASAAALAVIEEIEEKNLL- 326 (443)
T ss_pred -ccccc-----CCceeEEEEEcHHHHhhhcCCC--------------CCCC----CCcCHHHHHHHHHHHHHHHHcCHH-
Confidence 58774 4566888988887776553110 0011 223455566677888877665543
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccccc--cc-CCCCHHHHHHHHHHCCcccCCCCCCCC
Q 001579 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK--NT-AGIEPEDVAKRLMDYGFHGPTMSWPVP 942 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~--~~-~g~~~~~vakrL~d~Gi~~~~~~~pv~ 942 (1050)
++...+.++|.++|+++ ++++ ..| .|.. +-+++.+-. +. ....+..+.++|.++|+.+.... .
T Consensus 327 --~~~~~~g~~l~~~L~~l~~~~~~v~~vrg-~Gl~---~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~---~ 397 (443)
T PRK08360 327 --KRAEKLGNYTKKRLEEMKKKHELIGDVRG-IGLM---IGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFS---G 397 (443)
T ss_pred --HHHHHHHHHHHHHHHHHHHhCCCeeeeec-cceE---EEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecC---C
Confidence 44456778888888764 3332 112 1211 122221100 00 00123578888999999875332 4
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 001579 943 GTLMIEPTESESKEELDRYCDALISIREEIAQIENGKAD 981 (1050)
Q Consensus 943 ~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~~~~~~~~ 981 (1050)
+.+|+.|+..+|++|||+++++|.+++.++ +.|..|
T Consensus 398 ~~lr~~P~l~~t~~~id~~~~~l~~~l~~~---~~~~~~ 433 (443)
T PRK08360 398 NVLRIQPPLTIEKEVLDEGLDILEEAIEDV---EEGKVP 433 (443)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH---HhccCC
Confidence 789999999999999999999999988765 446653
No 245
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.65 E-value=4.4e-15 Score=171.44 Aligned_cols=298 Identities=9% Similarity=0.015 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHHHhhCCC---eeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc-CCCCCccH-HHHHhCCCEE
Q 001579 630 YQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP-VSAHGTNP-ATAAMCGMKI 704 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d---~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip-~saHgt~p-a~a~~~G~~v 704 (1050)
..+++.++++.+++++|.+ .+.+..++|+.|.++++..+- .+ ++++++. ....|... ..++..|..
T Consensus 46 f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~----~~----g~~~l~i~~G~fg~r~~~~a~~~g~~- 116 (360)
T PRK05355 46 FEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL----GG----GKKADYVDTGSWSKKAIKEAKKYGEV- 116 (360)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC----CC----CCeEEEEECCHHHHHHHHHHHHhCCc-
Confidence 3478889999999999973 245677888887777765432 22 2445433 22222111 226677865
Q ss_pred EEEcCCC-CCCCCHHHHHH-HHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCc
Q 001579 705 VSVGTDA-KGNINIEELRK-AAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1050)
Q Consensus 705 v~V~~d~-~g~iD~e~L~~-~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~ 781 (1050)
+.+..++ .|..+..++++ +++ +++++|.+++- +.+|+..++|++| +|++++||+++..+...+ ...+
T Consensus 117 ~~~~~~~~~g~~~~~~~~~~~l~---~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~i-dv~~ 186 (360)
T PRK05355 117 NVAASSEDDGFTYIPPLDEWQLS---DDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPI-DVSK 186 (360)
T ss_pred eEEecccccCCCCCCChhhccCC---CCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccC-CHHH
Confidence 6666654 57777666666 665 56788888775 5689996457766 899999999864332211 1223
Q ss_pred ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCC---CCCCCCCCCCCCCcchhhhHHHHHHHHH
Q 001579 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSALILPISYT 858 (1050)
Q Consensus 782 ~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~---~~~~~~~~t~~i~sa~~g~~~~~~~a~a 858 (1050)
.|+++++.||+|+ | ||+|++++++++.+.+... .+...+. ........|+++. .+.+..+
T Consensus 187 --~d~~~~ssqK~lg-P-----~Glg~l~~s~~~l~~~~~~-~~~~~~~~~~~~~~~~~~Tp~~~--------~i~aL~~ 249 (360)
T PRK05355 187 --FGLIYAGAQKNIG-P-----AGLTIVIVREDLLGRALPS-IPSMLDYKTHADNDSMYNTPPTF--------AIYLAGL 249 (360)
T ss_pred --ccEEEEecccccc-C-----CceEEEEECHHHHhhcccC-CChHHHHHHHHhcCCccCCCcHH--------HHHHHHH
Confidence 4699999999874 3 6899999999877665432 1111000 0000001222222 1222345
Q ss_pred HHHHHChh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 001579 859 YIAMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1050)
Q Consensus 859 ~l~~lG~e-Gl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~ 935 (1050)
.+.++-++ |+.++.++...+++++.+.|+++ +..+ ..+..+....+.|.++ .+....++.+.+.++|++..
T Consensus 250 aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~-~~~~~rs~~v~sf~~~-----~~~~~~~~~~~~~~~Gi~~~ 323 (360)
T PRK05355 250 VFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNP-VAPEDRSRMNVPFTLA-----DEELDKKFLAEAKAAGLVGL 323 (360)
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccC-CChhhcCCcEEEEEcC-----ChHHHHHHHHHHHHCCCccc
Confidence 56666677 79999999999999999999985 2221 1111111111334433 12233566678888999974
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 936 TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 936 ~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
.... ..+++|+++..++|++|||+|+++|++++.
T Consensus 324 ~~~~-~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 324 KGHR-SVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred CCCC-ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 3221 248899999999999999999999999765
No 246
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.65 E-value=3.7e-14 Score=166.66 Aligned_cols=295 Identities=20% Similarity=0.256 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCccHHHHHhCC------
Q 001579 631 QEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCG------ 701 (1050)
Q Consensus 631 ~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vli-p~saHgt~pa~a~~~G------ 701 (1050)
.+...++++.+++++| .+.+ +..++|+++.++++.+++.| .++++|++ ..++||.........+
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~~v-~~~~sgsea~~~al~~~~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 150 (413)
T cd00610 78 NEPAVELAELLLALTPEGLDKV-FFVNSGTEAVEAALKLARAY------TGRKKIISFEGAYHGRTLGALSLTGSKKYRG 150 (413)
T ss_pred CHHHHHHHHHHHHhCCCCCCEE-EEcCcHHHHHHHHHHHHHHH------cCCCeEEEECCCcCCccHHHHHhcCCccccc
Confidence 4567789999999998 4444 56788998887777766654 13456665 4578987766544332
Q ss_pred ------CEEEEEcCCCC------CCCCHHHHHHHHHcCCCCEEEEEEEcCC-Ccccccc---CHHHHHHHHHHcCCEEEE
Q 001579 702 ------MKIVSVGTDAK------GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEE---GIDEICKIIHDNGGQVYM 765 (1050)
Q Consensus 702 ------~~vv~V~~d~~------g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~---di~eI~~la~~~G~~v~v 765 (1050)
.+++.++.+.. ...|+++|+++++++++++++|+++..+ ..|.+.+ .+++|.++|+++|+++++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 230 (413)
T cd00610 151 GFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIA 230 (413)
T ss_pred cCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 24667776532 2348999999998655577777776543 4587641 299999999999999999
Q ss_pred eccccccccccCCCCc------c--cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCC
Q 001579 766 DGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQ 837 (1050)
Q Consensus 766 D~A~~~al~gl~~pg~------~--GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~ 837 (1050)
|+++. ++.+.|. + .+|+.++ .|+|+ +|.++|++++++++...++.... .
T Consensus 231 Dev~~----g~g~~g~~~~~~~~~~~~d~~t~--sK~l~-----~g~~~g~~~~~~~~~~~~~~~~~------------~ 287 (413)
T cd00610 231 DEVQT----GFGRTGKMFAFEHFGVEPDIVTL--GKGLG-----GGLPLGAVLGREEIMDAFPAGPG------------L 287 (413)
T ss_pred ecccc----CCCcCcchhhHhhcCCCCCeEEE--ccccc-----CccccEEEEEcHHHHHhhccCCC------------C
Confidence 98753 2322221 2 3577655 58885 34668888888877766511100 0
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc---CCeeecC-CCCccceeEEEeccccc
Q 001579 838 PLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRG-VNGTVAHEFIVDLRGLK 913 (1050)
Q Consensus 838 ~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~v~~~g-~~g~~~~e~i~~~~~~~ 913 (1050)
..+..+ +++..++++.+.+..+..+. ..++...+.+++.++|++. +++.... ..+.. +.+.+.+-.
T Consensus 288 ~~~t~~----~~~~~~~a~~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~---~~~~~~~~~ 357 (413)
T cd00610 288 HGGTFG----GNPLACAAALAVLEVLEEEG---LLENAAELGEYLRERLRELAEKHPLVGDVRGRGLM---IGIELVKDR 357 (413)
T ss_pred CCCCCC----cCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceE---EEEEEecCC
Confidence 001112 23334445666676665433 3345557788888888765 1322110 11222 233332100
Q ss_pred c---cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 914 N---TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 914 ~---~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
. ........+.+.|.++|+.+.... .+.+|++++..+|++|||+++++|.++
T Consensus 358 ~~~~~~~~~~~~~~~~l~~~gv~v~~~~---~~~lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 358 ATKPPDKELAAKIIKAALERGLLLRPSG---GNVIRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred CcCCcchHHHHHHHHHHHHCCeEEeecC---CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 0 001245689999999999875332 478999999999999999999999865
No 247
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=6.2e-14 Score=165.27 Aligned_cols=330 Identities=16% Similarity=0.191 Sum_probs=203.4
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC--eeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d--~~~l~~~sGa~ge~a~Llair 669 (1050)
+.+|++.+.+..++..+.-.. .+.....+. .+...++.+.|+++++-+ .-.++.+||++++++++..+|
T Consensus 52 ~~lGh~~p~v~~ai~~ql~~l-~~~~~~~~~--------~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr 122 (425)
T PRK07495 52 VNTGHRHPRVIAAVKAQLDRF-THTCHQVVP--------YENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIAR 122 (425)
T ss_pred hccCCCCHHHHHHHHHHHhhc-cCcccCccC--------CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHH
Confidence 467888887777766653211 111100111 123457888899988532 234778999999999999888
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC--------C-----EEEEEcCCCC--CC---CCHHHHHHHHHc--CC
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M-----KIVSVGTDAK--GN---INIEELRKAAEA--NR 728 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G--------~-----~vv~V~~d~~--g~---iD~e~L~~~i~~--~~ 728 (1050)
.| .| |.+|+ ...++||....+....| + .++.+|++.+ |. -+++++++.+++ ++
T Consensus 123 ~~---tg---r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~ 196 (425)
T PRK07495 123 AA---TG---RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDP 196 (425)
T ss_pred Hh---hC---CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCC
Confidence 76 22 44555 57789998755433211 1 2445555322 21 125566777753 34
Q ss_pred CCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCccccc
Q 001579 729 DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTFC 796 (1050)
Q Consensus 729 ~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~hKtf~ 796 (1050)
+++++|+++.. ...|++. +.+++|.++|++||+++++|.++ .|+.+.|.+ -+|++++ .|.++
T Consensus 197 ~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~----tG~gr~G~~~a~~~~gv~pDi~tl--sK~l~ 270 (425)
T PRK07495 197 QRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQ----TGFARTGKLFAMEHHEVAADLTTM--AKGLA 270 (425)
T ss_pred CceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh----hcCCcCCCceeecccCCCCCEEee--hhhhc
Confidence 67888887743 2456553 25999999999999999999874 345444432 3577666 58774
Q ss_pred cCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHH
Q 001579 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1050)
Q Consensus 797 ~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1050)
||-.+|.+++++++.+.+.... ..+++.|+++.++++.+.+..+..+++.+ +..
T Consensus 271 -----~G~pigav~~~~~i~~~~~~~~------------------~~~T~~~~pl~~aaa~a~l~~l~~~~l~~---~~~ 324 (425)
T PRK07495 271 -----GGFPLAAVTGRAEIMDAPGPGG------------------LGGTYGGNPLGIAAAHAVLDVIEEEDLCE---RAN 324 (425)
T ss_pred -----CCccceEEEEcHHHHhccCCCC------------------cCCCCCCCHHHHHHHHHHHHHHHhchHHH---HHH
Confidence 3445788888887766542110 00112345666667777888886655544 444
Q ss_pred HHHHHHHHHHhcc---CCee--ecCCCCccceeEEEecccccc-cCC-CCHHHHHHHHHHCCcccCCCCCCCCCEEEEEc
Q 001579 877 LNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN-TAG-IEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 949 (1050)
Q Consensus 877 ~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~-~~g-~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~ 949 (1050)
.+.++|.++|+++ ++.+ ..|. |.. +.+.+.+-+. ... .....+.+.+.++|+.+.+.. +..+.+|+.|
T Consensus 325 ~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~---~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g-~~~~~~r~~P 399 (425)
T PRK07495 325 QLGNRLKQRLASLRETVPEIADIRGP-GFM---NAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCG-VHGNVIRFLA 399 (425)
T ss_pred HHHHHHHHHHHHHHhhCCCeeeeecC-ceE---EEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecC-CCCCEEEEeC
Confidence 6778888888764 3322 1232 221 2233321000 000 013467888889999875432 1247899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 950 TESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 950 te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
+...|++|+|+++++|.+++.++.
T Consensus 400 pl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 400 PITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998765
No 248
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.65 E-value=1.7e-14 Score=168.49 Aligned_cols=214 Identities=23% Similarity=0.255 Sum_probs=156.2
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchh---
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD--- 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~--- 290 (1050)
.++++.+|+++|.+. +.++.+|++++.+++.++ .. +||+|+++...|+.+...++..+...|++++++|.++
T Consensus 62 ~~le~~lA~l~g~~~--av~~~sG~~Ai~~~l~al-~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~ 136 (391)
T TIGR01328 62 SNLEGRIAFLEGTEA--AVATSSGMGAIAATLLTI-LK--AGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEE 136 (391)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 457789999999886 678889998777666554 23 7899999999999888887776778899999998754
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|+++.|. |.|++| |+
T Consensus 137 l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD-~a~a~~~~~~~~~~g~Divv~S~sK~lgg~---g~ 212 (391)
T TIGR01328 137 VKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVD-NTFATPMLTNPVALGVDVVVHSATKYIGGH---GD 212 (391)
T ss_pred HHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCchhccCCchhcCCCEEEccccccccCC---CC
Confidence 444 6788999999998 78999999999999999999999994 45566666667788999999998 877643 33
Q ss_pred cceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHH
Q 001579 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1050)
Q Consensus 368 P~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia 447 (1050)
+.+|+++.++++.+++- ..+ ++.... + ..++. .|+ +...+-+-+..+.
T Consensus 213 ~~gG~v~~~~~li~~l~--~~~----------------------~~~~~g-~--~l~~~---~a~--l~l~~L~tl~~r~ 260 (391)
T TIGR01328 213 VVAGLICGKAELLQQIR--MVG----------------------IKDMTG-S--VISPF---DAW--LILRGLKTLNIRM 260 (391)
T ss_pred ceEEEEEcCHHHHHHHH--HHH----------------------HHhCCC-C--CCCcH---HHH--HHHhCcCcHHHHH
Confidence 44688888887765441 000 001000 0 00111 121 2334445566677
Q ss_pred HHHHHHHHHHHHHHhcCCCEE
Q 001579 448 QRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 448 ~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
++..+++.++++.|++.++++
T Consensus 261 ~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 261 KRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 888899999999999885454
No 249
>PRK06062 hypothetical protein; Provisional
Probab=99.65 E-value=5.3e-14 Score=167.02 Aligned_cols=330 Identities=14% Similarity=0.155 Sum_probs=205.0
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llair 669 (1050)
..+|+|.+++..++..+. ....+.. +.+. .+...++.+.|++++. ++.+ ++.+||+++++++++.+|
T Consensus 65 ~~lGh~~p~v~~Ai~~q~-~~~~~~~-~~~~--------~~~~~~lae~L~~~~p~~~~~v-~f~~SGsEAve~AlklAr 133 (451)
T PRK06062 65 TNIGHQHPKVVAAIQEQA-ARLCTVA-PAHA--------NDARSEAARLIAERAPGDLSKV-FFTNGGADANEHAVRMAR 133 (451)
T ss_pred hcCCCCCHHHHHHHHHHH-HhcCCcC-CccC--------CHHHHHHHHHHHHhCCCCCCEE-EEcCChHHHHHHHHHHHH
Confidence 467999888877766653 2211111 1111 1234578888999875 3443 668999999999999888
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC-----------EEEEEcCCCCCC------CC-------HHHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-----------KIVSVGTDAKGN------IN-------IEELRKAA 724 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~-----------~vv~V~~d~~g~------iD-------~e~L~~~i 724 (1050)
.| . +|++|| ...++||....+....|- .+..++.....+ .| +++|++++
T Consensus 134 ~~---t---gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l 207 (451)
T PRK06062 134 LH---T---GRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVI 207 (451)
T ss_pred Hh---h---CCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHH
Confidence 76 2 244555 567899987666443221 122332211111 12 78889988
Q ss_pred HcC-CCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCC
Q 001579 725 EAN-RDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNL 791 (1050)
Q Consensus 725 ~~~-~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~ 791 (1050)
+++ .+++++|+++.- +..|++.+ .+++|.++|+++|+++|+|.+ +.||.+.|.+ -+|++++
T Consensus 208 ~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV----~tGfGRtG~~~a~~~~gv~PDi~t~-- 281 (451)
T PRK06062 208 ELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEV----MAGFGRTGKWFAIEHFGVVPDLITF-- 281 (451)
T ss_pred HhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecc----ccCCCcCcHHHHHHhcCCCCCeeee--
Confidence 754 367888888753 45577751 399999999999999999986 5567676643 3688876
Q ss_pred ccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHH
Q 001579 792 HKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEA 871 (1050)
Q Consensus 792 hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~ 871 (1050)
.|.++ +|--.+|.+++++++.+.+....+ ..+ +++.|+++.++++.+.|..+-.+++.+.
T Consensus 282 gK~lg----gG~~Pigav~~~~~i~~~~~~~~~-------------~~~---~T~~gnpl~~Aaa~a~L~~l~~~~l~~~ 341 (451)
T PRK06062 282 AKGVN----SGYVPLGGVAISEAIAATFADRPY-------------PGG---LTYSGHPLACAAAVATINAMEEEGIVEN 341 (451)
T ss_pred chhhh----cCCcCcEEEEEcHHHHHHhccCCC-------------CCC---CCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 58774 332235666677776665421100 001 1234567778888899988877665543
Q ss_pred HHHHHHHH-HHHHHHHhcc---CCee--ecCCCCccceeEEEecccccccCCC--------CHHHHHHHHHHCCcccCCC
Q 001579 872 SKIAILNA-NYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGI--------EPEDVAKRLMDYGFHGPTM 937 (1050)
Q Consensus 872 a~~~~~~a-~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~--------~~~~vakrL~d~Gi~~~~~ 937 (1050)
+ .... .+|.++|+++ ++++ ..|. |. +..+-+...+-.+ ... ....+.+.|.++|+.+..
T Consensus 342 ~---~~~G~~~l~~~L~~l~~~~~~v~~vrG~-Gl-~~gve~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~- 414 (451)
T PRK06062 342 A---ARIGAEVLGPGLRELAERHPSVGEVRGL-GV-FWALELVADRETR-EPLAPYGASSAAMAAVKAACKERGLLPFV- 414 (451)
T ss_pred H---HHHHHHHHHHHHHHHHhcCCcEEeEecc-cc-EEEEEEccccccc-CCCcccchhhHHHHHHHHHHHHCCcEEee-
Confidence 3 3454 4777777764 3332 2232 32 2112221110000 000 134788889999998642
Q ss_pred CCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 938 SWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 938 ~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
..+.+|++|+..+|++|||++++++.+++.+++.
T Consensus 415 ---~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 415 ---NGNRIHVVPPCTVTEDEVREGLAILDAALAVADA 448 (451)
T ss_pred ---cCCEEEEECCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 2478999999999999999999999999987654
No 250
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.65 E-value=1.7e-14 Score=165.36 Aligned_cols=290 Identities=17% Similarity=0.226 Sum_probs=193.3
Q ss_pred cccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEE
Q 001579 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~ 706 (1050)
.-|..+...+|++.|++++|.+.+ +..+||-.++.+.+-++. +++|.|+...-.|-+--..++..+.+++.
T Consensus 79 i~G~~~~h~~LE~~lA~f~g~e~a-l~f~SGy~AN~~~i~~l~--------~~~dli~~D~lnHASiidG~rls~a~~~~ 149 (388)
T COG0156 79 ISGTSDLHVELEEELADFLGAEAA-LLFSSGFVANLGLLSALL--------KKGDLIFSDELNHASIIDGIRLSRAEVRR 149 (388)
T ss_pred ccCCcHHHHHHHHHHHHHhCCCcE-EEEcccchhHHHHHHHhc--------CCCcEEEEechhhhhHHHHHHhCCCcEEE
Confidence 357788899999999999999976 455788877866555443 24677777777776666667889999988
Q ss_pred EcCCCCCCCCHHHHHHHHHcCCC---CEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCC--
Q 001579 707 VGTDAKGNINIEELRKAAEANRD---NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG-- 780 (1050)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~~~---~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg-- 780 (1050)
.+. .|+++|+++++++.. +-+.|++..- |..|.+- |+++|++++++||++++||.||..+..| .-|
T Consensus 150 f~H-----nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiA-pL~~l~~L~~ky~a~L~VDEAHa~Gv~G--~~GrG 221 (388)
T COG0156 150 FKH-----NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIA-PLPELVELAEKYGALLYVDEAHAVGVLG--PNGRG 221 (388)
T ss_pred ecC-----CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcC-CHHHHHHHHHHhCcEEEEEccccccccC--CCCcc
Confidence 876 699999999986321 2344444433 6788887 7999999999999999999998644433 222
Q ss_pred ---ccc-----CcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 781 ---YIG-----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 781 ---~~G-----aDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
.+| .||+++++.|.|+. . .|++.+++.+.+++-.+. +..-.+ .+- .+..
T Consensus 222 ~~e~~g~~~~~vdi~~gTlsKAlGs---~----Gg~v~g~~~~~d~L~~~a-----------r~~ifS-tal----pP~~ 278 (388)
T COG0156 222 LAEHFGLEPEEVDIIVGTLGKALGS---S----GGYIAGSAALIDYLRNRA-----------RPFIFS-TAL----PPAV 278 (388)
T ss_pred HHHHhCCCCccceEEEEEchhhhcc---c----CceeeCcHHHHHHHHHhC-----------Cceecc-CCC----CHHH
Confidence 122 37999999999862 2 368888877766653210 000000 011 1223
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCC
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~G 931 (1050)
++++...++.+-.. .+..++...++.++++.++.. +.+. ....+.. .+++.- ......++.+|.+.|
T Consensus 279 aaa~~~al~~l~~~--~~~r~~L~~~~~~~~~~~~~~~~~~~--~s~s~I~-pv~~gd-------~~~a~~~s~~l~~~G 346 (388)
T COG0156 279 AAAALAALRILEEG--PERRERLQELAAFFRSLLKALGLVLL--PSESPII-PVILGD-------EERALEASRALLEEG 346 (388)
T ss_pred HHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHhcCCccC--CCCCCee-eeEeCC-------HHHHHHHHHHHHHCC
Confidence 34455556665432 233345556777887656543 4331 1111221 122221 123678899999999
Q ss_pred cccCCCCCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 932 FHGPTMSWP-VP---GTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 932 i~~~~~~~p-v~---~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
|.+..+.+| |+ ..||+++|..+|++|||+++++|.++
T Consensus 347 i~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 347 IYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred eeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 998877777 43 57999999999999999999999865
No 251
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.65 E-value=1.6e-14 Score=169.17 Aligned_cols=275 Identities=13% Similarity=0.092 Sum_probs=175.8
Q ss_pred HHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhh--------------------------cC--CCCEEEEcCCCC--
Q 001579 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ--------------------------KG--KKKTFIIASNCH-- 265 (1050)
Q Consensus 216 ~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~--------------------------~~--~gd~Vlvs~~~H-- 265 (1050)
..+...+|+|++.+|+-.++|.. |..++.+|+.-. ++ +||+|+.-+..|
T Consensus 100 ~~~ra~~lf~a~~anvqp~Sg~~-An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GG 178 (493)
T PRK13580 100 AAEHAKELFGAEHAYVQPHSGAD-ANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGG 178 (493)
T ss_pred HHHHHHHHhCCCcccccCCCcHH-HHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCC
Confidence 44678899999998887776554 455555554310 00 168888654333
Q ss_pred ------hhHHHHHHHhccCCCeEEE--EcCchhhhc-cCCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCc
Q 001579 266 ------PQTIDICITRADGFDIKVV--VSDLKDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLL 336 (1050)
Q Consensus 266 ------ps~~~~~~~~a~~~gi~v~--~~~~~~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~ 336 (1050)
+.+.......+..+|++-. .+|++++++ +.+.++.|++...+.+|.+.|+++|.++||++|++++|+ +.+
T Consensus 179 Hlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD-~AH 257 (493)
T PRK13580 179 HLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVD-MAH 257 (493)
T ss_pred eeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEE-Cch
Confidence 3333332222334455422 245677777 677788888876543366889999999999999999993 355
Q ss_pred cccCCCC---C----CcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEeccccc
Q 001579 337 ALTILKP---P----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE 408 (1050)
Q Consensus 337 alg~l~~---p----g~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtre 408 (1050)
++|++.- + ...++||+++|+ |+|++ |..||+++++++.+++. + ..+ | +
T Consensus 258 ~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~G------P~GG~I~~~~~l~~~L~-~---------a~P-~---i---- 313 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRG------PRGGLVLAKKEYADAVD-K---------GCP-L---V---- 313 (493)
T ss_pred hhceeccccchhhcCCCCCCcEEEeCChhhccC------CCeEEEEecHHHHHHHh-h---------CCC-c---c----
Confidence 6665531 1 123799999998 77743 55689999988877651 0 000 0 0
Q ss_pred ccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCccEEEEecCC---
Q 001579 409 QHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCAD--- 484 (1050)
Q Consensus 409 q~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~~~~~~v~i~~~~--- 484 (1050)
.+++.. ....|...++ ..+...+.++.++++.+++++|++.|.+.| ++++. ....+.+.|.+.+
T Consensus 314 ------~gg~l~---p~iAA~avAl--~e~~~~ef~~y~~~l~~Na~~La~~L~~~G-~~vv~ggTdshIV~V~lg~~~~ 381 (493)
T PRK13580 314 ------LGGPLP---HVMAAKAVAL--AEARTPEFQKYAQQVVDNARALAEGFLKRG-ARLVTGGTDNHLVLIDVTSFGL 381 (493)
T ss_pred ------cCCCcc---HHHHHHHHHH--HHHhCccHHHHHHHHHHHHHHHHHHHHhcC-CCccCCCCCCCEEEEEeCCHHH
Confidence 011111 1222222221 222223457789999999999999999998 98863 2223456666654
Q ss_pred H-HHHHHHHHHcCceeeee----c------CCeEEEEeccCC----CHHHHHHHHHHHh
Q 001579 485 A-HAIASAAYKIEMNLRVV----D------SNTVTASFDETT----TLEDVDKLFIVFA 528 (1050)
Q Consensus 485 ~-~~i~~~L~~~GI~~~~~----~------~~~lris~~e~~----t~edId~lv~~l~ 528 (1050)
+ ..+.+.|.+.||.+... + ...||+++++.+ +++||+++++.|.
T Consensus 382 ~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~ 440 (493)
T PRK13580 382 TGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIV 440 (493)
T ss_pred HHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHH
Confidence 3 46777999999987532 1 467999999954 6999999999996
No 252
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.65 E-value=4.4e-14 Score=165.98 Aligned_cols=303 Identities=14% Similarity=0.156 Sum_probs=191.0
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--e-eeeccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--S-FSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~-~~l~~~sGa~-ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
+|..++.+.+.+++++..|.+ . ..+..++|++ +.+ ++++.+. .++|+|+++...+..+...++..|.+
T Consensus 78 ~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~---~~~~~l~-----~~Gd~Vlv~~P~y~~~~~~~~~~g~~ 149 (405)
T PRK06207 78 RGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF---LAVAATV-----ARGDKVAIVQPDYFANRKLVEFFEGE 149 (405)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH---HHHHHhc-----CCCCEEEEeCCCchhHHHHHHHcCCE
Confidence 577788888888999888853 2 3444445543 432 3333321 24688999988777666778899999
Q ss_pred EEEEcCCC-----CCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-cc
Q 001579 704 IVSVGTDA-----KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QV 774 (1050)
Q Consensus 704 vv~V~~d~-----~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~ 774 (1050)
++.|+++. +..+|+++|+++++ +++++|++++| |.+|.+- +++++|+++|+++|+++++|.++..- ..
T Consensus 150 v~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~ 226 (405)
T PRK06207 150 MVPVQLDYLSADKRAGLDLDQLEEAFK---AGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYD 226 (405)
T ss_pred EEEEeccccCcccCCCcCHHHHHHhhh---hcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC
Confidence 99998862 46799999999997 67889999999 5789875 35899999999999999999986421 11
Q ss_pred c--cCCCCcccC--c--EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhh
Q 001579 775 G--LTSPGYIGA--D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWG 848 (1050)
Q Consensus 775 g--l~~pg~~Ga--D--v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g 848 (1050)
+ ......+.. | +++.++.|+|++| |.++|++++++++...+... .....++.+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~vi~i~SfSK~~~lp----GlRiG~ii~~~~l~~~~~~~--------------~~~~~~~~~~~~ 288 (405)
T PRK06207 227 GTSYTHLRALPIDPENVITIMGPSKTESLS----GYRLGVAFGSPAIIDRMEKL--------------QAIVSLRAAGYS 288 (405)
T ss_pred CCCCCchhcCCCCcCcEEEEecchhhccCc----ccceEEEEcCHHHHHHHHHH--------------HhHhccCCCHHH
Confidence 1 111111222 2 6677889999765 67899999887665543210 000111211122
Q ss_pred hHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH
Q 001579 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1050)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~ 928 (1050)
+. ++..++. -+..-+.+..+....+.+++.+.|+++..+.+..+.+..+ +.+++++ .+++..+++++|.
T Consensus 289 q~----a~~~~l~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f--l~~~l~~----~~~~~~~~~~~l~ 357 (405)
T PRK06207 289 QA----VLRTWFS-EPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSY--LFPRLPR----LAVSLHDFVKILR 357 (405)
T ss_pred HH----HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEE--EEEeCcc----cCCCHHHHHHHHH
Confidence 22 1222222 1212245555555667788888887642222211222221 4556542 1246788999997
Q ss_pred -HCCcccC-CCCC--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 929 -DYGFHGP-TMSW--PVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 929 -d~Gi~~~-~~~~--pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
++|+.+. ...| +..+.+||++.. +.++++.-++.|.+++++.
T Consensus 358 ~~~gV~v~pG~~F~~~~~~~~Ris~~~--~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 358 LQAGVIVTPGTEFSPHTADSIRLNFSQ--DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred HhcCEEEeCchHhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHh
Confidence 6899863 3334 235789999985 5788888777777776554
No 253
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.65 E-value=3.7e-14 Score=162.80 Aligned_cols=298 Identities=16% Similarity=0.139 Sum_probs=196.8
Q ss_pred CCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhh
Q 001579 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1050)
Q Consensus 172 G~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~ 251 (1050)
+.|.++...|+.+.+.+.+.....+.|.+- ++ .++++.+|+++|+++.++.++.|+|.++..+++++.
T Consensus 25 ~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~-----~~-----~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~-- 92 (346)
T TIGR01141 25 NSNENPFGPPPKAKEALRAEADKLHRYPDP-----DP-----AELKQALADYYGVDPEQILLGNGSDEIIELLIRAFL-- 92 (346)
T ss_pred cCCCCCCCCCHHHHHHHHHhHHHhhcCCCC-----CH-----HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhc--
Confidence 556667777777665665432223334321 12 368899999999988899999999887766665542
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHH
Q 001579 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKN 321 (1050)
Q Consensus 252 ~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ 321 (1050)
++|++|++++..|+.....+ +..|++++.++. +++++ +++++++|++++| |.+|.+.|++++.++
T Consensus 93 -~~gd~v~~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l 167 (346)
T TIGR01141 93 -EPGDAVLVPPPTYSMYEISA----KIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAV 167 (346)
T ss_pred -CCCCEEEEcCCCHHHHHHHH----HHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHH
Confidence 27899999998887655543 346888877754 33444 5678999999988 789999999999999
Q ss_pred HHhC--CcEEEEEecCcc-ccCCCCC----CcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeec
Q 001579 322 AHAN--GVKVVMATDLLA-LTILKPP----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSID 393 (1050)
Q Consensus 322 ah~~--galliV~a~~~a-lg~l~~p----g~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d 393 (1050)
++.+ |++++++. ..+ +.....+ ...+-+|+++|. |.||.| |..+|++++++++.+++...
T Consensus 168 ~~~~~~~~~ii~D~-~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~----G~r~G~~~~~~~~~~~~~~~------- 235 (346)
T TIGR01141 168 LERTPEDALVVVDE-AYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLA----GLRIGYAIANAEIIDALNKV------- 235 (346)
T ss_pred HHhCCCCcEEEEEC-chhhhcCCccHHHHHhhCCCEEEEehhhHhhhch----hhhceeeecCHHHHHHHHhc-------
Confidence 9887 99998843 222 1111011 112335677785 887543 45689999988877665210
Q ss_pred CCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC
Q 001579 394 SSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP 473 (1050)
Q Consensus 394 ~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~ 473 (1050)
+.+.+.+ .....+. .. ++. ....++++.++..++.+++++.|+++.++++....
T Consensus 236 ---------------------~~~~~~~-~~~~~~~-~~-~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~ 289 (346)
T TIGR01141 236 ---------------------RAPFNLS-RLAQAAA-IA-ALR--DDDFIEKTVEEINAERERLYDGLKKLPGLEVYPSD 289 (346)
T ss_pred ---------------------cCCCCCC-HHHHHHH-HH-HhC--CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEECCCc
Confidence 0011111 1111111 11 111 11247788888999999999999988338865421
Q ss_pred CccEEEEecCC-HHHHHHHHHHcCceeeeec-----CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 474 FFDTVKVKCAD-AHAIASAAYKIEMNLRVVD-----SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 474 ~~~~v~i~~~~-~~~i~~~L~~~GI~~~~~~-----~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
..-+.+.++. +.++.++|.++||.+.... ++.+|+|++ |++|+++++++|.
T Consensus 290 -g~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 290 -ANFVLIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred -CCEEEEecCCCHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 1234555553 7889999999999886532 578999976 8999999999873
No 254
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.65 E-value=3.8e-14 Score=163.22 Aligned_cols=297 Identities=17% Similarity=0.209 Sum_probs=184.4
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++.+..|.+ .. .+..++|++. +..++++.+. ..|+ ++++|+++...+..+...+.+.|+++
T Consensus 36 ~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~--ai~~~~~~~~-~~g~-~~d~Vl~~~p~y~~~~~~~~~~g~~~ 111 (350)
T TIGR03537 36 LGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKE--AIFHFPLVFI-DPEE-DRRRVIFGTPGYPVYERGALFAGGEP 111 (350)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH--HHHHHHHHHc-CCCC-CCceEEEcCCCCcchHHHHHhcCCEE
Confidence 576677777777777766743 33 4556666552 2333333321 2221 34689999887777777788999999
Q ss_pred EEEcCCC-CC-CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccccccCCC
Q 001579 705 VSVGTDA-KG-NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1050)
Q Consensus 705 v~V~~d~-~g-~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p 779 (1050)
+.+++++ +| .+|+++++++++ ++++++++++| |.+|.+. +.+++|+++|+++|+.+++|.++.....+ ..+
T Consensus 112 ~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~ 187 (350)
T TIGR03537 112 TAVKLKKEDGFLLRLEKVEKSIL---EETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG-EPP 187 (350)
T ss_pred EEcccCcccCCccCHHHHHHhhh---hccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC-CCC
Confidence 9999974 33 589999999987 67899999999 5799775 23999999999999999999986321111 111
Q ss_pred ---CcccCc--EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHH
Q 001579 780 ---GYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1050)
Q Consensus 780 ---g~~GaD--v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1050)
..++.| +++.+++|+|+.| |.++|+++.++++...+... +....++++...+..
T Consensus 188 ~~~~~~~~~~~i~~~s~SK~~g~~----GlRiG~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~q~~--- 246 (350)
T TIGR03537 188 HSALEVGIENVLAFHSLSKRSGMT----GYRSGFVAGDEKLISFLRKL--------------RANFGVASPDFVQAA--- 246 (350)
T ss_pred CchhhcCcCCEEEEeecccccCCc----cccceeeecCHHHHHHHHHH--------------HHhhccCCCHHHHHH---
Confidence 112333 6667889988543 67799998876655443210 000112221111211
Q ss_pred HHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 001579 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (1050)
Q Consensus 855 ~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~ 933 (1050)
+.+.+ ...+.+++..+....+.+.+.+.|++. +++. .+.+.++ +.++++. +.+..+++++|.++|+.
T Consensus 247 -~~~~l--~~~~~~~~~r~~l~~~~~~~~~~l~~~g~~~~--~~~g~~~--~~~~~~~-----~~~~~~l~~~L~~~gv~ 314 (350)
T TIGR03537 247 -AKAAW--SDDNHVLERRKIFKRKRDLFIEFFNKVGLEYL--YPDATFY--LWVKVPS-----GIDAKDYALRLLENGIV 314 (350)
T ss_pred -HHHHh--CCcHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCeEEE--EEEECCC-----CCCHHHHHHHHHHCCEE
Confidence 11111 123334555555566777888888764 3322 1222221 3356542 35678999999999998
Q ss_pred cCC-CCCCC--CCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001579 934 GPT-MSWPV--PGTLMIEPTESESKEELDRYCDALIS 967 (1050)
Q Consensus 934 ~~~-~~~pv--~~~lrI~~te~~t~eeid~fv~aL~~ 967 (1050)
+.. ..|.. .+++||++. .+.+++++.++.|++
T Consensus 315 v~~g~~f~~~~~~~~Ri~~~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 315 VAPGENFGSGEEGYVRVALV--PTLEECEEALRLWER 349 (350)
T ss_pred EcCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHhc
Confidence 743 33432 478999874 457777777766653
No 255
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.64 E-value=5.6e-14 Score=164.35 Aligned_cols=305 Identities=16% Similarity=0.177 Sum_probs=184.7
Q ss_pred ccHHHHHHHHHHHHHHhhCCC---eee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD---SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d---~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
+|..++.+.+.+++....|.. ... +..+++++|.... ++... .++++|++++..++.+...+++.|.+
T Consensus 67 ~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~---~~~~~-----~~gd~vl~~~p~y~~~~~~~~~~g~~ 138 (391)
T PRK07309 67 AGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSAS---LTAIL-----EPGDKVLLPAPAYPGYEPIVNLVGAE 138 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH---HHHhc-----CCCCEEEEeCCCCcchHHHHHHcCCE
Confidence 466566666666666555652 122 3344445554333 33221 24678999988777776778889999
Q ss_pred EEEEcCCCC-CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc-cC
Q 001579 704 IVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT 777 (1050)
Q Consensus 704 vv~V~~d~~-g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~g-l~ 777 (1050)
++.++.+++ +.+|+++|+++++++.+++++|++++| |.+|+.- +++++|+++|+++|+++++|+++..-. .+ ..
T Consensus 139 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~ 218 (391)
T PRK07309 139 IVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPH 218 (391)
T ss_pred EEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCC
Confidence 999998765 479999999999755457999999998 4789763 369999999999999999999853211 01 00
Q ss_pred CC-CcccCc--EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHH
Q 001579 778 SP-GYIGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1050)
Q Consensus 778 ~p-g~~GaD--v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1050)
.+ ..+..| ++..+++|+|++| |.++|++++++++...+-.. . .....+.+...+.
T Consensus 219 ~~~~~~~~~~~i~~~S~SK~~g~~----GlRvG~~v~~~~~~~~~~~~------------~--~~~~~~~~~~~q~---- 276 (391)
T PRK07309 219 VSIAEYLPDQTILINGLSKSHAMT----GWRIGLIFAPAEFTAQLIKS------------H--QYLVTAATTMAQF---- 276 (391)
T ss_pred CCHHHhccCCEEEEecChhhccCc----cceeEEEEeCHHHHHHHHHH------------H--hhcccCCChHHHH----
Confidence 01 111223 6778899998655 67899999987765543210 0 0001111111121
Q ss_pred HHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHH-HHCCc
Q 001579 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGF 932 (1050)
Q Consensus 855 ~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL-~d~Gi 932 (1050)
++..++. .+..-.....+...++.+++.+.|++. +.+. .+.+.++ +.+++++ ..+.+..+++++| .++||
T Consensus 277 ~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~p~gg~~--~~~~l~~---~~~~~~~~~~~~l~~~~gv 348 (391)
T PRK07309 277 AAVEALT-NGKDDALPMKKEYIKRRDYIIEKMTDLGFKII--KPDGAFY--IFAKIPA---GYNQDSFKFLQDFARKKAV 348 (391)
T ss_pred HHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHHHCCCeec--CCCeeEE--EEEECCC---CCCCCHHHHHHHHHHhCCE
Confidence 1222222 121112233344456778888888775 3321 1222221 2345432 0123567888875 47899
Q ss_pred ccC-CCCC-C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 933 HGP-TMSW-P-VPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 933 ~~~-~~~~-p-v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
.+. ...| + ..+.+||++.. +.+++++.++.|++++++.
T Consensus 349 ~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 349 AFIPGAAFGPYGEGYVRLSYAA--SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence 864 3223 2 24789999874 5788999999988887654
No 256
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.64 E-value=1.8e-14 Score=166.85 Aligned_cols=285 Identities=15% Similarity=0.162 Sum_probs=181.7
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~ 714 (1050)
.++++.+++++|.+...+..++|++.. ...+++.+. .++++|++++..|..++..+...|.+++.+++ .++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~--l~~~~~~l~-----~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~ 141 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEI--LELLARAYL-----GPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYG 141 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHH--HHHHHHHhc-----CCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCC
Confidence 478888999999876555556665532 122233321 24578999887665555557789999999998 3467
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHc--CCEEEEeccccccc-cccCCCC----cccCc-
Q 001579 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQ-VGLTSPG----YIGAD- 785 (1050)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~--G~~v~vD~A~~~al-~gl~~pg----~~GaD- 785 (1050)
+|+++++++++ +++++|++++|+ .+|.+. +.++|.++++.+ |+++++|+++.... .+...++ +...+
T Consensus 142 ~~~~~l~~~~~---~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 217 (367)
T PRK02731 142 HDLDAMLAAVT---PRTRLVFIANPNNPTGTYL-PAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNV 217 (367)
T ss_pred CCHHHHHHHhC---CCCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCE
Confidence 89999999996 688899999994 789887 688888888875 89999999853211 0100110 11123
Q ss_pred EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHCh
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1050)
Q Consensus 786 v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1050)
+++.++.|+|+ .+|.++|++++++++...+..- ....+++ ...+ .++..++. ..
T Consensus 218 i~~~S~SK~~g----~~G~RiG~l~~~~~~~~~l~~~--------------~~~~~~~--~~~~----~~a~~~l~--~~ 271 (367)
T PRK02731 218 VVTRTFSKAYG----LAGLRVGYGIAPPEIIDALNRV--------------RQPFNVN--SLAL----AAAVAALD--DD 271 (367)
T ss_pred EEEeeehHhhc----CcccceeeeeCCHHHHHHHHHc--------------cCCCCCC--HHHH----HHHHHHhC--CH
Confidence 44556778774 3477889999987765543210 0001111 1111 12223332 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC-CCCCCC
Q 001579 866 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWPVPG 943 (1050)
Q Consensus 866 eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~-~~pv~~ 943 (1050)
+.+++..+....+.+++.+.|++. +.+. + +.+.+ +.++++ .+.+..+++++|.++||.+... .|..++
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~-~~g~~---~~i~~~-----~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 341 (367)
T PRK02731 272 AFVEKSRALNAEGMAWLTEFLAELGLEYI-P-SVGNF---ILVDFD-----DGKDAAEAYQALLKRGVIVRPVAGYGLPN 341 (367)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccC-C-CCceE---EEEECC-----CCCCHHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 334555555566677888888775 3321 1 12222 455553 2357889999999999987543 233457
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 944 TLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 944 ~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
.+||++. +.+|+++|+++|+++++
T Consensus 342 ~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 342 ALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred eEEEecC---CHHHHHHHHHHHHHHHh
Confidence 8999985 68999999999998753
No 257
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=3.1e-14 Score=164.06 Aligned_cols=283 Identities=18% Similarity=0.193 Sum_probs=183.5
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~ 714 (1050)
.++++.++++++.+...+..++|++. +..++++.+. .++++|+++...++.+...++..|.+++.++.++++.
T Consensus 62 ~~lr~~ia~~~~~~~~~i~it~G~~~--~l~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 134 (351)
T PRK14807 62 EKLREELARYCSVVPTNIFVGNGSDE--IIHLIMLAFI-----NKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYT 134 (351)
T ss_pred HHHHHHHHHHhCCCcccEEEecCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence 46788899999987655555666553 2223334331 2457899987755544455788999999999987788
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCC---CcccCcEEEeC
Q 001579 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP---GYIGADVCHLN 790 (1050)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p---g~~GaDv~~~~ 790 (1050)
+|+++++++++. .++++|++++| |.+|.+- +.+++.+++++++.++++|+++.. +.+-..+ ....--+++.+
T Consensus 135 ~d~~~l~~~~~~--~~~k~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~ivDe~y~~-~~~~~~~~~~~~~~~vi~~~S 210 (351)
T PRK14807 135 YDVGSFIKVIEK--YQPKLVFLCNPNNPTGSVI-EREDIIKIIEKSRGIVVVDEAYFE-FYGNTIVDVINEFENLIVLRT 210 (351)
T ss_pred CCHHHHHHHhhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCEEEEeCcchh-hcccchHHHhhhCCCEEEEec
Confidence 999999999972 47889999999 4799887 799999999998999999998632 1111111 11222366788
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
++|+|++| |.++|+++.++++...+-.. +...+++ ...+. ++..++. ...+.+
T Consensus 211 ~SK~~~~~----GlRiG~~v~~~~~~~~~~~~--------------~~~~~~~--~~~q~----~~~~~l~---~~~~~~ 263 (351)
T PRK14807 211 LSKAFGLA----GLRVGYAVANENILKYLNLV--------------KSPYNIN--SLSQV----IALKVLR---TGVLKE 263 (351)
T ss_pred chHhcccc----hhceeeeecCHHHHHHHHHc--------------cCCCCcC--HHHHH----HHHHHHh---HHHHHH
Confidence 89998654 78899999877665543210 0011111 11222 1222222 223455
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC--CCCCCEEEEE
Q 001579 871 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS--WPVPGTLMIE 948 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~--~pv~~~lrI~ 948 (1050)
..+....+.+++.+.|++...+.+..+.+.+ +.+++. +.+++.+.|.++|+.+.... +...+.+||+
T Consensus 264 ~~~~~~~~r~~l~~~l~~~~g~~~~~~~~~~---~~i~~~--------~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis 332 (351)
T PRK14807 264 RVNYILNERERLIKELSKIPGIKVYPSKTNF---ILVKFK--------DADYVYQGLLERGILVRDFSKVEGLEGALRIT 332 (351)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEECcCCccE---EEEEcC--------CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEE
Confidence 5555566777888888764232222222322 345543 46789999999999874332 2235789999
Q ss_pred cCCCCCHHHHHHHHHHHHHHH
Q 001579 949 PTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 949 ~te~~t~eeid~fv~aL~~i~ 969 (1050)
+. +.++.++|+++|++++
T Consensus 333 ~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 333 VS---SCEANDYLINGLKELL 350 (351)
T ss_pred cC---CHHHHHHHHHHHHHhh
Confidence 85 5788999999998753
No 258
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.64 E-value=2.4e-14 Score=170.13 Aligned_cols=320 Identities=16% Similarity=0.188 Sum_probs=196.9
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC-CCeeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G-~d~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..||+|..++..++..+...-..|. .|. +...++.+.|++++. ++.+ ++.+||++++++++..+|+
T Consensus 111 ~~lGh~~p~v~~av~~ql~~~~~~~--~~~----------~~~~~lAe~l~~~~p~~~~v-~f~~SGsEA~e~AlklAR~ 177 (474)
T PLN02482 111 AIIGHADDEVLAALAETMKKGTSFG--APC----------LLENVLAEMVIDAVPSVEMV-RFVNSGTEACMGVLRLARA 177 (474)
T ss_pred cccCCCCHHHHHHHHHHHhhCCCCC--CCC----------HHHHHHHHHHHHhCCCCCEE-EEeCChHHHHHHHHHHHHH
Confidence 4578888777777666532211111 111 234478888998874 4444 5678999999888888887
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHh-------------CCC------EEEEEcCCCCCCCCHHHHHHHHHcCCCC
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAM-------------CGM------KIVSVGTDAKGNINIEELRKAAEANRDN 730 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~-------------~G~------~vv~V~~d~~g~iD~e~L~~~i~~~~~~ 730 (1050)
| ++|++|| +..++||........ .|+ .++.++. .|+++|++.++++.++
T Consensus 178 ~------tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~~~~~ 246 (474)
T PLN02482 178 Y------TGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-----NDLEAVKKLFEANKGE 246 (474)
T ss_pred h------cCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-----CChHHHHHHHHhCCCc
Confidence 6 2345565 567899965332111 111 1222332 2899999999877778
Q ss_pred EEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCc------c--cCcEEEeCCccccccC
Q 001579 731 LSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIP 798 (1050)
Q Consensus 731 taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~------~--GaDv~~~~~hKtf~~P 798 (1050)
+++|+++.. +..|.+.+ .+++|.++|++||+++++|.++ .|+ +.|. + .+|++++ .|.++
T Consensus 247 iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~----tGf-R~g~~ga~~~~gv~PDi~t~--gK~lg-- 317 (474)
T PLN02482 247 IAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM----TGF-RIAYGGAQEYFGITPDLTTL--GKVIG-- 317 (474)
T ss_pred eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc----cCe-ecCcchHhHHhCCCCCEEEe--cchhh--
Confidence 888887653 45677652 3789999999999999999874 344 3322 2 3688776 58774
Q ss_pred CCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHH
Q 001579 799 HGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 878 (1050)
Q Consensus 799 ~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~ 878 (1050)
+|-| +|.++.++++++.+... +. ....+++.|+++.++++.+.|..+..+++. ++...+
T Consensus 318 --gG~P-igav~g~~ei~~~~~~~--~~-------------~~~~~T~~gnpl~~aAala~L~~l~~~~~~---~~~~~~ 376 (474)
T PLN02482 318 --GGLP-VGAYGGRREIMEMVAPA--GP-------------MYQAGTLSGNPLAMTAGIHTLKRLQQPGTY---EYLDKI 376 (474)
T ss_pred --CCCc-eEEEEEcHHHHHhhccC--CC-------------cccccCcchhHHHHHHHHHHHHHHhccCHH---HHHHHH
Confidence 4435 66678888877655210 00 011123446777788888899988665543 445567
Q ss_pred HHHHHHHHhcc-----CCeeecCCCCccceeEEEecccc------cccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEE
Q 001579 879 ANYMAKRLEKH-----YPILFRGVNGTVAHEFIVDLRGL------KNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMI 947 (1050)
Q Consensus 879 a~yl~~~L~~~-----~~v~~~g~~g~~~~e~i~~~~~~------~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI 947 (1050)
.++|+++|+++ +++...+. +..+. +.|...+. +.........+.+.|.++|+.+....+|. +
T Consensus 377 g~~l~~~L~~l~~~~g~~~~~~~v-~g~~g-i~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~-~---- 449 (474)
T PLN02482 377 TKKLIQGILEAGKKAGHEMCGGYI-SGMFG-FFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA-G---- 449 (474)
T ss_pred HHHHHHHHHHHHHhcCCCEEEccc-ceEEE-EEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCC-C----
Confidence 88999999875 22221111 11111 11211110 00000113467888999999876444332 1
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 948 EPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 948 ~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
.|+..+|++|||++++++.+++.++
T Consensus 450 ~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 450 FTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 2777899999999999999988653
No 259
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.64 E-value=1e-13 Score=164.47 Aligned_cols=327 Identities=14% Similarity=0.152 Sum_probs=202.8
Q ss_pred ccccccccCcchhhhhccccccccccCCCC-CchhhcccHHHHHHHHHHHHHHhhCCC----eeeeccCchHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPF-APADQAQGYQEMFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLM 666 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~-~p~e~~~G~~~~i~el~~~lael~G~d----~~~l~~~sGa~ge~a~Ll 666 (1050)
..+|+|.+++..++..+... ..+ .++. .+ .+...++.+.|+++++.. ...+..+||++++++++.
T Consensus 51 ~~lGh~~p~i~~ai~~q~~~-~~~--~~~~~~~-------~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~Alk 120 (442)
T TIGR00709 51 LALGHNHPNMKQKILDYLQS-GLP--LHTLDLT-------TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIK 120 (442)
T ss_pred hcCCCCCHHHHHHHHHHHHh-ccC--ccccccC-------cHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHH
Confidence 46789988887776665322 111 1110 11 133457888999998532 334666899999999999
Q ss_pred HHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC-------C-----EEEEEcCCCCCCC--------CH----HHHH
Q 001579 667 VIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------M-----KIVSVGTDAKGNI--------NI----EELR 721 (1050)
Q Consensus 667 air~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G-------~-----~vv~V~~d~~g~i--------D~----e~L~ 721 (1050)
.+|.| . +|++|| ...++||....+....| . .+..++....... +. +.++
T Consensus 121 lAr~~---t---gr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (442)
T TIGR00709 121 LAKTY---T---GRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194 (442)
T ss_pred HHHHh---c---CCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 88877 2 244455 57799998876654332 1 1334443211111 11 2234
Q ss_pred HHHHc---CCCCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcE
Q 001579 722 KAAEA---NRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADV 786 (1050)
Q Consensus 722 ~~i~~---~~~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv 786 (1050)
+.+++ ..+++++|+++.. +..|++. +.+++|+++|++||+++++|.+ +.||.+.|.+ -+|+
T Consensus 195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~a~~~~gv~PDi 270 (442)
T TIGR00709 195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEV----QAGFGRSGTMFAFEHAGIEPDF 270 (442)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc----ccCCCCCCchhHHHHcCCCCcE
Confidence 44431 2357888888764 4456553 3699999999999999999986 5677666643 3688
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+++ .|.++ + |..+|.+++++++..+.+.. .+ +++.|+++.++++.+.|..+.++
T Consensus 271 v~~--gK~l~----~-G~Pigav~~~~~~~~~~~~~----------------~~---~T~~gnpla~aaa~a~L~~i~~~ 324 (442)
T TIGR00709 271 VVM--SKAVG----G-GLPLAVLLIAPEFDAWQPAG----------------HT---GTFRGNQLAMVTGTEALNYWKDD 324 (442)
T ss_pred EEE--ccccc----C-CcccEEEEEchHHhccCCCc----------------CC---CCCCcCHHHHHHHHHHHHHHHhc
Confidence 886 58774 3 46688888887643332110 01 12345677777888888888777
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccccccc------C--CC-CHHHHHHHHHHCCc
Q 001579 867 GLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNT------A--GI-EPEDVAKRLMDYGF 932 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~------~--g~-~~~~vakrL~d~Gi 932 (1050)
++.+ +...+.++|.++|+++ ++++ ..|. |.. +-+.+..-+.. . .. ....+.+.|.++|+
T Consensus 325 ~l~~---~~~~~g~~l~~~L~~l~~~~~~v~~vrG~-Gl~---~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv 397 (442)
T TIGR00709 325 NLAQ---NAQERGERITSFLDDMIKEHPCIGNVRGR-GLM---QGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGL 397 (442)
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHhCCCeeeeecc-ceE---EEEEEccCcccccccccCCcchHHHHHHHHHHHHCCe
Confidence 6654 4446788888888764 3322 2221 322 12222110000 0 00 13567778889999
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 933 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 933 ~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
.+.... ...+.|++.|+..+|++|||+++++|.+++.++
T Consensus 398 l~~~~~-~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 398 LLETGG-REGEVFRLLCPITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred EEeecC-CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 874321 114789999999999999999999999998876
No 260
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.64 E-value=2.8e-14 Score=153.52 Aligned_cols=334 Identities=17% Similarity=0.236 Sum_probs=219.3
Q ss_pred HHHHHHHHHhccccCcccccccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeee
Q 001579 572 ELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFS 651 (1050)
Q Consensus 572 e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~ 651 (1050)
|-.+|+.-|+.- +.+..|+|++|+-.+...+.- . .+.+. - .=|...+.++.+.+.+++|++.+
T Consensus 57 eGk~ylDflsay------saVnqGhchpki~~aLqeq~~-k---Ltlss----r--afYnd~~~~f~~~vt~lf~~~kv- 119 (427)
T KOG1402|consen 57 EGKEYLDFLSAY------SAVNQGHCHPKIIKALQEQAD-K---LTLSS----R--AFYNDVLGEFAEYVTKLFGYDKV- 119 (427)
T ss_pred Cccchhhhhhhh------hhcccCCCCHHHHHHHHHHHh-H---hhhhh----H--HHhhhhHHHHHHHHHHhcCccee-
Confidence 334566655542 334679999888776555421 0 00100 0 01335566899999999999986
Q ss_pred eccCchHHHHHHHHHHHHHHH-HhcCCCCCC-EEE-EcCCCCCccHH---------HHHhCC----CEEEEEcCCCCCCC
Q 001579 652 LQPNAGAAGEYAGLMVIRAYH-KARGDHHRN-VCI-IPVSAHGTNPA---------TAAMCG----MKIVSVGTDAKGNI 715 (1050)
Q Consensus 652 l~~~sGa~ge~a~Llair~y~-~~~G~~~r~-~Vl-ip~saHgt~pa---------~a~~~G----~~vv~V~~d~~g~i 715 (1050)
+-.|.|++|.++++..+|.|. ..++..+.. +|| .-.+.||..-. +-+.+| ..+..||+ -
T Consensus 120 lpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-----~ 194 (427)
T KOG1402|consen 120 LPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-----G 194 (427)
T ss_pred eecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-----C
Confidence 557889998889999888653 234433222 333 35678875322 222222 12445555 3
Q ss_pred CHHHHHHHHHcCCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------c
Q 001579 716 NIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------G 783 (1050)
Q Consensus 716 D~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------G 783 (1050)
|.++|+.+++ +++.+++|++.- ...|++-| .++++.++|.+|+.+++.|.. |.|+.+.|++ -
T Consensus 195 d~eale~~l~--~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEv----QTGl~RTGk~la~d~env~ 268 (427)
T KOG1402|consen 195 DAEALEVALK--SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEV----QTGLARTGKLLACDYENVR 268 (427)
T ss_pred CHHHHHHHhc--CCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhh----hhcccccCcEEEeehhhcC
Confidence 8999999998 489999998854 46788864 489999999999999999975 7888898864 4
Q ss_pred CcEEEeCCccccccCCCCCCCcceeeeecccccCCC-CCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHH
Q 001579 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1050)
Q Consensus 784 aDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~l-pg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1050)
+|++.+ .|.|+ ||--.+..+.++++++-.+ ||. |+ + ++.|+++.+..+.|.+..
T Consensus 269 PDivil--gKalS----GG~~Pvsavl~~~~im~~~~pge----------Hg--------s-TyggNpLg~~vaiAalev 323 (427)
T KOG1402|consen 269 PDIVIL--GKALS----GGVYPVSAVLADDDIMLNIKPGE----------HG--------S-TYGGNPLGCAVAIAALEV 323 (427)
T ss_pred CCeEEE--ecccc----CCeeeeEEEEecHHHHhccCCCc----------cc--------c-ccCCChHHHHHHHHHHHH
Confidence 799887 58885 3322444445555544333 331 11 1 133556666667777877
Q ss_pred HChhhHHHHHHHHHHHHHHHHHHHhcc---C-Ce--eecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 001579 863 MGSKGLTEASKIAILNANYMAKRLEKH---Y-PI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1050)
Q Consensus 863 lG~eGl~~~a~~~~~~a~yl~~~L~~~---~-~v--~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~ 936 (1050)
+-++- +++++......|+.+|.++ + .+ ...|. | .++..+|+.. ++.+.++.+++-+|.++|..+.+
T Consensus 324 i~eek---L~era~~lG~~l~~~L~~l~~~~p~~v~~VRGr-G-l~~ai~i~~~---~~~~~~aw~~cl~lk~~g~LAkp 395 (427)
T KOG1402|consen 324 IVEEK---LVERAAKLGEILRDQLNKLQKKFPHVVKEVRGR-G-LLNAIVINPS---KTSGQDAWDVCLALKENGLLAKP 395 (427)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHhccccccchhheeecc-c-eEEEEEeccc---cccchhHHHHHHcccccccccCC
Confidence 76664 4455667788899999875 2 11 12232 2 2333445432 23457889999999999999864
Q ss_pred CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 937 MSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 937 ~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
.. .+.+|+.|+..++++|++.-++++.+.+
T Consensus 396 tH---~~IiRfaPPL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 396 TH---GNIIRFAPPLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred CC---CCeEEecCCcccCHHHHHHHHHHHHHHh
Confidence 43 4689999999999999999999988764
No 261
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.64 E-value=7.9e-15 Score=162.11 Aligned_cols=292 Identities=17% Similarity=0.135 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH--HH-hCCCEEEE
Q 001579 630 YQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT--AA-MCGMKIVS 706 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~--a~-~~G~~vv~ 706 (1050)
--+...++++.+++++|...+ ++..+|++++..+ ++.. .. ++..||+...+|-..... .+ ..+...+.
T Consensus 33 ~D~~~~~~e~~~ae~~g~~a~-~Fv~sGT~aN~la---l~~~-~~----~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~ 103 (342)
T COG2008 33 EDPTTNALEQRIAELFGKEAA-LFVPSGTQANQLA---LAAH-CQ----PGESVICHETAHIYTDECGAPEFFGGGQKLP 103 (342)
T ss_pred CCHHHHHHHHHHHHHhCCceE-EEecCccHHHHHH---HHHh-cC----CCCeEEEeccccceecccCcHHHHcCCceec
Confidence 345677899999999999544 5566788877433 3332 22 345788888888544332 22 33333333
Q ss_pred EcCCCCCCCCHHHHHHHHHc----CCCCEEEEEEEcCCCccccc--cCHHHHHHHHHHcCCEEEEeccc-cccccccCCC
Q 001579 707 VGTDAKGNINIEELRKAAEA----NRDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGAN-MNAQVGLTSP 779 (1050)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~----~~~~taaV~vt~Pn~~Gv~~--~di~eI~~la~~~G~~v~vD~A~-~~al~gl~~p 779 (1050)
+.-.++|.+++++|+++|.. |.+...++.++.++..|.+. +.|++|+++||++|+.||+|||- .|+++.+..+
T Consensus 104 ~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~ 183 (342)
T COG2008 104 IVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVA 183 (342)
T ss_pred cCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCC
Confidence 33347899999999999873 22344555566667678775 35899999999999999999987 3555555433
Q ss_pred C---cccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHH
Q 001579 780 G---YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1050)
Q Consensus 780 g---~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1050)
- ..++|++.+.+.|.. |.|+..+++.+.+++..+.-. .|-.+... .++..++++
T Consensus 184 ~~~~~~~~D~v~~~~tK~g------~~~~gAiv~gn~~~~~~a~~~-------------rK~~Ggl~----~k~r~laA~ 240 (342)
T COG2008 184 LKTIKSYVDSVSFCLTKGG------GAPVGAIVFGNRDFAKRARRW-------------RKRAGGLM----RKARFLAAQ 240 (342)
T ss_pred HHHHHhhCCEEEEecccCC------cceeeeEEEcCHHHHHHHHHH-------------HHHhcccH----hhhhHHHHH
Confidence 2 248999999999954 344555566666655443210 01111111 144455555
Q ss_pred HHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 001579 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1050)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~ 934 (1050)
|.+ ++...-.+....+....|+.|+++|.+. +++.++ +..|.+.++++. ...+.|...||..
T Consensus 241 ~~~--~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~----~~tN~vf~~l~~----------~~i~~l~~~~~~~ 304 (342)
T COG2008 241 GLY--ALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP----VETNMVFVRLPE----------SAIEALRLAGALF 304 (342)
T ss_pred HHH--HHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC----CcccEEEEECCh----------HHHHHHHhhchhh
Confidence 554 3444445556666555688999988853 555442 345667676641 2226666666654
Q ss_pred CC--CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 935 PT--MSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 935 ~~--~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
.. +..+....+|+..+.-+|+++||+|++.+++.+
T Consensus 305 ~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 305 YRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred eeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 33 221111379999999999999999999998764
No 262
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.64 E-value=3.9e-14 Score=164.02 Aligned_cols=271 Identities=20% Similarity=0.138 Sum_probs=182.6
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhh-
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID- 292 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~- 292 (1050)
.++++.+|++.+ .++.++.+|++++.+++.++ +. +||+||++...|..+...++..++.+|++++.++.++..
T Consensus 54 ~~Le~~lA~l~~---~~~v~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~ 127 (366)
T PRK07582 54 RALEAALGELEG---AEALVFPSGMAAITAVLRAL-LR--PGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE 127 (366)
T ss_pred HHHHHHHHHHcC---CCEEEECCHHHHHHHHHHHh-cC--CCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH
Confidence 446678999982 34678888888777766654 23 889999999999877766554445689999999875432
Q ss_pred ccCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCCcce
Q 001579 293 YKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPHA 370 (1050)
Q Consensus 293 ~l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GGP~~ 370 (1050)
.+.++++.|++.+| |.+|.+.|+++|+++||++|++++|+. .++......|.++|+|++++|. |++++| +|--+
T Consensus 128 ~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~-t~~~~~~~~p~~~g~Divv~S~sK~l~G~---~g~~~ 203 (366)
T PRK07582 128 AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDN-TTATPLGQRPLELGADLVVASDTKALTGH---SDLLL 203 (366)
T ss_pred HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEEC-CCCCccccCchhcCCcEEEecccccccCC---CCeeE
Confidence 23468999999998 678999999999999999999999943 3332333456679999999998 776543 22235
Q ss_pred EEEEEe-hhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHH
Q 001579 371 AFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQR 449 (1050)
Q Consensus 371 G~la~~-~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~ 449 (1050)
|+++++ +++.+++. ..|+..| ++..++ .+ |+...|-+-+..+.++
T Consensus 204 G~v~~~~~~l~~~l~-------------------------~~~~~~g----~~~~~~---~a--~l~~r~l~tl~~R~~~ 249 (366)
T PRK07582 204 GYVAGRDPELMAAVE-------------------------RWRLLAG----AIPGPF---EA--WLAHRSLGTLGLRFAR 249 (366)
T ss_pred EEEEcCcHHHHHHHH-------------------------HHHHHhC----CCCCHH---HH--HHHHhccccHHHHHHH
Confidence 888875 44444331 0011111 011122 11 2334444456666688
Q ss_pred HHHHHHHHHHHHhcCCCEEEcC----C--C-----------CccEEEEecCCHHHHHHHHHHcCceee--------e---
Q 001579 450 VHGLAGTFALGLKKLGTVEVQG----L--P-----------FFDTVKVKCADAHAIASAAYKIEMNLR--------V--- 501 (1050)
Q Consensus 450 ~~~~a~~l~~~L~~~G~~~l~~----~--~-----------~~~~v~i~~~~~~~i~~~L~~~GI~~~--------~--- 501 (1050)
..+++..+++.|++...++-+. + + +...|+|.+++.+++.+.|...++... .
T Consensus 250 ~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~ 329 (366)
T PRK07582 250 QCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVVAATSFGGVHTSAD 329 (366)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCcceecccCCCccchhh
Confidence 8899999999999875454221 1 2 223577777665556666666666431 1
Q ss_pred --------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 502 --------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 502 --------~~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+.++.||+|++..++++.|++|.++|.
T Consensus 330 ~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 330 RRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred hHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 124679999999999999999999985
No 263
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.64 E-value=1.5e-14 Score=165.13 Aligned_cols=272 Identities=18% Similarity=0.105 Sum_probs=174.4
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc----
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 288 (1050)
..++++.+++++| ..++.++.+||.+...++.++ .++||+|++++..|+++...+. .+...|++++.++.
T Consensus 34 ~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l---~~~gd~v~~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 107 (338)
T cd06502 34 TAKLEARAAELFG--KEAALFVPSGTAANQLALAAH---TQPGGSVICHETAHIYTDEAGA-PEFLSGVKLLPVPGENGK 107 (338)
T ss_pred HHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHh---cCCCCeEEEecCcceeeecCCc-HHHHcCceEEeecCCCCc
Confidence 4566789999999 445778888886655544443 2378999999999987654311 12225777777754
Q ss_pred ---hhhhc-cCC-------CeeEEEEEcCCCCee---EccHHHHHHHHHhCCcEEEEEe-cCc----cccCCCCCCcccc
Q 001579 289 ---KDIDY-KSG-------DVCGVLVQYPGTEGE---VLDYGDFIKNAHANGVKVVMAT-DLL----ALTILKPPGELGA 349 (1050)
Q Consensus 289 ---~~l~~-l~~-------~t~~V~v~~pn~~G~---i~di~~I~~~ah~~galliV~a-~~~----alg~l~~pg~~Ga 349 (1050)
+++++ +.+ ++++|++.+||..|. +.|+++|+++||++|++++|+. +.. +.+........++
T Consensus 108 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~ 187 (338)
T cd06502 108 LTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGV 187 (338)
T ss_pred CCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcC
Confidence 34554 443 688999999966675 4578899999999999999942 110 1111001113578
Q ss_pred eEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHH
Q 001579 350 DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (1050)
Q Consensus 350 Divvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a 428 (1050)
|+++.+. |+|+.| +.++++.++++.+++.... . + ..++.+. .++.+
T Consensus 188 d~~~~s~sK~~~~~------~g~~~~~~~~~~~~~~~~~----------~----------~----~~~~~~~---~~~~~ 234 (338)
T cd06502 188 DSVSFCLSKGGGAP------VGAVVVGNRDFIARARRRR----------K----------Q----AGGGMRQ---SGFLA 234 (338)
T ss_pred CEEEEeccccCCCc------cceEEECCHHHHHHHHHHH----------H----------H----hCCChhh---HHHHH
Confidence 9999887 777654 3356777777766552100 0 0 0011111 12211
Q ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC----HHHHHHHHH---HcCceeee
Q 001579 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD----AHAIASAAY---KIEMNLRV 501 (1050)
Q Consensus 429 ~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~----~~~i~~~L~---~~GI~~~~ 501 (1050)
.++ +..+...+..++.++..++++++.+.|+++| +.+.. +..+.+.+..+. ..++.+.+. ++|+.++.
T Consensus 235 -~a~--~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~ 309 (338)
T cd06502 235 -AAG--LAALENDLWLRRLRHDHEMARRLAEALEELG-GLESE-VQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYA 309 (338)
T ss_pred -HHH--HHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-CCccc-ccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEe
Confidence 112 1233344667777899999999999999988 64432 333445555542 234444443 67998877
Q ss_pred ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 502 VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 502 ~~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
...+.+|++++..+|++|+++++++|.
T Consensus 310 ~~~~~lRi~~~~~~~~~~i~~~~~~l~ 336 (338)
T cd06502 310 WGEGGVRFVTHWDTTEEDVDELLSALK 336 (338)
T ss_pred cCCCeEEEEeecCCCHHHHHHHHHHHh
Confidence 655899999999999999999999985
No 264
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=1.1e-13 Score=164.25 Aligned_cols=329 Identities=16% Similarity=0.184 Sum_probs=205.2
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..+|++..++..++..+. ....+... .+.+ .+...++.+.|+++++.+ .-.++.+||+++++++++.+|.
T Consensus 65 ~~lGh~~p~i~~Ai~~ql-~~~~~~~~-~~~~-------~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~ 135 (457)
T PRK05639 65 ASTGYSHPKLVKAVQEQV-ALIQHSMI-GYTH-------SERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKF 135 (457)
T ss_pred hccCCCCHHHHHHHHHHH-Hhcccccc-CccC-------CHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHH
Confidence 467888877776666553 21111100 0110 123447888999988643 2346688999999999988886
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC--------C-----EEEEEcCCCCCC--------CCH--------HHH
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------M-----KIVSVGTDAKGN--------INI--------EEL 720 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G--------~-----~vv~V~~d~~g~--------iD~--------e~L 720 (1050)
| ++|.+|| ...++||....+..+.| + .++.+|...... -|. +.|
T Consensus 136 ~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l 209 (457)
T PRK05639 136 S------TRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYL 209 (457)
T ss_pred h------cCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHH
Confidence 5 2345565 46789998765543322 1 245565532110 122 345
Q ss_pred HHHHHc---CCCCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCc
Q 001579 721 RKAAEA---NRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GAD 785 (1050)
Q Consensus 721 ~~~i~~---~~~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaD 785 (1050)
++.+.. ..+++++|+++.- ...|++. ..+++|.++|++||+++++|.+ +.|+.+.|.+ -+|
T Consensus 210 e~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv----~tG~GrtG~~~a~~~~gv~PD 285 (457)
T PRK05639 210 ENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEV----QTGIGRTGKWFASEWFEVKPD 285 (457)
T ss_pred HHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech----hhccCcCchHHHHHhcCCCCC
Confidence 555422 2478999998754 3456654 2589999999999999999987 4566666643 368
Q ss_pred EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHCh
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1050)
Q Consensus 786 v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1050)
++++ .|.++ +| -++|.+++++++.....+.. +. ++.|++..++++.+.+..+..
T Consensus 286 iv~~--gK~l~----gG-~pi~av~~~~~i~~~~~~~~------------------~~-T~~g~p~~~aaa~a~l~~l~~ 339 (457)
T PRK05639 286 LIIF--GKGVA----SG-MGLSGVIGRKELMDLTSGSA------------------LL-TPAANPVISAAAEATLEIIEE 339 (457)
T ss_pred EEEe--chhhc----CC-CcceeEEehHHHHhhcCCCc------------------cc-CCCcCHHHHHHHHHHHHHHHH
Confidence 8886 58774 33 44788888888776322110 01 133566667778888888877
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccc-ccccCCCCHHHHHHHHHHCCcccCCCCC
Q 001579 866 KGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1050)
Q Consensus 866 eGl~~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~-~~~~~g~~~~~vakrL~d~Gi~~~~~~~ 939 (1050)
+++.+ +...+.++|.++|+++ ++++ ..|. |.. . -+.+.. ...........+.+.|.++|+.+.....
T Consensus 340 ~~l~~---~~~~~g~~l~~~L~~l~~~~~~~~~VrG~-Gl~-~--gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~ 412 (457)
T PRK05639 340 ENLLK---NALKVGEFIKKRLLEMKESFEVIGDVRGK-GLM-I--GVEIVKENGKPDPELTGKICWRAFELGLILPSYGM 412 (457)
T ss_pred ccHHH---HHHHHHHHHHHHHHHHHHhCCCEEeeccc-eeE-E--EEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCC
Confidence 66543 3445788999999874 4432 2232 222 1 122210 0000001135688889999999854321
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 940 PVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 940 pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
..+.||+.|+..+|++|||+++++|.+++.++.
T Consensus 413 -~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 413 -FGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred -CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 147899999999999999999999999998764
No 265
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.64 E-value=5.7e-14 Score=165.17 Aligned_cols=306 Identities=14% Similarity=0.103 Sum_probs=191.1
Q ss_pred ccHHHHHHHHHHHHHHhhCCC---ee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD---SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d---~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
+|..++.+.+.+++.+..|.+ .. ++..++|++.. ..++++.+. .+++.|+++...+..+...++..|.+
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a--l~~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 153 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA--LAMLPSCFI-----NPGDVTLMTVPGYPVTGTHTKYYGGE 153 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH--HHHHHHHhC-----CCCCEEEEeCCCCccHHHHHHHcCCE
Confidence 577777777777776666654 33 46667776532 223333321 24678999988776666778899999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-cccc-
Q 001579 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGL- 776 (1050)
Q Consensus 704 vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~gl- 776 (1050)
++.++++++ ..+|+++|++++. +++++|++++| |.+|.+- +.+++|.++|+++|+++++|.++... ..+-
T Consensus 154 v~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~ 230 (410)
T PRK06290 154 VYNLPLLEENNFLPDLDSIPKDIK---EKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP 230 (410)
T ss_pred EEEEecCCCcCCcCCHHHHHHhhc---ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC
Confidence 999999864 4679999999886 67899999999 5789875 24889999999999999999986421 1110
Q ss_pred CC----CCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 777 TS----PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 777 ~~----pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
.. ++..+.+|++.++.|+|++| |.++|++++.+++...+... +....++++...+.
T Consensus 231 ~s~~~~~~~~~~~I~i~SfSK~~g~~----GlRiG~ii~~~~l~~~l~~~--------------~~~~~~~~~~~~q~-- 290 (410)
T PRK06290 231 LSFLSVPGAKEVGVEIHSLSKAYNMT----GWRLAFVVGNELIVKAFATV--------------KDNNDSGQFIAIQK-- 290 (410)
T ss_pred cChhcCCCccccEEEEeechhhcCCc----hhheEeEEeCHHHHHHHHHH--------------HhccccCCcHHHHH--
Confidence 00 11123458888889988644 67899999887765443210 00011111101111
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccc-c-CCCCHHHHHHHHHHC
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKN-T-AGIEPEDVAKRLMDY 930 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~-~-~g~~~~~vakrL~d~ 930 (1050)
++..++. . .+-+++..+...++.+++.+.|++. .+.+..+.+.++ +++.+++... . ...+..+++++|.++
T Consensus 291 --aa~~~l~-~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~p~g~f~--l~v~lp~~~~~~~~~~~~~~~~~~Ll~~ 363 (410)
T PRK06290 291 --AGIYALD-H-PEITEKIREKYSRRLDKLVKILNEV-GFKAEMPGGTFY--LYVKAPKGTKSGIKFENAEEFSQYLIKE 363 (410)
T ss_pred --HHHHHhh-C-cHHHHHHHHHHHHHHHHHHHHHHhC-CCeecCCCeeeE--EEEECCCccccCCCCCCHHHHHHHHHHh
Confidence 1112221 1 1224445555667788899999875 322212222221 3346542100 0 012577899999988
Q ss_pred Cccc--CCCCCCCCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Q 001579 931 GFHG--PTMSWPVPGTLMIEPTE-SESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 931 Gi~~--~~~~~pv~~~lrI~~te-~~t~eeid~fv~aL~~i~~ei 972 (1050)
|+.+ +...| ++.+||+++. ..++|+.++|+++|.+++..+
T Consensus 364 ~~v~~~p~~~~--~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 364 KLISTVPWDDA--GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCEEEECCccc--cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 6543 32223 4789999973 456789999999999887654
No 266
>PRK07036 hypothetical protein; Provisional
Probab=99.64 E-value=1.8e-13 Score=163.04 Aligned_cols=341 Identities=16% Similarity=0.202 Sum_probs=210.3
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..+|++.+++..++..+. ....+.. ++.. -..+...++.+.|++++..+ ...++.+||+++++++++.+|.
T Consensus 63 ~~lGh~~p~v~~Ai~~q~-~~~~~~~--~~~~-----~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~ 134 (466)
T PRK07036 63 VNVGYGREEMADAIADQA-RRLPYYT--PFGD-----MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHY 134 (466)
T ss_pred hcCCCCCHHHHHHHHHHH-HhCcccc--cccc-----cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHH
Confidence 467888888777766653 2211111 1100 00123457888888887532 1246778999999999999998
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC------------CEEEEEcCCC-----CCC-------CCHHHHHHHHH
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDA-----KGN-------INIEELRKAAE 725 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G------------~~vv~V~~d~-----~g~-------iD~e~L~~~i~ 725 (1050)
|...+|.++|++|| ...++||....+....| ..+..++... .|. ..++.+++.+.
T Consensus 135 ~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~ 214 (466)
T PRK07036 135 YFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKIL 214 (466)
T ss_pred HHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHH
Confidence 87667755566666 56789997755433221 1134444321 111 01355666665
Q ss_pred c-CCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCc-------cc--CcEEEeCC
Q 001579 726 A-NRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY-------IG--ADVCHLNL 791 (1050)
Q Consensus 726 ~-~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~-------~G--aDv~~~~~ 791 (1050)
+ +.+++++|+++.. +..|++.+ .+++|.++|++||+++|+|.+ +.|+.+.|. +| +|++++
T Consensus 215 ~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~~~~~~~gv~PDivt~-- 288 (466)
T PRK07036 215 SLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEV----VTGFGRLGHFFASEAVFGIQPDIITF-- 288 (466)
T ss_pred HcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeec----hhCCCcCchhhhhhhhcCCCCCEEEE--
Confidence 3 3578999998864 34577652 399999999999999999986 566666653 23 688877
Q ss_pred ccccccCCCCCC-CcceeeeecccccCCCCCC-ccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHH
Q 001579 792 HKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSH-PVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1050)
Q Consensus 792 hKtf~~P~g~GG-Pg~G~i~v~~~l~~~lpg~-~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1050)
.|.++ || -.+|.+++++++.+.+... ..+ . .. ...+++.|+++.++++.+.|..+..+++.
T Consensus 289 gK~l~-----gG~~Pi~av~~~~~i~~~~~~~~~~~---------~--~~-~~~~T~~gnpl~~aaa~a~Le~i~~~~l~ 351 (466)
T PRK07036 289 AKGLT-----SGYQPLGAVIISERLLDVISGPNAKG---------N--VF-THGFTYSGHPVACAAALKNIEIMEREGLC 351 (466)
T ss_pred ccccc-----cCccccEEEEEcHHHHHHHhcccCcC---------c--cc-ccCCCCCCCHHHHHHHHHHHHHHHhCCHH
Confidence 58773 44 2367777888776544211 000 0 00 01112446778888888999888766654
Q ss_pred HHHHHHHHHHHHHHHHHhcc--CCee--ecCCCCccceeEEEeccccc--c-cCCC---CHHHHHHHHHHCCcccCCCCC
Q 001579 870 EASKIAILNANYMAKRLEKH--YPIL--FRGVNGTVAHEFIVDLRGLK--N-TAGI---EPEDVAKRLMDYGFHGPTMSW 939 (1050)
Q Consensus 870 ~~a~~~~~~a~yl~~~L~~~--~~v~--~~g~~g~~~~e~i~~~~~~~--~-~~g~---~~~~vakrL~d~Gi~~~~~~~ 939 (1050)
+ +.....++|.++|+++ ++++ ..|. |.. +.+.+..-+ + .... ....+.+.|.++|+.+..
T Consensus 352 ~---~~~~~g~~l~~~L~~l~~~~~v~~vrG~-Gl~---~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~--- 421 (466)
T PRK07036 352 E---HVREVGPYFEERLASLRELPLVGDVRGD-HLM---ACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRP--- 421 (466)
T ss_pred H---HHHHHHHHHHHHHHHhccCCCEEEEEee-ceE---EEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEee---
Confidence 4 4446778888888764 3322 1221 221 122221100 0 0000 134677888899998742
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 940 PVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 940 pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
..+.++++|+..+|++|||+++++|.++++++.+
T Consensus 422 -~~~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~ 455 (466)
T PRK07036 422 -LEHLCVLSPPLIITRAQIDEIVAILRAAIEETAD 455 (466)
T ss_pred -cCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 2367999999999999999999999999887744
No 267
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.64 E-value=4e-14 Score=165.50 Aligned_cols=301 Identities=17% Similarity=0.175 Sum_probs=184.4
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--eeeecc-CchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SFSLQP-NAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~~l~~-~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++.+.+|.+ ...+.. ++++++.. ++++.+. .+++.|++++..|......+...|+++
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~---~~~~~l~-----~~g~~Vlv~~p~y~~~~~~~~~~g~~~ 141 (391)
T PRK08361 70 AGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATY---LAFESLL-----EEGDEVIIPDPAFVCYVEDAKIAEAKP 141 (391)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHH---HHHHHhc-----CCCCEEEEcCCCCcccHHHHHHcCCEE
Confidence 576666666666666655643 333333 44444443 2333321 245789999988877777788899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCcccccc--CHHHHHHHHHHcCCEEEEeccccccc-cccC-
Q 001579 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE--GIDEICKIIHDNGGQVYMDGANMNAQ-VGLT- 777 (1050)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~--di~eI~~la~~~G~~v~vD~A~~~al-~gl~- 777 (1050)
+.++++++ +.+|+++|+++++ +++++|++++| |.+|.+.+ .+++|+++|+++|+++++|+++..-. .+-.
T Consensus 142 ~~v~~~~~~~~~~d~~~l~~~i~---~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 218 (391)
T PRK08361 142 IRIPLREENEFQPDPDELLELIT---KRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKH 218 (391)
T ss_pred EEEecCCccCCCCCHHHHHHhcc---cccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCC
Confidence 99999765 4699999999997 67899999999 46898761 38999999999999999998863211 1100
Q ss_pred CC-Cc--ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHH
Q 001579 778 SP-GY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1050)
Q Consensus 778 ~p-g~--~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1050)
.+ .. ...++++.+++|+|+.| |.++|++++++++...+-.. ......++++ ..+.
T Consensus 219 ~~~~~~~~~~~i~~~s~SK~~~~~----GlRiG~~~~~~~~~~~~~~~------------~~~~~~~~~~--~~q~---- 276 (391)
T PRK08361 219 YPMIKYAPDNTILANSFSKTFAMT----GWRLGFVIAPEQVIKDMIKL------------HAYIIGNVAS--FVQI---- 276 (391)
T ss_pred CCHhhcCCCCEEEEecCchhcCCc----HhhhhhhccCHHHHHHHHHH------------HhhhccCCCh--HHHH----
Confidence 01 11 13467888999998644 45689999987665433100 0000112221 1111
Q ss_pred HHHHHHHHHCh--hhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCC
Q 001579 855 ISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 931 (1050)
Q Consensus 855 ~a~a~l~~lG~--eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~G 931 (1050)
++...+. .+. +.+++..+...++.+++.+.|++...+.+..+.+..+ +++++++ .+.+..+++++|. ++|
T Consensus 277 ~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~--~~~~l~~----~~~~~~~l~~~l~~~~g 349 (391)
T PRK08361 277 AGIEALR-SKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFY--VFANIDE----TGMSSEDFAEWLLEKAR 349 (391)
T ss_pred HHHHHhc-CCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEE--EEEECCC----CCCCHHHHHHHHHHhCC
Confidence 1111111 121 2455666666677888889998742232222222221 3455542 2457789999886 579
Q ss_pred cccCC-CCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 932 FHGPT-MSWP--VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 932 i~~~~-~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
|.+.. ..|. ..+.+||++.. +.++++..++.|+++++
T Consensus 350 v~v~pg~~f~~~~~~~iRi~~~~--~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 350 VVVIPGTAFGKAGEGYIRISYAT--SKEKLIEAMERMEKALE 389 (391)
T ss_pred EEEcCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 98643 2243 24789999874 56667776766666553
No 268
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.64 E-value=2.9e-14 Score=167.19 Aligned_cols=277 Identities=15% Similarity=0.129 Sum_probs=174.0
Q ss_pred HHHHH-HHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHH-hccCCCeEEEEc--
Q 001579 211 ESLLN-FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVS-- 286 (1050)
Q Consensus 211 e~l~e-~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~-~a~~~gi~v~~~-- 286 (1050)
+.+.+ .++.+++++|.+.+++. ..+||.++.+++.++ . ++||+|+++...|+.+...+.. .++..|.+++.+
T Consensus 64 ~~l~~~~~~~~~~~~g~~~~~v~-~~sgt~a~~~~l~~l-~--~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 139 (402)
T cd00378 64 DEIEDLAIERAKKLFGAEYANVQ-PHSGSQANLAVYFAL-L--EPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPY 139 (402)
T ss_pred HHHHHHHHHHHHHHhCCCceeee-cCCcHHHHHHHHHHh-c--CCCCEEEEecCccCccccccccccccccceeEEEecC
Confidence 44444 45678899999875543 346777777666555 2 3899999999999876554221 123346544433
Q ss_pred ---------Cchhhhc-c-CCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC-----CCCCcccce
Q 001579 287 ---------DLKDIDY-K-SGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGAD 350 (1050)
Q Consensus 287 ---------~~~~l~~-l-~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-----~~pg~~GaD 350 (1050)
|++++++ + .+++++|++.+|+ +|...|+++|+++||++|+++++++ .++.+.. ..+.. ++|
T Consensus 140 ~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~-~~~~~~~~~I~~l~~~~~~~li~D~-a~~~g~~~~g~~~~~~~-~~d 216 (402)
T cd00378 140 GVDPETGLIDYDALEKMALEFKPKLIVAGASA-YPRPIDFKRFREIADEVGAYLLVDM-AHVAGLVAGGVFPNPLP-GAD 216 (402)
T ss_pred CcCcccCCcCHHHHHHHHHhCCCCEEEecCcc-cCCCcCHHHHHHHHHhcCCEEEEEc-cchhhhhhcccCCCccc-CCc
Confidence 2344555 4 3578888877774 4788899999999999999999942 2233321 22233 789
Q ss_pred EEEecC-ccccccCCCCCcceEEEEEeh-hhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHH
Q 001579 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (1050)
Q Consensus 351 ivvgs~-k~~g~P~~~GGP~~G~la~~~-~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a 428 (1050)
++++|+ |+|+ ||.+|++.+++ ++.+++.... .+ + ..++++. +...+
T Consensus 217 v~~~s~sK~l~------G~~gg~i~~~~~~~~~~l~~~~---------~~-~-------------~~~~~~~---~~~~a 264 (402)
T cd00378 217 VVTTTTHKTLR------GPRGGLILTRKGELAKKINSAV---------FP-G-------------LQGGPHL---HVIAA 264 (402)
T ss_pred EEEeccccCCC------CCCceEEEeccHHHHHHHHHHh---------Cc-c-------------ccCCchH---HHHHH
Confidence 999998 7663 35556777665 6665541000 00 0 0011111 12222
Q ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCccEEEEecC--C--HHHHHHHHHHcCceeeee-
Q 001579 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA--D--AHAIASAAYKIEMNLRVV- 502 (1050)
Q Consensus 429 ~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~~~~~~v~i~~~--~--~~~i~~~L~~~GI~~~~~- 502 (1050)
+..++ ......+++++.+++.++++++++.|++.| ++++. +.....+.+.++ + ...+.+.|.++||.+...
T Consensus 265 ~~~al--~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~ 341 (402)
T cd00378 265 KAVAL--KEALEPEFKAYAKQVVENAKALAEALKERG-FKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNT 341 (402)
T ss_pred HHHHH--HHHhhHHHHHHHHHHHHHHHHHHHHHHhCC-CeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCc
Confidence 22222 222222667888899999999999999997 88763 222223445554 2 566777788899988531
Q ss_pred ---------cCCeEEEEeccCC----CHHHHHHHHHHHhC
Q 001579 503 ---------DSNTVTASFDETT----TLEDVDKLFIVFAG 529 (1050)
Q Consensus 503 ---------~~~~lris~~e~~----t~edId~lv~~l~~ 529 (1050)
.+..+|++++..+ +.+||+.+++.|..
T Consensus 342 ~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~ 381 (402)
T cd00378 342 LPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIAR 381 (402)
T ss_pred CCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHH
Confidence 2357999999865 79999999999973
No 269
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.64 E-value=1.3e-13 Score=164.00 Aligned_cols=328 Identities=14% Similarity=0.151 Sum_probs=203.8
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-----eeeeccCchHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-----SFSLQPNAGAAGEYAGLM 666 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-----~~~l~~~sGa~ge~a~Ll 666 (1050)
..+|++..++..++..+......+.... +. .+...++.+.|++++..+ .+.+..+||++++++++.
T Consensus 75 ~~lGh~~p~v~~Ai~~ql~~~~~~~~~~-~~--------~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~Alk 145 (464)
T PRK06938 75 LALGHNHPVVIEAIQQVLADELPLHTLD-LT--------TPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALK 145 (464)
T ss_pred cccCCCCHHHHHHHHHHHHhhhcccccc-cC--------CHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHH
Confidence 4678888777776665531111111100 10 122346777788876432 233445899999999988
Q ss_pred HHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC------------CEEEEEcCCCCCC------------CCHHHHH
Q 001579 667 VIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAKGN------------INIEELR 721 (1050)
Q Consensus 667 air~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G------------~~vv~V~~d~~g~------------iD~e~L~ 721 (1050)
.+|.| . +|++|| +..++||....+..+.| -.+..++.....+ .+++.++
T Consensus 146 lAr~~---t---gr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 219 (464)
T PRK06938 146 LVKTA---T---GRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLE 219 (464)
T ss_pred HHHHh---h---CCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHH
Confidence 88876 2 244555 57789998766544321 1244555432111 2467888
Q ss_pred HHHHcCC---CCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcE
Q 001579 722 KAAEANR---DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADV 786 (1050)
Q Consensus 722 ~~i~~~~---~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv 786 (1050)
+.+++++ +++++|+++.- ...|++. ..++++.++|+++|+++|+|.+ +.||.+.|.+ -+|+
T Consensus 220 ~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV----~tGfGRtG~~~a~e~~gv~PDi 295 (464)
T PRK06938 220 NLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEI----QSGFGRTGKMFAFEHAGIIPDV 295 (464)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc----ccCCCcCcHHHHHHhcCCCCCE
Confidence 8887532 37899888753 3456664 2599999999999999999986 6778787753 3699
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+++ .|.++ +|-| +|.+.+++++ ..+... ...+++.|+++.++++.+.|..+.++
T Consensus 296 v~~--gKglg----gG~P-lsAv~~~~~~-~~~~~~------------------~~~~T~~gnpla~Aaa~a~L~~l~~~ 349 (464)
T PRK06938 296 VVL--SKAIG----GSLP-LAVVVYREWL-DTWQPG------------------AHAGTFRGNQMAMAAGSATLRYIKEH 349 (464)
T ss_pred EEe--ecccc----CCCc-eEEEeehhHh-hccCCC------------------CCCCCCCcCHHHHHHHHHHHHHHHHh
Confidence 887 48763 4434 7777777664 322100 01122456778888889999988777
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccccccc------C--C-CCHHHHHHHHHHCCc
Q 001579 867 GLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNT------A--G-IEPEDVAKRLMDYGF 932 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~------~--g-~~~~~vakrL~d~Gi 932 (1050)
++.+ +.....++|.++|+++ ++++ ..|. |. +. -+.+..-+.. . . .....+.+.|.++|+
T Consensus 350 ~l~~---~~~~~G~~l~~~L~~l~~~~~~i~~VrG~-Gl-m~--gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl 422 (464)
T PRK06938 350 RLAE---HAAAMGERLREHLRQLQRDYPQLGDVRGR-GL-ML--GVEIVDPQGEPDALGHPPANGELASLIQRECLRRGL 422 (464)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHhCCCeeeeecc-ce-EE--EEEeccCcccccccccCCccHHHHHHHHHHHHHCCe
Confidence 6554 3446678888888764 3332 2221 32 21 2222110000 0 0 013467788889999
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 933 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 933 ~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
.+.... +..++||+.|+..+|++|||++++++.+++.++
T Consensus 423 l~~~~g-~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 423 ILELGG-RHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred EEeecC-CCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 874322 124789999999999999999999999998764
No 270
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=2.5e-14 Score=164.67 Aligned_cols=283 Identities=17% Similarity=0.211 Sum_probs=183.9
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~ 714 (1050)
.++++.+++.++.+...+..++|++. +..++++.+. . ++++|++++..|......++..|++++.+++++++.
T Consensus 63 ~~lr~aia~~~~~~~~~I~it~G~~~--al~~~~~~l~-~----~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 135 (353)
T PRK05387 63 DALRQAIAAYYGLDPEQVFVGNGSDE--VLAHAFLAFF-N----HDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFS 135 (353)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHH--HHHHHHHHhc-C----CCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCC
Confidence 47888999999987655555666542 3334444432 2 457899999877666666889999999999988888
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHc-CCEEEEeccccccccccCC-C--CcccCcEEEe
Q 001579 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTS-P--GYIGADVCHL 789 (1050)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~-G~~v~vD~A~~~al~gl~~-p--g~~GaDv~~~ 789 (1050)
+|+++|++ ++++|++++|+ .+|.+. +.+++.++++.+ |+++++|.++.. +.+-.. + ....-.+++.
T Consensus 136 ~d~~~l~~-------~~~~v~~~~P~NPtG~~~-~~~~~~~l~~~~~~~~livDe~y~~-~~~~~~~~~~~~~~~~i~~~ 206 (353)
T PRK05387 136 IDVEDYLR-------PNGGIIFPNPNAPTGIAL-PLAEIERILAANPDSVVVIDEAYVD-FGGESAIPLIDRYPNLLVVQ 206 (353)
T ss_pred CCHHHHHh-------cCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCcEEEEeCcccc-cCCcchHHHHhhCCCEEEEE
Confidence 99999863 23568888994 699987 688888888776 999999998632 222110 1 1123357788
Q ss_pred CCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHH
Q 001579 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1050)
Q Consensus 790 ~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1050)
+++|+|++| |.++|++++++++...+... + ......+.+..++.. +.+++. ..+.++
T Consensus 207 S~SK~~~~~----GlR~G~~~~~~~~~~~l~~~------------~-~~~~~~~~~~~~q~~----~~~~l~--~~~~~~ 263 (353)
T PRK05387 207 TFSKSRSLA----GLRVGFAIGHPELIEALNRV------------K-NSFNSYPLDRLAQAG----AIAAIE--DEAYFE 263 (353)
T ss_pred ehhHhhcch----hhhceeeecCHHHHHHHHHh------------h-ccCCCCCcCHHHHHH----HHHHhc--CHHHHH
Confidence 899998654 78899999887665443100 0 000011111112221 112221 233455
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC-CCCEEEE
Q 001579 870 EASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-VPGTLMI 947 (1050)
Q Consensus 870 ~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~p-v~~~lrI 947 (1050)
+..++..++.+++.+.|++. +.+ ++ +.+.+ +.+.++ +.+..+++++|.++||.+.....+ ..+.+||
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~g~~~-~~-~~~~~---~~~~~~------~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi 332 (353)
T PRK05387 264 ETRAKVIATRERLVEELEALGFEV-LP-SKANF---VFARHP------SHDAAELAAKLRERGIIVRHFNKPRIDQFLRI 332 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeE-CC-CcCcE---EEEECC------CCCHHHHHHHHHHCCEEEEECCCCCCCCeEEE
Confidence 66666777888999999875 332 22 12221 334432 356789999999999987533222 3478999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHH
Q 001579 948 EPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 948 ~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
++. +.+++++++++|++++.
T Consensus 333 s~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 333 TIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred EeC---CHHHHHHHHHHHHHHhh
Confidence 986 57999999999988753
No 271
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.64 E-value=4.6e-14 Score=164.36 Aligned_cols=305 Identities=16% Similarity=0.118 Sum_probs=185.1
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC-C
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K 712 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~-~ 712 (1050)
..++++.+++++|.+.. +..++|++|...++ ++. +..++++||+|...|......+...|++++.+++++ +
T Consensus 31 ~~~le~~la~~~g~~~~-v~~~sgt~al~~~l---~al----~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 31 VPAFEEALAEYVGAKYA-VAFNSATSALHIAC---LAL----GVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDT 102 (380)
T ss_pred HHHHHHHHHHHHCCCeE-EEEcCHHHHHHHHH---HHc----CCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCc
Confidence 45788999999998865 44556766554333 322 123568899998766555555678999999999975 5
Q ss_pred CCCCHHHHHHHHHcCC-CCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccC----cEE
Q 001579 713 GNINIEELRKAAEANR-DNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGA----DVC 787 (1050)
Q Consensus 713 g~iD~e~L~~~i~~~~-~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~Ga----Dv~ 787 (1050)
+.+|+++|++++++++ ++|++|+++++ +|... ++++|+++|+++|+++++|+++..+.. + ....+|. |+.
T Consensus 103 ~~~d~~~l~~~i~~~~~~~t~~v~~~~~--~G~~~-~~~~i~~l~~~~~~~lI~D~a~a~g~~-~-~~~~~g~~~~~d~~ 177 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGKLPKAIVPVDF--AGKSV-DMQAIAALAKKHGLKIIEDASHALGAE-Y-GGKPVGNCRYADAT 177 (380)
T ss_pred CCcCHHHHHHHhhcccCCCceEEEEeCC--CCccC-CHHHHHHHHHHcCCEEEEECCCcccCc-c-CCEeCCCccccceE
Confidence 7899999999997321 47888888765 58776 799999999999999999999864332 2 1122344 999
Q ss_pred EeCCc--cccccCCCCCCCcceeeeec-ccccCCCCC-CccccCCCC---CC-----CCCCCCC-C-CCCcchhhhHHHH
Q 001579 788 HLNLH--KTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI---PA-----PEKSQPL-G-TIAAAPWGSALIL 853 (1050)
Q Consensus 788 ~~~~h--Ktf~~P~g~GGPg~G~i~v~-~~l~~~lpg-~~vg~~~~~---~~-----~~~~~~t-~-~i~sa~~g~~~~~ 853 (1050)
++++| |+++.+ ..|++..+ +++.+.+.. +..|...+. .. +..+... + +..- +...+
T Consensus 178 ~~S~~~~K~~~~~------~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m----~~l~a 247 (380)
T TIGR03588 178 VFSFHPVKIITTA------EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRM----TDIQA 247 (380)
T ss_pred EEecCCCCccccc------CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCc----cHHHH
Confidence 99998 777532 23455554 444332210 000100000 00 0000000 0 0000 11111
Q ss_pred HHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccC--CeeecCCC-CccceeEEEecccccccCCCCHHHHHHHHHHC
Q 001579 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY--PILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1050)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~--~v~~~g~~-g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~ 930 (1050)
+.+.+-+ +.+.+..++..++++++.+.|+++. .+...... ....+.+++.+.. ..+.+.+++.+.|.++
T Consensus 248 a~g~~qL-----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~r~~l~~~L~~~ 319 (380)
T TIGR03588 248 ALGLSQL-----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQ---EFGCTRKEVFEALRAA 319 (380)
T ss_pred HHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECC---cCCCCHHHHHHHHHHC
Confidence 1122222 2356666777789999999998752 22111101 1122334444321 1246789999999999
Q ss_pred CcccCCCCCCC----------------------CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 931 GFHGPTMSWPV----------------------PGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 931 Gi~~~~~~~pv----------------------~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
||.+.....|+ ...|.+......|++|+|+++++|++++
T Consensus 320 gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 320 GIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 99764321121 1457777777889999999999998763
No 272
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=8.8e-14 Score=165.38 Aligned_cols=328 Identities=18% Similarity=0.198 Sum_probs=204.2
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..||++.+++..++..+.... .+.. ..+. .+...++.+.|+++++.+ ...++.++|++++++++..+|.
T Consensus 83 ~~lGh~~p~v~~Ai~~ql~~~-~~~~-~~~~--------~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~ 152 (459)
T PRK06082 83 HQLGYGHPHVIEKVKEQMAKL-PFSP-RRFT--------NETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARH 152 (459)
T ss_pred cccCCCCHHHHHHHHHHHHhC-CCcc-CccC--------CHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHH
Confidence 357888777776665553221 1211 0111 133558889999998633 2346789999999999888887
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCC-----CCC------CHHHHHHHHHc
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAK-----GNI------NIEELRKAAEA 726 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~-----g~i------D~e~L~~~i~~ 726 (1050)
| .| |++|| +..++||....+....|- .+..++.... ... ++++|++.+++
T Consensus 153 ~---tg---r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 226 (459)
T PRK06082 153 I---TG---NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK 226 (459)
T ss_pred h---cC---CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc
Confidence 6 22 34444 678899987554333221 1233432110 011 24668888875
Q ss_pred CCCCEEEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEEEeCCcccc
Q 001579 727 NRDNLSTLMVTYPSTHGVYEEG---IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVCHLNLHKTF 795 (1050)
Q Consensus 727 ~~~~taaV~vt~Pn~~Gv~~~d---i~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~~~~~hKtf 795 (1050)
+ +++++|+++.....|++.++ +++|.++|++||+++++|.+ +.|+.+.|.+ -+|++++ .|.+
T Consensus 227 ~-~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV----~tG~GRtG~~fa~e~~gv~PDiv~~--gKgl 299 (459)
T PRK06082 227 E-GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEI----PNGMGRTGEWFTHQAYGIEPDILCI--GKGL 299 (459)
T ss_pred C-CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEech----hhCCCccchhhHhHhhCCCCCEEEe--cccc
Confidence 4 57888888754333543334 99999999999999999986 4567777643 3688885 5877
Q ss_pred ccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHH
Q 001579 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 875 (1050)
Q Consensus 796 ~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~ 875 (1050)
+ +|+-.+|.+++++++.....+.. . . +++.|+++.++++.+.|..+.++++. ++.
T Consensus 300 ~----gG~~P~~av~~~~~i~~~~~~~~----------------~-~-~T~~gnpl~~aaa~a~L~~l~~~~l~---~~~ 354 (459)
T PRK06082 300 G----GGLVPIAAMITKDKYNTAAQISL----------------G-H-YTHEKSPLGCAAALATIEVIEQEGLL---EKV 354 (459)
T ss_pred c----CCCCcceEEEEcHHHHhhccCCC----------------C-C-CCCCcCHHHHHHHHHHHHHHHhcCHH---HHH
Confidence 4 44323677777776654332110 0 1 12446777778888889888766654 445
Q ss_pred HHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccc-c-cccCC-CCHHHHHHHHHHCCcccCCCCCCCCCEEEE
Q 001579 876 ILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-L-KNTAG-IEPEDVAKRLMDYGFHGPTMSWPVPGTLMI 947 (1050)
Q Consensus 876 ~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~-~-~~~~g-~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI 947 (1050)
.++.++|.++|+++ ++++ ..|. |.. +-+++.. . .+... .....+.+.+.++|+.+.... .+.+++
T Consensus 355 ~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~---~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~---~~~i~~ 427 (459)
T PRK06082 355 KADSQFMRERLLEMKAKYPLIGDVRGI-GLL---WGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQ---GNVIQL 427 (459)
T ss_pred HHHHHHHHHHHHHHHhhCCCeeeeeec-cce---eEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecC---CCEEEE
Confidence 57788999999875 3332 2232 322 1222210 0 00000 013467788889999874322 478999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 948 EPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 948 ~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
+|+..+|++|||++++++.+++.++.+
T Consensus 428 ~Ppl~it~~eid~~~~~l~~~l~~~~~ 454 (459)
T PRK06082 428 SPPLIITREELTQALAILEEAIAKICQ 454 (459)
T ss_pred eCCCccCHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999987643
No 273
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.63 E-value=4.9e-14 Score=166.55 Aligned_cols=372 Identities=15% Similarity=0.137 Sum_probs=217.1
Q ss_pred CCHHHHHHHHHHHhccccCcccccccccccccCcchhhhhcccccccccc----CCCCCchhhcccHHHHHHHHHHHHHH
Q 001579 568 HTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFAN----IHPFAPADQAQGYQEMFNNLGEWLCT 643 (1050)
Q Consensus 568 ~sE~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~----~~P~~p~e~~~G~~~~i~el~~~lae 643 (1050)
+.|.++.+.+-.|.+....++++..+|+-|..+++.....++ .+++.. ...+. ...| ....++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~--~~~~~a~~~~~~~~~---~~~G--~~~~~fe~~lA~ 74 (438)
T PRK15407 2 MTEEELRQQILELVREYAELAHAPKPFVPGKSPIPPSGKVID--AKELQNLVDASLDFW---LTTG--RFNDAFEKKLAE 74 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccccccCCCCCCCcCccCCC--HHHHHHHHHHHHhCc---ccCC--hhHHHHHHHHHH
Confidence 467777777777777665566666666666555443322211 011100 00000 0112 235689999999
Q ss_pred hhCCCeeeeccCchHHHHHHHHHHHHH-HHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC-CCCCCHHHHH
Q 001579 644 ITGFDSFSLQPNAGAAGEYAGLMVIRA-YHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGNINIEELR 721 (1050)
Q Consensus 644 l~G~d~~~l~~~sGa~ge~a~Llair~-y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~-~g~iD~e~L~ 721 (1050)
++|.+.+ +..++|++|...++.++.. +....+.+++++||++...|..........|++++.++++. ++.+|+++++
T Consensus 75 ~~g~~~~-v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le 153 (438)
T PRK15407 75 FLGVRYA-LLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLE 153 (438)
T ss_pred HhCCCeE-EEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHH
Confidence 9999864 5677888776555544321 00011334678999998877666566778999999999874 5889999999
Q ss_pred HHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEecccccccccc-CCCCcccCcEEEeCCccccccCCC
Q 001579 722 KAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHLNLHKTFCIPHG 800 (1050)
Q Consensus 722 ~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl-~~pg~~GaDv~~~~~hKtf~~P~g 800 (1050)
++++ ++|++|+++++ +|... ++++|.++|+++|++|++|+++..+..-- ...|.+| |+.++|+|.+-.++
T Consensus 154 ~~i~---~~tkaVi~~~~--~G~p~-dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~~~fSf~~~k~~~-- 224 (438)
T PRK15407 154 AAVS---PKTKAIMIAHT--LGNPF-DLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DIATLSFYPAHHIT-- 224 (438)
T ss_pred HHcC---cCCeEEEEeCC--CCChh-hHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ceEEEeCCCCCCcc--
Confidence 9997 78999999875 46655 79999999999999999999975433211 1246676 99999887653333
Q ss_pred CCCCcceeeeeccc-ccCCCCC-CccccCC------CC------------CCCCCCC-----CCC-CCCcchhhhHHHHH
Q 001579 801 GGGPGMGPIGVKKH-LAPFLPS-HPVVSTG------GI------------PAPEKSQ-----PLG-TIAAAPWGSALILP 854 (1050)
Q Consensus 801 ~GGPg~G~i~v~~~-l~~~lpg-~~vg~~~------~~------------~~~~~~~-----~t~-~i~sa~~g~~~~~~ 854 (1050)
.|.| |++++++. +...+.- +..|... +. ...+... ..+ |..- +-..++
T Consensus 225 -~geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rm----sel~AA 298 (438)
T PRK15407 225 -MGEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKI----TDMQAA 298 (438)
T ss_pred -ccCc-eEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCc----cHHHHH
Confidence 2344 88888753 3322110 0001000 00 0000000 000 1110 122233
Q ss_pred HHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCC-eeecC-CC--CccceeEEEecccccccCCCCHHHHHHHHHHC
Q 001579 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYP-ILFRG-VN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDY 930 (1050)
Q Consensus 855 ~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~-v~~~g-~~--g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~ 930 (1050)
++..-+.. +.+..++..+++.++.+.|+++.. +..+. +. .+..+.+.+-+.+ ..+.+-+++.+.|.++
T Consensus 299 ig~~qL~~-----l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~Rd~l~~~L~~~ 370 (438)
T PRK15407 299 IGLAQLEK-----LPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKE---DAGFTRVELVKYLEEN 370 (438)
T ss_pred HHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECC---cCCCCHHHHHHHHHHC
Confidence 33333333 445555566788888888876421 21111 11 1233445454431 1245678999999999
Q ss_pred CcccCCCC--------------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 931 GFHGPTMS--------------------WPV-----PGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 931 Gi~~~~~~--------------------~pv-----~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
||...... +|+ ...|.+-.....|++|+++.++++++++.
T Consensus 371 GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 371 KIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 99643111 121 12345544555689999999999998764
No 274
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.63 E-value=3.6e-14 Score=165.22 Aligned_cols=277 Identities=17% Similarity=0.183 Sum_probs=180.0
Q ss_pred HhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEE
Q 001579 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1050)
Q Consensus 205 isqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~ 284 (1050)
..+|..+...++++.+++++|.+. ..++.+|+.++.+++.+. . ++||.|++++..|+++...++. .|++++
T Consensus 72 ~~~g~~~l~~~l~~~l~~~~g~~~--~i~~~sG~~a~~~a~~~~-~--~~gd~vi~~~~~~~~~~~~~~~----~g~~~~ 142 (385)
T TIGR01825 72 TIAGTLRLHEELEEKLAKFKKTEA--ALVFQSGFNTNQGVLSAL-L--RKGDIVLSDELNHASIIDGLRL----TKATKK 142 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCCc--EEEECcHHHHHHHHHHHh-C--CCCCEEEEEccccHHHHHHHHh----cCCceE
Confidence 346777788889999999999753 445666676666544443 2 3789999999999999877653 244443
Q ss_pred E---cCchhhhc-cC----CCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCC---------CCc
Q 001579 285 V---SDLKDIDY-KS----GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP---------PGE 346 (1050)
Q Consensus 285 ~---~~~~~l~~-l~----~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~---------pg~ 346 (1050)
. +|++++++ +. +++++|++..+ |.+|.+.|+++|.++||++|++++++ +..+.+.+.. .-.
T Consensus 143 ~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR01825 143 IYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVD-DAHGSGVMGEAGRGTVHHFGLE 221 (385)
T ss_pred EeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEE-CcccccCcCCCCCccHhhcCCC
Confidence 3 45566654 32 36777776654 77899999999999999999999994 3444432221 112
Q ss_pred ccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhH
Q 001579 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1050)
Q Consensus 347 ~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~ 425 (1050)
.+.||+++|. |.|+.+ + |+++.++++.+.+... ..+ | .-++. ..+..
T Consensus 222 ~~~~i~~~s~sK~~~~~------g-G~~~~~~~~~~~~~~~---------~~~-~-------------~~~~~--~~~~~ 269 (385)
T TIGR01825 222 DKVDIQVGTLSKAIGVV------G-GYAAGHKELIEYLKNR---------ARP-F-------------LFSTA--QPPAV 269 (385)
T ss_pred cCCcEEEEeccHHhhcC------C-CEEecCHHHHHHHHHh---------Ccc-c-------------cccCC--CCHHH
Confidence 5789999997 888532 2 6788777766654100 000 0 00010 01122
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeee
Q 001579 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 502 (1050)
Q Consensus 426 l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~i~~~L~~~GI~~~~~ 502 (1050)
.++..+++ ..+... .++.++..++.+++.+.|+++| +++..+. .+.+.+..+. ..++.+.|.++||.++..
T Consensus 270 ~~a~~~al--~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~ 343 (385)
T TIGR01825 270 VAALAAAV--DELQRS--PELMERLWDNTRFFKAGLGKLG-YDTGGSE-TPITPVVIGDEKAAQEFSRRLFDEGIFAQSI 343 (385)
T ss_pred HHHHHHHH--HHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCCC-CCEEEEEECCHHHHHHHHHHHHHCCcEEccc
Confidence 23333333 222111 2466777888999999999987 8765321 1223333332 568999999999987531
Q ss_pred -------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 503 -------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 503 -------~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
....||++++.++|++||++++++|+.
T Consensus 344 ~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~ 377 (385)
T TIGR01825 344 VFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEK 377 (385)
T ss_pred CCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHH
Confidence 126799999999999999999999963
No 275
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.63 E-value=5.7e-14 Score=164.44 Aligned_cols=296 Identities=17% Similarity=0.177 Sum_probs=181.0
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--ee-eeccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCC
Q 001579 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~d--~~-~l~~~sG-a~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~ 702 (1050)
.+|..++.+.+.+++.+..|.+ .. .+..+.| .+|.+ ++++.+. .++++|++++..++.+...+...|+
T Consensus 72 ~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~---~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 143 (394)
T PRK05942 72 FEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLT---HLALAYV-----NPGDVVLVPSPAYPAHFRGPLIAGA 143 (394)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCC
Confidence 3677677777777777666753 33 2444444 44443 2333331 2457899999877766666788999
Q ss_pred EEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-ccc
Q 001579 703 KIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGL 776 (1050)
Q Consensus 703 ~vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~gl 776 (1050)
+++.++++.+ +.+|+++|+++++ +++++|++++| |.+|.+- +.+++|+++|+++|+++++|.++..-. .+.
T Consensus 144 ~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~ 220 (394)
T PRK05942 144 QIYPIILKPENDWLIDLSSIPEEVA---QQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY 220 (394)
T ss_pred EEEEeecCCccCCccCHHHHHHhcc---ccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC
Confidence 9999999754 4699999999986 68999999998 5789875 248999999999999999999853211 111
Q ss_pred CC------CCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhH
Q 001579 777 TS------PGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1050)
Q Consensus 777 ~~------pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~ 850 (1050)
.. ++..+..+.+.++.|.|+. .|.++|++++++++...+.... .....++++ ..+.
T Consensus 221 ~~~~~~~~~~~~~~~i~~~SfSK~~~~----~GlRiG~i~~~~~l~~~l~~~~------------~~~~~~~~~--~~q~ 282 (394)
T PRK05942 221 QPTSLLEIPGAKDIGVEFHTLSKTYNM----AGWRVGFVVGNRHIIQGLRTLK------------TNLDYGIFS--ALQK 282 (394)
T ss_pred CCCChhhCCCccccEEEEecchhccCC----hhhheeeeecCHHHHHHHHHHH------------hhcccCCCH--HHHH
Confidence 00 1111234667788898854 3677999998877665442100 000011111 1111
Q ss_pred HHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHH-HH
Q 001579 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MD 929 (1050)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL-~d 929 (1050)
++..++. ...+.+++..+....+.+++.+.|++. .+.+..+.+..+ +.++++ .+.+..++++++ .+
T Consensus 283 ----~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f--~~~~~~-----~~~~~~~~~~~~l~~ 349 (394)
T PRK05942 283 ----AAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIPPTKATMY--LWVPCP-----VGMGSTDFALNVLQK 349 (394)
T ss_pred ----HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCCCeeeE--EEEECC-----CCCCHHHHHHHHHHH
Confidence 1122222 234555666666667778888888764 222212222221 345554 235667777765 57
Q ss_pred CCccc-CCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 930 YGFHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 930 ~Gi~~-~~~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
+||.+ +...|. ..+.+||++.. +.++|.++|..+.
T Consensus 350 ~gV~v~~g~~f~~~~~~~iRis~~~-----~~~~l~~~l~~l~ 387 (394)
T PRK05942 350 TGVVVTPGNAFGEGGEGYVRISLIA-----DCDRLGEALDRLK 387 (394)
T ss_pred CCEEEeCChhhCcCCCCeEEEEecC-----CHHHHHHHHHHHH
Confidence 89986 333342 24789999952 3567777776654
No 276
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.63 E-value=2.2e-14 Score=165.79 Aligned_cols=301 Identities=12% Similarity=0.066 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHHhhCCCe---eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH-HHHh---CCCE
Q 001579 631 QEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA-TAAM---CGMK 703 (1050)
Q Consensus 631 ~~~i~el~~~lael~G~d~---~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa-~a~~---~G~~ 703 (1050)
.+.+++.++.+++++|.+. +.|.+++|+.+.++++..+- . + +..++....||+.-. .+.+ .+ +
T Consensus 40 ~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~---~-----~-~~l~i~~G~~~~~~~~~a~~~~~~~-~ 109 (361)
T TIGR01366 40 KNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI---E-----K-KSLHLSFGEFSSKFAKAVKLAPWLG-E 109 (361)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc---c-----c-cccEEecCHHHHHHHHHHHhhhccC-C
Confidence 4678899999999999842 34556777777655544331 0 1 223344444543322 2333 34 7
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc
Q 001579 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1050)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~ 782 (1050)
+..+++++...++. .++ +++++|.+++- |.+|++. |+++| +|++|++++||+++..+...+ ...
T Consensus 110 ~~~~~~~~~~~~~~-----~~~---~~~~lV~~~h~et~tG~~~-pi~~I---~~~~g~~~iVDavqs~g~~~i-dv~-- 174 (361)
T TIGR01366 110 PIIVTADPGSAPEP-----QAD---PGVDVIAWAHNETSTGVAV-PVRRP---EGSDDALVVIDATSGAGGLPV-DIA-- 174 (361)
T ss_pred ceEEecCCCCCCCC-----ccC---CCCCEEEEcccCCccceec-ccccc---cccCCCeEEEEcCccccCCCC-CHH--
Confidence 77777765444443 233 68899988875 5689998 79887 589999999999865333222 112
Q ss_pred cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCcccc-----CCCC---CCCCCCCCCCCCCcchhhhHHHHH
Q 001579 783 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVS-----TGGI---PAPEKSQPLGTIAAAPWGSALILP 854 (1050)
Q Consensus 783 GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~-----~~~~---~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1050)
.+|+++++.||+|+.| ||++++++++++.+.+.....+. ..+. .....+..+.++.+ . ..+.
T Consensus 175 ~~D~~~~s~~K~lg~~-----~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~----i-~~i~ 244 (361)
T TIGR01366 175 ETDVYYFAPQKNFASD-----GGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPA----I-ATLA 244 (361)
T ss_pred HCCEEEEEchhhcCCC-----CceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCch----H-HHHH
Confidence 3899999999998533 36888888886554443111110 0000 00001122333321 1 1111
Q ss_pred HHHHHHHHHChh-hHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCC
Q 001579 855 ISYTYIAMMGSK-GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYG 931 (1050)
Q Consensus 855 ~a~a~l~~lG~e-Gl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~G 931 (1050)
...+.+..+.++ |+....++...+++++.++|++. ++++..++........++.+. .+++.+++.++|.++|
T Consensus 245 ~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~-----~g~~~~~v~~~L~~~g 319 (361)
T TIGR01366 245 LLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFV-----DDIDAATVAKILRANG 319 (361)
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECC-----CccCHHHHHHHHHHCC
Confidence 223334445445 57777788889999999999886 233222211111011234442 3678899999999999
Q ss_pred cccCCCCCCC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 932 FHGPTMSWPV-PGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 932 i~~~~~~~pv-~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
|.+......+ .+.+||+...++|.+|||+|+++|++++++
T Consensus 320 I~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 320 IVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred CeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 9864221122 357999999999999999999999998765
No 277
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.63 E-value=3.5e-14 Score=172.78 Aligned_cols=308 Identities=11% Similarity=0.081 Sum_probs=195.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-HHhCCCEEEEEcCCCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGMKIVSVGTDAK 712 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~-a~~~G~~vv~V~~d~~ 712 (1050)
+.|.|+..++++|.+...+..|+++.|+.++++++- .++++||++.+.|-+.... ..+.|++.+.+....+
T Consensus 176 i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~--------~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n 247 (720)
T PRK13578 176 AKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALL--------TPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARN 247 (720)
T ss_pred HHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHHcCCeEEEeecccc
Confidence 779999999999999988889999989887777643 2568999999999887775 7899999999875432
Q ss_pred -----CCCCHHH-----HHHHHHcCCCC-------EEEEEEEcCCCccccccCHHHHHHH-HHHcCCEEEEecccccccc
Q 001579 713 -----GNINIEE-----LRKAAEANRDN-------LSTLMVTYPSTHGVYEEGIDEICKI-IHDNGGQVYMDGANMNAQV 774 (1050)
Q Consensus 713 -----g~iD~e~-----L~~~i~~~~~~-------taaV~vt~Pn~~Gv~~~di~eI~~l-a~~~G~~v~vD~A~~~al~ 774 (1050)
|.++.+. ++++|+++.++ .+++++|+|++.|++. |+++|.++ +|.++ .++||.|+.. ..
T Consensus 248 ~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~y-di~~I~~~~~h~~~-~llvDEAhga-h~ 324 (720)
T PRK13578 248 PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIY-NARQVVDKIGHLCD-YILFDSAWVG-YE 324 (720)
T ss_pred ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceee-cHHHHHHHhhccCC-cEEEeCcchh-hh
Confidence 4567555 99999876322 6899999999999998 89999998 68888 9999998642 22
Q ss_pred ccCC-----C---CcccCc----EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCC-CCC
Q 001579 775 GLTS-----P---GYIGAD----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP-LGT 841 (1050)
Q Consensus 775 gl~~-----p---g~~GaD----v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~-t~~ 841 (1050)
.|.. | .+.|+| +++-|.||+++. --..+.|-++...+..- .+.+.. + +-..... ...
T Consensus 325 ~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-----lTQaS~LHvk~~~i~g~-~~~v~~--~--r~~~al~m~qS 394 (720)
T PRK13578 325 QFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-----FSQTSQIHKKDNHIKGQ-ARYCPH--K--RLNNAFMLHAS 394 (720)
T ss_pred ccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-----hhhHhhhhcCCcccccc-cccCCH--H--HHHHHHHHHcC
Confidence 2221 2 457999 999999999852 12334555544321100 000000 0 0000000 011
Q ss_pred CCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHH-hcc--CCeeec-----------------------
Q 001579 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL-EKH--YPILFR----------------------- 895 (1050)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L-~~~--~~v~~~----------------------- 895 (1050)
+| ..|.....+-.|.+++. +..| ++..+..+..+..++++| +.. +++..+
T Consensus 395 TS-PsY~LmASLDva~~~m~--~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w 470 (720)
T PRK13578 395 TS-PFYPLFAALDVNAKMHE--GESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFF 470 (720)
T ss_pred CC-hHHHHHHHHHHHHHHHH--HhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhccccccc
Confidence 11 12222222233333333 2233 234455666677777777 332 333210
Q ss_pred ----CCC--------------CccceeEEEeccccc------ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCC
Q 001579 896 ----GVN--------------GTVAHEFIVDLRGLK------NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTE 951 (1050)
Q Consensus 896 ----g~~--------------g~~~~e~i~~~~~~~------~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te 951 (1050)
+.. +|. -+++.++.+. .+.|+++..+++.|.++||.+-... ...+.+-+|.
T Consensus 471 ~~~p~~~whgf~~~~~~~~~lDP~--KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d---~~~vL~l~s~ 545 (720)
T PRK13578 471 SFEPGEKWHGFEGYAEDQYFVDPC--KLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCD---LNSILFLLTP 545 (720)
T ss_pred ccccCccccccccccccccccCCc--eEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecC---CCeEEEEeCC
Confidence 000 111 1223333221 1235568999999998899875433 3678888888
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 001579 952 SESKEELDRYCDALISIREE 971 (1050)
Q Consensus 952 ~~t~eeid~fv~aL~~i~~e 971 (1050)
..|++++++++++|.++.+.
T Consensus 546 g~t~~~~~~Lv~aL~~f~~~ 565 (720)
T PRK13578 546 AEDMAKLQQLVAMLARFEKH 565 (720)
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999988543
No 278
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=2e-14 Score=165.80 Aligned_cols=281 Identities=14% Similarity=0.112 Sum_probs=176.8
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCC-CEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHR-NVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r-~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g 713 (1050)
.++++.+++.+|++..++..+.|++. +..++++.+. . ++ ++|+++...+..+...+++.|++++.+++++++
T Consensus 63 ~~Lr~aia~~~~~~~~~I~it~Gs~~--~i~~~~~~~~-~----~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~ 135 (354)
T PRK04635 63 PELINAYSAYAGVAPEQILTSRGADE--AIELLIRAFC-E----PGQDSIACFGPTYGMYAISAETFNVGVKALPLTADY 135 (354)
T ss_pred HHHHHHHHHHhCcCHHHEEEeCCHHH--HHHHHHHHhc-C----CCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCC
Confidence 46788899999998766666666542 2333344432 1 33 789998876555555578899999999998778
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHc-CCEEEEeccccccccccCCCCcc---cCc-EE
Q 001579 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN-GGQVYMDGANMNAQVGLTSPGYI---GAD-VC 787 (1050)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~-G~~v~vD~A~~~al~gl~~pg~~---GaD-v~ 787 (1050)
.+|++.++ ++ +++++|++++| |.+|.+. +.+++.++++.. ++++++|+++.. +........+ ... ++
T Consensus 136 ~~~~~~l~-~~----~~~~li~i~nP~NPTG~~~-~~~~l~~l~~~~~~~~vivDeay~~-~~~~~s~~~~~~~~~~~iv 208 (354)
T PRK04635 136 QLPLDYIE-QL----DGAKLVFICNPNNPTGTVI-DRADIEQLIEMTPDAIVVVDEAYIE-FCPEYSVADLLASYPNLVV 208 (354)
T ss_pred CCCHHHHH-hc----cCCCEEEEeCCCCCCCccC-CHHHHHHHHHhCCCcEEEEeCchHh-hccCcchHHHHhhCCCEEE
Confidence 89999987 33 57889999999 5799987 688888888763 689999998632 1110010011 111 45
Q ss_pred EeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 788 ~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
+.+++|+|+. .|.++|++++++++.+.+... ....++++ ....++.+++...|.+-
T Consensus 209 ~~S~SK~~~l----~GlRlG~~i~~~~~~~~l~~~--------------~~~~~~~~------~~~~~a~~~l~~~~~~~ 264 (354)
T PRK04635 209 LRTLSKAFAL----AGARCGFTLANEELIEILMRV--------------IAPYPVPL------PVSEIATQALSEAGLAR 264 (354)
T ss_pred EechHHHhhh----hHHHHhhhhCCHHHHHHHHhh--------------cCCCCCCH------HHHHHHHHHHhcccHHH
Confidence 6778998854 367899999987766543210 00001111 11112233333222233
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CCCCCEEE
Q 001579 868 LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLM 946 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~-~pv~~~lr 946 (1050)
+++..+....+.+++.+.|+++..+.+..+.+.+ ++++++ +..++.+.|.++||.+.... +..++.+|
T Consensus 265 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f---~~~~~~--------~~~~~~~~l~~~gv~v~~~~~~~~~~~lR 333 (354)
T PRK04635 265 MKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNY---VLAKFD--------DVDAVFKALWDAGIVARAYKDPRLANCIR 333 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcE---EEEECC--------CHHHHHHHHHHCCEEEEECCCCCCCCeEE
Confidence 4444445556678888999875212111222322 344442 35688889999999875432 22457899
Q ss_pred EEcCCCCCHHHHHHHHHHHHH
Q 001579 947 IEPTESESKEELDRYCDALIS 967 (1050)
Q Consensus 947 I~~te~~t~eeid~fv~aL~~ 967 (1050)
|++ .+.+|+++|+++|++
T Consensus 334 is~---~~~e~~~~l~~al~~ 351 (354)
T PRK04635 334 FSF---SNRAETDKLIGLIRN 351 (354)
T ss_pred EEe---CCHHHHHHHHHHHHH
Confidence 997 478999999999975
No 279
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.63 E-value=1.7e-13 Score=164.36 Aligned_cols=293 Identities=13% Similarity=0.075 Sum_probs=179.7
Q ss_pred hhhHHHHHHHHHHHHHHhcCC-------------CCcceeEecchHHHHHHHH-HHhhhhcC------------------
Q 001579 206 AQGRLESLLNFQTMIADLTGL-------------PMSNASLLDEGTAAAEAMA-MCNNIQKG------------------ 253 (1050)
Q Consensus 206 sqG~le~l~e~q~~ia~L~G~-------------~~anasl~d~~Taa~eA~~-la~~~~~~------------------ 253 (1050)
|....+...+.-.|+++|++. +.+...+++|||.+.-..+ .|+.....
T Consensus 124 spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~ 203 (522)
T TIGR03799 124 SKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALK 203 (522)
T ss_pred CcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhh
Confidence 444444555566788888752 1234567888886544333 34332100
Q ss_pred ----CCCEEEEcCCCChhHHHHHHHhccCCCe---EEEEcCc--------hhhhc-cC----CCeeEE--EEEcC-CCCe
Q 001579 254 ----KKKTFIIASNCHPQTIDICITRADGFDI---KVVVSDL--------KDIDY-KS----GDVCGV--LVQYP-GTEG 310 (1050)
Q Consensus 254 ----~gd~Vlvs~~~Hps~~~~~~~~a~~~gi---~v~~~~~--------~~l~~-l~----~~t~~V--~v~~p-n~~G 310 (1050)
++..|++++..|.|+.+.++.+ |+ +++.++. ++|++ +. .+++.+ +.+.. +.+|
T Consensus 204 ~~~~~~~~v~~S~~~H~S~~kaa~~l----glg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tG 279 (522)
T TIGR03799 204 HYGYDGLAILVSERGHYSLGKAADVL----GIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETG 279 (522)
T ss_pred hccCCceEEEECCCchHHHHHHHHHc----CCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCC
Confidence 2357999999999998876542 44 4555543 34554 42 344333 33444 4699
Q ss_pred eEccHHHHHHHHHhCCcEEEEEecCccccCCCCC------Cc-ccceEEEecC-ccccccCCCCCcceEEEEEeh-hhhh
Q 001579 311 EVLDYGDFIKNAHANGVKVVMATDLLALTILKPP------GE-LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQ-EYKR 381 (1050)
Q Consensus 311 ~i~di~~I~~~ah~~galliV~a~~~alg~l~~p------g~-~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~-~~~r 381 (1050)
.++|+++|+++|+++|++++|++ .++.+.+..+ .. .+||.++.++ |++++|++ +|++++++ ++.+
T Consensus 280 aiDpl~eIa~i~~~~g~~lHVDa-A~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g-----~G~llvr~~~~~~ 353 (522)
T TIGR03799 280 NIDPLDEMADIAQELGCHFHVDA-AWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMG-----AGMVLFKDPALMS 353 (522)
T ss_pred CcCCHHHHHHHHHHcCCeEEEEc-hhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcc-----cEEEEEeCHHHHH
Confidence 99999999999999999999954 2232222222 12 3899999999 65777764 57888875 4445
Q ss_pred cCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHH
Q 001579 382 MMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGL 461 (1050)
Q Consensus 382 ~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L 461 (1050)
.+... ...-.. .|...+ .+.+.|-++++. + +.+.++ +.++|.+|++++.++..++++++.+.|
T Consensus 354 ~~~~~-~~Yl~~-~~~~d~--------~~~~legsR~~~----a-l~lw~a--L~~lG~~G~~~ii~~~~~la~~l~~~L 416 (522)
T TIGR03799 354 AIEHH-AEYILR-KGSKDL--------GSHTLEGSRPGM----A-MLVYAG--LHIIGRKGYELLIDQSIEKAKYFADLI 416 (522)
T ss_pred HhccC-cchhcC-CCCCcc--------ccceeecCcchH----H-HHHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 44321 000000 000000 011223222222 2 123333 478899999999999999999999999
Q ss_pred hcCCCEEEcCCCCccEEEEecC-C------------------------HHHHHHHHHHcCce-eeee--c----C----C
Q 001579 462 KKLGTVEVQGLPFFDTVKVKCA-D------------------------AHAIASAAYKIEMN-LRVV--D----S----N 505 (1050)
Q Consensus 462 ~~~G~~~l~~~~~~~~v~i~~~-~------------------------~~~i~~~L~~~GI~-~~~~--~----~----~ 505 (1050)
++..+++++.++.++.|+|+.. . ...|.+++.+.|.. +... . . -
T Consensus 417 ~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~ 496 (522)
T TIGR03799 417 QQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTV 496 (522)
T ss_pred hhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcE
Confidence 9985599998777777777631 0 23566666667764 3321 1 1 2
Q ss_pred eEEEEe-ccCCCHHHHHHHHH
Q 001579 506 TVTASF-DETTTLEDVDKLFI 525 (1050)
Q Consensus 506 ~lris~-~e~~t~edId~lv~ 525 (1050)
.+|+++ ...+|.+||+.+++
T Consensus 497 ~lR~~~~np~tt~~~i~~~l~ 517 (522)
T TIGR03799 497 VFRVVLANPLTTHEILQDILD 517 (522)
T ss_pred EEEEEecCCCCCHHHHHHHHH
Confidence 489988 56688999998765
No 280
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.63 E-value=3.6e-14 Score=163.82 Aligned_cols=282 Identities=14% Similarity=0.126 Sum_probs=178.8
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g 713 (1050)
..++++.+++.+|.+...+..++|++. +..++++.+. .++++|++++..++.....+...|.+++.++++ ++
T Consensus 66 ~~~lr~~ia~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~ 137 (359)
T PRK03158 66 APELRTKVAKHLGVDEEQLLFGAGLDE--VIQMISRALL-----NPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DG 137 (359)
T ss_pred HHHHHHHHHHHhCCCHHHEEECCCHHH--HHHHHHHHHh-----CCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CC
Confidence 346778888888887655555556542 2223344332 145789998875544445577889999999997 67
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHH--cCCEEEEeccccccc-ccc-CCC----CcccC
Q 001579 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQ-VGL-TSP----GYIGA 784 (1050)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~--~G~~v~vD~A~~~al-~gl-~~p----g~~Ga 784 (1050)
.+|+++++++++ ++++++++++| |.+|.+. +.++|.++++. +|+++++|.++..-. .+. ..+ ...+-
T Consensus 138 ~~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~-~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 213 (359)
T PRK03158 138 GHDLEAMLKAID---EQTKIVWICNPNNPTGTYV-NHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYEN 213 (359)
T ss_pred CcCHHHHHHhcC---CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCC
Confidence 799999999886 68889999999 5799987 67888888877 599999999863211 111 011 11234
Q ss_pred cEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
.+++.++.|+|+.| |.++|++++++++...+... ..+.+++ ..++ .++++++. .
T Consensus 214 vi~~~S~SK~~g~~----GlRiG~~v~~~~~~~~~~~~--------------~~~~~~~--~~~q----~~~~~~l~--~ 267 (359)
T PRK03158 214 LIVLRTFSKAYGLA----ALRVGYGIASEELIEKLNIA--------------RPPFNTT--RIAQ----YAAIAALE--D 267 (359)
T ss_pred EEEEEechHhhcCc----chhhehhcCCHHHHHHHHHh--------------cCCCCCC--HHHH----HHHHHHhc--C
Confidence 46777888988543 67789999887665543110 0011111 1122 22333332 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCCCC
Q 001579 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVP 942 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~-~~~pv~ 942 (1050)
.+-+++..+....+.+++.+.|++. +.+ ++ +.+.+ +.+++. .+..++.++|.++|+.+.. ..|..+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~~g~~---i~~~~~-------~~~~~~~~~l~~~gv~v~~g~~f~~~ 335 (359)
T PRK03158 268 QAFLKECVEKNAEGLEQYYAFCKEYGLFY-YP-SQTNF---IFVDTG-------RDANELFEALLKKGYIVRSGAALGFP 335 (359)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCee-CC-CcCcE---EEEECC-------CCHHHHHHHHHHCCeEEeeCCCCCCC
Confidence 2223444444456667777888765 222 22 22321 334432 3568999999999998643 234346
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 943 GTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 943 ~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
+.+||++. +.+|+|+|+++|+++
T Consensus 336 ~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 336 TGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred CeEEEecC---CHHHHHHHHHHHHHh
Confidence 88999975 789999999999876
No 281
>PLN00144 acetylornithine transaminase
Probab=99.63 E-value=1.3e-13 Score=160.65 Aligned_cols=317 Identities=18% Similarity=0.257 Sum_probs=201.2
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
..+|++.+++..++..+......+.. .+. .+...++.+.|+++++.+.+ ++.+||++++++++..+|.|
T Consensus 27 ~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~--------~~~~~~la~~l~~~~~~~~v-~f~~sGseA~e~AlklAr~~ 95 (382)
T PLN00144 27 NALGHGDPDWVKAVAEQAGTLAHVSN--VYH--------TIPQVELAKRLVASSFADRV-FFCNSGTEANEAAIKFARKY 95 (382)
T ss_pred ccCCCCCHHHHHHHHHHHHhcCCccc--ccc--------CHHHHHHHHHHHhcCCCCeE-EEeCCcHHHHHHHHHHHHHH
Confidence 46788887777766665322111111 111 12244788888888876654 67789999999999999988
Q ss_pred HHhcCCCC-------CCEEE-EcCCCCCccHHHHHhCCC------------EEEEEcCCCCCCCCHHHHHHHHHcCCCCE
Q 001579 672 HKARGDHH-------RNVCI-IPVSAHGTNPATAAMCGM------------KIVSVGTDAKGNINIEELRKAAEANRDNL 731 (1050)
Q Consensus 672 ~~~~G~~~-------r~~Vl-ip~saHgt~pa~a~~~G~------------~vv~V~~d~~g~iD~e~L~~~i~~~~~~t 731 (1050)
...+|..+ |.+|| +..++||....+....+- .++.++. .|+++|++.+. .+++
T Consensus 96 ~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~--~~~~ 168 (382)
T PLN00144 96 QRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-----GNLEAARKLIQ--KGKT 168 (382)
T ss_pred HhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC-----CCHHHHHHhcC--CCCe
Confidence 65443221 34555 577899988766443221 1333443 37999998885 3578
Q ss_pred EEEEEEcC-CCccccc-cC--HHHHHHHHHHcCCEEEEeccccccccccCCCCc--------ccCcEEEeCCccccccCC
Q 001579 732 STLMVTYP-STHGVYE-EG--IDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLNLHKTFCIPH 799 (1050)
Q Consensus 732 aaV~vt~P-n~~Gv~~-~d--i~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~--------~GaDv~~~~~hKtf~~P~ 799 (1050)
++|+++.- +..|++. +. +++|.++|++||+++|+|.++ .++.+.|. ..+|++++ .|+++
T Consensus 169 aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~----tg~gr~g~~~~~~~~~~~PDi~t~--sK~l~--- 239 (382)
T PLN00144 169 AAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQ----CGLGRTGYLWAHEAYGVEPDIMTL--AKPLA--- 239 (382)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh----hCCCccchHhhhhhcCCCCCEEEe--ccccc---
Confidence 88877632 3445553 34 999999999999999999874 44443331 24687766 58884
Q ss_pred CCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHH
Q 001579 800 GGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNA 879 (1050)
Q Consensus 800 g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a 879 (1050)
||-.+|++++++++.+.+.... + .+++.++++.++++.+.|..+..+++.+.. ....
T Consensus 240 --~G~pig~v~~~~~~~~~~~~~~---------~---------~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~---~~~g 296 (382)
T PLN00144 240 --GGLPIGAVLVTEKVASAINPGD---------H---------GSTFAGGPLVCNAALAVLDKISKPGFLASV---AKKG 296 (382)
T ss_pred --CCcceEEEEEcHHHHhccCCCC---------C---------CCCCCCCHHHHHHHHHHHHHHhhchHHHHH---HHHH
Confidence 3455889999888776552110 0 011234556667777778877655554433 3455
Q ss_pred HHHHHHHhcc---CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCC
Q 001579 880 NYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESES 954 (1050)
Q Consensus 880 ~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t 954 (1050)
+++.+.|++. ++.. ..| .|.. +.+.+. .+...+.+++.++|+.+..... .+.||++|+...+
T Consensus 297 ~~l~~~l~~~~~~~~~~~~vrg-~G~~---~~l~l~-------~~~~~~~~~~~~~Gv~i~~~~~--~~~lrl~p~~~~~ 363 (382)
T PLN00144 297 EYLRELLRRKLGGNPHVKEVRG-VGLL---VGIQLD-------VPAGPLVDACRDSGLLVLTAGK--GDVVRLVPPLVIS 363 (382)
T ss_pred HHHHHHHHHHHhhCCCceeeec-CceE---EEEEec-------CccHHHHHHHHHCCeEEeecCC--CCEEEEeCCCccC
Confidence 6666666553 2221 122 2322 233332 2346899999999998753321 3789999999889
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001579 955 KEELDRYCDALISIREE 971 (1050)
Q Consensus 955 ~eeid~fv~aL~~i~~e 971 (1050)
++|||.+++.|.+++.+
T Consensus 364 ~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 364 EAELEQAVEILADCLPA 380 (382)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988764
No 282
>PRK09105 putative aminotransferase; Provisional
Probab=99.63 E-value=5.3e-14 Score=163.29 Aligned_cols=280 Identities=15% Similarity=0.191 Sum_probs=181.6
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g 713 (1050)
..++++.+++.+|.+...+..+.|++. +..++++.+. .++++|++++..|+.+...+++.|.+++.++.++++
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~--ai~~~~~~l~-----~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSE--PLNYAVLAFT-----SPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADG 152 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHH--HHHHHHHHHc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCC
Confidence 457888899999988766655556542 3334444442 245789999987777777788999999999998888
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHH--cCCEEEEeccccccccccCCCC---cccCcEE
Q 001579 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG---YIGADVC 787 (1050)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~--~G~~v~vD~A~~~al~gl~~pg---~~GaDv~ 787 (1050)
.+|++++++. . +++++|++++| |.+|.+. +.++|.++++. +|+++++|+++.. +....... +.+.+++
T Consensus 153 ~~d~~~l~~~-~---~~~~~v~l~nP~NPTG~~~-~~~~l~~l~~~~~~~~~lIvDEaY~~-f~~~~s~~~~~~~~~~vi 226 (370)
T PRK09105 153 AHDVKAMLAA-D---PNAGLIYICNPNNPTGTVT-PRADIEWLLANKPAGSVLLVDEAYIH-FSDAPSVVDLVAQRKDLI 226 (370)
T ss_pred CCCHHHHHhc-C---CCCCEEEEeCCCCCCCcCc-CHHHHHHHHHhCCCCcEEEEECchHH-hccCcchHHHHhhCCCEE
Confidence 8999999876 3 56888999999 4799886 56666666543 5899999998631 22111111 1234554
Q ss_pred -EeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 788 -HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 788 -~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
..+++|+|++| |.++|++++++++.+.+-. .....++ .. ...++.+++. .++
T Consensus 227 ~~~SfSK~~g~~----GlRiG~~v~~~~~i~~l~~---------------~~~~~~~-----~~-~~~aa~~~L~--~~~ 279 (370)
T PRK09105 227 VLRTFSKLYGMA----GMRLGLAAARPDLLAKLAR---------------FGHNPLP-----VP-AAAAGLASLR--DPK 279 (370)
T ss_pred EEecccHhhcCC----ccceeeeecCHHHHHHHHh---------------cCCCCcC-----HH-HHHHHHHHHh--CHH
Confidence 45778888644 6789999988766554310 0001111 11 1111222222 233
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCC-CCCE
Q 001579 867 GLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-VPGT 944 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~p-v~~~ 944 (1050)
-+++..+...++.+++.+.|++. +++. + +.+.+ ++++++ .+..+++++|.++||.++. .|+ .+++
T Consensus 280 ~~~~~~~~~~~~r~~l~~~L~~~g~~~~-~-~~~~f---~~~~~~-------~~~~~l~~~L~~~gI~v~~-~~~~~~~~ 346 (370)
T PRK09105 280 LVPQRRAENAAVREDTIAWLKKKGYKCT-P-SQANC---FMVDVK-------RPAKAVADAMAKQGVFIGR-SWPIWPNW 346 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCcC-C-CCCcE---EEEeCC-------CCHHHHHHHHHHCCcEEec-CCCCCCCe
Confidence 34445556667788898999875 4332 1 22322 334442 3567899999999998843 233 3589
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 945 LMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 945 lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
+||++. +.+++++|+++|.+++
T Consensus 347 ~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 347 VRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred EEEEcC---CHHHHHHHHHHHHHHh
Confidence 999986 5789999999998765
No 283
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.63 E-value=4.4e-14 Score=165.51 Aligned_cols=274 Identities=16% Similarity=0.164 Sum_probs=184.2
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 290 (1050)
.++++.+|++.|.+ ++.++.+|++++.+++++. .. +||+|+++...|+.+...+...++..|++++.+|. ++
T Consensus 67 ~~Le~~iA~~~g~~--~~l~~~sG~~Ai~~al~~l-l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 141 (400)
T PRK06234 67 TEVENKLALLEGGE--AAVVAASGMGAISSSLWSA-LK--AGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEE 141 (400)
T ss_pred HHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHH-hC--CCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHH
Confidence 35778999999976 3778899998877766554 23 89999999999999988876666778999999875 45
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhC--CcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~--galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~ 365 (1050)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++ |++++|+ +..+.+....|.++|+||+++|. |.|++|
T Consensus 142 l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livD-ea~~~~~~~~~l~~g~Divv~S~sK~l~g~--- 217 (400)
T PRK06234 142 VRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVD-NTFCTPYIQRPLQLGADVVVHSATKYLNGH--- 217 (400)
T ss_pred HHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEE-CCCCchhcCCchhhCCcEEEeeccccccCC---
Confidence 555 7788999999998 7899999999999999997 8999994 45555555567788999999998 877532
Q ss_pred CCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001579 366 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1050)
Q Consensus 366 GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1050)
|...+|++++++++.+++- ..+ ++..-+ . +.+++ .+. +...|-+-+..
T Consensus 218 g~~~gG~v~~~~~~~~~l~--~~~----------------------~~~~~g-~--~l~p~---~a~--l~~~~l~tl~~ 265 (400)
T PRK06234 218 GDVIAGFVVGKEEFINQVK--LFG----------------------IKDMTG-S--VIGPF---EAF--LIIRGMKTLQI 265 (400)
T ss_pred CCceeEEEEecHHHHHHHH--HHH----------------------HHHhcC-C--CCCHH---HHH--HHHhccCcHHH
Confidence 2233689999887765541 000 000000 0 01122 221 23444455567
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CccEEEEecCC----HHHHHHHHHHcCc--eee--
Q 001579 446 IAQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD----AHAIASAAYKIEM--NLR-- 500 (1050)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~-l~~~-----~-----------~~~~v~i~~~~----~~~i~~~L~~~GI--~~~-- 500 (1050)
+.++..+++.++++.|++...+. +..+ + +..-|+|.+++ +..+.+.|.-.++ .+.
T Consensus 266 r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~ 345 (400)
T PRK06234 266 RMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDA 345 (400)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCC
Confidence 77888899999999999875343 3211 1 11247777753 4456666654333 110
Q ss_pred --e---------------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 501 --V---------------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 501 --~---------------------~~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
. +.++.||+|++--+.++=|+.|.++|.
T Consensus 346 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~ 396 (400)
T PRK06234 346 ETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALD 396 (400)
T ss_pred CceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHH
Confidence 0 124679999887654444455555553
No 284
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.63 E-value=1e-13 Score=163.54 Aligned_cols=303 Identities=17% Similarity=0.186 Sum_probs=182.2
Q ss_pred CcHHHHHHHHhCCCcccccCCChhHHh-hhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEE
Q 001579 180 VPPVILRNIMENPAWYTQYTPYQAEIA-QGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (1050)
Q Consensus 180 ~p~~i~~~i~~~~~~~t~ytpyq~eis-qG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~V 258 (1050)
+|..+.+.+.+ ++..|++....+. ..+-+.+..+++.+|+|+|.+. +.+++++++++.+++.++ . +|++|
T Consensus 93 l~~~vieAv~~---~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~~l--~--~GdeV 163 (454)
T TIGR00474 93 LAEEAIEAVTD---AARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED--ALVVNNNAAAVLLALNTL--A--KGKEV 163 (454)
T ss_pred CCHHHHHHHHH---HHhcccchhccccccccchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh--C--CcCEE
Confidence 56666556654 4444542111121 1123456778899999999987 567888887765554332 2 78999
Q ss_pred EEcCCCChhHH---HHHHHhccCCCeEEEEcCc------hhhhc-cCCCeeEEEEEcC-CC--Ce--eEccHHHHHHHHH
Q 001579 259 IIASNCHPQTI---DICITRADGFDIKVVVSDL------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKNAH 323 (1050)
Q Consensus 259 lvs~~~Hps~~---~~~~~~a~~~gi~v~~~~~------~~l~~-l~~~t~~V~v~~p-n~--~G--~i~di~~I~~~ah 323 (1050)
|+++.+|+++- ... ..++..|+++++++. +++++ ++++|++|++.++ |+ .| .+.|+++|+++||
T Consensus 164 Ivs~~e~v~~ggs~~i~-~~~~~~G~~~~~v~~~~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~ 242 (454)
T TIGR00474 164 IVSRGELVEIGGSFRIP-DVMEQSGAKLVEVGTTNRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGR 242 (454)
T ss_pred EECCChhhhhcchhhHH-HHHHHcCCEEEEeCCCCCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHH
Confidence 99999986431 111 123457999998864 45666 8889999988765 44 46 5789999999999
Q ss_pred hCCcEEEEEecCcc------ccC-----CCCCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEe
Q 001579 324 ANGVKVVMATDLLA------LTI-----LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVS 391 (1050)
Q Consensus 324 ~~galliV~a~~~a------lg~-----l~~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s 391 (1050)
++|++++|+.-.-. +++ +..+.++|||++++|+ |+| |||++|++++++++++++...-++
T Consensus 243 ~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~~~~l~-- 314 (454)
T TIGR00474 243 EHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLKKNPLT-- 314 (454)
T ss_pred HcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhhhchhH--
Confidence 99999999531000 111 1234578999999999 655 567789999999888766321100
Q ss_pred ecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH--HH----HHhCcccHHHHH---HHHHHHHHHHHHHHh
Q 001579 392 IDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM--YA----VYHGPEGLKTIA---QRVHGLAGTFALGLK 462 (1050)
Q Consensus 392 ~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~--y~----~~~g~~Gl~~ia---~~~~~~a~~l~~~L~ 462 (1050)
+++ |-.|- .+.++.+.+ |+ ++..-.|++.+. ++..++|..+++.|+
T Consensus 315 ------r~l-----------r~~k~--------~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~ 369 (454)
T TIGR00474 315 ------RAL-----------RVDKL--------TLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLK 369 (454)
T ss_pred ------HHH-----------hhChH--------HHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHH
Confidence 000 11110 111222222 21 223333444332 345567777778776
Q ss_pred cC--CCE--EEcC-C--------C--CccEEEEec--CC--HHHHHHHHHHcCc--eeeeecCCeEEEEeccCCCHHHHH
Q 001579 463 KL--GTV--EVQG-L--------P--FFDTVKVKC--AD--AHAIASAAYKIEM--NLRVVDSNTVTASFDETTTLEDVD 521 (1050)
Q Consensus 463 ~~--G~~--~l~~-~--------~--~~~~v~i~~--~~--~~~i~~~L~~~GI--~~~~~~~~~lris~~e~~t~edId 521 (1050)
+. .++ ++.. . | ..+++.+.+ .+ +.++.++|++... ..+ +.++.+.+-+-. -.++|++
T Consensus 370 ~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r-~~~~~~~ld~r~-~~~~~~~ 447 (454)
T TIGR00474 370 AALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDGLSAEKLEARLRELPPPIIGR-IEDDRFLLDLRT-LLEDEEE 447 (454)
T ss_pred hhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCCCCHHHHHHHHhcCCCCEEEE-EECCEEEEEeCc-CCHHHHH
Confidence 63 123 3331 1 1 234444433 33 8899999997654 343 456666665543 3567888
Q ss_pred HHHHHH
Q 001579 522 KLFIVF 527 (1050)
Q Consensus 522 ~lv~~l 527 (1050)
.+++.|
T Consensus 448 ~~~~~~ 453 (454)
T TIGR00474 448 LLIEAL 453 (454)
T ss_pred HHHHHh
Confidence 888776
No 285
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.62 E-value=9.9e-14 Score=161.22 Aligned_cols=276 Identities=17% Similarity=0.206 Sum_probs=177.3
Q ss_pred HhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEE
Q 001579 205 IAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVV 284 (1050)
Q Consensus 205 isqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~ 284 (1050)
..+|......++++.+++++|.+ ...++.+|+.+..+++.+. .++||+|++++..|+++...++. .|.+++
T Consensus 78 ~~~g~~~~~~~l~~~la~~~~~~--~~i~~~~g~~~~~~~l~~~---~~~gd~V~~~~~~~~~~~~~~~~----~g~~~~ 148 (385)
T PRK05958 78 LVTGNSPAHEALEEELAEWFGAE--RALLFSSGYAANLAVLTAL---AGKGDLIVSDKLNHASLIDGARL----SRARVR 148 (385)
T ss_pred cccCCcHHHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHh---CCCCCEEEEeCccCHHHHHHHHh----cCCceE
Confidence 34455566778889999999964 3556667776655543332 23789999999999999887642 466666
Q ss_pred EcC---chhhhc-cCC---CeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCC----------CCc
Q 001579 285 VSD---LKDIDY-KSG---DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP----------PGE 346 (1050)
Q Consensus 285 ~~~---~~~l~~-l~~---~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~----------pg~ 346 (1050)
.++ ++++++ +.+ +++++++..+ |.+|.+.|+++|+++||++|++++++ +..+.+.+.. ...
T Consensus 149 ~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~D-e~~~~g~~~~~g~~~~~~~~~~~ 227 (385)
T PRK05958 149 RYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVD-EAHGTGVLGPQGRGLAAEAGLAG 227 (385)
T ss_pred EeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEE-CcccccccCCCCCchHHhhCCCC
Confidence 664 456665 432 3555555555 67899999999999999999999994 3444443221 111
Q ss_pred ccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhH
Q 001579 347 LGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQA 425 (1050)
Q Consensus 347 ~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~ 425 (1050)
..-+|+++|. |.|+. ++ |++..++++.+.+-.. ..+ +.. . +. +++..
T Consensus 228 ~~~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~---------~~~-~~~-----------~-~~---~~~~~ 275 (385)
T PRK05958 228 EPDVILVGTLGKALGS------SG-AAVLGSETLIDYLINR---------ARP-FIF-----------T-TA---LPPAQ 275 (385)
T ss_pred CCceEEEEechhhccc------CC-cEEEcCHHHHHHHHHh---------Ccc-cee-----------c-CC---CCHHH
Confidence 2234777886 88753 22 6777777665543100 000 100 0 00 11112
Q ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeee
Q 001579 426 LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVV 502 (1050)
Q Consensus 426 l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~i~~~L~~~GI~~~~~ 502 (1050)
..+..+++ .++.. . +++.+++.++.+++.+.|+++| +++..+ ...-+.+.+++ +.++.+.|.++||.+...
T Consensus 276 ~aa~~aal--~~~~~-~-~~~~~~~~~~~~~l~~~L~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~ 349 (385)
T PRK05958 276 AAAARAAL--RILRR-E-PERRERLAALIARLRAGLRALG-FQLMDS-QSAIQPLIVGDNERALALAAALQEQGFWVGAI 349 (385)
T ss_pred HHHHHHHH--HHHhc-C-HHHHHHHHHHHHHHHHHHHHcC-CCcCCC-CCCEEEEEeCCHHHHHHHHHHHHHCCceEecc
Confidence 22222332 33322 2 5678889999999999999887 776532 11224455543 678999999999998642
Q ss_pred -----c--CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 503 -----D--SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 503 -----~--~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
. .+.+|+|++.++|++|++++++.|.
T Consensus 350 ~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~ 382 (385)
T PRK05958 350 RPPTVPAGTSRLRITLTAAHTEADIDRLLEALA 382 (385)
T ss_pred cCCCCCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 1 2579999999999999999999985
No 286
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.62 E-value=1.3e-13 Score=156.94 Aligned_cols=292 Identities=19% Similarity=0.300 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHhhCC-CeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC---------
Q 001579 633 MFNNLGEWLCTITGF-DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG--------- 701 (1050)
Q Consensus 633 ~i~el~~~lael~G~-d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G--------- 701 (1050)
..-++.++++++++. +.+. +.|||++++.+++...|+| ++|++|+ ...++||.+......+|
T Consensus 94 ~Ei~~Aell~~~~p~~e~vr-fvnSGTEAtmsAiRlARa~------TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p 166 (432)
T COG0001 94 LEVELAELLIERVPSIEKVR-FVNSGTEATMSAIRLARAY------TGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSP 166 (432)
T ss_pred HHHHHHHHHHHhcCcccEEE-EecchhHHHHHHHHHHHHh------hCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCC
Confidence 345788999999886 6554 4688987776665555554 5788877 46799998877643221
Q ss_pred ----C------EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEec
Q 001579 702 ----M------KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDG 767 (1050)
Q Consensus 702 ----~------~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~ 767 (1050)
+ .++.+|+ .|++.|++++++.+++++||+++.- ...|++.| .++++.++|+++|+++|+|.
T Consensus 167 ~s~Gvp~~~a~~ti~~~y-----ND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DE 241 (432)
T COG0001 167 SSPGVPADVAKHTLVLPY-----NDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDE 241 (432)
T ss_pred CCCCCChhhhccEEEecC-----CCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEec
Confidence 2 2555665 4999999999998899999999864 56798863 58999999999999999997
Q ss_pred cccccccccCCC-C----cc--cCcEEEeCCccccccCCCCCCCcceeeeecccccCCC-CCCccccCCCCCCCCCCCCC
Q 001579 768 ANMNAQVGLTSP-G----YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPL 839 (1050)
Q Consensus 768 A~~~al~gl~~p-g----~~--GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~l-pg~~vg~~~~~~~~~~~~~t 839 (1050)
+ ..||--+ | .+ -+|+.++ .|.+ +||-.+|.++.++++++.+ |...+.. .
T Consensus 242 V----iTGFR~~~gGaq~~~gi~PDlttl--GKiI-----GGGlP~ga~gGr~eiM~~~~p~g~vyq------------a 298 (432)
T COG0001 242 V----ITGFRVALGGAQGYYGVEPDLTTL--GKII-----GGGLPIGAFGGRAEIMEQLAPLGPVYQ------------A 298 (432)
T ss_pred c----hhhcccCCcccccccCcCcchhhh--hhhh-----cCCcceeeeccHHHHHhhhCCCCCccc------------c
Confidence 6 4555332 1 22 3688776 5877 3667799999999988865 3222211 1
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHCh-hh-HHHHHHHHHHHHHHHHHHHhcc-----CCeeecCCCCccceeEEEec-cc
Q 001579 840 GTIAAAPWGSALILPISYTYIAMMGS-KG-LTEASKIAILNANYMAKRLEKH-----YPILFRGVNGTVAHEFIVDL-RG 911 (1050)
Q Consensus 840 ~~i~sa~~g~~~~~~~a~a~l~~lG~-eG-l~~~a~~~~~~a~yl~~~L~~~-----~~v~~~g~~g~~~~e~i~~~-~~ 911 (1050)
+. +.|+++.+++..+.+..+-. ++ ++++. ..++.|++.|++. +++...+. +..+ .+.|.- .+
T Consensus 299 GT----~sgnplamaAG~atl~~l~~~~~~y~~l~----~~~~~L~~gl~~~~~~~g~~~~v~~~-gsm~-~i~F~~~~~ 368 (432)
T COG0001 299 GT----LSGNPLAMAAGLATLEELMTEEGVYERLD----ALGERLAEGLRAAAERHGIPLTVNRV-GSMF-GIFFTEEGV 368 (432)
T ss_pred CC----CCCcHHHHHHHHHHHHHHHhcccHHHHHH----HHHHHHHHHHHHHHHHhCCCeEEeee-cceE-EEEecCCCC
Confidence 12 34567777777777777655 44 44433 4566666666653 33322211 2111 122211 00
Q ss_pred --ccc--cCCC-CHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 912 --LKN--TAGI-EPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 912 --~~~--~~g~-~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
+.. .+.. ...++.+.|.++|++++...| ...-+++ -+|++|||++++++.+++.++..
T Consensus 369 ~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~---ea~flS~--ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 369 RNYADAKRSDVERFAKFFHHLLNRGVYLAPSQF---EAGFLST--AHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred CCHHHHHhhchHHHHHHHHHHHhCCcccCCccc---cceeeec--ccCHHHHHHHHHHHHHHHHHhhc
Confidence 000 0111 133566778899999864433 3344443 47899999999999988877653
No 287
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.62 E-value=5.1e-14 Score=163.94 Aligned_cols=213 Identities=24% Similarity=0.272 Sum_probs=155.9
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch---
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 289 (1050)
..++++.++++.|.+. +.++.+|++++.++++++ .. +||+||+++..|+.+...+...++.+|++++++|.+
T Consensus 56 ~~~le~~la~l~g~~~--~~~~~sG~~Ai~~al~al-~~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~ 130 (380)
T TIGR01325 56 VAAFEERIAALEGAER--AVATATGMSAIQAALMTL-LQ--AGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLN 130 (380)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHH
Confidence 4567789999999864 677899999988877765 22 789999999999988877776667789999998764
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ +++++++|++++| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+||++.|. |.|+++ |
T Consensus 131 ~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD-~a~~~~~~~~pl~~g~Divv~S~sK~l~g~---g 206 (380)
T TIGR01325 131 AWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVD-NVFATPVLQQPLKLGADVVVYSATKHIDGQ---G 206 (380)
T ss_pred HHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeeccceecCC---C
Confidence 4555 6788999999998 67999999999999999999999994 44454545556788999999998 777542 1
Q ss_pred CcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 367 GP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
-.-+|++..++++.+.+- ..++..|.. .++.. | ++...+.+-+...
T Consensus 207 ~~~gG~vv~~~~~~~~l~-------------------------~~~~~~g~~----~~p~~---a--~~~l~~l~tl~~r 252 (380)
T TIGR01325 207 RVMGGVIAGSEELMAEVA-------------------------VYLRHTGPA----MSPFN---A--WVLLKGLETLSLR 252 (380)
T ss_pred CeEEEEEEeCHHHHHHHH-------------------------HHHHhhCCC----CCHHH---H--HHHHhccCcHHHH
Confidence 123478877776654430 001111111 12221 1 2345566677777
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.++..+++.++++.|++.++++
T Consensus 253 ~~~~~~~a~~la~~L~~~p~v~ 274 (380)
T TIGR01325 253 MQKQFDSALAIAEWLQAQPQVQ 274 (380)
T ss_pred HHHHHHHHHHHHHHHHcCCCcc
Confidence 8888899999999999886454
No 288
>PRK04311 selenocysteine synthase; Provisional
Probab=99.62 E-value=9.4e-14 Score=164.25 Aligned_cols=305 Identities=18% Similarity=0.183 Sum_probs=183.3
Q ss_pred CcHHHHHHHHhCCCcccccCCChhHHhhh-HHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEE
Q 001579 180 VPPVILRNIMENPAWYTQYTPYQAEIAQG-RLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (1050)
Q Consensus 180 ~p~~i~~~i~~~~~~~t~ytpyq~eisqG-~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~V 258 (1050)
+|..+.+.+.+ ++..|......+.+| +-+.+..+++.+|+|+|.+. +.+++++++++..++.++ . +|++|
T Consensus 98 l~~~v~eav~~---~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae~--a~vv~sgtaAl~l~l~~l--~--~GdeV 168 (464)
T PRK04311 98 LSEAAIEAVTE---AARGYSNLEYDLATGKRGSRDRALAALLCALTGAED--ALVVNNNAAAVLLALNAL--A--AGKEV 168 (464)
T ss_pred CCHHHHHHHHH---HHhcccccccchhhcccchHHHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHh--C--CCCEE
Confidence 66666556653 333343211112211 22446678899999999885 678888887765544332 2 78999
Q ss_pred EEcCCCChhHHHH--HHHhccCCCeEEEEcCc------hhhhc-cCCCeeEEEEEcC-CC--Ce--eEccHHHHHHHHHh
Q 001579 259 IIASNCHPQTIDI--CITRADGFDIKVVVSDL------KDIDY-KSGDVCGVLVQYP-GT--EG--EVLDYGDFIKNAHA 324 (1050)
Q Consensus 259 lvs~~~Hps~~~~--~~~~a~~~gi~v~~~~~------~~l~~-l~~~t~~V~v~~p-n~--~G--~i~di~~I~~~ah~ 324 (1050)
|+++.+|.++-.. +....+..|+++++++. +++++ ++++|++|++.++ |+ +| .+.|+++|+++||+
T Consensus 169 Ivs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~ 248 (464)
T PRK04311 169 IVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTNRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKE 248 (464)
T ss_pred EEcchhhhhcCcchhhHHHHHHCCcEEEEECCCCCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHH
Confidence 9999888643110 11123457899888864 35666 8889999988876 54 45 56799999999999
Q ss_pred CCcEEEEEecCc------cccCC-----CCCCcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEee
Q 001579 325 NGVKVVMATDLL------ALTIL-----KPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSI 392 (1050)
Q Consensus 325 ~galliV~a~~~------alg~l-----~~pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~ 392 (1050)
+|++++|++-.. .+++. ..+.++|||++++|+ |.| |||++|++++++++++++...-++
T Consensus 249 ~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~--- 319 (464)
T PRK04311 249 HGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLK--- 319 (464)
T ss_pred cCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhH---
Confidence 999999954110 11111 123458999999999 654 567889999999988776321111
Q ss_pred cCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH--HH----HHhCcccHH---HHHHHHHHHHHHHHHHHhc
Q 001579 393 DSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM--YA----VYHGPEGLK---TIAQRVHGLAGTFALGLKK 463 (1050)
Q Consensus 393 d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~--y~----~~~g~~Gl~---~ia~~~~~~a~~l~~~L~~ 463 (1050)
+.+ |-.|. .+.++.+.+ |+ ++.+-.+++ ...++..++|..+++.|++
T Consensus 320 -----r~l-----------r~dk~--------~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~ 375 (464)
T PRK04311 320 -----RAL-----------RVDKL--------TLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKA 375 (464)
T ss_pred -----HHH-----------hcchH--------HHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 001 11111 122223322 21 122223322 2235556677888888876
Q ss_pred CC--CE--EEcCC---------C--CccEEEEec--CC--HHHHHHHHHHcC--ceeeeecCCeEEEEeccCCCHHHHHH
Q 001579 464 LG--TV--EVQGL---------P--FFDTVKVKC--AD--AHAIASAAYKIE--MNLRVVDSNTVTASFDETTTLEDVDK 522 (1050)
Q Consensus 464 ~G--~~--~l~~~---------~--~~~~v~i~~--~~--~~~i~~~L~~~G--I~~~~~~~~~lris~~e~~t~edId~ 522 (1050)
.. ++ ++... | ..+++.+.+ .+ +.++.++|++.. |..+ +.++.+.+-+-. -.++|++.
T Consensus 376 ~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r-~~~~~~~ld~r~-~~~~~~~~ 453 (464)
T PRK04311 376 ALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGR-IEDGRLLLDLRT-LEEEDEER 453 (464)
T ss_pred ccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEE-EECCEEEEEeCc-CCHHHHHH
Confidence 42 13 33311 1 234544443 33 789999999754 4444 456666665543 36778888
Q ss_pred HHHHHh
Q 001579 523 LFIVFA 528 (1050)
Q Consensus 523 lv~~l~ 528 (1050)
+++.|.
T Consensus 454 ~~~~~~ 459 (464)
T PRK04311 454 LAAALL 459 (464)
T ss_pred HHHHHH
Confidence 888875
No 289
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.62 E-value=6.1e-14 Score=163.72 Aligned_cols=213 Identities=22% Similarity=0.209 Sum_probs=154.7
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch---
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 289 (1050)
+.++++.+|+++|.+. +.++.+|++++.++++++ .. +||+||+++..|+.+...+...++.+|++++.++.+
T Consensus 63 ~~~le~~la~l~g~~~--~v~~ssG~~Ai~~al~al-~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 137 (390)
T PRK08133 63 VTMFQERLAALEGAEA--CVATASGMAAILAVVMAL-LQ--AGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLD 137 (390)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHH
Confidence 4568899999999875 778899998887776655 22 789999999999998887765566789999998764
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|++++|. |.++++ |
T Consensus 138 ~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD-~t~~~~~~~~pl~~g~Divv~S~sK~~~g~---g 213 (390)
T PRK08133 138 AWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVD-NCFCTPALQQPLKLGADVVIHSATKYLDGQ---G 213 (390)
T ss_pred HHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEeecceeecCC---c
Confidence 5555 7789999999998 78999999999999999999999994 45555555667788999999998 877532 2
Q ss_pred CcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 367 GP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
-.-+|++..+++.++++- ..++..| ++.+.+ . .++...|.+-+..+
T Consensus 214 ~~~GG~vv~~~~~~~~~~-------------------------~~~~~~g----~~~~~~---~--a~~~l~gl~tl~~R 259 (390)
T PRK08133 214 RVLGGAVVGSKELMEEVF-------------------------GFLRTAG----PTLSPF---N--AWVFLKGLETLSLR 259 (390)
T ss_pred ceEeEEEEcCHHHHHHHH-------------------------HHHHHhC----CCCCHH---H--HHHHHcccchHHHH
Confidence 123467777666543320 0011111 011112 1 12234455567777
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.++..+++..+++.|++..+++
T Consensus 260 ~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 260 MEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 7888899999999999885465
No 290
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.62 E-value=9.3e-14 Score=163.73 Aligned_cols=271 Identities=15% Similarity=0.137 Sum_probs=172.4
Q ss_pred HHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHH-hccCCCeEEEEcCc------
Q 001579 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICIT-RADGFDIKVVVSDL------ 288 (1050)
Q Consensus 216 ~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~-~a~~~gi~v~~~~~------ 288 (1050)
.+..+++++|.+.+++ ++.+||.+.++++.++ .. +||+|+++...|+++...+.. .....|++++.++.
T Consensus 76 ~~~~la~~~g~~~~~i-~~~sgt~al~~~l~~l-~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 151 (416)
T PRK00011 76 AIDRAKELFGAEYANV-QPHSGSQANAAVYFAL-LK--PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGL 151 (416)
T ss_pred HHHHHHHHhCCCceee-ecCCchHHHHHHHHHh-cC--CCCEEEEeccccCCccccccccccccceeeEeecCcCcccCC
Confidence 4568999999987655 3456777777665554 33 899999999999875433211 11234566666543
Q ss_pred ---hhhhc-cC-CCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC-----CCCCcccceEEEecC-c
Q 001579 289 ---KDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELGADIVVGSA-Q 357 (1050)
Q Consensus 289 ---~~l~~-l~-~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-----~~pg~~GaDivvgs~-k 357 (1050)
+++++ +. .++++|++..+ .+|...|+++|+++||++|+++++++ .++.|.. ..+-. ++|++++|+ |
T Consensus 152 ~d~~~l~~~i~~~~~k~v~~~~~-~~~~~~~~~~I~~la~~~~~~livD~-a~~~g~~~~g~~~~~~~-~~di~~~S~~K 228 (416)
T PRK00011 152 IDYDEVEKLALEHKPKLIIAGAS-AYSRPIDFKRFREIADEVGAYLMVDM-AHIAGLVAAGVHPSPVP-HADVVTTTTHK 228 (416)
T ss_pred cCHHHHHHHHHhcCCCEEEECCC-cCCCccCHHHHHHHHHHcCCEEEEEC-cchhcccccCccCCCCC-CCcEEEecCCc
Confidence 34555 54 36888887654 45777899999999999999999942 2333322 12233 789999998 6
Q ss_pred cccccCCCCCcceEEEEEe-hhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001579 358 RFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1050)
Q Consensus 358 ~~g~P~~~GGP~~G~la~~-~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~ 436 (1050)
+|+ ||.+|++.++ +++.+++.... .+ + + .+++. .....++.++. .
T Consensus 229 ~l~------g~~gg~i~~~~~~~~~~l~~~~---------~~-~----------~---~~~~~---~~~~aa~~~a~--~ 274 (416)
T PRK00011 229 TLR------GPRGGLILTNDEELAKKINSAV---------FP-G----------I---QGGPL---MHVIAAKAVAF--K 274 (416)
T ss_pred CCC------CCCceEEEeCCHHHHHHHHHHh---------Cc-c----------c---cCCcc---HHHHHHHHHHH--H
Confidence 553 4556777775 56665541000 00 0 0 00111 11222222222 1
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcC-CCCccEEEEecC----CHHHHHHHHHHcCceeee----e-----
Q 001579 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQG-LPFFDTVKVKCA----DAHAIASAAYKIEMNLRV----V----- 502 (1050)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~-~~~~~~v~i~~~----~~~~i~~~L~~~GI~~~~----~----- 502 (1050)
....++++++.++..++++++++.|+++| +++.. ......+.+.++ ...++.+.|.++||.++. +
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~ 353 (416)
T PRK00011 275 EALEPEFKEYAQQVVKNAKALAEALAERG-FRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSP 353 (416)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCC
Confidence 22345788899999999999999999997 88753 121223445543 257788999999998862 1
Q ss_pred -cCCeEEEEecc----CCCHHHHHHHHHHHh
Q 001579 503 -DSNTVTASFDE----TTTLEDVDKLFIVFA 528 (1050)
Q Consensus 503 -~~~~lris~~e----~~t~edId~lv~~l~ 528 (1050)
.+..+|++... ..|++|+++++++|+
T Consensus 354 ~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~ 384 (416)
T PRK00011 354 FVTSGIRIGTPAITTRGFKEAEMKEIAELIA 384 (416)
T ss_pred CCCCceEecCHHHhhcCcCHHHHHHHHHHHH
Confidence 13468987644 456999999999996
No 291
>PRK07505 hypothetical protein; Provisional
Probab=99.62 E-value=7.4e-14 Score=163.92 Aligned_cols=291 Identities=17% Similarity=0.193 Sum_probs=169.7
Q ss_pred HHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHH--HhCCCEEEEEc
Q 001579 631 QEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA--AMCGMKIVSVG 708 (1050)
Q Consensus 631 ~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a--~~~G~~vv~V~ 708 (1050)
.+...++++.|++++|. . .+..++|+.++++++..++.+. ..+ ++++.|+...+.||+..... ...+.+++.++
T Consensus 90 ~~~~~~l~~~la~~~~~-~-~~~~~sG~~a~~~ai~~~~~~~-~~~-~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~ 165 (402)
T PRK07505 90 SQILKDLEEALSELFGA-S-VLTFTSCSAAHLGILPLLASGH-LTG-GVPPHMVFDKNAHASLNILKGICADETEVETID 165 (402)
T ss_pred hHHHHHHHHHHHHHhCC-C-EEEECChHHHHHHHHHHHHhcc-cCC-CCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeC
Confidence 45678999999999998 3 3455678777766655443211 111 13344455568888653221 22456888887
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCC------c
Q 001579 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------Y 781 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg------~ 781 (1050)
. .|+++|+++++ +++.++++++|+ .+|.+. ++++|.++|+++|+++++|+++. ++++.+.| .
T Consensus 166 ~-----~d~~~l~~~~~---~~~~~~vl~~p~~~~G~~~-~~~~i~~l~~~~~~~li~DEa~~--~~~~g~~g~~~~~~~ 234 (402)
T PRK07505 166 H-----NDLDALEDICK---TNKTVAYVADGVYSMGGIA-PVKELLRLQEKYGLFLYIDDAHG--LSIYGKNGEGYVRSE 234 (402)
T ss_pred C-----CCHHHHHHHHh---cCCCEEEEEecccccCCcC-CHHHHHHHHHHcCCEEEEECccc--ccCcCCCCCchHHHH
Confidence 6 48999999987 456778888884 578776 69999999999999999999863 22222111 1
Q ss_pred cc---Cc--EEEeCCccccccCCCCCCCcceeeee-cccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHH
Q 001579 782 IG---AD--VCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1050)
Q Consensus 782 ~G---aD--v~~~~~hKtf~~P~g~GGPg~G~i~v-~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1050)
++ .| +++.++.|.|+. +| |++.+ ++++.+.+....... ...++. +...+++
T Consensus 235 ~~~~~~d~~i~~~s~sK~~~~------~G-g~~~~~~~~~~~~~~~~~~~~----------t~~~~~------~~~a~aa 291 (402)
T PRK07505 235 LDYRLNERTIIAASLGKAFGA------SG-GVIMLGDAEQIELILRYAGPL----------AFSQSL------NVAALGA 291 (402)
T ss_pred cCCCCCCCeEEEEechhhhhc------cC-eEEEeCCHHHHHHHHHhCCCc----------eeCCCC------CHHHHHH
Confidence 22 24 445577888752 22 56654 444444331100000 000111 1123333
Q ss_pred HHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 001579 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1050)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~ 935 (1050)
+.+.+..+..+.+.+..+...++.+++.+.+.. .+ .+ .......+.+. ......++.++|.++||.+.
T Consensus 292 ~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~--~g---~~~~i~~~~~~-----~~~~~~~~~~~l~~~Gi~v~ 359 (402)
T PRK07505 292 ILASAEIHLSEELDQLQQKLQNNIALFDSLIPT--EQ--SG---SFLPIRLIYIG-----DEDTAIKAAKQLLDRGFYTS 359 (402)
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh--cC--CC---CCCCEEEEEeC-----CHHHHHHHHHHHHHCCCeEe
Confidence 445555555555554443333333332221111 11 11 11111112221 01135689999999999986
Q ss_pred CCCCC-CC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 936 TMSWP-VP---GTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 936 ~~~~p-v~---~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
...+| ++ +.|||+|+..+|++|+|+++++|.+++.+
T Consensus 360 ~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 360 PVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred eecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence 55555 22 58999999999999999999999988643
No 292
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.62 E-value=2.9e-13 Score=159.67 Aligned_cols=327 Identities=13% Similarity=0.170 Sum_probs=199.5
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC--eeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d--~~~l~~~sGa~ge~a~Llair 669 (1050)
..+|++.+++..++..+. ....+..+..+. .+...++.+.|+++++.. .-.++.+||++++++++..+|
T Consensus 52 ~~lGh~~p~v~~ai~~ql-~~~~~~~~~~~~--------~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr 122 (421)
T PRK09792 52 LNTGHRHPDLVAAVEQQL-QQFTHTAYQIVP--------YESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIAR 122 (421)
T ss_pred hcCCCCCHHHHHHHHHHH-HhccCcccCccC--------CHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHH
Confidence 457888877777766653 211111110011 123347888888887532 223556799999999988888
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC-------------EEEEEcCCCC--CC---CCHHHHHHHHHc--CC
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAK--GN---INIEELRKAAEA--NR 728 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~-------------~vv~V~~d~~--g~---iD~e~L~~~i~~--~~ 728 (1050)
.| . +|++|+ ...++||....+....|. .++.+++..+ +. -|++.+++.+++ +.
T Consensus 123 ~~---t---gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~ 196 (421)
T PRK09792 123 AH---T---GRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEA 196 (421)
T ss_pred Hh---c---CCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCC
Confidence 75 2 344555 577899987665443221 1344444221 21 245788888864 23
Q ss_pred CCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCc------c--cCcEEEeCCccccc
Q 001579 729 DNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFC 796 (1050)
Q Consensus 729 ~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~------~--GaDv~~~~~hKtf~ 796 (1050)
+++++|+++.. +..|+..+ .+++|.++|+++|+++|+|.++ .|+.+.|. + .+|++++ .|+++
T Consensus 197 ~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~----tg~gr~G~~~a~~~~~~~pDi~t~--gK~l~ 270 (421)
T PRK09792 197 KQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQ----SGFARTGKLFAMDHYADKPDLMTM--AKSLA 270 (421)
T ss_pred CceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc----cCCCCCCchhHHHhcCCCCcEEEe--ehhhc
Confidence 67888888754 34575432 4999999999999999999864 44444432 2 3687666 59884
Q ss_pred cCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHH
Q 001579 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1050)
Q Consensus 797 ~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1050)
||-.+|.+++++++...+.... ..+++.|+++.++++.+.+..+..+.+. ++..
T Consensus 271 -----~G~pigav~~~~~i~~~~~~~~------------------~~~T~~gnpl~~aaa~a~l~~l~~~~~~---~~~~ 324 (421)
T PRK09792 271 -----GGMPLSGVVGNANIMDAPAPGG------------------LGGTYAGNPLAVAAAHAVLNIIDKESLC---ERAN 324 (421)
T ss_pred -----CCCceEEEEEcHHHHhccCCCC------------------cCCCCCCCHHHHHHHHHHHHHHHhhhHH---HHHH
Confidence 4456888998887766543110 0112335666677777888887655433 3333
Q ss_pred HHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccccc--ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEc
Q 001579 877 LNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK--NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 949 (1050)
Q Consensus 877 ~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~--~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~ 949 (1050)
...+++.+.|+++ ++.+ ..|. |.. +.+.+.+-. .........+.+.+.++|+.+.... +..+.||+.|
T Consensus 325 ~~g~~l~~~l~~l~~~~p~v~~vrG~-Gl~---~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g-~~~~~irl~P 399 (421)
T PRK09792 325 QLGQRLKNTLIDAKESVPAIAAVRGL-GSM---IAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG-AYGNVIRFLY 399 (421)
T ss_pred HHHHHHHHHHHHHHHhCCCcceeccc-ceE---EEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC-CCCCEEEEeC
Confidence 5677777777654 3322 1121 322 334443100 0001224678888999999874211 2247899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 001579 950 TESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 950 te~~t~eeid~fv~aL~~i~~ 970 (1050)
+...+++|||+++++|.+++.
T Consensus 400 ~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 400 PLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CCcCCHHHHHHHHHHHHHHHh
Confidence 999999999999999988763
No 293
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.61 E-value=8.4e-14 Score=162.95 Aligned_cols=212 Identities=20% Similarity=0.222 Sum_probs=151.3
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 290 (1050)
.++++.+|++.|++.+ .++.+|++++.+++++. +. +||+|++++..|+.+...++..++.+|++++.++. ++
T Consensus 68 ~~Le~~lA~l~G~~~~--~~~~sG~~Ai~~~l~~~-l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~ 142 (398)
T PRK07504 68 DMFEKRMCALEGAEDA--RATASGMAAVTAAILCQ-VK--AGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDN 142 (398)
T ss_pred HHHHHHHHHHhCCCee--eEecCHHHHHHHHHHHH-hC--CCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 4577899999999874 45778888776555543 22 88999999999999888877666778999998763 45
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ ++++|++|++.+| |.+|.+.|+++|.++||++|++++|+ +.++.+....|.++|+|+++.|. |.|++| |.
T Consensus 143 l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD-~a~a~~~~~~~~~~gaDivv~S~sK~l~g~---g~ 218 (398)
T PRK07504 143 WEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVD-NVFATPLFQKPLELGAHIVVYSATKHIDGQ---GR 218 (398)
T ss_pred HHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEE-CCccccccCCchhhCCCEEEeeccccccCC---cc
Confidence 666 7789999999998 68999999999999999999999994 45566666677889999999998 877642 22
Q ss_pred cceEEEEEehhhhhc-CCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 368 PHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 368 P~~G~la~~~~~~r~-lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
.-+|++..+++.+.+ +. ..++..|. +..+. .|+ +...+-+-+...
T Consensus 219 ~~GG~vv~~~~~i~~~~~-------------------------~~~~~~g~----~~s~~---~A~--~~l~~L~tl~~R 264 (398)
T PRK07504 219 CLGGVVLSDKAWIEEHLQ-------------------------DYFRHTGP----SLSPF---NAW--TLLKGLETLPVR 264 (398)
T ss_pred ceEEEEEeCcHHHHHHHH-------------------------HHHHHhCC----CCCHH---HHH--HHHhccchHHHH
Confidence 234677766654321 10 00011111 01111 222 234455566777
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.++..+++..+++.|++..+++
T Consensus 265 ~~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 265 VRQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCcc
Confidence 7778899999999999875454
No 294
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.61 E-value=2.4e-14 Score=165.07 Aligned_cols=280 Identities=17% Similarity=0.167 Sum_probs=176.4
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~ 714 (1050)
.++++++++..|++..++..+.|++. +..++++.+. .+ ++++|+++...|+.+...++..|++++.++.++++.
T Consensus 60 ~~l~~~~a~~~g~~~~~I~~~~Gs~e--~i~~~~~~~~-~~---g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~ 133 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQVLVSRGADE--GIELLIRAFC-EP---GKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQ 133 (351)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHH--HHHHHHHHhc-CC---CCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCC
Confidence 47888999999998766666666542 3334444432 11 236899988766666666889999999999988888
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHH---HHHHcCCEEEEeccccccccccCCC----CcccCcE
Q 001579 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICK---IIHDNGGQVYMDGANMNAQVGLTSP----GYIGADV 786 (1050)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~---la~~~G~~v~vD~A~~~al~gl~~p----g~~GaDv 786 (1050)
+|++++++++ +++++|++++|| .+|.+. +.+++.+ .|++ +++|++|+++.. +...... ....-=+
T Consensus 134 ~d~~~l~~~~----~~~~lv~l~nPnNPTG~~~-~~~~l~~l~~~~~~-~~~vivDEay~~-f~~~~s~~~~~~~~~n~i 206 (351)
T PRK01688 134 LDLPAIADNL----DGVKVVYVCSPNNPTGNLI-NPQDLRTLLELTRG-KAIVVADEAYIE-FCPQASLAGWLAEYPHLV 206 (351)
T ss_pred CCHHHHHHhc----cCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECchhh-cCCCCChHHHHhhCCCEE
Confidence 9999999887 468899999995 799886 4555444 4444 688999998632 1111110 1111125
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+..+++|+|++ .|-++|++++++++.+.+... ....++++ ....++.+++..-+.+
T Consensus 207 v~rSfSK~~gl----aGlRiGy~i~~~~~i~~l~~~--------------~~~~~v~~------~~~~~a~~~L~~~~~~ 262 (351)
T PRK01688 207 ILRTLSKAFAL----AGLRCGFTLANEEVINLLLKV--------------IAPYPLST------PVADIAAQALSPQGIA 262 (351)
T ss_pred EEecchHhhcC----HHHHHhHHhCCHHHHHHHHhc--------------cCCCCCCH------HHHHHHHHHHhcchHH
Confidence 56677888754 467889999888766544210 00012221 1111222233211123
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-C-CCC
Q 001579 867 GLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-W-PVP 942 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~-~-pv~ 942 (1050)
-+++..+....+++++.+.|+++ +...++. + .+-+.+++. +.+++.++|.++||.+.... + ...
T Consensus 263 ~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps--~--~nfi~~~~~--------~~~~l~~~L~~~gi~vr~~~~~~~~~ 330 (351)
T PRK01688 263 AMRERVAEINANRQWLIAALKEIPCVEQVFDS--E--TNYILARFT--------ASSAVFKSLWDQGIILRDQNKQPGLS 330 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC--C--CcEEEEEcC--------CHHHHHHHHHHCCeEEEECCCcCCCC
Confidence 34455555566788999999875 2223321 1 122344442 46789999999999875432 3 245
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 943 GTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 943 ~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
+++||++. +.+|+++|+++|+
T Consensus 331 ~~iRis~~---~~~e~~~l~~al~ 351 (351)
T PRK01688 331 NCLRITIG---TREECQRVIDALR 351 (351)
T ss_pred CeEEEeCC---CHHHHHHHHHhhC
Confidence 78999986 6899999999873
No 295
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=2.9e-14 Score=168.01 Aligned_cols=143 Identities=20% Similarity=0.143 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch--
Q 001579 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1050)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 289 (1050)
...++++.+|++.|.+. +.++.+||+|+.+++.++ +. +||+||++..+|+++...+...++.+|++++++|++
T Consensus 65 ~~~~le~~lA~l~g~~~--av~~sSGt~Al~~al~~l-l~--~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~ 139 (433)
T PRK08134 65 TVAVLEERVAALEGGVG--AIATASGQAALHLAIATL-MG--AGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDI 139 (433)
T ss_pred HHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCH
Confidence 35668899999999876 678999999888777665 33 789999999999998887765556789999999764
Q ss_pred -hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-cccc
Q 001579 290 -DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFG 360 (1050)
Q Consensus 290 -~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g 360 (1050)
++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|+ ..++.+.+..|-++|||+++.|+ |.++
T Consensus 140 ~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD-~t~a~~~~~~pl~~GaD~vv~S~tK~l~ 213 (433)
T PRK08134 140 DGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVD-STFTTPYLLRPFEHGADLVYHSATKFLG 213 (433)
T ss_pred HHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCCEEEeccccccC
Confidence 4555 7889999999887 78999999999999999999999994 34566666667789999999999 6554
No 296
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.61 E-value=3.7e-14 Score=165.60 Aligned_cols=283 Identities=19% Similarity=0.191 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEEEEEc
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 708 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~vv~V~ 708 (1050)
...++++.++++.|.+.. +..++|+.+..+++ . .. .++++||++...|+.+.. .+...|++++.++
T Consensus 55 ~~~~le~~lA~l~g~~~~-v~~~sG~~ai~~~l---~-~l-----~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 124 (390)
T PRK08064 55 TREALEDIIAELEGGTKG-FAFASGMAAISTAF---L-LL-----SKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVD 124 (390)
T ss_pred hHHHHHHHHHHHhCCCCe-EEECCHHHHHHHHH---H-Hh-----CCCCEEEEccCccchHHHHHHHHHHHcCCEEEEEC
Confidence 356889999999998854 55677876553332 2 11 245789998877764332 2456899999998
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEE
Q 001579 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~ 787 (1050)
.+ |+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.... ...|.++|+|++
T Consensus 125 ~~-----d~~~l~~~l~---~~tklV~l~~p~NptG~~~-dl~~I~~la~~~g~~vvvD~a~~~~~--~~~~~~~g~Div 193 (390)
T PRK08064 125 MT-----NLEEVAQNIK---PNTKLFYVETPSNPLLKVT-DIRGVVKLAKAIGCLTFVDNTFLTPL--LQKPLDLGADVV 193 (390)
T ss_pred CC-----CHHHHHHhcC---CCceEEEEECCCCCCcEec-cHHHHHHHHHHcCCEEEEECCCCccc--ccCchhhCCcEE
Confidence 63 7899999996 789999999995 799987 89999999999999999999864322 345667899999
Q ss_pred EeCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 788 HLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 788 ~~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+.++||+|+.| +|--.|++++++ ++.+.+.... ...+...+ + ..+|. ...|-+
T Consensus 194 v~S~tK~~~G~---~~~laG~~v~~~~~~~~~l~~~~-------------~~~g~~~~-~-------~~a~l--~~~gl~ 247 (390)
T PRK08064 194 LHSATKFLAGH---SDVLAGLAVVKDEELAQKLYFLQ-------------NSFGAVLG-V-------QDCWL--VLRGLK 247 (390)
T ss_pred EeecceeccCC---ccceeEEEEeCCHHHHHHHHHHH-------------HhcCCCCC-H-------HHHHH--HHcccC
Confidence 99999998522 111247777653 4443331000 00111111 1 11332 333444
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCeeecCCCC-c-------cc--eeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 001579 867 GLTEASKIAILNANYMAKRLEKH---YPILFRGVNG-T-------VA--HEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~---~~v~~~g~~g-~-------~~--~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~ 933 (1050)
-+....++...++..+++.|+++ ..+.|++-.+ + .+ ...++.+. ++ +.+++.+.+...++.
T Consensus 248 tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~-~~-----~~~~~~~f~~~l~l~ 321 (390)
T PRK08064 248 TLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFT-LQ-----SEEAVRQFVSHVKLP 321 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEE-EC-----CHHHHHHHHHhCCcc
Confidence 45566677788899999999875 3455554111 0 00 11233332 11 234444444445552
Q ss_pred -----cCC----------CC---CC--------C-CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 934 -----GPT----------MS---WP--------V-PGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 934 -----~~~----------~~---~p--------v-~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
.++ +. .| + .+.+|+++...++++.|+.|.++|.++
T Consensus 322 ~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 322 VFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred eEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 110 00 11 2 478999999877777777777777653
No 297
>PRK08960 hypothetical protein; Provisional
Probab=99.61 E-value=1.6e-13 Score=160.13 Aligned_cols=296 Identities=11% Similarity=0.090 Sum_probs=175.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--eeeeccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~~l~~~sG-a~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++.+..|.+ ...+..++| ++|. .++++.+. .++++|++++..|..+...+...|.++
T Consensus 69 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al---~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~ 140 (387)
T PRK08960 69 RGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGAL---LLASSLLV-----DPGKHWLLADPGYPCNRHFLRLVEGAA 140 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHH---HHHHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCeE
Confidence 576666666666666655543 334444444 4443 23333331 246889999998888888888899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc-cC
Q 001579 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG-LT 777 (1050)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~g-l~ 777 (1050)
+.++++++ +.+|+++|+++++ ++++++++++| |.+|... +.+++|+++|+++|+++++|.++..-. .. ..
T Consensus 141 ~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~ 217 (387)
T PRK08960 141 QLVPVGPDSRYQLTPALVERHWN---ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA 217 (387)
T ss_pred EEEecCcccCCCCCHHHHHHHhC---ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 99998765 3699999999886 67888999999 5789875 357889999999999999999753211 11 00
Q ss_pred CCCcccCc-EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHH
Q 001579 778 SPGYIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1050)
Q Consensus 778 ~pg~~GaD-v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1050)
.......+ +++.+++|+|+.| |.++|++++++++.+.+.. . ......+.+...+.. +
T Consensus 218 ~~~~~~~~vi~~~S~SK~~g~~----GlRiG~~~~~~~~~~~~~~-~-------------~~~~~~~~s~~~q~a----~ 275 (387)
T PRK08960 218 SVLEVDDDAFVLNSFSKYFGMT----GWRLGWLVAPPAAVPELEK-L-------------AQNLYISASTPAQHA----A 275 (387)
T ss_pred ChhhccCCEEEEeecccccCCc----ccEEEEEEcCHHHHHHHHH-H-------------HhhhccCCCHHHHHH----H
Confidence 11122234 4567789988543 6779999998766554310 0 000111211122221 1
Q ss_pred HHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCCccc
Q 001579 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHG 934 (1050)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~Gi~~ 934 (1050)
.+.+.....+-+.+..+...++.+.+.+.|+++ +.+.. .+.+..+ +.++++. .+.+..+++++|. ++||.+
T Consensus 276 ~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~p~g~~f--~~~~~~~----~~~~~~~~~~~ll~~~gi~v 348 (387)
T PRK08960 276 LACFEPETLAILEARRAEFARRRDFLLPALRELGFGIAV-EPQGAFY--LYADISA----FGGDAFAFCRHFLETEHVAF 348 (387)
T ss_pred HHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCc-CCCeeEE--EEEeccc----cCCCHHHHHHHHHHhCCEEE
Confidence 222221112334444455556677888888774 22211 1222221 3456542 1246678998875 689986
Q ss_pred CC-CCCC---CCCEEEEEcCCCCCHHHHHHHHHHH
Q 001579 935 PT-MSWP---VPGTLMIEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 935 ~~-~~~p---v~~~lrI~~te~~t~eeid~fv~aL 965 (1050)
.. ..|. ..+.+||+++. +.+++...++.|
T Consensus 349 ~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l 381 (387)
T PRK08960 349 TPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERI 381 (387)
T ss_pred cCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHH
Confidence 42 2332 24689999984 344444433333
No 298
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.61 E-value=1.3e-14 Score=167.42 Aligned_cols=287 Identities=19% Similarity=0.235 Sum_probs=182.5
Q ss_pred HHHHHHHHhhC------CCee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEc
Q 001579 636 NLGEWLCTITG------FDSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1050)
Q Consensus 636 el~~~lael~G------~d~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~ 708 (1050)
++++.+++.++ .+.. .+..++|++.....+..+ ... .++++|++++..|......++..|.+++.++
T Consensus 48 ~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~---~~~---~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~ 121 (363)
T PF00155_consen 48 ELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRL---LKI---NPGDTVLVPDPCYPSYIEAARLLGAEVIPVP 121 (363)
T ss_dssp HHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHH---HHS---STTSEEEEEESSSTHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhc---ccc---cccccceecCCccccccccccccCceeeecc
Confidence 45555555555 4444 677778876442222221 111 2457899999988878888999999999999
Q ss_pred CC--CCCCCCHHHHHHHHHcCC-C--CEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccccccCCCC
Q 001579 709 TD--AKGNINIEELRKAAEANR-D--NLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG 780 (1050)
Q Consensus 709 ~d--~~g~iD~e~L~~~i~~~~-~--~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg 780 (1050)
++ .++.+|+++|++.++++. + ++.+|++++| |.+|..- +++++|+++|+++|+++++|.++.... +..++
T Consensus 122 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~--~~~~~ 199 (363)
T PF00155_consen 122 LDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLI--FGDPD 199 (363)
T ss_dssp EEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGB--SSSSH
T ss_pred ccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccc--cCCCc
Confidence 65 457899999999998531 1 5789999999 4688763 367888888999999999998864221 11110
Q ss_pred --------cccCc-EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHH
Q 001579 781 --------YIGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1050)
Q Consensus 781 --------~~GaD-v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1050)
+.+.+ +++.+++|+|+.| |.++|++++.+.+.+.+.... .....+ ...+..
T Consensus 200 ~~~~~~~~~~~~~vi~~~S~SK~~g~~----GlRvG~i~~~~~~~~~l~~~~--------------~~~~~~--~~~~~~ 259 (363)
T PF00155_consen 200 FGPIRSLLDEDDNVIVVGSLSKSFGLP----GLRVGYIVAPPELIERLRRFQ--------------RSGLSS--SPMQAA 259 (363)
T ss_dssp THHHHGHHTTTSTEEEEEESTTTTTSG----GGTEEEEEEEHHHHHHHHHHH--------------HHTTSS--HHHHHH
T ss_pred cCcccccccccccceeeeecccccccc----ccccccccchhhhhhhhhhcc--------------cccccc--chhhHH
Confidence 12334 6777888988644 677999999876665442110 000111 111211
Q ss_pred HHHHHHHHHHHHCh--hhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH
Q 001579 852 ILPISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM 928 (1050)
Q Consensus 852 ~~~~a~a~l~~lG~--eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~ 928 (1050)
+...+..-+. +-+++..+....+.+++.+.|++. +.+ +.. .+..+ +++.... .+..++.++|.
T Consensus 260 ----~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~-~~~-~~~~~--~~~~~~~------~~~~~l~~~L~ 325 (363)
T PF00155_consen 260 ----AAAALSDPELVEKWLEELRERLRENRDLLREALEEIGITV-LPP-EAGFF--LWVRLDP------NDAEELAQELL 325 (363)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEE-EHH-SBSSE--EEEEESH------HHHHHHHHHHH
T ss_pred ----HHHhhhcccccccccccchhhHHHHHHHHHHHHHHhhhhe-eec-cCccE--EEEEccc------chHHHHHHHHH
Confidence 1112221111 134556666778889999999876 333 222 22222 3344331 14578999999
Q ss_pred HC-CcccCC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 001579 929 DY-GFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 929 d~-Gi~~~~-~~~pv~~~lrI~~te~~t~eeid~fv~aL 965 (1050)
++ ||.+.. ..|.+++.+||++ -..+++++++++++|
T Consensus 326 ~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 326 EEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp HHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred HhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 87 998643 2333578999999 678899999999875
No 299
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.61 E-value=7.2e-14 Score=162.81 Aligned_cols=284 Identities=14% Similarity=0.152 Sum_probs=184.3
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~ 714 (1050)
.++++.+++.+|++..++..++|++. +..++++.+. .++++|++++..++.+...++..|++++.++.++++.
T Consensus 89 ~~lr~~ia~~~~~~~~~I~~t~Ga~~--~i~~~~~~~~-----~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~ 161 (380)
T PLN03026 89 RRLRAALAEDSGLESENILVGCGADE--LIDLLMRCVL-----DPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFS 161 (380)
T ss_pred HHHHHHHHHHhCcChhhEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCC
Confidence 46889999999988655666666542 2223333331 2457899988766555555778999999999877788
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCC----CcccCcEEEe
Q 001579 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP----GYIGADVCHL 789 (1050)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p----g~~GaDv~~~ 789 (1050)
+|+++|++++. .+++++|++++|+ .+|.+. +.+++.++++.. +++++|.++.. +.....+ ....-.+++.
T Consensus 162 ~d~~~l~~~~~--~~~~~~v~l~~P~NPTG~~~-~~~~l~~l~~~~-~~vi~DeaY~~-~~~~~~~~~~~~~~~~viv~~ 236 (380)
T PLN03026 162 LDVPRIVEAVE--THKPKLLFLTSPNNPDGSII-SDDDLLKILELP-ILVVLDEAYIE-FSTQESRMKWVKKYDNLIVLR 236 (380)
T ss_pred cCHHHHHHHHh--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHhcC-CEEEEECcchh-hcCCcchHHHHHhCCCEEEEe
Confidence 99999999984 2678999999994 799987 789999998765 89999998631 1110011 1122347778
Q ss_pred CCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHH
Q 001579 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1050)
Q Consensus 790 ~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1050)
++.|.|++| |.++|+++.+++++..+-.. +...+++ ..++. ++.+.+. ..+-++
T Consensus 237 SfSK~~gla----GlRiGy~~~~~~~i~~l~~~--------------~~~~~~~--~~~q~----aa~~aL~--~~~~~~ 290 (380)
T PLN03026 237 TFSKRAGLA----GLRVGYGAFPLSIIEYLWRA--------------KQPYNVS--VAAEV----AACAALS--NPKYLE 290 (380)
T ss_pred cchHhhcCc----cccceeeecCHHHHHHHHHh--------------cCCCCCC--HHHHH----HHHHHhh--CHHHHH
Confidence 888988654 78999999887665543100 0001121 11121 1222222 122245
Q ss_pred HHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CCCCCEEEE
Q 001579 870 EASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVPGTLMI 947 (1050)
Q Consensus 870 ~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~-~pv~~~lrI 947 (1050)
+..+...++.+++.+.|+++ +...++ +.+.+ +.+++. .+.+..++.++|.++||.+.... ++..+.+||
T Consensus 291 ~~~~~~~~~r~~l~~~L~~~~~~~~~p-~~~~f---~~~~~~-----~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRi 361 (380)
T PLN03026 291 DVKNALVEERERLFGLLKEVPFLEPYP-SDANF---ILCRVT-----SGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRV 361 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCeECC-CCCeE---EEEECC-----CCCCHHHHHHHHHHCCeEEEECCCCCCCCEEEE
Confidence 55556667788898999875 211222 11221 345543 13567899999999999875332 234578999
Q ss_pred EcCCCCCHHHHHHHHHHHHHH
Q 001579 948 EPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 948 ~~te~~t~eeid~fv~aL~~i 968 (1050)
++. +.+++++|+++|+++
T Consensus 362 s~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 362 SVG---KPEHTDALMEALKQL 379 (380)
T ss_pred ecC---CHHHHHHHHHHHHHh
Confidence 986 678999999999754
No 300
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.61 E-value=1.2e-13 Score=160.24 Aligned_cols=211 Identities=17% Similarity=0.111 Sum_probs=153.5
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 290 (1050)
..+++.++.|-|.+. +.++.+|++|+.++++++ +. +||+||+++..++.+...++..++.+|+++++++. ++
T Consensus 67 ~~Le~~la~le~~~~--~v~~sSG~aAi~~~l~al-l~--~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~ 141 (395)
T PRK05967 67 DALCKAIDALEGSAG--TILVPSGLAAVTVPFLGF-LS--PGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAG 141 (395)
T ss_pred HHHHHHHHHHhCCCC--EEEECcHHHHHHHHHHHh-cC--CCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHH
Confidence 345678888888654 567888998888877765 33 89999999999999988776667789999999986 34
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.++...|.++||||++.|. |.+++ -|+
T Consensus 142 l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD-~t~a~p~~~~pl~~GaDivv~S~tKy~~G---h~d 217 (395)
T PRK05967 142 IAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMD-NTWATPLYFRPLDFGVDISIHAATKYPSG---HSD 217 (395)
T ss_pred HHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEE-CCccCceecChhHcCCCEEEEecccccCC---CCC
Confidence 666 7889999999997 78999999999999999999999994 45566666789999999999998 55432 222
Q ss_pred cceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHH
Q 001579 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIA 447 (1050)
Q Consensus 368 P~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia 447 (1050)
--+|.+..++++.+++ ...++..|.. + ++. ..|+...|-+-|.-+.
T Consensus 218 ~~~G~v~~~~~~~~~l-------------------------~~~~~~~G~~-~---~p~-----da~l~~rgl~Tl~lR~ 263 (395)
T PRK05967 218 ILLGTVSANEKCWPQL-------------------------LEAHGTLGLC-A---GPD-----DTYQILRGLRTMGIRL 263 (395)
T ss_pred eeEEEEEcCHHHHHHH-------------------------HHHHHHcCCC-C---CHH-----HHHHHHcCcccHHHHH
Confidence 2346555555433222 0011111211 0 111 2345666666677777
Q ss_pred HHHHHHHHHHHHHHhcCCCE
Q 001579 448 QRVHGLAGTFALGLKKLGTV 467 (1050)
Q Consensus 448 ~~~~~~a~~l~~~L~~~G~~ 467 (1050)
+|..++|..+++.|++...+
T Consensus 264 ~~~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 264 EHHRKSALEIARWLEGRPDV 283 (395)
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 88889999999999987545
No 301
>PRK08912 hypothetical protein; Provisional
Probab=99.61 E-value=1.4e-13 Score=160.62 Aligned_cols=300 Identities=16% Similarity=0.149 Sum_probs=183.8
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ee-eec-cCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~-~l~-~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
+|..++.+.+.+++.+..|.+ .. ++. .++++++.. ++++.+. .++++|+++...|+.+...++..|.+
T Consensus 63 ~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~---~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~ 134 (387)
T PRK08912 63 MGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALA---AALLALV-----EPGDEVVLFQPLYDAYLPLIRRAGGV 134 (387)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHH---HHHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCCE
Confidence 576677767777777666653 32 343 444444432 2233221 24578999998887777778899999
Q ss_pred EEEEcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc---
Q 001579 704 IVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--- 775 (1050)
Q Consensus 704 vv~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~g--- 775 (1050)
++.+++++ ++.+|+++|+++++ +++++|++++| |.+|.+- +++++|+++|+++|+++++|.++..- ..+
T Consensus 135 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 211 (387)
T PRK08912 135 PRLVRLEPPHWRLPRAALAAAFS---PRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRH 211 (387)
T ss_pred EEEEecCcccCcCCHHHHHHHhC---ccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCC
Confidence 99999875 47899999999986 68889999999 5788764 25888999999999999999886311 111
Q ss_pred --c-CCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 776 --L-TSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 776 --l-~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
+ ..++..+-++++.+++|.|++| |.++|++++++++...+-.. ......+.++..+..
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~~~~~l~~~--------------~~~~~~~~~~~~q~~- 272 (387)
T PRK08912 212 IPLMTLPGMRERTVKIGSAGKIFSLT----GWKVGFVCAAPPLLRVLAKA--------------HQFLTFTTPPNLQAA- 272 (387)
T ss_pred cChhhCCCccCceEEEeechhhccCc----CceeEEEecCHHHHHHHHHH--------------HhhccccCChHHHHH-
Confidence 0 0111123568889999998644 67799999987665443100 000001111111111
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HC
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~ 930 (1050)
+..++. -..+-+++..+...++.+++.+.|++. +++. .+.+.++ +.+++++.. ...+..+++++|. ++
T Consensus 273 ---~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~--~~~g~~~--l~~~l~~~~--~~~~~~~~~~~l~~~~ 342 (387)
T PRK08912 273 ---VAYGLG-KPDDYFEGMRADLARSRDRLAAGLRRIGFPVL--PSQGTYF--LTVDLAPLG--LAEDDVAFCRRLVEEA 342 (387)
T ss_pred ---HHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--CCCcceE--EEecccccC--CCCCHHHHHHHHHhcC
Confidence 111121 112223445555667788898999875 3332 2222221 344554211 1246778999975 67
Q ss_pred CcccCC-CCC----CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 931 GFHGPT-MSW----PVPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 931 Gi~~~~-~~~----pv~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
|+.+.. ..| +..+.+||++.. ..++++..++.|.+.+
T Consensus 343 gV~v~pg~~f~~~~~~~~~iRl~~~~--~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 343 GVAAIPVSAFYEEDPVTSVVRFCFAK--RDATLDEAVERLAAAR 384 (387)
T ss_pred CEEEecchhhCCCCCCCCEEEEEEeC--CHHHHHHHHHHHHHHH
Confidence 997632 223 235789999985 4677777776666544
No 302
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=4.8e-14 Score=166.24 Aligned_cols=142 Identities=24% Similarity=0.253 Sum_probs=117.3
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 290 (1050)
..+++.+|++.|.+. +.++.+|++++.++++++ +. +||+|++++..|+.+...+...++..|++++.+|. ++
T Consensus 67 ~~Le~~lA~leg~~~--al~~~sG~~Ai~~al~~l-l~--~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~ 141 (431)
T PRK08248 67 DVFEKRIAALEGGIG--ALAVSSGQAAITYSILNI-AS--AGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPEN 141 (431)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHH-hC--CCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHH
Confidence 346789999999764 778999999988877765 33 89999999999998888887767789999999976 45
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccc
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~ 361 (1050)
+++ +++++++|++++| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|+++.|+ |.+++
T Consensus 142 l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD-~t~a~~~~~~pl~~gaDivv~S~tK~lgg 214 (431)
T PRK08248 142 FEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVD-NTFASPYLLRPIEHGADIVVHSATKFIGG 214 (431)
T ss_pred HHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEe-CCCCccccCChhHcCCCEEEEcCccccCC
Confidence 555 7788999999887 78999999999999999999999994 34555555666789999999998 66654
No 303
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.61 E-value=2.8e-14 Score=173.45 Aligned_cols=273 Identities=13% Similarity=0.100 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--
Q 001579 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1050)
Q Consensus 211 e~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 288 (1050)
..+.+.|+.+|+++|++.+.. +++|+|+++.+++++.. . +||+||++++||.|+...+. ..|++.+++.+
T Consensus 195 G~i~eAe~~AA~~fgAd~tyf-vvNGTS~~n~av~~a~~-~--~Gd~VLvdRN~HKSv~haLi----lsga~PVYl~P~r 266 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRSYM-VTNGTSTANKIVGMYSA-P--AGSTVLIDRNCHKSLTHLMM----MSDVTPIYFRPTR 266 (714)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCchHHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHH----HcCCeEEEecccc
Confidence 468899999999999998655 77888999999888753 3 89999999999999998764 24777777643
Q ss_pred ----------------hhhhc-c--CCCee---EEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEE----ecCccccCCC
Q 001579 289 ----------------KDIDY-K--SGDVC---GVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA----TDLLALTILK 342 (1050)
Q Consensus 289 ----------------~~l~~-l--~~~t~---~V~v~~pn~~G~i~di~~I~~~ah~~galliV~----a~~~alg~l~ 342 (1050)
+.+++ + .++.+ .+++|+|+|+|.+.|+++|++++|.++ ++|+ +++.....++
T Consensus 267 n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~ 344 (714)
T PRK15400 267 NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (714)
T ss_pred cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccC
Confidence 23333 2 23444 799999999999999999999999988 4663 2221122222
Q ss_pred --CCCcccc---e--EEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEeccccccccccc
Q 001579 343 --PPGELGA---D--IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD 414 (1050)
Q Consensus 343 --~pg~~Ga---D--ivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRe 414 (1050)
.+-..|+ | +++.|. |.++. +. ++++++++.. + | |-|.+
T Consensus 345 ~~sam~~ga~~~~~i~vtQStHKtL~a-lT----QaS~LHvkg~----v---------d----------------~~~~n 390 (714)
T PRK15400 345 GKCGMSGGRVEGKVIYETQSTHKLLAA-FS----QASMIHVKGD----V---------N----------------EETFN 390 (714)
T ss_pred CcChhhcCCCCCCceEEEEchhhcccc-hh----HHhHHHHcCC----C---------C----------------HHHHH
Confidence 2334677 5 999999 66643 11 3455544321 1 1 00111
Q ss_pred ccCCCccchhHHHHHHHHHH--HHHhC-cccHHHHHHHHHHHHHHHHHHHhcCCC------EEEcCCC------------
Q 001579 415 KATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGLP------------ 473 (1050)
Q Consensus 415 kaTsnict~~~l~a~~aa~y--~~~~g-~~Gl~~ia~~~~~~a~~l~~~L~~~G~------~~l~~~~------------ 473 (1050)
.+=.-.-|+++.|.++|++- ..++. +.| +++.++..+.+..+++.|.++.+ ++++.+.
T Consensus 391 ~a~~m~~STSPsY~l~ASLD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p 469 (714)
T PRK15400 391 EAYMMHTTTSPHYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRS 469 (714)
T ss_pred HHHHHHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCc
Confidence 11122235688999999983 23343 344 56778888999999999988865 5655211
Q ss_pred ---------------CccE--EEEecC-----------C--HHHHHHHHHHcCceeeeecCCeEEEEeccCCCHHHHHHH
Q 001579 474 ---------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKL 523 (1050)
Q Consensus 474 ---------------~~~~--v~i~~~-----------~--~~~i~~~L~~~GI~~~~~~~~~lris~~e~~t~edId~l 523 (1050)
..|+ ++|.++ + +..+.+.|+++||.+...+...+.+.++..+|++++++|
T Consensus 470 ~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L 549 (714)
T PRK15400 470 DSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSL 549 (714)
T ss_pred cccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHH
Confidence 1243 455442 2 678889999999999998889999999999999999999
Q ss_pred HHHHh
Q 001579 524 FIVFA 528 (1050)
Q Consensus 524 v~~l~ 528 (1050)
+++|.
T Consensus 550 ~~aL~ 554 (714)
T PRK15400 550 LRALT 554 (714)
T ss_pred HHHHH
Confidence 99996
No 304
>PRK07337 aminotransferase; Validated
Probab=99.61 E-value=1.4e-13 Score=160.78 Aligned_cols=302 Identities=15% Similarity=0.149 Sum_probs=179.3
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--eeeeccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~~l~~~sG-a~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++.+..|.+ ...+..++| ++|.. +++..+. .++++|++++..|+.+...++..|.++
T Consensus 67 ~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~ 138 (388)
T PRK07337 67 LGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALL---LACLALV-----ERGDEVLMPDPSYPCNRHFVAAAEGRP 138 (388)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHH---HHHHHhc-----CCCCEEEEeCCCchhhHHHHHHcCCEE
Confidence 566666666666666656653 333333344 44432 2333321 246789999988877777788899999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccc-cC
Q 001579 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG-LT 777 (1050)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al~g-l~ 777 (1050)
+.++++++ +.+|+++|+++++ +++++|++++| |.+|.+. +++++|+++|+++|+++++|.++.. ...+ ..
T Consensus 139 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 215 (388)
T PRK07337 139 VLVPSGPAERFQLTAADVEAAWG---ERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPV 215 (388)
T ss_pred EEeecCCccCCcCCHHHHHhhcC---ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 99998753 5899999999986 78899999999 4689864 3689999999999999999987531 1111 11
Q ss_pred CCCcccCcEE-EeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHH
Q 001579 778 SPGYIGADVC-HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPIS 856 (1050)
Q Consensus 778 ~pg~~GaDv~-~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1050)
....++.+++ +.+++|.|+.| |.++|++++.+++...+-.. ......+.+...+.. +
T Consensus 216 ~~~~~~~~vi~~~S~SK~~~~~----G~RiG~~~~~~~l~~~l~~~--------------~~~~~~~~s~~~q~~----~ 273 (388)
T PRK07337 216 SALSLGDDVITINSFSKYFNMT----GWRLGWLVVPEALVGTFEKL--------------AQNLFICASALAQHA----A 273 (388)
T ss_pred ChhhccCCEEEEEechhhcCCc----hhheeeeecCHHHHHHHHHH--------------HHHhccCCChHHHHH----H
Confidence 1123344554 56889988644 67899999887665433100 000011111112221 1
Q ss_pred HHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHH-HHCCccc
Q 001579 857 YTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDYGFHG 934 (1050)
Q Consensus 857 ~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL-~d~Gi~~ 934 (1050)
..++..-+.+-+++..+...++.+++.+.|++. +.+.. .+.+.. -++++++...+....+..+++++| .++|+.+
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~p~~g~--f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 350 (388)
T PRK07337 274 LACFEPDTLAIYERRRAEFKRRRDFIVPALESLGFKVPV-MPDGAF--YVYADCRGVAHPAAGDSAALTQAMLHDAGVVL 350 (388)
T ss_pred HHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCeeE--EEEEecccccCCCCCCHHHHHHHHHHhCCEEE
Confidence 111111011224444455556778888888874 22211 122222 145666532111124677888775 5789986
Q ss_pred CC-CCCC---CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001579 935 PT-MSWP---VPGTLMIEPTESESKEELDRYCDALIS 967 (1050)
Q Consensus 935 ~~-~~~p---v~~~lrI~~te~~t~eeid~fv~aL~~ 967 (1050)
.. -.|. ..+.+||++.. +.++++..++.|.+
T Consensus 351 ~pg~~f~~~~~~~~~Ri~~~~--~~~~l~~~l~rl~~ 385 (388)
T PRK07337 351 VPGRDFGPHAPRDYIRLSYAT--SMSRLEEAVARLGK 385 (388)
T ss_pred eCchhhCCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 42 2232 24789999974 45666655555544
No 305
>PRK07777 aminotransferase; Validated
Probab=99.61 E-value=1.5e-13 Score=160.55 Aligned_cols=298 Identities=15% Similarity=0.107 Sum_probs=184.9
Q ss_pred ccHHHHHHHHHHHHHHhhCCCe--e--eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 628 QGYQEMFNNLGEWLCTITGFDS--F--SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d~--~--~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
+|..++.+.+.+++.+..|.+. . .+..++|++|..+.+ ..+. .++++|+++...|+.+...+++.|.+
T Consensus 61 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~---~~~~-----~~gd~vli~~p~y~~~~~~~~~~g~~ 132 (387)
T PRK07777 61 PGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAV---LGLV-----EPGDEVLLIEPYYDSYAAVIAMAGAH 132 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHH---HHhc-----CCCCEEEEeCCCchhhHHHHHHCCCE
Confidence 5777777777777777778652 1 244455555553333 2221 24578998887776666667889999
Q ss_pred EEEEcCCCC---CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccc-
Q 001579 704 IVSVGTDAK---GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG- 775 (1050)
Q Consensus 704 vv~V~~d~~---g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al~g- 775 (1050)
++.++++++ +.+|+++|+++++ +++++|++++| |.+|.+. +++++|+++|+++|+++++|.++.. .+.+
T Consensus 133 ~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~ 209 (387)
T PRK07777 133 RVPVPLVPDGRGFALDLDALRAAVT---PRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA 209 (387)
T ss_pred EEEeecCCccCCCcCCHHHHHHhcC---cccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC
Confidence 999998765 3689999999986 67899999998 4688763 3699999999999999999988631 1101
Q ss_pred ----cC-CCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhH
Q 001579 776 ----LT-SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1050)
Q Consensus 776 ----l~-~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~ 850 (1050)
+. .++..+.++++.+++|+|++| |.++|++.+++++...+-... .......++ + .+.
T Consensus 210 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~l~~~~~~~~------------~~~~~~~~~-~-~q~ 271 (387)
T PRK07777 210 RHLPLATLPGMRERTVTISSAAKTFNVT----GWKIGWACGPAPLIAAVRAAK------------QYLTYVGGA-P-FQP 271 (387)
T ss_pred CcccHhhCCCCcCcEEEEeechhhccCc----CceeEEEecCHHHHHHHHHHH------------hhcccCCCC-H-HHH
Confidence 11 122234678889999999654 667899998876654332100 000001111 1 111
Q ss_pred HHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-
Q 001579 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM- 928 (1050)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~- 928 (1050)
++..++. .+.+-+++..+...++.+++.+.|++. +++ +. +.+.++ +++++++.. ..+..++++.|.
T Consensus 272 ----~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~-~~g~~~--~~~~~~~~~---~~~~~~~~~~l~~ 339 (387)
T PRK07777 272 ----AVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEAGFEV-HD-SAGTYF--LCADPRPLG---YDDGTEFCRALPE 339 (387)
T ss_pred ----HHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhCCCCc-cC-CCcceE--EEecccccC---CCCHHHHHHHHHH
Confidence 1112222 233334455556667888899999875 333 22 122221 334543211 135789999996
Q ss_pred HCCcccCC-CCCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 929 DYGFHGPT-MSWP-----VPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 929 d~Gi~~~~-~~~p-----v~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
++|+.+.. -.|. ..+.+||++.. +++++++.++.|.++
T Consensus 340 ~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~--~~~~l~~~l~~l~~~ 383 (387)
T PRK07777 340 RVGVAAIPMSVFYDPADAWNHLVRFAFCK--RDDTLDEAIRRLRAL 383 (387)
T ss_pred hCCEEEeCchHhCCCCcCCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 67998632 2231 13589999864 578888877777654
No 306
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.61 E-value=7.5e-14 Score=169.80 Aligned_cols=272 Identities=13% Similarity=0.103 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--
Q 001579 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1050)
Q Consensus 211 e~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 288 (1050)
..+.+.|+.+|+++|++.+.. +++|+|.++.+++++.. . +||+||++++||.|+...+. ..|++.+++.+
T Consensus 195 G~i~eAe~~aA~~fgAd~tyf-vvNGTS~~n~av~~a~~-~--~Gd~VLvdRN~HKSv~~aLi----lsga~PVYl~P~~ 266 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQSYI-VTNGTSTSNKIVGMYAA-P--AGSTLLIDRNCHKSLAHLLM----MSDVVPIWLKPTR 266 (713)
T ss_pred hHHHHHHHHHHHHhCCCcEEE-EeCChHHHHHHHHHHhc-C--CCCEEEeecccHHHHHHHHH----HcCCeeEEecccc
Confidence 468899999999999998655 77888999999888753 3 89999999999999998763 24777777643
Q ss_pred ----------------hhhhc-c--CCCe---eEEEEEcCCCCeeEccHHHHHHHHHhCCcEE-EEE----ecCccccCC
Q 001579 289 ----------------KDIDY-K--SGDV---CGVLVQYPGTEGEVLDYGDFIKNAHANGVKV-VMA----TDLLALTIL 341 (1050)
Q Consensus 289 ----------------~~l~~-l--~~~t---~~V~v~~pn~~G~i~di~~I~~~ah~~gall-iV~----a~~~alg~l 341 (1050)
+.+++ + .++. +++++|+|+|+|.+.|+++|++++ |+.+ +|+ +++.....+
T Consensus 267 n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~ 343 (713)
T PRK15399 267 NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIY 343 (713)
T ss_pred cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCccc
Confidence 23333 2 2343 689999999999999999999999 6666 473 221111212
Q ss_pred C--CCCcc--cceEE---EecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccc
Q 001579 342 K--PPGEL--GADIV---VGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRR 413 (1050)
Q Consensus 342 ~--~pg~~--GaDiv---vgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irR 413 (1050)
+ .+-.. |+|.+ +.|. |.++. +. ++++++++.. ++ .+ .-+.+|.
T Consensus 344 ~~~sam~~~~~aD~~i~~tQStHKtL~a-lT----QaS~iHvk~~----vd-------~~-~~n~a~~------------ 394 (713)
T PRK15399 344 QGKSGMSGERVPGKVIFETQSTHKMLAA-FS----QASLIHIKGE----YD-------EE-TFNEAFM------------ 394 (713)
T ss_pred CCcChhhCCCCCCeeeeeeeehhccccc-cc----hheeeeecCC----CC-------HH-HHHHHHH------------
Confidence 2 11112 68888 8888 65643 22 4678877542 10 00 0011222
Q ss_pred cccCCCccchhHHHHHHHHHH--HHHhC-cccHHHHHHHHHHHHHHHHHHHhcCCC------EEEcCC------------
Q 001579 414 DKATSNICTAQALLANMAAMY--AVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGT------VEVQGL------------ 472 (1050)
Q Consensus 414 ekaTsnict~~~l~a~~aa~y--~~~~g-~~Gl~~ia~~~~~~a~~l~~~L~~~G~------~~l~~~------------ 472 (1050)
-.-|+++.|.++|++- ..++. +.| +++.++..+++..+++.|.++++ |+++++
T Consensus 395 -----m~~STSPsY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~ 468 (713)
T PRK15399 395 -----MHTSTSPSYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVA 468 (713)
T ss_pred -----HHcCCCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecC
Confidence 2235588999999983 23343 344 56778888899999999988754 455431
Q ss_pred ---C------------CccE--EEEecC-----------C--HHHHHHHHHHcCceeeeecCCeEEEEeccCCCHHHHHH
Q 001579 473 ---P------------FFDT--VKVKCA-----------D--AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDK 522 (1050)
Q Consensus 473 ---~------------~~~~--v~i~~~-----------~--~~~i~~~L~~~GI~~~~~~~~~lris~~e~~t~edId~ 522 (1050)
. ..|+ +++.++ + +..+.+.|+++||.+...+...+.+.++..+|++++++
T Consensus 469 p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~ 548 (713)
T PRK15399 469 PGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMG 548 (713)
T ss_pred CCcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHH
Confidence 0 2243 555443 3 67899999999999999888999999999999999999
Q ss_pred HHHHHh
Q 001579 523 LFIVFA 528 (1050)
Q Consensus 523 lv~~l~ 528 (1050)
|+++|.
T Consensus 549 L~~aL~ 554 (713)
T PRK15399 549 LLRGLT 554 (713)
T ss_pred HHHHHH
Confidence 999996
No 307
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.61 E-value=3.7e-13 Score=156.54 Aligned_cols=306 Identities=18% Similarity=0.244 Sum_probs=189.7
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
..||++...+..+...+..... . ....+ ..+...++.++++++++.+.+ +..++|++++++++..+|.|
T Consensus 41 ~~lG~~~p~v~~a~~~~~~~~~-~-~~~~~--------~~~~~~~la~~l~~~~~~~~~-~~~~sG~~a~~~A~~~a~~~ 109 (377)
T PRK02936 41 CNLGHCHPTVTKAVQEQLDDIW-H-VSNLF--------TNSLQEEVASLLAENSAGDLV-FFCNSGAEANEAALKLARKH 109 (377)
T ss_pred ccCCCCCHHHHHHHHHHHHhcc-c-ccccc--------CCHHHHHHHHHHHhcCCCCEE-EEeCCcHHHHHHHHHHHHHh
Confidence 3678877666555444321111 1 11111 224566788888888876643 66789999888887766654
Q ss_pred HHhcCCCCCCEEEE-cCCCCCccHHHHHhCCCE------------EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEc
Q 001579 672 HKARGDHHRNVCII-PVSAHGTNPATAAMCGMK------------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY 738 (1050)
Q Consensus 672 ~~~~G~~~r~~Vli-p~saHgt~pa~a~~~G~~------------vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~ 738 (1050)
. ++++|++ ..++||.........|.. ++.++. .|+++|+++++ +++++|+++.
T Consensus 110 ---~---g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~---~~~~~ii~e~ 175 (377)
T PRK02936 110 ---T---GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPF-----NDIKALKEVMN---EEVAAVMLEV 175 (377)
T ss_pred ---c---CCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCC-----CCHHHHHHhcc---CCeEEEEEec
Confidence 2 2344554 568899876654433321 122222 27999999986 7899999987
Q ss_pred CC-Cccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCC------cc--cCcEEEeCCccccccCCCCCCCcc
Q 001579 739 PS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------YI--GADVCHLNLHKTFCIPHGGGGPGM 806 (1050)
Q Consensus 739 Pn-~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg------~~--GaDv~~~~~hKtf~~P~g~GGPg~ 806 (1050)
+. ..|++. +.+++|.++|++||+++++|.++. ++.+.| .+ ..|++++ .|+|+ +|..+
T Consensus 176 i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~----g~g~~g~~~~~~~~~~~~di~t~--sK~l~-----~G~~i 244 (377)
T PRK02936 176 VQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQT----GIGRTGTLFAYEQFGLDPDIVTV--AKGLG-----NGIPV 244 (377)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc----CCCcCchhhHHHhhCCCCcEEEE--ccccc-----CCCcc
Confidence 64 455553 249999999999999999999852 333322 12 2577654 68884 44567
Q ss_pred eeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHH
Q 001579 807 GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRL 886 (1050)
Q Consensus 807 G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L 886 (1050)
|++++++++.+.+.... .....+ +++..++++.+.+..+..+.+ .++...+.++++++|
T Consensus 245 g~v~~~~~~~~~~~~~~--------------~~~t~~----~~~~~~aaa~a~l~~~~~~~~---~~~~~~~~~~l~~~L 303 (377)
T PRK02936 245 GAMIGKKELGTAFGPGS--------------HGSTFG----GNPLAMAAAKEVLQVIKQPSF---LEEVQEKGEYFLQKL 303 (377)
T ss_pred EEEEEcHHHHhhccCCC--------------CCCCCC----CCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHH
Confidence 88888887766552110 001111 233444445556655532222 244456778888888
Q ss_pred hcc---CCeee--cCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHH
Q 001579 887 EKH---YPILF--RGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRY 961 (1050)
Q Consensus 887 ~~~---~~v~~--~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~f 961 (1050)
++. ++... .+ .|. -+.+++.+ +...+.+.|.++|+.+.... .+.+||+|+..+++++||++
T Consensus 304 ~~~~~~~~~~~~v~~-~g~---~~~i~~~~-------~~~~~~~~l~~~gv~v~~~g---~~~lRi~p~~~~~~~~i~~~ 369 (377)
T PRK02936 304 QEELEHLECVKNIRG-KGL---MIGIECTE-------EVAPVIEQLREEGLLVLSAG---PNVIRLLPPLVVTKEELDQA 369 (377)
T ss_pred HHHHhhCCcEEeEee-cce---EEEEEecc-------hHHHHHHHHHHCCeEEecCC---CCEEEEECCcccCHHHHHHH
Confidence 763 33221 11 121 13444431 26788999999998864322 37899999999999999999
Q ss_pred HHHHHHH
Q 001579 962 CDALISI 968 (1050)
Q Consensus 962 v~aL~~i 968 (1050)
++.|.++
T Consensus 370 i~~l~~~ 376 (377)
T PRK02936 370 VYLLKKV 376 (377)
T ss_pred HHHHHHh
Confidence 9999765
No 308
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.61 E-value=9.6e-14 Score=161.42 Aligned_cols=212 Identities=17% Similarity=0.161 Sum_probs=151.6
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch---
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 289 (1050)
..++++.+|++.|.+. +.++.+|++++.+++.. + ++||+|++++..|+.+...+...++..|++++.+|..
T Consensus 52 ~~~Le~~la~l~g~~~--al~~~SG~~Al~~~l~~--l--~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e 125 (380)
T PRK06176 52 RFALEELIADLEGGVK--GFAFASGLAGIHAVFSL--F--QSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLS 125 (380)
T ss_pred HHHHHHHHHHHhCCCC--EEEECCHHHHHHHHHHH--c--CCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHH
Confidence 3457789999999876 56778999888754432 2 2899999999999999888877777889999988754
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ ++++|++|++++| |.+|.+.|+++|+++||++|++++|+ +..+.+....|.++|+|++++|. |.+++|-
T Consensus 126 ~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD-~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~--- 201 (380)
T PRK06176 126 QIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVD-NTFATPYYQNPLLLGADIVVHSGTKYLGGHS--- 201 (380)
T ss_pred HHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCCEEEecCceeccCCc---
Confidence 4555 7789999999998 68999999999999999999999994 45555555567789999999998 7765442
Q ss_pred CcceEEEEEeh-hhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001579 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1050)
Q Consensus 367 GP~~G~la~~~-~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1050)
..-+|++.+++ ++..++. ..|+.-|. .. .+. ..|+...|-+.+..
T Consensus 202 d~~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~--~~--~~~-----~~~l~~~gl~tl~~ 247 (380)
T PRK06176 202 DVVAGLVTTNNEALAQEIA-------------------------FFQNAIGG--VL--GPQ-----DSWLLQRGIKTLGL 247 (380)
T ss_pred cceeeEEEecHHHHHHHHH-------------------------HHHHHhcC--CC--CHH-----HHHHHHhccCcHHH
Confidence 12356777654 3332220 00111010 00 011 12344556666777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Q 001579 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
..++..+++..+++.|++...+.
T Consensus 248 R~~~~~~~a~~la~~L~~~p~v~ 270 (380)
T PRK06176 248 RMEAHQKNALCVAEFLEKHPKVE 270 (380)
T ss_pred HHHHHHHHHHHHHHHHHhCCCee
Confidence 77888889999999999874353
No 309
>PRK07046 aminotransferase; Validated
Probab=99.61 E-value=8.8e-14 Score=164.99 Aligned_cols=329 Identities=16% Similarity=0.139 Sum_probs=201.0
Q ss_pred cccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHH
Q 001579 591 MIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 591 ~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~ 670 (1050)
...||++..++..++..+. ....+..+ + .+...++.+.|+++++++.+ .+.+||+++.++++..+|+
T Consensus 86 ~~~lGh~~p~i~~Av~~q~-~~~~~~~~-~----------~~~~~~lAe~l~~~~~~~~v-~F~nSGtEA~e~AlrlAR~ 152 (453)
T PRK07046 86 GAMFGHSPAPVARALAEQA-RRGLTTML-P----------SEDAAWVGEELARRFGLPYW-QVATTATDANRFVLRWARA 152 (453)
T ss_pred ccccCCCCHHHHHHHHHHH-HhCCCCCC-C----------CHHHHHHHHHHHHHhCCCEE-EEECCHHHHHHHHHHHHHH
Confidence 3457888888877766653 22111110 1 12345788899999987765 5678999988888888887
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHh------------CCC------EEEEEcCCCCCCCCHHHHHHHHHcCCCCE
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAM------------CGM------KIVSVGTDAKGNINIEELRKAAEANRDNL 731 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~------------~G~------~vv~V~~d~~g~iD~e~L~~~i~~~~~~t 731 (1050)
| ++|++|+ +..++||.+...... .|+ .+..+++ .|++++++.+. .+++
T Consensus 153 ~------TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~--~~~v 219 (453)
T PRK07046 153 V------TGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-----NDLAALEAALA--DGDV 219 (453)
T ss_pred h------hCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-----CCHHHHHHHhC--CCCe
Confidence 6 2356666 567899986543211 111 1222332 38999999995 3689
Q ss_pred EEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEecccc--ccccccCCCCcccCcEEEeCCccccccCCCCCCCc
Q 001579 732 STLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANM--NAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPG 805 (1050)
Q Consensus 732 aaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~--~al~gl~~pg~~GaDv~~~~~hKtf~~P~g~GGPg 805 (1050)
++|+++.- ...|.+.+ .++++.++|+++|+++|+|.++. .+++|...--..-+|++++ .|.++ +|-|
T Consensus 220 Aavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~gv~PDi~t~--gK~lg----gG~P- 292 (453)
T PRK07046 220 AAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHGLEPDFLVV--GKPIA----GGVP- 292 (453)
T ss_pred EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhCCCccceee--hhhhc----CCCc-
Confidence 99988753 34576653 38999999999999999999864 2333321101124799876 58774 4445
Q ss_pred ceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHH
Q 001579 806 MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKR 885 (1050)
Q Consensus 806 ~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~ 885 (1050)
+|.+++++++.+.+.... .. .........+++.|+++.++++.+.|..+-.+++ .++.....++|+++
T Consensus 293 i~av~g~~~i~~~~~~~~--~~-------~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~---~~~~~~~g~~l~~~ 360 (453)
T PRK07046 293 CAVYGFSAELAERAQAAK--AS-------APPGHSGIGTTLSANALAMAAMRATLAEVMTEAA---YAHMLALAARLAAG 360 (453)
T ss_pred ceeeeehHHHHHHHhhcc--cc-------CCCCCceeCCCCcccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHH
Confidence 788888887765442100 00 0000011223355788888889999988865544 33444678888888
Q ss_pred Hhcc---CCe--eecCCCCccceeEEEecccccc--c--CCCC---HHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCC
Q 001579 886 LEKH---YPI--LFRGVNGTVAHEFIVDLRGLKN--T--AGIE---PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESE 953 (1050)
Q Consensus 886 L~~~---~~v--~~~g~~g~~~~e~i~~~~~~~~--~--~g~~---~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~ 953 (1050)
|+++ +.+ ...|. |.. ..+.++-.+... . ...+ ...+...|.++|+.+.. ..+.++++|+ +
T Consensus 361 L~~l~~~~~~~~~v~g~-G~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~----~~~~~~~~p~--~ 432 (453)
T PRK07046 361 LRAVIARHGLPWHVTRV-GAR-VEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITP----FHNMMLVCPA--T 432 (453)
T ss_pred HHHHHHhCCCCeEEEEe-CcE-EEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEec----ccCcEEEeCC--C
Confidence 8763 222 22232 222 122232111000 0 0001 23566778899998742 2356778875 8
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 001579 954 SKEELDRYCDALISIREEI 972 (1050)
Q Consensus 954 t~eeid~fv~aL~~i~~ei 972 (1050)
|++|||++++++.+++.++
T Consensus 433 t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 433 TAADVDRLVAAFDACLGEL 451 (453)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998765
No 310
>PRK12414 putative aminotransferase; Provisional
Probab=99.61 E-value=1.3e-13 Score=160.91 Aligned_cols=297 Identities=12% Similarity=0.115 Sum_probs=183.4
Q ss_pred cccHHHHHHHHHHHHHHhhCCCe---e-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCC
Q 001579 627 AQGYQEMFNNLGEWLCTITGFDS---F-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~d~---~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~ 702 (1050)
.+|..++.+++++++++.+|.+. . .+..++|++|... +++++. .++++|+++...|......+++.|.
T Consensus 65 ~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~---~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~ 136 (384)
T PRK12414 65 MAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYA---AISALV-----HPGDEVIYFEPSFDSYAPIVRLQGA 136 (384)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHH---HHHHhc-----CCCCEEEEeCCCccchHHHHHHcCC
Confidence 36888889999999999999752 2 2344455554432 333321 2457899998877666666788999
Q ss_pred EEEEEcCCC-CCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccc-ccccc-
Q 001579 703 KIVSVGTDA-KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGL- 776 (1050)
Q Consensus 703 ~vv~V~~d~-~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al~gl- 776 (1050)
+++.+++++ ++.+|+++|+++++ +++++|++++| |.+|.+- +++++|+++|+++|+++++|+++.. .+.+-
T Consensus 137 ~~~~v~~~~~~~~~d~~~l~~~l~---~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~ 213 (384)
T PRK12414 137 TPVAIKLSPEDFRVNWDEVAAAIT---PRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGAR 213 (384)
T ss_pred EEEEEecCccccccCHHHHHhhcC---cccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCC
Confidence 999999875 46799999999996 68999999999 5788863 3699999999999999999998632 11110
Q ss_pred CCC-Ccc----cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHH
Q 001579 777 TSP-GYI----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1050)
Q Consensus 777 ~~p-g~~----GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1050)
..| ..+ +--+++.+++|.|++| |.++|++++.+++...+... +.....+.+...+..
T Consensus 214 ~~~~~~~~~~~~~~i~~~SfSK~~~~p----GlRiG~~v~~~~l~~~l~~~--------------~~~~~~~~s~~~q~a 275 (384)
T PRK12414 214 HHSMARHRELAERSVIVSSFGKSYHVT----GWRVGYCLAPAELMDEIRKV--------------HQFMVFSADTPMQHA 275 (384)
T ss_pred ccCcccCcCccCcEEEEecccccccCc----cceEEEEecCHHHHHHHHHH--------------HhheecCCCcHHHHH
Confidence 001 111 1237778889988654 78899999887765443210 000111111112211
Q ss_pred HHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHH-HHHHH
Q 001579 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRLMD 929 (1050)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~va-krL~d 929 (1050)
+..++. ..+.+.+..+...++++++.+.|++. +.+ ++ +.+.++ +++++++.. +....+++ +.|.+
T Consensus 276 ----~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~-~~-~~gg~~--~~~~~~~~~---~~~~~~~~~~~l~~ 342 (384)
T PRK12414 276 ----FAEALA--EPASYLGLGAFYQRKRDLLARELAGSRFEL-LP-SEGSFF--MLARFRHFS---DESDSDFVLRLIRD 342 (384)
T ss_pred ----HHHHhc--CChHHHHHHHHHHHHHHHHHHHHHhCCCee-cC-CCcceE--EEEcccccC---CCCHHHHHHHHHHh
Confidence 112221 11223344455556778888888875 332 21 223232 334554211 12345666 45668
Q ss_pred CCcccCC-CCCC---C-CCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001579 930 YGFHGPT-MSWP---V-PGTLMIEPTESESKEELDRYCDALIS 967 (1050)
Q Consensus 930 ~Gi~~~~-~~~p---v-~~~lrI~~te~~t~eeid~fv~aL~~ 967 (1050)
+||.+.. ..|. . .+.+||++.. +++++++.++.|.+
T Consensus 343 ~gV~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 343 ARVATIPLSAFYTDGTDTGLIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred CCEEEecchhhcCCCCCCCEEEEEecC--CHHHHHHHHHHHhh
Confidence 8998643 2342 1 3689999984 57777777776653
No 311
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.60 E-value=5.1e-14 Score=161.91 Aligned_cols=297 Identities=10% Similarity=0.052 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHHHhhCCCe---eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCcc-HHHHHhCCCEE
Q 001579 630 YQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTN-PATAAMCGMKI 704 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~---~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~-saHgt~-pa~a~~~G~~v 704 (1050)
..+++.++++.++++++.+. +.+..+||+.|.++++..+- . +++++++.. ...|.. ...++..|. +
T Consensus 35 f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~----~----~~~~~l~i~~G~fg~r~~~~a~~~g~-~ 105 (349)
T TIGR01364 35 FEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL----A----EGKVADYIVTGAWSKKAAKEAKKYGV-V 105 (349)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC----C----CCCeEEEEECCHHHHHHHHHHHHhCC-c
Confidence 45788899999999999742 45667778888876655432 1 234555432 222211 122667888 7
Q ss_pred EEEcCCCCC----CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCC
Q 001579 705 VSVGTDAKG----NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1050)
Q Consensus 705 v~V~~d~~g----~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p 779 (1050)
+.+..++.+ .+|+++++ ++ ++++.|.+++- +.+|+.. + ++++.+|++++||+++..+...+ ..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~v~~th~ETstGv~~-~-----~l~~~~~~l~iVDavss~g~~~i-d~ 173 (349)
T TIGR01364 106 NVVASGKEGNYTKIPDPSTWE--IS---EDAAYVHYCANETIHGVEF-R-----ELPDVKNAPLVADMSSNILSRPI-DV 173 (349)
T ss_pred EEEeccccCCCCCCCCHHhcC--CC---CCCCEEEEcCCCCcccEec-c-----eecccCCCeEEEEccccccCccC-CH
Confidence 777765333 45666555 22 57788888775 5689976 3 66777899999999864332211 12
Q ss_pred CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCC---CCCCCCCCCCCCCcchhhhHHHHHHH
Q 001579 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI---PAPEKSQPLGTIAAAPWGSALILPIS 856 (1050)
Q Consensus 780 g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~---~~~~~~~~t~~i~sa~~g~~~~~~~a 856 (1050)
. ..|+++++.||+|+ | ||+|++++++++.+.++..... ..+. ...+....|+++. .+.+.
T Consensus 174 ~--~~d~~~~ssqK~lg-P-----~Glg~l~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Tp~~~--------~i~al 236 (349)
T TIGR01364 174 S--KFGLIYAGAQKNIG-P-----AGLTVVIVRKDLLGRASRITPS-MLNYKIHAENDSMYNTPPTF--------AIYVS 236 (349)
T ss_pred H--HccEEEEecccccC-C-----CceEEEEECHHHHhhcccCCCC-cchHHHHHhcCCCCCCCcHH--------HHHHH
Confidence 2 35699999999884 3 6899999998877665332111 0100 0000001122221 22233
Q ss_pred HHHHHHHChh-hHHHHHHHHHHHHHHHHHHHhccCCe--eecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 001579 857 YTYIAMMGSK-GLTEASKIAILNANYMAKRLEKHYPI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (1050)
Q Consensus 857 ~a~l~~lG~e-Gl~~~a~~~~~~a~yl~~~L~~~~~v--~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~ 933 (1050)
.+.+.++-++ |+.++.++...+++++.+.|+++-.+ ....+..+....+.|.++. .+. ..++.+.+.++|+.
T Consensus 237 ~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~----~~~-~~~~~~~~~~~Gi~ 311 (349)
T TIGR01364 237 GLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGN----EEL-EKRFLKEAEERGLV 311 (349)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCC----hhH-hHHHHHHHHHCCCc
Confidence 4556667677 79999999999999999999986222 1111111111112333331 012 25666778889996
Q ss_pred cCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 934 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 934 ~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
+..... ..+++|+++..++|+||||+|+++|+++.+
T Consensus 312 ~~~~~~-~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 312 SLKGHR-SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred ccCCcc-ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 543321 247999999999999999999999998764
No 312
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.60 E-value=3.1e-13 Score=157.50 Aligned_cols=294 Identities=15% Similarity=0.156 Sum_probs=179.8
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ee-eeccCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~-~l~~~sGa-~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
+|..++.+.+.+++.+..|.+ .. .+..+.|+ ++.. ++++.+. .++++|++++..++.+...++..|.+
T Consensus 67 ~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~---~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~G~~ 138 (383)
T TIGR03540 67 EGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIA---HIPLAFV-----NPGDIVLVPDPGYPVYRIGTLFAGGE 138 (383)
T ss_pred CCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHH---HHHHHhC-----CCCCEEEEeCCCCcchHHHHHhcCCE
Confidence 576677777777777666663 22 34444444 3332 2333331 24678999988776666678899999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccccC
Q 001579 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLT 777 (1050)
Q Consensus 704 vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~gl~ 777 (1050)
++.++++++ ..+|++++++++. +++++|++++| |.+|.+. +.+++|+++|+++|+++++|.++..- ..+..
T Consensus 139 v~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~ 215 (383)
T TIGR03540 139 PYEMPLKEENGFLPDFDAIPEDIA---KKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYK 215 (383)
T ss_pred EEEEecCcccCCccCHHHHHhhcc---ccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCC
Confidence 999999754 3579999999886 68899999998 5789875 24899999999999999999986311 11111
Q ss_pred CC--Cc----ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHH
Q 001579 778 SP--GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1050)
Q Consensus 778 ~p--g~----~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1050)
.+ .. ..-.+...++.|+|+.| |.++|++..++++...+... +.....+.+. .
T Consensus 216 ~~~~~~~~~~~~~~i~~~SfSK~~g~~----GlRiG~~i~~~~l~~~~~~~------------~~~~~~~~~~------~ 273 (383)
T TIGR03540 216 APSFLEVDGAKDVGIEFHSLSKTYNMT----GWRIGMAVGNADLIAGLGKV------------KTNVDSGVFQ------A 273 (383)
T ss_pred CcCcccCCCcccCEEEEEecccccCCc----cceeeEEeCCHHHHHHHHHH------------HHhcccCCCh------H
Confidence 11 11 12336677888988533 67799999887765543210 0000011111 1
Q ss_pred HHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HC
Q 001579 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1050)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~ 930 (1050)
...++..++. .+.+-+++..+...++.+++.+.|++. .+.+..+.+.++ ++++++ .+.+..+++++|. ++
T Consensus 274 ~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~--~~~~l~-----~~~~~~~~~~~ll~~~ 344 (383)
T TIGR03540 274 IQYAAIAALN-GPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKPKATFY--VWVPVP-----EGYTSAEFAARLLEET 344 (383)
T ss_pred HHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCCCcceE--EEEECC-----CCCCHHHHHHHHHHHC
Confidence 1111222222 233445555556667788899999875 332222222221 345554 2467789999875 78
Q ss_pred CcccCCC-CCCC--CCEEEEEcCCCCCHHHHHHHHHHH
Q 001579 931 GFHGPTM-SWPV--PGTLMIEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 931 Gi~~~~~-~~pv--~~~lrI~~te~~t~eeid~fv~aL 965 (1050)
||.+... .|+. .+++||++. .+.+++++.++.|
T Consensus 345 gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l 380 (383)
T TIGR03540 345 GVVVTPGVGFGEYGEGYIRISLT--VPDERLEEAVARI 380 (383)
T ss_pred CEEEecchhhCccCCCeEEEEec--CCHHHHHHHHHHH
Confidence 9986532 3442 468999986 3455555544444
No 313
>PRK07550 hypothetical protein; Provisional
Probab=99.60 E-value=2.7e-13 Score=158.22 Aligned_cols=349 Identities=12% Similarity=0.107 Sum_probs=203.6
Q ss_pred HHHHHHHHHHhccccCcccccccccccccCcchhhhhcccccc--ccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC
Q 001579 571 HELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWP--SFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD 648 (1050)
Q Consensus 571 ~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~--~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d 648 (1050)
.++.+.+.++++.+. .++.||++.+..+........... .-.....|.+ .+|..++.+.+.+++.+..|..
T Consensus 15 ~~~~~~~~~~~~~~~----~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~~lr~~ia~~~~~~~g~~ 87 (386)
T PRK07550 15 PEVRAWLAGYDGADG----PLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGP---VEGLPELREAYAAHYSRLYGAA 87 (386)
T ss_pred HHHHHHHHHHhhcCC----CeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCC---CCCCHHHHHHHHHHHHHHhCCC
Confidence 566667777765443 356777766554432221111000 0001122333 3577777777777777776643
Q ss_pred --eeeeccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC-C-CCCCHHHHHHH
Q 001579 649 --SFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-K-GNINIEELRKA 723 (1050)
Q Consensus 649 --~~~l~~~sG-a~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~-~-g~iD~e~L~~~ 723 (1050)
...+..++| ++|.. ++++.+. .++++|+++...+..+...++..|++++.++.++ + +.+|+++|+++
T Consensus 88 ~~~~~i~~t~G~~~al~---~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~ 159 (386)
T PRK07550 88 ISPEQVHITSGCNQAFW---AAMVTLA-----GAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEAL 159 (386)
T ss_pred CCcceEEEecCcHHHHH---HHHHHhc-----CCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHH
Confidence 233444445 44432 2333321 2467899998877667777889999999999975 3 46899999999
Q ss_pred HHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEeccccccccccCCC---C---cccC-cEEEeCCcc
Q 001579 724 AEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP---G---YIGA-DVCHLNLHK 793 (1050)
Q Consensus 724 i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p---g---~~Ga-Dv~~~~~hK 793 (1050)
++ +++++|++++|+ .+|.+. +++++|+++|+++|+++++|.++..-......+ . +.+. .+++.+++|
T Consensus 160 ~~---~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 236 (386)
T PRK07550 160 IT---PRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSK 236 (386)
T ss_pred hc---ccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchh
Confidence 97 678888888885 688764 258999999999999999999853211000111 1 1122 255778899
Q ss_pred ccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHH
Q 001579 794 TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASK 873 (1050)
Q Consensus 794 tf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~ 873 (1050)
+|+.| |.++|++++++++...+-.. . .....+.+..++.. +...+..+ ++-+++..+
T Consensus 237 ~~g~~----G~RiG~i~~~~~~~~~~~~~-~-------------~~~~~~~s~~~q~~----~~~~l~~~-~~~~~~~~~ 293 (386)
T PRK07550 237 SYALT----GHRVGAVVASPARIAEIEKF-M-------------DTVAICAPRIGQIA----VAWGLPNL-ADWRAGNRA 293 (386)
T ss_pred hccCc----ccceEeeecCHHHHHHHHHH-H-------------hhcccCCCcHHHHH----HHHHhccH-HHHHHHHHH
Confidence 98644 67899999887655433110 0 00111111222221 11122211 222334444
Q ss_pred HHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCCcccCC-CCCC--CCCEEEEEc
Q 001579 874 IAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGPT-MSWP--VPGTLMIEP 949 (1050)
Q Consensus 874 ~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~Gi~~~~-~~~p--v~~~lrI~~ 949 (1050)
...++.+++.+.|+++..+.... .+.. -+++.++. .+.+..+++++|. ++|+.+.. ..|. ..+.+||++
T Consensus 294 ~~~~~~~~l~~~L~~~~~~~~~~-~g~~--~~~~~~~~----~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~ 366 (386)
T PRK07550 294 EIARRRDAFRAVFARLPGWELLA-SGAY--FAYVRHPF----PDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAF 366 (386)
T ss_pred HHHHHHHHHHHHHHhCCCceeCC-CceE--EEEecCCC----CCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEe
Confidence 55567788888887642221111 2222 13445431 1467889999875 68998643 2232 146899999
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 001579 950 TESESKEELDRYCDALISI 968 (1050)
Q Consensus 950 te~~t~eeid~fv~aL~~i 968 (1050)
.. .+.+++++.++.|.+.
T Consensus 367 ~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 367 AN-ADVAGIGELVERLRAF 384 (386)
T ss_pred ec-CCHHHHHHHHHHHHhh
Confidence 74 3578888888887653
No 314
>PRK09148 aminotransferase; Validated
Probab=99.60 E-value=3e-13 Score=158.97 Aligned_cols=308 Identities=12% Similarity=0.093 Sum_probs=185.5
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++.+..|.+ .. .+..++|++. +..++++.+. .+++.|++++..+..+...+...|.++
T Consensus 68 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~v 140 (405)
T PRK09148 68 KGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKE--GFANMAQAIT-----APGDVILCPNPSYPIHAFGFIMAGGVI 140 (405)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH--HHHHHHHHhc-----CCCCEEEEcCCCCcccHHHHHhcCCEE
Confidence 577777777777777666753 33 4555555542 2223333331 245789999887777766778899999
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc--cCC
Q 001579 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--LTS 778 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~g--l~~ 778 (1050)
+.++.+.++. ++++++++++++.+++++|++++| |.+|.+. +.+++|+++|+++|+++++|.++..- ..+ +..
T Consensus 141 ~~v~~~~~~~-~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s 219 (405)
T PRK09148 141 RSVPAEPDEE-FFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPS 219 (405)
T ss_pred EEEeCCCCCC-CccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCC
Confidence 9999876542 456677777655578999999999 5789875 24688999999999999999986421 111 111
Q ss_pred CCcc----cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHH
Q 001579 779 PGYI----GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1050)
Q Consensus 779 pg~~----GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1050)
...+ +..+++.+++|+|++| |.++|++++++++...+.. . +...+.+.+...+.
T Consensus 220 ~~~~~~~~~~~i~~~SfSK~~~~p----GlR~G~~v~~~~~i~~l~~-~-------------~~~~~~~~~~~~q~---- 277 (405)
T PRK09148 220 VLQVPGAKDVTVEFTSMSKTFSMA----GWRMGFAVGNERLIAALTR-V-------------KSYLDYGAFTPIQV---- 277 (405)
T ss_pred hhhCCCccCcEEEEeccccccCCc----chheeeeeCCHHHHHHHHH-H-------------HHHhccCCChHHHH----
Confidence 1111 2235578889998755 6789999988766554321 0 00001111111121
Q ss_pred HHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCCc
Q 001579 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGF 932 (1050)
Q Consensus 855 ~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~Gi 932 (1050)
++...+. -+.+-+++..+...++.+++.+.|++. +.+ ..+.+..+ +.+++++. ..+.+..++++.|. ++|+
T Consensus 278 ~~~~~L~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~--~~p~~g~f--~~~~l~~~--~~~~~~~~~~~~ll~~~gV 350 (405)
T PRK09148 278 AATAALN-GPQDCIAEMRELYKKRRDVLVESFGRAGWDI--PPPAASMF--AWAPIPEA--FRHLGSLEFSKLLVEKADV 350 (405)
T ss_pred HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHcCCcc--CCCCeeEE--EEEECCCc--cCCCCHHHHHHHHHHhCCE
Confidence 1112221 123334555566667788888988874 332 11222221 34555421 01234578888876 7899
Q ss_pred ccC-CCCCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 933 HGP-TMSWPV--PGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 933 ~~~-~~~~pv--~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
.+. ...|+. .+++||++. .+.+++++.++.|.+++.+..+
T Consensus 351 ~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 351 AVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred EEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHHHH
Confidence 864 333432 478999986 4566777777777666665544
No 315
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=3.5e-13 Score=158.99 Aligned_cols=322 Identities=15% Similarity=0.200 Sum_probs=196.8
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCC---CeeeeccCchHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF---DSFSLQPNAGAAGEYAGLMVI 668 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~---d~~~l~~~sGa~ge~a~Llai 668 (1050)
..+|++.+++..++..+. ....+..+..+ + .+...++.+.|++++.. +.+ ++.+||+++++++++.+
T Consensus 52 ~~lGh~~p~v~~ai~~ql-~~~~~~~~~~~-~-------~~~~~~la~~l~~~~p~~~~~~~-~f~~sGseA~e~AlklA 121 (421)
T PRK06777 52 LNTGHRHPKVVAAVRQQL-DQFTHTAYQIV-P-------YASYVTLAERINALAPIDGPAKT-AFFTTGAEAVENAVKIA 121 (421)
T ss_pred hccCCCCHHHHHHHHHHH-hhccccccccc-C-------ChHHHHHHHHHHHhCCCCCCceE-EEeCCcHHHHHHHHHHH
Confidence 467888888777766653 22111111001 1 12234777888888753 334 55689999999998888
Q ss_pred HHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC-------------EEEEEcCCCC--C---CCCHHHHHHHHHc--C
Q 001579 669 RAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDAK--G---NINIEELRKAAEA--N 727 (1050)
Q Consensus 669 r~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~-------------~vv~V~~d~~--g---~iD~e~L~~~i~~--~ 727 (1050)
|.| . +|++|+ ...++||....+....|. .+..++.... + ..|++++++.+++ +
T Consensus 122 r~~---t---gr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 195 (421)
T PRK06777 122 RAY---T---GRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIA 195 (421)
T ss_pred HHh---h---CCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccC
Confidence 876 2 344555 577899988766543321 1223333211 1 1246778888864 4
Q ss_pred CCCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCc------cc--CcEEEeCCcccc
Q 001579 728 RDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHLNLHKTF 795 (1050)
Q Consensus 728 ~~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~------~G--aDv~~~~~hKtf 795 (1050)
.+++++|+++.. +..|+.. +.+++|.++|+++|+++++|.++ .|+.+.|. +| +|++++ .|.+
T Consensus 196 ~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~----tg~gr~g~~~~~~~~~~~pDiv~~--sK~l 269 (421)
T PRK06777 196 PDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQ----TGFARTGKLFAMEYYDVKPDLITM--AKSL 269 (421)
T ss_pred CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh----hCCccCCchhhhhhcCCCCCEEee--ehhh
Confidence 567888888653 3456543 34999999999999999999874 34444432 23 687764 5877
Q ss_pred ccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHH
Q 001579 796 CIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIA 875 (1050)
Q Consensus 796 ~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~ 875 (1050)
+ ||..+|.+++++++.+.+.... ..+. +.|++..++++.+.+..+..+.+ .++.
T Consensus 270 ~-----~G~pigav~~~~~i~~~~~~~~--------------~~~T----~~~~p~~~aaa~a~L~~~~~~~l---~~~~ 323 (421)
T PRK06777 270 G-----GGMPISAVVGRAEVMDAPAPGG--------------LGGT----YAGNPLAVAAALAVLDVIAEEKL---CQRA 323 (421)
T ss_pred c-----CCCceEEEEEcHHHHhccCCCC--------------CCCC----CCcCHHHHHHHHHHHHHHHhccH---HHHH
Confidence 4 4567899999988766542110 0011 22455566667777777655443 4455
Q ss_pred HHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEecccccccCCCC----HHHHHHHHHHCCcccCCC-CCCCCCEE
Q 001579 876 ILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIE----PEDVAKRLMDYGFHGPTM-SWPVPGTL 945 (1050)
Q Consensus 876 ~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~----~~~vakrL~d~Gi~~~~~-~~pv~~~l 945 (1050)
..+.++|.++|+++ ++++ ..| .|.. +.+.+.. . ..+.+ ...+.+.|.++|+.+... .| ++.+
T Consensus 324 ~~~g~~l~~~L~~l~~~~~~i~~vrg-~G~~---~~i~~~~-~-~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~--g~~l 395 (421)
T PRK06777 324 LILGAHLVEVLEKAKASCPAIVDIRA-RGSM---VAVEFND-P-QTGKPSPEFTRQYQRQALEEGLLLLSCGVH--GNVI 395 (421)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEecC-ceEE---EEEEEec-C-ccCCccHHHHHHHHHHHHhCCeEEeecCCC--CCEE
Confidence 57788999999875 3321 122 2322 2222211 0 01111 245566678899987432 22 4789
Q ss_pred EEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 946 MIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 946 rI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
||.|+...+++++|+.++.|.+.+
T Consensus 396 r~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 396 RFLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999998775
No 316
>PRK10534 L-threonine aldolase; Provisional
Probab=99.60 E-value=3.9e-14 Score=161.81 Aligned_cols=282 Identities=12% Similarity=0.143 Sum_probs=167.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCc-cHHH-HHhC-CCEEEEEcCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPAT-AAMC-GMKIVSVGTD 710 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt-~pa~-a~~~-G~~vv~V~~d 710 (1050)
..++++.+++++|.+.+.+ .++|++++...+++. .. ++++|+++.+.|.. +... +... +.+++.++++
T Consensus 36 ~~~L~~~la~~~g~~~~~v-~~~g~~a~~~~l~~~----~~----~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (333)
T PRK10534 36 VNALQDYAAELSGKEAALF-LPTGTQANLVALLSH----CE----RGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA 106 (333)
T ss_pred HHHHHHHHHHHhCCCeEEE-eCchHHHHHHHHHHh----cC----CCCeeEEechhhhhHhcCCchHHhcCceEEeecCC
Confidence 4588999999999987744 445665564333322 11 45678887766632 1111 2333 3788888888
Q ss_pred CCCCCCHHHHHHHHHcC---CCCEEEEEEEcCCCccccc--cCHHHHHHHHHHcCCEEEEecccccccc-ccCCC-C--c
Q 001579 711 AKGNINIEELRKAAEAN---RDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSP-G--Y 781 (1050)
Q Consensus 711 ~~g~iD~e~L~~~i~~~---~~~taaV~vt~Pn~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~-gl~~p-g--~ 781 (1050)
+++.+|+++|+++++++ ..++++|++++|++ |.+. +++++|+++|+++|++|++|+|+...-. ....+ . .
T Consensus 107 ~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~-G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~ 185 (333)
T PRK10534 107 ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHN-GKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT 185 (333)
T ss_pred CCCCCCHHHHHHhhcccCcCcccceEEEEecCCC-CeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH
Confidence 78999999999999621 01688999999886 8764 2467778899999999999997542110 00111 1 1
Q ss_pred ccCcEEEeCCccccccCCCCCCCcce-eeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHH
Q 001579 782 IGADVCHLNLHKTFCIPHGGGGPGMG-PIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1050)
Q Consensus 782 ~GaDv~~~~~hKtf~~P~g~GGPg~G-~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1050)
.+.|.++.+++|.|+++ +| +++.+++++..+... +.....++.. .+..++++.+.+
T Consensus 186 ~~~~~~~~s~SK~~~~~-------~G~~~~~~~~~i~~~~~~------------~~~~~~~~~~----~~~~~a~~~~~l 242 (333)
T PRK10534 186 QYCDSFTICLSKGLGTP-------VGSLLVGNRDYIKRARRW------------RKMTGGGMRQ----AGILAAAGLYAL 242 (333)
T ss_pred hcCCEEEEEeEcCCCCc-------ccceEEcCHHHHHHHHHH------------HHHhCCchhh----HHHHHHHHHHHH
Confidence 13475556789988644 34 565566665443210 0000001110 111111122222
Q ss_pred HHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC
Q 001579 861 AMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1050)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~ 939 (1050)
.. ..+..++...+++++.++|++. +++. + + ..+-+.++++ +.+..++.+.|.++||.+...
T Consensus 243 ~~-----~~~~~~~~~~~r~~l~~~L~~~g~~~~-~-~---~~nfv~~~~~------~~~~~~~~~~l~~~gi~v~~~-- 304 (333)
T PRK10534 243 KH-----NVARLQEDHDNAAWLAEQLREAGADVM-R-Q---DTNMLFVRVG------EEQAAALGEYMRERNVLINAS-- 304 (333)
T ss_pred Hh-----hHHHHHHHHHHHHHHHHHHHhCCCccC-C-C---CceEEEEECC------chhHHHHHHHHHHcCeeecCC--
Confidence 11 1222333445678999999885 4432 1 1 2222344543 124578889999999998522
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 940 PVPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 940 pv~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
..+|++.+..+|++++++++++|++++
T Consensus 305 ---~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 305 ---PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred ---ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 247887766678999999999998664
No 317
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.60 E-value=7.8e-14 Score=162.94 Aligned_cols=213 Identities=20% Similarity=0.102 Sum_probs=155.4
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---h
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~ 289 (1050)
..++++.++++.|.+ ++.++.+||+++.++++++ +. +||+||+++..|+.+...+...+...|++++.++. +
T Consensus 67 ~~~Le~~lA~l~g~~--~~l~~~sgt~Ai~~~l~al-~~--~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~ 141 (394)
T PRK07050 67 SLALAQRLAEIEGGR--HALLQPSGLAAISLVYFGL-VK--AGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGA 141 (394)
T ss_pred HHHHHHHHHHHhCCC--eEEEeccHHHHHHHHHHHH-hC--CCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHH
Confidence 345778999999976 4888899999888877765 33 89999999999999887766556778999999875 4
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ +.++|++|++.+| |.+|.+.|+++|+++||++|++++++ +.++.+....|.++|+||++.|. |.+++ .|
T Consensus 142 ~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD-~a~a~~~~~~~l~~GaDi~v~S~tK~~~g---~~ 217 (394)
T PRK07050 142 GIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAID-NTYSAGLAFKPFEHGVDISVQALTKYQSG---GS 217 (394)
T ss_pred HHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEE-CCcccccccCHHHcCCeEEEEECCceecC---CC
Confidence 5666 7889999999998 78899999999999999999999994 45666766678889999999997 88753 12
Q ss_pred CcceEEEEE-ehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001579 367 GPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1050)
Q Consensus 367 GP~~G~la~-~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1050)
+.-+|.+.+ ++++.+++- ..|..-|. |. .+. ..|+...|-+.+..
T Consensus 218 ~~~gG~v~~~~~~~~~~~~-------------------------~~~~~~G~---~~-~~~-----~a~l~lr~l~tl~~ 263 (394)
T PRK07050 218 DVLMGATITADAELHAKLK-------------------------LARMRLGI---GV-SAD-----DCSLVLRGLPSLQV 263 (394)
T ss_pred CeeEEEEEECCHHHHHHHH-------------------------HHHHhcCC---CC-CHH-----HHHHHHcCCCcHHH
Confidence 222344444 455544330 01111110 10 111 12445566667777
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Q 001579 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
..++.+++|..+++.|++...+.
T Consensus 264 Rl~~~~~~a~~la~~L~~~p~v~ 286 (394)
T PRK07050 264 RLAAHDRSALEVAEWLKARPEIA 286 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcc
Confidence 77888899999999999874343
No 318
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.60 E-value=4.3e-14 Score=163.78 Aligned_cols=279 Identities=10% Similarity=0.123 Sum_probs=174.0
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~ 714 (1050)
.++++.+++.+|.+...+..++|++. +..++++.+. .++++|+++...+..+...+.+.|++++.|+.+ ++.
T Consensus 67 ~~Lr~aia~~~~~~~~~I~vt~Gs~e--~i~~~~~~l~-----~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~ 138 (366)
T PRK01533 67 TTLRQTIANKLHVKMEQVLCGSGLDE--VIQIISRAVL-----KAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGV 138 (366)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHH--HHHHHHHHhc-----CCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCC
Confidence 46778888888988766666666542 3333444432 245789998875555555688899999999986 456
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccccc--ccCCC--C--cccCc
Q 001579 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV--GLTSP--G--YIGAD 785 (1050)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~--gl~~p--g--~~GaD 785 (1050)
+|+++|+++++ +++++|++++| |.+|.+. +.+++|+++|++++ ++++|.++..-.. ....+ . ..+--
T Consensus 139 ~d~~~l~~~~~---~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~v 214 (366)
T PRK01533 139 YDLDEISSVVD---NDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNI 214 (366)
T ss_pred cCHHHHHHHhC---cCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCE
Confidence 99999999986 67889999999 4799886 13555555665655 6788987531110 00010 0 11223
Q ss_pred EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHCh
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1050)
Q Consensus 786 v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1050)
+++.++.|+|++| |.++|++++.+++...+-.. ....+++ ...+. ++.+++. ..
T Consensus 215 i~~~SfSK~~~l~----GlRiG~~i~~~~~~~~l~~~--------------~~~~~~~--~~~q~----aa~~~l~--~~ 268 (366)
T PRK01533 215 LVLRTFSKAYGLA----SFRVGYAVGHEELIEKLNVV--------------RLPFNVS--SLAQK----AATIAFG--DD 268 (366)
T ss_pred EEEeCchHHhcCh----HHHHhHHhCCHHHHHHHHHh--------------cCCCCcC--HHHHH----HHHHHhC--CH
Confidence 6677788888654 78899999877665543210 0011121 11121 1222221 22
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 001579 866 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1050)
Q Consensus 866 eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~ 944 (1050)
+-+++..+...++.+++.+.|+.. +++ +. +.+.+ +.+.++ +..++.++|.++||.+.. | +++
T Consensus 269 ~~~~~~~~~~~~~r~~~~~~l~~~g~~~-~~-~~~nf---~~~~~~--------~~~~~~~~l~~~GI~Vr~--~--~~~ 331 (366)
T PRK01533 269 EFIEEIVRVNTEGLRQYESFCKENEIPF-YQ-SQTNF---IFLPVE--------NGGEIYEACAHAGFIIRP--F--PNG 331 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcc-CC-CcCcE---EEEeCC--------CHHHHHHHHHHCCcEEcc--C--CCc
Confidence 223444455556666777777654 333 22 22322 345542 356899999999999875 3 478
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 945 LMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 945 lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
+||++ -+.+|+++|+++|+++++.
T Consensus 332 iRis~---~~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 332 VRITV---GTREQNEGVISVLQQHFEN 355 (366)
T ss_pred eEEeC---CCHHHHHHHHHHHHHHHHh
Confidence 99997 4689999999999987544
No 319
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.60 E-value=1.3e-13 Score=167.74 Aligned_cols=298 Identities=15% Similarity=0.139 Sum_probs=193.9
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC-
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~- 712 (1050)
+.|.|+..++++|.|.+.+..|+++.|+.++++++. +++++||++.+.|-+......+.|++.+.++...+
T Consensus 197 i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~--------~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~ 268 (714)
T PRK15400 197 HKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSA--------PAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNA 268 (714)
T ss_pred HHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeEEEecccccc
Confidence 779999999999999988888988888877766543 25689999999998887788999999999976433
Q ss_pred ----CCCC-----HHHHHHHHHcCCCCEE---EEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCC--
Q 001579 713 ----GNIN-----IEELRKAAEANRDNLS---TLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-- 778 (1050)
Q Consensus 713 ----g~iD-----~e~L~~~i~~~~~~ta---aV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~-- 778 (1050)
|.++ .+.++++|+++. +.+ ++++|+|++.|++. |+++|.+++|.++ ++||.|+.. ...|..
T Consensus 269 ~Gi~g~I~~~~~~~e~i~~~i~~~p-~ak~p~~~vit~pTYdG~~y-d~~~I~~~~~~~~--ilvDEAwga-h~~F~p~~ 343 (714)
T PRK15400 269 YGILGGIPQSEFQHATIAKRVKETP-NATWPVHAVITNSTYDGLLY-NTDFIKKTLDVKS--IHFDSAWVP-YTNFSPIY 343 (714)
T ss_pred cCCccCCCccccCHHHHHHHHHhCc-cccCccEEEEECCCCccEec-CHHHHHHHhCCCC--EEEEccchh-hhccCccc
Confidence 4566 899999998764 333 79999999999998 8999999999987 689998642 222211
Q ss_pred C----CcccC---c--EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCC-CCCCCcchhh
Q 001579 779 P----GYIGA---D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQP-LGTIAAAPWG 848 (1050)
Q Consensus 779 p----g~~Ga---D--v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~-t~~i~sa~~g 848 (1050)
| -..|+ | +++-|.||+++.- -..+.|-++.. +.-..+. .... ...+| ..|.
T Consensus 344 ~~~sam~~ga~~~~~i~vtQStHKtL~al-----TQaS~LHvkg~----vd~~~~n---------~a~~m~~STS-PsY~ 404 (714)
T PRK15400 344 EGKCGMSGGRVEGKVIYETQSTHKLLAAF-----SQASMIHVKGD----VNEETFN---------EAYMMHTTTS-PHYG 404 (714)
T ss_pred CCcChhhcCCCCCCceEEEEchhhcccch-----hHHhHHHHcCC----CCHHHHH---------HHHHHHcCCC-cHHH
Confidence 1 12456 5 9999999998521 12233433221 1100000 0000 01111 1222
Q ss_pred hHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--------CCeeec------------------CC-----
Q 001579 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--------YPILFR------------------GV----- 897 (1050)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--------~~v~~~------------------g~----- 897 (1050)
....+-.|.++|. |+.| ++..+..+..+..++++|.++ +.+.-+ |-
T Consensus 405 l~ASLD~a~~~m~--~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~ 481 (714)
T PRK15400 405 IVASTETAAAMMK--GNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDN 481 (714)
T ss_pred HHHHHHHHHHHHH--hhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccc
Confidence 2222333333332 2234 334556667777788888654 122100 00
Q ss_pred ----CCccceeEEEecccccc-----cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 898 ----NGTVAHEFIVDLRGLKN-----TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 898 ----~g~~~~e~i~~~~~~~~-----~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
-+|. -+++.++.+.. +.|+++..+++.|.++||.+-... ...+.+.+|...|++++++++++|.++
T Consensus 482 ~~~~lDP~--Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d---~~~iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 482 EHMYLDPI--KVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTG---PYNLLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred cccccCCc--eEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecC---CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 0111 12333332211 257889999999999999875433 467888899999999999999999988
Q ss_pred HHH
Q 001579 969 REE 971 (1050)
Q Consensus 969 ~~e 971 (1050)
.+.
T Consensus 557 ~~~ 559 (714)
T PRK15400 557 KRA 559 (714)
T ss_pred HHh
Confidence 544
No 320
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.60 E-value=3.6e-13 Score=159.35 Aligned_cols=322 Identities=15% Similarity=0.134 Sum_probs=194.0
Q ss_pred ccccccccCcchhhhhc-cccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC--CCeeeeccCchHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMM-PVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG--FDSFSLQPNAGAAGEYAGLMVI 668 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~-~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G--~d~~~l~~~sGa~ge~a~Llai 668 (1050)
..+|++.+++..++..+ ....-.+.. .+.. ....++.+++.+.+++++. ++. .++.+||++++++++..+
T Consensus 70 ~~lGh~~p~i~~Ai~~q~~~~~l~~~~--~~~~----~~~~~la~~l~~~l~~~~p~~~~~-v~f~~SGsEAvE~AlKlA 142 (464)
T TIGR00699 70 IPIGYNNPALLKAAQSPEMATTLINRP--ALGN----FPSKDWAKILKEGILKVAPKGQDQ-VWTGMSGSDANELAFKAA 142 (464)
T ss_pred hcCCCCCHHHHHHHHHHHHHHhhcccc--cCCc----HHHHHHHHHHHHhHHhhCCCCcCE-EEEeCCcHHHHHHHHHHH
Confidence 45678877777766652 111000000 0110 1122334444444556664 344 367799999999999999
Q ss_pred HHHHHhcCC-------------------CC--CCEEE-EcCCCCCccHHHHHhCCC-----------EEEEEcCCCC---
Q 001579 669 RAYHKARGD-------------------HH--RNVCI-IPVSAHGTNPATAAMCGM-----------KIVSVGTDAK--- 712 (1050)
Q Consensus 669 r~y~~~~G~-------------------~~--r~~Vl-ip~saHgt~pa~a~~~G~-----------~vv~V~~d~~--- 712 (1050)
|.|+..+|. ++ |.+|| ...++||....+....|- .+..+|+...
T Consensus 143 r~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~ 222 (464)
T TIGR00699 143 FMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYP 222 (464)
T ss_pred HHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccc
Confidence 888643321 01 22455 577999988766443221 1223332210
Q ss_pred -----------CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccC
Q 001579 713 -----------GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLT 777 (1050)
Q Consensus 713 -----------g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~ 777 (1050)
..-++++|++.++++.+++++|+++.. +..|++.+ .+++|+++|+++|+++|+|.+ +.|+.
T Consensus 223 ~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV----~tGfG 298 (464)
T TIGR00699 223 LEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEV----QTGVG 298 (464)
T ss_pred cccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeee----eeCCC
Confidence 012467788899877778999998754 34576651 399999999999999999986 46666
Q ss_pred CCCcc------c----CcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchh
Q 001579 778 SPGYI------G----ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1050)
Q Consensus 778 ~pg~~------G----aDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~ 847 (1050)
+.|.+ | +|++++ .|.++ +|| ++..++.+.+. +. ....+++.
T Consensus 299 rtG~~fa~e~~gv~~~PDi~t~--gK~lg----~gG----~~~~~~~~~~~--~~-----------------~~~~~T~~ 349 (464)
T TIGR00699 299 ATGKFWAHEHWNLDDPPDMVTF--SKKFQ----TAG----YFFHDPAFRPN--KP-----------------YRQFNTWM 349 (464)
T ss_pred CCcchhHHHhcCCCCCCCEEEe--hhhhc----cCC----ccccchhccCC--CC-----------------cccccCCC
Confidence 66642 3 888877 58773 222 22222211110 00 00112345
Q ss_pred hhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc---CC-ee--ec--CCCCccceeEEEecccccccCCCC
Q 001579 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YP-IL--FR--GVNGTVAHEFIVDLRGLKNTAGIE 919 (1050)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~-v~--~~--g~~g~~~~e~i~~~~~~~~~~g~~ 919 (1050)
|++..++++.+.|..+-.+++.+. .....++|.++|+++ ++ ++ .. | .|.. +-+++.. ...
T Consensus 350 gnp~~~aaa~a~L~~l~~~~l~~~---~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G-~Glm---~gie~~~-----~~~ 417 (464)
T TIGR00699 350 GDPSRALILREIIQEIKRKDLLEN---VAHVGDYLYTGLEDLQKKYPEFIQNLRGKG-RGTF---IAWDTPD-----EAK 417 (464)
T ss_pred CCHHHHHHHHHHHHHHHhcCHHHH---HHHHHHHHHHHHHHHHHhCCCceeeecccC-eEEE---EEEecCC-----HHH
Confidence 677778888888888876665543 345677888888764 44 21 11 2 1211 2233321 112
Q ss_pred HHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 920 PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 920 ~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
...+.+.|.++|+.+.... .+.||+.|+..+|++|||.++++|.++
T Consensus 418 ~~~i~~~~~~~Gvl~~~~g---~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 418 RDKLLKKARNNGVNIGGCG---VKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred HHHHHHHHHHCCcEEecCC---CCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 4678899999999986432 368999999999999999999999875
No 321
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.60 E-value=9.8e-14 Score=161.32 Aligned_cols=217 Identities=17% Similarity=0.149 Sum_probs=149.4
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|.++..++++++. .++++|+++...|+..... ....|++++.++.
T Consensus 55 ~~~Le~~lA~leg~e~i-vvt~gg~~Ai~~~l~all--------~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 125 (388)
T PRK08861 55 RGLLEQTLSELESGKGA-VVTNCGTSALNLWVSALL--------GPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ 125 (388)
T ss_pred HHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHHc--------CCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC
Confidence 45788999999998765 455677766644443321 2467899988766643322 2345788888763
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|.++.. +.+..|-++|+|+++
T Consensus 126 -----~d~e~l~~~i~---~~tklV~lesP~NPtG~v~-dl~~I~~la~~~gi~vIvDea~~~--~~~~~pl~~GaDivv 194 (388)
T PRK08861 126 -----SDAAALDAALA---KKPKLILLETPSNPLVRVV-DIAELCQKAKAVGALVAVDNTFLT--PVLQKPLELGADFVI 194 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCccc--cccCCCcccCCCEEE
Confidence 58999999997 78999999999 5789887 799999999999999999988643 234578888999999
Q ss_pred eCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.++||+++.| ++--.|++.+++ ++.+.+.. . ...++...+ |+ -+|+...|-+-
T Consensus 195 ~S~tK~l~G~---~d~~gG~i~~~~~~~~~~~~~----~---------~~~~G~~~~-p~---------~a~l~~rgl~T 248 (388)
T PRK08861 195 HSTTKYINGH---SDVIGGVLITKTKEHAEELAW----W---------GNCIGATGT-PF---------DSYMTLRGIRT 248 (388)
T ss_pred eecceeccCC---CcceeEEEEecHHHHHHHHHH----H---------HhccCCCCC-hH---------HHHHHHhcCCC
Confidence 9999999522 111257776653 33322210 0 011122221 22 13456667677
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 868 LTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
|.-+.++..++|..+++.|+++ -.|.|+|
T Consensus 249 l~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~ 280 (388)
T PRK08861 249 LGARMRVHEESAQQILAYLQTQSLVGTIYHPS 280 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCC
Confidence 7778888899999999999986 3456665
No 322
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.60 E-value=8.6e-13 Score=156.20 Aligned_cols=313 Identities=15% Similarity=0.119 Sum_probs=179.9
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--eee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++..-.|.+ ... +..+++++|.+ ++++.+. .++++|+++...+..+...+.+.|+++
T Consensus 94 ~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~---l~~~~l~-----~~Gd~Vlv~~P~y~~y~~~~~~~g~~~ 165 (430)
T PLN00145 94 VGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIE---IIMSVLA-----QPGANILLPRPGYPLYEARAVFSGLEV 165 (430)
T ss_pred ccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHH---HHHHHhc-----CCCCEEEEcCCCCccHHHHHHHcCCEE
Confidence 566555555555554443443 233 33444454443 3334331 245789999887766666788899999
Q ss_pred EEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccc--c
Q 001579 705 VSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG--L 776 (1050)
Q Consensus 705 v~V~~d~--~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al~g--l 776 (1050)
+.+++++ ++.+|+++|+++++ ++++++++++|| .+|.+. +.+++|+++|+++|+++++|.++.. .+.+ +
T Consensus 166 ~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~ 242 (430)
T PLN00145 166 RHFDLLPERGWEVDLEGVEALAD---ENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPF 242 (430)
T ss_pred EEeeCCcccCCcCCHHHHHHHhC---cCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCc
Confidence 9998743 36799999999987 789999999995 689876 2489999999999999999998632 1111 1
Q ss_pred CCCCccc---CcEEEeCCccccccCCCCCCCcceeeeec--ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHH
Q 001579 777 TSPGYIG---ADVCHLNLHKTFCIPHGGGGPGMGPIGVK--KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1050)
Q Consensus 777 ~~pg~~G---aDv~~~~~hKtf~~P~g~GGPg~G~i~v~--~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1050)
...+.++ .=+.+.++.|+|++| |+++|++++. +.+..... .+.. . ........+++...|..
T Consensus 243 ~~~~~~~~~~~vi~~~S~SK~~~~p----G~RlG~iv~~~~~~~~~~~~--~~~~-~------~~~~~~~~~~~~~~Q~a 309 (430)
T PLN00145 243 VPMGVFGEVAPVLTLGSISKRWVVP----GWRLGWIATCDPNGILKETK--VVDS-I------RNYLNISTDPATFVQGA 309 (430)
T ss_pred cchhhhcccCcEEEEeccccccCCC----CeeEEEEEEecchhhhhhhH--HHHH-H------HHHhcccCCCCHHHHHH
Confidence 1112222 125567788998766 8999999874 22221100 0000 0 00000111111112221
Q ss_pred HHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCee-ecCCCCccceeEEEecccccccCCC-CHHHHHHHHH-
Q 001579 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPIL-FRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRLM- 928 (1050)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~-~~g~~g~~~~e~i~~~~~~~~~~g~-~~~~vakrL~- 928 (1050)
+..++..-.++-+++..+....+++++.+.|+++..+. ...+.+..+ +.++++. ..-.+. +..+++.+|.
T Consensus 310 ----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y--~~v~l~~-~~~~~~~~~~~~~~~ll~ 382 (430)
T PLN00145 310 ----IPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMF--VMVKLDL-SCLSGIKDDMDFCCKLAK 382 (430)
T ss_pred ----HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeE--EEeccCh-hhcCCCCCHHHHHHHHHH
Confidence 11222211123355566666677888999998752221 111233232 3444431 000012 4556776655
Q ss_pred HCCccc-CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 929 DYGFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 929 d~Gi~~-~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
++|+.+ +...|...+++||+++. +.++++..++.|++.+.+.+
T Consensus 383 ~~gV~v~pG~~fg~~~~lRis~~~--~~~~l~~al~rl~~~~~~~~ 426 (430)
T PLN00145 383 EESVVVLPGSALGMKNWLRITFAI--DPPSLEDGLERLKSFCLRHA 426 (430)
T ss_pred hCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHHhc
Confidence 678875 44445556899999983 56677777777766665543
No 323
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.60 E-value=1.3e-13 Score=160.07 Aligned_cols=210 Identities=21% Similarity=0.193 Sum_probs=146.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.+++++|.+.+ +..++|.++..+++.++. .++++||++...|+..... +...|++++.++.
T Consensus 42 ~~~le~~la~l~g~~~a-~~~~sG~~Ai~~~l~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 112 (369)
T cd00614 42 VDALEKKLAALEGGEAA-LAFSSGMAAISTVLLALL--------KAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDP 112 (369)
T ss_pred HHHHHHHHHHHHCCCCE-EEEcCHHHHHHHHHHHHc--------CCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCC
Confidence 56889999999998765 445778776655544432 2457899988777654432 4568999998876
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+ |+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +.+..|-++|+|+++
T Consensus 113 ~-----d~~~l~~~i~---~~~~~v~~e~~~np~g~~~-dl~~i~~la~~~g~~livD~t~~~--~~~~~~~~~g~Divv 181 (369)
T cd00614 113 D-----DPEALEAAIK---PETKLVYVESPTNPTLKVV-DIEAIAELAHEHGALLVVDNTFAT--PYLQRPLELGADIVV 181 (369)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcc--hhcCChhhhCCcEEE
Confidence 3 6999999996 68999999998 5689887 899999999999999999998542 334567778999999
Q ss_pred eCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.+++|+|+.+ |...+|++++++ ++.+.+.... ...+...+ + ..+|+.+. +-+.
T Consensus 182 ~S~tK~l~g~---~~~~gG~v~~~~~~l~~~l~~~~-------------~~~g~~~~-p-------~~a~~~l~--~l~t 235 (369)
T cd00614 182 HSATKYIGGH---SDVIAGVVVGSGEALIQRLRFLR-------------LALGTILS-P-------FDAWLLLR--GLKT 235 (369)
T ss_pred eccceeccCC---CCceEEEEEeCcHHHHHHHHHHH-------------HhhCCCCC-H-------HHHHHHHc--CCCC
Confidence 9999998521 223478898876 5554432100 00111111 1 12333333 3345
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001579 868 LTEASKIAILNANYMAKRLEKH 889 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~ 889 (1050)
+....++..+|+.++++.|+++
T Consensus 236 l~~r~~~~~~na~~la~~L~~~ 257 (369)
T cd00614 236 LPLRMERHSENALKVAEFLEKH 257 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 6666777889999999999875
No 324
>PRK08068 transaminase; Reviewed
Probab=99.60 E-value=3.4e-13 Score=157.59 Aligned_cols=294 Identities=12% Similarity=0.063 Sum_probs=179.1
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ee-eeccCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~-~l~~~sGa-~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
+|..++.+.+.+++.+..|.+ .. .+..++|+ ++.+ .+++.+. .++++|++++..++.+...+++.|++
T Consensus 70 ~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~---~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~ 141 (389)
T PRK08068 70 RGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLV---ELPQCLM-----NPGDTILVPDPGYPDYLSGVALARAQ 141 (389)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 576666666666666555743 33 34444444 4332 2233321 24578999998887777778899999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccccC
Q 001579 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLT 777 (1050)
Q Consensus 704 vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al~gl~ 777 (1050)
++.++++++ ..+|++++++++. +++++|++++|+ .+|.+- +.+++|.++|+++|+++++|.++.. ...+-.
T Consensus 142 ~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~ 218 (389)
T PRK08068 142 FETMPLIAENNFLPDYTKIPEEVA---EKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK 218 (389)
T ss_pred EEEeecccccCCCCCHHHHHHhcc---ccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCC
Confidence 999999754 4689999999986 678999999994 789875 3578999999999999999998631 111100
Q ss_pred C-C-----CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHH
Q 001579 778 S-P-----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1050)
Q Consensus 778 ~-p-----g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1050)
. + +...-.+++.++.|+|++| |-++|+++.++++...+... .....++..+..+
T Consensus 219 ~~s~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~~~~~~l~~~l~~~--------------~~~~~~~~~~~~q-- 278 (389)
T PRK08068 219 PVSFLQTPGAKDVGIELYTLSKTFNMA----GWRVAFAVGNESVIEAINLL--------------QDHLFVSLFGAIQ-- 278 (389)
T ss_pred CcChhhCCCccCCEEEEecchhccCCc----cceeEeEecCHHHHHHHHHH--------------HhhccCCCChHHH--
Confidence 0 1 1112236677888988644 77899999887766543200 0000111110001
Q ss_pred HHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHH-
Q 001579 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD- 929 (1050)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d- 929 (1050)
.++..++. -+.+-+++..+...++.+++.+.|++. +.+ + .+.+.++ +.+++++ +.+..+++++|.+
T Consensus 279 --~~~~~~l~-~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~-~-~~~g~~~--~~v~~~~-----~~~~~~~~~~l~~~ 346 (389)
T PRK08068 279 --DAAIEALL-SDQSCVAELVARYESRRNAFISACREIGWEV-D-APKGSFF--AWMPVPK-----GYTSEQFADLLLEK 346 (389)
T ss_pred --HHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcc-c-CCCeeEE--EEEECCC-----CCCHHHHHHHHHHh
Confidence 11112221 133445566666677788899999875 332 1 1122221 3456542 3577899999985
Q ss_pred CCcccC-CCCCCC--CCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 930 YGFHGP-TMSWPV--PGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 930 ~Gi~~~-~~~~pv--~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
+||.+. ...|+. .+.+||++. ..++.+...++.|.
T Consensus 347 ~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~ 384 (389)
T PRK08068 347 AHVAVAPGNGFGEHGEGYVRVGLL--TDEERLREAVERIG 384 (389)
T ss_pred CCEEEecchHhCccCCCeEEEEEc--CCHHHHHHHHHHHH
Confidence 699874 333432 468999996 34444444444443
No 325
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.59 E-value=3.9e-13 Score=157.48 Aligned_cols=342 Identities=17% Similarity=0.166 Sum_probs=214.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCCc-cccccCCCCCC-CCCcHHHHHHHHhCCCcccc------cCCChhHH--hhh
Q 001579 139 MKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYN-THVPPVILRNIMENPAWYTQ------YTPYQAEI--AQG 208 (1050)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~~-~~~~lG~g~~~-~~~p~~i~~~i~~~~~~~t~------ytpyq~ei--sqG 208 (1050)
..|| .+|+++..+...|.+|+.++.. +..-.|.|-=. .+.-+.+.|.- .+|+-. ..--||.. |..
T Consensus 28 ~~~p--~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~~~~~~~---~~~~hgigr~~~l~~~q~ka~gss~ 102 (444)
T TIGR03531 28 RKIP--EEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSKLVARRH---YRFCHGIGRSGDLVAPQPKAAGSSL 102 (444)
T ss_pred CcCC--ccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeechhhhhcc---cceecCCCCcccccccCccccCccH
Confidence 3677 6899999999999999987653 44445666321 22222222211 122221 12346663 333
Q ss_pred HHHHHHHHHHHHHHhcCCCC-cceeEecchHH-HHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEc
Q 001579 209 RLESLLNFQTMIADLTGLPM-SNASLLDEGTA-AAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS 286 (1050)
Q Consensus 209 ~le~l~e~q~~ia~L~G~~~-anasl~d~~Ta-a~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~ 286 (1050)
......+|+..+++++|.+. ..+.+++++|+ +...++++.+..+.++++||+++..|.++.+++.. .|++++.+
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~----~G~~pv~V 178 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAIST----AGFEPRVI 178 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHH----cCCeEEEe
Confidence 56777889999999999974 34778899995 33333344432111578999999999999998754 47777777
Q ss_pred Cc-----------hhhhc-cCC---CeeEEEEEcCCCC--eeEccHHHHHHHHHhCCcEEEEEecCccccCCC------C
Q 001579 287 DL-----------KDIDY-KSG---DVCGVLVQYPGTE--GEVLDYGDFIKNAHANGVKVVMATDLLALTILK------P 343 (1050)
Q Consensus 287 ~~-----------~~l~~-l~~---~t~~V~v~~pn~~--G~i~di~~I~~~ah~~galliV~a~~~alg~l~------~ 343 (1050)
|. ++|++ +++ ++..+++.+|+++ |..+|+++|+++|+++|++++|++ ..+++... .
T Consensus 179 d~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDa-Ayg~~~~~~~~~~~~ 257 (444)
T TIGR03531 179 ETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNN-AYGLQSNKYMELINK 257 (444)
T ss_pred eeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEEC-cCcCcChhhhhhhhc
Confidence 62 34555 554 5566777778655 478999999999999999999953 23332211 1
Q ss_pred CCccc-ceEEEecC-ccccccCCCCCcceEEEEEe-hhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCc
Q 001579 344 PGELG-ADIVVGSA-QRFGVPMGYGGPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNI 420 (1050)
Q Consensus 344 pg~~G-aDivvgs~-k~~g~P~~~GGP~~G~la~~-~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsni 420 (1050)
..+.| +|+++.+. |.|..|.+ +|++.++ +++.+++.. . | +. +. ++
T Consensus 258 g~~~Grad~vv~s~hK~l~~pg~-----Gg~I~~~d~el~~~i~~-------~------y---------~g-~~---~~- 305 (444)
T TIGR03531 258 AIKVGRVDAVVSSTDKNFMVPVG-----GAIIYSFDENFIQEISK-------S------Y---------PG-RA---SA- 305 (444)
T ss_pred cccccCCCeEEEeCccCCCCCCC-----EEEEEECCHHHHHHHHH-------h------c---------cC-CC---CC-
Confidence 22354 79999998 88876632 4566664 455554410 0 0 00 11 01
Q ss_pred cchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcC----CCEEEcCCC---CccEEEEec--CC-HHHHHH
Q 001579 421 CTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL----GTVEVQGLP---FFDTVKVKC--AD-AHAIAS 490 (1050)
Q Consensus 421 ct~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~----G~~~l~~~~---~~~~v~i~~--~~-~~~i~~ 490 (1050)
... ..+.+.+..+|.+|++++.++..++++++.+.|+++ | -++++.+ ..--++++. +. ...+..
T Consensus 306 ---s~~--~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~-~~~~~~~~n~is~~~~~~~~~~~~~~~~g~ 379 (444)
T TIGR03531 306 ---SPS--LDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHG-ERLLDTPENPISSAMTLSTLKGKDPTMLGS 379 (444)
T ss_pred ---hHH--HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-cEeecCCCCceeEEEecccccccCHHHHHH
Confidence 111 222333468899999999999999999999999875 5 5666422 211233321 12 778888
Q ss_pred HHHHcCcee-eeec-----------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 491 AAYKIEMNL-RVVD-----------------------SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 491 ~L~~~GI~~-~~~~-----------------------~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
.|..+++-- |.+. -..+.+......|++|||.|++.|.
T Consensus 380 ~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~ 441 (444)
T TIGR03531 380 MLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLE 441 (444)
T ss_pred HHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHh
Confidence 998887731 1110 0134455555678999999998885
No 326
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.59 E-value=9.9e-14 Score=161.98 Aligned_cols=219 Identities=21% Similarity=0.232 Sum_probs=149.1
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.+++++|.+.+ +..++|+.+...++.++. .++++|+++...|+..... +...|++++.++.
T Consensus 61 ~~~le~~lA~l~g~~~a-v~~~sG~~Ai~~~l~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 61 VSNLEGRIAFLEGTEAA-VATSSGMGAIAATLLTIL--------KAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh--------CCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 45789999999999874 566778766544333321 2457899988777643322 4558999999887
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+ |+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +.+..|-..|+|+++
T Consensus 132 ~-----d~e~l~~~i~---~~tklV~le~p~Np~G~v~-dl~~I~~la~~~gi~livD~a~a~--~~~~~~~~~g~Divv 200 (391)
T TIGR01328 132 A-----IPEEVKAHIK---DNTKIVYFETPANPTMKLI-DMERVCRDAHSQGVKVIVDNTFAT--PMLTNPVALGVDVVV 200 (391)
T ss_pred C-----CHHHHHHhhc---cCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCch--hccCCchhcCCCEEE
Confidence 4 8999999997 78999999999 4689887 799999999999999999998643 223456678999999
Q ss_pred eCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhH
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1050)
.+++|+|+.+ |++.+|+++.++++...+.. ... ....+...+ + . .+|..+ .+-+-+
T Consensus 201 ~S~sK~lgg~---g~~~gG~v~~~~~li~~l~~--~~~---------~~~~g~~l~-~----~---~a~l~l--~~L~tl 256 (391)
T TIGR01328 201 HSATKYIGGH---GDVVAGLICGKAELLQQIRM--VGI---------KDMTGSVIS-P----F---DAWLIL--RGLKTL 256 (391)
T ss_pred ccccccccCC---CCceEEEEEcCHHHHHHHHH--HHH---------HhCCCCCCC-c----H---HHHHHH--hCcCcH
Confidence 9999998532 23346888877765544321 000 000111111 1 1 123322 333445
Q ss_pred HHHHHHHHHHHHHHHHHHhccC---CeeecC
Q 001579 869 TEASKIAILNANYMAKRLEKHY---PILFRG 896 (1050)
Q Consensus 869 ~~~a~~~~~~a~yl~~~L~~~~---~v~~~g 896 (1050)
....++..+++.++++.|+++. .|.|+|
T Consensus 257 ~~r~~~~~~na~~la~~L~~~p~v~~v~yp~ 287 (391)
T TIGR01328 257 NIRMKRHSENAMKVAEYLKSHPAVEKVYYPG 287 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 5566777789999999998752 345655
No 327
>PRK06149 hypothetical protein; Provisional
Probab=99.59 E-value=2.4e-13 Score=175.14 Aligned_cols=329 Identities=20% Similarity=0.266 Sum_probs=204.7
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhh--CCCeeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~--G~d~~~l~~~sGa~ge~a~Llair 669 (1050)
..+|+|..++..++..+.. ...+. ..|. .+...++.+.|++++ +++.+ ++.+||++++++++..+|
T Consensus 595 ~~lGh~hp~v~~Ai~~q~~-~l~~~--~~~~--------~~~~~elae~L~~~~p~~~~~v-~f~~SGsEA~e~AlklAr 662 (972)
T PRK06149 595 TVLGHGHPRLAAAAARQWS-LLNTN--SRFH--------YAAVAEFSERLAALAPDGLDTV-FLVNSGSEANDLAIRLAW 662 (972)
T ss_pred cccCCCCHHHHHHHHHHHH-hcccc--cccc--------CHHHHHHHHHHHHhCCCCcCEE-EEeCCchHHHHHHHHHHH
Confidence 3588888887777655532 11111 1121 134568899999998 45544 668999999998888888
Q ss_pred HHHHhcCCCCCCEEEEcCCCCCccHHHHHhCC-------C------EEEEEcCCCC-----CCCC-----HHHHHHHHH-
Q 001579 670 AYHKARGDHHRNVCIIPVSAHGTNPATAAMCG-------M------KIVSVGTDAK-----GNIN-----IEELRKAAE- 725 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G-------~------~vv~V~~d~~-----g~iD-----~e~L~~~i~- 725 (1050)
+| .| ++++|.+..++||..-.+....+ . -+..++.... +..| .+++++.++
T Consensus 663 ~~---tg--r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~ 737 (972)
T PRK06149 663 AA---SG--RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEE 737 (972)
T ss_pred Hh---cC--CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHH
Confidence 76 22 34445567799997644321111 0 1233332111 1112 355555543
Q ss_pred --cCCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc-------c--CcEEEeC
Q 001579 726 --ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-------G--ADVCHLN 790 (1050)
Q Consensus 726 --~~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~-------G--aDv~~~~ 790 (1050)
++++++++|+++.- +..|++.+ .+++|.++|++||+++|+|.+ +.|+.+.|++ | +|++++
T Consensus 738 ~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV----~tGfGRtG~~~~a~e~~gv~PDivt~- 812 (972)
T PRK06149 738 LDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEV----QVGYGRLGHYFWGFEQQGVVPDIITM- 812 (972)
T ss_pred HhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEee----hhcCCccCccchhhhhcCCCCCEEEe-
Confidence 24567888888653 45676651 399999999999999999986 5667677652 3 688876
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ +| -.+|.+++++++...+... + ...+++.|++..++++.+.|..+.++++.+
T Consensus 813 -gK~lg----~G-~Pl~av~~~~~i~~~~~~~--~---------------~~~sT~~gnP~~~aaala~L~~i~~e~l~~ 869 (972)
T PRK06149 813 -AKGMG----NG-HPLGAVITRREIAEALEAE--G---------------YFFSSTGGSPVSCRIGMAVLDVLREEKLQE 869 (972)
T ss_pred -ccccc----CC-eeeEEEEEcHHHHhhhccC--C---------------cccCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 47663 44 3468888888877655311 0 001113467778888899999887776654
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccc-eeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 001579 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVA-HEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~-~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~ 944 (1050)
. +....+||+++|+++ ++++ ..|. |... -+++-+... +.........+.++|.++|+.+.... +..+.
T Consensus 870 ~---~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Gl~~gvel~~~~~~-~~~~~~~~~~i~~~l~~~Gvl~~~~g-~~~~v 943 (972)
T PRK06149 870 N---ARRVGDHLKARLEALADRHPLIGAVHGM-GLYLGVELVRDRQT-LEPATEETAAICDRLLELGVIMQPTG-DHLNI 943 (972)
T ss_pred H---HHHHHHHHHHHHHHHHHhCCCeEEEeec-ceEEEEEEecCccc-CCCChHHHHHHHHHHHhCCeEEeecC-CCCCE
Confidence 3 446778999999875 4432 2232 3221 122111110 00000124578899999999875432 12478
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 945 LMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 945 lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
|+|.|+..+|++|||.++++|.+++.+
T Consensus 944 l~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 944 LKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999998764
No 328
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.59 E-value=1.5e-13 Score=160.88 Aligned_cols=212 Identities=19% Similarity=0.184 Sum_probs=155.8
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch---h
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---D 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~---~ 290 (1050)
.++++.+|++.|.+ ++.++.+|++++.++++++ .. +||+|++++..|+.+...+...++..|++++.+|.. +
T Consensus 73 ~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 147 (403)
T PRK07810 73 SMFEERLRLIEGAE--ACFATASGMSAVFTALGAL-LG--AGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQ 147 (403)
T ss_pred HHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHH-hC--CCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 45778999999977 4788999999888877665 23 899999999999888777766667789999999764 4
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+||++.|+ |.|++ .|.
T Consensus 148 l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD-~a~a~~~~~~~~~~gaDivv~S~tK~l~g---~g~ 223 (403)
T PRK07810 148 WEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLD-NVFATPLLQRGLPLGADVVVYSGTKHIDG---QGR 223 (403)
T ss_pred HHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhcCCcEEEccCCceecC---CcC
Confidence 555 7788999999998 68999999999999999999999994 45666666667789999999998 77753 232
Q ss_pred cceEEEEEehhhhhc-CCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 368 PHAAFLATSQEYKRM-MPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 368 P~~G~la~~~~~~r~-lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
.-+|+++++++.+.. + | ..++..|. | .++ ..|+ +...+-+-+..+
T Consensus 224 ~~gG~v~~~~~~~~~~l-----------------------~--~~~~~~g~---~-~s~---~~a~--l~l~~L~tl~~R 269 (403)
T PRK07810 224 VLGGAILGDREYIDGPV-----------------------Q--KLMRHTGP---A-LSA---FNAW--VLLKGLETLALR 269 (403)
T ss_pred ceeEEEEeChHHHHHHH-----------------------H--HHHHHhCC---C-CCH---HHHH--HHHhccCcHHHH
Confidence 335788887664421 1 0 00111111 1 011 1222 245566667778
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.++..+++.++++.|++...++
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v~ 291 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAVR 291 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCcc
Confidence 8888899999999999875454
No 329
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.59 E-value=4.9e-13 Score=156.43 Aligned_cols=289 Identities=24% Similarity=0.331 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEE-cCCCCCccHHHHHhCCCEEEE---E
Q 001579 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCII-PVSAHGTNPATAAMCGMKIVS---V 707 (1050)
Q Consensus 632 ~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vli-p~saHgt~pa~a~~~G~~vv~---V 707 (1050)
+...++.++++++.|.+.+ +..++|+++.++++.+++.+....+. .+++|++ ..++||.......+.+..... .
T Consensus 81 ~~~~~la~~l~~~~~~~~v-~~~~gg~eA~~~al~~a~~~~~~~~~-~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 158 (396)
T PRK02627 81 EPQEELAEKLVELSGMDKV-FFCNSGAEANEAAIKLARKYGHKKGI-EKPEIITAENSFHGRTLATLSATGQPKYQEGFE 158 (396)
T ss_pred HHHHHHHHHHHhhcCCCEE-EECCCcHHHHHHHHHHHHHHhcccCC-CCCeEEEECCCcCcccHHHHHhcCCccccccCC
Confidence 4456888999999888765 56688999888887777765432221 1245554 567888776655444332211 1
Q ss_pred cCCCCC----CCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCC
Q 001579 708 GTDAKG----NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1050)
Q Consensus 708 ~~d~~g----~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p 779 (1050)
+...+- ..|+++|++++. +++++|+++.++ ..|+.. +.+++|.++|+++|+++++|.++. ++.+.
T Consensus 159 ~~~~~~~~~~~~d~~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~----g~g~~ 231 (396)
T PRK02627 159 PLVEGFIYVPFNDIEALKAAIT---DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQT----GMGRT 231 (396)
T ss_pred CCCCCceEeCCCCHHHHHHhcC---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhc----CCCcc
Confidence 111110 128999999995 789999998763 456432 258999999999999999998753 33222
Q ss_pred C------ccc--CcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHH
Q 001579 780 G------YIG--ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1050)
Q Consensus 780 g------~~G--aDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1050)
| ..| .|++++ .|.++ +|..+|++++++++...+... . .....+ ++..
T Consensus 232 g~~~~~~~~~~~pdi~t~--sK~~~-----~G~rig~~~~~~~~~~~~~~~------------~--~~~t~~----~~~~ 286 (396)
T PRK02627 232 GKLFAYQHYGIEPDIMTL--AKGLG-----GGVPIGAVLAKEKVADVFTPG------------D--HGSTFG----GNPL 286 (396)
T ss_pred CceeeehhcCCCCCEEEE--cchhh-----CCcccEEEEEcHHHHhccCCC------------C--CCCCCC----CCHH
Confidence 2 223 576654 58774 457799999988776654210 0 001112 2333
Q ss_pred HHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHH
Q 001579 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1050)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakr 926 (1050)
.+.++.+.+..+..+++. ++..++.+++.++|.+. ++.. ..+ .|.. +.+.+. .+..+++++
T Consensus 287 ~~~aa~~~l~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~---~~i~~~-------~~~~~~~~~ 352 (396)
T PRK02627 287 ACAAALAVIEIIEEEGLL---ENAAEVGEYLRAKLRELLEKYPGIKEVRG-LGLM---IGIELD-------RPAAEIVKK 352 (396)
T ss_pred HHHHHHHHHHHHhhccHH---HHHHHHHHHHHHHHHHHHHhCCCeeeecc-CcEE---EEEEec-------CcHHHHHHH
Confidence 444555666655444433 34445667777777654 2221 111 1211 233332 246789999
Q ss_pred HHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 927 LMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 927 L~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
|.++|+.+.... .+.+||+|+...+++++|++++.|.+++++
T Consensus 353 l~~~Gv~v~~~~---~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 353 ALEKGLLINVTG---DNVLRLLPPLIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred HHHCCeEEeecC---CCEEEEECCcccCHHHHHHHHHHHHHHHHh
Confidence 999999875332 367999999889999999999999988764
No 330
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.59 E-value=8.6e-14 Score=161.39 Aligned_cols=217 Identities=14% Similarity=0.109 Sum_probs=153.3
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
...+++.+++|-|.+.+.+ ..||..|..++++++. .++|+||++...||..... ++..|+++..++.
T Consensus 64 ~~~le~~la~LEg~~~a~~-~~SGmaAi~~~~~~ll--------~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 64 HFSLQEAMCELEGGAGCAL-YPCGAAAVANAILAFV--------EQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred HHHHHHHHHHHhCCCeEEE-EhHHHHHHHHHHHHHc--------CCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 4468899999999876544 4568776655554431 2467899988777654443 3557999999875
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcC--CEEEEeccccccccccCCCCcccCcE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNG--GQVYMDGANMNAQVGLTSPGYIGADV 786 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G--~~v~vD~A~~~al~gl~~pg~~GaDv 786 (1050)
.|.++++++++ ++|++|+++.| |.+|.+. ||++|+++||++| ++++||+++.. +.+.+|.++|+|+
T Consensus 135 -----~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~-DI~~Ia~ia~~~g~g~~lvVDnT~a~--p~~~~pl~~GaDi 203 (395)
T PRK08114 135 -----LIGADIAKLIQ---PNTKVVFLESPGSITMEVH-DVPAIVAAVRSVNPDAVIMIDNTWAA--GVLFKALDFGIDI 203 (395)
T ss_pred -----CCHHHHHHhcC---CCceEEEEECCCCCCCEee-cHHHHHHHHHHhCCCCEEEEECCCcc--ccccCHHHcCCcE
Confidence 47899999997 78999999999 5788887 8999999999985 99999988654 3347899999999
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
++.++||+++.| +.-++|+++.++++...+-. . .+..+...+ |+ -+|+...|-+
T Consensus 204 vv~S~tKyl~Gh---sdv~~G~v~~~~~~~~~l~~----~---------~~~~G~~~~-p~---------~a~l~~rgl~ 257 (395)
T PRK08114 204 SIQAGTKYLVGH---SDAMIGTAVANARCWEQLRE----N---------SYLMGQMVD-AD---------TAYMTSRGLR 257 (395)
T ss_pred EEEcCcccccCC---CcceeEEEEcCHHHHHHHHH----H---------HHhccCCCC-HH---------HHHHHHcCCC
Confidence 999999999522 11267877766543322110 0 011122221 11 2345556666
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccC---CeeecC
Q 001579 867 GLTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~~---~v~~~g 896 (1050)
-|.-+.++..+||..+++.|+++. +|.|+|
T Consensus 258 TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPg 290 (395)
T PRK08114 258 TLGVRLRQHEESSLKVAEWLAEHPEVARVNHPA 290 (395)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCC
Confidence 677777888899999999999873 456665
No 331
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.59 E-value=2e-13 Score=157.96 Aligned_cols=213 Identities=21% Similarity=0.202 Sum_probs=151.6
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch---
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 289 (1050)
...+++.+++|.|.+. +.++.+|.+|+.++++++. + +||+|++++..+..+...++.....+|+++.++|..
T Consensus 57 ~~~le~~la~Le~g~~--a~~~~SGmaAi~~~l~~ll-~--~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~ 131 (386)
T PF01053_consen 57 VRALEQRLAALEGGED--ALLFSSGMAAISAALLALL-K--PGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLE 131 (386)
T ss_dssp HHHHHHHHHHHHT-SE--EEEESSHHHHHHHHHHHHS----TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHH
T ss_pred HHHHHHHHHHhhcccc--eeeccchHHHHHHHHHhhc-c--cCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHH
Confidence 3446689999999865 7889999999988887762 3 799999999999999999988778899999999874
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCC-cEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANG-VKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~g-alliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~ 365 (1050)
++++ ++++|++|++..| |.+..+.||++|+++||++| ++++| ++.++.+++..|-++||||++.|+ |.+++ -
T Consensus 132 ~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vV-DnT~atp~~~~pL~~GaDivv~S~TKyl~G---h 207 (386)
T PF01053_consen 132 ALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVV-DNTFATPYNQNPLELGADIVVHSATKYLSG---H 207 (386)
T ss_dssp HHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEE-ECTTTHTTTC-GGGGT-SEEEEETTTTTTT---S
T ss_pred HHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEe-eccccceeeeccCcCCceEEEeeccccccC---C
Confidence 5555 7889999999998 88999999999999999999 99999 467777777889999999999998 77653 2
Q ss_pred CCcceEEEEEeh--hhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccH
Q 001579 366 GGPHAAFLATSQ--EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 443 (1050)
Q Consensus 366 GGP~~G~la~~~--~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl 443 (1050)
|.--+|.+.++. ++.+++ ...++.-| +.. ++. ..|+...|-+-+
T Consensus 208 sdv~~G~vv~~~~~~~~~~l-------------------------~~~~~~~G--~~~--~p~-----da~ll~rgl~Tl 253 (386)
T PF01053_consen 208 SDVMGGAVVVNGSSELYDRL-------------------------REFRRLLG--ATL--SPF-----DAWLLLRGLRTL 253 (386)
T ss_dssp SSE-EEEEEESSHHHHHHHH-------------------------HHHHHHHT---B----HH-----HHHHHHHHHTTH
T ss_pred cceeeEEEEECchhhhhhhh-------------------------cchhhhcC--ccc--hHH-----HHHHHhcCCCcH
Confidence 222357777664 333322 00111111 110 111 113344455556
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEE
Q 001579 444 KTIAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 444 ~~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
..+.++..++|..+++.|++...++
T Consensus 254 ~~R~~~~~~nA~~lA~~L~~hp~V~ 278 (386)
T PF01053_consen 254 PLRMERQNENAEALAEFLEEHPKVK 278 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 6677788899999999999985465
No 332
>PLN02242 methionine gamma-lyase
Probab=99.59 E-value=2.1e-13 Score=160.32 Aligned_cols=217 Identities=18% Similarity=0.160 Sum_probs=153.4
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHh-ccCCCeEEEEcCc---
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITR-ADGFDIKVVVSDL--- 288 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~-a~~~gi~v~~~~~--- 288 (1050)
..++++.+|+++|.+. +.++.+|++++.++++++ .. +||+||++...++.+...+... .+..|+++++++.
T Consensus 78 ~~~LE~~lA~l~g~~~--~l~~~sG~~Ai~~al~al-~~--~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~ 152 (418)
T PLN02242 78 VLNLGRQMAALEGTEA--AYCTASGMSAISSVLLQL-CS--SGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDL 152 (418)
T ss_pred HHHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHH-hC--CCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCH
Confidence 4557789999999987 567899998888777665 22 8999999999998887766432 3347899888765
Q ss_pred hhhhc-cCC-CeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCC
Q 001579 289 KDIDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMG 364 (1050)
Q Consensus 289 ~~l~~-l~~-~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~ 364 (1050)
+++++ +++ ++++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++. +...+.++|+||+++|. |.|+++
T Consensus 153 e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livD-ea~~~-~~~~~~~~g~divv~S~SK~l~g~-- 228 (418)
T PLN02242 153 EAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVD-NTFAP-MVLSPARLGADVVVHSISKFISGG-- 228 (418)
T ss_pred HHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEE-CCCCc-cCCCHHHcCCcEEEEeCccccCCC--
Confidence 45555 777 4999999998 78999999999999999999999994 44442 23356678999999998 877642
Q ss_pred CCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHH
Q 001579 365 YGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1050)
Q Consensus 365 ~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~ 444 (1050)
|..-+|+++++++++..+... + +. + ....|. .+....|+ +...+.+-+.
T Consensus 229 -g~~~gG~iv~~~~li~~l~~~--------------------~-~~-~----~~~~g~--~~~~~~A~--l~~~~l~tl~ 277 (418)
T PLN02242 229 -ADIIAGAVCGPAELVNSMMDL--------------------H-HG-A----LMLLGP--TMNPKVAF--ELSERLPHLS 277 (418)
T ss_pred -CCceEEEEEcCHHHHHHHHHH--------------------h-hh-h----hhccCC--CCCHHHHH--HHHcCCCcHH
Confidence 333368888887766554100 0 00 0 001111 11111222 2334555566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEc
Q 001579 445 TIAQRVHGLAGTFALGLKKLGTVEVQ 470 (1050)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~G~~~l~ 470 (1050)
...++..+++.++++.|++.| +++.
T Consensus 278 ~r~~~~~~~a~~la~~L~~~~-~~V~ 302 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKELG-LKVI 302 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhCC-CEEE
Confidence 677788999999999999997 7775
No 333
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.59 E-value=4.4e-13 Score=156.34 Aligned_cols=294 Identities=15% Similarity=0.156 Sum_probs=179.3
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--ee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++...+.+++.+..|.+ .. .+..++|++. +..++++.+. .++++|++++..+..+...++..|.++
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~--~i~~~~~~~~-----~~gd~Vl~~~P~y~~~~~~~~~~g~~~ 141 (385)
T PRK09276 69 EGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE--GIAHIPLAFV-----NPGDVVLVPDPGYPVYKIGTIFAGGEP 141 (385)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH--HHHHHHHHhC-----CCCCEEEEcCCCCcChHHHHHHcCCEE
Confidence 566666666777776665653 22 3555555542 2223334331 245789999987776667788999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cccCC
Q 001579 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTS 778 (1050)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~gl~~ 778 (1050)
+.++.+.+ ..+|++++++++. +++++|++++| |.+|.+. +.+++|+++|+++|+++++|.++..-. .+...
T Consensus 142 ~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 218 (385)
T PRK09276 142 YFMPLKEENGFLPDLDAIPEDVA---KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKP 218 (385)
T ss_pred EEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCC
Confidence 99998643 4589999998886 68899999999 5788875 247999999999999999999864211 11111
Q ss_pred C------CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 779 P------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 779 p------g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
+ ...+-.+.+.++.|.|+.| |.++|++++++++...+... +......+. ...
T Consensus 219 ~~~~~~~~~~~~~i~~~S~SK~~g~~----GlRiG~~i~~~~l~~~~~~~------------~~~~~~~~~------~~~ 276 (385)
T PRK09276 219 PSFLEVPGAKDVGIEFHSLSKTYNMT----GWRIGFAVGNADLIAGLGKV------------KSNVDSGVF------QAI 276 (385)
T ss_pred CChhccCCCcCCEEEEecchhhcCCc----chhheeeeCCHHHHHHHHHH------------HhhccCCCC------HHH
Confidence 1 1112346778888988644 67799999887765543210 000001111 111
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HC
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DY 930 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~ 930 (1050)
..++..++. ...+-+++..+....+.+++.+.|++. +++. .+.+.++ ++++++ .+.+..+++++|. ++
T Consensus 277 q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~~~--~~v~~~-----~~~~~~~l~~~ll~~~ 346 (385)
T PRK09276 277 QEAGIAALN-GPQEVVEELRKIYQERRDILVEGLRKLGLEVE--PPKATFY--VWAPVP-----KGYTSAEFATLLLDKA 346 (385)
T ss_pred HHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--CCCcceE--EEEECC-----CCCCHHHHHHHHHHhC
Confidence 111222222 123334555566667788899999875 3321 2222221 345554 2457789999886 58
Q ss_pred CcccCCC-CCC--CCCEEEEEcCCCCCHHHHHHHHHHH
Q 001579 931 GFHGPTM-SWP--VPGTLMIEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 931 Gi~~~~~-~~p--v~~~lrI~~te~~t~eeid~fv~aL 965 (1050)
|+.+... .|. ..+.+||++. .+++++...++.|
T Consensus 347 gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l 382 (385)
T PRK09276 347 GVVVTPGNGFGEYGEGYFRIALT--VPDERIEEAVERI 382 (385)
T ss_pred CEEECCchhhCCCCCCeEEEEeC--CCHHHHHHHHHHH
Confidence 9986432 232 2478999986 3455555555444
No 334
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.59 E-value=1.6e-13 Score=161.68 Aligned_cols=231 Identities=21% Similarity=0.209 Sum_probs=153.2
Q ss_pred HHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcC-c---hh
Q 001579 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-L---KD 290 (1050)
Q Consensus 215 e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~-~---~~ 290 (1050)
.+++.+|++.|.+. +.++.+|++|+.++++++ .. +||+||++...|..+...+...+...|++++.++ . ++
T Consensus 73 ~Le~~lA~l~g~~~--av~~sSG~aAi~~al~al-l~--~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~ 147 (436)
T PRK07812 73 VVEQRIAALEGGVA--ALLLASGQAAETFAILNL-AG--AGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDA 147 (436)
T ss_pred HHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHH-hC--CCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHH
Confidence 56789999999876 788899999888887765 23 7999999999999888777665667899999885 3 34
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+.+..|.++|+|+++.|+ |.+++ .|+
T Consensus 148 l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD-~t~a~~~~~~pl~~GaDivv~S~tK~lgg---~G~ 223 (436)
T PRK07812 148 WRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVD-NTIATPYLIRPLEHGADIVVHSATKYLGG---HGT 223 (436)
T ss_pred HHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhcCCCEEEEecccccCC---CCC
Confidence 555 7789999999987 78999999999999999999999994 35566666677889999999998 66653 233
Q ss_pred cceEEEEEehhhhhcCCCcEEeEeecCCCCcceEE----ec-------ccccccccccccCCCccchhHHHHHHHHHHHH
Q 001579 368 PHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRV----AM-------QTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1050)
Q Consensus 368 P~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l----~l-------qtreq~irRekaTsnict~~~l~a~~aa~y~~ 436 (1050)
--+|.+..+..+...-+ ....+..+ .+.|.- .+ +-|. ..++.-| +...+ -..|+.
T Consensus 224 ~i~G~vv~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~G----~~l~p-----~~a~l~ 289 (436)
T PRK07812 224 AIAGVIVDGGTFDWTQG-RFPGFTTP---DPSYHGVVFAELGPPAYALKARV-QLLRDLG----SAISP-----FNAFLI 289 (436)
T ss_pred eEEEEEEcCCccccccc-cccccccC---CcccccchhhhcchhHHHHHHHH-HHHHhcC----CCCCH-----HHHHHH
Confidence 22343333332211111 11111111 010100 00 0000 0111111 00011 112445
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 001579 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
..|-+-|..+.++..++|..|++.|++.++++
T Consensus 290 ~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~ 321 (436)
T PRK07812 290 AQGLETLSLRIERHVANAQRVAEFLEARDEVA 321 (436)
T ss_pred hcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 66666777788888999999999999986454
No 335
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.59 E-value=3.1e-13 Score=156.83 Aligned_cols=290 Identities=16% Similarity=0.170 Sum_probs=177.9
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~ 714 (1050)
.++++.+++.+|++..++..++|++.... ++++.+. .+++.|+++...|..+...+.+.|.+++.++++.++
T Consensus 70 ~~Lr~~ia~~~~~~~~~I~it~G~~~~l~--~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~- 141 (369)
T PRK08153 70 HDLRHALAAHHGVAPENIMVGEGIDGLLG--LIVRLYV-----EPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDR- 141 (369)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHH--HHHHHhc-----CCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCCC-
Confidence 47888888989987656666777653322 2223221 246789998876655555577899999999987664
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHH--cCCEEEEeccccc-cccccCCC-CcccCc-EEE
Q 001579 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMN-AQVGLTSP-GYIGAD-VCH 788 (1050)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~--~G~~v~vD~A~~~-al~gl~~p-g~~GaD-v~~ 788 (1050)
+|++++.+++. .+++++|++++|+ .+|.+- +.+++.++++. +|+++++|.++.. ...+-..+ .....+ ++.
T Consensus 142 ~~~~~l~~~~~--~~~~~~i~l~~P~NPtG~~~-~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~ 218 (369)
T PRK08153 142 EDLDALLDAAR--RENAPLVYLANPDNPMGSWH-PAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRM 218 (369)
T ss_pred CCHHHHHHHhc--ccCCcEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEE
Confidence 89999987775 2578889999994 689886 45555554443 3899999998531 10110001 011112 556
Q ss_pred eCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhH
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1050)
.++.|+|++ .|.++|++++++++++.+... ....+++ . ....++.+++. ..+-+
T Consensus 219 ~SfSK~~g~----~GlRiG~~v~~~~~~~~l~~~--------------~~~~~~s--~----~~q~~~~~~l~--~~~~~ 272 (369)
T PRK08153 219 RTFSKAYGL----AGARVGYAIGAPGTIKAFDKV--------------RNHFGMN--R----IAQAAALAALK--DQAYL 272 (369)
T ss_pred ecchHhccC----cchheeeeecCHHHHHHHHHh--------------hcCCCCC--H----HHHHHHHHHhc--CHHHH
Confidence 677888754 478899999887665443200 0011111 1 11222233332 22334
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccC-CCCCCCCCEEE
Q 001579 869 TEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP-TMSWPVPGTLM 946 (1050)
Q Consensus 869 ~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~-~~~~pv~~~lr 946 (1050)
++..+....+.+++.+.|++. +.+ ++ .+..+ +.+++.. ......++.+.|.++||.+. ....+..+.+|
T Consensus 273 ~~~~~~~~~~r~~~~~~L~~~g~~~-~p--~~~~f--~~~~~~~----~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iR 343 (369)
T PRK08153 273 AEVVGKIAAARDRIAAIARANGLTP-LP--SATNF--VAIDCGR----DGAFARAVLDGLIARDIFVRMPGVAPLDRCIR 343 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCcc-CC--CcCcE--EEEECCC----CcccHHHHHHHHHHCCeEEeeCCCCCCCCeEE
Confidence 555556667778888888764 322 11 12121 3345431 12356789999999999873 11112346899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 947 IEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 947 I~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
|++. +++|+++|+++|++++..++
T Consensus 344 is~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 344 VSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred EecC---CHHHHHHHHHHHHHHHHHhh
Confidence 9986 68999999999999887554
No 336
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.59 E-value=2.3e-13 Score=160.76 Aligned_cols=320 Identities=15% Similarity=0.207 Sum_probs=188.4
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAY 671 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y 671 (1050)
..+|++...+..++..+... .. .|. + + . +...++.+.|+++++-..-.++.++|+++.+++++++|.|
T Consensus 60 ~~lGh~~p~v~~ai~~q~~~-~~--~~~-~-~---~----~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~ 127 (423)
T TIGR00713 60 LILGHAHPRVVEAVKEALER-GT--SYG-A-P---T----EAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGY 127 (423)
T ss_pred cccCCCCHHHHHHHHHHHHh-CC--cCC-C-C---C----HHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHh
Confidence 35677776666665554221 11 111 1 1 1 1234778888887754333466889999999888888876
Q ss_pred HHhcCCCCCCEEEE-cCCCCCccHHHHHhC--CC-----------------EEEEEcCCCCCCCCHHHHHHHHHcCCCCE
Q 001579 672 HKARGDHHRNVCII-PVSAHGTNPATAAMC--GM-----------------KIVSVGTDAKGNINIEELRKAAEANRDNL 731 (1050)
Q Consensus 672 ~~~~G~~~r~~Vli-p~saHgt~pa~a~~~--G~-----------------~vv~V~~d~~g~iD~e~L~~~i~~~~~~t 731 (1050)
. +|++||. ..++||.......+. |. .+..++. .|+++|+++++++.+++
T Consensus 128 ~------gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~ 196 (423)
T TIGR00713 128 T------GRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPY-----NDLEALEEVFEEYGEEI 196 (423)
T ss_pred h------CCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCC-----CCHHHHHHHHHHcCCcE
Confidence 2 2456664 557898654433211 10 1122221 38999999998665788
Q ss_pred EEEEEE-cCCCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCC------cc--cCcEEEeCCccccccCC
Q 001579 732 STLMVT-YPSTHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------YI--GADVCHLNLHKTFCIPH 799 (1050)
Q Consensus 732 aaV~vt-~Pn~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg------~~--GaDv~~~~~hKtf~~P~ 799 (1050)
++|+++ .|+..|.+.+ .+++|.++|++||+++++|.++ .|+ +.| .+ ..|+++ +.|+++
T Consensus 197 aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~----~g~-r~g~~~~~~~~~~~pDi~t--~sK~l~--- 266 (423)
T TIGR00713 197 AGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVM----TGF-RVALGGAQEYFGVEPDLTT--LGKIIG--- 266 (423)
T ss_pred EEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc----ccc-ccCcchhHHHhCCCcchhh--hhhhhc---
Confidence 999886 5666787753 3899999999999999999875 333 211 12 357654 357763
Q ss_pred CCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHH
Q 001579 800 GGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNA 879 (1050)
Q Consensus 800 g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a 879 (1050)
+|..+|++++++++.+.+... +. .. ... ++.+++..++++.+.+..+..+++.+. ..+..
T Consensus 267 --~G~pig~v~~~~~i~~~~~~~--~~---------~~-~~~---T~~~~~~~~aaa~a~l~~~~~~~~~~~---~~~~~ 326 (423)
T TIGR00713 267 --GGLPVGAFGGRREIMERLAPE--GP---------VY-QAG---TLSGNPLAMAAGLATLKLLDEEGVYTE---LDELA 326 (423)
T ss_pred --CCCceeeeeEHHHHHHhhCcC--CC---------ee-ecc---CCCCCHHHHHHHHHHHHHHhcccHHHH---HHHHH
Confidence 456789999998877665310 00 00 001 122355566667777877765554432 23344
Q ss_pred HHHHHHHhcc---CCee--ecCCCCccceeEEEecccccc---cCCCC---HHHHHHHHHHCCcccCCCCCCCCCEEEEE
Q 001579 880 NYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKN---TAGIE---PEDVAKRLMDYGFHGPTMSWPVPGTLMIE 948 (1050)
Q Consensus 880 ~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~---~~g~~---~~~vakrL~d~Gi~~~~~~~pv~~~lrI~ 948 (1050)
++++++|++. +.+. ..+. |..+ .+.++....+. ....+ ...+.++|.++|+.+....+ +.++++
T Consensus 327 ~~~~~~l~~~~~~~~~~~~v~~~-g~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---~~~~l~ 401 (423)
T TIGR00713 327 KRLAEGLSEVLEDTGIPHTVNRV-GSMF-SLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQF---EACFLS 401 (423)
T ss_pred HHHHHHHHHHHHhcCCCeEEEee-ccEE-EEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCCc---cceeeE
Confidence 5555555432 2221 1221 2221 12232211000 00011 23688899999998764333 457887
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHH
Q 001579 949 PTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 949 ~te~~t~eeid~fv~aL~~i~~e 971 (1050)
+. .|++|||++++.|.+++.+
T Consensus 402 ~~--~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 402 AA--HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred CC--CCHHHHHHHHHHHHHHHhh
Confidence 76 6899999999999988754
No 337
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.58 E-value=3.1e-13 Score=158.08 Aligned_cols=213 Identities=20% Similarity=0.216 Sum_probs=152.9
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---h
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~ 289 (1050)
..++++++|++.|.+. +.++.+|++++.++++++ . ++||+||++...|+++...++..++..|++++.++. +
T Consensus 66 ~~~le~~lA~l~g~~~--~i~~ssG~~Ai~~~l~al-l--~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e 140 (398)
T PRK08249 66 VQAFEEKVRILEGAEA--ATAFSTGMAAISNTLYTF-L--KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHE 140 (398)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCChHHHHHHHHHHh-c--CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHH
Confidence 4567899999999765 678888888777666554 2 279999999999999988887666778999998765 4
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|..+|+|+++.|. |.++++ |
T Consensus 141 ~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~l~~~~Divv~S~sK~l~g~---~ 216 (398)
T PRK08249 141 QIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVD-NTFATPINQNPLALGADLVIHSATKFLSGH---A 216 (398)
T ss_pred HHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE-CCcCccccCCchhhCCCEEeccCceecCCC---C
Confidence 5655 7788999999988 78999999999999999999999994 34454444456678999999998 777532 2
Q ss_pred CcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 367 GP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
.-.+|++..++++.+++. ..|+..+ ++.++. .+ |+...+.+-+...
T Consensus 217 ~~~gG~vv~~~~l~~~l~-------------------------~~~~~~g----~~~s~~---~a--~l~l~~l~tL~~R 262 (398)
T PRK08249 217 DALGGVVCGSKELMEQVY-------------------------HYREING----ATMDPM---SA--YLILRGMKTLKLR 262 (398)
T ss_pred CceEEEEECCHHHHHHHH-------------------------HHHHhcC----CCCCHH---HH--HHHHhCcchHHHH
Confidence 122477777666655441 0011111 011122 11 1244555666667
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.++..+++..+++.|++.+.++
T Consensus 263 ~~~~~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 263 VRQQQESAMALAKYLQTHPKVE 284 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCee
Confidence 7888899999999999875454
No 338
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.58 E-value=5.9e-14 Score=162.01 Aligned_cols=295 Identities=12% Similarity=0.068 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHhhCCCe---eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCC
Q 001579 630 YQEMFNNLGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGM 702 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~---~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~ 702 (1050)
..+++++.++.+++++|.+. +.+.++||+.+.++++..+ . .++ .+.++|++ |.+.. .++..|+
T Consensus 42 ~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l---~-~~~-~~~~~i~~-----g~~~~~~~~~a~~~g~ 111 (355)
T cd00611 42 FEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL---L-GDK-GTADYVVT-----GAWSAKAAKEAKRYGG 111 (355)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc---C-CCC-CeEEEEEC-----CHHHHHHHHHHHhcCC
Confidence 34778899999999999742 4456676877765554433 1 122 13344433 22333 4567899
Q ss_pred EEEEEcCCCCCCC-C-HHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCC
Q 001579 703 KIVSVGTDAKGNI-N-IEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP 779 (1050)
Q Consensus 703 ~vv~V~~d~~g~i-D-~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p 779 (1050)
+++.++++++|.. + ++..+..++ +++++|.+++- |.+|+.. . ++++.+|++++||+++..+...+ ..
T Consensus 112 ~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~lV~~~h~~t~tG~~~---~---~i~~~~g~~~~VDa~qs~g~~~i-dv 181 (355)
T cd00611 112 VVVIVAAKEEGKYTKIPDVETWDLA---PDAAYVHYCSNETIHGVEF---D---EVPDTGGVPLVADMSSNILSRPI-DV 181 (355)
T ss_pred CcEEEecccccCCCCCCCHhhcCCC---CCCCEEEEeCCcccccEEc---c---eecccCCCeEEEEccccccCCCC-CH
Confidence 9999998766533 5 233333343 78888888876 4588863 2 34455999999999875433222 22
Q ss_pred CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCC-CC-CCCCCCCCCCCCCcchhhhHHHHHHHH
Q 001579 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTG-GI-PAPEKSQPLGTIAAAPWGSALILPISY 857 (1050)
Q Consensus 780 g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~-~~-~~~~~~~~t~~i~sa~~g~~~~~~~a~ 857 (1050)
.+++ +++.+.||+|+ .||+|++++++++.+.++........ .. ........|+++. .+....
T Consensus 182 ~~~~--~~~ss~~K~lG------P~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~--------~i~~L~ 245 (355)
T cd00611 182 SKFG--VIYAGAQKNLG------PAGVTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTF--------AIYMMG 245 (355)
T ss_pred HHhC--EEEeecccccC------CCceEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHH--------HHHHHH
Confidence 3344 55566899773 36889999998776555432111000 00 0000011222221 122234
Q ss_pred HHHHHHChh-hHHHHHHHHHHHHHHHHHHHhccCCeeecCCCC---ccceeEEEecccccccCCC-CHHHHHHHHHHCCc
Q 001579 858 TYIAMMGSK-GLTEASKIAILNANYMAKRLEKHYPILFRGVNG---TVAHEFIVDLRGLKNTAGI-EPEDVAKRLMDYGF 932 (1050)
Q Consensus 858 a~l~~lG~e-Gl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g---~~~~e~i~~~~~~~~~~g~-~~~~vakrL~d~Gi 932 (1050)
+.+.++-++ |++++.++...+++++.++|+++-.+ +.+... +....+.|.+. +. ...++.+.+.+.|+
T Consensus 246 aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl-~~~~~~~~~rs~~vvsf~~~------~~~l~~~~~~~~~r~G~ 318 (355)
T cd00611 246 LVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF-YRGPVDKRARSRMNVPFRLG------KEELEKEFLKEAEAAGM 318 (355)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc-cccCCCHHHcCceEEEEEcC------ChhhhHHHHHHHHHCCC
Confidence 556666677 78888889999999999999986232 211111 11111333432 21 12455567778999
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 933 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 933 ~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
+++... ...+++|+++..++|++|||+|+++|+++
T Consensus 319 ~~~~~~-~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 319 IGLKGH-RSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred cccCCC-cccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 865432 12489999999999999999999999985
No 339
>PRK05968 hypothetical protein; Provisional
Probab=99.58 E-value=1.1e-13 Score=161.49 Aligned_cols=283 Identities=14% Similarity=0.122 Sum_probs=178.2
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~p----a~a~~~G~~vv~V~~ 709 (1050)
..++++.+++++|.+.+ +..++|+.|..+++++. . .++++||++...|+.+. ..+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g~~~a-v~~~sG~~Ai~~al~al----~----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 65 VRAFEEMLAKLEGAEDA-RGFASGMAAISSTVLSF----V----EPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHH----h----CCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 56889999999999865 34467776554333322 1 24578888877665433 235568999999875
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+ |++++++++ +++++|++++|+ ..+.+. |+++|+++||++|+++++|+++.. ..+..|-.+|+|+++
T Consensus 136 ~-----d~~~l~~~i----~~tklV~ie~pt~~~~~~~-dl~~i~~la~~~gi~vivD~a~a~--~~~~~p~~~g~Divv 203 (389)
T PRK05968 136 R-----DEEAVAKAL----PGAKLLYLESPTSWVFELQ-DVAALAALAKRHGVVTMIDNSWAS--PVFQRPITLGVDLVI 203 (389)
T ss_pred C-----CHHHHHHhc----ccCCEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCcc--hhccCchhcCCcEEE
Confidence 3 899999887 467889999985 566666 899999999999999999998642 223456678999999
Q ss_pred eCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCC-CCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~-~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.+++|+|+.| |++++|+++.++++...+..... ...+ .++ + ..||. ...+-+.
T Consensus 204 ~S~tK~l~g~---~~~~gG~i~~~~~~~~~l~~~~~------------~~~g~~~~--~-------~~A~~--~l~~L~t 257 (389)
T PRK05968 204 HSASKYLGGH---SDTVAGVVAGSKEHIARINAEAY------------PYLGAKLS--P-------FEAWL--LLRGLRT 257 (389)
T ss_pred eeccccccCC---CCeEEEEEEECHHHHHHHHHHHH------------HhCCCCCC--h-------HHHHH--HHcccCc
Confidence 9999999632 34557888887765543210000 0001 111 1 11232 2334445
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeecCCCC-------ccceeEEEecccccccCCCCHHHHHHHHHHCCcccC--
Q 001579 868 LTEASKIAILNANYMAKRLEKHY---PILFRGVNG-------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP-- 935 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~~---~v~~~g~~g-------~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~-- 935 (1050)
+....++..+++.++++.|+++. .+.|++-.. .....+.|++. .+.+..++.++|...++.++
T Consensus 258 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~-----~~~~~~~f~~~L~~~~~~~s~G 332 (389)
T PRK05968 258 LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR-----EGIDVRAFADALKLFRLGVSWG 332 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC-----CHHHHHHHHHhCCccEEecCCC
Confidence 66677777888999999998762 233443110 00112334442 13456788888876554321
Q ss_pred ---C-C-----C----C--------CC-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 936 ---T-M-----S----W--------PV-PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 936 ---~-~-----~----~--------pv-~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
+ + . . .+ .+.+|+++... +.|.+++.|+++++.+
T Consensus 333 ~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE----~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 333 GHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLE----GTEALWADLEQALAAA 387 (389)
T ss_pred CCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccC----CHHHHHHHHHHHHHHh
Confidence 1 0 0 0 11 46899998754 4566666666666543
No 340
>PLN02509 cystathionine beta-lyase
Probab=99.58 E-value=1.6e-13 Score=162.28 Aligned_cols=212 Identities=18% Similarity=0.187 Sum_probs=149.6
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---h
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~ 289 (1050)
..++++.++++.|.+. +.++.+|++++.++. +. .. +||+||+++..|+.+...++......|++++.++. +
T Consensus 135 ~~aLE~~lA~leg~e~--ai~~~SG~aAi~~il-~l-l~--~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e 208 (464)
T PLN02509 135 RDALESLLAKLDKADR--AFCFTSGMAALSAVT-HL-IK--NGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLD 208 (464)
T ss_pred HHHHHHHHHHHhCCCE--EEEeCcHHHHHHHHH-HH-hC--CCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHH
Confidence 4557789999998764 667788887764433 32 22 89999999999999987776555678999998865 4
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+.+..|.++|+|++++|. |.+++| |
T Consensus 209 ~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD-~A~a~~~~~~pl~~gaDivv~S~tK~l~G~---g 284 (464)
T PLN02509 209 EVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVD-NSIMSPVLSRPLELGADIVMHSATKFIAGH---S 284 (464)
T ss_pred HHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEE-CCccccccCChhhcCCcEEEecCcccccCC---C
Confidence 5555 7788999999998 78999999999999999999999994 45666766677789999999998 877643 3
Q ss_pred CcceEEEEEehhh-hhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001579 367 GPHAAFLATSQEY-KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1050)
Q Consensus 367 GP~~G~la~~~~~-~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1050)
+..+|+++++++. .+.+ ...|+..++ .+....| |+...|-+-|..
T Consensus 285 dv~gG~v~~~~~~l~~~~-------------------------~~~~~~~g~-------~l~p~~A--~l~lr~L~tL~~ 330 (464)
T PLN02509 285 DVMAGVLAVKGEKLAKEV-------------------------YFLQNSEGS-------GLAPFDC--WLCLRGIKTMAL 330 (464)
T ss_pred ccceeEEEeccHHHHHHH-------------------------HHHHHhcCC-------CcCHHHH--HHHHhhhhhHHH
Confidence 3446888876542 2111 000111111 0111111 223444445556
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Q 001579 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
+.++..++|.++++.|++...++
T Consensus 331 R~~r~~~nA~~la~~L~~~p~V~ 353 (464)
T PLN02509 331 RIEKQQENARKIAMYLSSHPRVK 353 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcc
Confidence 66778899999999999875453
No 341
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.58 E-value=2.4e-13 Score=160.35 Aligned_cols=328 Identities=14% Similarity=0.139 Sum_probs=194.9
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..||++.+++..++..+......|...| +...++.+.|+++++.+ .-.++.+||++++++++..+|.
T Consensus 65 ~~lGh~~p~v~~ai~~q~~~~~~~~~~~------------~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~ 132 (433)
T PRK00615 65 LIHGHSHPKICDAIQQGAERGTSYGLTS------------EQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARG 132 (433)
T ss_pred cccCCCCHHHHHHHHHHHHhCCCCCCCC------------HHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHH
Confidence 4578888887777666532211111011 22457888888888653 2346678999999888888887
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHH---HHHhCCC---EEEE-E--c-CCCC----CCCCHHHHHHHHHcCCCCEEEEE
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPA---TAAMCGM---KIVS-V--G-TDAK----GNINIEELRKAAEANRDNLSTLM 735 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa---~a~~~G~---~vv~-V--~-~d~~----g~iD~e~L~~~i~~~~~~taaV~ 735 (1050)
| . +|.+|+ +..++||.... .....+- .... . + ...+ ...|+++|++.++++++++++|+
T Consensus 133 ~---t---gr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI 206 (433)
T PRK00615 133 I---T---GRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVI 206 (433)
T ss_pred h---h---CCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEE
Confidence 6 2 345555 57789996522 1111110 0000 0 0 0000 11378999999987767888888
Q ss_pred EEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCc------c--cCcEEEeCCccccccCCCCCC
Q 001579 736 VTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------I--GADVCHLNLHKTFCIPHGGGG 803 (1050)
Q Consensus 736 vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~------~--GaDv~~~~~hKtf~~P~g~GG 803 (1050)
++.. +..|.+.+ .+++|.++|++||+++|+|.++ .|+ +.|. + .+|++++ .|.++ +|.
T Consensus 207 ~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~----tG~-R~G~~ga~~~~gv~PDi~~~--gK~lg----gG~ 275 (433)
T PRK00615 207 FEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV----TGF-RVAQGGAAAIYHVKPDITVY--GKILG----GGL 275 (433)
T ss_pred ECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc----ccc-cccHhHHHHhcCCCCCeEEE--ccccc----CCc
Confidence 7654 45577652 3679999999999999999875 344 3332 2 3688875 58773 343
Q ss_pred CcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHH
Q 001579 804 PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMA 883 (1050)
Q Consensus 804 Pg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~ 883 (1050)
| +|.+++++++...+... +. ....+++.|++..++++.+.|..+.++.+. ++...+.++|.
T Consensus 276 p-~~av~~~~~i~~~~~~~--~~-------------~~~~~T~~g~p~~~aa~la~L~~i~~~~~~---~~~~~~g~~l~ 336 (433)
T PRK00615 276 P-AAAVVAHKSIMDHLAPE--GT-------------IFQAGTLSGNPLAMAAGKASINLCREQGFY---TQLSTLEQNFL 336 (433)
T ss_pred c-eeeeeecHHHHhhhcCC--CC-------------cccCCCCcccHHHHHHHHHHHHHHhcccHH---HHHHHHHHHHH
Confidence 5 67778888777665210 00 011112335667788888899888766543 44446777887
Q ss_pred HHHhcc-----CCeeecCCCCccceeEEEeccc---ccc---cCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCC
Q 001579 884 KRLEKH-----YPILFRGVNGTVAHEFIVDLRG---LKN---TAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTES 952 (1050)
Q Consensus 884 ~~L~~~-----~~v~~~g~~g~~~~e~i~~~~~---~~~---~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~ 952 (1050)
++|++. +++...+ .|..+ .+.+...+ ++. ........+.+.|.++|+.+....+| .. .++..
T Consensus 337 ~~l~~~~~~~g~~v~~~r-~G~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---~~--~ls~~ 409 (433)
T PRK00615 337 SPIEEMIRSQGFPVSLVR-YGSMF-SFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFE---AS--FLSSA 409 (433)
T ss_pred HHHHHHHHHcCCCeEEEe-eceEE-EEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcccc---cc--ceecC
Confidence 777663 3332222 23221 12221111 000 00001236888899999987644333 12 24455
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH
Q 001579 953 ESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 953 ~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
+|++|||++++++.++++.+-.
T Consensus 410 ht~~did~~~~a~~~~~~~~~~ 431 (433)
T PRK00615 410 HSMENLDYAQNVLIDSLEKVFS 431 (433)
T ss_pred CCHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999887643
No 342
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.58 E-value=5.3e-13 Score=155.78 Aligned_cols=213 Identities=20% Similarity=0.219 Sum_probs=151.4
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---h
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~ 289 (1050)
..++++.+|++.|.+. +..+.+|++++.++++++ .. +||+||++...|+++...+...++.+|++++.++. +
T Consensus 63 ~~~Le~~lA~~~g~~~--~i~~~sG~~Ai~~~l~al-l~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e 137 (388)
T PRK07811 63 RTALEEQLAALEGGAY--GRAFSSGMAATDCLLRAV-LR--PGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLD 137 (388)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHHHHH-hC--CCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHH
Confidence 4567889999999886 456678888888777665 23 89999999999998888776666778999998865 4
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +..+.+....|..+|+||+++|. |.|++|-
T Consensus 138 ~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD-~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~--- 213 (388)
T PRK07811 138 AVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVD-NTFASPYLQQPLALGADVVVHSTTKYIGGHS--- 213 (388)
T ss_pred HHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCcEEEecCceeecCCC---
Confidence 5555 7788999999998 67999999999999999999999994 45566655567778999999998 7775331
Q ss_pred CcceEEEEEeh-hhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001579 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1050)
Q Consensus 367 GP~~G~la~~~-~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1050)
+--+|++++++ ++.+++. ..|..-| .+ ..++ .| |+...+-+-+..
T Consensus 214 ~~~gG~vv~~~~~l~~~~~-------------------------~~~~~~g---~~-~s~~---~a--~l~~~~L~tl~~ 259 (388)
T PRK07811 214 DVVGGALVTNDEELDEAFA-------------------------FLQNGAG---AV-PGPF---DA--YLTLRGLKTLAV 259 (388)
T ss_pred CcEEEEEEECCHHHHHHHH-------------------------HHHHhcC---CC-CCHH---HH--HHHHhccCcHHH
Confidence 11247777754 3433221 0001001 00 0111 11 233444455666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Q 001579 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
+.++..+++..+++.|++..+++
T Consensus 260 R~~~~~~na~~la~~L~~~p~v~ 282 (388)
T PRK07811 260 RMDRHSENAEAVAEFLAGHPEVS 282 (388)
T ss_pred HHHHHHHHHHHHHHHHHhCCCee
Confidence 67777889999999999885465
No 343
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.58 E-value=7.4e-13 Score=155.11 Aligned_cols=297 Identities=14% Similarity=0.138 Sum_probs=182.1
Q ss_pred ccHHHHHHHHHHHHHHhhCCC---ee-eeccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCC
Q 001579 628 QGYQEMFNNLGEWLCTITGFD---SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d---~~-~l~~~sGa~-ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~ 702 (1050)
+|..++.+.+.+++.+..|.+ .. .+..+.|++ +.. ++++.+. .+| +.+++|+++...+..+...+.+.|+
T Consensus 65 ~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~---~~~~~l~-~~~-~~gd~vlv~~P~y~~~~~~~~~~g~ 139 (396)
T PRK09147 65 AGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALF---AFAQTVI-DRD-GPGPLVVCPNPFYQIYEGAALLAGA 139 (396)
T ss_pred CCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHH---HHHHHHc-CCC-CCCCEEEEcCCCccchHHHHHhcCC
Confidence 576677777777777776854 32 455555544 332 3333322 220 1267899998877666667889999
Q ss_pred EEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-cccc
Q 001579 703 KIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGL 776 (1050)
Q Consensus 703 ~vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~gl 776 (1050)
+++.||++++ ..+|+++|++++. ++++++++++| |.+|.+- +.+++|+++|+++|+++++|.++..- ..+-
T Consensus 140 ~~~~vp~~~~~~~~~d~~~l~~~~~---~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~ 216 (396)
T PRK09147 140 EPYFLNCDPANNFAPDFDAVPAEVW---ARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEA 216 (396)
T ss_pred EEEEeccCccccCccCHHHHHHHHh---hccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCC
Confidence 9999999754 4699999998886 57899999999 5788774 36899999999999999999986421 1110
Q ss_pred -CCCC------cccCc-----EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCc
Q 001579 777 -TSPG------YIGAD-----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 844 (1050)
Q Consensus 777 -~~pg------~~GaD-----v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~s 844 (1050)
..+. ..+.| +++.++.|.|++| |.++|++++++++...+-.. ......+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~----GlRiG~~~~~~~l~~~~~~~--------------~~~~~~~~ 278 (396)
T PRK09147 217 APPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVP----GLRSGFVAGDAALLKKFLLY--------------RTYHGCAM 278 (396)
T ss_pred CCCchhhhhccccCccccccEEEEeccccccCCc----cceeeeecCCHHHHHHHHHH--------------hhhcccCC
Confidence 0110 12222 6677888987644 78899999887765443100 00001111
Q ss_pred chhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHH
Q 001579 845 APWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA 924 (1050)
Q Consensus 845 a~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~va 924 (1050)
+...+... ..+| ...+-+++..+...++.+.+.+.|++.+.+.. +.+..+ +.++++ .+..+++
T Consensus 279 ~~~~q~a~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~--p~~g~f--~~~~~~-------~~~~~~~ 341 (396)
T PRK09147 279 PPAVQAAS-IAAW-----NDEAHVRENRALYREKFDAVTPILAPVLDVQL--PDAGFY--LWAKVP-------GDDTEFA 341 (396)
T ss_pred CHHHHHHH-HHHh-----cchhHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCeeEE--EEEECC-------CCHHHHH
Confidence 11122211 1112 12233455555556667778888877544322 122221 456654 2457888
Q ss_pred HHHH-HCCcccC-CCCC--------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 925 KRLM-DYGFHGP-TMSW--------PVPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 925 krL~-d~Gi~~~-~~~~--------pv~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
++|. ++|+.+. ...| +..+.+||++.. +.+++++.++.|++++
T Consensus 342 ~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 342 RRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA--PLAECVEAAERIVDFC 394 (396)
T ss_pred HHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 8885 6899753 2222 124689999874 4677877777776654
No 344
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.58 E-value=7.3e-13 Score=157.55 Aligned_cols=328 Identities=16% Similarity=0.249 Sum_probs=202.4
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC----eeeeccCchHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD----SFSLQPNAGAAGEYAGLMV 667 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d----~~~l~~~sGa~ge~a~Lla 667 (1050)
..+|+|.+++..++..+......+.+. -+. .+...++.+.|+++++.. ...++.+||++++++++..
T Consensus 70 ~~lGH~~p~v~~Ai~~q~~~~~~~~~~-~~~--------~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~Alkl 140 (459)
T PRK06931 70 LALGHNHPDVLQSIQDVLTSGLPLHTL-DLT--------TPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKL 140 (459)
T ss_pred ccCCCCCHHHHHHHHHHHhhhcccccc-ccC--------CHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHH
Confidence 467999888887776653211111110 011 133457888999988632 2346668999999999998
Q ss_pred HHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC------------CEEEEEcCCCCC--------CCCHHHH----HH
Q 001579 668 IRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCG------------MKIVSVGTDAKG--------NINIEEL----RK 722 (1050)
Q Consensus 668 ir~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G------------~~vv~V~~d~~g--------~iD~e~L----~~ 722 (1050)
+|.| . +|++|| ...++||....+....| -.+..++..... .-|.+.+ ++
T Consensus 141 Ar~~---t---gr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (459)
T PRK06931 141 AKTY---T---GRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFEN 214 (459)
T ss_pred HHHh---c---CCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHH
Confidence 8876 2 345555 57789998876653221 123445442110 1123333 33
Q ss_pred HHHc---CCCCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc--------cCcEE
Q 001579 723 AAEA---NRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI--------GADVC 787 (1050)
Q Consensus 723 ~i~~---~~~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~--------GaDv~ 787 (1050)
.+++ ..+++++|+++.- ...|++. ..++++.++|+++|+++++|.+ +.|+.+.|.+ -+|++
T Consensus 215 ~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV----~tGfGRtG~~~a~~~~gv~PDiv 290 (459)
T PRK06931 215 FIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEV----QAGFARTGKMFAFEHAGIEPDII 290 (459)
T ss_pred HHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc----hhcCCcCchHHHhhhcCCCCCEE
Confidence 3331 2356889888753 3456654 2499999999999999999986 6777777753 36998
Q ss_pred EeCCccccccCCCCCCCcceeeeecccccCCC-CCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFL-PSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 788 ~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~l-pg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
++ .|.++ +|-| +|.++.++++ +.+ ++. ..+++.|+++.++++.+.|..+..+
T Consensus 291 t~--gK~l~----gG~P-i~av~~~~~~-~~~~~~~-------------------~~~T~~gnpla~aaala~L~~l~~~ 343 (459)
T PRK06931 291 VM--SKAVG----GGLP-LAVLGIKKEF-DAWQPGG-------------------HTGTFRGNQLAMATGLTTLKILKEE 343 (459)
T ss_pred Ee--ccccc----CCcc-eeeeeeHHHH-hhccCCC-------------------CCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 87 58774 4444 6667777654 322 110 1112446778888889999988777
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccccccc-------C--CCCHHHHHHHHHHCCc
Q 001579 867 GLTEASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNT-------A--GIEPEDVAKRLMDYGF 932 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~-------~--g~~~~~vakrL~d~Gi 932 (1050)
++.+ +.....++|.++|+++ ++++ ..|. |.. +-+.+..-+.. . ..-...+.+.|.++|+
T Consensus 344 ~l~~---~~~~~G~~l~~~L~~l~~~~~~i~~vrG~-Glm---~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv 416 (459)
T PRK06931 344 NLAQ---NAAERGEWLKAQLAELQKRYPCIGNVRGR-GLM---IGIEIVDERQPADAMGSYPADGELAAAIQKACFENGL 416 (459)
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHhCCCeEeEecC-ceE---EEEEEccCcccccccccCCccHHHHHHHHHHHHHCCc
Confidence 6544 4446778888888764 3322 2221 322 12222110000 0 0013467788889999
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 933 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 933 ~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
.+.... ..++++++.|+..+|++|||.++++|.+++.++-
T Consensus 417 l~~~~~-~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 417 LLERGG-RNGNVVRLLPPLLITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred EEeecC-CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 874321 1247899999999999999999999999987643
No 345
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.58 E-value=3.4e-13 Score=155.58 Aligned_cols=282 Identities=14% Similarity=0.122 Sum_probs=177.7
Q ss_pred HHHHHHHHHhhCCCe-eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCC
Q 001579 635 NNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1050)
Q Consensus 635 ~el~~~lael~G~d~-~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g 713 (1050)
.++++.+++++|.+. ..+..++|++.. ..++++.+. .++++|+++...+..+...+++.|++++.+++++++
T Consensus 66 ~~lr~~ia~~~~~~~~~~I~~t~G~~~~--i~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~ 138 (356)
T PRK04870 66 AALKAALRAAMGVPAGADVLLGNGSDEL--IQLLALACA-----KPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADF 138 (356)
T ss_pred HHHHHHHHHHhCcCCCCcEEEcCCHHHH--HHHHHHHhc-----CCCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCC
Confidence 468888999998764 245555665422 222233221 246789999876655555578899999999998788
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccc--cC-CCCcccCcEEEe
Q 001579 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG--LT-SPGYIGADVCHL 789 (1050)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~g--l~-~pg~~GaDv~~~ 789 (1050)
.+|+++|++++++ .++++|++++| |.+|.+. +.+++.++++..++++++|+++.. +.. +. ......--+++.
T Consensus 139 ~~d~~~l~~~~~~--~~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~~~ 214 (356)
T PRK04870 139 TLDLPAMLAAIAE--HRPALVFLAYPNNPTGNLF-DDADVERIIEAAPGLVVVDEAYQP-FAGDSWLPRLARFPNLLVMR 214 (356)
T ss_pred CCCHHHHHHHhhc--CCCCEEEEcCCCCCCCCCC-CHHHHHHHHHHCCCEEEEECCchh-hcCcchHHHHhhCCCEEEEe
Confidence 8999999999962 47888999999 4789887 577777777666889999998531 211 10 011122235667
Q ss_pred CCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHH
Q 001579 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1050)
Q Consensus 790 ~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1050)
+++| |++ .|.++|++++++++...+... ....+++ ..++. ++...+. ..+-++
T Consensus 215 S~SK-~~~----~GlRiG~~i~~~~~i~~~~~~--------------~~~~~~~--~~~q~----~a~~~l~--~~~~~~ 267 (356)
T PRK04870 215 TVSK-LGL----AGLRLGYLAGHPAWIAELDKV--------------RPPYNVN--VLTQA----TALFALE--HVDVLD 267 (356)
T ss_pred cchh-hhh----HHHhhhhhhCCHHHHHHHHHc--------------cCCCcCC--HHHHH----HHHHHHh--CHHHHH
Confidence 7788 653 477899999887665443210 0001111 11221 1222222 122355
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC-CCC--CCCEEE
Q 001579 870 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP--VPGTLM 946 (1050)
Q Consensus 870 ~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~-~~p--v~~~lr 946 (1050)
+..++...+++++.+.|++...+.+..+.+. -+.+.++ +..++.+.|.++||.+... .|. ..+.+|
T Consensus 268 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iR 336 (356)
T PRK04870 268 AQAAQLRAERTRLAAALAALPGVTVFPSAAN---FILVRVP--------DAAAVFDGLKTRGVLVKNLSGMHPLLANCLR 336 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEECCCCCe---EEEEECC--------CHHHHHHHHHHCCEEEEECCCCCCCCCCeEE
Confidence 5566666778888888877523322112221 1344442 3578899999999987432 232 357899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHH
Q 001579 947 IEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 947 I~~te~~t~eeid~fv~aL~~i 968 (1050)
|++. +.+++++|+++|.++
T Consensus 337 is~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 337 VTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred EeCC---CHHHHHHHHHHHHHh
Confidence 9986 689999999999875
No 346
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.58 E-value=2e-13 Score=159.77 Aligned_cols=216 Identities=16% Similarity=0.233 Sum_probs=146.1
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+.+ .++|+.+..+++++. . .++++||++...++.+... +...|++++.++.
T Consensus 67 ~~~Le~~lA~l~G~~~~~~-~~sG~~Ai~~~l~~~----l----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 137 (398)
T PRK07504 67 VDMFEKRMCALEGAEDARA-TASGMAAVTAAILCQ----V----KAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG 137 (398)
T ss_pred HHHHHHHHHHHhCCCeeeE-ecCHHHHHHHHHHHH----h----CCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC
Confidence 4578999999999987644 557776654333321 1 2457899988766654332 3457999888862
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++... .+..|.++|+|+++
T Consensus 138 -----~d~e~l~~ai~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~gi~lvvD~a~a~~--~~~~~~~~gaDivv 206 (398)
T PRK07504 138 -----LDLDNWEKAVR---PNTKVFFLESPTNPTLEVI-DIAAVAKIANQAGAKLVVDNVFATP--LFQKPLELGAHIVV 206 (398)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCcEec-CHHHHHHHHHHcCCEEEEECCcccc--ccCCchhhCCCEEE
Confidence 79999999997 789999999995 689887 7999999999999999999986432 23567788999999
Q ss_pred eCCccccccCCCCCCCcc-eeeeecccccC-CCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 789 LNLHKTFCIPHGGGGPGM-GPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~-G~i~v~~~l~~-~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
.++||+|+. .|+++ |+++.++++.. .+... . + ..+...+ + ..||.. .-|-+
T Consensus 207 ~S~sK~l~g----~g~~~GG~vv~~~~~i~~~~~~~---~--------~--~~g~~~s-~-------~~A~~~--l~~L~ 259 (398)
T PRK07504 207 YSATKHIDG----QGRCLGGVVLSDKAWIEEHLQDY---F--------R--HTGPSLS-P-------FNAWTL--LKGLE 259 (398)
T ss_pred eeccccccC----CccceEEEEEeCcHHHHHHHHHH---H--------H--HhCCCCC-H-------HHHHHH--Hhccc
Confidence 999999952 23444 56666654332 11100 0 0 0011111 1 112333 33444
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 867 GLTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
-+....++..+|+..+++.|+++ ..|.|+|
T Consensus 260 tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~ 292 (398)
T PRK07504 260 TLPVRVRQQTESAAAIADFLAGHPKVARVIYPG 292 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCccEEECCC
Confidence 56666677779999999999875 3456665
No 347
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.58 E-value=4.6e-13 Score=153.70 Aligned_cols=284 Identities=19% Similarity=0.229 Sum_probs=187.7
Q ss_pred HHHHHHHHHHhhC-CCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC
Q 001579 634 FNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1050)
Q Consensus 634 i~el~~~lael~G-~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~ 712 (1050)
..++++.+++.+| .+..++..+.|+... +-..++.+.. +++.|+++....+.+..+++..|.+++.|+.++
T Consensus 59 ~~~l~~a~a~~~~~~~~~~V~~gnGsde~--i~~l~~~~~~-----~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~- 130 (356)
T COG0079 59 YRELRAALAEYYGVVDPENVLVGNGSDEL--IELLVRAFVE-----PGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE- 130 (356)
T ss_pred HHHHHHHHHHHhCCCCcceEEEcCChHHH--HHHHHHHhhc-----CCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-
Confidence 4478889999999 665566666676532 3334555532 457899988777777778999999999999987
Q ss_pred CCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHc--CCEEEEeccccccccccCCCCc-----ccC
Q 001579 713 GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPGY-----IGA 784 (1050)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~--G~~v~vD~A~~~al~gl~~pg~-----~Ga 784 (1050)
+..|++++.+.++ +++..|++++|| .+|..- +.++|.+++... +++|++|+|.. -|..+.. ..-
T Consensus 131 ~~~d~~~~~~~~~---~~~~lv~i~nPNNPTG~~~-~~~~l~~l~~~~~~~~~vVvDEAY~----eF~~~~~~~l~~~~~ 202 (356)
T COG0079 131 FRLDLDAILAAIR---DKTKLVFLCNPNNPTGTLL-PREELRALLEALPEGGLVVIDEAYI----EFSPESSLELLKYPP 202 (356)
T ss_pred cccCHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEeCchh----hcCCchhhhhccCCC
Confidence 9999999999997 689999999995 789876 455555555443 88999998853 2322211 122
Q ss_pred cEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
+++++ +||+.-||..|-++|+...+++++..+.- ....-++++ ....++.+.+.-
T Consensus 203 nlivl---RTfSKa~gLAGlRlGy~ia~~~~i~~l~~--------------vr~p~~v~~------~a~~aa~aal~~-- 257 (356)
T COG0079 203 NLIVL---RTFSKAFGLAGLRVGYAIANPELIAALNK--------------VRPPFNVSS------PALAAAIAALRD-- 257 (356)
T ss_pred CEEEE---EecHHhhhcchhceeeccCCHHHHHHHHH--------------hcCCCCCCH------HHHHHHHHHccc--
Confidence 36655 55555566778999998888887765421 000112221 111112222211
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC-C-C
Q 001579 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW-P-V 941 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~-p-v 941 (1050)
.+-+++..+.....+.+|.+.|+++ +.-+++.. .+=+.+++.. +. ..++.+.|.++||.+..... + .
T Consensus 258 ~~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~----aNFvlv~~~~-----~~-~~~l~~~L~~~giivR~~~~~~~~ 327 (356)
T COG0079 258 ADYLEESVERIREERERLYAALKALGLFGVFPSQ----ANFVLVRVPD-----AE-AAALAEALLKKGILVRDCSSVGLL 327 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCC----CcEEEEECCC-----cc-HHHHHHHHHHCCEEEEeCCCCCCC
Confidence 1335566666777788999999875 22123321 2224556541 23 56899999999999875432 2 3
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 942 PGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 942 ~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
.+++||++ -|.||.|+|+++|.+++..
T Consensus 328 ~~~lRitv---gt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 328 PGYLRITV---GTPEENDRLLAALREVLKG 354 (356)
T ss_pred CCeEEEEe---CCHHHHHHHHHHHHHHHhc
Confidence 46999998 4788999999999988754
No 348
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.58 E-value=2.8e-13 Score=157.80 Aligned_cols=212 Identities=22% Similarity=0.211 Sum_probs=150.6
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcC--chh
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD--LKD 290 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~--~~~ 290 (1050)
..++++.+|+++|.+. +.++.+|++++.++++++ +. +||+|+++...|+++...++.. +..|++++.++ .++
T Consensus 55 ~~~lE~~lA~l~g~~~--~l~~~sG~~Ai~~~l~~l-l~--~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~d~~~ 128 (385)
T PRK08574 55 LRPLEEALAKLEGGVD--ALAFNSGMAAISTLFFSL-LK--AGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYPSTED 128 (385)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECCCHHH
Confidence 3457799999999864 677899998887776654 23 8999999999999999888764 56789888764 356
Q ss_pred hhc-cCC-CeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 291 IDY-KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 291 l~~-l~~-~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
+++ +++ ++++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.++...|.++|+|++++|. |.|++| |
T Consensus 129 l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD-~t~a~~~~~~~l~~GaDivv~S~sK~l~g~---~ 204 (385)
T PRK08574 129 IIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVD-NTFATPLLYRPLRHGADFVVHSLTKYIAGH---N 204 (385)
T ss_pred HHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCcEEEeeCceeecCC---C
Confidence 766 776 8999999887 78999999999999999999999994 45666666567789999999998 777643 2
Q ss_pred CcceEEEEE-ehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001579 367 GPHAAFLAT-SQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1050)
Q Consensus 367 GP~~G~la~-~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1050)
..-+|.+.+ ++++..++- ..|+-.|+. . +++ .| |+...+-+-+..
T Consensus 205 d~~gG~vi~~~~~~~~~~~-------------------------~~~~~~g~~-~---~p~---~a--~l~l~~l~tL~~ 250 (385)
T PRK08574 205 DVVGGVAVAWSGEFLEELW-------------------------EWRRRLGTI-M---QPF---EA--YLVLRGLKTLEV 250 (385)
T ss_pred CceeEEEEECcHHHHHHHH-------------------------HHHHhcCCC-C---CHH---HH--HHHHcccCcHHH
Confidence 222454444 444443320 001111110 0 111 11 234455555666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Q 001579 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
..++..+++.++++.|++.+.++
T Consensus 251 R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 251 RFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcC
Confidence 77778889999999999875454
No 349
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.58 E-value=5.9e-13 Score=154.72 Aligned_cols=291 Identities=21% Similarity=0.231 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcC-CCCCccHHHHHhCCCEE---EEEc
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPV-SAHGTNPATAAMCGMKI---VSVG 708 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~-saHgt~pa~a~~~G~~v---v~V~ 708 (1050)
...++++.+++++|.+.+ +..++|+++.+.++.+++.+...+| .++++|++++ ++||.........+-.+ ...+
T Consensus 70 ~~~~l~~~la~~~g~~~~-~~~~sg~~a~~~a~~~~~~~~~~~~-~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~ 147 (379)
T TIGR00707 70 PQEELAEKLVEHSGADRV-FFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEP 147 (379)
T ss_pred HHHHHHHHHHhhCCCCEE-EEeCCcHHHHHHHHHHHHHHhhccC-CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCC
Confidence 466899999999998854 6678888888777776665533222 1346777654 66765444322211111 1112
Q ss_pred CCCCCC----CCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc---cCHHHHHHHHHHcCCEEEEecccccccc--ccCC
Q 001579 709 TDAKGN----INIEELRKAAEANRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQV--GLTS 778 (1050)
Q Consensus 709 ~d~~g~----iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~--gl~~ 778 (1050)
...+.. .|+++|+++++ +++++|+++.++ +.|++. +++++|.++|+++|+++++|+++. .++ +...
T Consensus 148 ~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~ 223 (379)
T TIGR00707 148 LVPGFSYAPYNDIESLKKAID---DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFF 223 (379)
T ss_pred CCCCceeeCCCCHHHHHHHhh---hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhh
Confidence 222211 28999999997 678999997554 456542 258999999999999999999863 121 1000
Q ss_pred C-Cc--ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHH
Q 001579 779 P-GY--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPI 855 (1050)
Q Consensus 779 p-g~--~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~ 855 (1050)
+ .. ...|++++ +|+|+ +|.++|++++++++...+..... . ...+. ++....+
T Consensus 224 ~~~~~~~~~d~~t~--sK~~~-----~G~riG~~~~~~~~~~~~~~~~~------------~--~~~~~----~~~~~~a 278 (379)
T TIGR00707 224 AYEHYGIEPDIITL--AKGLG-----GGVPIGATLAKEEVAEAFTPGDH------------G--STFGG----NPLACAA 278 (379)
T ss_pred hHHhcCCCCCEEEE--ccccc-----CCcccEEEEEcHHHHhhhcCCCC------------C--CCCCC----CHHHHHH
Confidence 1 11 23576654 68884 46789999998777665421000 0 01111 2333445
Q ss_pred HHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 001579 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1050)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~ 934 (1050)
+++.+..+...+ ..++...++++++++|++. .........+ ...-+.+.+. .+..++.++|.++||.+
T Consensus 279 a~aaL~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~g~~~~~~~~-------~~~~~~~~~l~~~Gv~v 347 (379)
T TIGR00707 279 ALAVLEVIEKER---LLENVKEKGDYFKERLEELGKNYPNKEVRG-KGLMLGIELE-------APCKDIVKKALEKGLLV 347 (379)
T ss_pred HHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHhhCCCCcccc-CceEEEEEec-------CcHHHHHHHHHHCCcEE
Confidence 566666554333 3344556788888888764 2221100000 0111334443 13578999999999987
Q ss_pred CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 935 PTMSWPVPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 935 ~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
.... .+.+||+++...|.++|+++++.|+++
T Consensus 348 ~~~~---~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 348 NCAG---PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred eeCC---CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 5322 378999999889999999999999875
No 350
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.57 E-value=7.5e-13 Score=155.34 Aligned_cols=263 Identities=14% Similarity=0.123 Sum_probs=159.3
Q ss_pred CCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHH
Q 001579 679 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEIC 753 (1050)
Q Consensus 679 ~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~--~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~ 753 (1050)
++++|+++...+..+...++..|++++.++++. ++.+|+++|+++++ +++++|++++|+ .+|.+. +++++|+
T Consensus 118 ~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~ 194 (401)
T TIGR01264 118 AGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID---EKTAALIVNNPSNPCGSVFSRQHLEEIL 194 (401)
T ss_pred CCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc---cCceEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 457899988766555566788999999998864 36799999999886 578889999994 788774 3699999
Q ss_pred HHHHHcCCEEEEeccccc-cccccC-CC-CcccC--c-EEEeCCccccccCCCCCCCcceeeeeccc------ccCCCCC
Q 001579 754 KIIHDNGGQVYMDGANMN-AQVGLT-SP-GYIGA--D-VCHLNLHKTFCIPHGGGGPGMGPIGVKKH------LAPFLPS 821 (1050)
Q Consensus 754 ~la~~~G~~v~vD~A~~~-al~gl~-~p-g~~Ga--D-v~~~~~hKtf~~P~g~GGPg~G~i~v~~~------l~~~lpg 821 (1050)
++|+++|+++++|.++.. ...+-. .+ ..+.. . |++.++.|+|++| |-++|++++.+. +...+..
T Consensus 195 ~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~----GlRiG~iv~~~~~~~~~~~~~~~~~ 270 (401)
T TIGR01264 195 AVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVP----GWRLGWIIIHDRRGILRDIRDGLVK 270 (401)
T ss_pred HHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCc----cceEEEEEecCcchhHHHHHHHHHH
Confidence 999999999999998632 111100 11 11111 2 5567788988654 788999998631 1111100
Q ss_pred CccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCcc
Q 001579 822 HPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTV 901 (1050)
Q Consensus 822 ~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~ 901 (1050)
+ . ....+++ ...+.. +..++....++-+++..+...++.+++.+.|+++..+.+..+.+..
T Consensus 271 --~----------~-~~~~~~~--~~~q~a----~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~ 331 (401)
T TIGR01264 271 --L----------S-QRILGPC--TIVQGA----LPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAM 331 (401)
T ss_pred --H----------h-hccCCCC--cHHHHH----HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeee
Confidence 0 0 0001111 112221 2223322123335555566667778888888874122221122222
Q ss_pred ceeEEEecccccccCCCCHHHHHHHHH-HCCcccC-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 902 AHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 902 ~~e~i~~~~~~~~~~g~~~~~vakrL~-d~Gi~~~-~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
+ +.++++........+..++.++|. ++||.+. ...|..++.+||++.. ..++++..++.|.+.+++
T Consensus 332 f--~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 332 Y--MMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV--PVVMMEEACSRIQEFCER 399 (401)
T ss_pred E--EEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC--CHHHHHHHHHHHHHHHhc
Confidence 1 345543100001235678888875 7899864 3334446899999974 467888888888776653
No 351
>PRK03321 putative aminotransferase; Provisional
Probab=99.57 E-value=1.8e-13 Score=157.54 Aligned_cols=282 Identities=14% Similarity=0.140 Sum_probs=179.0
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g 713 (1050)
..++++.+++++|.+..++..++|+++. ...+++.. . .++++|+++...+..++..++..|++++.++.++++
T Consensus 59 ~~~lr~~ia~~~~~~~~~I~~~~G~~~~--l~~~~~~~-~----~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 131 (352)
T PRK03321 59 AVELRAALAEHLGVPPEHVAVGCGSVAL--CQQLVQAT-A----GPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDH 131 (352)
T ss_pred HHHHHHHHHHHhCcCHHHEEECCCHHHH--HHHHHHHh-c----CCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCC
Confidence 4577888899999876555556676532 22223322 1 246789998764444555578899999999998778
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHH--cCCEEEEeccccc-cccccCCCC----cccCc
Q 001579 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMN-AQVGLTSPG----YIGAD 785 (1050)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~--~G~~v~vD~A~~~-al~gl~~pg----~~GaD 785 (1050)
.+|+++++++++ +++++|++++| |.+|.+. +.++|.++|+. +|+++++|+++.. ...+...+. +...+
T Consensus 132 ~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 207 (352)
T PRK03321 132 THDLDAMAAAIT---DRTRLIFVCNPNNPTGTVV-TPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPN 207 (352)
T ss_pred CCCHHHHHHhhc---cCCCEEEEeCCCCCcCCCc-CHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCC
Confidence 899999999996 68889999999 5789987 78999999987 5899999998631 111111111 11123
Q ss_pred -EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 786 -VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 786 -v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
+++.++.|+|++| |-++|++++++++.+.+... . ...+.+...+. ++.+.+. .
T Consensus 208 vi~~~S~SK~~g~~----GlRiG~~v~~~~~~~~~~~~--------------~--~~~~~s~~~q~----~a~~~l~--~ 261 (352)
T PRK03321 208 VVVLRTFSKAYGLA----GLRVGYAVGHPEVIAALRKV--------------A--VPFSVNSLAQA----AAIASLA--A 261 (352)
T ss_pred EEEEecchHHhhhH----HHhhhhhcCCHHHHHHHHHh--------------c--CCCCCCHHHHH----HHHHHhc--C
Confidence 4456788888533 56799999987766544210 0 01111111121 1222222 2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCC
Q 001579 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPG 943 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~ 943 (1050)
.+.+.+..+......+++.+.|++. +.+ ..+.+.+ +.+++. .+..++.++|.++||.+.... ..
T Consensus 262 ~~~~~~~~~~~~~~r~~~~~~L~~~~~~~--~~~~g~~---i~i~l~-------~~~~~~~~~l~~~gI~v~~~~---~~ 326 (352)
T PRK03321 262 EDELLERVDAVVAERDRVRAALRAAGWTV--PPSQANF---VWLPLG-------ERTADFAAAAAEAGVVVRPFA---GE 326 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCcc--CCCCCCE---EEEeCC-------CCHHHHHHHHHHCCEEEEccC---CC
Confidence 2233444444455567788888764 332 1122322 345542 246789999999999875422 34
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 944 TLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 944 ~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
.|||++ .+.+++++|+++|.++++
T Consensus 327 ~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 327 GVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred cEEEee---CCHHHHHHHHHHHHHHhc
Confidence 699997 478999999999988754
No 352
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.57 E-value=2.7e-13 Score=161.49 Aligned_cols=283 Identities=12% Similarity=0.012 Sum_probs=176.0
Q ss_pred HHHHHHhcCCCCcceeE---ecchHHHHHHHHHHhhhhcCCCCEEEEcC------CCChhHHHHHHHhccCCCeE-----
Q 001579 217 QTMIADLTGLPMSNASL---LDEGTAAAEAMAMCNNIQKGKKKTFIIAS------NCHPQTIDICITRADGFDIK----- 282 (1050)
Q Consensus 217 q~~ia~L~G~~~anasl---~d~~Taa~eA~~la~~~~~~~gd~Vlvs~------~~Hps~~~~~~~~a~~~gi~----- 282 (1050)
++..++++|.+.+...+ ..+|+.|..++++++. . ++|+|+..+ ..|.+.....+- ...++.
T Consensus 86 ~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~-~--pgD~Il~~d~~~gGhl~H~~~~~g~~~--s~~~~~~~~~~ 160 (475)
T PLN03226 86 QKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALL-Q--PHDRIMGLDLPHGGHLSHGYQTDGKKI--SATSIYFESMP 160 (475)
T ss_pred HHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhC-C--CCCEEEECCCCcCcchhhhhhhccccc--ccceEEEEeee
Confidence 45678888887643322 2678888888888762 2 899999855 344444433221 112222
Q ss_pred EEEc------Cchhhhc-cC-CCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCC-----CCcccc
Q 001579 283 VVVS------DLKDIDY-KS-GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKP-----PGELGA 349 (1050)
Q Consensus 283 v~~~------~~~~l~~-l~-~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~-----pg~~Ga 349 (1050)
+.+. |+++|++ +. .+++.|++.. +.+|...|+++|.++||++|++++|+ ..++.|++.. |- .++
T Consensus 161 y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~-S~~s~~~D~a~i~~ia~~~ga~LlvD-~AH~~Gli~~~~~~~p~-~~~ 237 (475)
T PLN03226 161 YRLDESTGLIDYDKLEKKAMLFRPKLIIAGA-SAYPRDWDYARMRKIADKVGALLMCD-MAHISGLVAAQEAASPF-EYC 237 (475)
T ss_pred eeecCCCCCcCHHHHHHHHhhcCCeEEEEec-CcCCCccCHHHHHHHHHHcCCEEEEE-chhhhCcccCCCCCCCC-CCC
Confidence 1222 5667776 43 3566555544 45788889999999999999999993 2445555432 22 279
Q ss_pred eEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHH
Q 001579 350 DIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLA 428 (1050)
Q Consensus 350 Divvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a 428 (1050)
|++++++ |+|++| ..|+++++++.++.+.+. .+...| |....+. .. .....++++. ....+
T Consensus 238 Div~~t~hK~L~GP------~Gg~I~~~~~~~~~~~~g-~~~~~d------~~~~i~~-a~-~~~~~g~p~~---~~iaa 299 (475)
T PLN03226 238 DVVTTTTHKSLRGP------RGGMIFFRKGPKPPKGQG-EGAVYD------YEDKINF-AV-FPGLQGGPHN---HTIAA 299 (475)
T ss_pred eEEEecCcccccCC------CceEEEEchhhcccccCC-CccHHH------HHHHhcc-cc-CCccCCCchH---HHHHH
Confidence 9999998 777544 447899988765443211 110000 1000000 00 0011233332 33444
Q ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCccEEEEecC--C--HHHHHHHHHHcCceeee--
Q 001579 429 NMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCA--D--AHAIASAAYKIEMNLRV-- 501 (1050)
Q Consensus 429 ~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~~~~~v~i~~~--~--~~~i~~~L~~~GI~~~~-- 501 (1050)
+.+++ .++-..|.+++++++++++++|++.|.+.| ++++.. ...+.+.|.+. + ..++.+.|.+.||.+..
T Consensus 300 l~aAl--~~i~~~~~~~~~~~~~~na~~L~~~L~~~G-~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~ 376 (475)
T PLN03226 300 LAVAL--KQAMTPEFKAYQKQVKANAAALANRLMSKG-YKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNA 376 (475)
T ss_pred HHHHH--HHHhCcCHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCC
Confidence 44444 555567889999999999999999999988 998853 22234444442 2 67888999999997643
Q ss_pred -------ecCCeEEE----EeccCCCHHHHHHHHHHHh
Q 001579 502 -------VDSNTVTA----SFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 502 -------~~~~~lri----s~~e~~t~edId~lv~~l~ 528 (1050)
+.+..||+ -.+-..+++|++++++.|.
T Consensus 377 ~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~ 414 (475)
T PLN03226 377 VPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLH 414 (475)
T ss_pred CCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHH
Confidence 23567888 4555678899999999885
No 353
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.57 E-value=4.7e-13 Score=158.58 Aligned_cols=330 Identities=17% Similarity=0.202 Sum_probs=202.0
Q ss_pred cccccccccCcch--hhhhcccccc-ccccCCCCCchhhcccHHHHHHHHHHHHHHhhC---CCeeeeccCchHHHHHHH
Q 001579 591 MIPLGSCTMKLNA--TTEMMPVTWP-SFANIHPFAPADQAQGYQEMFNNLGEWLCTITG---FDSFSLQPNAGAAGEYAG 664 (1050)
Q Consensus 591 ~i~lGs~t~~~~~--~~~~~~~~~~-~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G---~d~~~l~~~sGa~ge~a~ 664 (1050)
...+|++.+++.. ++..+..... .+....-+ ..+...++.+.|+++++ ++. .++.+||+++++++
T Consensus 56 ~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~--------~~~~~~~la~~l~~~~~p~~~~~-v~f~~SGsEAve~A 126 (443)
T PRK08297 56 SSALGMNHPALADDPEFRAELGRAALNKPSNSDV--------YTVEMARFVDTFARVLGDPELPH-LFFVDGGALAVENA 126 (443)
T ss_pred hhcCCCCChHHhhHHHHHHHHHHhhhhccccCCc--------CCHHHHHHHHHHHhhcCCCCCCE-EEEeCchHHHHHHH
Confidence 3468999888877 6555532111 01000001 01234467788888872 333 36789999999999
Q ss_pred HHHHHHHHH----hcCC--CCCCEEE-EcCCCCCccHHHHHhCCCE-----------EEEEcCC--------CC------
Q 001579 665 LMVIRAYHK----ARGD--HHRNVCI-IPVSAHGTNPATAAMCGMK-----------IVSVGTD--------AK------ 712 (1050)
Q Consensus 665 Llair~y~~----~~G~--~~r~~Vl-ip~saHgt~pa~a~~~G~~-----------vv~V~~d--------~~------ 712 (1050)
++.+|.|.. .+|. ++|.+|| +..++||....+....|-. ...++.. .+
T Consensus 127 lKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (443)
T PRK08297 127 LKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEA 206 (443)
T ss_pred HHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhH
Confidence 999998853 2453 2345566 5779999877665443311 0011100 00
Q ss_pred -CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc-----
Q 001579 713 -GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI----- 782 (1050)
Q Consensus 713 -g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~----- 782 (1050)
..-|++++++.++++.+++++|+++.. +..|++. ..+++|.++|++||+++++|.+ +.|+.+.|.+
T Consensus 207 ~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV----~tGfGRtG~~~a~~~ 282 (443)
T PRK08297 207 LEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEV----QTGVGLTGTAWAYQQ 282 (443)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech----hhccCccchHHHHHh
Confidence 001456778888877789999999754 4557663 3699999999999999999986 5667677643
Q ss_pred ---cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHH
Q 001579 783 ---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1050)
Q Consensus 783 ---GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1050)
-+|++++ .|.+ | ..|.++ .+++...... .+.. . ....+++.|+++.++++.+.
T Consensus 283 ~gv~PDiv~~--gK~l--~------~~a~l~-~~~i~~~~~~-~~~~--------~----~~~~~T~~gnpl~~aaa~a~ 338 (443)
T PRK08297 283 LGVRPDIVAF--GKKT--Q------VCGIMA-GRRVDEVEDN-VFAV--------S----SRINSTWGGNLVDMVRARRI 338 (443)
T ss_pred cCCCCCEEEe--cccc--c------ccceec-chHHHHhhhh-hccC--------c----cccCCCCCccHHHHHHHHHH
Confidence 3799886 5875 2 123343 3222111100 0000 0 01112344677778888888
Q ss_pred HHHHChhhHHHHHHHHHHHHHHHHHHHhcc---CCee---ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcc
Q 001579 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH---YPIL---FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFH 933 (1050)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~v~---~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~ 933 (1050)
|..+.++++.+ +...+.++|.++|+++ ++.+ ..|. |.. +.+.+.+ ......+.++|.++|+.
T Consensus 339 L~~l~~~~l~~---~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~-G~~---~~i~~~~-----~~~~~~~~~~l~~~Gvl 406 (443)
T PRK08297 339 LEVIEEDGLVE---NAARQGEYLLARLEELAAEFPAVVSNVRGR-GLM---CAFDLPT-----TADRDEVIRRLWEEGVL 406 (443)
T ss_pred HHHHHhcCHHH---HHHHHHHHHHHHHHHHHHHCCCcceeeecc-ceE---EEEEecC-----HHHHHHHHHHHHHCCEE
Confidence 88887766543 3446778888888764 3321 1221 321 2233321 11246788999999998
Q ss_pred cCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 934 GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 934 ~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
+.... ...+|++|+..+|++|||+++++|.+++.++
T Consensus 407 ~~~~~---~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 407 VLPCG---ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred EecCC---CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 74322 2679999999999999999999999988764
No 354
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.57 E-value=3.1e-13 Score=157.12 Aligned_cols=212 Identities=19% Similarity=0.188 Sum_probs=154.5
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 290 (1050)
.++++.+|++.|.+ ++.++.+|++++.++++++ .. +||+|+++...|+.+...+.......|++++.++. ++
T Consensus 56 ~~Le~~lA~leg~e--~ivvt~gg~~Ai~~~l~al-l~--~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 130 (388)
T PRK08861 56 GLLEQTLSELESGK--GAVVTNCGTSALNLWVSAL-LG--PDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAA 130 (388)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHH-cC--CCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHH
Confidence 34668999999964 5888999999888887765 33 89999999999998888776655667899988764 45
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ +.++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.++...|-++|||++++|+ |.+++|.+
T Consensus 131 l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvD-ea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d--- 206 (388)
T PRK08861 131 LDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVD-NTFLTPVLQKPLELGADFVIHSTTKYINGHSD--- 206 (388)
T ss_pred HHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCccccccCCCcccCCCEEEeecceeccCCCc---
Confidence 655 7788999999998 78999999999999999999999994 45566666678889999999998 77754321
Q ss_pred cceEEEEEeh-hhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 368 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 368 P~~G~la~~~-~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
--+|++.+++ ++.+++ ...|..-|. + .++. ..|+...|-+-|.-+
T Consensus 207 ~~gG~i~~~~~~~~~~~-------------------------~~~~~~~G~--~--~~p~-----~a~l~~rgl~Tl~lR 252 (388)
T PRK08861 207 VIGGVLITKTKEHAEEL-------------------------AWWGNCIGA--T--GTPF-----DSYMTLRGIRTLGAR 252 (388)
T ss_pred ceeEEEEecHHHHHHHH-------------------------HHHHhccCC--C--CChH-----HHHHHHhcCCCHHHH
Confidence 1246776654 332222 001111110 0 0111 124566677777777
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.+|..++|..+++.|++.+.++
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~ 274 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVG 274 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 8888999999999999875453
No 355
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.57 E-value=1.9e-13 Score=158.93 Aligned_cols=283 Identities=17% Similarity=0.194 Sum_probs=181.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|+.+..+ + +. .. .++++||++...|+.+... +...|++++.++.
T Consensus 49 ~~~le~~la~l~g~~~~-l~~~sG~~al~~-~--l~-ll-----~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 118 (378)
T TIGR01329 49 RTALESLLAKLDKADRA-FAFSSGMAALDV-I--TR-LL-----NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT 118 (378)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHH-H--HH-Hh-----CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC
Confidence 56899999999999754 445677655432 2 22 11 2467899988777654432 4558999999986
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|++++||+++... ....|.++|+|+++
T Consensus 119 -----~d~~~le~~i~---~~tklv~le~psnptg~v~-dl~~I~~la~~~g~~vivD~a~~~~--~~~~~l~~g~Di~v 187 (378)
T TIGR01329 119 -----TDLDKVKAALG---PKTKLVLLESPTNPLQKIV-DIRKISEMAHAQNALVVVDNTMMSP--LLCNPLELGADIVY 187 (378)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCeee-cHHHHHHHHHHcCCEEEEECCCccc--ccCChhhcCCcEEE
Confidence 38999999997 78999999999 5689887 8999999999999999999986432 23467778999999
Q ss_pred eCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
+++||+++.| ++...|++++++ .+.+.+.. . + ...+... ++. -+++...+.+-
T Consensus 188 ~S~tK~l~G~---~~~~~G~v~~~~~~~~~~~~~-~-----------~-~~~G~~~-~~~---------~a~l~~~~l~t 241 (378)
T TIGR01329 188 HSATKFLAGH---SDVMAGVLAVKGEEIAKKVYF-L-----------Q-NSTGSGL-APF---------DCWLLLRGIKT 241 (378)
T ss_pred EecceeccCC---ccceeEEEEeCcHHHHHHHHH-H-----------H-HhcCCcC-CHH---------HHHHHHccCCC
Confidence 9999999522 122378888864 33232210 0 0 0001111 111 12334455566
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeecCCCCc--------cc--eeEEEecccccccCCCC-HHHHHHHHHHCCcc
Q 001579 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNGT--------VA--HEFIVDLRGLKNTAGIE-PEDVAKRLMDYGFH 933 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~---~~v~~~g~~g~--------~~--~e~i~~~~~~~~~~g~~-~~~vakrL~d~Gi~ 933 (1050)
+....++...|+..+++.|+++ -.+.|++-.+. .+ ...+|.+. ++ +.+ +.+++++|...++.
T Consensus 242 l~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~-~~---~~~~~~~~~~~L~~~~i~ 317 (378)
T TIGR01329 242 LAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFE-TG---SVALSKRLVEATKLFSIT 317 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEE-EC---CHHHHHHHHHhCcCcccc
Confidence 7777788888999999999875 23455442110 00 11233332 11 223 56888888766554
Q ss_pred cC--C---C-CCC-----------------C-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 934 GP--T---M-SWP-----------------V-PGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 934 ~~--~---~-~~p-----------------v-~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
++ . + ..| + ++.+|+++. .|+.|.+++.|.++++.
T Consensus 318 ~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 318 VSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG----IEDVDDLISDLDIAFVT 375 (378)
T ss_pred cCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHHh
Confidence 31 1 1 011 1 357899876 46777888888887764
No 356
>PLN02187 rooty/superroot1
Probab=99.57 E-value=1.1e-12 Score=156.37 Aligned_cols=310 Identities=14% Similarity=0.141 Sum_probs=183.2
Q ss_pred cccHHHHHHHHHHHHHHhhCC--CeeeeccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 627 AQGYQEMFNNLGEWLCTITGF--DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~--d~~~l~~~sG-a~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
.+|..++.+.+.+++.+-.|. +...+..+.| .+|.. ++++.+. .++++|++++..+..+...+...|++
T Consensus 107 ~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~---~~~~~l~-----~pGd~Vlv~~P~y~~y~~~~~~~g~~ 178 (462)
T PLN02187 107 GAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIE---IVFESLA-----RPNANILLPRPGFPHYDARAAYSGLE 178 (462)
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHH---HHHHHhc-----CCCCEEEEeCCCCccHHHHHHHcCCE
Confidence 357666666666666554443 3334444444 44443 3333331 24588999988776666668889999
Q ss_pred EEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc--
Q 001579 704 IVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-- 775 (1050)
Q Consensus 704 vv~V~~d~--~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~g-- 775 (1050)
++.++..+ +..+|+++|+++++ ++++++++++|+ .+|.+- +.+++|+++|+++|+++++|.++..- +.+
T Consensus 179 ~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~ 255 (462)
T PLN02187 179 VRKFDLLPEKEWEIDLEGIEAIAD---ENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNP 255 (462)
T ss_pred EEEEeCccccCCccCHHHHHHhcC---CCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC
Confidence 99998743 46899999999986 688999999994 789874 35999999999999999999986421 111
Q ss_pred cCCCCcccC--c-EEEeCCccccccCCCCCCCcceeeeec-cc-c---cCCCCCCccccCCCCCCCCCCCCCCCC--Ccc
Q 001579 776 LTSPGYIGA--D-VCHLNLHKTFCIPHGGGGPGMGPIGVK-KH-L---APFLPSHPVVSTGGIPAPEKSQPLGTI--AAA 845 (1050)
Q Consensus 776 l~~pg~~Ga--D-v~~~~~hKtf~~P~g~GGPg~G~i~v~-~~-l---~~~lpg~~vg~~~~~~~~~~~~~t~~i--~sa 845 (1050)
+.....+.. . +++.++.|+|++| |.++|++++. ++ + ...+-. . +....+ +.+
T Consensus 256 ~~s~~~~~~~~~vi~l~SfSK~f~~p----GlRiG~~v~~~p~~~~~~~~~~~~-~-------------~~~~~~~~~~s 317 (462)
T PLN02187 256 FVSMGKFASIVPVLTLAGISKGWVVP----GWKIGWIALNDPEGVFETTKVLQS-I-------------KQNLDVTPDPA 317 (462)
T ss_pred ceeHHHhccCCcEEEEecchhhcCCc----cceeEEEEecCchhHHHHHHHHHH-H-------------HHhccccCCCC
Confidence 101111211 1 4566788998765 8999999974 22 1 111100 0 000011 111
Q ss_pred hhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCC-CHHHH
Q 001579 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDV 923 (1050)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~-~~~~v 923 (1050)
...+.. +.+++.....+-+++..+...++.+++.+.|+++ ....+..+.+..+ +.+++.. ....++ +..++
T Consensus 318 ~~~Q~a----~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~f--l~~~l~~-~~~~~~~~~~~~ 390 (462)
T PLN02187 318 TIIQAA----LPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTY--LLTKLEL-SLMDNIKDDIDF 390 (462)
T ss_pred HHHHHH----HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEE--EEeecCh-hhCCCCCCHHHH
Confidence 122221 2222221123345556666667788899999875 1111111222121 2334321 000122 34466
Q ss_pred HHH-HHHCCccc-CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 924 AKR-LMDYGFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 924 akr-L~d~Gi~~-~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
+.+ +.++|+.+ +...|...+++||+++. ..+.++..++.|.++++...+
T Consensus 391 ~~~ll~~~gV~v~pG~~fg~~~~iRis~~~--~~e~l~~al~rL~~~l~~~~~ 441 (462)
T PLN02187 391 CVKLAREENLVFLPGDALGLKNWMRITIGV--EAHMLEDALERLKGFCTRHAK 441 (462)
T ss_pred HHHHHhhCCEEEECccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHHhhh
Confidence 555 47889875 33345446899999974 577888888888888765554
No 357
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.57 E-value=1e-12 Score=154.09 Aligned_cols=215 Identities=23% Similarity=0.241 Sum_probs=150.9
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch---
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 289 (1050)
..++++.+|++.|.+. +.++.+|++++..++.+. +. +||+||++...|+.+...+...++..|++++.+|.+
T Consensus 67 ~~~le~~lA~l~g~~~--~i~~~sG~~Al~~~l~~l-l~--~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 141 (403)
T PRK07503 67 LALLEQRMASLEGGEA--AVALASGMGAITATLWTL-LR--PGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPA 141 (403)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-cC--CCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHH
Confidence 3457789999999875 567889998877666554 33 899999999999877776665567789999998764
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++++ +..+.+....|..+|+|++++|. |.|++| |
T Consensus 142 ~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD-~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~---g 217 (403)
T PRK07503 142 ALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVD-NTYCTPYLQRPLELGADLVVHSATKYLGGH---G 217 (403)
T ss_pred HHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEccccccccCC---C
Confidence 4555 7788999999888 78999999999999999999999994 45555555556678999999998 777532 3
Q ss_pred CcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 367 GPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 367 GP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
+..+|++..++++.+++.. .+ . +. ....|. +++ .|+ +...+-+-+...
T Consensus 218 d~~gG~v~~~~~l~~~l~~--~~---------------------~-~~--~~g~~~-s~~---~a~--l~l~~L~tl~~r 265 (403)
T PRK07503 218 DITAGLVVGGKALADRIRL--EG---------------------L-KD--MTGAVM-SPF---DAF--LLMRGLKTLALR 265 (403)
T ss_pred ceeEEEEEcCHHHHHHHHh--hh---------------------H-Hh--CcCCCC-CHH---HHH--HHHcCcchHHHH
Confidence 3336888877776655410 00 0 00 001111 122 121 233344445555
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.++..+++..+++.|++.+.++
T Consensus 266 ~~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 266 MDRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 5777789999999999875454
No 358
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.57 E-value=1.2e-12 Score=152.77 Aligned_cols=299 Identities=13% Similarity=0.118 Sum_probs=179.4
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--eeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv 705 (1050)
+|..++.+.+.+++.+-.|+. ...+..++|++. +..++++++. .++++|+++...++.+...+...|.+++
T Consensus 66 ~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~--al~~~~~~~~-----~~gd~vlv~~p~y~~~~~~~~~~g~~~~ 138 (384)
T PRK06348 66 GGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACH--GMYLALQSIL-----DPGDEVIIHEPYFTPYKDQIEMVGGKPI 138 (384)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHH--HHHHHHHHhc-----CCCCEEEEeCCCCcchHHHHHHcCCEEE
Confidence 566566666666666555543 334444555442 2223334331 2457899998877767777888999999
Q ss_pred EEcCCC-C-CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccccCCC
Q 001579 706 SVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLTSP 779 (1050)
Q Consensus 706 ~V~~d~-~-g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~gl~~p 779 (1050)
.++.++ + ..+|+++|+++++ +++++|++++| |.+|.+. +.+++|+++|+++|+++++|.++..- ...-..+
T Consensus 139 ~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~ 215 (384)
T PRK06348 139 ILETYEEDGFQINVKKLEALIT---SKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVP 215 (384)
T ss_pred EecCCcCcCCcCCHHHHHHhhC---cCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccc
Confidence 998743 3 4699999999986 67888999999 4688774 35899999999999999999986321 1110011
Q ss_pred -Cc----ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHH
Q 001579 780 -GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILP 854 (1050)
Q Consensus 780 -g~----~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~ 854 (1050)
.. .+-.+++.++.|+|++| |-++|++.+.+++...+-.. ......+.+...+..
T Consensus 216 ~~~~~~~~~~vi~~~SfSK~~~l~----GlRiG~~v~~~~~~~~~~~~--------------~~~~~~~~~~~~q~~--- 274 (384)
T PRK06348 216 MATLAGMPERTITFGSFSKDFAMT----GWRIGYVIAPDYIIETAKII--------------NEGICFSAPTISQRA--- 274 (384)
T ss_pred hhhcCCCcCcEEEEecchhccCCc----cccceeeecCHHHHHHHHHH--------------HHhccCCCCHHHHHH---
Confidence 11 12236677888988644 67899999887665443100 000111111122221
Q ss_pred HHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCCcc
Q 001579 855 ISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFH 933 (1050)
Q Consensus 855 ~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~Gi~ 933 (1050)
+..++. ...+-+++..+....+.+++.+.|+++..+.+..+.+.++ ++++++. .+.+..++++.|. ++|+.
T Consensus 275 -~~~~l~-~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~--~~~~~~~----~~~~~~~l~~~l~~~~gv~ 346 (384)
T PRK06348 275 -AIYALK-HRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIY--AFINIKK----TGLSSVEFCEKLLKEAHVL 346 (384)
T ss_pred -HHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEE--EEEeccc----CCCCHHHHHHHHHHhCCEE
Confidence 122222 1222244444555566788888887642222222222221 3455541 1456788998876 67998
Q ss_pred cC-CCCCCC--CCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001579 934 GP-TMSWPV--PGTLMIEPTESESKEELDRYCDALIS 967 (1050)
Q Consensus 934 ~~-~~~~pv--~~~lrI~~te~~t~eeid~fv~aL~~ 967 (1050)
+. ...|.. .+.+||+++ .+.++++..++.|++
T Consensus 347 v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~ 381 (384)
T PRK06348 347 VIPGKAFGESGEGYIRLACT--VGIEVLEEAFNRIEK 381 (384)
T ss_pred EcCchhhccCCCCeEEEEec--CCHHHHHHHHHHHHh
Confidence 53 333432 478999985 467777777776654
No 359
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.57 E-value=2.9e-13 Score=159.59 Aligned_cols=144 Identities=22% Similarity=0.259 Sum_probs=115.4
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcC-c---
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD-L--- 288 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~-~--- 288 (1050)
..++++.+|++.|.+ .+..+.+||+++.++++++ + ++||+||++..+|.++...+...++.+|++++++| .
T Consensus 71 ~~~le~~la~l~g~~--~~v~fsSG~~Ai~~al~~l-l--~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~ 145 (437)
T PRK05613 71 VEALENRIASLEGGV--HAVAFASGQAAETAAILNL-A--GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDP 145 (437)
T ss_pred HHHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHHh-c--CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCH
Confidence 456789999999985 4778888888887776654 2 27999999999999997766555667899999986 3
Q ss_pred hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecCcccccc
Q 001579 289 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSAQRFGVP 362 (1050)
Q Consensus 289 ~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~k~~g~P 362 (1050)
+++++ ++++|++|++..+ |.+|.+.|+++|+++||++|++++|++ .++.+.+..|.++|||++++|++++.+|
T Consensus 146 e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~-t~a~g~~~~p~~~GaDivv~S~~K~l~G 220 (437)
T PRK05613 146 ESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDN-TIATAALVRPLELGADVVVASLTKFYTG 220 (437)
T ss_pred HHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEEC-CCccccccChHHhCCCEEEeeccceecC
Confidence 45665 7888998888665 888999999999999999999999943 4566766677899999999999555333
No 360
>PRK06148 hypothetical protein; Provisional
Probab=99.57 E-value=4e-13 Score=173.15 Aligned_cols=328 Identities=17% Similarity=0.213 Sum_probs=206.6
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..+|+|.+.+..++..+.... .+.+ -|. .+...++.+.|++++..+ ...++.|||+++++++++.+|.
T Consensus 634 ~~lGH~hp~v~~Ai~~q~~~l-~~~~--~~~--------~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~ 702 (1013)
T PRK06148 634 CHVGHAHPRVVAAAARQAARL-NTNT--RYL--------HDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARA 702 (1013)
T ss_pred hhcCCCCHHHHHHHHHHHhhc-CCcC--CcC--------CHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHH
Confidence 468888888877776653221 1111 111 123457888999988532 2346789999999988888887
Q ss_pred HHHhcCCCCCCEEEEcCCCCCccHHHHHhCC------------CEEEEEcCCCC-----CCCC-------HHHHHHHHH-
Q 001579 671 YHKARGDHHRNVCIIPVSAHGTNPATAAMCG------------MKIVSVGTDAK-----GNIN-------IEELRKAAE- 725 (1050)
Q Consensus 671 y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G------------~~vv~V~~d~~-----g~iD-------~e~L~~~i~- 725 (1050)
| .| ++++|....++||....+....| -.+..++.... +..| .+++++.++
T Consensus 703 ~---tG--r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 777 (1013)
T PRK06148 703 H---TG--QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAA 777 (1013)
T ss_pred h---cC--CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHh
Confidence 6 22 33344467789998755432211 11222221100 1111 245666554
Q ss_pred --cCCCCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCc-c------c--CcEEEeC
Q 001579 726 --ANRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY-I------G--ADVCHLN 790 (1050)
Q Consensus 726 --~~~~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~-~------G--aDv~~~~ 790 (1050)
.+++++++|+++.. +..|++. ..++++.++|+++|+++|+|.+ +.|+.+.|. + | +|++++
T Consensus 778 ~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEV----qtGfGRtG~~~~a~e~~gv~PDivt~- 852 (1013)
T PRK06148 778 MAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEV----QVGFGRVGSHWWAFETQGVVPDIVTM- 852 (1013)
T ss_pred hhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEec----ccCCCCCCCcchhhhhcCCCcceeee-
Confidence 34567999988753 4456664 2499999999999999999976 667777764 2 3 689887
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ +| -.+|.+++++++...+.... . ..+++.|+++.++++.+.|..+.++++.+
T Consensus 853 -gK~lg----gG-~Plgav~~~~ei~~~~~~g~----------------~-~~~Tf~gnpla~aaa~a~L~~i~~e~l~~ 909 (1013)
T PRK06148 853 -GKPIG----NG-HPMGAVVTTREIADSFDNGM----------------E-YFNTFGGNPVSCAIGLAVLDIIEDEDLQR 909 (1013)
T ss_pred -ccccc----CC-cceEEEEEcHHHHhhccCCC----------------c-cccCCCCCHHHHHHHHHHHHHHhhccHHH
Confidence 58774 44 34778888887766542110 0 01234567888888999999988776654
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEecccccccCCC----CHHHHHHHHHHCCcccCCCCCCC
Q 001579 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLKNTAGI----EPEDVAKRLMDYGFHGPTMSWPV 941 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~----~~~~vakrL~d~Gi~~~~~~~pv 941 (1050)
++.+..++|.++|+++ ++++ ..|. |.. +-+.+..-. .+.. ....+.++|.++|+.+.... |.
T Consensus 910 ---~~~~~G~~l~~~L~~l~~~~~~i~~VrG~-Gl~---~gvel~~~~-~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~ 980 (1013)
T PRK06148 910 ---NALEIGNYLLAGLRELQDRFDIIGDVRGM-GLF---LGIELVTDR-KTKAPATAIARYVKNGARERGILIGTEG-PH 980 (1013)
T ss_pred ---HHHHHHHHHHHHHHHHHHhCCCceEEeee-ceE---EEEEecCCc-cccCccHHHHHHHHHHHHhCCeEEeccC-CC
Confidence 3446788999999875 3332 2221 222 122221000 0011 13468888999999985432 23
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 942 PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 942 ~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
.+.|||.|+..+|++|||+++++|.+++.++
T Consensus 981 ~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 981 DNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999999999998764
No 361
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.57 E-value=6.2e-13 Score=144.93 Aligned_cols=354 Identities=19% Similarity=0.239 Sum_probs=214.3
Q ss_pred HhccccCcccccccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCCe----eeeccC
Q 001579 580 LQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDS----FSLQPN 655 (1050)
Q Consensus 580 l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d~----~~l~~~ 655 (1050)
++++|+.-..-|--||||- .|.+.|-.|-.+ |+.-+.|- -++..-.|+..-+.+|+|. +++||.
T Consensus 46 IaSENFts~aVmeAlGS~l--tNKYSEGyPG~R--YYGGne~I--------D~iE~LCq~RALeaF~ldp~kWGVNVQp~ 113 (477)
T KOG2467|consen 46 IASENFTSRAVMEALGSCL--TNKYSEGYPGAR--YYGGNEYI--------DQIELLCQKRALEAFGLDPEKWGVNVQPY 113 (477)
T ss_pred eecccchHHHHHHHHhHHh--hcccccCCCccc--ccCcchHH--------HHHHHHHHHHHHHHhCCCHHHCceeeccC
Confidence 4556655433344678874 356666665432 22222221 1222234566677899994 689999
Q ss_pred chHHHHHHHHHHHHHHHHhcCCCCCCEEE---EcCCCCCccHHHHHhCCC-------EEEEEcCCCC-CCCCHHHHHHHH
Q 001579 656 AGAAGEYAGLMVIRAYHKARGDHHRNVCI---IPVSAHGTNPATAAMCGM-------KIVSVGTDAK-GNINIEELRKAA 724 (1050)
Q Consensus 656 sGa~ge~a~Llair~y~~~~G~~~r~~Vl---ip~saHgt~pa~a~~~G~-------~vv~V~~d~~-g~iD~e~L~~~i 724 (1050)
||+-++++...++.. +.++|. .|+.-|-+|.-......+ +-....+|++ |.||.|.|++..
T Consensus 114 SGSPANfavYtall~--------Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A 185 (477)
T KOG2467|consen 114 SGSPANFAVYTALLK--------PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTA 185 (477)
T ss_pred CCCchhhHHHhhhcC--------CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHH
Confidence 999999887776642 234444 355555455433221222 2223345544 999999999998
Q ss_pred HcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEecccccccc---ccCCCCcccCcEEEeCCccccccCCCC
Q 001579 725 EANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV---GLTSPGYIGADVCHLNLHKTFCIPHGG 801 (1050)
Q Consensus 725 ~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~---gl~~pg~~GaDv~~~~~hKtf~~P~g~ 801 (1050)
...+++ .|+.-...+.-.+ |...+.+||.+.|+.+.+|-||..+++ ...+|.++ +||++...||++
T Consensus 186 ~~frPk--~iiaG~SaY~R~~--DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTTTTHKsL------ 254 (477)
T KOG2467|consen 186 TLFRPK--LIIAGTSAYSRLI--DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY-CDIVTTTTHKSL------ 254 (477)
T ss_pred HhcCCc--EEEeccccchhhc--cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc-cceeeccccccc------
Confidence 754444 4554433344444 689999999999999999988754443 23456554 899999999998
Q ss_pred CCCcceeeeecccccCCCCCC--c-cccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHH
Q 001579 802 GGPGMGPIGVKKHLAPFLPSH--P-VVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILN 878 (1050)
Q Consensus 802 GGPg~G~i~v~~~l~~~lpg~--~-vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~ 878 (1050)
.||+.|.|..++-..+.=|+. . ...-.+.+. ....+...+.|.++. +++.|.+ ++.-....+++..++.+.|
T Consensus 255 RGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kIN---faVFP~lQGGPHNht-IaalAvA-LkQa~tpefk~Yq~qV~~N 329 (477)
T KOG2467|consen 255 RGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKIN---FAVFPGLQGGPHNHT-IAALAVA-LKQAMTPEFKEYQKQVLKN 329 (477)
T ss_pred cCCcceeEEEeccCCcCCCCCCCcceechhhhhh---hhccccccCCCCcch-HHHHHHH-HHhhCCHHHHHHHHHHHHH
Confidence 689999999987655443321 1 100000000 001112222233222 2222333 3333344588888999999
Q ss_pred HHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC------CCCCCCEEEEEcCC
Q 001579 879 ANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM------SWPVPGTLMIEPTE 951 (1050)
Q Consensus 879 a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~------~~pv~~~lrI~~te 951 (1050)
++.|+++|.+. |+++.. |...|-+++|+++ .|++...+-+-|..-+|.+..- +.=.++.+||..+.
T Consensus 330 akala~~l~~~Gy~lvtg---GTDnHlvLvDLr~----~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPA 402 (477)
T KOG2467|consen 330 AKALASALISRGYKLVTG---GTDNHLVLVDLRP----KGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPA 402 (477)
T ss_pred HHHHHHHHHHcCceEecC---CccceEEEEeccc----cCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchh
Confidence 99999999886 888653 4567889999986 4677776666666666665321 11136889987665
Q ss_pred CCC----HHHHHHHHHHHHHHHHHHHHHh
Q 001579 952 SES----KEELDRYCDALISIREEIAQIE 976 (1050)
Q Consensus 952 ~~t----~eeid~fv~aL~~i~~ei~~~~ 976 (1050)
.+| ++|.++..+-|.+.++-..++.
T Consensus 403 mTsRG~~e~df~~v~~fi~~av~i~~~~~ 431 (477)
T KOG2467|consen 403 MTSRGFGEEDFEKVADFIDRAVKIALEIQ 431 (477)
T ss_pred hcccCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 544 5677777766666665554443
No 362
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.56 E-value=5.5e-13 Score=156.41 Aligned_cols=295 Identities=17% Similarity=0.136 Sum_probs=188.9
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc----
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 288 (1050)
..+|++.+|++.|.+. +..+.+||+|+.++++++ .. +||+||++...+..+...+......+|+++++++.
T Consensus 63 v~~lE~~la~leg~~~--av~~~SG~aAi~~al~al-l~--~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~ 137 (432)
T PRK06702 63 LAAFEQKLAELEGGVG--AVATASGQAAIMLAVLNI-CS--SGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTA 137 (432)
T ss_pred HHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHHHh-cC--CCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCH
Confidence 3457789999999876 678999999999888765 23 89999999999998888876655678999999875
Q ss_pred hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCC
Q 001579 289 KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1050)
Q Consensus 289 ~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~ 365 (1050)
+++++ ++++|++|++.+| |..|.+.|+++|+++||++|++++++ +.++.+.+..|-++||||++.|. |.++++
T Consensus 138 ~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD-~T~~tP~~~~pl~~GADIvv~S~TKy~~Gh--- 213 (432)
T PRK06702 138 DEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVD-NTLATPYLCQAFEHGANIIVHSTTKYIDGH--- 213 (432)
T ss_pred HHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEE-CCCCchhhCChhhcCCCEEEEccccccCCC---
Confidence 46666 8899999999887 78999999999999999999999994 45566667778899999999998 888753
Q ss_pred CCcceEEEEEehhhhhcCC--CcEEeEeecCCCCcceEEecc---------cc-cccccccccCCCccchhHHHHHHHHH
Q 001579 366 GGPHAAFLATSQEYKRMMP--GRIVGVSIDSSGKPALRVAMQ---------TR-EQHIRRDKATSNICTAQALLANMAAM 433 (1050)
Q Consensus 366 GGP~~G~la~~~~~~r~lp--grivG~s~d~~g~~~~~l~lq---------tr-eq~irRekaTsnict~~~l~a~~aa~ 433 (1050)
++--+|.+..+..+.-... ..++ ..| ... +.+.+. .+ ..+.+|.-| .| .+++ ..
T Consensus 214 sd~l~G~v~~~~~~~w~~~~~~~l~--~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~-~sp~-----~a 279 (432)
T PRK06702 214 ASSLGGIVIDGGNFDWTNGKYPELV--EPD--PSY-HGVSYVQNFGAAAYIVKARVQLLRDYG---NC-MSPF-----NA 279 (432)
T ss_pred cceeceEEEeCCCcccccccccccc--ccc--ccc-cccchhhccchhhHHHHHHHHHHHHcc---CC-CCHH-----HH
Confidence 1112344432221110000 0000 000 000 000000 00 011122212 11 1222 12
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CC-----C------------CccEEEEecCC----HHHHHHH
Q 001579 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL-----P------------FFDTVKVKCAD----AHAIASA 491 (1050)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~-~~-----~------------~~~~v~i~~~~----~~~i~~~ 491 (1050)
|+...|-+-+..+.+|..+++..+++.|++.+.++-+ .+ + +...|+|.+++ +..+.+.
T Consensus 280 ~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~ 359 (432)
T PRK06702 280 YISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIAN 359 (432)
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHh
Confidence 3456666677788888899999999999988645422 11 1 11247777653 3445555
Q ss_pred HHHc--Cceee---------------e----------ecCCeEEEEeccCCCHHHHHHHHHHHhCC
Q 001579 492 AYKI--EMNLR---------------V----------VDSNTVTASFDETTTLEDVDKLFIVFAGG 530 (1050)
Q Consensus 492 L~~~--GI~~~---------------~----------~~~~~lris~~e~~t~edId~lv~~l~~~ 530 (1050)
|.=. +..+. . +.++.||+|+..-+.++=|+.|.++|...
T Consensus 360 l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liRlSvGlEd~eDLi~Dl~~Al~~~ 425 (432)
T PRK06702 360 VKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGIEDVSDIIADLEAALVGG 425 (432)
T ss_pred CccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Confidence 4321 22210 0 12467999999776555567777777644
No 363
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.56 E-value=2.5e-13 Score=157.91 Aligned_cols=217 Identities=16% Similarity=0.095 Sum_probs=148.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..+|++.++++.|.+.+ +...+|.+|..+.++++. . ++|+||+++..|+..... ....|++++.++.
T Consensus 63 ~~~Le~~iA~le~~~~~-~~~~sG~~Ai~~~l~all----~----~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~ 133 (394)
T PRK09028 63 HFAFQAAIVELEGGAGT-ALYPSGAAAISNALLSFL----K----AGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDP 133 (394)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh----C----CCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECC
Confidence 34688899999887654 445667777655554431 2 458899988766544332 3457888887764
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+ |.++++++++ ++|++|++++| |.+|.+. |+++|+++||++|++++||.++.. ....+|.++|+|+++
T Consensus 134 ~-----~~e~l~~~l~---~~TklV~lespsNPtg~v~-dl~~I~~la~~~g~~lvvD~t~a~--p~~~~Pl~~GaDivv 202 (394)
T PRK09028 134 M-----IGEGIRELIR---PNTKVLFLESPGSITMEVQ-DVPTLSRIAHEHDIVVMLDNTWAS--PINSRPFEMGVDISI 202 (394)
T ss_pred C-----CHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCccc--cccCCccccCceEEE
Confidence 2 5688998886 78999999999 5688887 899999999999999999988643 234789999999999
Q ss_pred eCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhH
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1050)
.++|||++.+ |.--+|.++.++++.+.+-. . ....+...+ |+ -+|+...|-+-|
T Consensus 203 ~S~tK~l~Gh---~d~~~G~~~~~~~~~~~l~~----~---------~~~~G~~~~-p~---------~a~l~~rgl~TL 256 (394)
T PRK09028 203 QAATKYIVGH---SDVMLGTATANEKHWDQLRE----H---------SYLMGQCTS-PD---------DVYLAMRGLRTL 256 (394)
T ss_pred EeCCeEecCC---CCEEEEEEECCHHHHHHHHH----H---------HHhcCCCCC-HH---------HHHHHHcccCcH
Confidence 9999999521 11225666555543322210 0 001122221 11 234556666677
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 869 TEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 869 ~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
.-+.++..+||..+++.|+++ ..|.|+|
T Consensus 257 ~lR~~~~~~na~~la~~L~~~p~v~~V~yPg 287 (394)
T PRK09028 257 GVRLAQHEKNALKVANWLATRPEVDHVRHPA 287 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccEEECCC
Confidence 777888899999999999986 3466765
No 364
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.56 E-value=4.5e-13 Score=155.26 Aligned_cols=228 Identities=17% Similarity=0.164 Sum_probs=156.4
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch---
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 289 (1050)
..++++.+|++.|.+. +.++.+|++++.++. +. .. +||+||+++..++.+...+...++.+|++++.+|..
T Consensus 54 ~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~l-l~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~ 127 (366)
T PRK08247 54 RGVLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SL-FR--SGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLK 127 (366)
T ss_pred HHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HH-hC--CCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHH
Confidence 4567789999999987 567889988777643 32 22 789999999999998887776667789999998764
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++++ +..+.++...|.++|+||+++|. |.++++ |
T Consensus 128 ~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD-~t~~~~~~~~p~~~g~di~i~S~sK~~~g~---~ 203 (366)
T PRK08247 128 AIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVD-NTFYTPVLQRPLEEGADIVIHSATKYLGGH---N 203 (366)
T ss_pred HHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE-CCCccccccCchhcCCcEEEeecceeccCC---C
Confidence 4555 7788999999998 67899999999999999999999994 45555656667778999999998 877632 2
Q ss_pred CcceEEEEEe-hhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001579 367 GPHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1050)
Q Consensus 367 GP~~G~la~~-~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1050)
+--+|++.++ +++.+++. ..|.. ...|. +++ . .|+...+-+-+..
T Consensus 204 d~~~G~iv~~~~~l~~~~~-------------------------~~~~~---~g~~~-s~~---~--a~l~~~~l~tl~~ 249 (366)
T PRK08247 204 DVLAGLVVAKGQELCERLA-------------------------YYQNA---AGAVL-SPF---D--SWLLIRGMKTLAL 249 (366)
T ss_pred ceeeeEEecChHHHHHHHH-------------------------HHHHh---cCCCC-ChH---H--HHHHHhccCcHHH
Confidence 2235677765 34433320 00000 11111 111 1 1223334445566
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEc-CCCCccEEEEecCC
Q 001579 446 IAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCAD 484 (1050)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~l~-~~~~~~~v~i~~~~ 484 (1050)
..++..+++..+++.|++..++..+ .++.-..++|.+++
T Consensus 250 r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~~ 289 (366)
T PRK08247 250 RMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQD 289 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEECC
Confidence 6677789999999999998547643 22223345555544
No 365
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.56 E-value=7.7e-13 Score=153.72 Aligned_cols=305 Identities=15% Similarity=0.079 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~ 712 (1050)
...++++++++.+|.+.+ +.+++|++|...++ ++. +..++++||++...|......+...|++++.++++++
T Consensus 32 ~~~~~e~~la~~~g~~~~-v~~~sgt~aL~~~l---~al----~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~ 103 (376)
T TIGR02379 32 FSRRCETWLENRTGTKKA-LLTPSCTAALEMAA---LLL----DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD 103 (376)
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHH---HHc----CCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCC
Confidence 355788999999998875 45567776543332 221 2235689999987665554456778999999999877
Q ss_pred -CCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEecccccccc-ccCCCCcccCcEEEeC
Q 001579 713 -GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSPGYIGADVCHLN 790 (1050)
Q Consensus 713 -g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~-gl~~pg~~GaDv~~~~ 790 (1050)
+.+|+++|+++++ ++|++|++++| +|... ++++|.++|+++|++++.|+++..+.. .-...|.+ .|+.+++
T Consensus 104 ~~~~d~~~le~~i~---~~tk~Iip~~~--~G~~~-d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~-~~~~~fS 176 (376)
T TIGR02379 104 TMNIDETLIESAIT---HRTKAIVPVHY--AGVAC-DMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSI-GHLGTFS 176 (376)
T ss_pred cCCCCHHHHHHhcC---cCceEEEEeCC--CCCcc-CHHHHHHHHHHCCCEEEEECccccCCccCCcccCCC-CCEEEEe
Confidence 6899999999997 78999988776 47776 799999999999999999998753221 11122333 3888888
Q ss_pred CccccccCCCCCCCcceeeeec-ccccCCCCC-CccccCCCC-CC---CCC--CCCCCCCCcchhhhHHHHHHHHHHHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPS-HPVVSTGGI-PA---PEK--SQPLGTIAAAPWGSALILPISYTYIAM 862 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg-~~vg~~~~~-~~---~~~--~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1050)
+|++= .+..||. +|.++++ +++...+.- +..|..... .. ... .....+... +...++...+-+..
T Consensus 177 f~~~K--~l~~g~~-gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~----~~~~Aa~g~~qL~~ 249 (376)
T TIGR02379 177 FHETK--NYTSGGE-GGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLP----SELQAAYLWAQLEQ 249 (376)
T ss_pred CCCCC--cCcccCC-ceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCc----cHHHHHHHHHHHHH
Confidence 87742 2333334 4666665 444443320 000110000 00 000 000001110 11222223333333
Q ss_pred HChhhHHHHHHHHHHHHHHHHHHHhccC--C-eeecC-CC--CccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC
Q 001579 863 MGSKGLTEASKIAILNANYMAKRLEKHY--P-ILFRG-VN--GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT 936 (1050)
Q Consensus 863 lG~eGl~~~a~~~~~~a~yl~~~L~~~~--~-v~~~g-~~--g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~ 936 (1050)
+.+..++..+++++..++|+++. . +..+. +. ....|-+.+.++. +.+.+++.+.|.++||....
T Consensus 250 -----l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~r~~l~~~L~~~gI~~~~ 319 (376)
T TIGR02379 250 -----ADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKD-----EDDRNELIKYLKEQEIMAVF 319 (376)
T ss_pred -----hHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECC-----cCCHHHHHHHHHHCCCCccc
Confidence 44455555667777788887642 1 11111 11 1223445555431 24678999999999997531
Q ss_pred CC------------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 937 MS------------------WPV-----PGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 937 ~~------------------~pv-----~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
.. +|. ...|.+-.....|++|+|+.+++|+++.
T Consensus 320 ~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 320 HYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred cCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 11 110 2346666666789999999999998763
No 366
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.56 E-value=4.5e-13 Score=158.42 Aligned_cols=326 Identities=14% Similarity=0.178 Sum_probs=193.6
Q ss_pred cccccccccCcc--hhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhh---CCCeeeeccCchHHHHHHHH
Q 001579 591 MIPLGSCTMKLN--ATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT---GFDSFSLQPNAGAAGEYAGL 665 (1050)
Q Consensus 591 ~i~lGs~t~~~~--~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~---G~d~~~l~~~sGa~ge~a~L 665 (1050)
...+|++..++. .++..+.. ...+...+.... ..+...++.+.|++++ +++.+ ++.+||++++++++
T Consensus 49 ~~~lGh~~p~v~~~~ai~~q~~-~~~~~~~~~~~~------~~~~~~~l~~~l~~~~~~~~~~~v-~f~~sGsEAve~Al 120 (431)
T TIGR03251 49 SMALGMNHPALVDDLAFRARLG-AAAVNKPSNSDV------YTVAMARFVDTFARVLGDPALPHL-FFIEGGALAVENAL 120 (431)
T ss_pred hcCCCCCChhhhHHHHHHHHHH-HhhhcccccCCC------CCHHHHHHHHHHHHhcCCCCcCEE-EEeCCcHHHHHHHH
Confidence 346899988887 55444421 111100010000 0123446667777776 23443 67899999999999
Q ss_pred HHHHHHHH----hcCCCC--CCEEE-EcCCCCCccHHHHHhCCCE-E----------EEE--c-----CCCCC-------
Q 001579 666 MVIRAYHK----ARGDHH--RNVCI-IPVSAHGTNPATAAMCGMK-I----------VSV--G-----TDAKG------- 713 (1050)
Q Consensus 666 lair~y~~----~~G~~~--r~~Vl-ip~saHgt~pa~a~~~G~~-v----------v~V--~-----~d~~g------- 713 (1050)
+.+|.|.. .+|..+ |++|| ...++||....+....|-+ . ..+ | ++.+.
T Consensus 121 klAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 200 (431)
T TIGR03251 121 KTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIAL 200 (431)
T ss_pred HHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHH
Confidence 99998842 234321 44555 5778999876664433311 0 011 1 11100
Q ss_pred -CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCc-------
Q 001579 714 -NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------- 781 (1050)
Q Consensus 714 -~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~------- 781 (1050)
.-+++++++.++++.+++++|+++.. +..|++. ..+++|+++|++||+++++|++ +.|+.+.|.
T Consensus 201 ~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV----~tG~GrtG~~~a~~~~ 276 (431)
T TIGR03251 201 EEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEV----QTGVGLTGTAWAYQQL 276 (431)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc----hhccCccchHHHHHhc
Confidence 12456677788777789999999864 4567663 3699999999999999999987 456666653
Q ss_pred -ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHH
Q 001579 782 -IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1050)
Q Consensus 782 -~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1050)
..+|++++ .|.+ |..|.+..+ ++..... ..... .+...+++.|++..++++.+.|
T Consensus 277 gv~PDi~~~--gK~~--------~~~g~~~~~-~i~~~~~-~~~~~------------~~~~~~T~~gnpl~~aaa~a~L 332 (431)
T TIGR03251 277 GVQPDIVAF--GKKT--------QVCGIMAGR-RVDEVAD-NVFAV------------PSRLNSTWGGNLVDMVRATRIL 332 (431)
T ss_pred CCCCCEEEe--cccC--------ccceEEecc-hHHHhhh-hcccC------------ccccCCCCCCCHHHHHHHHHHH
Confidence 24788876 4754 334555433 2211110 00000 0011122346677778888888
Q ss_pred HHHChhhHHHHHHHHHHHHHHHHHHHhcc---CC-eee--cCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCccc
Q 001579 861 AMMGSKGLTEASKIAILNANYMAKRLEKH---YP-ILF--RGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG 934 (1050)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~-v~~--~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~ 934 (1050)
..+..+++.+. .....+++.++|+++ ++ +.. .|. |.. +.+.+.+ ......+.++|.++|+.+
T Consensus 333 ~~l~~~~l~~~---~~~~g~~l~~~L~~l~~~~~~~i~~vrg~-G~~---~~i~~~~-----~~~~~~~~~~l~~~Gvl~ 400 (431)
T TIGR03251 333 EIIEEERLVDN---ARVQGAHLLARLHELAAEFPHLVSNPRGR-GLM---CAFDLPS-----TADRDEVIRQLYREGVLL 400 (431)
T ss_pred HHHHhcCHHHH---HHHHHHHHHHHHHHHHHhCccceeccccc-cee---EEEEeCC-----HHHHHHHHHHHHhCCeEE
Confidence 88877765433 335667777777653 33 321 121 221 2233321 112457899999999987
Q ss_pred CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001579 935 PTMSWPVPGTLMIEPTESESKEELDRYCDALIS 967 (1050)
Q Consensus 935 ~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~ 967 (1050)
.... .+.+|++|+..+|++|||+++++|.+
T Consensus 401 ~~~g---~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 401 LGCG---ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred ecCC---CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 4222 26799999999999999999999875
No 367
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.56 E-value=1.3e-13 Score=159.67 Aligned_cols=312 Identities=17% Similarity=0.208 Sum_probs=183.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhcCCC-ccc--cccCCCCCCCCCcHHHHHHHH-h--CCCcccccCCChhHHhhhHHH
Q 001579 138 SMKFSKFDEGLTESQMIEHMQKLASMNK-VYK--SFIGMGYYNTHVPPVILRNIM-E--NPAWYTQYTPYQAEIAQGRLE 211 (1050)
Q Consensus 138 ~~~lp~~~~~~sE~e~~~~~~~la~~n~-~~~--~~lG~g~~~~~~p~~i~~~i~-~--~~~~~t~ytpyq~eisqG~le 211 (1050)
+.++| .++.+.+++++.+++...... .+. .|.|.-+-+ ..|+.+.-.++ . |. ..+..+.+....+
T Consensus 9 ~~~lp--~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~-~~~~~i~~~~l~~~~n~------n~~~~~~~P~~~~ 79 (373)
T PF00282_consen 9 DEELP--EEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGG-PSPASILADLLASALNQ------NGFTWEASPAATE 79 (373)
T ss_dssp HCCHH--SSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT---CHHHHHHHHHHHHHT-------BTTSTTTSHHHHH
T ss_pred ccccc--cCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCC-ccHHHHHHHHHHhhhcc------ccccccccccccc
Confidence 34566 467789999999987654432 222 233222111 13333321222 1 11 1223344555566
Q ss_pred HHHHHHHHHHHhcCCCC-------cceeEecchHHHHHHHHHHhhhh-------cC----CCCEEEEcCCCChhHHHHHH
Q 001579 212 SLLNFQTMIADLTGLPM-------SNASLLDEGTAAAEAMAMCNNIQ-------KG----KKKTFIIASNCHPQTIDICI 273 (1050)
Q Consensus 212 ~l~e~q~~ia~L~G~~~-------anasl~d~~Taa~eA~~la~~~~-------~~----~gd~Vlvs~~~Hps~~~~~~ 273 (1050)
...+.-+++++|+|++. +...++.|||.+.-..+++.|-. ++ ++-.|++++..|.++.+.++
T Consensus 80 ~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~ 159 (373)
T PF00282_consen 80 IEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAAR 159 (373)
T ss_dssp HHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHH
T ss_pred chHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcc
Confidence 77778899999999992 35678889986655444433311 11 23478899999999998865
Q ss_pred HhccCCCeEEEEcCch--------hhhc-cC-----CCe-eEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCcc
Q 001579 274 TRADGFDIKVVVSDLK--------DIDY-KS-----GDV-CGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLA 337 (1050)
Q Consensus 274 ~~a~~~gi~v~~~~~~--------~l~~-l~-----~~t-~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~a 337 (1050)
- +|+.++.++.+ +|++ +. ..+ ..|+.+.+ +.+|.++|+++|+++|++++++++|++..-+
T Consensus 160 ~----lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg 235 (373)
T PF00282_consen 160 I----LGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGG 235 (373)
T ss_dssp H----TTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGG
T ss_pred e----eeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccc
Confidence 4 46667777553 4543 21 223 35667777 5689999999999999999999999663322
Q ss_pred ccCCCC------CCcccceEEEecC-ccccccCCCCCcceEEEEEehhh-hh-cC--CCcEEeEeecCCCCcceEEeccc
Q 001579 338 LTILKP------PGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEY-KR-MM--PGRIVGVSIDSSGKPALRVAMQT 406 (1050)
Q Consensus 338 lg~l~~------pg~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~-~r-~l--pgrivG~s~d~~g~~~~~l~lqt 406 (1050)
..++.+ .+--+||-+..+. |+++.|++ +|++.+|++. ++ .+ ....++-. +.+....+
T Consensus 236 ~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~-----~~~~l~r~~~~l~~~~~~~~~Yl~~~-~~~~~~~~------ 303 (373)
T PF00282_consen 236 SALLSPEYRHLLFGIERADSITIDPHKWLGVPYG-----CGVLLVRDKSDLRDAFSINADYLGND-DRESDESY------ 303 (373)
T ss_dssp GGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS------EEEEESSGGGHHGGGEEEETCTT-S--SSS-GGG------
T ss_pred cccccccccccccccccccccccchhhhhcCCcc-----ceeEEeecccchHHHhccChhhhccc-cccccccc------
Confidence 112211 1224689999999 77777875 5678787742 22 22 11111100 00000000
Q ss_pred ccccccccccCCC-ccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEec
Q 001579 407 REQHIRRDKATSN-ICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC 482 (1050)
Q Consensus 407 req~irRekaTsn-ict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~ 482 (1050)
.-++.. -|| ...-++-.-+.+.++|.+|++++.++..++|++|++.|++.+++++++++.+..|+|+.
T Consensus 304 -------~~~~~tl~~S-R~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 304 -------DYGDYTLQGS-RRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp -------CEEEGSSSSS-GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred -------cccccccccc-ccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 001111 122 23333333344688999999999999999999999999999769999888788888864
No 368
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.56 E-value=3.9e-13 Score=157.62 Aligned_cols=212 Identities=20% Similarity=0.207 Sum_probs=143.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|+++...++ +.. . .++++||++...|+.... .+...|++++.++.
T Consensus 67 ~~~le~~lA~l~g~~~~-i~~~sG~~Al~~~l---~~l-l----~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 67 LALLEQRMASLEGGEAA-VALASGMGAITATL---WTL-L----RPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHHH---HHH-c----CCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 45788999999998764 55667876653333 222 1 256789998877764332 24568999999886
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+ |+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.... ...|..+|+|+++
T Consensus 138 ~-----d~~~l~~~i~---~~tklV~le~p~NPtG~~~-di~~I~~la~~~gi~lIvD~a~a~~~--~~~~l~~g~Di~v 206 (403)
T PRK07503 138 T-----DPAALKAAIS---DKTRMVYFETPANPNMRLV-DIAAVAEIAHGAGAKVVVDNTYCTPY--LQRPLELGADLVV 206 (403)
T ss_pred C-----CHHHHHHhcC---ccCcEEEEeCCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhhCCCEEE
Confidence 3 7999999997 68999999998 5789887 89999999999999999999864322 3456668999999
Q ss_pred eCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhH
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1050)
.+++|+|+.+ |+..+|+++.++++...+... +. + ..++ .+.++ . .+|. ..-|-+-+
T Consensus 207 ~S~tK~l~g~---gd~~gG~v~~~~~l~~~l~~~--~~--------~-~~~g-~~~s~----~---~a~l--~l~~L~tl 262 (403)
T PRK07503 207 HSATKYLGGH---GDITAGLVVGGKALADRIRLE--GL--------K-DMTG-AVMSP----F---DAFL--LMRGLKTL 262 (403)
T ss_pred ccccccccCC---CceeEEEEEcCHHHHHHHHhh--hH--------H-hCcC-CCCCH----H---HHHH--HHcCcchH
Confidence 9999999521 233478888776665443210 00 0 0111 11111 1 1222 22233445
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 001579 869 TEASKIAILNANYMAKRLEKH 889 (1050)
Q Consensus 869 ~~~a~~~~~~a~yl~~~L~~~ 889 (1050)
....++..+++..+++.|+++
T Consensus 263 ~~r~~~~~~na~~~a~~L~~~ 283 (403)
T PRK07503 263 ALRMDRHCASAQAVAEWLARH 283 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 555566778999999999875
No 369
>PLN02656 tyrosine transaminase
Probab=99.56 E-value=9.7e-13 Score=154.83 Aligned_cols=304 Identities=15% Similarity=0.116 Sum_probs=176.3
Q ss_pred ccHHHHHHHHHHHHHHhhCC--CeeeeccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~--d~~~l~~~sG-a~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++.+..|. +...+..++| ++|. .++++.+. . ++|+|++++..|+.+...+.+.|+++
T Consensus 73 ~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al---~~~~~~l~-~----~gd~Vlv~~p~y~~~~~~~~~~g~~~ 144 (409)
T PLN02656 73 VGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAI---DVALSMLA-R----PGANILLPRPGFPIYELCAAFRHLEV 144 (409)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHH---HHHHHHHh-C----CCCeEEEeCCCCCcHHHHHHHcCCEE
Confidence 57666666666666655453 3334444444 4443 23333331 2 45789999988876666678899999
Q ss_pred EEEcCCC-C-CCCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccccC-
Q 001579 705 VSVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLT- 777 (1050)
Q Consensus 705 v~V~~d~-~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al~gl~- 777 (1050)
+.+++++ + +.+|+++|+++++ +++++|++++|+ .+|.+- +++++|+++|+++|+++++|.++.. ...+-.
T Consensus 145 ~~i~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 221 (409)
T PLN02656 145 RYVDLLPEKGWEVDLDAVEALAD---QNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPF 221 (409)
T ss_pred EEEeCCCcCCCCCCHHHHHHHhc---cCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCc
Confidence 9999853 3 5799999999986 678999999995 788773 3699999999999999999998531 111110
Q ss_pred CC-CcccC---cEEEeCCccccccCCCCCCCcceeeeecc--------cccCCCCCCccccCCCCCCCCCCCCCCCCCcc
Q 001579 778 SP-GYIGA---DVCHLNLHKTFCIPHGGGGPGMGPIGVKK--------HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAA 845 (1050)
Q Consensus 778 ~p-g~~Ga---Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~--------~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa 845 (1050)
.| ..++. =|.+.++.|+|++| |.++|++++.+ ++...+-. . . .....++
T Consensus 222 ~~~~~~~~~~~vi~~~SfSK~f~~p----GlRiG~~i~~~~~~~~~~~~~~~~~~~--~----------~-~~~~~~s-- 282 (409)
T PLN02656 222 VPMGVFGSIVPVLTLGSLSKRWIVP----GWRLGWFVTTDPSGSFRDPKIVERIKK--Y----------F-DILGGPA-- 282 (409)
T ss_pred ccHHHhcccCcEEEEcccchhccCc----ceeEEEEEEeCcccccccHHHHHHHHH--H----------H-hhhcCCC--
Confidence 11 11111 14567788988754 78999999842 22222110 0 0 0001111
Q ss_pred hhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCee-ecCCCCccceeEEEecccccccCCC-CHHH-
Q 001579 846 PWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPIL-FRGVNGTVAHEFIVDLRGLKNTAGI-EPED- 922 (1050)
Q Consensus 846 ~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~-~~g~~g~~~~e~i~~~~~~~~~~g~-~~~~- 922 (1050)
...|. ++..++.....+-+++..+...++.+++.+.|+++.... +..+.+..+ +.++++.... .+. +..+
T Consensus 283 ~~~q~----a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~--~w~~l~~~~~-~~~~~~~~~ 355 (409)
T PLN02656 283 TFIQA----AVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMA--VMVKLNLSLL-EDISDDIDF 355 (409)
T ss_pred HHHHH----HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEE--EEEecchhhc-CCCCCHHHH
Confidence 11222 122222211223355555566677788888887741111 111222221 3445431000 011 2334
Q ss_pred HHHHHHHCCccc-CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 923 VAKRLMDYGFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 923 vakrL~d~Gi~~-~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
+.+.|.++|+.+ +...|...+.+||++.. +.+++++-++.|++++.
T Consensus 356 ~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~--~~e~l~eal~rl~~~~~ 402 (409)
T PLN02656 356 CFKLAREESVIILPGTAVGLKNWLRITFAA--DPSSLEEALGRIKSFYL 402 (409)
T ss_pred HHHHHHhCCEEEecchhcCCCCeEEEEeCC--CHHHHHHHHHHHHHHHH
Confidence 456677899975 33345446899999984 56666666666665543
No 370
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.56 E-value=7.3e-13 Score=153.13 Aligned_cols=236 Identities=18% Similarity=0.122 Sum_probs=156.8
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEc-Cchhhh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVS-DLKDID 292 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~-~~~~l~ 292 (1050)
.++++.+|++.|.+ ++.++.+|++|+.+++.. +. +||+||++...+......+.......++++.+. |+++++
T Consensus 57 ~~le~~lA~leg~~--~~v~~~sG~aAi~~~l~~--l~--~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~~d~~~l~ 130 (364)
T PRK07269 57 AKLEETLAAIESAD--YALATSSGMSAIVLAFSV--FP--VGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELI 130 (364)
T ss_pred HHHHHHHHHHhCCC--eEEEeCCHHHHHHHHHHH--hC--CCCEEEEecCCcCchHHHHHHHHhcCcEEEEecCCHHHHH
Confidence 45778999999866 488899999887765532 22 899999999888776655444333346665544 467777
Q ss_pred c-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCCcc
Q 001579 293 Y-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPH 369 (1050)
Q Consensus 293 ~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GGP~ 369 (1050)
+ +.++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|-++|+||++.|. |.++++ |.--
T Consensus 131 ~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD-~t~~~~~~~~pl~~gaDivv~S~tK~l~g~---~d~~ 206 (364)
T PRK07269 131 AAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVD-NTFYSPIYQRPIELGADIVLHSATKYLSGH---NDVL 206 (364)
T ss_pred HhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCcEEEecCceeccCC---Cccc
Confidence 7 8889999999998 67999999999999999999999994 34455555567789999999998 777643 2112
Q ss_pred eEEEEEeh-hhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHH
Q 001579 370 AAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1050)
Q Consensus 370 ~G~la~~~-~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~ 448 (1050)
+|.+++++ ++.+++- ..|...| .| .+++ .| |+...|-+-|..+.+
T Consensus 207 gG~v~~~~~~l~~~~~-------------------------~~~~~~G---~~-~s~~---~a--~l~~~~L~tL~~r~~ 252 (364)
T PRK07269 207 AGVVVTNDLELYEKLF-------------------------YNLNTTG---AV-LSPF---DS--YLLMRGLKTLSLRME 252 (364)
T ss_pred ceEEEeCcHHHHHHHH-------------------------HHHHHhC---CC-CCHH---HH--HHHHcCCCcHHHHHH
Confidence 45666653 3333220 0000111 11 0111 12 234555566777888
Q ss_pred HHHHHHHHHHHHHhcCCCEE-EcCCCCccEEEEecCC---HHHHHHHHH
Q 001579 449 RVHGLAGTFALGLKKLGTVE-VQGLPFFDTVKVKCAD---AHAIASAAY 493 (1050)
Q Consensus 449 ~~~~~a~~l~~~L~~~G~~~-l~~~~~~~~v~i~~~~---~~~i~~~L~ 493 (1050)
+..+++.++++.|++...+. +..++....++|...+ +..+.+.|.
T Consensus 253 ~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~~~~~~~f~~~l~ 301 (364)
T PRK07269 253 RSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVADETRIPHILNSLK 301 (364)
T ss_pred HHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECCHHHHHHHHHhCC
Confidence 88999999999999875453 3333434456666544 334444443
No 371
>PLN02721 threonine aldolase
Probab=99.56 E-value=4e-13 Score=154.32 Aligned_cols=273 Identities=15% Similarity=0.111 Sum_probs=171.3
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc----
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 288 (1050)
..++++.+|+++|.+. +.++.+||.+..+++.+.. ..+||+|++++..|.+...... .++..|++++.++.
T Consensus 42 ~~~l~~~la~~~~~~~--~~~~~~Gs~a~~~~l~~~~--~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~~~ 116 (353)
T PLN02721 42 ALRLEEEMAKIFGKEA--ALFVPSGTMGNLISVLVHC--DVRGSEVILGDNSHIHLYENGG-ISTLGGVHPRTVKNNEDG 116 (353)
T ss_pred HHHHHHHHHHHhCCce--eEEecCccHHHHHHHHHHc--cCCCCeEEEcCccceehhcccc-hhhhcCceeEecCCCcCC
Confidence 3567889999999875 5677778766554444432 1278999999999976654210 13456888877653
Q ss_pred ----hhhhc-cC-------CCeeEEEEEcC--CCCeeEcc---HHHHHHHHHhCCcEEEEEecCccccCC----CCCC--
Q 001579 289 ----KDIDY-KS-------GDVCGVLVQYP--GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTIL----KPPG-- 345 (1050)
Q Consensus 289 ----~~l~~-l~-------~~t~~V~v~~p--n~~G~i~d---i~~I~~~ah~~galliV~a~~~alg~l----~~pg-- 345 (1050)
+++++ ++ +++++|+++++ |..|.+.| +++|+++||++|++++++. ...++.. .++.
T Consensus 117 ~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~-a~~~~~~~~~~~~~~~~ 195 (353)
T PLN02721 117 TMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDG-ARIFNASVALGVPVHRL 195 (353)
T ss_pred CcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEc-hhhhcchhhhCCCHHHH
Confidence 34555 54 57899998764 45788765 7899999999999999943 2222211 1222
Q ss_pred cccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchh
Q 001579 346 ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ 424 (1050)
Q Consensus 346 ~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~ 424 (1050)
..++|.++.+. |+|+. |.+++++.++++...+... ... ..++.+. .
T Consensus 196 ~~~~d~~~~s~sK~l~~------~~G~~~~~~~~~~~~~~~~-----~~~-------------------~~~~~~~---~ 242 (353)
T PLN02721 196 VKAADSVSVCLSKGLGA------PVGSVIVGSKSFIRKAKRL-----RKT-------------------LGGGMRQ---V 242 (353)
T ss_pred hhhCCEEEEecccccCC------ceeeEEecCHHHHHhHHHH-----HHh-------------------cCCCeeh---h
Confidence 24789988887 77754 3334566677665543100 000 0000000 0
Q ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEE-cCCCCccEEEEecC----C-HHHHHHHHHHcCce
Q 001579 425 ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEV-QGLPFFDTVKVKCA----D-AHAIASAAYKIEMN 498 (1050)
Q Consensus 425 ~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l-~~~~~~~~v~i~~~----~-~~~i~~~L~~~GI~ 498 (1050)
+.++ .+++. .+ .+-++++ ++..++++++.+.|++++++++ ...+..+-+.++.+ . ..++.++|.++||.
T Consensus 243 ~~~~-~~~~~-~l--~~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~ 317 (353)
T PLN02721 243 GVLA-AAALV-AL--QENVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGVL 317 (353)
T ss_pred HHHH-HHHHH-HH--HHHHHHH-HHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCcE
Confidence 1111 11110 11 1112222 3346778899999999844765 43322223444443 2 67899999999999
Q ss_pred eeeecCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 499 LRVVDSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 499 ~~~~~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
++....+.+|++++..++++|+++++++|+.
T Consensus 318 v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~ 348 (353)
T PLN02721 318 LMPGNSSRIRVVTHHQISDSDVQYTLSCFQQ 348 (353)
T ss_pred EecCCCceEEEEecCcCCHHHHHHHHHHHHH
Confidence 9887778999999999999999999999963
No 372
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.56 E-value=8.3e-13 Score=159.94 Aligned_cols=308 Identities=14% Similarity=0.105 Sum_probs=175.9
Q ss_pred cccHHHHHHHHHHHHHHhh--CCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 627 AQGYQEMFNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~--G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
.+|..++.+.+.+++.+.. +.+...+..++|++. +..++++++. .++|+|+++...+..+...+.+.|.++
T Consensus 184 ~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~e--al~~~~~~l~-----~~Gd~Vli~~P~y~~y~~~~~~~g~~~ 256 (517)
T PRK13355 184 SKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSE--LINLSMSALL-----DDGDEVLIPSPDYPLWTACVNLAGGTA 256 (517)
T ss_pred CcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHH--HHHHHHHHhC-----CCCCEEEEcCCCCcCHHHHHHHCCCEE
Confidence 3676555555555554332 344444555555542 2333344331 246899999988877777788999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccc--c
Q 001579 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG--L 776 (1050)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al~g--l 776 (1050)
+.++++++ +.+|+++|+++++ +++++|++++|| .+|.+. +.+++|+++|+++|+++++|.++.. ...+ .
T Consensus 257 v~~~~~~~~~~~~d~~~l~~~~~---~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~ 333 (517)
T PRK13355 257 VHYRCDEQSEWYPDIDDIRSKIT---SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEH 333 (517)
T ss_pred EEeecCcccCCCCCHHHHHHhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCc
Confidence 99998764 5799999999996 789999999994 789775 3499999999999999999998531 1111 1
Q ss_pred CCCCcccCcE--E-EeCCccccccCCCCCCCcceeeeec--ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHH
Q 001579 777 TSPGYIGADV--C-HLNLHKTFCIPHGGGGPGMGPIGVK--KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1050)
Q Consensus 777 ~~pg~~GaDv--~-~~~~hKtf~~P~g~GGPg~G~i~v~--~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1050)
.....+..|+ + +.++.|+|++| |+++|++++. +.+...+-... .. ......+.+..++..
T Consensus 334 ~s~~~~~~~~~vi~~~S~SK~~~~~----G~RiG~~i~~~~~~~~~~~~~~l-~~----------~~~~~~~~~~~~q~a 398 (517)
T PRK13355 334 TSIASLAPDLFCVTFSGLSKSHMIA----GYRIGWMILSGNKRIAKDYIEGL-NM----------LANMRLCSNVPAQSI 398 (517)
T ss_pred ccHHHhCCCCeEEEEecchhhccCc----ccceEEEEeeCchhhHHHHHHHH-HH----------HhcCcCCcChHHHHH
Confidence 1112222342 2 35678888654 8999999864 32211100000 00 000001111112221
Q ss_pred HHHHHHHHHHHHC-hhhHHH---HHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHH-HH
Q 001579 852 ILPISYTYIAMMG-SKGLTE---ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KR 926 (1050)
Q Consensus 852 ~~~~a~a~l~~lG-~eGl~~---~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~va-kr 926 (1050)
....+. .+.+.+ ..++..++.+++.+.|+++..+.+..+.+.++ +.++++.-. ....+..+++ +.
T Consensus 399 -------~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~g~fy--~~~~l~~~~-~~~~~~~~~~~~l 468 (517)
T PRK13355 399 -------VQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKPKAAFY--IFPKIDVKK-FNIHDDEQFALDL 468 (517)
T ss_pred -------HHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCeeeE--EEeecCccc-CCCCCHHHHHHHH
Confidence 112222 111111 12334556788888887752222222333332 233543100 0001334555 45
Q ss_pred HHHCCccc-CCCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 927 LMDYGFHG-PTMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 927 L~d~Gi~~-~~~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
|.++|+.+ +...|. ..+++||++. .+.++|+..++.|.+.++.
T Consensus 469 l~~~gV~v~pg~~F~~~~~~~~Ris~~--~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 469 LHDKKVLIVQGTGFNWDKPDHFRVVYL--PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred HHhCCEEEeCcchhCCCCcCEEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 67889985 333453 4578999985 5677888877777776654
No 373
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.56 E-value=4e-13 Score=153.57 Aligned_cols=270 Identities=18% Similarity=0.168 Sum_probs=168.2
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~ 714 (1050)
.++++++++++|.+...+..++|++.....+ .+.+ . ++ +|++++..|..+...++..|++++.++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~--~~~l--~----~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~------ 114 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYLL--PRLL--A----PG-RVLVLAPTYSEYARAWRAAGHEVVELP------ 114 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHH--HHHh--C----CC-eEEEeCCCcHHHHHHHHHcCCEEEEeC------
Confidence 5788999999998754555555554322222 2221 1 23 478777666556666788999998887
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccccccCCCC----cccCcEE
Q 001579 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG----YIGADVC 787 (1050)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg----~~GaDv~ 787 (1050)
|+++|+++++ ++++|++++| |.+|.+. +.+++|+++|+++|+++++|.++....... ... ..+.+++
T Consensus 115 -d~~~l~~~~~----~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~i~ 188 (330)
T TIGR01140 115 -DLDRLPAALE----ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDA-SLAPQAARFPGLVV 188 (330)
T ss_pred -CHHHHHhhcc----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCcc-chhhHhccCCCEEE
Confidence 8899998884 4668888999 4788876 238888899999999999999863211111 111 1245688
Q ss_pred EeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 788 ~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
+.+++|+|+.| |-++|++++++++...+... .....++ ..+ ..++..++. ..+
T Consensus 189 ~~S~SK~~g~~----G~R~G~i~~~~~~~~~l~~~--------------~~~~~~s--~~~----q~~~~~~l~---~~~ 241 (330)
T TIGR01140 189 LRSLTKFFGLA----GLRLGFVVAHPALLARLREA--------------LGPWTVN--GPA----RAAGRAALA---DTA 241 (330)
T ss_pred EEecchhhcCc----hhhhhheeCCHHHHHHHHhc--------------CCCCCch--HHH----HHHHHHHHh---chH
Confidence 89999998643 55689999988766544211 0001111 111 122223332 333
Q ss_pred H-HHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC--CCC
Q 001579 868 L-TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP--VPG 943 (1050)
Q Consensus 868 l-~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~-~~~p--v~~ 943 (1050)
+ ++..++...+.+++.+.|+++-.+...+..+ .+ +++++. +..+++++|.++|+.+.. ..|+ -.+
T Consensus 242 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~f--~~~~~~--------~~~~l~~~l~~~gi~v~pg~~f~~~~~~ 310 (330)
T TIGR01140 242 WQAATRARLAAERARLAALLARLGGLEVVGGTA-LF--LLVRTP--------DAAALHEALARRGILIRDFDNFPGLDPR 310 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceECCCCC-eE--EEEEcC--------CHHHHHHHHHHCCEEEEECCCCCCCCCC
Confidence 3 4455566677888888888752232222212 21 345543 357899999999998643 3454 236
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Q 001579 944 TLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 944 ~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
++||+++. ..++ |+|+++|+
T Consensus 311 ~iRi~~~~--~~~~-~~~~~~l~ 330 (330)
T TIGR01140 311 YLRFALPT--DEEN-DRLEEALA 330 (330)
T ss_pred EEEEEecC--HHHH-HHHHHhhC
Confidence 89998863 3345 99888763
No 374
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.56 E-value=6.3e-13 Score=155.29 Aligned_cols=300 Identities=11% Similarity=0.083 Sum_probs=183.4
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Cee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~--d~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++.+..|. +.. .+..++|++. +..++++.+. .++|+|++++..+..+...++..|+++
T Consensus 68 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~--al~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~~ 140 (388)
T PRK07366 68 HGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE--GTAHLPLAVL-----NPGDFALLLDPGYPSHAGGVYLAGGQI 140 (388)
T ss_pred CCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH--HHHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCEE
Confidence 57767666677777666564 333 4655556542 2223333321 246789999887777777788999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cccC-
Q 001579 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLT- 777 (1050)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~gl~- 777 (1050)
+.++++++ ...|++++++++. +++++|++++| |.+|.+- +.+++|+++|+++|+++++|.++..-. .+-.
T Consensus 141 ~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~ 217 (388)
T PRK07366 141 YPMPLRAENDFLPVFADIPTEVL---AQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVE 217 (388)
T ss_pred EEEECCCccCCCCCHHHHHHhhc---ccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCC
Confidence 99999755 3578999988775 57889999999 5789774 358899999999999999998864211 1111
Q ss_pred CCC--cc--cCc--EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHH
Q 001579 778 SPG--YI--GAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSAL 851 (1050)
Q Consensus 778 ~pg--~~--GaD--v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~ 851 (1050)
.|. .+ ..+ +++.++.|+|++| |.++|+++.++++...+-.. +....+++. ..
T Consensus 218 ~~~~~~~~~~~~~vi~~~SfSK~~g~~----GlRiG~~v~~~~li~~l~~~--------------~~~~~~~~~----~~ 275 (388)
T PRK07366 218 PPSILQADPEKSVSIEFFTLSKSYNMG----GFRIGFAIGNAQLIQALRQV--------------KAVVDFNQY----RG 275 (388)
T ss_pred CCChhhCCCCcccEEEEeecccccCCc----chhheehcCCHHHHHHHHHH--------------HhhcccCCC----HH
Confidence 111 11 112 5567888998655 78999999887766543210 000111110 01
Q ss_pred HHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHH-HHC
Q 001579 852 ILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MDY 930 (1050)
Q Consensus 852 ~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL-~d~ 930 (1050)
+...+.+.+. ...+-+++..+...++.+++.+.|+++ .+.+..+.+..+ +.+++++. .+.+..+++++| .++
T Consensus 276 ~~~~a~~~l~-~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~f--~~~~~~~~---~~~~~~~~~~~l~~~~ 348 (388)
T PRK07366 276 ILNGAIAALT-GPQATVQQTVQIFRQRRDAFINALHQI-GWPVPLPEATMY--VWAKLPEP---WQGNSVEFCTQLVAQT 348 (388)
T ss_pred HHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCeeEE--EEEECCcc---cCCCHHHHHHHHHHhC
Confidence 1111112221 123445566666667788888988875 222211222221 34565420 012467888777 577
Q ss_pred CcccC-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 931 GFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 931 Gi~~~-~~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
|+.+. ...|+ ..+.+||++. .+.+++++.++.|++.
T Consensus 349 gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 349 GVAASPGSGFGKSGEGYVRFALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred CEEEeCchHhCcCCCCeEEEEec--CCHHHHHHHHHHHHHh
Confidence 99753 33343 2478999986 3578888888777654
No 375
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.56 E-value=7.4e-13 Score=154.03 Aligned_cols=307 Identities=14% Similarity=0.066 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK 712 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~ 712 (1050)
...++++++++.+|.+.+ +..++|++|...++.++ +..++++||+|...|......+...|++++.++++++
T Consensus 32 ~~~~~e~~la~~~g~~~~-v~~~sgt~al~~~l~~~-------~~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~ 103 (375)
T PRK11706 32 FTRRCQQWLEQRFGSAKV-LLTPSCTAALEMAALLL-------DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD 103 (375)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHHHHHh-------CCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCC
Confidence 356788889999999865 44567776643322221 1235689999988776665667789999999999877
Q ss_pred -CCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccCC-CCcccCcEEEeC
Q 001579 713 -GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTS-PGYIGADVCHLN 790 (1050)
Q Consensus 713 -g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~-pg~~GaDv~~~~ 790 (1050)
+.+|+++|+++++ +++++|+++++ +|... ++++|.++|+++|++++.|+++..+...-.. .|.+ .|+.+++
T Consensus 104 ~~~~d~~~le~~i~---~~tk~i~~~~~--~G~~~-~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~-~~~~~~S 176 (375)
T PRK11706 104 TMNIDETLIEAAIT---PKTRAIVPVHY--AGVAC-EMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTI-GHIGCFS 176 (375)
T ss_pred cCCcCHHHHHHhcC---CCCeEEEEeCC--CCCcc-CHHHHHHHHHHcCCEEEEECccccccccCCeeeecC-cCEEEEe
Confidence 4899999999997 68999998864 68776 7999999999999999999987533210111 2333 4888888
Q ss_pred Cc--cccccCCCCCCCcceeeeecccccCCCCC-CccccCCCCCCCCC--CCCCCCCCcchhhhHHHHHHHHHHHHHHCh
Q 001579 791 LH--KTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSTGGIPAPEK--SQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1050)
Q Consensus 791 ~h--Ktf~~P~g~GGPg~G~i~v~~~l~~~lpg-~~vg~~~~~~~~~~--~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1050)
+| |.++. |. |++++..++++...+.. +..|........+. ......+..++.-+...++...+-++.
T Consensus 177 f~~~K~l~~--g~---gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~--- 248 (375)
T PRK11706 177 FHETKNYTA--GE---GGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEA--- 248 (375)
T ss_pred CCCCccccc--cC---CeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHH---
Confidence 88 88742 22 23444434444432210 00000000000000 000000011111112222222233322
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccC--C-eeec-CCCC--ccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-
Q 001579 866 KGLTEASKIAILNANYMAKRLEKHY--P-ILFR-GVNG--TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS- 938 (1050)
Q Consensus 866 eGl~~~a~~~~~~a~yl~~~L~~~~--~-v~~~-g~~g--~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~- 938 (1050)
+.+..++..++++++.+.|+++- . +.++ .+.+ ...|-+.+.+. .+.+.+++.+.|.++||.+....
T Consensus 249 --l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~r~~l~~~L~~~gI~~~~~~~ 321 (375)
T PRK11706 249 --ADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR-----DLEDRSALINFLKEAGIMAVFHYI 321 (375)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC-----CcCCHHHHHHHHHHCCCCccccCC
Confidence 45555556677888888887642 1 2211 1111 12333444443 13467899999999999753111
Q ss_pred -----------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 939 -----------------WPV-----PGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 939 -----------------~pv-----~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
+|. ...|.+-.....|++|+++.+++|+++.
T Consensus 322 p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 374 (375)
T PRK11706 322 PLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF 374 (375)
T ss_pred ccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence 121 1345555556678999999999998764
No 376
>PRK04311 selenocysteine synthase; Provisional
Probab=99.56 E-value=5.8e-13 Score=157.61 Aligned_cols=294 Identities=21% Similarity=0.248 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC----c--cHHHHHhCCCEEEE
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG----T--NPATAAMCGMKIVS 706 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHg----t--~pa~a~~~G~~vv~ 706 (1050)
...++++.+++++|.+.+ +.+++|+.|...+ +... .++++||+++..|. + .|..+...|+++++
T Consensus 128 r~~~~e~~lA~l~Gae~a-~vv~sgtaAl~l~---l~~l------~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~ 197 (464)
T PRK04311 128 RDRALAALLCALTGAEDA-LVVNNNAAAVLLA---LNAL------AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVE 197 (464)
T ss_pred HHHHHHHHHHHHhCCCeE-EEECCHHHHHHHH---HHHh------CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEE
Confidence 356899999999999865 4567777655332 3221 24578998875332 2 23345678999999
Q ss_pred EcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCC---cccc-ccCHHHHHHHHHHcCCEEEEeccccc-----ccc--c
Q 001579 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST---HGVY-EEGIDEICKIIHDNGGQVYMDGANMN-----AQV--G 775 (1050)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~---~Gv~-~~di~eI~~la~~~G~~v~vD~A~~~-----al~--g 775 (1050)
|+.+ +..++++++++|+ ++|++|++.+++. .|.. ..|+++|+++||++|+++++|++... .++ .
T Consensus 198 v~~~--~~t~~~dle~aI~---~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~ 272 (464)
T PRK04311 198 VGTT--NRTHLRDYEQAIN---ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPD 272 (464)
T ss_pred ECCC--CCCCHHHHHHhcC---ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCC
Confidence 8763 4578999999997 7899999998853 4532 13799999999999999999974210 010 0
Q ss_pred ---cCCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 776 ---LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 776 ---l~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
+..|.++|+|++++++||+| |||..|++++++++.+.+..+..+... + .....- +++
T Consensus 273 ~p~~~~~l~~GaDiv~fSg~K~L------gGp~~G~i~g~~~li~~l~~~~~~r~l------r---~dk~~l----~~l- 332 (464)
T PRK04311 273 EPTVQELLAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIARLKKHPLKRAL------R---VDKLTL----AAL- 332 (464)
T ss_pred CCchhhHHhcCCcEEEecCcccc------cCCceEEEEEcHHHHHHHhhchhHHHH------h---cchHHH----HHH-
Confidence 11234589999999999998 578889999998887766533222110 0 000000 000
Q ss_pred HHHHHHHHH----HHChhh---HHHHHHHHHHHHHHHHHHHhccC------Ceeec----C--C-CCccceeEEEecccc
Q 001579 853 LPISYTYIA----MMGSKG---LTEASKIAILNANYMAKRLEKHY------PILFR----G--V-NGTVAHEFIVDLRGL 912 (1050)
Q Consensus 853 ~~~a~a~l~----~lG~eG---l~~~a~~~~~~a~yl~~~L~~~~------~v~~~----g--~-~g~~~~e~i~~~~~~ 912 (1050)
-...-.|+. ..+-.+ +....++..++|..+++.|+++. .+... | . .+.....+.+.+.+
T Consensus 333 ~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~- 411 (464)
T PRK04311 333 EATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTP- 411 (464)
T ss_pred HHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeC-
Confidence 000111111 111112 11122455567888888887642 22211 1 0 01112334455442
Q ss_pred cccCCCCHHHHHHHHHHCC--cccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 913 KNTAGIEPEDVAKRLMDYG--FHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 913 ~~~~g~~~~~vakrL~d~G--i~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
.+.+..++.++|++.. |... .. .+.+.+-+-- ...+|++.+++.|.+++.
T Consensus 412 ---~~~~~~~l~~~lr~~~~~i~~r-~~---~~~~~ld~r~-~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 412 ---KDRSLEALAARLRLLPPPVIGR-IE---DGRLLLDLRT-LEEEDEERLAAALLEALN 463 (464)
T ss_pred ---CCCCHHHHHHHHhcCCCCEEEE-EE---CCEEEEEeCc-CCHHHHHHHHHHHHHHhh
Confidence 2467899999999643 3332 11 4666666543 457899999999988753
No 377
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.56 E-value=5.1e-13 Score=157.58 Aligned_cols=143 Identities=18% Similarity=0.178 Sum_probs=111.5
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCc-cHH---HHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPA---TAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt-~pa---~a~~~G~~vv~V~~ 709 (1050)
..+|++.++++.|.+.+ +..++|+.+..+++.++. . ++++||++...|+. +.. .+...|++++.++.
T Consensus 66 ~~~Le~~lA~leg~~~a-l~~~sG~~Ai~~al~~ll----~----~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 66 TDVFEKRIAALEGGIGA-LAVSSGQAAITYSILNIA----S----AGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh----C----CCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 44688999999997654 567788776654444331 2 45789998877653 322 25568999999986
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++.. .....|.++|+|+++
T Consensus 137 -----~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~-di~~I~~la~~~gi~vIvD~t~a~--~~~~~pl~~gaDivv 205 (431)
T PRK08248 137 -----SDPENFEAAIT---DKTKALFAETIGNPKGDVL-DIEAVAAIAHEHGIPLIVDNTFAS--PYLLRPIEHGADIVV 205 (431)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEeCCCCc--cccCChhHcCCCEEE
Confidence 48999999997 78999999998 5789998 899999999999999999988542 224566789999999
Q ss_pred eCCccccc
Q 001579 789 LNLHKTFC 796 (1050)
Q Consensus 789 ~~~hKtf~ 796 (1050)
.++||+++
T Consensus 206 ~S~tK~lg 213 (431)
T PRK08248 206 HSATKFIG 213 (431)
T ss_pred EcCccccC
Confidence 99999985
No 378
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.56 E-value=2.5e-12 Score=151.82 Aligned_cols=325 Identities=18% Similarity=0.185 Sum_probs=196.7
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCC---CeeeeccCchHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGF---DSFSLQPNAGAAGEYAGLMVI 668 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~---d~~~l~~~sGa~ge~a~Llai 668 (1050)
..+|++..++..++..+... ..+..+ ++.+ .+...++.+.|++++.. +. .++.++|+++++++++..
T Consensus 45 ~~lGh~~p~v~~a~~~ql~~-~~~~~~-~~~~-------~~~~~~la~~l~~~~p~~~~~~-v~f~~sGseA~e~AlklA 114 (420)
T TIGR00700 45 LNIGHSHPRVVDAVRTQVAE-FTHTCF-MVTP-------YEGYVALAEKLNRIAPGSGPKK-SVFFNSGAEAVENAVKIA 114 (420)
T ss_pred ccCCCCCHHHHHHHHHHHHh-ccCccc-cccC-------ChHHHHHHHHHHHhCCCCCCCE-EEEeCCcHHHHHHHHHHH
Confidence 46788887777666655321 111111 1011 12244778888888742 33 466789999999999988
Q ss_pred HHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCC--------C-----EEEEEcCCCCC-----------CCCHHHHHHHH
Q 001579 669 RAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG--------M-----KIVSVGTDAKG-----------NINIEELRKAA 724 (1050)
Q Consensus 669 r~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G--------~-----~vv~V~~d~~g-----------~iD~e~L~~~i 724 (1050)
|.| .| ++.+|....++||....+..+.| + .+..++..... +-+++.+++.+
T Consensus 115 r~~---tg--r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (420)
T TIGR00700 115 RSY---TG--RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIF 189 (420)
T ss_pred HHh---cC--CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHH
Confidence 876 22 23334467899998876644322 1 23334432100 01356777776
Q ss_pred H--cCCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCc--------ccCcEEEeC
Q 001579 725 E--ANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY--------IGADVCHLN 790 (1050)
Q Consensus 725 ~--~~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~--------~GaDv~~~~ 790 (1050)
. .+.+++++|+++.- ...|++.+ .+++|.++|++||+++++|.++ .|+.+.|. .-+|++++
T Consensus 190 ~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~----tg~gr~g~~~a~~~~~~~pDi~~l- 264 (420)
T TIGR00700 190 VIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQ----TGFARTGAMFACEHEGPEPDLITT- 264 (420)
T ss_pred HhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecc----cCCcccchhHHHhhcCCCCCEEEe-
Confidence 3 34578999988753 34566541 3999999999999999999873 44544442 23788775
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ ||..+|++++++++.+.+.... ..+. +.|+++.++++.+.+..+..+++.+
T Consensus 265 -sK~l~-----~G~pig~v~~~~~i~~~~~~~~--------------~~~T----~~~~pl~~aaa~a~l~~l~~~~~~~ 320 (420)
T TIGR00700 265 -AKSLA-----DGLPLSGVTGRAEIMDAPAPGG--------------LGGT----YAGNPLACAAALAVLAIIESEGLIE 320 (420)
T ss_pred -ecccc-----CCcceEEEEecHHHHhhcCCCC--------------cCCC----CCcCHHHHHHHHHHHHHHHhccHHH
Confidence 58874 5677999999988766542110 0011 2345566666777787776666554
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccccc-c-cCCCCHHHHHHHHHHCCcccCC-CCCCCC
Q 001579 871 ASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK-N-TAGIEPEDVAKRLMDYGFHGPT-MSWPVP 942 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~-~-~~g~~~~~vakrL~d~Gi~~~~-~~~pv~ 942 (1050)
.. ....+++.++|+++ ++.+ ..|. |.. +.+.+.+-. . ........+.++|.++|+.+.. ..| .
T Consensus 321 ~~---~~~g~~l~~~L~~l~~~~~~~~~vrg~-G~~---~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f--~ 391 (420)
T TIGR00700 321 RA---RQIGRLVTDRLTTLKAVDPRIGDVRGL-GAM---IAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF--G 391 (420)
T ss_pred HH---HHHHHHHHHHHHHHHhhCCCEEEeecc-ceE---EEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC--C
Confidence 43 34556677777664 2221 2232 322 233331100 0 0001134667777899998643 223 4
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 943 GTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 943 ~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
+.+|++|....++++|++.++.|.+++
T Consensus 392 ~~lRl~p~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 392 NIIRFLPPLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence 789999988889999999999998876
No 379
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.55 E-value=6.2e-13 Score=154.60 Aligned_cols=212 Identities=17% Similarity=0.196 Sum_probs=148.7
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---h
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~ 289 (1050)
..++++.+|++.|.+. +.++.+|++++.+++ +. . ++||+|++++..|+++...+...++.+|++++.++. +
T Consensus 52 ~~~Le~~lA~l~g~~~--~~~~~sG~aai~~~~-~~-l--~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~ 125 (377)
T PRK07671 52 RAALEELIAVLEGGHA--GFAFGSGMAAITAVM-ML-F--SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLE 125 (377)
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCHHHHHHHHH-HH-h--CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHH
Confidence 4567789999999876 567888887766543 22 2 279999999999998887776656678999999875 4
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCC
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYG 366 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~G 366 (1050)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +..+.+....|.++|+||+++|. |.|++|.+
T Consensus 126 ~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD-~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~-- 202 (377)
T PRK07671 126 EVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVD-NTFMTPYWQSPISLGADIVLHSATKYLGGHSD-- 202 (377)
T ss_pred HHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCCCccccCChhhhCCeEEEecCcccccCCcc--
Confidence 5655 7789999999998 77999999999999999999999994 34454445566789999999998 87764421
Q ss_pred CcceEEEEEeh-hhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001579 367 GPHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1050)
Q Consensus 367 GP~~G~la~~~-~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1050)
-.+|++.+++ ++.+++. ..|..-| .. ..+. ..|+...|-+-+..
T Consensus 203 -~~~G~~v~~~~~l~~~~~-------------------------~~~~~~g--~~--~~~~-----~a~l~~~~l~tl~~ 247 (377)
T PRK07671 203 -VVAGLVVVNSPELAEDLH-------------------------FVQNSTG--GI--LGPQ-----DSWLLLRGLKTLGI 247 (377)
T ss_pred -ceeEEEEeCcHHHHHHHH-------------------------HHHHhhc--CC--CCHH-----HHHHHHcCcChHHH
Confidence 1246666643 3433320 0000000 00 0111 11234455555666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEE
Q 001579 446 IAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
..++..+++..|++.|++..++.
T Consensus 248 R~~~~~~na~~la~~L~~~~~v~ 270 (377)
T PRK07671 248 RMEEHETNSRAIAEFLNNHPAVN 270 (377)
T ss_pred HHHHHHHHHHHHHHHHHcCCCee
Confidence 77888899999999999875454
No 380
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.55 E-value=2.3e-13 Score=158.79 Aligned_cols=285 Identities=14% Similarity=0.106 Sum_probs=177.6
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.. +..++|+.+..++++++. . ++++||++...|+..... +...|+++..++.
T Consensus 63 ~~~Le~~lA~l~G~~~a-l~~~sG~~Ai~~~l~al~----~----~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~ 133 (386)
T PRK06767 63 VKLFEERMAVLEGGEEA-LAFGSGMAAISATLIGFL----K----AGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM 133 (386)
T ss_pred hHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh----C----CCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence 45789999999998754 556777765544333321 2 457899988777654433 2335777776654
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++|++|+++. .+.+..|-..|+|+++
T Consensus 134 -----~d~~~l~~~i~---~~tklV~lesp~NptG~v~-dl~~I~~la~~~g~~vivD~a~a--~~~~~~pl~~g~Div~ 202 (386)
T PRK06767 134 -----ETEADIENKIR---PNTKLIFVETPINPTMKLI-DLKQVIRVAKRNGLLVIVDNTFC--SPYLQRPLELGCDAVV 202 (386)
T ss_pred -----CCHHHHHHhhC---cCceEEEEeCCCCCCceec-CHHHHHHHHHHcCCEEEEECCCc--ccccCCchhcCCcEEE
Confidence 48999999996 789999999994 689887 79999999999999999999863 2234456678999999
Q ss_pred eCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhH
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1050)
.+++|+|+.+ |.+-+|++++++++...+-... + ...+...+ ++ .+|..+..+ +-+
T Consensus 203 ~S~sK~l~g~---g~~~gG~v~~~~~~i~~~~~~~-----------~-~~~g~~~~-~~-------~a~l~~~~L--~tl 257 (386)
T PRK06767 203 HSATKYIGGH---GDVVAGVTICKTRALAEKIRPM-----------R-KDIGGIMA-PF-------DAWLLLRGL--KTL 257 (386)
T ss_pred ecCcceecCC---CCceeEEEEeChHHHHHHHHHH-----------H-HHhCCCCC-HH-------HHHHHHcCC--CcH
Confidence 9999998521 2233688888876443221000 0 00111111 11 134333333 334
Q ss_pred HHHHHHHHHHHHHHHHHHhcc--CC-eeecCCC------CccceeEEEecccccccCCCCHHHHHHHHHHCCcccC----
Q 001579 869 TEASKIAILNANYMAKRLEKH--YP-ILFRGVN------GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP---- 935 (1050)
Q Consensus 869 ~~~a~~~~~~a~yl~~~L~~~--~~-v~~~g~~------g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~---- 935 (1050)
....++..+++.++++.|+++ +. +.|++.+ ......+.|+++. ...+...+.++|...++.++
T Consensus 258 ~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~----~~~~~~~f~~~l~~~~~~~s~G~~ 333 (386)
T PRK06767 258 AVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKG----GKEETQAFINDLHFITIAVSLGDT 333 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcC----CHHHHHHHHHhCCccEEecCCCCc
Confidence 555567788999999999986 33 3333100 0011124455431 11245677788776654321
Q ss_pred -C-CCCC-----------------C-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 936 -T-MSWP-----------------V-PGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 936 -~-~~~p-----------------v-~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
+ +..| + ++.+|+++. .|+.|.+++.|.+++..
T Consensus 334 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG----lE~~~dl~~dl~~al~~ 385 (386)
T PRK06767 334 ETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVG----LESWEDIVSDLEQALKK 385 (386)
T ss_pred CccccCCCccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 1 1111 1 357899876 46677788888877653
No 381
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.55 E-value=6.2e-13 Score=155.77 Aligned_cols=217 Identities=18% Similarity=0.219 Sum_probs=143.4
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH----HHHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP----ATAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~p----a~a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.. +..++|+++... +++++. . ++++|+++...++... ..+...|++++.++.
T Consensus 62 ~~~Le~~lA~l~g~~~~-v~~~sG~~Ai~~---~l~all-~----pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 62 RDLLGEALAELEGGAGG-VITATGMGAINL---VLNALL-Q----PGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred HHHHHHHHHHHhCCCce-EEEcCHHHHHHH---HHHHHh-C----CCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 45788999999997643 556677655533 333331 2 4578888766554321 224557888888875
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++|+++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. .....|.++|+|+++
T Consensus 133 -----~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~-dl~~I~~la~~~gi~vIvD~a~a~--~~~~~pl~~gaDivv 201 (405)
T PRK08776 133 -----TDPRSLADALA---QSPKLVLIETPSNPLLRIT-DLRFVIEAAHKVGALTVVDNTFLS--PALQKPLEFGADLVL 201 (405)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCCcc--cccCCcccccCCEEE
Confidence 48999999996 68999999999 5789887 899999999999999999998643 234567789999999
Q ss_pred eCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.++||+|+.| |+--.|.++++ +++.+.+.. . + ...+ .+.+++. +|.. ..|-+-
T Consensus 202 ~S~tK~l~g~---~~~~~G~vv~~~~~l~~~l~~----~--------~-~~~g-~~~s~~~-------a~l~--~~gl~t 255 (405)
T PRK08776 202 HSTTKYINGH---SDVVGGAVVARDAELHQQLVW----W--------A-NALG-LTGSPFD-------AFLT--LRGLRT 255 (405)
T ss_pred ecCceeecCC---CCceEEEEEeCCHHHHHHHHH----H--------H-HhcC-CCCCHHH-------HHHH--HhhhCc
Confidence 9999999522 11125666664 444332210 0 0 0011 1111221 2322 234455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 868 LTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
+....++...|+..+++.|+++ -+|.|++
T Consensus 256 l~~r~~~~~~na~~la~~L~~~p~v~~V~yP~ 287 (405)
T PRK08776 256 LDARLRVHQENADAIAALLDGHAAVNQVYYPG 287 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCC
Confidence 6666777888999999999875 2345554
No 382
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.55 E-value=2.2e-13 Score=159.70 Aligned_cols=279 Identities=14% Similarity=0.130 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--
Q 001579 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-- 288 (1050)
Q Consensus 211 e~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~-- 288 (1050)
..+.|.|+..|+++|.+.+.+ +++|.|++..+|.+|.. ++||+||++++||.|+...+-. .|...+++.+
T Consensus 70 G~i~eAqe~aA~~fgAd~tyF-vvNGTS~ank~vi~a~~---~~GD~VLvdRN~HKSi~~glil----aGa~Pvyl~p~~ 141 (557)
T COG1982 70 GPIKEAQELAARVFGADHTYF-VVNGTSTANKAVINAVL---TPGDKVLVDRNCHKSIHHGLIL----AGATPVYLEPSR 141 (557)
T ss_pred ccHHHHHHHHHHHhCCCceEE-EECCccHHHHHHHHhhc---CCCCEEEecCCccHHHHHHHHH----cCCceEEecCCC
Confidence 367899999999999998755 67888889999998763 2899999999999999988532 2555555532
Q ss_pred ------------hhhhc--c-CCCe-eEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEE-ecCc---cccCCCC-CCcc
Q 001579 289 ------------KDIDY--K-SGDV-CGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMA-TDLL---ALTILKP-PGEL 347 (1050)
Q Consensus 289 ------------~~l~~--l-~~~t-~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~-a~~~---alg~l~~-pg~~ 347 (1050)
+.+++ + .++. +++++|+|+++|++.|+++|.+.+|..++++.++ ++.. -.+.+.. ..+.
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred CccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhc
Confidence 23333 2 3456 8999999999999999999999999999999992 2221 1122222 2347
Q ss_pred cceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHH
Q 001579 348 GADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1050)
Q Consensus 348 GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~ 427 (1050)
|+|+++.|.++...-+ -.+.++++++. +++. .++ -+.+|.+. -|+++.+
T Consensus 222 ~~~~~tqS~HK~l~al----SQaS~iHv~~~--~~~~-------~~r-~nea~~~h-----------------~STSPsY 270 (557)
T COG1982 222 GADFVTQSTHKLLAAL----SQASMIHVKDG--RAVN-------HER-FNEALMMH-----------------QSTSPSY 270 (557)
T ss_pred CceEEEechhhhhhhh----hhhHHHhhCCC--ccCC-------HHH-HHHHHHHH-----------------ccCCchH
Confidence 9999999995543222 24567776653 2221 000 01122221 2346677
Q ss_pred HHHHHHH--HHHhCcccHHH---HHHHHHHHHHHHHHHHhcCCCEEEcCCC-------------------CccE--EEEe
Q 001579 428 ANMAAMY--AVYHGPEGLKT---IAQRVHGLAGTFALGLKKLGTVEVQGLP-------------------FFDT--VKVK 481 (1050)
Q Consensus 428 a~~aa~y--~~~~g~~Gl~~---ia~~~~~~a~~l~~~L~~~G~~~l~~~~-------------------~~~~--v~i~ 481 (1050)
.++|++- ..+.+..|.+- ..++..+..+++++..+++++|.++.+. .+|+ +++.
T Consensus 271 ~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~ 350 (557)
T COG1982 271 PLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTIT 350 (557)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEe
Confidence 7777773 23445555432 3566677778888888887658776432 1354 5666
Q ss_pred cCC----HHHHHHHHHHcCceeeeecCC--eEEEEeccCCCHHHHHHHHHHHh
Q 001579 482 CAD----AHAIASAAYKIEMNLRVVDSN--TVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 482 ~~~----~~~i~~~L~~~GI~~~~~~~~--~lris~~e~~t~edId~lv~~l~ 528 (1050)
+++ +..+.+.|+++||......+. .+.+++.+..+..+++.|++.+.
T Consensus 351 tp~~Gipg~~v~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 351 TPEFGIPGAIVAKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred cCCCCCcHHHHHHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 543 789999999999988776543 45566666678889999998886
No 383
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.55 E-value=2.2e-13 Score=150.27 Aligned_cols=322 Identities=18% Similarity=0.236 Sum_probs=202.8
Q ss_pred ccccccccCcchhhhhccc-cccccccC-CCCCchhhcccHHHHHHHHHHHHHHhhCCC-eeeeccCchHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPV-TWPSFANI-HPFAPADQAQGYQEMFNNLGEWLCTITGFD-SFSLQPNAGAAGEYAGLMVI 668 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~-~~~~f~~~-~P~~p~e~~~G~~~~i~el~~~lael~G~d-~~~l~~~sGa~ge~a~Llai 668 (1050)
..+|+|++++++++..+.. -|--|..| || -+.++.+.|.+++--+ .+.++.|||++|++.+++++
T Consensus 62 vslGHchP~v~~a~~kQl~~l~H~t~~~~~~------------pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~ma 129 (442)
T KOG1404|consen 62 VSLGHCHPDVVAAAVKQLKKLYHTTSGYLNP------------PIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMA 129 (442)
T ss_pred EEcCCCChHHHHHHHHhhhhhEEeeccccCC------------cHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHH
Confidence 3689999999999887741 12122222 22 2557888888877544 34588999999999999999
Q ss_pred HHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCC-----------CC-------CC-----CC--HHHHHHH
Q 001579 669 RAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD-----------AK-------GN-----IN--IEELRKA 723 (1050)
Q Consensus 669 r~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d-----------~~-------g~-----iD--~e~L~~~ 723 (1050)
|.|.. .-+.|-...++||..+.++.+-|+....-+++ ++ |. .| .++|+..
T Consensus 130 r~Yt~-----~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~ 204 (442)
T KOG1404|consen 130 RLYTG-----NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDL 204 (442)
T ss_pred HHhcC-----CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHH
Confidence 98842 22445568899999888765444332222111 11 11 01 2444444
Q ss_pred HHcCCCCEEEEEEEcC--CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCc-cc-------CcEEEeC
Q 001579 724 AEANRDNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY-IG-------ADVCHLN 790 (1050)
Q Consensus 724 i~~~~~~taaV~vt~P--n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~-~G-------aDv~~~~ 790 (1050)
+....+.+.+-++..+ ...|+++. .+++..++|+++|+++|.|.+ +.||.+.|. || +||+++
T Consensus 205 i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEV----qtGfGRtG~~wgfe~h~v~PDIvTm- 279 (442)
T KOG1404|consen 205 ILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEV----QTGFGRTGHMWGFESHGVVPDIVTM- 279 (442)
T ss_pred HHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhh----hhccccccccccccccCCCccHHHH-
Confidence 5433344444444444 46788873 499999999999999999976 788888885 34 477666
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
.|.++ +|-.+|.+.+.++++..+..+.. ..++ +.|++..++++.+.+..+-++.|.+
T Consensus 280 -AKgiG-----nG~Pl~AVvtt~EIa~v~~~~~~--------------~fnT---yggnP~a~avg~aVL~Vikee~LqE 336 (442)
T KOG1404|consen 280 -AKGIG-----NGFPLGAVVTTPEIADVLNQKSS--------------HFNT---YGGNPVACAVGLAVLKVIKEENLQE 336 (442)
T ss_pred -Hhhcc-----CCCcceeeecCHHHHHHHHhccc--------------cccc---cCCCchhHHHHHHHHHHHHHHhHHH
Confidence 58773 34567778888777655432210 0111 2345666777888888888876665
Q ss_pred HHHHHHHHHHHHHHHHhcc---CCeee--cCCCCccc-eeEEEecc--cccccCCCCHHHHHHHHHHCCcccCCCCCCCC
Q 001579 871 ASKIAILNANYMAKRLEKH---YPILF--RGVNGTVA-HEFIVDLR--GLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVP 942 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~---~~v~~--~g~~g~~~-~e~i~~~~--~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~ 942 (1050)
. +.+...||.++|.++ ++++- +|. |... -|+ ++.+ ++. ........+.+.+.+.|+.++.-.. .+
T Consensus 337 ~---aa~vG~yl~~~l~~l~d~h~iIGdVRG~-GLm~GvE~-V~dk~~~~p-p~~~~~~~i~~~cke~Gvlvg~g~i-~G 409 (442)
T KOG1404|consen 337 N---AAEVGSYLLEKLAALKDKHPIIGDVRGR-GLMLGVEL-VSDKSEPKP-PATAEGAVIGEQCKELGVLVGKGGI-HG 409 (442)
T ss_pred H---HHHHHHHHHHHHHHHhhcCCceeecccc-eeEEEEEE-ecccCCCCC-cchHHHHHHHHHHHHhCeeeecccc-cc
Confidence 4 446789999999875 44431 221 2221 133 2222 111 1111234678889999999853321 14
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHH
Q 001579 943 GTLMIEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 943 ~~lrI~~te~~t~eeid~fv~aL 965 (1050)
+.+||.|+...|+||+|..++..
T Consensus 410 ~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 410 NVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred eEEEecCCeeccHHHHHHHHHHH
Confidence 68999999999999997777655
No 384
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.55 E-value=9.7e-13 Score=154.50 Aligned_cols=306 Identities=15% Similarity=0.120 Sum_probs=186.6
Q ss_pred ccHHHHHHHHHHHHHHhhCCCe--eeeccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFDS--FSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d~--~~l~~~sG-a~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++.+..|.+. .++..++| ++|....+ +.. . .+++.|++++..++.++......|.++
T Consensus 70 ~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~---~~~-~----~~gd~vl~~~p~y~~y~~~~~~~~~~~ 141 (402)
T PRK06107 70 NGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLAL---MAT-L----EAGDEVIIPAPYWVSYPDMVLANDGTP 141 (402)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH---HHh-c----CCCCEEEEecCCCcCHHHHHHHcCCEE
Confidence 5777888888888888888742 34445555 44443332 222 1 246789999887777777778888898
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHc-CCEEEEeccccc-cccccC
Q 001579 705 VSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDN-GGQVYMDGANMN-AQVGLT 777 (1050)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~-G~~v~vD~A~~~-al~gl~ 777 (1050)
+.++++++ +.+|+++|+++++ +++++|++++| |.+|.+. +++++|+++|+++ |+++++|.++.. .+.+..
T Consensus 142 ~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~ 218 (402)
T PRK06107 142 VIVACPEEQGFKLTPEALEAAIT---PRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEP 218 (402)
T ss_pred EEecCCcccCCCCCHHHHHhhcC---cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCC
Confidence 88888643 4689999999986 68889999999 4789774 3588999999998 999999987531 111111
Q ss_pred CC--Cc----c-cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhH
Q 001579 778 SP--GY----I-GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1050)
Q Consensus 778 ~p--g~----~-GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~ 850 (1050)
.| .. + +--++..+++|+|+.| |-++|++++++++...+... ......+.+...+.
T Consensus 219 ~~~~~~~~~~~~~~vi~~~S~SK~~~~p----GlRiG~~~~~~~~~~~~~~~--------------~~~~~~~~s~~~q~ 280 (402)
T PRK06107 219 TPHLLAAAPELRDRVLVTNGVSKTYAMT----GWRIGYAAGPADLIAAINKL--------------QSQSSSCPSSISQA 280 (402)
T ss_pred CCCHHHhCcCccCCEEEEeccchhhcCc----ccceeeeecCHHHHHHHHHH--------------HHhcccCCChHHHH
Confidence 11 11 1 1235567789999654 67789999887765543210 00001111111222
Q ss_pred HHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccc---cccCC---CCHHHHH
Q 001579 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGL---KNTAG---IEPEDVA 924 (1050)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~---~~~~g---~~~~~va 924 (1050)
. +..++. -+..-+++..+...++.+++.+.|+++-.+.+..+.+.++ ++++++.+ ....+ .+..+++
T Consensus 281 ~----~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (402)
T PRK06107 281 A----AAAALN-GDQSFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFY--LYVNCAGLIGKTTPEGKVLETDQDVV 353 (402)
T ss_pred H----HHHHhc-CChHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE--EeeecccccccccccccCCCCHHHHH
Confidence 1 112221 1333344555555667788888887641222222223221 34454321 00011 1456777
Q ss_pred HHH-HHCCcccC-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 925 KRL-MDYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 925 krL-~d~Gi~~~-~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
+.| .++|+.+. .-.|...+++||++.. +.+++++.++.|.+.+++
T Consensus 354 ~~l~~~~gv~v~pg~~Fg~~~~iRis~~~--~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 354 LYLLDSAGVAVVQGTAYGLSPYFRLSIAT--SLETLEEACARIERAVAA 400 (402)
T ss_pred HHHHHhCCEEEeCccccCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHh
Confidence 665 57899864 3345556899999984 588888888888776654
No 385
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.55 E-value=4.9e-13 Score=153.63 Aligned_cols=281 Identities=18% Similarity=0.163 Sum_probs=172.5
Q ss_pred cHHHHHHHHHHHHHHhhCCCe-eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEc---CCCCCccHHHHHhCCCEE
Q 001579 629 GYQEMFNNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIP---VSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~-~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip---~saHgt~pa~a~~~G~~v 704 (1050)
|..+...++++.+++++|.+. ..+..++|.+++.+++.++. .++++|+++ ...|.+....+++.|.++
T Consensus 51 g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~--------~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~ 122 (346)
T TIGR03576 51 GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALE--------PPGRKVVHYLPEKPAHPSIPRSCKLAGAEY 122 (346)
T ss_pred CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhC--------CCCCEEEECCCCCCCchhHHHHHHHcCCEE
Confidence 555778899999999999943 23556777777755544432 245788864 346766666788899886
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccc--cCHHHHHHHHHHcCCEEEEecccccccccc-CC-C-
Q 001579 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGL-TS-P- 779 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~gl-~~-p- 779 (1050)
+.. .|+++++. . +++++|+++..|..|.+- +++++|+++|+++|++|++|.|+.....+. .. +
T Consensus 123 ~~~-------~~l~~l~~-~----~~~~lIiitg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~ 190 (346)
T TIGR03576 123 FES-------DELSELKK-I----DGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPA 190 (346)
T ss_pred ecc-------CCHHHHhh-C----cCceEEEEECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCH
Confidence 432 25565432 2 467888888777778761 379999999999999999999975432221 11 1
Q ss_pred CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHH
Q 001579 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1050)
Q Consensus 780 g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1050)
-.+|.|+++.+++|++ +|+.+|++++++++++.+.... +.. .++.+ +....++.+.
T Consensus 191 ~~~~~divv~s~SKal------aG~r~G~v~~~~~li~~l~~~~-----------~~~---~~s~~----~~~~~aa~~a 246 (346)
T TIGR03576 191 LDLGADLVVTSTDKLM------DGPRGGLLAGRKELVDKIKSVG-----------EQF---GLEAQ----APLLAAVVRA 246 (346)
T ss_pred HHcCCcEEEeccchhc------cccceEEEEeCHHHHHHHHHhh-----------cCc---ccCcc----HHHHHHHHHH
Confidence 2357899999999965 4688899999987776553110 000 11111 1122233344
Q ss_pred HHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCC-HHHHHHHHHHCCcccCC-C
Q 001579 860 IAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIE-PEDVAKRLMDYGFHGPT-M 937 (1050)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~-~~~vakrL~d~Gi~~~~-~ 937 (1050)
+..+. .....+....+.+++.+.|++ +.+ ++.+.+ + +.++++. .+ .+.+.+.|.++||.+.. .
T Consensus 247 L~~~~---~~~~~~~l~~r~~~~~~~l~~-~~~-~~~~~~-f---~~~~~~~------~~~~~~~~~ll~~~gV~v~~~~ 311 (346)
T TIGR03576 247 LEEFE---LSRIRDAFKRKEEVYLRLFDK-LNV-ERTPTG-F---VIKGVEE------EKLIEIGLDLLRNYGIITITAV 311 (346)
T ss_pred Hhhcc---HHHHHHHHHHHHHHHHHHHHh-CCC-CcCCCe-E---EEEeCCC------CCHHHHHHHHHHhCCEEEeCCc
Confidence 44332 223333444556666666664 333 221111 1 3445531 12 24455556688998654 3
Q ss_pred CCC-CCCEEEEEcCCCC-CHHHHHHHHHHHHHH
Q 001579 938 SWP-VPGTLMIEPTESE-SKEELDRYCDALISI 968 (1050)
Q Consensus 938 ~~p-v~~~lrI~~te~~-t~eeid~fv~aL~~i 968 (1050)
.|+ ..+++||++.... ++.|+++|+++|++.
T Consensus 312 ~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 312 GMPGASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred ccCCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 454 3689999987533 334799999999764
No 386
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.55 E-value=1.1e-12 Score=154.00 Aligned_cols=320 Identities=19% Similarity=0.248 Sum_probs=198.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC--
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-- 711 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~-- 711 (1050)
+.+|++.+++++|.+.+ +.+++|++|+..+++++- .++|+| ++.....++.....+.|.+++.+++++
T Consensus 55 ~~~Leeaia~~~g~~~v-v~t~~Gt~Al~la~~al~--------~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~ 124 (431)
T cd00617 55 FYDLEDAVQDLFGFKHI-IPTHQGRGAENILFSILL--------KPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAH 124 (431)
T ss_pred HHHHHHHHHHHHCCCeE-EEcCCHHHHHHHHHHHhC--------CCCCEE-ccCCcccchHHHHHhCCCEeEEEeccccc
Confidence 45788899999999875 566788887754444321 245666 455433344455778999999999863
Q ss_pred --------CCCCCHHHHHHHHHcC-CCCEEEEEEEcCC-Cc-cccc--cCHHHHHHHHHHcCCEEEEecccc--cccc--
Q 001579 712 --------KGNINIEELRKAAEAN-RDNLSTLMVTYPS-TH-GVYE--EGIDEICKIIHDNGGQVYMDGANM--NAQV-- 774 (1050)
Q Consensus 712 --------~g~iD~e~L~~~i~~~-~~~taaV~vt~Pn-~~-Gv~~--~di~eI~~la~~~G~~v~vD~A~~--~al~-- 774 (1050)
.|++|+++|+++|++. .+++++|++++|+ .+ |..- +++++|+++|++||++|+.|+|+. |+..
T Consensus 125 ~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~ 204 (431)
T cd00617 125 DAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIK 204 (431)
T ss_pred ccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhh
Confidence 2679999999999843 2458999999995 34 6553 358899999999999999999964 2221
Q ss_pred ----ccC--CCCcc------cCcEEEeCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCC
Q 001579 775 ----GLT--SPGYI------GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1050)
Q Consensus 775 ----gl~--~pg~~------GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~ 841 (1050)
+.. ++++. ..|.+++++||.++.| -.|+++.++ ++...+....+.. . .....+.
T Consensus 205 ~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~------~GG~i~~~d~~l~~~~~~~~~~~-~------~~~~~gG 271 (431)
T cd00617 205 EREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVN------IGGFLALRDDELYEEARQRVVLY-E------GFVTYGG 271 (431)
T ss_pred cccccccCCCHHHHHHHhhccCCEEEEEeecCCCCc------cceEEEeCcHHHHHHHHHhcccc-C------Ccccccc
Confidence 221 12221 4799999999987544 346888886 4665442111000 0 0000011
Q ss_pred CCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccc---cCC
Q 001579 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---TAG 917 (1050)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~---~~g 917 (1050)
.+ +. ...+....+... .+ . +..+..+.+++||.++|++. +++.. +.| .|-+.+|.+.+.. ..+
T Consensus 272 ~~----~r--~~~A~A~gL~e~-~~-~-~~l~~~~~~r~~l~~~L~~~G~~v~~--P~G--gh~v~~d~~~~~~~~~~~~ 338 (431)
T cd00617 272 MA----GR--DMEALAQGLREA-VE-E-DYLRHRVEQVRYLGDRLDEAGVPIVE--PAG--GHAVFIDAREFLPHIPQEQ 338 (431)
T ss_pred cc----HH--HHHHHHHHHHhc-cc-H-HHHHHHHHHHHHHHHHHHHCCCCccC--CCc--ceEEEEEhHHhcCCCCccc
Confidence 11 11 111111111110 11 1 22344456779999999985 66543 223 3557788765421 012
Q ss_pred CCHHHHHHHHH-HCCccc---CCCCC---C--------CCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 001579 918 IEPEDVAKRLM-DYGFHG---PTMSW---P--------VPGTLMIEPTE-SESKEELDRYCDALISIREEIAQIENGKAD 981 (1050)
Q Consensus 918 ~~~~~vakrL~-d~Gi~~---~~~~~---p--------v~~~lrI~~te-~~t~eeid~fv~aL~~i~~ei~~~~~~~~~ 981 (1050)
.+..+++.+|. +.||.+ +.+.+ | ....+|+.++- ..|.+++|..+++|+.+.+.-..|.-=++.
T Consensus 339 ~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (431)
T cd00617 339 FPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYERREDIRGLRIV 418 (431)
T ss_pred CcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhhHhhCCCeEEE
Confidence 35778887765 667874 22221 1 23678988875 578899999999999999998877644555
Q ss_pred CCCCcccc
Q 001579 982 IHNNVLKG 989 (1050)
Q Consensus 982 ~~~~~~~~ 989 (1050)
.+|.+|++
T Consensus 419 ~~~~~lr~ 426 (431)
T cd00617 419 YEPKLLRH 426 (431)
T ss_pred ecCcccee
Confidence 56666553
No 387
>PRK07683 aminotransferase A; Validated
Probab=99.55 E-value=1.6e-12 Score=151.91 Aligned_cols=300 Identities=15% Similarity=0.145 Sum_probs=180.6
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Cee-eec-cCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 628 QGYQEMFNNLGEWLCTITGF--DSF-SLQ-PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~--d~~-~l~-~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
+|..++..++.+++.+..|. +.. .+. +++++++.. ++++... .++++|+++...+..+...+.+.|++
T Consensus 65 ~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~---~~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~g~~ 136 (387)
T PRK07683 65 AGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAID---IAFRTIL-----EPGTEVILPAPIYPGYEPIIRLCGAK 136 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHH---HHHHHhC-----CCCCEEEEcCCCccchHHHHHHcCCE
Confidence 56666666666666555465 222 333 444454443 2333321 24578999988666666667889999
Q ss_pred EEEEcCCCC-CCCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cccCC
Q 001579 704 IVSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTS 778 (1050)
Q Consensus 704 vv~V~~d~~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~gl~~ 778 (1050)
++.++.+++ ..+|+++++++++ ++++++++++|+ .+|.+. +++++|+++|+++|+++++|.++..-. ..-..
T Consensus 137 ~~~~~~~~~~~~~~~~~l~~~~~---~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 213 (387)
T PRK07683 137 PVFIDTRSTGFRLTAEALENAIT---EKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHT 213 (387)
T ss_pred EEEeecCcccCCCCHHHHHHhcC---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcC
Confidence 999998765 4679999999986 678899999994 789873 359999999999999999999864211 11000
Q ss_pred C-Cc----ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHH
Q 001579 779 P-GY----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALIL 853 (1050)
Q Consensus 779 p-g~----~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~ 853 (1050)
+ .. .+-.+++.++.|.|+.| |-++|++++.++++..+-.. ......+.+...+.
T Consensus 214 ~~~~~~~~~~~vi~~~s~SK~~~~p----GlRiG~i~~~~~l~~~~~~~--------------~~~~~~~~~~~~q~--- 272 (387)
T PRK07683 214 SIAHFPEMREKTIVINGLSKSHSMT----GWRIGFLFAPSYLAKHILKV--------------HQYNVTCASSISQY--- 272 (387)
T ss_pred ChhhccCCcCCeEEEeeccccccCc----cceeEEEEcCHHHHHHHHHH--------------HHhccCCCChHHHH---
Confidence 1 11 12346677888998755 67899999987765543210 00011111111221
Q ss_pred HHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHH-HHHCCc
Q 001579 854 PISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR-LMDYGF 932 (1050)
Q Consensus 854 ~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakr-L~d~Gi 932 (1050)
++...+ ..|..-+++..+....+.+++.+.|++. .+.+..+.+.++ +++.++. .+.+..+++++ |.++||
T Consensus 273 -~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~ll~~~gI 343 (387)
T PRK07683 273 -AALEAL-TAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVEKPTGAFY--LFPSIGH----FTMSSFDFALDLVEEAGL 343 (387)
T ss_pred -HHHHHH-hCChHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCeeEE--EEEeccc----CCCCHHHHHHHHHHhCCE
Confidence 111222 1233334455555567788888888774 221111222221 3334431 13456678876 467899
Q ss_pred ccC-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 933 HGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 933 ~~~-~~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
.+. ...|. ..+.+||++.. +++++...++.|.++++
T Consensus 344 ~v~pg~~f~~~~~~~~Ri~~~~--~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 344 AVVPGSAFSEYGEGYVRLSYAY--SIETLKEGLDRLEAFLQ 382 (387)
T ss_pred EEcCchhhCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 864 33332 25789999874 57777777777766554
No 388
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.55 E-value=8.2e-13 Score=153.18 Aligned_cols=289 Identities=15% Similarity=0.158 Sum_probs=179.5
Q ss_pred cHHHHHHHHHHHHHHhhCC--CeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEE
Q 001579 629 GYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVS 706 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~--d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~ 706 (1050)
|..++.+.+.+++.+..|. +...+..++|++. +..++++++. .+++.|+++...+..+...+...|.+++.
T Consensus 66 g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~--~l~~~~~~~~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~~ 138 (368)
T PRK03317 66 DAVALRADLAAYLTAQTGVGLTVENVWAANGSNE--ILQQLLQAFG-----GPGRTALGFVPSYSMHPIIARGTHTEWVE 138 (368)
T ss_pred chHHHHHHHHHHhhhhccCCCChhhEEECCCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHhcCCeeEE
Confidence 5545555555565555454 3445666666653 2333444432 24578998887665566667889999999
Q ss_pred EcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccc-cccccCCCCc---
Q 001579 707 VGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMN-AQVGLTSPGY--- 781 (1050)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~-al~gl~~pg~--- 781 (1050)
++.+++..+|++++++++++ .++++|++++| |.+|.+. +.+++.++++.+++++++|.++.. ...+......
T Consensus 139 ~~~~~~~~~d~~~l~~~~~~--~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~ 215 (368)
T PRK03317 139 GPRAADFTLDVDAAVAAIAE--HRPDVVFLTSPNNPTGTAL-PLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLP 215 (368)
T ss_pred cccCCCCCCCHHHHHHHHhc--cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHH
Confidence 88766678999999999973 35677888999 4699997 789999999888999999998632 1111101001
Q ss_pred ccCc-EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHH
Q 001579 782 IGAD-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYI 860 (1050)
Q Consensus 782 ~GaD-v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l 860 (1050)
...+ +++.++.|.|++ .|.++|++++++++...+... ..+..++ ...+. ++.+.+
T Consensus 216 ~~~~~i~~~SfSK~~g~----~GlRiG~~~~~~~~~~~l~~~--------------~~~~~~s--~~~~~----a~~~~l 271 (368)
T PRK03317 216 EYPRLVVSRTMSKAFAF----AGGRLGYLAAAPAVVDALRLV--------------RLPYHLS--AVTQA----AARAAL 271 (368)
T ss_pred hCCCEEEEEechhhhcc----chhhhhhhhCCHHHHHHHHhc--------------CCCCCCC--HHHHH----HHHHHh
Confidence 1124 445577888854 367899999887766544210 0001111 11221 222223
Q ss_pred HHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEE-ecccccccCCCCHHHHHHHHHHCCcccCCCCC
Q 001579 861 AMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIV-DLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1050)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~-~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~ 939 (1050)
.. .+.+.+..++...+.+++.+.|++. .+.+..+.+.+ +++ ++. +..++.+.|.++|+.+....
T Consensus 272 ~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~---~~~~~~~--------~~~~~~~~l~~~Gv~v~~~~- 336 (368)
T PRK03317 272 RH--ADELLASVAALRAERDRVVAWLREL-GLRVAPSDANF---VLFGRFA--------DRHAVWQGLLDRGVLIRDVG- 336 (368)
T ss_pred hC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCEeCCCCCcE---EEEeccC--------CHHHHHHHHHHCCEEEEeCC-
Confidence 21 2233444444556677788888764 22222222322 233 221 46789999999999876433
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 940 PVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 940 pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
.++.+||+++ +.+++++|+++|.+++.
T Consensus 337 -~~~~iRi~~~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 337 -IPGWLRVTIG---TPEENDAFLAALAEVLA 363 (368)
T ss_pred -CCCeEEEecC---CHHHHHHHHHHHHHHHH
Confidence 2578999975 67899999999998864
No 389
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.55 E-value=2.4e-12 Score=153.28 Aligned_cols=332 Identities=16% Similarity=0.182 Sum_probs=198.2
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC--eeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d--~~~l~~~sGa~ge~a~Llair 669 (1050)
+.+|++++++..++..+. ....+.....+ ..+...++.+.|+++++.+ .-.++.+||++++++++..+|
T Consensus 66 ~~lGh~~p~v~~ai~~q~-~~~~~~~~~~~--------~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr 136 (451)
T PRK06918 66 INVGHSHPKVKEALHKQV-DQYIHTGFNVM--------MYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIAR 136 (451)
T ss_pred cCCCCCCHHHHHHHHHHH-HhccCcccccc--------ccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHH
Confidence 467888887777766653 21111111001 1133557888999998632 234778999999999999888
Q ss_pred HHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCC-------------EEEEEcCCC-----CCCCC-------HHHHHHH
Q 001579 670 AYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGM-------------KIVSVGTDA-----KGNIN-------IEELRKA 723 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~-------------~vv~V~~d~-----~g~iD-------~e~L~~~ 723 (1050)
.|. +|++|| ...++||....+....|- .+..+|... .+..+ ++.+++.
T Consensus 137 ~~t------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (451)
T PRK06918 137 KYT------KRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNF 210 (451)
T ss_pred HHh------CCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHH
Confidence 772 234455 577899988766543221 133344321 11111 2334444
Q ss_pred HHc--CCCCEEEEEEEcCC-Cccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCC------ccc--CcEEEe
Q 001579 724 AEA--NRDNLSTLMVTYPS-THGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------YIG--ADVCHL 789 (1050)
Q Consensus 724 i~~--~~~~taaV~vt~Pn-~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg------~~G--aDv~~~ 789 (1050)
+.. +.+++++|+++... ..|++. +.+++|.++|++||++++.|.++ .|+.+.| .++ +|++++
T Consensus 211 ~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~----tg~gr~g~~~a~~~~~v~pDi~t~ 286 (451)
T PRK06918 211 FISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQ----TGFARTGKYFAIEHFDVVPDLITV 286 (451)
T ss_pred HHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc----cCcCccCceehhHhcCCCCCEEee
Confidence 421 34678888887543 446543 24999999999999999999874 4443333 234 787765
Q ss_pred CCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHH
Q 001579 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1050)
Q Consensus 790 ~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1050)
.|.++ +|..+|++++++++...+.... ..+. +.|+++.++++.+.+..+..+++.
T Consensus 287 --sK~l~-----~G~pig~v~~~~~i~~~~~~~~--------------~~~T----~~g~~l~~aaa~a~l~~i~~~~~~ 341 (451)
T PRK06918 287 --SKSLG-----AGVPISGVIGRKEIMDESAPGE--------------LGGT----YAGSPLGCAAALAVLDIIEKENLN 341 (451)
T ss_pred --ehhhc-----CCCccEEEEEcHHHHhccCCCC--------------cCcC----CCcCHHHHHHHHHHHHHHHHCCHH
Confidence 68874 4577999999887765542100 0111 224555566667777777555554
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccc-ccccCCCCHHHHHHHHHHCCcccCCC-CCCCC
Q 001579 870 EASKIAILNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LKNTAGIEPEDVAKRLMDYGFHGPTM-SWPVP 942 (1050)
Q Consensus 870 ~~a~~~~~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~-~~~~~g~~~~~vakrL~d~Gi~~~~~-~~pv~ 942 (1050)
+.+ ....+++.++|+++ ++++ ..|. |.. .-+.+...+ .+.........+.+.|.++|+.+... .| .
T Consensus 342 ~~~---~~~g~~l~~~l~~l~~~~~~~~~vrg~-G~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~--~ 414 (451)
T PRK06918 342 DRA---IELGKVVMNRFEEMKNKYNCIGDVRGL-GAM-CAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY--G 414 (451)
T ss_pred HHH---HHHHHHHHHHHHHHHhhCCCceeeccc-eeE-EEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC--C
Confidence 433 34567778887764 3321 2232 322 111121010 00000112456778888999987432 22 4
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 943 GTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 943 ~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
+.+|++|+...++++||+++++|.+++.++.+
T Consensus 415 ~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~ 446 (451)
T PRK06918 415 NVIRVLMPLVITDEQLEEGLTIIEESLQACYE 446 (451)
T ss_pred CEEEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 78999999889999999999999999987754
No 390
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.54 E-value=1.1e-12 Score=154.63 Aligned_cols=145 Identities=17% Similarity=0.200 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEEEEEc
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 708 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~vv~V~ 708 (1050)
...++++.++++.|.+.+ +..+||+.+..++++++ . .++++||++...|+.+.. .+...|+++++++
T Consensus 70 t~~~le~~la~l~g~~~~-v~fsSG~~Ai~~al~~l---l-----~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 140 (437)
T PRK05613 70 TVEALENRIASLEGGVHA-VAFASGQAAETAAILNL---A-----GAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE 140 (437)
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHh---c-----CCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC
Confidence 356889999999998644 55677776554443332 1 246789998877766532 2456899999997
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEE
Q 001579 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~ 787 (1050)
+. .|+++++++++ ++|++|++..| |.+|.+. ||++|+++||++|++++||+++. .+.+..|-++|+|++
T Consensus 141 -~~---~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~-di~~I~~la~~~gi~livD~t~a--~g~~~~p~~~GaDiv 210 (437)
T PRK05613 141 -NP---DDPESWQAAVQ---PNTKAFFGETFANPQADVL-DIPAVAEVAHRNQVPLIVDNTIA--TAALVRPLELGADVV 210 (437)
T ss_pred -CC---CCHHHHHHhCC---ccCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCeEEEECCCc--cccccChHHhCCCEE
Confidence 33 28999999997 78988888777 5678887 89999999999999999999864 333457778999999
Q ss_pred EeCCccccc
Q 001579 788 HLNLHKTFC 796 (1050)
Q Consensus 788 ~~~~hKtf~ 796 (1050)
++++||+++
T Consensus 211 v~S~~K~l~ 219 (437)
T PRK05613 211 VASLTKFYT 219 (437)
T ss_pred Eeeccceec
Confidence 999999884
No 391
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.54 E-value=6.2e-13 Score=156.90 Aligned_cols=294 Identities=22% Similarity=0.269 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCC----Cc--cHHHHHhCCCEEE
Q 001579 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAH----GT--NPATAAMCGMKIV 705 (1050)
Q Consensus 632 ~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saH----gt--~pa~a~~~G~~vv 705 (1050)
....++++.+++++|.+.+ +.+++|+.|...++ ..+ .++++||+++..| |+ .|..+...|++++
T Consensus 122 ~r~~~le~~lA~l~gae~a-lvv~sg~aAi~l~l---~~l------~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~ 191 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAEDA-LVVNNNAAAVLLAL---NTL------AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLV 191 (454)
T ss_pred hHHHHHHHHHHHHhCCCcE-EEECCHHHHHHHHH---HHh------CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEE
Confidence 3467899999999999875 34677776653333 221 2457899987654 22 2334667899999
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCC---ccc--cccCHHHHHHHHHHcCCEEEEeccccc--c---ccc
Q 001579 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST---HGV--YEEGIDEICKIIHDNGGQVYMDGANMN--A---QVG 775 (1050)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~---~Gv--~~~di~eI~~la~~~G~~v~vD~A~~~--a---l~g 775 (1050)
.++.+ +..|+++++++|+ ++|++|++++++. .|. +. |+++|+++||++|+++++|.+... . ++.
T Consensus 192 ~v~~~--~~~~l~dle~aI~---~~T~lv~~~h~sN~~~~G~~~~~-dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl 265 (454)
T TIGR00474 192 EVGTT--NRTHLKDYEDAIT---ENTALLLKVHTSNYRIVGFTEEV-SIAELVALGREHGLPVMEDLGSGSLVDLSRYGL 265 (454)
T ss_pred EeCCC--CCCCHHHHHHhcC---cCCEEEEEEccCcccccCCCCCC-CHHHHHHHHHHcCCeEEEECCCcccccchhccC
Confidence 98763 4578999999997 8899999988853 353 33 799999999999999999964110 0 000
Q ss_pred -----cCCCCcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCc--chhh
Q 001579 776 -----LTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA--APWG 848 (1050)
Q Consensus 776 -----l~~pg~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~s--a~~g 848 (1050)
+..+.++|+|++++++||+| |||..|++++++++.+.+..+...... +-+ |. .+.. .-.|
T Consensus 266 ~~~p~~~~~~~~GaDiv~fSg~K~L------gGp~~G~i~g~~~~i~~l~~~~l~r~l---r~~--k~--~la~l~~~l~ 332 (454)
T TIGR00474 266 PDEPTVQEVIAAGVDLVTFSGDKLL------GGPQAGIIVGKKELIERLKKNPLTRAL---RVD--KL--TLAALEATLR 332 (454)
T ss_pred CCCcccccHhHcCCCEEEecCcccc------CCCeEEEEEECHHHHHhhhhchhHHHH---hhC--hH--HHHHHHHHHH
Confidence 12345689999999999998 577889999998877666543322100 000 00 0000 0000
Q ss_pred hHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc----C--Ceeec----C--C-CCccceeEEEeccccccc
Q 001579 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH----Y--PILFR----G--V-NGTVAHEFIVDLRGLKNT 915 (1050)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~----~--~v~~~----g--~-~g~~~~e~i~~~~~~~~~ 915 (1050)
....--.+| ...-|-+-+....++..++|..+++.|++. + ++... | . .+.....+.+.+.+
T Consensus 333 ~~~~~~~a~--~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~---- 406 (454)
T TIGR00474 333 LYLDPEKAL--EKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTP---- 406 (454)
T ss_pred HHhCchhhh--hhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEec----
Confidence 000000011 111111112222344556778888888653 1 22211 1 0 01112334454432
Q ss_pred CCCCHHHHHHHHHHCC--cccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q 001579 916 AGIEPEDVAKRLMDYG--FHGPTMSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 916 ~g~~~~~vakrL~d~G--i~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL 965 (1050)
.+.++.++.++|++.. |.+. +. .+.+.+-+-- ...+|++.++++|
T Consensus 407 ~~~~~~~l~~~lr~~~~~ii~r-~~---~~~~~ld~r~-~~~~~~~~~~~~~ 453 (454)
T TIGR00474 407 DGLSAEKLEARLRELPPPIIGR-IE---DDRFLLDLRT-LLEDEEELLIEAL 453 (454)
T ss_pred CCCCHHHHHHHHhcCCCCEEEE-EE---CCEEEEEeCc-CCHHHHHHHHHHh
Confidence 2567899999998654 2222 11 4666666543 3567888888765
No 392
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.54 E-value=5.6e-13 Score=156.19 Aligned_cols=219 Identities=21% Similarity=0.226 Sum_probs=148.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..+|++.++++.|.+.+ +..++|+.+..++++++. .++++||++...|+..... +...|++++.++.
T Consensus 66 ~~~Le~~iA~~~g~~~~-l~~~sG~~Ai~~al~~ll--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 136 (400)
T PRK06234 66 STEVENKLALLEGGEAA-VVAASGMGAISSSLWSAL--------KAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT 136 (400)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence 45789999999998754 667788776644443321 2457899988877654432 4668999999876
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHc--CCEEEEeccccccccccCCCCcccCcE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPGYIGADV 786 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~--G~~v~vD~A~~~al~gl~~pg~~GaDv 786 (1050)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++ |+++++|+++... .+..|..+|+|+
T Consensus 137 -----~d~e~l~~~i~---~~tklI~iesP~NPtG~v~-dl~~I~~la~~~~~~i~livDea~~~~--~~~~~l~~g~Di 205 (400)
T PRK06234 137 -----SNLEEVRNALK---ANTKVVYLETPANPTLKVT-DIKAISNIAHENNKECLVFVDNTFCTP--YIQRPLQLGADV 205 (400)
T ss_pred -----CCHHHHHHHhc---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHhcCCCCEEEEECCCCch--hcCCchhhCCcE
Confidence 38999999997 78999999999 4789887 799999999997 9999999986432 234666779999
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
++.+++|+|+.+ |...+|++++++++.+.+... +. ...++...+ ++ .+| +...|-+
T Consensus 206 vv~S~sK~l~g~---g~~~gG~v~~~~~~~~~l~~~--~~---------~~~~g~~l~-p~-------~a~--l~~~~l~ 261 (400)
T PRK06234 206 VVHSATKYLNGH---GDVIAGFVVGKEEFINQVKLF--GI---------KDMTGSVIG-PF-------EAF--LIIRGMK 261 (400)
T ss_pred EEeeccccccCC---CCceeEEEEecHHHHHHHHHH--HH---------HHhcCCCCC-HH-------HHH--HHHhccC
Confidence 999999999522 112368999887765543210 00 000111111 11 122 2333334
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccC---CeeecC
Q 001579 867 GLTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~~---~v~~~g 896 (1050)
-+....++..+|+.++++.|+++. .|.|++
T Consensus 262 tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~ 294 (400)
T PRK06234 262 TLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPG 294 (400)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCC
Confidence 455566667789999999998752 344554
No 393
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.54 E-value=3.1e-13 Score=156.84 Aligned_cols=217 Identities=17% Similarity=0.121 Sum_probs=144.0
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+. ..++|..|..++++++. .++|+||+++..++..... ....|+++..++.
T Consensus 52 ~~~lE~~lA~l~g~~~~~-~~~sG~~Ai~~al~all--------~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~ 122 (377)
T TIGR01324 52 HFALQDAMCELEGGAGCY-LYPSGLAAVTNSILAFV--------KAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP 122 (377)
T ss_pred HHHHHHHHHHHhCCCcEE-EECcHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 347889999999987654 45677766654444331 2467899887655433221 3457888887754
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+ +.++++++++ ++|++|++++| |.+|.+. ||++|+++||++|+++++|+++.. +.+.+|.++|+|+++
T Consensus 123 ~-----~~e~l~~~i~---~~tklV~lesp~Np~g~~~-dl~~I~~la~~~g~~livD~t~a~--g~~~~pl~~gaDivv 191 (377)
T TIGR01324 123 L-----IGEDIATLIQ---PNTKVLFLEAPSSITFEIQ-DIPAIAKAARNPGIVIMIDNTWAA--GLLFKPLEHGVDISI 191 (377)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCcc--ccccCccccCceEEE
Confidence 2 2378988886 78999999999 4678887 899999999999999999998653 334568889999999
Q ss_pred eCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhH
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1050)
.+++|+++.+ ++-.+|++++++++...+-... ...+..-+ + ..+|..++ |-+-+
T Consensus 192 ~S~tK~l~G~---~d~~gG~v~~~~~~~~~l~~~~-------------~~~G~~l~-p-------~~a~~~~r--gl~tl 245 (377)
T TIGR01324 192 QAGTKYLVGH---SDIMIGTVVANARTWDQLREHS-------------YLMGQMVD-A-------DDAYTTLR--GLRTL 245 (377)
T ss_pred ecCceeccCC---CCceEEEEEeCHHHHHHHHHHH-------------HHhCCCCC-H-------HHHHHHHh--hhhhH
Confidence 9999999522 2234688888765433321000 00111111 1 12343333 33445
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 869 TEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 869 ~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
....++..++|..+++.|+++ -.|.|++
T Consensus 246 ~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~ 276 (377)
T TIGR01324 246 GVRLKQHQESSLAIAKWLSEQPEVARVLHPA 276 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcCEEECCC
Confidence 555677778888999999875 2455554
No 394
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.54 E-value=7.3e-13 Score=156.07 Aligned_cols=234 Identities=18% Similarity=0.175 Sum_probs=153.9
Q ss_pred HHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hhh
Q 001579 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KDI 291 (1050)
Q Consensus 215 e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~l 291 (1050)
++++.+|++.|.+. +.++.+|++++.++++++. . +||+|+++...|+.+...+.......|+++..++. +++
T Consensus 62 ~Le~~lA~l~g~~~--~l~~ssG~~Ai~~al~al~-~--~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~l 136 (425)
T PRK06084 62 VLEQRVAALEGGVG--ALAVASGMAAITYAIQTIA-E--AGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAAL 136 (425)
T ss_pred HHHHHHHHHhCCCc--eeEehhHHHHHHHHHHHHh-C--CCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHH
Confidence 57789999999654 6688999988887776652 2 78999999999988887776555667899888754 566
Q ss_pred hc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCCc
Q 001579 292 DY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGP 368 (1050)
Q Consensus 292 ~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GGP 368 (1050)
++ +++++++|++.+| |.+|.+.|+++|+++||++|++++| ++.++.+....|.++|+||++.|. |.|++| |..
T Consensus 137 e~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVv-D~a~a~~~~~~p~~~gaDivv~S~tK~l~G~---g~~ 212 (425)
T PRK06084 137 EALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIV-DNTVATPVLCRPFEHGADIVVHSLTKYIGGH---GTS 212 (425)
T ss_pred HHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEE-ECCCcccccCChhhcCCCEEEECchhccccc---ccc
Confidence 66 7788999999988 8899999999999999999999999 456676766677789999999998 887643 333
Q ss_pred ceEEEEEehhhh-hcCCCcEEeEeecCCCCcceEEecccccccc-------cc---cccCCCccchhHHHHHHHHHHHHH
Q 001579 369 HAAFLATSQEYK-RMMPGRIVGVSIDSSGKPALRVAMQTREQHI-------RR---DKATSNICTAQALLANMAAMYAVY 437 (1050)
Q Consensus 369 ~~G~la~~~~~~-r~lpgrivG~s~d~~g~~~~~l~lqtreq~i-------rR---ekaTsnict~~~l~a~~aa~y~~~ 437 (1050)
-+|++..+.... ..+..+. ..-.. ..+.|.- +...+.+- +| ..+. |.+ +...- .|+..
T Consensus 213 ~gG~v~~~~~~~~~~~~~~~-~~~~~--~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~-g~~----l~~~~--a~l~l 281 (425)
T PRK06084 213 IGGIVVDSGKFPWAEHKERF-ALLNT--PDPSYHG-VTYTEAFGPAAFIGRCRVVPLRNM-GAA----LSPFN--AFLIL 281 (425)
T ss_pred eeEEEEeCCccchhhccccc-ccccc--CCccccc-chhhhhcchHHHHHHHHHHHHHhc-CCC----CCHHH--HHHHH
Confidence 456665443211 1111110 10000 0010100 00011110 00 0011 110 11111 13456
Q ss_pred hCcccHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 001579 438 HGPEGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 438 ~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.|-+-+..+.++..++|..+++.|++.+.++
T Consensus 282 rgl~tl~~R~~~~~~na~~la~~L~~~p~v~ 312 (425)
T PRK06084 282 QGLETLALRMERHTENALKVARYLQQHPQVA 312 (425)
T ss_pred cCcCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 6666777788888899999999999986454
No 395
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.54 E-value=1.6e-12 Score=158.21 Aligned_cols=299 Identities=13% Similarity=0.100 Sum_probs=193.1
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC-
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~- 712 (1050)
+.|.|+..++++|.|.+.+..|+++.|+.+++++.- .++++||++.+.|-+......+.|++.+.++...+
T Consensus 197 i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~--------~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~ 268 (713)
T PRK15399 197 HLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAA--------PAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNA 268 (713)
T ss_pred HHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhc--------CCCCEEEeecccHHHHHHHHHHcCCeeEEecccccc
Confidence 779999999999999988888988888877776643 25689999999998888888999999999975432
Q ss_pred ----CCCCH-----HHHHHHHHcCCC--CEEEEEEEcCCCccccccCHHHHHHHHHHcCCEE-EEeccccccccccCC--
Q 001579 713 ----GNINI-----EELRKAAEANRD--NLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQV-YMDGANMNAQVGLTS-- 778 (1050)
Q Consensus 713 ----g~iD~-----e~L~~~i~~~~~--~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v-~vD~A~~~al~gl~~-- 778 (1050)
|.++. +.++++|+++.+ +.+++++|+|++.|++. |+++|.+++ |+.+ +||.|+.. ...|..
T Consensus 269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~y-d~~~I~~~~---g~~~ilvDEAhga-h~~F~p~~ 343 (713)
T PRK15399 269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLY-NTDWIKQTL---DVPSIHFDSAWVP-YTHFHPIY 343 (713)
T ss_pred cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceee-CHHHHHHHh---CCCEEEEeccchh-hhhcCccc
Confidence 45666 999999988742 23689999999999998 899999998 6766 69998642 222221
Q ss_pred C------CcccCcEE---EeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhh
Q 001579 779 P------GYIGADVC---HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1050)
Q Consensus 779 p------g~~GaDv~---~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~ 849 (1050)
| +.-|+|.+ +-|.||+++.- -..+.|-++.. +.-..+... - .-...+| ..|..
T Consensus 344 ~~~sam~~~~~aD~~i~~tQStHKtL~al-----TQaS~iHvk~~----vd~~~~n~a-------~-~m~~STS-PsY~L 405 (713)
T PRK15399 344 QGKSGMSGERVPGKVIFETQSTHKMLAAF-----SQASLIHIKGE----YDEETFNEA-------F-MMHTSTS-PSYPI 405 (713)
T ss_pred CCcChhhCCCCCCeeeeeeeehhcccccc-----chheeeeecCC----CCHHHHHHH-------H-HHHcCCC-cHHHH
Confidence 1 11157888 88999998521 12345544321 110000000 0 0001111 12222
Q ss_pred HHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccC--------Ceeec-------------CCC----------
Q 001579 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHY--------PILFR-------------GVN---------- 898 (1050)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~--------~v~~~-------------g~~---------- 898 (1050)
...+-.|.++|. |..| ++..+..++.+..++++|.++. .+.-+ +..
T Consensus 406 mASLD~a~~~m~--~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~ 482 (713)
T PRK15399 406 VASVETAAAMLR--GNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADAD 482 (713)
T ss_pred HHHHHHHHHHHH--hhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccc
Confidence 222233333332 2344 3345566677778888886532 22100 000
Q ss_pred ----CccceeEEEeccccc-----ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 899 ----GTVAHEFIVDLRGLK-----NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 899 ----g~~~~e~i~~~~~~~-----~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
+|. -+++.++.+. .+.|+++..+++.|.++||.+-... ...+.+.+|...|++++++++++|.++.
T Consensus 483 ~~~lDP~--KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d---~~~vL~l~s~g~t~~~~~~L~~aL~~f~ 557 (713)
T PRK15399 483 HMFLDPV--KVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTG---PYNLLFLFSIGIDKTKAMGLLRGLTEFK 557 (713)
T ss_pred cccCCCc--eEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecC---CCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 111 1233333211 1347889999999999999875433 4678888899999999999999999885
Q ss_pred HH
Q 001579 970 EE 971 (1050)
Q Consensus 970 ~e 971 (1050)
+.
T Consensus 558 ~~ 559 (713)
T PRK15399 558 RA 559 (713)
T ss_pred Hh
Confidence 43
No 396
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.54 E-value=2.1e-12 Score=151.26 Aligned_cols=257 Identities=19% Similarity=0.191 Sum_probs=158.7
Q ss_pred CCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC-CCC--CCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHH
Q 001579 679 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA-KGN--INIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEI 752 (1050)
Q Consensus 679 ~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~-~g~--iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI 752 (1050)
++++|++++..++.+...++..|++++.++.+. +|. .|+++|+++++ +++++|++++|+ .+|.+. +++++|
T Consensus 111 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i 187 (397)
T PRK07568 111 PGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT---PKTKAILISNPGNPTGVVYTKEELEML 187 (397)
T ss_pred CCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC---ccceEEEEECCCCCCCccCCHHHHHHH
Confidence 457899988766655556788999999999863 342 36899999886 688999999994 789775 258999
Q ss_pred HHHHHHcCCEEEEecccccc-ccc--cCCCCcc-c-Cc--EEEeCCccccccCCCCCCCcceeeeec-ccccCCCCCCcc
Q 001579 753 CKIIHDNGGQVYMDGANMNA-QVG--LTSPGYI-G-AD--VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPV 824 (1050)
Q Consensus 753 ~~la~~~G~~v~vD~A~~~a-l~g--l~~pg~~-G-aD--v~~~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~v 824 (1050)
+++|+++|+++++|.++..- ..+ ......+ + .| +++.+++|+|++| |.++|++++. +.+...+-..
T Consensus 188 ~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~----G~R~G~~~~~~~~~~~~~~~~-- 261 (397)
T PRK07568 188 AEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSAC----GARIGCLISKNKELIAAAMKL-- 261 (397)
T ss_pred HHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCC----CcceEEEecCCHHHHHHHHHH--
Confidence 99999999999999875311 011 0011111 1 22 6677888988643 6789999874 4444322100
Q ss_pred ccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCcccee
Q 001579 825 VSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHE 904 (1050)
Q Consensus 825 g~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e 904 (1050)
. . ...+.+...+. ++..++. .+++-+++..+...++.+++.+.|+++..+.+..+.+.++
T Consensus 262 ----------~-~--~~~~~s~~~q~----~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~-- 321 (397)
T PRK07568 262 ----------C-Q--ARLSPPTLEQI----GAAALLD-TPESYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFY-- 321 (397)
T ss_pred ----------h-h--ccCCCCcHHHH----HHHHHhh-CCHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceE--
Confidence 0 0 01111112221 1122222 2344455556666677888999998752222222223221
Q ss_pred EEEecccccccCCCCHHHHHHHHHH------CCcccC-CCCC---CC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 905 FIVDLRGLKNTAGIEPEDVAKRLMD------YGFHGP-TMSW---PV--PGTLMIEPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 905 ~i~~~~~~~~~~g~~~~~vakrL~d------~Gi~~~-~~~~---pv--~~~lrI~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
+.++++. .+..+++++|.+ +|+.+. .-.| |. .+.+||++. .+.+++++.++.|.+++++.
T Consensus 322 ~~~~l~~------~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~--~~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 322 IIAKLPV------DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV--LNEEDLKRAMEILKEALEKY 393 (397)
T ss_pred EEEecCC------CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe--CCHHHHHHHHHHHHHHHHHh
Confidence 3455531 256788888875 588753 2223 21 368999986 35788999998888877653
No 397
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.54 E-value=2.1e-12 Score=147.94 Aligned_cols=214 Identities=21% Similarity=0.203 Sum_probs=155.4
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchh--
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-- 290 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~-- 290 (1050)
...+|+.+|+|-|.+. +..+++|.+|+.+..+++. ++||+||+++.++..+...+....+++||++..+|..+
T Consensus 65 ~~~lE~~~a~LEg~~~--~~afsSGmaAI~~~~l~ll---~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~ 139 (396)
T COG0626 65 RDALEEALAELEGGED--AFAFSSGMAAISTALLALL---KAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDE 139 (396)
T ss_pred HHHHHHHHHHhhCCCc--EEEecCcHHHHHHHHHHhc---CCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChH
Confidence 3457789999998876 7789999999888777652 27999999999999999998888888999999887633
Q ss_pred -hhc-cC-CCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCC
Q 001579 291 -IDY-KS-GDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1050)
Q Consensus 291 -l~~-l~-~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~ 365 (1050)
+++ +. ++|++|++..| |.+-.+.||++|+++||++|++++| ++.++.+++..|-++||||++.|+ |.+++.-.
T Consensus 140 ~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvV-DNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsD- 217 (396)
T COG0626 140 ALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVV-DNTFATPVLQRPLELGADIVVHSATKYLGGHSD- 217 (396)
T ss_pred HHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEE-ECCcccccccChhhcCCCEEEEeccccccCCcc-
Confidence 333 44 58999999998 8899999999999999999988888 678899999999999999999998 87764211
Q ss_pred CCcceEEEEEehh-hhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHH
Q 001579 366 GGPHAAFLATSQE-YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLK 444 (1050)
Q Consensus 366 GGP~~G~la~~~~-~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~ 444 (1050)
--+|.+.++++ +..++ ....++.-|+ +- ++ .. .|+..-|-+-|.
T Consensus 218 --vl~G~v~~~~~~~~~~~------------------------~~~~~~~~G~--~l--~p----~d-A~l~lRGlkTL~ 262 (396)
T COG0626 218 --VLGGVVLTPNEELYELL------------------------FFAQRANTGA--VL--SP----FD-AWLLLRGLRTLA 262 (396)
T ss_pred --eeeeEEecChHHHHHHH------------------------HHHHHhhcCC--CC--CH----HH-HHHHHhccchHH
Confidence 12243333332 22211 0011111110 00 11 11 145555555566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCEE
Q 001579 445 TIAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 445 ~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
-+-++..++|..+++.|++...++
T Consensus 263 ~Rm~~~~~nA~~IA~~L~~~p~V~ 286 (396)
T COG0626 263 LRMERHNENALKIAEFLADHPKVK 286 (396)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeE
Confidence 666778899999999999875455
No 398
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.54 E-value=1e-12 Score=154.72 Aligned_cols=307 Identities=12% Similarity=0.093 Sum_probs=180.2
Q ss_pred ccHHHHHHHHHHHHHHhhC--------CCeeeeccCchH-HHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHH
Q 001579 628 QGYQEMFNNLGEWLCTITG--------FDSFSLQPNAGA-AGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA 698 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G--------~d~~~l~~~sGa-~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~ 698 (1050)
+|..++.+.+.+++.+.++ .+...+..++|+ ++. .++++.+. .++++|+++...|..+...++
T Consensus 75 ~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al---~~~~~~~~-----~~gd~vlv~~P~y~~~~~~~~ 146 (412)
T PTZ00433 75 VGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAI---LMALTALC-----DEGDNILVPAPGFPHYETVCK 146 (412)
T ss_pred CCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHH---HHHHHHhc-----CCCCEEEEccCCcccHHHHHH
Confidence 5665655555555554332 333344444554 443 23333331 245789999887777777788
Q ss_pred hCCCEEEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-
Q 001579 699 MCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA- 772 (1050)
Q Consensus 699 ~~G~~vv~V~~d~--~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a- 772 (1050)
..|++++.+++++ ++.+|+++|+++++ +++++|++++| |.+|.+- +++++|+++|+++|+++++|.++..-
T Consensus 147 ~~g~~~~~i~~~~~~~~~~d~~~l~~~~~---~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 223 (412)
T PTZ00433 147 AYGIEMRFYNCRPEKDWEADLDEIRRLVD---DRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMV 223 (412)
T ss_pred HcCCEEEEEecCccccCcCCHHHHHHHhc---cCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccc
Confidence 9999999999864 35799999999886 67899999999 4689753 36899999999999999999986421
Q ss_pred ccccC-CC-Ccc--cCc-EEEeCCccccccCCCCCCCcceeeeec-c-----cccCCCCCCccccCCCCCCCCCCCCCCC
Q 001579 773 QVGLT-SP-GYI--GAD-VCHLNLHKTFCIPHGGGGPGMGPIGVK-K-----HLAPFLPSHPVVSTGGIPAPEKSQPLGT 841 (1050)
Q Consensus 773 l~gl~-~p-g~~--GaD-v~~~~~hKtf~~P~g~GGPg~G~i~v~-~-----~l~~~lpg~~vg~~~~~~~~~~~~~t~~ 841 (1050)
..+-. .+ ..+ ..+ +++.++.|+|++| |-++|++++. + ++...+.. . . ....+
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~p----GlRlG~~i~~~p~~~~~~~~~~~~~--~----------~-~~~~~ 286 (412)
T PTZ00433 224 FNGATFTSVADFDTTVPRVILGGTAKNLVVP----GWRLGWLLLVDPHGNGGDFLDGMKR--L----------G-MLVCG 286 (412)
T ss_pred cCCCCccchhhccCCCceEEEccchhhcCCC----CeeEEEEEEeCCcccHHHHHHHHHH--H----------h-hccCC
Confidence 11100 01 111 112 5567788988654 7889999872 1 22221100 0 0 00011
Q ss_pred CCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCC-CCH
Q 001579 842 IAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAG-IEP 920 (1050)
Q Consensus 842 i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g-~~~ 920 (1050)
++ ...+. ++..++..-..+-+++..+....+.+++.+.|++...+.+..+.+..+ +.+.++.-.. .+ .+.
T Consensus 287 ~~--~~~q~----a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f--~~~~l~~~~~-~~~~~~ 357 (412)
T PTZ00433 287 PC--SVVQA----ALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMF--LMSRLDLEKF-RDIKSD 357 (412)
T ss_pred CC--hHHHH----HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEE--EEEEechhhc-CCCCCH
Confidence 11 11121 111222211123345555566677788888887642222211222221 3344431000 01 246
Q ss_pred HHHHHHHH-HCCcccC-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 921 EDVAKRLM-DYGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 921 ~~vakrL~-d~Gi~~~-~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
.+++++|. ++||.+. .-.|...+.+||++.. ..+++++.++.|.++++..+
T Consensus 358 ~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~--~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 358 VEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR--PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred HHHHHHHHHhcCEEEeCccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhc
Confidence 78999987 5899864 3335446899999974 47788888888887776544
No 399
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.54 E-value=7.6e-13 Score=153.30 Aligned_cols=302 Identities=19% Similarity=0.167 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC
Q 001579 632 EMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1050)
Q Consensus 632 ~~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~ 711 (1050)
....++++.+++.+|...+ +..+||+.|.+.+|.+ .|.+++++|++|..............|++++.+++|+
T Consensus 25 ~~~~~fE~~~a~~~g~~~~-~~~~sgt~Al~~al~~-------l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~ 96 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGVKYA-VAVSSGTSALHLALRA-------LGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDP 96 (363)
T ss_dssp HHHHHHHHHHHHHHTSSEE-EEESSHHHHHHHHHHH-------TTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BET
T ss_pred HHHHHHHHHHHHHhCCCeE-EEeCChhHHHHHHHHh-------cCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccC
Confidence 3467899999999998876 5567887766554443 2334678999997633333334567999999999984
Q ss_pred -CCCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEecccccccccc-CCCCcccCcEEEe
Q 001579 712 -KGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCHL 789 (1050)
Q Consensus 712 -~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl-~~pg~~GaDv~~~ 789 (1050)
++.+|+++++++|+ ++|++|++++ .+|..- |+++|.++|+++|+.|+-|+|+..+..-- ...|.+| |+.++
T Consensus 97 ~~~~id~~~~~~~i~---~~t~ai~~~h--~~G~~~-d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g-d~~~f 169 (363)
T PF01041_consen 97 ETLNIDPEALEKAIT---PKTKAILVVH--LFGNPA-DMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG-DIAIF 169 (363)
T ss_dssp TTSSB-HHHHHHHHH---TTEEEEEEE---GGGB----HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS-SEEEE
T ss_pred CcCCcCHHHHHHHhc---cCccEEEEec--CCCCcc-cHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC-CceEe
Confidence 59999999999998 8999999975 678887 89999999999999999999975432111 2346665 99999
Q ss_pred CCccccccCCCCCCCcceeeeecc-cccCCC---CCCccccCCCCC-CCCCCC-CCCCCCcchhhhHHHHHHHHHHHHHH
Q 001579 790 NLHKTFCIPHGGGGPGMGPIGVKK-HLAPFL---PSHPVVSTGGIP-APEKSQ-PLGTIAAAPWGSALILPISYTYIAMM 863 (1050)
Q Consensus 790 ~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~l---pg~~vg~~~~~~-~~~~~~-~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1050)
|+|.+=.++.|.| |++++++ ++.+.+ ..+ |...+.. +..... ...+..- +...++.+.+-|.
T Consensus 170 Sf~~~K~i~~geG----G~v~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~g~n~rm----~~~~AAigl~QL~-- 237 (363)
T PF01041_consen 170 SFHPTKIITTGEG----GAVVTNDPELAERARALRNH--GRSRDAFRRYRHELPPGYNFRM----SELQAAIGLAQLK-- 237 (363)
T ss_dssp ESSTTSSS-SSS-----EEEEESTHHHHHHHHHHTBT--TEETSECSTTEESSSS--B-B-----BHHHHHHHHHHHH--
T ss_pred cCCCCCCCcCCCC----eeEEecHHHHHHHhhhhhcc--CcCccccccccccccCCccccc----HHHHHHHHHHHHH--
Confidence 9874333333333 7888875 333222 111 1100000 000000 0011111 1222222333332
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhccCCe-eecCCCC---ccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-
Q 001579 864 GSKGLTEASKIAILNANYMAKRLEKHYPI-LFRGVNG---TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS- 938 (1050)
Q Consensus 864 G~eGl~~~a~~~~~~a~yl~~~L~~~~~v-~~~g~~g---~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~- 938 (1050)
-+.+..++..++++++.+.|++...+ ....+.+ ...+.+.+-+++. ...+.+++.+.|.++||......
T Consensus 238 ---~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~---~~~~rd~l~~~L~~~GI~~~~~~~ 311 (363)
T PF01041_consen 238 ---RLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDE---ALADRDELVEALRARGIETRPHYP 311 (363)
T ss_dssp ---THHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCC---GCSTHHHHHHHHHHTTBEEBCSTS
T ss_pred ---HhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccc---ccchHHHHHHHHHHCCCccccccc
Confidence 24555566668889999999886333 1111111 2344555555421 11357899999999999864322
Q ss_pred -------------------CCC-----CCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 939 -------------------WPV-----PGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 939 -------------------~pv-----~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
+|. ...|.+-.....+.+|+++++++|+
T Consensus 312 ~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 312 KPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp SCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred CchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 110 1356676777889999999999875
No 400
>PRK06460 hypothetical protein; Provisional
Probab=99.54 E-value=2.3e-12 Score=149.86 Aligned_cols=213 Identities=21% Similarity=0.223 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchh-
Q 001579 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD- 290 (1050)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~- 290 (1050)
...++++.+|++.|.+. +.++.+|++++.++++++ . ++||+|+++...++.+...+...++..|++++.++.++
T Consensus 46 ~~~~L~~~lA~l~g~~~--~v~~~sG~~ai~~~l~al-~--~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~ 120 (376)
T PRK06460 46 TVLELTKKIVELENAEM--GVAFSSGMGAISTTALAL-L--KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSD 120 (376)
T ss_pred cHHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-h--CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCH
Confidence 34567789999999876 456678887766666554 2 28899999988886666655555667899999887642
Q ss_pred --hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCC
Q 001579 291 --IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGY 365 (1050)
Q Consensus 291 --l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~ 365 (1050)
+++ +.+++++|++.+| |.+|.+.|+++|+++||++|++++|+ +..+.+....+.++|+||++.|. |.|++ .
T Consensus 121 ~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivD-ea~~~~~~~~~l~~~~divv~S~sK~l~G---~ 196 (376)
T PRK06460 121 NIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVD-ATFSTPINQKPLELGADIVVHSASKFLAG---H 196 (376)
T ss_pred HHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE-CCcCccccCChhhcCCCEEEeecceeccC---C
Confidence 333 4678999999998 78999999999999999999999994 34444433344567999999997 87752 2
Q ss_pred CCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHH
Q 001579 366 GGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 445 (1050)
Q Consensus 366 GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ 445 (1050)
|+.-+|+++.++++.+++- ..++. .++|. ++. ..|+...|.+-++.
T Consensus 197 ~~~~~G~~~~~~~l~~~l~-------------------------~~~~~---~g~~~-~~~-----~a~~~l~~~~~l~~ 242 (376)
T PRK06460 197 NDVIAGLAAGYGKLLNVID-------------------------QMRRT---LGTSL-DPH-----AAYLTLRGIKTLKI 242 (376)
T ss_pred CCceEEEEecCHHHHHHHH-------------------------HHHHh---cCCCC-CHH-----HHHHHHhchhhHHH
Confidence 3334788888777655441 00111 12221 111 22344556666778
Q ss_pred HHHHHHHHHHHHHHHHhcCCCE
Q 001579 446 IAQRVHGLAGTFALGLKKLGTV 467 (1050)
Q Consensus 446 ia~~~~~~a~~l~~~L~~~G~~ 467 (1050)
..+++.+++.++++.|++.+.+
T Consensus 243 r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 243 RMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred HHHHHHHHHHHHHHHHHcCCCc
Confidence 8889999999999999987534
No 401
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.54 E-value=8e-13 Score=152.43 Aligned_cols=294 Identities=15% Similarity=0.075 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHhcCCCCcc--eeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHH-HhccCCCe-EEEE
Q 001579 210 LESLLNFQTMIADLTGLPMSN--ASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICI-TRADGFDI-KVVV 285 (1050)
Q Consensus 210 le~l~e~q~~ia~L~G~~~an--asl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~-~~a~~~gi-~v~~ 285 (1050)
.+.+.+.++.+.+|++.+..+ +.+..+||+++||+++.+- . .+++++++.. .|..- |. ..++.+|+ ++..
T Consensus 38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~-~-~~g~~vLv~g-~FG~r---~~~eia~~~g~~~v~~ 111 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSML-G-CRGVDVLAWE-SFGKG---WVTDVTKQLKLPDVRV 111 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcC-C-CCCCeEEEEC-HHHHH---HHHHHHHhcCCCCcEE
Confidence 467778888999999985433 4456889999999988652 1 2678888764 44332 22 33555677 3555
Q ss_pred cCch-----hhhccCCCeeEEEEE-cCCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-cc
Q 001579 286 SDLK-----DIDYKSGDVCGVLVQ-YPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QR 358 (1050)
Q Consensus 286 ~~~~-----~l~~l~~~t~~V~v~-~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~ 358 (1050)
++.+ +++.+..+ +.|+++ +-+++|+..|+++|++.. ++++++|++ ..++|...-.-+ ++|+++.++ |.
T Consensus 112 l~~~~g~~~~~~~ve~~-~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDa-vSs~g~~~l~~d-~iDv~~tgsQK~ 186 (374)
T TIGR01365 112 LEAEYGKLPDLKKVDFK-NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDA-TSAAFAQDLDYH-KLDVVTFSWQKV 186 (374)
T ss_pred EcCCCCCCCCHHHcCCC-CCEEEecCCCchheecccccccccc--CCCcEEEEc-cchhcCCCCChh-HCcEEEEechhc
Confidence 5331 12222222 224455 458899999998777433 488999854 446664432222 599999999 66
Q ss_pred ccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEeccccc---ccccccccCCCccchhHHHHHHHHHHH
Q 001579 359 FGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTRE---QHIRRDKATSNICTAQALLANMAAMYA 435 (1050)
Q Consensus 359 ~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtre---q~irRekaTsnict~~~l~a~~aa~y~ 435 (1050)
|+.| ||++|++++++.+.++..+-- ..| -+. .+.++... .+.+ ..-|.|......++++..++
T Consensus 187 L~~p-----pGls~v~vs~~Al~~~~~~~~--y~~---~~~-~~~~~~~~~~~~~~~-~~~t~~TP~v~~l~a~~~~l-- 252 (374)
T TIGR01365 187 LGGE-----GAHGMLILSPRAVARLESYTP--AWP---LPK-IFRLTKGGKLNKKIF-EGSTINTPSMLCVEDWLDAL-- 252 (374)
T ss_pred cCCC-----CceEEEEECHHHHHHHhhcCC--CCC---Chh-hhccccccchhhhhh-cCCCCCChHHHHHHHHHHHH--
Confidence 8766 789999999988766431100 000 000 11111100 0111 22366665555665555554
Q ss_pred HHhCcc-cHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---CCccEE-EEec--C-------C-----HHHHHHHHHHcC
Q 001579 436 VYHGPE-GLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---PFFDTV-KVKC--A-------D-----AHAIASAAYKIE 496 (1050)
Q Consensus 436 ~~~g~~-Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~---~~~~~v-~i~~--~-------~-----~~~i~~~L~~~G 496 (1050)
.++..+ |++++.+|..++++.++++++++|.+.++.. ...+++ ++.. + + +.++.+.|.++|
T Consensus 253 ~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (374)
T TIGR01365 253 KWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEG 332 (374)
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCC
Confidence 444454 8999999999999999999999974566542 233432 2333 2 1 467889999999
Q ss_pred ceeee----ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 497 MNLRV----VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 497 I~~~~----~~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
|.+.. .-+..+||...-..+.+||++|++.|.
T Consensus 333 i~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~ 368 (374)
T TIGR01365 333 VAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLD 368 (374)
T ss_pred EEEeccccccCCCceEEecCCcCCHHHHHHHHHHHH
Confidence 97742 124789999999999999999999884
No 402
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.54 E-value=1.4e-12 Score=151.55 Aligned_cols=282 Identities=17% Similarity=0.179 Sum_probs=174.8
Q ss_pred HHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCCC
Q 001579 636 NLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNI 715 (1050)
Q Consensus 636 el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~i 715 (1050)
++++.+++.+|.+...+..++|++. +..++++.+. .++++|+++...++.+...++..|++++.++.++++.+
T Consensus 75 ~lr~~ia~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 147 (371)
T PRK05166 75 ALREAIAARTGVPADRIILGNGSED--LIAVICRAVL-----RPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGF 147 (371)
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHH--HHHHHHHHhc-----CCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCC
Confidence 6788889999987655556666542 2222333321 24578999877655555567889999999999888889
Q ss_pred CHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHH--cCCEEEEeccccccccccCCCC------cccC-c
Q 001579 716 NIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSPG------YIGA-D 785 (1050)
Q Consensus 716 D~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~--~G~~v~vD~A~~~al~gl~~pg------~~Ga-D 785 (1050)
|+++++++++ +++++|++++| |.+|.+. +.+++.++++. .++++++|+++..-..+-..|. +.+. -
T Consensus 148 ~~~~l~~~~~---~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~v 223 (371)
T PRK05166 148 DLDALCAAVA---RAPRMLMFSNPSNPVGSWL-TADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPW 223 (371)
T ss_pred CHHHHHHhhh---cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCE
Confidence 9999999997 57788999999 5789876 45555555443 4889999998532111101111 1111 2
Q ss_pred EEEeCCccccccCCCCCCCcceeeee-cccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 786 v~~~~~hKtf~~P~g~GGPg~G~i~v-~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
|+..++.|+|++ .|.++|++++ ++++.+.+-. . +...+++ ...+. ++.+.+ ..
T Consensus 224 i~i~SfSK~~~l----~GlRiG~~i~~~~~l~~~~~~-~-------------~~~~~~~--~~~q~----~~~~~l--~~ 277 (371)
T PRK05166 224 IVLRTFSKAYGL----AGLRVGYGLVSDPELVGLLDR-V-------------RTPFNVN--GAAQA----AALAAL--DD 277 (371)
T ss_pred EEEeechHhhhc----chhheeeeecCCHHHHHHHHH-h-------------ccCCCCC--HHHHH----HHHHHh--cC
Confidence 566778888864 4789999776 4455443310 0 0011122 11121 111111 12
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCC-CCCC
Q 001579 865 SKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS-WPVP 942 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~-~pv~ 942 (1050)
.+-+++..+....+.+++.+.|++. +.+ . .+.+.+ +.++++ .+..++.+.|.++||.+.... +...
T Consensus 278 ~~~~~~~~~~~~~~r~~l~~~L~~~g~~~-~-p~~g~f---l~~~~~-------~~~~~l~~~l~~~gi~v~p~~~~~~~ 345 (371)
T PRK05166 278 EEHLAKGVALALAERERLKKELAEMGYRI-A-PSRANF---LFFDAR-------RPASAVAEALLRQGVIVKPWKQPGFE 345 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCee-C-CCcCCE---EEEeCC-------CCHHHHHHHHHHCCeEEecCCCCCCC
Confidence 2335555555666778888989875 332 2 222322 345543 356789999999999864332 2246
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 943 GTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 943 ~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
+.+||+++ +.++.++|+++|+.+.
T Consensus 346 ~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 346 TFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred CeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 78999986 5778999999998764
No 403
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=1.1e-12 Score=154.82 Aligned_cols=153 Identities=23% Similarity=0.249 Sum_probs=123.6
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 290 (1050)
.++++.+|++.|.+. +.++.+|+++.++++.++ .. +||+||++...|+.+...+...++..|++++.+|. ++
T Consensus 66 ~~le~~lA~l~g~~~--al~~~SG~~Ai~~al~al-l~--pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~ 140 (427)
T PRK05994 66 AVLEERVAALEGGTA--ALAVASGHAAQFLVFHTL-LQ--PGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPAS 140 (427)
T ss_pred HHHHHHHHHHhCCCc--EEEEcCHHHHHHHHHHHH-hC--CCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 356789999999876 778899998888777665 23 88999999999998888776656678999999875 45
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|-++|+|+++.|. |.+++| ||
T Consensus 141 l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD-~a~a~~~~~~pl~~gaDivv~S~tK~lgg~---~~ 216 (427)
T PRK05994 141 FERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVD-NTLASPYLIRPIEHGADIVVHSLTKFLGGH---GN 216 (427)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCccccccCCccccCCcEEEEcCccccCCC---CC
Confidence 555 7788999999988 78999999999999999999999994 45566666677789999999998 766643 45
Q ss_pred cceEEEEE
Q 001579 368 PHAAFLAT 375 (1050)
Q Consensus 368 P~~G~la~ 375 (1050)
+-+|++..
T Consensus 217 ~~gG~v~~ 224 (427)
T PRK05994 217 SMGGIIVD 224 (427)
T ss_pred cEEEEEEe
Confidence 55666653
No 404
>PRK05939 hypothetical protein; Provisional
Probab=99.53 E-value=1.8e-12 Score=151.54 Aligned_cols=229 Identities=14% Similarity=0.124 Sum_probs=151.2
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH---HHhCCCEEEEEcCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT---AAMCGMKIVSVGTD 710 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~---a~~~G~~vv~V~~d 710 (1050)
..++++.++++.|.+.+ +..++|..|..+++.++. .++++||++...|+.+... +...|++++.++.
T Consensus 49 ~~~lE~~la~leg~~~~-v~~ssG~~Ai~~~l~all--------~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~- 118 (397)
T PRK05939 49 TAALEAKITKMEGGVGT-VCFATGMAAIAAVFLTLL--------RAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA- 118 (397)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHHHHHc--------CCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC-
Confidence 55789999999998764 455677766654444331 2457899988877766542 4568999999986
Q ss_pred CCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEEe
Q 001579 711 AKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHL 789 (1050)
Q Consensus 711 ~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~~ 789 (1050)
.|+++|+++++ ++|++|+++.| |.+|.+. |+++|+++||++|+++++|+++... ....|.++|+|+++.
T Consensus 119 ----~d~e~l~~~l~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~t~a~~--~~~~~~~~gaDivv~ 188 (397)
T PRK05939 119 ----TDVQNVAAAIR---PNTRMVFVETIANPGTQVA-DLAGIGALCRERGLLYVVDNTMTSP--WLFRPKDVGASLVIN 188 (397)
T ss_pred ----CCHHHHHHhCC---CCCeEEEEECCCCCCCCHH-hHHHHHHHHHHcCCEEEEECCcccc--cccCccccCCEEEEe
Confidence 38999999997 78999999998 5789887 8999999999999999999886432 234677889999999
Q ss_pred CCccccccCCCCCCCcceeeeecccccCCCC-CCcccc----CC-CC----CCCCCCCCCCCCCcchhhhHHHHHHHHHH
Q 001579 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVS----TG-GI----PAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1050)
Q Consensus 790 ~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lp-g~~vg~----~~-~~----~~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1050)
++||+|+. .|..+|.+++.+...+... ...... .. +. .+......++...+ + --+|
T Consensus 189 S~sK~~~g----~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-p---------~~a~ 254 (397)
T PRK05939 189 SLSKYIAG----HGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLS-S---------EAAH 254 (397)
T ss_pred cCeecccC----CCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCC-H---------HHHH
Confidence 99999962 2344455544322111100 000000 00 00 00000001111111 1 1234
Q ss_pred HHHHChhhHHHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 860 IAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
+...|-+-|....++..+|+..+++.|+++ -.|.|+|
T Consensus 255 l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~ 294 (397)
T PRK05939 255 RIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPG 294 (397)
T ss_pred HHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 556677778878888889999999999976 2455665
No 405
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.53 E-value=8.6e-13 Score=153.76 Aligned_cols=216 Identities=21% Similarity=0.204 Sum_probs=144.0
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHH---HhCCCEEEEEcCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVGTD 710 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a---~~~G~~vv~V~~d 710 (1050)
..++++.++++.|.+.+ +..++|.+|..+++.++. .++|+||++...|+.+...+ ...|++++.+.
T Consensus 55 ~~~lE~~lA~l~g~~~~-l~~~sG~~Ai~~~l~~ll--------~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~-- 123 (385)
T PRK08574 55 LRPLEEALAKLEGGVDA-LAFNSGMAAISTLFFSLL--------KAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY-- 123 (385)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC--
Confidence 45789999999998765 445778776654444331 24688999988887665543 44688887764
Q ss_pred CCCCCCHHHHHHHHHcCCC-CEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 711 AKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 711 ~~g~iD~e~L~~~i~~~~~-~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+|+++|+++++ + ++++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +....|-++|+|+++
T Consensus 124 ----~d~~~l~~~i~---~~~tklV~ie~p~NPtG~v~-dl~~I~~la~~~gi~livD~t~a~--~~~~~~l~~GaDivv 193 (385)
T PRK08574 124 ----PSTEDIIEAIK---EGRTKLVFIETMTNPTLKVI-DVPEVAKAAKELGAILVVDNTFAT--PLLYRPLRHGADFVV 193 (385)
T ss_pred ----CCHHHHHHhcC---ccCceEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCCc--cccCChhhhCCcEEE
Confidence 46899999997 5 8999999998 5789887 799999999999999999998642 223456678999999
Q ss_pred eCCccccccCCCCCCCcceeeee-cccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v-~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.+++|+|+.| |..-.|.+++ ++.+...+-.. + ...+...+ ++ .+ ++...|-+-
T Consensus 194 ~S~sK~l~g~---~d~~gG~vi~~~~~~~~~~~~~------------~-~~~g~~~~-p~-------~a--~l~l~~l~t 247 (385)
T PRK08574 194 HSLTKYIAGH---NDVVGGVAVAWSGEFLEELWEW------------R-RRLGTIMQ-PF-------EA--YLVLRGLKT 247 (385)
T ss_pred eeCceeecCC---CCceeEEEEECcHHHHHHHHHH------------H-HhcCCCCC-HH-------HH--HHHHcccCc
Confidence 9999998522 1112464444 44443332100 0 00111111 11 12 233344455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 868 LTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
+....++..+|+.++++.|+++ -.|.|+|
T Consensus 248 L~~R~~~~~~na~~la~~L~~~p~v~~V~yP~ 279 (385)
T PRK08574 248 LEVRFERQCRNAMAIAEFLSEHPKVAEVYYPG 279 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCEEECCC
Confidence 6666777788999999999875 2456665
No 406
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.53 E-value=1.2e-12 Score=153.54 Aligned_cols=212 Identities=16% Similarity=0.164 Sum_probs=148.9
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 290 (1050)
.++++.+|++.|.+. ..++.+|++++..+++++ .. +||+|+++...|+.+...++..++..|++++.++. ++
T Consensus 63 ~~Le~~lA~l~g~~~--~v~~~sG~~Ai~~~l~al-l~--pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~ 137 (405)
T PRK08776 63 DLLGEALAELEGGAG--GVITATGMGAINLVLNAL-LQ--PGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRS 137 (405)
T ss_pred HHHHHHHHHHhCCCc--eEEEcCHHHHHHHHHHHH-hC--CCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHH
Confidence 346689999999754 567888887776666554 23 89999999999998887777666678899988865 45
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+|+++.|. |.|++| |+
T Consensus 138 l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD-~a~a~~~~~~pl~~gaDivv~S~tK~l~g~---~~ 213 (405)
T PRK08776 138 LADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVD-NTFLSPALQKPLEFGADLVLHSTTKYINGH---SD 213 (405)
T ss_pred HHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE-CCCcccccCCcccccCCEEEecCceeecCC---CC
Confidence 655 7778999999998 88999999999999999999999994 44455555567789999999998 777644 22
Q ss_pred cceEEEEEe-hhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 368 P~~G~la~~-~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
-.+|.+.++ +++.+++- ..+..-| ++ ..++ ..|+...|.+-++.+
T Consensus 214 ~~~G~vv~~~~~l~~~l~-------------------------~~~~~~g---~~-~s~~-----~a~l~~~gl~tl~~r 259 (405)
T PRK08776 214 VVGGAVVARDAELHQQLV-------------------------WWANALG---LT-GSPF-----DAFLTLRGLRTLDAR 259 (405)
T ss_pred ceEEEEEeCCHHHHHHHH-------------------------HHHHhcC---CC-CCHH-----HHHHHHhhhCcHHHH
Confidence 224666554 44433320 0000001 11 1122 112234555566777
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.++..+++..+++.|++...++
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~ 281 (405)
T PRK08776 260 LRVHQENADAIAALLDGHAAVN 281 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCee
Confidence 7888999999999999875454
No 407
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.53 E-value=6.4e-13 Score=155.09 Aligned_cols=214 Identities=21% Similarity=0.256 Sum_probs=142.9
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-H---HhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-A---AMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~-a---~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+... ..++|+.+..+++.++ . .++++||++...|+..... . ...|++++.++.
T Consensus 63 ~~~Le~~lA~~~g~~~~i-~~~sG~~Ai~~~l~al---l-----~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 63 RTALEEQLAALEGGAYGR-AFSSGMAATDCLLRAV---L-----RPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred HHHHHHHHHHHhCCCceE-EeCCHHHHHHHHHHHH---h-----CCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 557899999999988653 3456766554444333 1 2457899988766533222 2 235888887775
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++|+++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. +....|...|+|+++
T Consensus 134 -----~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~-dl~~I~~la~~~gi~lIvD~a~a~--~~~~~p~~~gaDivv 202 (388)
T PRK07811 134 -----SDLDAVRAAIT---PRTKLIWVETPTNPLLSIT-DIAALAELAHDAGAKVVVDNTFAS--PYLQQPLALGADVVV 202 (388)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCcceec-CHHHHHHHHHHcCCEEEEECCCCc--cccCCchhhCCcEEE
Confidence 48999999997 689999999995 689887 899999999999999999988542 223456678999999
Q ss_pred eCCccccccCCCCCCCc---ceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 789 LNLHKTFCIPHGGGGPG---MGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg---~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
++++|+|+ ||+ +|++++++ .+...+.-. + ..++...+ +. .+| +...+
T Consensus 203 ~S~sK~l~------g~~~~~gG~vv~~~~~l~~~~~~~------------~-~~~g~~~s-~~-------~a~--l~~~~ 253 (388)
T PRK07811 203 HSTTKYIG------GHSDVVGGALVTNDEELDEAFAFL------------Q-NGAGAVPG-PF-------DAY--LTLRG 253 (388)
T ss_pred ecCceeec------CCCCcEEEEEEECCHHHHHHHHHH------------H-HhcCCCCC-HH-------HHH--HHHhc
Confidence 99999995 443 57777764 443332100 0 00111111 11 122 23333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccC---CeeecC
Q 001579 865 SKGLTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~~~---~v~~~g 896 (1050)
-+-+....++...|+..+++.|+++. .|.|++
T Consensus 254 L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~ 288 (388)
T PRK07811 254 LKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPG 288 (388)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCC
Confidence 34455566677789999999998762 345655
No 408
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=7e-13 Score=156.36 Aligned_cols=144 Identities=17% Similarity=0.138 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEc
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 708 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~ 708 (1050)
...++++.++++.|.+.+ +..++|+.|...++.++ . . ++|+||++...|+..... +...|+++++++
T Consensus 65 ~~~~le~~lA~l~g~~~a-v~~sSGt~Al~~al~~l---l-~----~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 135 (433)
T PRK08134 65 TVAVLEERVAALEGGVGA-IATASGQAALHLAIATL---M-G----AGSHIVASSALYGGSHNLLHYTLRRFGIETTFVK 135 (433)
T ss_pred HHHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHHHHH---h-C----CCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEEC
Confidence 366899999999998765 56778887665444433 1 1 457899888766543222 234799999998
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEE
Q 001579 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~ 787 (1050)
.+ |+++|+++|+ ++|++|+++.| |.+|.+. |+++|+++||++|+++++|+++..+. +..|-++|+|++
T Consensus 136 ~~-----d~~~l~~~i~---~~TklV~~e~~~np~g~v~-Di~~I~~la~~~gi~livD~t~a~~~--~~~pl~~GaD~v 204 (433)
T PRK08134 136 PG-----DIDGWRAAIR---PNTRLLFGETLGNPGLEVL-DIPTVAAIAHEAGVPLLVDSTFTTPY--LLRPFEHGADLV 204 (433)
T ss_pred CC-----CHHHHHHhcC---CCCeEEEEECCCcccCccc-CHHHHHHHHHHcCCEEEEECCCcccc--cCCchhcCCCEE
Confidence 74 8999999997 89999999998 4688887 89999999999999999999865433 356778999999
Q ss_pred EeCCccccc
Q 001579 788 HLNLHKTFC 796 (1050)
Q Consensus 788 ~~~~hKtf~ 796 (1050)
+.++||+++
T Consensus 205 v~S~tK~l~ 213 (433)
T PRK08134 205 YHSATKFLG 213 (433)
T ss_pred EeccccccC
Confidence 999999984
No 409
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.53 E-value=1.5e-12 Score=146.85 Aligned_cols=352 Identities=15% Similarity=0.206 Sum_probs=225.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcCCCccc--cccCCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHH
Q 001579 139 MKFSKFDEGLTESQMIEHMQKLASMNKVYK--SFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNF 216 (1050)
Q Consensus 139 ~~lp~~~~~~sE~e~~~~~~~la~~n~~~~--~~lG~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~ 216 (1050)
..|| ..+++..++++.++....-+-.+. -..|..|+. -|... .+.. +-|.-|+|-.+.+.++..+.-.+.
T Consensus 54 ~~lP--~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~--~~~~~--~l~~--~~~~k~N~l~~d~fp~~~~~e~~~ 125 (491)
T KOG1383|consen 54 FTLP--SKGLPKDAVLELINDELMLDGNPRLGLASGVVYWG--EPELD--KLIM--EAYNKFNPLHPDEFPVVRKLEAEC 125 (491)
T ss_pred ecCC--CCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecC--Ccchh--hHHH--HHHhhcCccCccccchhHHHHHHH
Confidence 4577 589999999999988765543322 133555544 22222 1221 113334788888889998988999
Q ss_pred HHHHHHhcCCCCc-ceeEecchHHHHHHHHHHhhhhcC-----CCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch-
Q 001579 217 QTMIADLTGLPMS-NASLLDEGTAAAEAMAMCNNIQKG-----KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK- 289 (1050)
Q Consensus 217 q~~ia~L~G~~~a-nasl~d~~Taa~eA~~la~~~~~~-----~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~- 289 (1050)
-.|+|.|++.+.+ ....+.|+|.++.++....+..++ ....++++.++|.+ |+.+++.++++++.++++
T Consensus 126 Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a----~eK~a~yf~v~l~~V~~~~ 201 (491)
T KOG1383|consen 126 VNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAA----FEKAARYFEVELREVPLDE 201 (491)
T ss_pred HHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHH----HHHHHhhEEEEEEeeeccc
Confidence 9999999998743 555667777543333333221111 22346666555544 455567789999999775
Q ss_pred -----h---hhc-cCCCeeEEEEEcCC-CCeeEccHHHHHHHHHh-CCcEEEEEecCccccC---CCCCCcccc-----e
Q 001579 290 -----D---IDY-KSGDVCGVLVQYPG-TEGEVLDYGDFIKNAHA-NGVKVVMATDLLALTI---LKPPGELGA-----D 350 (1050)
Q Consensus 290 -----~---l~~-l~~~t~~V~v~~pn-~~G~i~di~~I~~~ah~-~galliV~a~~~alg~---l~~pg~~Ga-----D 350 (1050)
| +.+ ++++|.+|+...|+ .+|.++|+++|.++.-+ ++..++|++.+-++-. ...+.+||. -
T Consensus 202 ~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~ 281 (491)
T KOG1383|consen 202 GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVT 281 (491)
T ss_pred cceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCce
Confidence 2 233 78999999999996 48999999999999999 9999999664333322 112334543 2
Q ss_pred EEEecCccccccCCCCCcceE-EEEEehhhhhcCCCcEEeEeecCCCC--cceEEecccccccccccccCCCccchhHHH
Q 001579 351 IVVGSAQRFGVPMGYGGPHAA-FLATSQEYKRMMPGRIVGVSIDSSGK--PALRVAMQTREQHIRRDKATSNICTAQALL 427 (1050)
Q Consensus 351 ivvgs~k~~g~P~~~GGP~~G-~la~~~~~~r~lpgrivG~s~d~~g~--~~~~l~lqtreq~irRekaTsnict~~~l~ 427 (1050)
-.-.+++++|.-+ +|.+ .++..+++ +|-.++-. .|-.|. ..+.++.+ ++.++
T Consensus 282 Sisa~~HKYGl~~----~G~~~vl~r~k~~---~~~q~~~~-~~w~Gg~y~s~TlngS---------R~g~~-------- 336 (491)
T KOG1383|consen 282 SISADGHKYGLAP----AGSSWVLYRNKEL---LPHQLFFH-TDWLGGIYASPTLNGS---------RPGSQ-------- 336 (491)
T ss_pred eEeeccceeeeee----cCcEEEEEccccc---ccceEEEe-ccccCccccCcccccC---------CcccH--------
Confidence 2233346665421 2233 34433333 23332221 121121 12233321 22222
Q ss_pred HHHHHHH--HHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeeee-
Q 001579 428 ANMAAMY--AVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVV- 502 (1050)
Q Consensus 428 a~~aa~y--~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~i~~~L~~~GI~~~~~- 502 (1050)
+++.| +..+|.+|+++..++|.+.+++|+++|++++++.++++|...-+.+.... ..++.+.|+++||++..+
T Consensus 337 --va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq 414 (491)
T KOG1383|consen 337 --VAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQ 414 (491)
T ss_pred --HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccC
Confidence 23333 47899999999999999999999999999966999876543223333333 679999999999999876
Q ss_pred cCCeEEEEeccCCCHHHH-HHHHHHHhC
Q 001579 503 DSNTVTASFDETTTLEDV-DKLFIVFAG 529 (1050)
Q Consensus 503 ~~~~lris~~e~~t~edI-d~lv~~l~~ 529 (1050)
.+..+.+|++-.++.+++ |+|+..++.
T Consensus 415 ~P~a~Hi~vt~~~~~~~~A~~~v~Di~~ 442 (491)
T KOG1383|consen 415 FPAAIHICVTRVHAREDVADRFVADIRK 442 (491)
T ss_pred CCCceEEEEEeeeccHHHHHHHHHHHHH
Confidence 367899999999999986 777777763
No 410
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.53 E-value=1.7e-12 Score=150.00 Aligned_cols=282 Identities=12% Similarity=0.114 Sum_probs=170.8
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC-
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK- 712 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~- 712 (1050)
..++++.+++.+|.+...+..+.|++. +..++++.+ . +++ ++++...+..+...+++.|.+++.++++++
T Consensus 57 ~~~lr~~ia~~~~~~~~~i~it~Ga~~--~l~~~~~~l--~----~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 127 (356)
T PRK08056 57 YRHLHQALARHHQVPASWILAGNGETE--SIFAVVSGL--K----PRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREAD 127 (356)
T ss_pred HHHHHHHHHHHhCcChhhEEECCCHHH--HHHHHHHHh--C----CCC-EEEeCCCcHHHHHHHHHcCCeEEEEeccccc
Confidence 357888899999988655555666542 222334432 1 234 454444333333457889999999998754
Q ss_pred C-CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc--cCCC-CcccC
Q 001579 713 G-NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG--LTSP-GYIGA 784 (1050)
Q Consensus 713 g-~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~g--l~~p-g~~Ga 784 (1050)
+ .+| +++.+.+. +++++|++++| |.+|.+. +.+++|+++|+++|+++++|+++..- ..+ +..+ ....-
T Consensus 128 ~~~~~-~~~~~~~~---~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~ 203 (356)
T PRK08056 128 GWQLT-DAILEALT---PDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPH 203 (356)
T ss_pred CCCcc-HHHHHhcc---CCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCC
Confidence 3 445 45555664 78889999999 5789875 13889999999999999999985210 011 0011 12345
Q ss_pred cEEEeCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHH
Q 001579 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1050)
++++.+++|+|++| |.++|++++. +++...+-.. ....+++ ..++ ++....+
T Consensus 204 ~i~~~S~SK~~~~~----G~RiG~~v~~~~~~~~~l~~~--------------~~~~~~~--~~~~-------~~a~~~l 256 (356)
T PRK08056 204 LWVLRSLTKFYAIP----GLRLGYLVNSDDAAVARMRRQ--------------QMPWSIN--AFAA-------LAGEVIL 256 (356)
T ss_pred EEEEEechhhccCc----chhheeeecCCHHHHHHHHHh--------------CCCCchh--HHHH-------HHHHHHh
Confidence 67889999999755 7889999874 3443322100 0001111 1111 1111222
Q ss_pred -ChhhHHHHHHHHHHHHHHHHHHHhccCCe-eecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC
Q 001579 864 -GSKGLTEASKIAILNANYMAKRLEKHYPI-LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP 940 (1050)
Q Consensus 864 -G~eGl~~~a~~~~~~a~yl~~~L~~~~~v-~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~-~~~p 940 (1050)
+.+-+++..+....+.+++.+.|+++..+ .++ +.+.+ +.+++. .+..++++.|.++||.+.. ..|+
T Consensus 257 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~---~~~~~~-------~~~~~~~~~l~~~gI~v~~~~~f~ 325 (356)
T PRK08056 257 QDRAYQQATWQWLAEEGARFYQALCALPLLTVWP-GRANY---LFLRCE-------RPDIDLQRALLTQRILIRSCANYP 325 (356)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcC-CCCcE---EEEEcC-------CChHHHHHHHHHCCeEEEECCCCC
Confidence 23334444555567778888888765222 122 22222 345543 1356899999999998643 2343
Q ss_pred --CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 941 --VPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 941 --v~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
..+.+||++. +.++.++|+++|.+++
T Consensus 326 ~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 326 GLDSRYYRVAIR---SAAENERLLAALRNVL 353 (356)
T ss_pred CCCCCEEEEEEc---CHHHHHHHHHHHHHHH
Confidence 2368999985 6789999999998764
No 411
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.53 E-value=3.2e-12 Score=148.08 Aligned_cols=264 Identities=15% Similarity=0.090 Sum_probs=175.1
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc-----
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL----- 288 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~----- 288 (1050)
.++++.+|+++|.++.++.+++|++.+...+..++ . ++||+|++++..|+.+...+ +..|++++.++.
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l-~--~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~ 142 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEILELLARAY-L--GPGDEVIYSEHGFAVYPIAA----QAVGAKPVEVPAKDYGH 142 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh-c--CCCCEEEEecCCHHHHHHHH----HHcCCeEEEecccCCCC
Confidence 46778999999998888988888887665544443 2 27899999998887665543 246888887754
Q ss_pred --hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhC--CcEEEEEecCccccCCCC---C----Ccccc-eEEEe
Q 001579 289 --KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN--GVKVVMATDLLALTILKP---P----GELGA-DIVVG 354 (1050)
Q Consensus 289 --~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~--galliV~a~~~alg~l~~---p----g~~Ga-Divvg 354 (1050)
+++++ +++++++|++.+| |.+|.+.|.++|.++++.. |++++++. ......... + .+.+- .|+++
T Consensus 143 ~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De-~y~~~~~~~~~~~~~~~~~~~~~~i~~~ 221 (367)
T PRK02731 143 DLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDE-AYAEYVRRKDYEDGLELVAKFPNVVVTR 221 (367)
T ss_pred CHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEEC-cHHHhccCcCcccHHHHHhhcCCEEEEe
Confidence 34554 6678899999988 7899999999999999875 88988843 222111100 0 01112 34556
Q ss_pred cC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH
Q 001579 355 SA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1050)
Q Consensus 355 s~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~ 433 (1050)
|. |.||. +|...||+++++++++.+.. -+.+.++++ . +..++.
T Consensus 222 S~SK~~g~----~G~RiG~l~~~~~~~~~l~~----------------------------~~~~~~~~~--~--~~~~a~ 265 (367)
T PRK02731 222 TFSKAYGL----AGLRVGYGIAPPEIIDALNR----------------------------VRQPFNVNS--L--ALAAAV 265 (367)
T ss_pred eehHhhcC----cccceeeeeCCHHHHHHHHH----------------------------ccCCCCCCH--H--HHHHHH
Confidence 65 77753 34456999998887765410 001112221 1 112221
Q ss_pred HHHHhC-cccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeeec----CC
Q 001579 434 YAVYHG-PEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD----SN 505 (1050)
Q Consensus 434 y~~~~g-~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~i~~~L~~~GI~~~~~~----~~ 505 (1050)
.++- .+-++++.+...++.+++.+.|++.| +++..+ ...-+.+.++. +.++.++|.++||.++... ++
T Consensus 266 --~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~-~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~ 341 (367)
T PRK02731 266 --AALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYIPS-VGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPN 341 (367)
T ss_pred --HHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccCCC-CceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCCCCC
Confidence 1222 23367777888888899999999887 776531 12224455532 7899999999999887642 46
Q ss_pred eEEEEeccCCCHHHHHHHHHHHh
Q 001579 506 TVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 506 ~lris~~e~~t~edId~lv~~l~ 528 (1050)
.+|+|++ +.+|+++|+++|+
T Consensus 342 ~iRis~~---~~~e~~~l~~aL~ 361 (367)
T PRK02731 342 ALRITIG---TEEENRRFLAALK 361 (367)
T ss_pred eEEEecC---CHHHHHHHHHHHH
Confidence 8999985 7899999999986
No 412
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.53 E-value=2.3e-12 Score=150.12 Aligned_cols=272 Identities=15% Similarity=0.112 Sum_probs=180.0
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcC---chh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~---~~~ 290 (1050)
..+++.+|++.|.+ .+.++.+|++++..+++++ . ++||+|++++..|+++...+...+...++++..++ +++
T Consensus 55 ~~L~~~lA~l~g~~--~~i~~~sg~~Ai~~~l~~l-~--~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~ 129 (386)
T PRK08045 55 DVVQRALAELEGGA--GAVLTNTGMSAIHLVTTVF-L--KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQA 129 (386)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHH-c--CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHH
Confidence 34668999999965 4888899998877766654 2 38999999999999888877766666677887765 355
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ +++++++|++.+| |.+|.+.|+++|.++||++|++++|+ +..+.+....|-++|+|+++.|. |++++|- +
T Consensus 130 l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivD-eay~~~~~~~pl~~gaDivv~S~tK~l~G~~---d 205 (386)
T PRK08045 130 LRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGHS---D 205 (386)
T ss_pred HHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCCccccCCchhhCCCEEEeecceeccCCC---C
Confidence 655 7778999999998 68999999999999999999999994 44555555667789999999998 7775331 1
Q ss_pred cceEEEEEe-hhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 368 P~~G~la~~-~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
--+|++.++ +++.+++ ++-+....+|. .++ ..|+...|-+-+...
T Consensus 206 ~~~G~vi~~~~~~~~~l----------------------------~~~~~~~g~~~-~p~-----~~~l~~rgl~tl~~R 251 (386)
T PRK08045 206 VVAGVVIAKDPDVVTEL----------------------------AWWANNIGVTG-GAF-----DSYLLLRGLRTLVPR 251 (386)
T ss_pred ceeEEEEeCcHHHHHHH----------------------------HHHHHhcCCCC-CHH-----HHHHHHhhhccHHHH
Confidence 114666553 3433322 00000011121 111 123455555667778
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE-EcCC-----C-----------CccEEEEecCC----HHHHHHHHHHc--Cceee---
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE-VQGL-----P-----------FFDTVKVKCAD----AHAIASAAYKI--EMNLR--- 500 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~-l~~~-----~-----------~~~~v~i~~~~----~~~i~~~L~~~--GI~~~--- 500 (1050)
.++..+++..+++.|++.+.++ |.-+ + +..-|+|.+++ +..+.+.|.-. +..+.
T Consensus 252 ~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~ 331 (386)
T PRK08045 252 MELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVE 331 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccceeEeccCCCCc
Confidence 8889999999999999886454 3211 1 11246676654 34555555422 22110
Q ss_pred -----e-----------------ecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 501 -----V-----------------VDSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 501 -----~-----------------~~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+ +.++.||+|++.-+.++=|+.|.++|.
T Consensus 332 sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 381 (386)
T PRK08045 332 SLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFR 381 (386)
T ss_pred eeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHH
Confidence 0 124689999987665555566666664
No 413
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=2.9e-12 Score=151.06 Aligned_cols=230 Identities=17% Similarity=0.178 Sum_probs=147.6
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|+.|..++++++. . ++++||++...|+..... +...|++++.++
T Consensus 71 ~~~Le~~lA~l~g~~~a-v~~sSG~aAi~~al~all----~----~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 71 QDVVEQRIAALEGGVAA-LLLASGQAAETFAILNLA----G----AGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh----C----CCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 44788999999999875 556688777655544331 2 457888887766543322 334788888885
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+. .|+++++++++ ++|++|+++.| |.+|.+. |+++|+++||++|++++||+++.. +.+..|-++|+|+++
T Consensus 141 d~---~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~-Dl~~I~~la~~~gi~liVD~t~a~--~~~~~pl~~GaDivv 211 (436)
T PRK07812 141 DP---DDLDAWRAAVR---PNTKAFFAETISNPQIDVL-DIPGVAEVAHEAGVPLIVDNTIAT--PYLIRPLEHGADIVV 211 (436)
T ss_pred CC---CCHHHHHHhCC---CCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCcc--cccCCchhcCCCEEE
Confidence 22 38999999987 78999999998 5789987 899999999999999999998643 233567788999999
Q ss_pred eCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCC--CC-----CC--------C---CCCCCCCCcchhhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGI--PA-----PE--------K---SQPLGTIAAAPWGS 849 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~--~~-----~~--------~---~~~t~~i~sa~~g~ 849 (1050)
.++||+++ +|| + .+|.+++. ......-+....-.+.+. .. .+ + ....+...+ +
T Consensus 212 ~S~tK~lg-g~G--~-~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~-p--- 283 (436)
T PRK07812 212 HSATKYLG-GHG--T-AIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAIS-P--- 283 (436)
T ss_pred EecccccC-CCC--C-eEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCC-H---
Confidence 99999985 221 1 23444443 221100000000000000 00 00 0 000111111 1
Q ss_pred HHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
--+|+.+.|-+.|....++..++|..+++.|+++ -+|.|+|
T Consensus 284 ------~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPg 327 (436)
T PRK07812 284 ------FNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAG 327 (436)
T ss_pred ------HHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 1234566677778888888899999999999986 2455654
No 414
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.53 E-value=2.9e-13 Score=158.05 Aligned_cols=256 Identities=21% Similarity=0.243 Sum_probs=167.5
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|.+|..++++++. . ++++||++...|+.... .+...|++++.++.
T Consensus 63 ~~~le~~la~l~g~~~~-v~~ssG~~Ai~~al~al~----~----~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 63 VTMFQERLAALEGAEAC-VATASGMAAILAVVMALL----Q----AGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh----C----CCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 56799999999998865 455677776654444331 2 45789998877765433 24568999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+ |+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|.++.. ..+..|.++|+|+++
T Consensus 134 ~-----d~~~l~~~i~---~~tklV~ie~p~NptG~v~-dl~~I~~la~~~gi~livD~t~~~--~~~~~pl~~g~Divv 202 (390)
T PRK08133 134 T-----DLDAWRAAVR---PNTKLFFLETPSNPLTELA-DIAALAEIAHAAGALLVVDNCFCT--PALQQPLKLGADVVI 202 (390)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCCcC-CHHHHHHHHHHcCCEEEEECCCcc--cccCCchhhCCcEEE
Confidence 3 8999999996 78999999999 5689987 899999999999999999987532 233567778999999
Q ss_pred eCCccccccCCCCCCCcc-eeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGM-GPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~-G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.++||+|+. .|..+ |+++.++++...+.. .. ...+...+ ++ .+|. ...|-+.
T Consensus 203 ~S~sK~~~g----~g~~~GG~vv~~~~~~~~~~~-~~------------~~~g~~~~-~~-------~a~~--~l~gl~t 255 (390)
T PRK08133 203 HSATKYLDG----QGRVLGGAVVGSKELMEEVFG-FL------------RTAGPTLS-PF-------NAWV--FLKGLET 255 (390)
T ss_pred eecceeecC----CcceEeEEEEcCHHHHHHHHH-HH------------HHhCCCCC-HH-------HHHH--HHcccch
Confidence 999999852 23333 677766554322210 00 00011111 11 1333 3334456
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCe---eecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCE
Q 001579 868 LTEASKIAILNANYMAKRLEKHYPI---LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGT 944 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~~~v---~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~ 944 (1050)
+....++...++..+++.|++...| .|++ +. .....+++++.+ .|+ ++-
T Consensus 256 l~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~---------------l~---~~p~~~~~~~~~-~g~---------g~~ 307 (390)
T PRK08133 256 LSLRMEAHSANALALAEWLEAHPGVERVFYPG---------------LP---SHPQHELAKRQQ-KGG---------GAI 307 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCC---------------CC---CCccHHHHHHhC-CCC---------ceE
Confidence 7767777778999999999876333 2221 10 112356666643 221 233
Q ss_pred EEEEcCCCCCHHHHHHHHHHHH
Q 001579 945 LMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 945 lrI~~te~~t~eeid~fv~aL~ 966 (1050)
+-|.+ ..++++..+|++.|+
T Consensus 308 ~s~~l--~~~~~~~~~f~~~l~ 327 (390)
T PRK08133 308 VSFEV--KGGREAAWRVIDATR 327 (390)
T ss_pred EEEEE--cCCHHHHHHHHHhCC
Confidence 44443 235777888888876
No 415
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.53 E-value=1.8e-12 Score=153.68 Aligned_cols=252 Identities=13% Similarity=0.101 Sum_probs=161.8
Q ss_pred CCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEE-cC-CCccccc--cCHHHHHH
Q 001579 679 HRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVT-YP-STHGVYE--EGIDEICK 754 (1050)
Q Consensus 679 ~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt-~P-n~~Gv~~--~di~eI~~ 754 (1050)
++|.|++++..++.+...+++.|++++.|+++++| +|+++|+++++ +++++++++ +| |.+|.+- +..++|.+
T Consensus 164 pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~---~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~ 239 (431)
T PRK15481 164 PGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEG-MQPEKLERALA---QGARAVILTPRAHNPTGCSLSARRAAALRN 239 (431)
T ss_pred CCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCCC-CCHHHHHHHHh---cCCCEEEECCCCCCCCCccCCHHHHHHHHH
Confidence 45789999987766777789999999999997766 89999999997 567888886 78 5789875 23569999
Q ss_pred HHHHc-CCEEEEeccccccc-cccCCC--CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCC
Q 001579 755 IIHDN-GGQVYMDGANMNAQ-VGLTSP--GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI 830 (1050)
Q Consensus 755 la~~~-G~~v~vD~A~~~al-~gl~~p--g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~ 830 (1050)
+|+++ +++++.|.++..-. .+...+ ....--++..++.|+|+ | |.++|++++.+++...+...
T Consensus 240 la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~----GlRiG~~i~~~~~~~~~~~~-------- 306 (431)
T PRK15481 240 LLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-P----DLRLAFVASDSATSARLRLR-------- 306 (431)
T ss_pred HHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-C----CceeEEEeCCHHHHHHHHHH--------
Confidence 99999 99999998753211 111111 11112266778889986 5 67899999887665443100
Q ss_pred CCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHCh--hhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEE
Q 001579 831 PAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS--KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIV 907 (1050)
Q Consensus 831 ~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~--eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~ 907 (1050)
......+++ ...+ .++..++. -|. +-+++..+....+.+++.+.|++. +.+.. +.+..+ +.+
T Consensus 307 ----~~~~~~~~s--~~~q----~a~~~~l~-~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~~~~~~--p~gg~f--~~~ 371 (431)
T PRK15481 307 ----LNSGTQWVS--HLLQ----DLVYACLT-DPEYQARLAQARLFYAQRRQKLARALQQYGIAIPS--PGDGLN--LWL 371 (431)
T ss_pred ----HhccccCCC--HHHH----HHHHHHHh-CccHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc--CCCeEE--EEE
Confidence 000001111 1111 11222222 121 124455566667778888888875 33222 222222 455
Q ss_pred ecccccccCCCCHHHHHHHHHHCCcccCC-CCCCC---CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 908 DLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPV---PGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 908 ~~~~~~~~~g~~~~~vakrL~d~Gi~~~~-~~~pv---~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
+++ .+..+++++|.++|+.+.. ..|.. .+++||++... +.++++++++.|.+++.
T Consensus 372 ~l~-------~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 372 PLD-------TDSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLSTL-NDAEINRLAADLHQALN 430 (431)
T ss_pred ECC-------CCHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCCC-ChHHHHHHHHHHHHHhc
Confidence 654 1457899999999998643 33422 35799999763 58899999999987753
No 416
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.53 E-value=2.6e-12 Score=137.89 Aligned_cols=308 Identities=16% Similarity=0.158 Sum_probs=201.7
Q ss_pred HHHHHHHHHHHHHHhhCCCe--eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCE
Q 001579 630 YQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMK 703 (1050)
Q Consensus 630 ~~~~i~el~~~lael~G~d~--~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~ 703 (1050)
..|+++++.+-+..+|.... ..+.+++|..|-++++.-.. .++|+||+-.. |+... .++..|++
T Consensus 48 ~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~l--------ePgd~vLv~~~--G~wg~ra~D~~~r~ga~ 117 (385)
T KOG2862|consen 48 FVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLL--------EPGDNVLVVST--GTWGQRAADCARRYGAE 117 (385)
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhc--------CCCCeEEEEEe--chHHHHHHHHHHhhCce
Confidence 34678888888888887664 24567788777776653221 25577776433 34332 25678999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccC-CCCc
Q 001579 704 IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SPGY 781 (1050)
Q Consensus 704 vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~-~pg~ 781 (1050)
|..|+.+....+.++++++++.+|+ ..+|+|+.- +.+|+..+-+..+.++||+|+++++||++ .++++.. .-.+
T Consensus 118 V~~v~~~~G~~~~le~i~~~lsqh~--p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~V--aSlggt~F~mDe 193 (385)
T KOG2862|consen 118 VDVVEADIGQAVPLEEITEKLSQHK--PKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTV--ASLGGTEFEMDE 193 (385)
T ss_pred eeEEecCcccCccHHHHHHHHHhcC--CceEEEEecCccccccchHHHHHHHHhhcCCeEEEEech--hhcCCccceehh
Confidence 9999887777899999999999765 456777776 46899993377788999999999999986 3455532 2357
Q ss_pred ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCC---ccccCCCC----------CCCCCCCCCCCCCcchhh
Q 001579 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSH---PVVSTGGI----------PAPEKSQPLGTIAAAPWG 848 (1050)
Q Consensus 782 ~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~---~vg~~~~~----------~~~~~~~~t~~i~sa~~g 848 (1050)
||.|++-....|.++.| ||+++|+.++.....+..+ .+....|. ++.+.-..|.++..
T Consensus 194 wgVDvaytgSQKaL~aP-----~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~l---- 264 (385)
T KOG2862|consen 194 WGVDVAYTGSQKALGAP-----AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQL---- 264 (385)
T ss_pred hcccEEEecchhhcCCC-----CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHH----
Confidence 99999988889999644 6889999886544333211 11000010 00001111222221
Q ss_pred hHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCC--CccceeEEEecccccccCCCCHHHHHH
Q 001579 849 SALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVN--GTVAHEFIVDLRGLKNTAGIEPEDVAK 925 (1050)
Q Consensus 849 ~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~--g~~~~e~i~~~~~~~~~~g~~~~~vak 925 (1050)
+-.--+.++.+-++|+.+..+++.+++++++..|+++ ++.....+. .+..+. +.++ .+++..||+.
T Consensus 265 ----ly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvtt--v~vp-----~gvDw~dVv~ 333 (385)
T KOG2862|consen 265 ----LYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTT--VKVP-----YGVDWKDVVA 333 (385)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCccee--eecC-----CCCCHHHHHH
Confidence 1112345666778999999999999999999999985 443211110 122222 2222 5789999999
Q ss_pred HHHHC-CcccCCCCCC-CCCEEEEEcCCC-CCHHHHHHHHHHHHHHHHH
Q 001579 926 RLMDY-GFHGPTMSWP-VPGTLMIEPTES-ESKEELDRYCDALISIREE 971 (1050)
Q Consensus 926 rL~d~-Gi~~~~~~~p-v~~~lrI~~te~-~t~eeid~fv~aL~~i~~e 971 (1050)
+++++ ++.+...--| ++..+||..+-. -+.|-||+.++.|++.+.+
T Consensus 334 ~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 334 YAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred HHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 99876 5555432223 356789887654 3558899999999887765
No 417
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.53 E-value=1.4e-12 Score=154.26 Aligned_cols=322 Identities=15% Similarity=0.215 Sum_probs=190.1
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhh-CCCeeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTIT-GFDSFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~-G~d~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..||++..++..+...+... . ...+.+. +...++.++|++++ +.+.+ +..++|++++++++.+++.
T Consensus 62 ~~lGh~~p~i~~a~~~~~~~-~-~~~~~~~----------~~~~~la~~L~~~~~~~~~v-~~~~sGseA~e~Aik~a~~ 128 (426)
T PRK00062 62 MILGHAHPEVVEAVIEAAEK-G-LSFGAPT----------ELEVELAELVIELVPSIEMV-RMVNSGTEATMSAIRLARG 128 (426)
T ss_pred hhcCCCCHHHHHHHHHHHHh-C-CcCCCCC----------HHHHHHHHHHHHhCCCCCEE-EEecCHHHHHHHHHHHHHH
Confidence 35677776666555544322 1 1111111 22347888888887 45544 5679999999988888886
Q ss_pred HHHhcCCCCCCEEE-EcCCCCCccHHHHHhCC-------------CEE----EEEcCCCCCCCCHHHHHHHHHcCCCCEE
Q 001579 671 YHKARGDHHRNVCI-IPVSAHGTNPATAAMCG-------------MKI----VSVGTDAKGNINIEELRKAAEANRDNLS 732 (1050)
Q Consensus 671 y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G-------------~~v----v~V~~d~~g~iD~e~L~~~i~~~~~~ta 732 (1050)
| .| |++|| ...++||.........| ... ..+.+. ..|+++|++.++++.++++
T Consensus 129 ~---~g---~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~i~~~~~~~a 199 (426)
T PRK00062 129 Y---TG---RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP---YNDLEAVEELFEEYGDEIA 199 (426)
T ss_pred H---hC---CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC---CCCHHHHHHHHHhCCCcEE
Confidence 5 22 34555 56678997644322211 100 011111 1389999999976667888
Q ss_pred EEEEEc-CCCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCC------ccc--CcEEEeCCccccccCCC
Q 001579 733 TLMVTY-PSTHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------YIG--ADVCHLNLHKTFCIPHG 800 (1050)
Q Consensus 733 aV~vt~-Pn~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg------~~G--aDv~~~~~hKtf~~P~g 800 (1050)
+|+++. ++..|.+.+ .+++|.++|++||+++++|.++. |+ +-| .+| +|+++ +.|.|+
T Consensus 200 aiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~----G~-r~g~~~~~~~~~~~pDi~~--~gK~l~---- 268 (426)
T PRK00062 200 AVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT----GF-RVALGGAQGYYGVTPDLTT--LGKIIG---- 268 (426)
T ss_pred EEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh----cc-ccCCccHHHHhCCCcchHh--hhhHhh----
Confidence 888883 466787751 28999999999999999999853 33 222 123 56644 368774
Q ss_pred CCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHH
Q 001579 801 GGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNAN 880 (1050)
Q Consensus 801 ~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~ 880 (1050)
+|..+|.+++++++...+... + .....+. +.+++..++++.+.+..+..+. ..++...+.+
T Consensus 269 -~G~p~ga~~~~~~i~~~~~~~--~---------~~~~~~T----~~~~p~~~aaa~a~L~~~~~~~---~~~~~~~~~~ 329 (426)
T PRK00062 269 -GGLPVGAFGGRREIMEQLAPL--G---------PVYQAGT----LSGNPLAMAAGLATLKLLKEPG---FYEELEALTK 329 (426)
T ss_pred -CCCcceeeeEHHHHHHhhccC--C---------Cceeccc----CcCCHHHHHHHHHHHHHHhcch---HHHHHHHHHH
Confidence 345577888888877765310 0 0000011 1234555666777888776553 3344556778
Q ss_pred HHHHHHhcc---CCee--ecCCCCccceeEEEeccccc------ccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEc
Q 001579 881 YMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRGLK------NTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEP 949 (1050)
Q Consensus 881 yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~~~------~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~ 949 (1050)
++.++|++. +... ..| .|... .+.++..+.. .........+.+.|.++|+.+....+ +.+++.
T Consensus 330 ~~~~~l~~~~~~~~~~~~vrg-~G~~~-~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~---~~~~~~- 403 (426)
T PRK00062 330 RLAEGLKEAAKKAGIPLTVNR-VGSMF-GLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQF---EAGFVS- 403 (426)
T ss_pred HHHHHHHHHHHHcCCceEEEE-ecceE-EEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCc---Cceeee-
Confidence 888888753 2221 222 23222 2223211100 00000135788899999999764432 345554
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 001579 950 TESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 950 te~~t~eeid~fv~aL~~i~~ei 972 (1050)
..+|++|||+++++|.+++.++
T Consensus 404 -~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 404 -AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred -ccCCHHHHHHHHHHHHHHHHhh
Confidence 5689999999999999888653
No 418
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=2.3e-12 Score=152.06 Aligned_cols=143 Identities=16% Similarity=0.172 Sum_probs=112.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|++|+.+++.++. . ++++||++...|+.+... +...|++++.++.
T Consensus 65 ~~~le~~lA~l~g~~~a-l~~~SG~~Ai~~al~all----~----pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 65 NAVLEERVAALEGGTAA-LAVASGHAAQFLVFHTLL----Q----PGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHHHHHHh----C----CCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 44788999999998864 667888887755544431 2 457899887766544322 4568999999876
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.... ...|-++|+|+++
T Consensus 136 -----~d~~~l~~ai~---~~tklV~vesp~NptG~v~-dl~~I~~la~~~gi~livD~a~a~~~--~~~pl~~gaDivv 204 (427)
T PRK05994 136 -----DDPASFERAIT---PRTKAIFIESIANPGGTVT-DIAAIAEVAHRAGLPLIVDNTLASPY--LIRPIEHGADIVV 204 (427)
T ss_pred -----CCHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCccccc--cCCccccCCcEEE
Confidence 38999999997 78999999998 5789887 89999999999999999999865332 3467789999999
Q ss_pred eCCccccc
Q 001579 789 LNLHKTFC 796 (1050)
Q Consensus 789 ~~~hKtf~ 796 (1050)
.++||+++
T Consensus 205 ~S~tK~lg 212 (427)
T PRK05994 205 HSLTKFLG 212 (427)
T ss_pred EcCccccC
Confidence 99999985
No 419
>PLN02242 methionine gamma-lyase
Probab=99.52 E-value=3.6e-13 Score=158.36 Aligned_cols=260 Identities=18% Similarity=0.222 Sum_probs=168.9
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHH-----HhCCCEEEEEc
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA-----AMCGMKIVSVG 708 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a-----~~~G~~vv~V~ 708 (1050)
..++++.++++.|.+.+. ..++|+++..++++++. . ++|+||++...++.+.... ...|++++.++
T Consensus 78 ~~~LE~~lA~l~g~~~~l-~~~sG~~Ai~~al~al~----~----~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 78 VLNLGRQMAALEGTEAAY-CTASGMSAISSVLLQLC----S----SGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred HHHHHHHHHHHhCCCeEE-EEccHHHHHHHHHHHHh----C----CCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 568999999999998764 45778776655444432 2 4578998887654444432 34788888776
Q ss_pred CCCCCCCCHHHHHHHHHcCCC-CEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcE
Q 001579 709 TDAKGNINIEELRKAAEANRD-NLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~-~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv 786 (1050)
. .|+++|+++++ + ++++|++++| |.+|.+. |+++|+++||++|+++++|.++. . ....|..+|+|+
T Consensus 149 ~-----~d~e~l~~~i~---~~~tklV~lesp~NPtG~v~-dl~~I~~la~~~gi~livDea~~--~-~~~~~~~~g~di 216 (418)
T PLN02242 149 I-----TDLEAVKKAVV---PGKTKVLYFESISNPTLTVA-DIPELARIAHEKGVTVVVDNTFA--P-MVLSPARLGADV 216 (418)
T ss_pred C-----CCHHHHHHhcC---cCCCEEEEEecCCCCCCccc-CHHHHHHHHHHhCCEEEEECCCC--c-cCCCHHHcCCcE
Confidence 5 38999999996 5 5999999999 5689887 89999999999999999998753 1 223566779999
Q ss_pred EEeCCccccccCCCCCCC-cceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHCh
Q 001579 787 CHLNLHKTFCIPHGGGGP-GMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGP-g~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1050)
++.+++|+|+. +|. .+|++++++++...+.... .++....+.... .. .+++...+.
T Consensus 217 vv~S~SK~l~g----~g~~~gG~iv~~~~li~~l~~~~---------~~~~~~~g~~~~--------~~--~A~l~~~~l 273 (418)
T PLN02242 217 VVHSISKFISG----GADIIAGAVCGPAELVNSMMDLH---------HGALMLLGPTMN--------PK--VAFELSERL 273 (418)
T ss_pred EEEeCccccCC----CCCceEEEEEcCHHHHHHHHHHh---------hhhhhccCCCCC--------HH--HHHHHHcCC
Confidence 99999999852 233 3588888776654432100 000000111110 11 223334454
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHH--CCcccCCCCCCCC
Q 001579 866 KGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD--YGFHGPTMSWPVP 942 (1050)
Q Consensus 866 eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d--~Gi~~~~~~~pv~ 942 (1050)
+-+....++..++++++++.|+++ +++.|+|- . .-...+++++.+. .| | +
T Consensus 274 ~tl~~r~~~~~~~a~~la~~L~~~~~~V~yP~l------------~------~~p~~~~~~~~~~~~~g-------~--g 326 (418)
T PLN02242 274 PHLSLRMKEHCRRAMEYAKRMKELGLKVIYPGL------------E------DHPQHALLKSMANKGYG-------F--G 326 (418)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCEEECCCC------------C------CCccHHHHHHhcccCCC-------c--e
Confidence 456666677789999999999986 44544331 0 1123466666542 12 1 2
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHH
Q 001579 943 GTLMIEPTESESKEELDRYCDALIS 967 (1050)
Q Consensus 943 ~~lrI~~te~~t~eeid~fv~aL~~ 967 (1050)
+-+-|.+ . ++++..+|++.|+-
T Consensus 327 ~~~sf~l--~-~~~~~~~f~~~l~~ 348 (418)
T PLN02242 327 GLLCLDM--D-TEERANRLMRYLQN 348 (418)
T ss_pred eEEEEEE--C-CHHHHHHHHHHhhc
Confidence 3344443 2 57788899988873
No 420
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.52 E-value=1.1e-12 Score=152.07 Aligned_cols=275 Identities=16% Similarity=0.136 Sum_probs=165.0
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.++++.+ + ..+..++|+.+..+++.++ . .++++||++...++..... +...|++++.++.
T Consensus 53 ~~~Le~~lA~l~~-~-~~v~~~sG~~Ai~~~l~al---l-----~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 122 (366)
T PRK07582 53 WRALEAALGELEG-A-EALVFPSGMAAITAVLRAL---L-----RPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT 122 (366)
T ss_pred HHHHHHHHHHHcC-C-CEEEECCHHHHHHHHHHHh---c-----CCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence 4578888999883 2 2355677776554333332 1 2457899877655333222 2347999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
++++ + .+. +++++|++++|+ ++|.+. |+++|+++||++|++++||+++.... ...|.++|+|+++
T Consensus 123 ~~~~----~----~~~---~~t~lV~le~p~NPtg~v~-di~~I~~~a~~~g~~lvVD~t~~~~~--~~~p~~~g~Divv 188 (366)
T PRK07582 123 AGMA----E----AAL---AGADLVLAETPSNPGLDVC-DLAALAAAAHAAGALLVVDNTTATPL--GQRPLELGADLVV 188 (366)
T ss_pred CChH----H----Hhc---cCceEEEEECCCCCCCCcc-CHHHHHHHHHHcCCEEEEECCCCCcc--ccCchhcCCcEEE
Confidence 5322 1 222 678999999995 678776 89999999999999999999864322 2357778999999
Q ss_pred eCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.++||+++.| +|-.+|+++++ +++.+.+... + ...+... +++ .+|. ...|-+-
T Consensus 189 ~S~sK~l~G~---~g~~~G~v~~~~~~l~~~l~~~------------~-~~~g~~~-~~~-------~a~l--~~r~l~t 242 (366)
T PRK07582 189 ASDTKALTGH---SDLLLGYVAGRDPELMAAVERW------------R-LLAGAIP-GPF-------EAWL--AHRSLGT 242 (366)
T ss_pred ecccccccCC---CCeeEEEEEcCcHHHHHHHHHH------------H-HHhCCCC-CHH-------HHHH--HHhcccc
Confidence 9999998421 22336888875 4444433110 0 0011111 111 1333 3333334
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeecCCC-Cc-----------cceeEEEecccccccCCCCHHHHHHHHHHCCc
Q 001579 868 LTEASKIAILNANYMAKRLEKHY---PILFRGVN-GT-----------VAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~~---~v~~~g~~-g~-----------~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi 932 (1050)
+....++..+++..+++.|+++. .|.|+|-. .| .-..+.|++. +.+++.+.|...++
T Consensus 243 l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~--------~~~~~~~~~~~l~~ 314 (366)
T PRK07582 243 LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA--------DAAAAERFVAASRL 314 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC--------CHHHHHHHHHhCCc
Confidence 55556777789999999999863 34565521 11 1111233332 34556666665565
Q ss_pred ccCCCCC---------C------C-CCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 933 HGPTMSW---------P------V-PGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 933 ~~~~~~~---------p------v-~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
.....+| + + ++.||+++.....++.|+.|.++|.
T Consensus 315 ~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~ 364 (366)
T PRK07582 315 VVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALD 364 (366)
T ss_pred ceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHh
Confidence 4321111 0 1 3579999987666666666666664
No 421
>PLN02509 cystathionine beta-lyase
Probab=99.52 E-value=4.9e-13 Score=158.19 Aligned_cols=217 Identities=19% Similarity=0.225 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEc
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 708 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~ 708 (1050)
...+++++++++.|.+.+ +..++|.++. +.++.+ . .++|+||++...|+.+... ....|++++.++
T Consensus 134 t~~aLE~~lA~leg~e~a-i~~~SG~aAi-~~il~l----l----~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd 203 (464)
T PLN02509 134 TRDALESLLAKLDKADRA-FCFTSGMAAL-SAVTHL----I----KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVN 203 (464)
T ss_pred HHHHHHHHHHHHhCCCEE-EEeCcHHHHH-HHHHHH----h----CCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeC
Confidence 366889999999998765 4556776554 222221 1 2468899988877665432 346799998886
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEE
Q 001579 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~ 787 (1050)
. .|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|.++.... +..|..+|+|++
T Consensus 204 ~-----~d~e~l~~ai~---~~TklV~lesPsNPtG~i~-Dl~~I~~lAk~~g~~lIVD~A~a~~~--~~~pl~~gaDiv 272 (464)
T PLN02509 204 T-----TNLDEVAAAIG---PQTKLVWLESPTNPRQQIS-DIRKIAEMAHAQGALVLVDNSIMSPV--LSRPLELGADIV 272 (464)
T ss_pred C-----CCHHHHHHhCC---cCCeEEEEECCCCCCCCHH-HHHHHHHHHHHcCCEEEEECCccccc--cCChhhcCCcEE
Confidence 4 47899999996 78999999999 5789887 89999999999999999999864333 356777899999
Q ss_pred EeCCccccccCCCCCCCcceeeeecccc-cCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChh
Q 001579 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHL-APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSK 866 (1050)
Q Consensus 788 ~~~~hKtf~~P~g~GGPg~G~i~v~~~l-~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~e 866 (1050)
+++++|+++.| |+...|++++++.. ...+. .. + ...+... +++ .|| +...|-+
T Consensus 273 v~S~tK~l~G~---gdv~gG~v~~~~~~l~~~~~--~~----------~-~~~g~~l-~p~-------~A~--l~lr~L~ 326 (464)
T PLN02509 273 MHSATKFIAGH---SDVMAGVLAVKGEKLAKEVY--FL----------Q-NSEGSGL-APF-------DCW--LCLRGIK 326 (464)
T ss_pred EecCcccccCC---CccceeEEEeccHHHHHHHH--HH----------H-HhcCCCc-CHH-------HHH--HHHhhhh
Confidence 99999998522 33347888876432 21110 00 0 0001101 111 123 3333444
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 867 GLTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 867 Gl~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
-|....++..+++.++++.|+++ -+|.|+|
T Consensus 327 tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPg 359 (464)
T PLN02509 327 TMALRIEKQQENARKIAMYLSSHPRVKKVYYAG 359 (464)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCccEEECCC
Confidence 56667778889999999999986 3466765
No 422
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.52 E-value=3e-12 Score=149.82 Aligned_cols=296 Identities=13% Similarity=0.094 Sum_probs=178.9
Q ss_pred cccHHHHHHHHHHHHHHhhCCC----ee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCC
Q 001579 627 AQGYQEMFNNLGEWLCTITGFD----SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 701 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~d----~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G 701 (1050)
.+|..++.+.+.+++.+..|.+ .. .+..++|++. +..++++.+. .+| ..++|++|...+..+...+.+.|
T Consensus 63 ~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~--al~~~~~~l~-~~g--d~~~vlv~~P~y~~~~~~~~~~g 137 (393)
T TIGR03538 63 TKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTRE--ALFAFAQAVI-NPG--QAPLVVMPNPFYQIYEGAALLAG 137 (393)
T ss_pred CCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHH--HHHHHHHHHc-CCC--CcceEEecCCCCcchHHHHHhcC
Confidence 3577677777777777765543 32 4555555542 2223334332 233 22358899876666666688899
Q ss_pred CEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc
Q 001579 702 MKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG 775 (1050)
Q Consensus 702 ~~vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~g 775 (1050)
.+++.++++++ ..+|+++|++++. +++++|++++| |.+|.+- +.+++|+++|+++|+++++|.++..-. .+
T Consensus 138 ~~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~ 214 (393)
T TIGR03538 138 AEPYFLNCTAENGFLPDFDAVPESVW---RRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDE 214 (393)
T ss_pred CeEEEeeccccCCCCCCHHHHHHHHh---hcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCC
Confidence 99999999654 4689999999986 57899999999 5788775 358999999999999999999864211 11
Q ss_pred -cCCC------CcccCc-----EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCC
Q 001579 776 -LTSP------GYIGAD-----VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIA 843 (1050)
Q Consensus 776 -l~~p------g~~GaD-----v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~ 843 (1050)
...+ ...+.| +++.++.|.|+. .|.++|++++.+++...+-. . ......+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~----~GlRvG~~i~~~~l~~~~~~-~-------------~~~~~~~ 276 (393)
T TIGR03538 215 GNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNL----PGLRSGFVAGDAEILKAFLR-Y-------------RTYHGCA 276 (393)
T ss_pred CCCCcCHHHhcccccccccccEEEEecchhhcCC----cccceEEEecCHHHHHHHHH-H-------------HHhhccC
Confidence 0011 112211 667788888754 47889999988766543310 0 0000111
Q ss_pred cchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHH
Q 001579 844 AAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDV 923 (1050)
Q Consensus 844 sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~v 923 (1050)
.+...+.. +.+.+ ...+-+++..+...++.+.+.+.|++.+.+.. +.+..+ +.++++ .+..++
T Consensus 277 ~~~~~q~~----~~~~l--~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~--p~gg~f--~~~~~~-------~~~~~~ 339 (393)
T TIGR03538 277 MPIPTQLA----SIAAW--NDEQHVRENRALYREKFAAVLEILGQVLDLEL--PDAGFY--LWPKVP-------GDDEAF 339 (393)
T ss_pred cCHHHHHH----HHHHh--cChHHHHHHHHHHHHHHHHHHHHHHhhCcccC--CCeeEE--EEEECC-------CCHHHH
Confidence 11111211 11111 12334555555566677778888877543322 222221 445553 245788
Q ss_pred HHHHH-HCCcccC-CCCC--------CCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q 001579 924 AKRLM-DYGFHGP-TMSW--------PVPGTLMIEPTESESKEELDRYCDALIS 967 (1050)
Q Consensus 924 akrL~-d~Gi~~~-~~~~--------pv~~~lrI~~te~~t~eeid~fv~aL~~ 967 (1050)
+++|. ++|+.+. ...| +..+.+||++.. +.++++..++.|.+
T Consensus 340 ~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~--~~~~l~~~l~~l~~ 391 (393)
T TIGR03538 340 ARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVA--PLEECVEAAERIRS 391 (393)
T ss_pred HHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 88875 6899853 2223 124689999874 57788877777765
No 423
>PRK07908 hypothetical protein; Provisional
Probab=99.52 E-value=2e-12 Score=148.93 Aligned_cols=280 Identities=15% Similarity=0.106 Sum_probs=170.1
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g 713 (1050)
..++++.+++.+|.+...+..++|++. +..++++ + . + +.++++..........++..|++++.+++++++
T Consensus 60 ~~~lr~aia~~~~~~~~~I~it~Ga~~--al~~~~~-l--~----~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~ 129 (349)
T PRK07908 60 ERRARAAVAARHGRTPDEVLLLAGAAE--GFALLAR-L--R----P-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDPPF 129 (349)
T ss_pred hHHHHHHHHHHhCcChhhEEECCCHHH--HHHHHHh-c--C----C-CeEEEeCCCChHHHHHHHHcCCEEEeeccCccc
Confidence 346778888888887666656666542 2222333 2 1 2 345555443333334467899999999998777
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCC-CcccC-c-EEEe
Q 001579 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP-GYIGA-D-VCHL 789 (1050)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p-g~~Ga-D-v~~~ 789 (1050)
.+|++++ + ++++++++++| |.+|.+. +.++|.++|++ +.++++|+++..-..+-..+ ..... + ++..
T Consensus 130 ~~d~~~l----~---~~~~~i~l~np~NPTG~~~-~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~ 200 (349)
T PRK07908 130 RLDPAAV----P---DDADLVVIGNPTNPTSVLH-PAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLR 200 (349)
T ss_pred CcChhHh----c---cCCCEEEEcCCCCCCCCCc-CHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEe
Confidence 8888854 3 46778999999 5799988 68999999974 88899999863211111111 11122 3 4455
Q ss_pred CCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHH
Q 001579 790 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLT 869 (1050)
Q Consensus 790 ~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~ 869 (1050)
+++|+|++| |.++|++++++++.+.+.... ...++++ ....++.+++.-.+.+-++
T Consensus 201 S~SK~~~l~----GlRiG~~~~~~~~~~~~~~~~--------------~~~~~~~------~~~~a~~~~~~~~~~~~~~ 256 (349)
T PRK07908 201 SLTKTWSLA----GLRVGYALGAPDVLARLTRGR--------------AHWPVGT------LQLEAIAACCAPRAVAEAA 256 (349)
T ss_pred ecccccCCc----cceeeeeecCHHHHHHHHhcC--------------CCCCccH------HHHHHHHHHhcccchHHHH
Confidence 889988644 788999999877665442100 0011111 1111122222211123345
Q ss_pred HHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC--CCCEEE
Q 001579 870 EASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP--VPGTLM 946 (1050)
Q Consensus 870 ~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~-~~~p--v~~~lr 946 (1050)
+..+....+.+++.+.|+++ .+.+..+.+.. -+.++++ +.+.+.+.|.++||.+.. ..|+ .++++|
T Consensus 257 ~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g~--~~~~~~~--------~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vR 325 (349)
T PRK07908 257 ADAARLAADRAEMVAGLRAV-GARVVDPAAAP--FVLVRVP--------DAELLRKRLRERGIAVRRGDTFPGLDPDYLR 325 (349)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CcEeccCCCce--EEEEECC--------cHHHHHHHHHhCCEEEEECCCCCCCCCCeEE
Confidence 55666667788899999875 33222211211 1345543 256888899999998643 3343 257999
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 947 IEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 947 I~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
|++. +.+|+++|+++|++++.
T Consensus 326 is~~---~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 326 LAVR---PRAEVPVLVQALAEILK 346 (349)
T ss_pred EEeC---CCccHHHHHHHHHHHHh
Confidence 9984 67899999999988753
No 424
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.52 E-value=7.9e-13 Score=154.01 Aligned_cols=209 Identities=18% Similarity=0.241 Sum_probs=145.2
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|+.+..++++++. . ++++||++...||.... .+...|++++.++.
T Consensus 56 ~~~le~~la~l~g~~~~-~~~~sG~~Ai~~al~al~----~----~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 56 VAAFEERIAALEGAERA-VATATGMSAIQAALMTLL----Q----AGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHHh----C----CCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 55789999999998765 456778776655544431 2 35789988887765432 35668999999986
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+ |+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++... .+..|.++|+|+++
T Consensus 127 ~-----d~~~l~~~i~---~~tklV~le~p~np~g~~~-dl~~I~~la~~~gi~livD~a~~~~--~~~~pl~~g~Divv 195 (380)
T TIGR01325 127 T-----DLNAWEAAVK---PNTKLVFVETPSNPLGELV-DIAALAELAHAIGALLVVDNVFATP--VLQQPLKLGADVVV 195 (380)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCccc--ccCCchhhCCCEEE
Confidence 3 7899999886 789999999994 689887 8999999999999999999986422 23456678999999
Q ss_pred eCCccccccCCCCCCCc-ceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPG-MGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg-~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.+++|+|+. .|-. .|+++.++++...+... . ...+...+ ++ .+| +...|.+-
T Consensus 196 ~S~sK~l~g----~g~~~gG~vv~~~~~~~~l~~~-~------------~~~g~~~~-p~-------~a~--~~l~~l~t 248 (380)
T TIGR01325 196 YSATKHIDG----QGRVMGGVIAGSEELMAEVAVY-L------------RHTGPAMS-PF-------NAW--VLLKGLET 248 (380)
T ss_pred eeccceecC----CCCeEEEEEEeCHHHHHHHHHH-H------------HhhCCCCC-HH-------HHH--HHHhccCc
Confidence 999999852 2222 37777776544332100 0 00111111 11 122 23345556
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001579 868 LTEASKIAILNANYMAKRLEKH 889 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~ 889 (1050)
+....++..+++.++++.|+++
T Consensus 249 l~~r~~~~~~~a~~la~~L~~~ 270 (380)
T TIGR01325 249 LSLRMQKQFDSALAIAEWLQAQ 270 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 6666777888999999999876
No 425
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.52 E-value=5.9e-13 Score=147.85 Aligned_cols=323 Identities=17% Similarity=0.192 Sum_probs=197.6
Q ss_pred hhcccHHHHHHHHHHHHHHhhCCCe--eeeccCchHHHH-HHHHHHHHHHHHh-----cCC-CCCCEEE-EcCCCCCccH
Q 001579 625 DQAQGYQEMFNNLGEWLCTITGFDS--FSLQPNAGAAGE-YAGLMVIRAYHKA-----RGD-HHRNVCI-IPVSAHGTNP 694 (1050)
Q Consensus 625 e~~~G~~~~i~el~~~lael~G~d~--~~l~~~sGa~ge-~a~Llair~y~~~-----~G~-~~r~~Vl-ip~saHgt~p 694 (1050)
|+.++..-+.+++-..+.++.|.+. ..++..+|+-.+ |++ ++.| |... +|- .-++-|+ .++-+|-+..
T Consensus 134 EiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~-~~Ar-yk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~ 211 (510)
T KOG0629|consen 134 EIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAM-NCAR-YKNFPEVKTKGMFALPPLILFTSEESHYSIK 211 (510)
T ss_pred EecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHH-HHHH-hhcCchhhhhhhhcCCcEEEEecccchhhHH
Confidence 5666666777888899999999875 345555666555 443 3333 3322 221 1123444 5777888888
Q ss_pred HHHHhCC---CEEEEEcCCCCCCCCHHHHHHHHHcCCCC---EEEEEEEcCCC-ccccccCHHHHHHHHHHcCCEEEEec
Q 001579 695 ATAAMCG---MKIVSVGTDAKGNINIEELRKAAEANRDN---LSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDG 767 (1050)
Q Consensus 695 a~a~~~G---~~vv~V~~d~~g~iD~e~L~~~i~~~~~~---taaV~vt~Pn~-~Gv~~~di~eI~~la~~~G~~v~vD~ 767 (1050)
..|.+.| ..++.|++|+.|.++++||+++|-+.+.+ ...|-.|..+| .|.|+ ||..|+++|++|+.|+|||+
T Consensus 212 kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFD-dL~~iadiC~k~~lWmHvDA 290 (510)
T KOG0629|consen 212 KAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFD-DLNGIADICEKHKLWMHVDA 290 (510)
T ss_pred HHHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccC-cHHHHHHHHHhcCEEEEeec
Confidence 8888888 68999999999999999999999765444 56666676654 89999 89999999999999999998
Q ss_pred cccccccc-cCCC--------CcccCcEEEeCCccccccCCCCCCCcceeeeecc-cccCCCCCC---ccccCCCC-C--
Q 001579 768 ANMNAQVG-LTSP--------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSH---PVVSTGGI-P-- 831 (1050)
Q Consensus 768 A~~~al~g-l~~p--------g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~---~vg~~~~~-~-- 831 (1050)
| .+| +..+ |-.-+|.++.|.||+++.|+.++ .+.+++ ++.....+- .+-. .|. +
T Consensus 291 A----wGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCs-----a~l~r~~gll~~Cn~~~A~YLFq-~dK~Ydv 360 (510)
T KOG0629|consen 291 A----WGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCS-----AFLTREEGLLQRCNQMSAIYLFQ-QDKFYDV 360 (510)
T ss_pred c----cccccccChhhHhhccCccccCceeecHHHhhcCcchhh-----HHHHHHHHHHHhhcccchhhhhc-cCceeec
Confidence 7 333 2222 34468999999999998887765 455553 333222111 0000 000 0
Q ss_pred CC-CCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEe
Q 001579 832 AP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVD 908 (1050)
Q Consensus 832 ~~-~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~ 908 (1050)
.+ ...++..+ |--.-+..-|--.+.-|-+|+++...+++.+|+|+.++|++- +..++..+. .+.+.+..-
T Consensus 361 S~DTgdK~iQC------GRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~p-e~~nv~fw~ 433 (510)
T KOG0629|consen 361 SYDTGDKAIQC------GRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEP-EHVNVCFWY 433 (510)
T ss_pred ccccccchhhc------CccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCC-ceEEEeecc
Confidence 00 01122111 111123345777788899999999999999999999999874 555543321 112211111
Q ss_pred ccc-ccc-cCCC--------CHHHHHHHHHHCCcccCCCCCC---CCCEEEEEcCC-CCCHHHHHHHHHHHHHH
Q 001579 909 LRG-LKN-TAGI--------EPEDVAKRLMDYGFHGPTMSWP---VPGTLMIEPTE-SESKEELDRYCDALISI 968 (1050)
Q Consensus 909 ~~~-~~~-~~g~--------~~~~vakrL~d~Gi~~~~~~~p---v~~~lrI~~te-~~t~eeid~fv~aL~~i 968 (1050)
+++ ++. +.+- -+-.|-.+++++|-..-+-+ | .++.+|+..+. ..+.+|+|-+++-+..+
T Consensus 434 vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~Yq-Pl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 434 VPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQ-PLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred CchHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEec-ccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 111 100 0000 01245566777775421111 2 13455544443 35678999988876654
No 426
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.52 E-value=1e-12 Score=153.53 Aligned_cols=286 Identities=15% Similarity=0.058 Sum_probs=178.1
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|++|...+++++- .++|+||++...|+.+.. .+...|++++.++.
T Consensus 67 ~~~Le~~lA~l~g~~~~-l~~~sgt~Ai~~~l~al~--------~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 67 SLALAQRLAEIEGGRHA-LLQPSGLAAISLVYFGLV--------KAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred HHHHHHHHHHHhCCCeE-EEeccHHHHHHHHHHHHh--------CCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence 46889999999998765 455777776654444431 246899999887775442 35678999998874
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+ |.++++++++ ++|++|++++|+ ..|... |+++|+++||++|+++++|+++.. +.+.+|.+.|+|+++
T Consensus 138 ~-----~~~~l~~~i~---~~tklV~le~p~Np~~~~~-di~~I~~ia~~~gi~livD~a~a~--~~~~~~l~~GaDi~v 206 (394)
T PRK07050 138 L-----IGAGIADLIQ---PNTRLIWLEAPGSVTMEVP-DVPAITAAARARGVVTAIDNTYSA--GLAFKPFEHGVDISV 206 (394)
T ss_pred C-----CHHHHHHhcC---CCCeEEEEECCCCCCccHh-hHHHHHHHHHHcCCEEEEECCccc--ccccCHHHcCCeEEE
Confidence 2 5578988886 789999999995 677776 899999999999999999998643 334678788999999
Q ss_pred eCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.+++|+++. +++.-+|.++++ +++...+-.. + +..+...+ + ..+| +...|-+.
T Consensus 207 ~S~tK~~~g---~~~~~gG~v~~~~~~~~~~~~~~------------~-~~~G~~~~-~-------~~a~--l~lr~l~t 260 (394)
T PRK07050 207 QALTKYQSG---GSDVLMGATITADAELHAKLKLA------------R-MRLGIGVS-A-------DDCS--LVLRGLPS 260 (394)
T ss_pred EECCceecC---CCCeeEEEEEECCHHHHHHHHHH------------H-HhcCCCCC-H-------HHHH--HHHcCCCc
Confidence 999999951 222225655554 4444332100 0 00111111 1 1123 33444555
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeecCCCC------------ccceeEEEecccccccCCCCHHHHHHHHHHCCc
Q 001579 868 LTEASKIAILNANYMAKRLEKH---YPILFRGVNG------------TVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~---~~v~~~g~~g------------~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi 932 (1050)
+....++..++|..+++.|+++ ..+.|++-.. ...+.+.|.+..- ......+++.++|...++
T Consensus 261 l~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~--~~~~~~~~~~~~l~~~~~ 338 (394)
T PRK07050 261 LQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDER--YSPAQVDAFVEALELFAI 338 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCC--CCHHHHHHHHHcCCCCee
Confidence 6666677778888999999875 2333433110 1123344444310 001234566666665554
Q ss_pred cc--C---CCCCC------------C-CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 933 HG--P---TMSWP------------V-PGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 933 ~~--~---~~~~p------------v-~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
-. + ++-.| + ++.+|+++.. |+.|.++++|.+++..
T Consensus 339 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl----E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 339 GWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL----EDEADLIADLEQALEA 391 (394)
T ss_pred ccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc----CCHHHHHHHHHHHHHH
Confidence 22 1 11001 1 2578988764 5667777777777654
No 427
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.51 E-value=1.6e-12 Score=152.56 Aligned_cols=305 Identities=18% Similarity=0.161 Sum_probs=195.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcC--CC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGT--DA 711 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~--d~ 711 (1050)
+.|.|+..++++|.+...|..|+++.|+.++++++- +++|+||++...|-++.....+.|...+.+.. ++
T Consensus 72 i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~--------~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np 143 (557)
T COG1982 72 IKEAQELAARVFGADHTYFVVNGTSTANKAVINAVL--------TPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNP 143 (557)
T ss_pred HHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhc--------CCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCc
Confidence 779999999999999988899999988877766543 35789999999999888888899999888854 33
Q ss_pred C----CCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEeccccccccccC-CC---Cccc
Q 001579 712 K----GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT-SP---GYIG 783 (1050)
Q Consensus 712 ~----g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~-~p---g~~G 783 (1050)
. |.++.+.+++.+.++.+.-+++++++|++.|+.- ++++|.+++|+.++||.+|.++..-..-.. .| -+.|
T Consensus 144 ~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~-n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~ 222 (557)
T COG1982 144 LYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCY-NLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGG 222 (557)
T ss_pred cccccCCCCHHHHHHHHHhChhhheeEEEecCccceEee-cHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcC
Confidence 2 6799999999987663322899999999999998 899999999999999999998753332111 12 1368
Q ss_pred CcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHH
Q 001579 784 ADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1050)
Q Consensus 784 aDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~l 863 (1050)
+|+++-|.||+++ +.--...|-+++. +.+.-..+... .+ ...+|++ .|.....+-.|-++...-
T Consensus 223 ~~~~tqS~HK~l~-----alSQaS~iHv~~~--~~~~~~r~nea---~~--~h~STSP----sY~l~ASlD~Ar~~~~~~ 286 (557)
T COG1982 223 ADFVTQSTHKLLA-----ALSQASMIHVKDG--RAVNHERFNEA---LM--MHQSTSP----SYPLMASLDVARMQEGNA 286 (557)
T ss_pred ceEEEechhhhhh-----hhhhhHHHhhCCC--ccCCHHHHHHH---HH--HHccCCc----hHHHHHHHHHHHHhhhhh
Confidence 9999999999984 3334455555542 11110000000 00 0011111 232222222233333333
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCC-Cc-cce--------eEEEeccccc-----ccCCCCHHHHHHH
Q 001579 864 GSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVN-GT-VAH--------EFIVDLRGLK-----NTAGIEPEDVAKR 926 (1050)
Q Consensus 864 G~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~-g~-~~~--------e~i~~~~~~~-----~~~g~~~~~vakr 926 (1050)
|.+-.++.....++.++++++..+++ +++..++.. ++ -.| .+.+| |.| .+.|+++.++++.
T Consensus 287 G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lD--P~Klti~tp~~Gipg~~v~~~ 364 (557)
T COG1982 287 GRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLD--PTKLTITTPEFGIPGAIVAKY 364 (557)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceecc--ccEEEEecCCCCCcHHHHHHH
Confidence 33323334566777788888877764 334322110 00 011 12222 111 1468999999999
Q ss_pred HHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 927 LMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 927 L~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
|.++|+...... .....+.+.+.+......++++++.++
T Consensus 365 L~e~gii~e~~~-d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 365 LREHGIIPEETG-DYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHcCCeeeecC-CceeeEEeeeccchHHHHHHHHHHHHH
Confidence 999999865332 112456666665445567777777777
No 428
>PRK08363 alanine aminotransferase; Validated
Probab=99.51 E-value=2.8e-12 Score=150.37 Aligned_cols=306 Identities=14% Similarity=0.092 Sum_probs=177.2
Q ss_pred ccHHHHHHHHHHHHHHhhCC--CeeeeccCch-HHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAG-AAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~--d~~~l~~~sG-a~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++....|. +...+..++| ++|.. ++++.+ . .+++.|+++...|..+...++..|.++
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~---~~~~~~-~----~~gd~Vl~~~p~y~~~~~~~~~~g~~~ 141 (398)
T PRK08363 70 EGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQ---LIFGAL-L----DPGDEILIPGPSYPPYTGLVKFYGGVP 141 (398)
T ss_pred CCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH---HHHHHh-C----CCCCEEEEcCCCCcchHHHHHHcCCEE
Confidence 46555555555555544453 3333444444 44443 233332 1 245789999887777767788899998
Q ss_pred EEE-cCCCC-CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccc-cC
Q 001579 705 VSV-GTDAK-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVG-LT 777 (1050)
Q Consensus 705 v~V-~~d~~-g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~g-l~ 777 (1050)
+.+ +.+++ +.+|+++|+++++ +++++|++++| |.+|.+. +++++|+++|+++|+++++|+++..- .-+ ..
T Consensus 142 v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~ 218 (398)
T PRK08363 142 VEYRTIEEEGWQPDIDDIRKKIT---EKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHV 218 (398)
T ss_pred EEeccccccCCcCCHHHHHhhCC---cceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCccc
Confidence 888 55555 4689999999986 68899999999 4789764 25999999999999999999985321 111 00
Q ss_pred CCCcc-cCc--EEEeCCccccccCCCCCCCcceeeee--cccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 778 SPGYI-GAD--VCHLNLHKTFCIPHGGGGPGMGPIGV--KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 778 ~pg~~-GaD--v~~~~~hKtf~~P~g~GGPg~G~i~v--~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
....+ +.+ +++.+++|+|+. .|.++|++++ ++++.+.+-... .... . ...+.+...+..
T Consensus 219 ~~~~~~~~~~vi~~~SfSK~~~~----~GlRiG~~~~~~~~~~~~~l~~~~-~~~~--------~--~~~~~s~~~q~~- 282 (398)
T PRK08363 219 SPGSLTKDVPVIVMNGLSKVYFA----TGWRLGYIYFVDPEGKLAEVREAI-DKLA--------R--IRLCPNTPAQFA- 282 (398)
T ss_pred CHHHcCcCCcEEEEecchhccCC----ccceEEEEEEeCcHHHHHHHHHHH-HHHh--------c--ccccCChHHHHH-
Confidence 11111 112 446678998864 4788999997 444332211000 0000 0 001111112221
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHH-HHHHHCC
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVA-KRLMDYG 931 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~va-krL~d~G 931 (1050)
+..++.. ..+-+++..+....+.+++.+.|+++..+.+..+.+.++ +++.+++. ...+..+++ +.|.++|
T Consensus 283 ---~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~--~~~~l~~~---~~~~~~~~~~~~l~~~g 353 (398)
T PRK08363 283 ---AIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFY--IFPRIEEG---PWKDDKEFVLDVLHEAH 353 (398)
T ss_pred ---HHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEE--EEEEeccC---CCCCHHHHHHHHHHhCC
Confidence 2222221 244566666666778888999997752222222223221 22344310 011344554 5567899
Q ss_pred ccc-CCCCCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 932 FHG-PTMSWPV--PGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 932 i~~-~~~~~pv--~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
|.+ +...|+. .+.+||++. .+.+++++.++.|++++.+
T Consensus 354 V~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 354 VLFVHGSGFGEYGAGHFRLVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 986 3333432 468999985 4678888888888876654
No 429
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.51 E-value=1.3e-12 Score=152.85 Aligned_cols=218 Identities=16% Similarity=0.149 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEEEEEc
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 708 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~vv~V~ 708 (1050)
...+++++++++.|.+.+ +..++|.++...++.++. .++|+||++...|+.... .+...|++++.++
T Consensus 65 ~~~~le~~lA~l~g~~~~-i~~ssG~~Ai~~~l~all--------~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd 135 (398)
T PRK08249 65 TVQAFEEKVRILEGAEAA-TAFSTGMAAISNTLYTFL--------KPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCE 135 (398)
T ss_pred HHHHHHHHHHHHhCCCeE-EEeCChHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcC
Confidence 356899999999998765 566777766544433321 245789998876654322 2446788888776
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEE
Q 001579 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~ 787 (1050)
. .|+++++++|+ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.... ...|..+|+|++
T Consensus 136 ~-----~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~-dl~~I~~la~~~gi~livD~t~a~~~--~~~~l~~~~Div 204 (398)
T PRK08249 136 T-----GDHEQIEAEIA---KGCDLLYLETPTNPTLKIV-DIERLAAAAKKVGALVVVDNTFATPI--NQNPLALGADLV 204 (398)
T ss_pred C-----CCHHHHHHhcC---CCCeEEEEECCCCCCCccC-CHHHHHHHHHHcCCEEEEECCcCccc--cCCchhhCCCEE
Confidence 4 68999999997 78999999999 4789887 89999999999999999999864222 234656899999
Q ss_pred EeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 788 ~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
+.+++|+|+.+ |.-..|+++.++++.+.+... + ...+... ++. .+| +..-|-+-
T Consensus 205 v~S~sK~l~g~---~~~~gG~vv~~~~l~~~l~~~------------~-~~~g~~~-s~~-------~a~--l~l~~l~t 258 (398)
T PRK08249 205 IHSATKFLSGH---ADALGGVVCGSKELMEQVYHY------------R-EINGATM-DPM-------SAY--LILRGMKT 258 (398)
T ss_pred eccCceecCCC---CCceEEEEECCHHHHHHHHHH------------H-HhcCCCC-CHH-------HHH--HHHhCcch
Confidence 99999998521 111236777666555433100 0 0011111 111 123 23334455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 868 LTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
+....++..+++..+++.|+++ -.|.|+|
T Consensus 259 L~~R~~~~~~na~~la~~L~~~p~v~~V~yP~ 290 (398)
T PRK08249 259 LKLRVRQQQESAMALAKYLQTHPKVEAVYYPG 290 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCC
Confidence 6666677789999999999875 2355665
No 430
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.51 E-value=3e-12 Score=148.38 Aligned_cols=286 Identities=16% Similarity=0.166 Sum_probs=175.3
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCC--C
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA--K 712 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~--~ 712 (1050)
.++++.+++.+|++..++..++|++. +..++++.+. .+ ++++|+++...++.+...+++.|.+++.++++. +
T Consensus 62 ~~lr~~ia~~~~~~~~~I~~t~G~~~--~l~~~~~~~~-~~---g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 135 (364)
T PRK04781 62 PGLRSALAALYGCAPEQLLIGRGSDE--AIDLLVRALC-VP---GRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGAD 135 (364)
T ss_pred HHHHHHHHHHhCcChHHEEEeCCHHH--HHHHHHHHhc-CC---CCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCcc
Confidence 47888899999988766666666542 2333344331 11 226788887755545555788999999999842 3
Q ss_pred C-CCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHH--cCCEEEEeccccccccccCCC---CcccCc
Q 001579 713 G-NINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHD--NGGQVYMDGANMNAQVGLTSP---GYIGAD 785 (1050)
Q Consensus 713 g-~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~--~G~~v~vD~A~~~al~gl~~p---g~~GaD 785 (1050)
| .+|++++.+++. .+++++|++++|| .+|.+. +.+++.++++. .++++++|.++.. +..-..+ -+....
T Consensus 136 ~~~~d~~~l~~~~~--~~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~~~~~iI~Deay~~-f~~~~~~~~~~~~~~~ 211 (364)
T PRK04781 136 GFHADVPAIVAAAL--ASNAKLVFLCSPSNPAGSAI-ALDQIERALQALQGKALVVVDEAYGE-FSDVPSAVGLLARYDN 211 (364)
T ss_pred CCCcCHHHHHHHHh--ccCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCCCCcEEEEeCcchh-hcCCcchHHHHhhCCC
Confidence 4 579999866653 2678999999994 799887 56666666654 4789999998631 1110011 011112
Q ss_pred -EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 786 -VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 786 -v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
+++.++.|+|++| |.++|++++++++.+.+-.. +...++++ .++. ++..++. -+
T Consensus 212 vi~~~SfSK~~gl~----GlRvGy~v~~~~l~~~l~~~--------------~~~~~~~~--~~~~----~a~~~l~-~~ 266 (364)
T PRK04781 212 LAVLRTLSKAHALA----AARIGSLIANAELIAVLRRC--------------QAPYPVPT--PCAA----LAEQALS-AP 266 (364)
T ss_pred EEEEecChhhcccc----cceeeeeeCCHHHHHHHHhc--------------cCCCCCCH--HHHH----HHHHHHh-cc
Confidence 5567788888654 78999999987776544210 00111221 1111 1222222 12
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCC-CCC
Q 001579 865 -SKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTM-SWP 940 (1050)
Q Consensus 865 -~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~-~~p 940 (1050)
.+-+.+..+...++.+++.+.|+++ +...++ +.+.+ +.++++ +..++.++|.++||.+... .|+
T Consensus 267 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p-~~g~f---~~~~~~--------~~~~~~~~l~~~gI~v~~~~~~~ 334 (364)
T PRK04781 267 ALAVTARRVAEVRAERERLHAALAQLPGVRRVYP-SQGNF---LLVRFD--------DAEAAFQALLAAGVVVRDQRAAP 334 (364)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECC-CCCcE---EEEEcC--------CHHHHHHHHHHCCeEEeeCCCCC
Confidence 1223333444556678888888765 221232 22322 445543 3578899999999987543 233
Q ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 941 -VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 941 -v~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
..+++||++. +.++.++|+++|+++..
T Consensus 335 ~~~~~~Ris~~---~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 335 RLSDALRITLG---TPEQNDRVLAALQRTQA 362 (364)
T ss_pred CCCCeEEEeCC---CHHHHHHHHHHHHHHHh
Confidence 4578999985 68999999999987653
No 431
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.51 E-value=1.8e-12 Score=151.00 Aligned_cols=287 Identities=15% Similarity=0.141 Sum_probs=184.2
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc----
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 288 (1050)
..+|++.+|+++|.+. +..+.+||++...++.++... +||+||++...|+++...+. ..|++++.+|.
T Consensus 35 ~~~le~~la~~~g~~~--~v~~~sgt~al~lal~al~~~--~Gd~Viv~~~~~~~~~~~~~----~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 35 NQALEQAFCQLTGNQH--AIAVSSATAGMHITLMALGIG--PGDEVITPSLTWVSTLNMIV----LLGATPVMVDVDRDT 106 (379)
T ss_pred HHHHHHHHHHHhCCCe--EEEECCHHHHHHHHHHHcCCC--CCCEEEECCCcHHHHHHHHH----HcCCEEEEEecCCCc
Confidence 4568899999999874 677899998877777665333 78999999999999987764 35888887754
Q ss_pred -----hhhhc-cCCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCC---CCCcccceEEEecC-cc
Q 001579 289 -----KDIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILK---PPGELGADIVVGSA-QR 358 (1050)
Q Consensus 289 -----~~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~---~pg~~GaDivvgs~-k~ 358 (1050)
+++++ ++++|++|+..++ +|...|+++|.++|+++|+++++++ ..++|... ..+.+|+|+..++. |.
T Consensus 107 ~~~d~~~l~~~i~~~tkav~~~~~--~G~~~d~~~i~~~a~~~gi~vi~D~-a~a~g~~~~~~~~g~~g~~~~Sf~~~K~ 183 (379)
T PRK11658 107 LMVTPEAIEAAITPRTKAIIPVHY--AGAPADLDAIRAIGERYGIPVIEDA-AHAVGTYYKGRHIGARGTAIFSFHAIKN 183 (379)
T ss_pred CCcCHHHHHHhcccCCeEEEEeCC--CCCcCCHHHHHHHHHHcCCeEEEEC-CCccCCeECCeecCCCCCEEEeCCCCCc
Confidence 34555 7788999886664 8999999999999999999999943 44554332 35778888777666 65
Q ss_pred ccccCCCCCcceEEEEEe-hhhhhcCCC-cEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001579 359 FGVPMGYGGPHAAFLATS-QEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1050)
Q Consensus 359 ~g~P~~~GGP~~G~la~~-~~~~r~lpg-rivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~ 436 (1050)
+.. | .+|++.++ +++.+++.. +..|...+.... .......+..+.+.|+ | .-+..+.||+-
T Consensus 184 l~~-----g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~~~~~~G~-n----~~~~~l~AAl~-- 246 (379)
T PRK11658 184 ITC-----A-EGGLVVTDDDELADRLRSLKFHGLGVDAFDR----QTQGRAPQAEVLTPGY-K----YNLADINAAIA-- 246 (379)
T ss_pred Ccc-----c-CceEEEECCHHHHHHHHHHHHcCCCcchhhh----hcccCCCcceeecccc-c----cCcCHHHHHHH--
Confidence 532 2 34566664 555544421 222322111000 0000011111122343 1 11234455552
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEc-CC--C---CccEEEEecC----C--HHHHHHHHHHcCceeeee--
Q 001579 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GL--P---FFDTVKVKCA----D--AHAIASAAYKIEMNLRVV-- 502 (1050)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~-~~--~---~~~~v~i~~~----~--~~~i~~~L~~~GI~~~~~-- 502 (1050)
+...++++++.++..++++++.+.|++++ +..+ .+ . ....+++.++ + ..++.+.|.++||..+..
T Consensus 247 ~~ql~~l~~~~~~r~~~a~~~~~~L~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~ 325 (379)
T PRK11658 247 LVQLAKLEALNARRREIAARYLQALADLP-FQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFR 325 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCc
Confidence 22236899999999999999999999886 4332 11 1 1123444432 2 678999999999965310
Q ss_pred -----------------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 503 -----------------------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 503 -----------------------~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
....|.+-++..-|.+|+++++++++
T Consensus 326 ~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~ 374 (379)
T PRK11658 326 AAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQ 374 (379)
T ss_pred CcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 02446666777788999999888885
No 432
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.51 E-value=1.2e-11 Score=145.54 Aligned_cols=312 Identities=14% Similarity=0.137 Sum_probs=179.0
Q ss_pred ccHHHHHHHHHHHHHHhhCC--CeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEE
Q 001579 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~--d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv 705 (1050)
+|..++.+.+.+++.+..|. +...+..+.|++. +..++++.+. .++++|+++...+..+...+...|.+++
T Consensus 74 ~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~v~v~~P~y~~~~~~~~~~g~~~~ 146 (409)
T PLN00143 74 GGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKH--AAEIIIKVLA-----RPEANILLPRPGFPDVETYAIFHHLEIR 146 (409)
T ss_pred CCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHH--HHHHHHHHHc-----CCCCEEEEcCCCCcCHHHHHHHcCCEEE
Confidence 57666666666666555454 3334445555542 2333444432 2457899998877667777889999999
Q ss_pred EEcCCC-C-CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccccC-C
Q 001579 706 SVGTDA-K-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVGLT-S 778 (1050)
Q Consensus 706 ~V~~d~-~-g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al~gl~-~ 778 (1050)
.++.++ + ..+|+++|+++++ ++++.+++++| |.+|.+- +.+++|.++|+++|+++++|.++.. ...+-. .
T Consensus 147 ~~~~~~~~~~~~d~~~l~~~~~---~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~ 223 (409)
T PLN00143 147 HFDLLPEKGWEVDLDAVEAIAD---ENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFV 223 (409)
T ss_pred EEeccCCCCCcCCHHHHHHhcc---cCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCc
Confidence 998853 3 4689999999886 67889999999 5789875 3588999999999999999998632 111110 1
Q ss_pred C-CcccC-c--EEEeCCccccccCCCCCCCcceeeeec-c-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 779 P-GYIGA-D--VCHLNLHKTFCIPHGGGGPGMGPIGVK-K-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 779 p-g~~Ga-D--v~~~~~hKtf~~P~g~GGPg~G~i~v~-~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
| ..+.. + +++.++.|+|++| |.++|++++. + .+...+. ...... +.......++ ...+.
T Consensus 224 ~~~~~~~~~~vi~~~SfSK~f~~p----GlRvG~~v~~~p~~~~~~~~--~~~~~~------~~~~~~~~~~-~~~q~-- 288 (409)
T PLN00143 224 PMGLFASIVPVITLGSISKRWMIP----GWGLGWLVTCDPSGLLQICE--IADSIK------KALNPAPFPP-TFIQA-- 288 (409)
T ss_pred chhhhcccCcEEEEccchhhcCCC----ccceEEEEeeCchhhhhhHH--HHHHHH------HHHhccCCCC-chHHH--
Confidence 1 11211 1 5667788888654 7899999883 2 2322110 000000 0000001111 11121
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCC-CHHHHHHHH-HH
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGI-EPEDVAKRL-MD 929 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~-~~~~vakrL-~d 929 (1050)
++..++...+.+-+++..+....+.+++.+.|+++ .......+.+..+ +.++++.... .+. +..+++.+| .+
T Consensus 289 --a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f--~w~~l~~~~~-~~~~~~~~~~~~ll~~ 363 (409)
T PLN00143 289 --AIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFF--ALVKLNLLLL-EDIEDDMEFCLKLAKE 363 (409)
T ss_pred --HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEE--EEEecchhhc-CCCCCHHHHHHHHHHh
Confidence 11222221112334555555556667777888764 1111111222221 4456542100 112 355666554 68
Q ss_pred CCccc-CCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 930 YGFHG-PTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 930 ~Gi~~-~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
+|+.+ +...|...+.+||++.. +.+++++-++.|+++++.
T Consensus 364 ~gV~v~pg~~f~~~~~iRi~~~~--~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 364 ESLIILPGVTVGLKNWLRITFAV--EQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred CCEEEeCccccCCCCeEEEEEcC--CHHHHHHHHHHHHHHHHH
Confidence 89985 33345456899999973 578888888888777654
No 433
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.51 E-value=8e-13 Score=154.86 Aligned_cols=211 Identities=17% Similarity=0.162 Sum_probs=144.8
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCcc-HH---HHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN-PA---TAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~-pa---~a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|..+..+++.++. .++++||++...|+.. .. .+...|++++.++.
T Consensus 72 ~~~le~~lA~l~g~~~a-l~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 72 VSMFEERLRLIEGAEAC-FATASGMSAVFTALGALL--------GAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred HHHHHHHHHHHhCCCcE-EEECChHHHHHHHHHHHh--------CCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 45899999999998754 566788776654443321 2457899988766543 22 24568999999975
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|++|++|+++.. ..+..|.++|+|+++
T Consensus 143 -----~d~~~l~~ai~---~~tklV~~esp~Nptg~v~-dl~~I~~la~~~g~~vivD~a~a~--~~~~~~~~~gaDivv 211 (403)
T PRK07810 143 -----EDLSQWEEALS---VPTQAVFFETPSNPMQSLV-DIAAVSELAHAAGAKVVLDNVFAT--PLLQRGLPLGADVVV 211 (403)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCCc--cccCChhhcCCcEEE
Confidence 38999999997 789999999995 789887 899999999999999999998542 223456678999999
Q ss_pred eCCccccccCCCCCCCcceeeeecccccC-CCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAP-FLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~-~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.+++|+|+. | |..-+|+++++++... .+.. .. ...+...+ ++ .+|. .+.|-+-
T Consensus 212 ~S~tK~l~g-~--g~~~gG~v~~~~~~~~~~l~~-~~------------~~~g~~~s-~~-------~a~l--~l~~L~t 265 (403)
T PRK07810 212 YSGTKHIDG-Q--GRVLGGAILGDREYIDGPVQK-LM------------RHTGPALS-AF-------NAWV--LLKGLET 265 (403)
T ss_pred ccCCceecC-C--cCceeEEEEeChHHHHHHHHH-HH------------HHhCCCCC-HH-------HHHH--HHhccCc
Confidence 999999952 1 1111478887765332 1100 00 00111111 11 1233 3334455
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC
Q 001579 868 LTEASKIAILNANYMAKRLEKHY 890 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~~ 890 (1050)
+....++..+++..+++.|+++.
T Consensus 266 l~~R~~~~~~~a~~~a~~L~~~p 288 (403)
T PRK07810 266 LALRVRHSNASALRIAEFLEGHP 288 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 67777888889999999998763
No 434
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.51 E-value=2.1e-12 Score=142.10 Aligned_cols=232 Identities=22% Similarity=0.250 Sum_probs=150.0
Q ss_pred HHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch---hhh
Q 001579 216 FQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK---DID 292 (1050)
Q Consensus 216 ~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~---~l~ 292 (1050)
+++.||.|-|.-. +.-+.+|.||.-.+++.+. +.||+||.+...+..+...+....+.+||+++++|.+ +++
T Consensus 67 lE~RiAaLEGG~a--a~a~aSG~AA~~~ai~~la---~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~ 141 (426)
T COG2873 67 LEERIAALEGGVA--ALAVASGQAAITYAILNLA---GAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFE 141 (426)
T ss_pred HHHHHHHhhcchh--hhhhccchHHHHHHHHHhc---cCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHH
Confidence 4578999988644 3334566665554444331 3899999999999988888876568899999999765 455
Q ss_pred c-cCCCeeEEEEEc-CCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCCcc
Q 001579 293 Y-KSGDVCGVLVQY-PGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGGPH 369 (1050)
Q Consensus 293 ~-l~~~t~~V~v~~-pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GGP~ 369 (1050)
+ ++++|++|++.. .|.-+.|.|+++|+++||++|++++| ++.++.+.+..|-+.|||||+.|. |++|+. |.. -
T Consensus 142 ~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliV-DNT~atpyl~rP~~hGADIVvHS~TK~igGh-Gt~--i 217 (426)
T COG2873 142 AAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIV-DNTFATPYLCRPIEHGADIVVHSATKYIGGH-GTA--I 217 (426)
T ss_pred HHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEE-ecCCCcceecchhhcCCCEEEEeecccccCC-ccc--c
Confidence 5 899999999875 68999999999999999999999999 466777788889999999999998 877652 211 1
Q ss_pred eEEEEEehhhhhcCCCcEEeEeecCC-----------CCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHh
Q 001579 370 AAFLATSQEYKRMMPGRIVGVSIDSS-----------GKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYH 438 (1050)
Q Consensus 370 ~G~la~~~~~~r~lpgrivG~s~d~~-----------g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~ 438 (1050)
.|.+.-...+--..++|.-..+.... |..+|.+ ..|-+-. |+-|..- ++. ..|+...
T Consensus 218 GG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~--~~r~~~l-RDlGa~l----sPf-----nAfl~lq 285 (426)
T COG2873 218 GGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFII--KARVQLL-RDLGATL----SPF-----NAFLLLQ 285 (426)
T ss_pred ceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHH--HHHHHHH-Hhccccc----CcH-----HHHHHHh
Confidence 23433322221111333333221111 1111111 1122222 1111000 111 1133455
Q ss_pred CcccHHHHHHHHHHHHHHHHHHHhcCCCEE
Q 001579 439 GPEGLKTIAQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 439 g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
|-|-|.-+.+|..++|..+++.|++...+.
T Consensus 286 GlETL~LRmerH~~NA~~vA~~L~~HpkV~ 315 (426)
T COG2873 286 GLETLSLRMERHCENALKVAEFLENHPKVA 315 (426)
T ss_pred chhhhHHHHHHHHHhHHHHHHHHhcCCCee
Confidence 555556667888899999999999875343
No 435
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.51 E-value=3e-12 Score=138.25 Aligned_cols=309 Identities=18% Similarity=0.181 Sum_probs=191.7
Q ss_pred cHHHHHHHHHHHHHHhhCCCeeeeccCchHHHH-HHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-----HHhCCC
Q 001579 629 GYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGE-YAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-----AAMCGM 702 (1050)
Q Consensus 629 G~~~~i~el~~~lael~G~d~~~l~~~sGa~ge-~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~-----a~~~G~ 702 (1050)
.+..+=..+-.+|+-|.|.....+....++..+ +..|.+ +|+.. .++.||+++..-+-..-+ +.+.|.
T Consensus 73 ~W~~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~a--alr~~----~~r~vIv~E~~~fpTdly~a~g~~~~~~~ 146 (407)
T COG3844 73 DWFDLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAA--ALRPQ----EGRRVIVSEGDNFPTDLYIAEGLADLLGI 146 (407)
T ss_pred chhhchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHH--HhccC----CCceEEeecCCCCCcchhhhcchhhhhcc
Confidence 444555567789999999875433333333334 222222 23221 244677776532211122 333332
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcCCC-ccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCc
Q 001579 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPST-HGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY 781 (1050)
Q Consensus 703 ~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn~-~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~ 781 (1050)
. .+-.+.+++++++++++ ++++.|+++..|+ +|-.. |+.+|.+++|++|+++..|-||..+.+.+ .-..
T Consensus 147 ~-----~~~~~~~~P~~~~~~~~---dd~AvV~L~~V~y~TGql~-dm~aiT~~AH~~galv~wDLAHsaGavp~-~Lh~ 216 (407)
T COG3844 147 G-----YDLEGVIAPRALEEAIT---DDVAVVLLSHVNYKTGQLL-DMRAITALAHQHGALVGWDLAHSAGAVPV-DLHA 216 (407)
T ss_pred c-----ccceeeeChHHHHHhhc---cceEEEEecccccccccee-eHHHHHHHHHhcCceEEeehhcccCCcce-eecc
Confidence 2 33346678889999997 9999999999985 89887 89999999999999999998875433222 2356
Q ss_pred ccCcEEEeCCccccccCCCCCCCc-ceeeeecc-cccCCCCCCccccCC--CCCCCC-----CCCCCCCCCcchhhhHHH
Q 001579 782 IGADVCHLNLHKTFCIPHGGGGPG-MGPIGVKK-HLAPFLPSHPVVSTG--GIPAPE-----KSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 782 ~GaDv~~~~~hKtf~~P~g~GGPg-~G~i~v~~-~l~~~lpg~~vg~~~--~~~~~~-----~~~~t~~i~sa~~g~~~~ 852 (1050)
+|+|+.+++.||.+. |||| .+++++.+ |..+..|.. -|+-+ +...-+ ..-...-.|+++ +...
T Consensus 217 ~gaDfaigcsyKYLN-----gGPGapa~l~v~~~h~e~~~~~l-sgW~gha~pf~m~~~y~p~~ga~rf~~gt~--~V~s 288 (407)
T COG3844 217 AGADFAIGCSYKYLN-----GGPGAPAGLFVAPRHRERSWPPL-SGWWGHARPFAMEEVYAPGPGARRFLCGTQ--PVLS 288 (407)
T ss_pred cCCCeeeeeeceecc-----CCCCCceeEEecccccccccccc-ccccCCCCcchhhhccCcCccccceeeCCc--chhh
Confidence 799999999999995 8885 57777765 444444432 22211 000000 000011122221 1111
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc---CCeeecCCCCc--cceeEEEecccccccCCCCHHHHHHHH
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRGVNGT--VAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~v~~~g~~g~--~~~e~i~~~~~~~~~~g~~~~~vakrL 927 (1050)
+++--..+....+-++.+..++.+.+++|+.+-++.. |.+-..++... .-..+.+..+ ..+.|++.|
T Consensus 289 ~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--------~~~~V~qaL 360 (407)
T COG3844 289 LAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP--------HGYQVMQAL 360 (407)
T ss_pred hHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC--------cHHHHHHHH
Confidence 2222344666777788999999999999999988764 33221121110 0111233322 578999999
Q ss_pred HHCCcccCCCCCCCCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Q 001579 928 MDYGFHGPTMSWPVPGTLMIEPTE-SESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 928 ~d~Gi~~~~~~~pv~~~lrI~~te-~~t~eeid~fv~aL~~i~~ei 972 (1050)
.++|+..- |.-++.||+.||. +++-+|+=..+++|.+++++.
T Consensus 361 i~rGVigD---~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 361 IDRGVIGD---FREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred HHcCcccc---ccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 99999763 3336899999997 677899999999999988764
No 436
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.51 E-value=8.7e-13 Score=153.45 Aligned_cols=209 Identities=19% Similarity=0.177 Sum_probs=141.3
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~vv~V~~ 709 (1050)
..+|++.++++.|.+.+ +..++|+.|..+++ + .. . ++++||+++..|+.... .+...|++++.++.
T Consensus 52 ~~~Le~~la~l~g~~~a-l~~~SG~~Al~~~l-~---~l-~----pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 52 RFALEELIADLEGGVKG-FAFASGLAGIHAVF-S---LF-Q----SGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred HHHHHHHHHHHhCCCCE-EEECCHHHHHHHHH-H---Hc-C----CCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 45789999999998765 55678876653322 2 11 2 45789998765543322 24557899888875
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|+++.. ..+..|..+|+|+++
T Consensus 122 -----~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~-di~~I~~la~~~gi~vivD~t~a~--~~~~~p~~~gaDivv 190 (380)
T PRK06176 122 -----SDLSQIKKAIK---PNTKALYLETPSNPLLKIT-DLAQCASVAKDHGLLTIVDNTFAT--PYYQNPLLLGADIVV 190 (380)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCceec-CHHHHHHHHHHcCCEEEEECCccc--cccCCccccCCCEEE
Confidence 48999999986 789999999995 789887 899999999999999999988642 234567789999999
Q ss_pred eCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
++++|+++.| |..-.|.+++++ ++...+.. . + ...+...+ + ..+| +...|-+.
T Consensus 191 ~S~tK~l~g~---~d~~gG~vv~~~~~~~~~~~~--~----------~-~~~G~~~~-~-------~~~~--l~~~gl~t 244 (380)
T PRK06176 191 HSGTKYLGGH---SDVVAGLVTTNNEALAQEIAF--F----------Q-NAIGGVLG-P-------QDSW--LLQRGIKT 244 (380)
T ss_pred ecCceeccCC---ccceeeEEEecHHHHHHHHHH--H----------H-HHhcCCCC-H-------HHHH--HHHhccCc
Confidence 9999998522 111257777754 33322210 0 0 00111111 1 1123 34456566
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001579 868 LTEASKIAILNANYMAKRLEKH 889 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~ 889 (1050)
+....++...++..+++.|++.
T Consensus 245 l~~R~~~~~~~a~~la~~L~~~ 266 (380)
T PRK06176 245 LGLRMEAHQKNALCVAEFLEKH 266 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 6666677778888999999875
No 437
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.50 E-value=4.7e-12 Score=147.41 Aligned_cols=212 Identities=18% Similarity=0.165 Sum_probs=148.7
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 290 (1050)
.++++.+|++.|.+ ++.++.++++++.++++++ .. +||+|+++...|+++...+...+...++++..++. ++
T Consensus 54 ~~le~~lA~l~g~~--~v~~~~gg~~Ai~~~l~al-l~--~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~ 128 (382)
T TIGR02080 54 DLLQQALAELEGGA--GAVVTNTGMSAIHLVTTAL-LG--PDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQA 128 (382)
T ss_pred HHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHH-cC--CCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHH
Confidence 45678999999954 5889999998888877765 33 88999999999998888877666666788888754 45
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+ +..+.+....|-++|+|++++|. |.++++ ++
T Consensus 129 l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD-~a~~~~~~~~pl~~gaDivv~S~sK~l~G~---~~ 204 (382)
T TIGR02080 129 LRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVD-NTFLSPALQNPLALGADLVLHSCTKYLNGH---SD 204 (382)
T ss_pred HHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE-CCCcccccCCchhhCCCEEEeecceeccCC---CC
Confidence 555 7778999999998 68999999999999999999999994 45555555556678999999998 766532 11
Q ss_pred cceEEEEEe-hhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 368 PHAAFLATS-QEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 368 P~~G~la~~-~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
--.|++.++ +++.+++- ..|...| +|. +++ . .|+...|-+-|...
T Consensus 205 ~~~G~i~~~~~~~~~~l~-------------------------~~~~~~g---~~~-sp~---~--a~l~lr~l~tl~~R 250 (382)
T TIGR02080 205 VIAGAVIAKDPQVAEELA-------------------------WWANNLG---VTG-GAF---D--SYLTLRGLRTLVAR 250 (382)
T ss_pred ceeEEEEeCCHHHHHHHH-------------------------HHHHccC---CCC-CHH---H--HHHHHcccchHHHH
Confidence 225776664 33433220 0001111 111 122 1 12344444555556
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.++..+++..+++.|++.+.++
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~ 272 (382)
T TIGR02080 251 MRLQQRNAQAIVEYLQTQPLVK 272 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCee
Confidence 6777899999999999875454
No 438
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.50 E-value=5.4e-12 Score=145.29 Aligned_cols=268 Identities=15% Similarity=0.133 Sum_probs=177.9
Q ss_pred HHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchh----
Q 001579 215 NFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD---- 290 (1050)
Q Consensus 215 e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~---- 290 (1050)
++++.+|++++.++.++.++.|++.+...+..++ . .+||+|++++-.|+.+...+ +..|++++.++.++
T Consensus 64 ~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l-~--~~gd~vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~~ 136 (353)
T PRK05387 64 ALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAF-F--NHDRPLLFPDITYSFYPVYA----GLYGIPYEEIPLDDDFSI 136 (353)
T ss_pred HHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh-c--CCCCEEEEeCCCHHHHHHHH----HHcCCEEEEeecCCCCCC
Confidence 6778999999999999999999997766655544 2 28899999999987766554 34588888776531
Q ss_pred -hhccCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhC-CcEEEEEecCccccC---CCCCCcccceEEEecC-ccccccC
Q 001579 291 -IDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN-GVKVVMATDLLALTI---LKPPGELGADIVVGSA-QRFGVPM 363 (1050)
Q Consensus 291 -l~~l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~-galliV~a~~~alg~---l~~pg~~GaDivvgs~-k~~g~P~ 363 (1050)
++++...+++|++.+| |.+|.+.+.+++.++++.+ |++++++.....++. +.......-.|+++|. |.|+.|
T Consensus 137 d~~~l~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~- 215 (353)
T PRK05387 137 DVEDYLRPNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLA- 215 (353)
T ss_pred CHHHHHhcCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcch-
Confidence 2223245677888888 7899999999999999876 888888431111211 0001123346888886 888654
Q ss_pred CCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccH
Q 001579 364 GYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGL 443 (1050)
Q Consensus 364 ~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl 443 (1050)
|...||+++++++++.+. +.+...+..+...+ +..++. ..+...+.+
T Consensus 216 ---GlR~G~~~~~~~~~~~l~----------------------------~~~~~~~~~~~~~~-~q~~~~-~~l~~~~~~ 262 (353)
T PRK05387 216 ---GLRVGFAIGHPELIEALN----------------------------RVKNSFNSYPLDRL-AQAGAI-AAIEDEAYF 262 (353)
T ss_pred ---hhhceeeecCHHHHHHHH----------------------------HhhccCCCCCcCHH-HHHHHH-HHhcCHHHH
Confidence 345789988877765541 00111111111111 111111 122223446
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC--HHHHHHHHHHcCceeeeec----CCeEEEEeccCCCH
Q 001579 444 KTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD----SNTVTASFDETTTL 517 (1050)
Q Consensus 444 ~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~--~~~i~~~L~~~GI~~~~~~----~~~lris~~e~~t~ 517 (1050)
+++.+++.++.+++.+.|+++| +++.... ..-+.+..++ ..++.+.|.++||.++... ++.+|++++ +.
T Consensus 263 ~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~ 337 (353)
T PRK05387 263 EETRAKVIATRERLVEELEALG-FEVLPSK-ANFVFARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TD 337 (353)
T ss_pred HHHHHHHHHHHHHHHHHHHHCC-CeECCCc-CcEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CH
Confidence 7888888899999999999987 8765321 1123445543 7889999999999886542 368999987 67
Q ss_pred HHHHHHHHHHh
Q 001579 518 EDVDKLFIVFA 528 (1050)
Q Consensus 518 edId~lv~~l~ 528 (1050)
+++++++++|+
T Consensus 338 ~~~~~~~~~L~ 348 (353)
T PRK05387 338 EEMEALVDALK 348 (353)
T ss_pred HHHHHHHHHHH
Confidence 99999999986
No 439
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.50 E-value=3.5e-12 Score=150.32 Aligned_cols=142 Identities=24% Similarity=0.225 Sum_probs=116.6
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---hh
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---KD 290 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~~ 290 (1050)
.++++.+|++.|.+. +.++.+|++++.+++++. .. +||+||++...|+.+...+...++..|++++.+|. ++
T Consensus 60 ~~le~~lA~l~g~~~--~v~~~sG~~Ai~~al~~l-~~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~ 134 (418)
T TIGR01326 60 DVLEQRIAALEGGVA--ALAVASGQAAITYAILNL-AQ--AGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEE 134 (418)
T ss_pred HHHHHHHHHHhCCCe--EEEEccHHHHHHHHHHHH-hC--CCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHH
Confidence 467889999999754 678899999888877654 22 78999999999998888776666778999998876 44
Q ss_pred hhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccc
Q 001579 291 IDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1050)
Q Consensus 291 l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~ 361 (1050)
+++ +++++++|++.+| |.+|.+.|+++|+++||++|++++|+ +.++.+....|.++|+||++.|. |.|++
T Consensus 135 l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD-~t~~~~~~~~~l~~g~Divv~S~sK~l~g 207 (418)
T TIGR01326 135 FEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVD-NTFATPYLCRPIDHGADIVVHSATKYIGG 207 (418)
T ss_pred HHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE-CCCchhhcCCchhcCCeEEEECccccccC
Confidence 555 7788999999987 78999999999999999999999994 45565555567788999999998 77753
No 440
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.50 E-value=4.6e-13 Score=136.04 Aligned_cols=161 Identities=27% Similarity=0.361 Sum_probs=118.2
Q ss_pred HHHHHHHHHHhh--CCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH-HHHHhCCCEEEEEcCC
Q 001579 634 FNNLGEWLCTIT--GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP-ATAAMCGMKIVSVGTD 710 (1050)
Q Consensus 634 i~el~~~lael~--G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~p-a~a~~~G~~vv~V~~d 710 (1050)
+.++++++++++ +.+.+.+.+ +|+.|...++++++ ..+++|+++...|+.+. ..+...|++++.++.+
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~-~~t~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVP-SGTGANEAALLALL--------GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeC-CcHHHHHHHHHHhC--------CCCCEEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 458899999999 655555554 66666655555432 13568999888887777 6788899999999987
Q ss_pred CCCCCCH--HHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccC--CCCcccCc
Q 001579 711 AKGNINI--EELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT--SPGYIGAD 785 (1050)
Q Consensus 711 ~~g~iD~--e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~--~pg~~GaD 785 (1050)
.++..+. +.+++... .++++++++++|+ ..|... ++++|.++||++|+++++|+++........ .+...++|
T Consensus 73 ~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~-~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d 149 (170)
T cd01494 73 DAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLV-PLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGAD 149 (170)
T ss_pred CCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEc-CHHHHHHHHHHcCCEEEEecccccccccccccccccccCC
Confidence 6654443 35544432 4789999999986 467766 789999999999999999998653222210 23456899
Q ss_pred EEEeCCccccccCCCCCCCcceeeeec
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGVK 812 (1050)
Q Consensus 786 v~~~~~hKtf~~P~g~GGPg~G~i~v~ 812 (1050)
+++.++||+|+ +||+|++.+|
T Consensus 150 ~~~~s~~K~~~------~~~~G~l~~~ 170 (170)
T cd01494 150 VVTFSLHKNLG------GEGGGVVIVK 170 (170)
T ss_pred EEEEEcccccC------CCceEEEEeC
Confidence 99999999983 4899999875
No 441
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.50 E-value=3.2e-12 Score=147.53 Aligned_cols=281 Identities=15% Similarity=0.145 Sum_probs=173.8
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC--
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-- 712 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~-- 712 (1050)
.++++.+++.++.+..++..++|++. +...+++.+ . + +.|+++...++.+...++..|++++.++++++
T Consensus 57 ~~lr~~ia~~~~~~~~~i~it~Ga~~--~l~~~~~~~--~----~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~ 127 (354)
T PRK06358 57 LELRKRIASFEQLDLENVILGNGATE--LIFNIVKVT--K----P-KKVLILAPTFAEYERALKAFDAEIEYAELTEETN 127 (354)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHH--HHHHHHHHh--C----C-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccC
Confidence 47888899988988766666667652 222333432 1 2 35788877665555567889999999998754
Q ss_pred CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-ccc-CCCC-cc-cCc
Q 001579 713 GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGL-TSPG-YI-GAD 785 (1050)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~gl-~~pg-~~-GaD 785 (1050)
..+| +++.+++. +++++|++++| |.+|.+. +.+++|.++|+++|+++++|.++..-. .+. ..+. .. ..+
T Consensus 128 ~~~d-~~~~~~~~---~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 203 (354)
T PRK06358 128 FAAN-EIVLEEIK---EEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFK 203 (354)
T ss_pred CCcc-HHHHHhhc---cCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCC
Confidence 3688 67666665 56888989999 4788775 258999999999999999999863211 110 0110 01 112
Q ss_pred --EEEeCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHH
Q 001579 786 --VCHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAM 862 (1050)
Q Consensus 786 --v~~~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~ 862 (1050)
++..++.|+|++| |.++|++++. +.+...+.. ......+++ ..+. +....
T Consensus 204 ~vi~~~S~SK~~gl~----G~RiG~lv~~~~~~~~~~~~--------------~~~~~~~~~--~~q~-------~~~~~ 256 (354)
T PRK06358 204 NLIIIRAFTKFFAIP----GLRLGYGLTSNKNLAEKLLQ--------------MREPWSINT--FADL-------AGQTL 256 (354)
T ss_pred CEEEEEechhhccCc----chhheeeecCCHHHHHHHHH--------------hCCCCcchH--HHHH-------HHHHH
Confidence 5567788888654 7899999874 444333210 000011111 1111 11122
Q ss_pred HChh-hHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC
Q 001579 863 MGSK-GLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP 940 (1050)
Q Consensus 863 lG~e-Gl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~-~~~p 940 (1050)
+..+ -+++..+....+.+++.+.|++...+.+..+.+.+ +++.++ +..+++++|.++||.+.. ..|+
T Consensus 257 l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f---~~~~~~--------~~~~~~~~l~~~gI~v~~~~~f~ 325 (354)
T PRK06358 257 LDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNF---IFFKLE--------KPIDLRKELLKKGILIRSCSNYR 325 (354)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceE---EEEEcC--------chHHHHHHHHHCCeEEEECCCCC
Confidence 2222 23455555566778888999775222221222322 345543 236899999999998643 3353
Q ss_pred --CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 941 --VPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 941 --v~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
..+++||++ .++++.++|+++|..++
T Consensus 326 ~~~~~~iRls~---~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 326 GLDENYYRVAV---KSREDNKKLLKALEVIL 353 (354)
T ss_pred CCCCCEEEEEe---CCHHHHHHHHHHHHHHh
Confidence 236899997 46899999999998764
No 442
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.50 E-value=1.2e-13 Score=155.26 Aligned_cols=154 Identities=18% Similarity=0.251 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcC---
Q 001579 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD--- 287 (1050)
Q Consensus 211 e~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~--- 287 (1050)
..+.++|+.+|+++|.+.+ ..+++|+|.+..+++++.. ++||+|++++.+|+++...+.. .|+++++++
T Consensus 59 g~i~~~~~~~A~~~ga~~~-~~~~~Gst~a~~~~l~al~---~~gd~Vlv~~~~h~s~~~~~~~----~g~~~~~v~~~~ 130 (294)
T cd00615 59 GPIKEAQELAARAFGAKHT-FFLVNGTSSSNKAVILAVC---GPGDKILIDRNCHKSVINGLVL----SGAVPVYLKPER 130 (294)
T ss_pred hHHHHHHHHHHHHhCCCCE-EEEcCcHHHHHHHHHHHcC---CCCCEEEEeCCchHHHHHHHHH----CCCEEEEecCcc
Confidence 3578899999999998752 2246888888888877652 3899999999999999988753 366666553
Q ss_pred -----------chhhhc-cC--CCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccc-----cCCC-CCCcc
Q 001579 288 -----------LKDIDY-KS--GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLAL-----TILK-PPGEL 347 (1050)
Q Consensus 288 -----------~~~l~~-l~--~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~al-----g~l~-~pg~~ 347 (1050)
++++++ +. +++++|++++||++|.+.|+++|+++||++|++++|+. .++. +.+. ...++
T Consensus 131 ~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDe-A~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 131 NPYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDE-AHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred CcccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEEC-cchhhhccCcccCcchhhc
Confidence 234555 43 57899999999999999999999999999999999942 3321 1111 22457
Q ss_pred cceEEEecC-ccccccCCCCCcceEEEEEehh
Q 001579 348 GADIVVGSA-QRFGVPMGYGGPHAAFLATSQE 378 (1050)
Q Consensus 348 GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~ 378 (1050)
|+|++++|+ |++++| +++|+++++++
T Consensus 210 ~~div~~S~hK~l~g~-----~~~~~l~~~~~ 236 (294)
T cd00615 210 GADIVVQSTHKTLPAL-----TQGSMIHVKGD 236 (294)
T ss_pred CCcEEEEchhcccchH-----hHHHHHHhCCC
Confidence 999999999 666433 23466666543
No 443
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.50 E-value=1.3e-11 Score=144.96 Aligned_cols=297 Identities=12% Similarity=0.100 Sum_probs=169.3
Q ss_pred HHHHHHHHhhCC------Ceee-eccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEc
Q 001579 636 NLGEWLCTITGF------DSFS-LQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVG 708 (1050)
Q Consensus 636 el~~~lael~G~------d~~~-l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~ 708 (1050)
++++.+++++|. +... +..+++++|. .++++++. .++++|+++...+......+...|++++.++
T Consensus 77 ~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al---~~~~~~l~-----~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~ 148 (403)
T TIGR01265 77 AAREAVAEYLSSDLPGKLTADDVVLTSGCSQAI---EICIEALA-----NPGANILVPRPGFPLYDTRAAFSGLEVRLYD 148 (403)
T ss_pred HHHHHHHHHHHhhcCCCCCHHHEEEecChHHHH---HHHHHHhC-----CCCCEEEEeCCCchhHHHHHHHcCCEEEEec
Confidence 445555666552 2223 3444445444 33344331 2457899988766555556788999999998
Q ss_pred CCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc--cCCCC
Q 001579 709 TDA--KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG--LTSPG 780 (1050)
Q Consensus 709 ~d~--~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~g--l~~pg 780 (1050)
.+. ++.+|+++++++++ ++++++++++| |.+|.+. +++++|.++|+++|+++++|+++..-. .+ +....
T Consensus 149 ~~~~~~~~~d~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 225 (403)
T TIGR01265 149 LLPEKDWEIDLDGLEALAD---EKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMA 225 (403)
T ss_pred CCcccCCccCHHHHHHHhC---cCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchh
Confidence 754 36799999999886 67899999999 5789874 259999999999999999999853211 11 00111
Q ss_pred cccC--c-EEEeCCccccccCCCCCCCcceeeeecc--cc-----cCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhH
Q 001579 781 YIGA--D-VCHLNLHKTFCIPHGGGGPGMGPIGVKK--HL-----APFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSA 850 (1050)
Q Consensus 781 ~~Ga--D-v~~~~~hKtf~~P~g~GGPg~G~i~v~~--~l-----~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~ 850 (1050)
.+.. . +++.++.|+|+.| |-++|++++.. .+ ...+... .. .....+ ...|.
T Consensus 226 ~~~~~~~vi~~~S~SK~~~~p----GlRiG~~v~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~--~~~q~ 286 (403)
T TIGR01265 226 SFASIVPVLSLGGISKRWVVP----GWRLGWIIIHDPHGIFRDTVLQGLKNL------------LQ-RILGPA--TIVQG 286 (403)
T ss_pred hhccCCcEEEEeecccccCCC----cceEEEEEEeCchhhhHHHHHHHHHHH------------hh-hhcCCC--hHHHH
Confidence 1111 2 4556788988654 67899998742 21 1111000 00 001111 11121
Q ss_pred HHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHH-HH
Q 001579 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL-MD 929 (1050)
Q Consensus 851 ~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL-~d 929 (1050)
++..++......-+++..+....+.+++.+.|+.+..+.+..+.+..+ +.++++.-......+..+++++| .+
T Consensus 287 ----~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f--~~~~~~~~~~~~~~~~~~~~~~l~~~ 360 (403)
T TIGR01265 287 ----ALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMY--LMVKLELELFPEIKDDVDFCEKLVRE 360 (403)
T ss_pred ----HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeE--EEEeccccccCCCCCHHHHHHHHHHh
Confidence 112222221122344455666677888989887642222222222221 34555310000012567888886 57
Q ss_pred CCcccC-CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 930 YGFHGP-TMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 930 ~Gi~~~-~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
+|+.+. .-.|...+.+||++.. .++.+++.++.|.++++
T Consensus 361 ~gv~v~pg~~f~~~~~iRis~~~--~~~~l~~~l~~l~~~~~ 400 (403)
T TIGR01265 361 ESVICLPGSAFGLPNWVRITITV--PESMLEEACSRIKEFCE 400 (403)
T ss_pred CCEEEeCccccCCCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 899853 3334346899999973 46666666666655543
No 444
>PRK08175 aminotransferase; Validated
Probab=99.50 E-value=8.5e-12 Score=146.19 Aligned_cols=305 Identities=13% Similarity=0.118 Sum_probs=180.3
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--ee-eeccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCC
Q 001579 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGM 702 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~d--~~-~l~~~sGa~-ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~ 702 (1050)
.+|..++.+.+.+++.+..|.. .. ++..++|++ |.. ++++.+. .++++|++++..++.+...++..|.
T Consensus 66 ~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~---~~~~~~~-----~~gd~Vlv~~P~y~~~~~~~~~~g~ 137 (395)
T PRK08175 66 SRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLA---HLMLATL-----DHGDTVLVPNPSYPIHIYGAVIAGA 137 (395)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHH---HHHHHhC-----CCCCEEEEcCCCCcchHHHHHHcCC
Confidence 3677777777777777665653 22 355555654 332 2223221 2457899998887777777888999
Q ss_pred EEEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cccCC
Q 001579 703 KIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VGLTS 778 (1050)
Q Consensus 703 ~vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~gl~~ 778 (1050)
+++.++.++++ .++++|+++++++.+++++|++++| |.+|.+- +.+++|+++|+++|+++++|.++..-. .+...
T Consensus 138 ~~~~v~~~~~~-~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~ 216 (395)
T PRK08175 138 QVRSVPLVEGV-DFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKA 216 (395)
T ss_pred eEEEEecccCC-CcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCC
Confidence 99999987653 4689999988755468999999988 5789775 246899999999999999998863211 11111
Q ss_pred C------CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 779 P------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 779 p------g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
+ +..+..+.+.++.|+|+.| |.++|+++.++++...+-.. ......+.++ ..+.
T Consensus 217 ~~~~~~~~~~~~~i~~~S~SK~~g~p----GlRiG~~~~~~~l~~~~~~~------------~~~~~~~~~~--~~q~-- 276 (395)
T PRK08175 217 PSIMQVPGAKDVAVEFFTLSKSYNMA----GWRIGFMVGNPELVSALARI------------KSYHDYGTFT--PLQV-- 276 (395)
T ss_pred cchhcCCCcccCEEEEeeccccccCc----chhheeeeCCHHHHHHHHHH------------HhhcccCCCc--HHHH--
Confidence 1 1112235567888988543 66789999887766543210 0000011111 1111
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCC
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYG 931 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~G 931 (1050)
++.+.+. .+.+-+++..+...++.+++.+.|++. .+.+..+.+.. -+.++++.. ....+..+++.+|. ++|
T Consensus 277 --~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~--~i~i~l~~~--~~~~~~~~~~~~l~~~~g 348 (395)
T PRK08175 277 --AAIAALE-GDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASM--YVWAKIPEP--YAAMGSLEFAKKLLNEAK 348 (395)
T ss_pred --HHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEE--EEEEECCcc--cCCCCHHHHHHHHHHhCC
Confidence 1112221 123335555555667778898988875 22211122212 145665421 01134688888765 689
Q ss_pred cccCCC-CCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 932 FHGPTM-SWPV--PGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 932 i~~~~~-~~pv--~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
+.+... .|+. .+.+||++. .+.+++...++.|.+++.
T Consensus 349 v~v~p~~~f~~~~~~~lRis~~--~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 349 VCVSPGIGFGDYGDTHVRFALI--ENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred EEEeCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHH
Confidence 976432 3432 368999885 355666665555555543
No 445
>PRK05939 hypothetical protein; Provisional
Probab=99.49 E-value=5.9e-12 Score=147.22 Aligned_cols=142 Identities=16% Similarity=0.189 Sum_probs=115.1
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---h
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---K 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---~ 289 (1050)
..++++.+++|.|.+. +.++.+|++|+.++++++ +. +||+||+++..|+++...+.. ++..|++++++|. +
T Consensus 49 ~~~lE~~la~leg~~~--~v~~ssG~~Ai~~~l~al-l~--~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~~d~e 122 (397)
T PRK05939 49 TAALEAKITKMEGGVG--TVCFATGMAAIAAVFLTL-LR--AGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDATDVQ 122 (397)
T ss_pred HHHHHHHHHHHhCCCe--EEEeCCHHHHHHHHHHHH-cC--CCCEEEECCCccccHHHHHHH-HHhcCCEEEEECCCCHH
Confidence 4457789999999876 677888898888777665 33 899999999999988777655 3568999999875 4
Q ss_pred hhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccc
Q 001579 290 DIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGV 361 (1050)
Q Consensus 290 ~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~ 361 (1050)
++++ ++++|++|++.+| |.+|.+.|+++|+++||++|++++|+. .++.+....|.++|+|+++.|. |.|++
T Consensus 123 ~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~-t~a~~~~~~~~~~gaDivv~S~sK~~~g 196 (397)
T PRK05939 123 NVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDN-TMTSPWLFRPKDVGASLVINSLSKYIAG 196 (397)
T ss_pred HHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEEC-CcccccccCccccCCEEEEecCeecccC
Confidence 5666 7889999999887 789999999999999999999999943 4444544567789999999998 87764
No 446
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.49 E-value=8.2e-12 Score=146.72 Aligned_cols=307 Identities=11% Similarity=0.114 Sum_probs=185.4
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--ee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE
Q 001579 627 AQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK 703 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~d--~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~ 703 (1050)
.+|..++...+.+++.+..|.+ .. .+..++|++. +..++++++. .+++.|++++..+..+...+.+.|.+
T Consensus 70 ~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~--al~~~~~~l~-----~~gd~Vlv~~P~y~~~~~~~~~~g~~ 142 (403)
T PRK08636 70 SKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKE--GYVHLVQAIT-----NPGDVAIVPDPAYPIHSQAFILAGGN 142 (403)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHH--HHHHHHHHhC-----CCCCEEEEcCCCCcchHHHHHhcCCE
Confidence 3687777777888887777754 33 3555566542 2233344331 25689999998777777778899999
Q ss_pred EEEEcCC--CCCCCCHHHH----HHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccc-cc
Q 001579 704 IVSVGTD--AKGNINIEEL----RKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQ 773 (1050)
Q Consensus 704 vv~V~~d--~~g~iD~e~L----~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al 773 (1050)
++.|+++ .+..+|+++| +++++++..+++++++++| |.+|.+- +.+++|.++|+++++++++|.++.. ..
T Consensus 143 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~ 222 (403)
T PRK08636 143 VHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITF 222 (403)
T ss_pred EEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhcc
Confidence 9999875 3357888754 6666555578999999998 5788774 3589999999999999999998632 11
Q ss_pred cccCCC--Ccc--cCc--EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchh
Q 001579 774 VGLTSP--GYI--GAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1050)
Q Consensus 774 ~gl~~p--g~~--GaD--v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~ 847 (1050)
.+...| ..+ ..| |.+.++.|+|+.| |.++|+++.++++...+... .. ....+.++ .
T Consensus 223 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~iv~~~~li~~~~~~-~~-----------~~~~~~~~--~ 284 (403)
T PRK08636 223 DGYKTPSILEVEGAKDVAVESYTLSKSYNMA----GWRVGFVVGNKKLVGALKKI-KS-----------WLDYGMFT--P 284 (403)
T ss_pred CCCCCCChhcCCCccccEEEEEecccccCCc----cceeeeeeCCHHHHHHHHHH-HH-----------HhcccCCh--H
Confidence 121111 111 123 3456788988654 78999999877665443210 00 00001111 1
Q ss_pred hhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHH
Q 001579 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1050)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakr 926 (1050)
.+. +++ .++. -..+-+++..+....+.+++.+.|++. +.+. .+.+..+ +.+++++.. .+.+..++++.
T Consensus 285 ~q~---~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~p~~g~~--~~~~l~~~~--~~~~~~~l~~~ 353 (403)
T PRK08636 285 IQV---AAT-IALD-GDQSCVEEIRETYRKRRDVLIESFANAGWELQ--KPRASMF--VWAKIPEPA--RHLGSLEFSKQ 353 (403)
T ss_pred HHH---HHH-HHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCcceE--EEEECCCcc--CCCCHHHHHHH
Confidence 121 111 1121 123345555566667778888888874 3322 1222221 456664210 12346788877
Q ss_pred HH-HCCcccC-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 927 LM-DYGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 927 L~-d~Gi~~~-~~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
|. ++||.+. ...|. ..+.+||++. .+.+++++.++.|+++++.
T Consensus 354 ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 354 LLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred HHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 55 6899863 33343 2478999986 4567777777666666543
No 447
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.49 E-value=8.8e-12 Score=142.14 Aligned_cols=297 Identities=19% Similarity=0.189 Sum_probs=187.9
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHH---HhCCCEEEEEcCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATA---AMCGMKIVSVGTD 710 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a---~~~G~~vv~V~~d 710 (1050)
..++++++++.+|...+ +..+||+.|...+|+++ |.+++|+||+|.- |+.+++ .+.|.++|+|++|
T Consensus 36 v~~FE~~~ae~~G~k~a-va~~sgT~AL~laL~al-------~ig~GDeVI~ps~---TfvATan~i~~~Ga~PVFvDid 104 (374)
T COG0399 36 VRRFEQAFAEYLGVKYA-VAVSSGTAALHLALLAL-------AIGPGDEVIVPSF---TFVATANAVLLVGAKPVFVDID 104 (374)
T ss_pred HHHHHHHHHHHhCCCeE-EEecChHHHHHHHHHhc-------CCCCCCEEEecCC---chHHHHHHHHHcCCeEEEEecC
Confidence 55889999999999976 45567776554333321 2457899999875 677764 4699999999999
Q ss_pred CC-CCCCHHHHHHHHHcCCCCEEEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEecccccccccc-CCCCcccCcEEE
Q 001579 711 AK-GNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGL-TSPGYIGADVCH 788 (1050)
Q Consensus 711 ~~-g~iD~e~L~~~i~~~~~~taaV~vt~Pn~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl-~~pg~~GaDv~~ 788 (1050)
++ +++|++.|+++|+ ++|++||.. ..+|..- |+++|.++|++||++|+-|+||..+..-- ...|.+| |+.+
T Consensus 105 ~~T~nid~~~ie~aIt---~~tKAIipV--hl~G~~~-dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~G-d~~~ 177 (374)
T COG0399 105 PDTLNIDPDLIEAAIT---PRTKAIIPV--HLAGQPC-DMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFG-DIGA 177 (374)
T ss_pred CcccCCCHHHHHHHcc---cCCeEEEEe--hhccCCC-CHHHHHHHHHHcCCeEEEEcchhccCeecCccccccc-ceEE
Confidence 77 9999999999998 789999985 4778886 89999999999999999999975332211 2335554 5666
Q ss_pred eCCccccccCCCCCCCcceeeeecc-cccCC---CCCCccccCCC---CCCCCCCCCC-CCCCcchhhhHHHHHHHHHHH
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPF---LPSHPVVSTGG---IPAPEKSQPL-GTIAAAPWGSALILPISYTYI 860 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~---lpg~~vg~~~~---~~~~~~~~~t-~~i~sa~~g~~~~~~~a~a~l 860 (1050)
+|+|-+=.++.| -.|.+.+++ ++++. +..+ |...+ .+.+.. -+. ..++ -..+++.++-|
T Consensus 178 fSF~~~K~ittg----EGGav~tnd~ela~k~~~lr~h--G~~~~~~~~y~~~~-~G~N~rm~------~iqAAigl~QL 244 (374)
T COG0399 178 FSFHATKNLTTG----EGGAVVTNDEELAEKARSLRNH--GLSRDAVFKYLHEE-LGYNYRLT------EIQAAIGLAQL 244 (374)
T ss_pred EEecCCCCcccc----CceEEEeCCHHHHHHHHHHHHh--CcCCCccccceeee-cccccCHH------HHHHHHHHHHH
Confidence 665443332333 236888875 34433 2211 11110 000000 000 1111 11222333333
Q ss_pred HHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCC-CccceeEEEecccccccCCCCHHHHHHHHHHCCccc---
Q 001579 861 AMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVN-GTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG--- 934 (1050)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~-g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~--- 934 (1050)
. .+.+..++...++++..+.|++. +.+...... ....|.+.+-+++ .+.+-+.+.+.|.+.|+-.
T Consensus 245 ~-----~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~----~~~~R~~l~~~L~~~gi~~~~~ 315 (374)
T COG0399 245 E-----RLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDE----EGISRDALMESLKEAGVGAVVY 315 (374)
T ss_pred H-----HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecC----CCCCHHHHHHHHHhCCCCceEE
Confidence 3 34455555667788888888875 233222111 1335656665542 1467789999999997652
Q ss_pred -CCC---------------CCCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 935 -PTM---------------SWPV-----PGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 935 -~~~---------------~~pv-----~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
..+ .+|+ ...|.+-.....+.+|+++.+++|++++.
T Consensus 316 ~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 316 FRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred eeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 111 1232 24677777778899999999999998865
No 448
>PRK09265 aminotransferase AlaT; Validated
Probab=99.49 E-value=9.3e-12 Score=146.29 Aligned_cols=301 Identities=13% Similarity=0.070 Sum_probs=172.1
Q ss_pred ccHHHHHHHHHHHHHHhh------CCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCC
Q 001579 628 QGYQEMFNNLGEWLCTIT------GFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 701 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~------G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G 701 (1050)
+|..+ +++.+++.+ +.+...+..++|++. +..++++.+. .++++|++++..|+.....+...|
T Consensus 72 ~G~~~----lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~--~l~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~g 140 (404)
T PRK09265 72 KGLFS----ARKAIMQYYQQKGIPDVDVDDIYIGNGVSE--LIVMAMQALL-----NNGDEVLVPAPDYPLWTAAVSLSG 140 (404)
T ss_pred CCcHH----HHHHHHHHHhccCCCCCCcccEEEeCChHH--HHHHHHHHhC-----CCCCEEEEeCCCCcChHHHHHHcC
Confidence 56444 444555544 455545555556542 2233344331 246789999988877777788899
Q ss_pred CEEEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccc-cc
Q 001579 702 MKIVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQ-VG 775 (1050)
Q Consensus 702 ~~vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al-~g 775 (1050)
.+++.++++.+ +.+|+++|+++++ +++++|++++| |.+|.+. +++++|+++|+++|+++++|.++..-. .+
T Consensus 141 ~~~v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~ 217 (404)
T PRK09265 141 GKPVHYLCDEEAGWFPDLDDIRSKIT---PRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDG 217 (404)
T ss_pred CEEEEEecccccCCCCCHHHHHHhcc---ccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCC
Confidence 99999987643 5799999999986 67899999999 4789875 239999999999999999998753211 11
Q ss_pred --cCCCCcc--cCcE-EEeCCccccccCCCCCCCcceeeeec--ccc----cCCCCCCccccCCCCCCCCCCCCCCCCCc
Q 001579 776 --LTSPGYI--GADV-CHLNLHKTFCIPHGGGGPGMGPIGVK--KHL----APFLPSHPVVSTGGIPAPEKSQPLGTIAA 844 (1050)
Q Consensus 776 --l~~pg~~--GaDv-~~~~~hKtf~~P~g~GGPg~G~i~v~--~~l----~~~lpg~~vg~~~~~~~~~~~~~t~~i~s 844 (1050)
......+ ...+ ++.++.|+|++| |.++|++++. +.+ ...+. ... ....+++
T Consensus 218 ~~~~~~~~~~~~~~vi~~~S~SK~~~~p----GlRiG~~v~~~~~~~~~~~~~~~~--~~~-----------~~~~~~~- 279 (404)
T PRK09265 218 AVHISIASLAPDLLCVTFNGLSKAYRVA----GFRVGWMVLSGPKKHAKGYIEGLD--MLA-----------SMRLCAN- 279 (404)
T ss_pred CCcCCHHHcCCCceEEEEecchhhccCc----ccceEEEEEeCchHHHHHHHHHHH--HHh-----------ccccCCC-
Confidence 0011111 1123 346678888644 6789999863 221 11110 000 0001111
Q ss_pred chhhhHHHHHHHHHHHHHHChhhHHHH---HHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHH
Q 001579 845 APWGSALILPISYTYIAMMGSKGLTEA---SKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPE 921 (1050)
Q Consensus 845 a~~g~~~~~~~a~a~l~~lG~eGl~~~---a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~ 921 (1050)
..++.. +.+++. ..+.+.+. .+...++.+++.+.|+++..+.+..+.+..+ +.++++........+.+
T Consensus 280 -~~~q~~----~~~~l~--~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~--l~~~~~~~~~~~~~~~~ 350 (404)
T PRK09265 280 -VPAQHA----IQTALG--GYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALY--AFPKLDPKVYPIHDDEQ 350 (404)
T ss_pred -cHHHHH----HHHHhc--CchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceE--EEEEecccccCCCCHHH
Confidence 112221 112221 11112222 2344456777888887641222222222221 34455320000001234
Q ss_pred HHHHHHHHCCcccC-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 922 DVAKRLMDYGFHGP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 922 ~vakrL~d~Gi~~~-~~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
.+.+.|.++|+.+. ...|+ -++.+|+++. .+.+++++.++.|+++++.
T Consensus 351 ~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 351 FVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL--PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred HHHHHHHhCCEEEECchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHHHHHHH
Confidence 56677889999863 33342 3578999984 5788999999998887754
No 449
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.49 E-value=2e-12 Score=150.21 Aligned_cols=218 Identities=17% Similarity=0.124 Sum_probs=150.7
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEEEEEc
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVG 708 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~vv~V~ 708 (1050)
....+++.++.+-|.+.. +...+|..|..++++++. .++|+||++...++.+.. .++..|++++.++
T Consensus 65 t~~~Le~~la~le~~~~~-v~~sSG~aAi~~~l~all--------~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd 135 (395)
T PRK05967 65 TTDALCKAIDALEGSAGT-ILVPSGLAAVTVPFLGFL--------SPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYD 135 (395)
T ss_pred HHHHHHHHHHHHhCCCCE-EEECcHHHHHHHHHHHhc--------CCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeC
Confidence 355788899988876654 455567766654444331 256899999887766543 2467899999986
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEE
Q 001579 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVC 787 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~ 787 (1050)
.+ +.+.++++++ ++|++|++++| |..+.+. ||++|+++||++|++++||.+.. -..+.+|-++|+|++
T Consensus 136 ~~-----~~e~l~~al~---~~TklV~lesPsNP~l~v~-dl~~I~~la~~~g~~vvVD~t~a--~p~~~~pl~~GaDiv 204 (395)
T PRK05967 136 PE-----IGAGIAKLMR---PNTKVVHTEAPGSNTFEMQ-DIPAIAEAAHRHGAIVMMDNTWA--TPLYFRPLDFGVDIS 204 (395)
T ss_pred CC-----CHHHHHHhcC---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHhCCEEEEECCcc--CceecChhHcCCCEE
Confidence 42 4578999997 78999999998 5678777 89999999999999999998753 234568999999999
Q ss_pred EeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 788 ~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
+.++.|+++ |.|.--+|.++.++++...+.- . . ...+..-+ |+ -+|+...|-+-
T Consensus 205 v~S~tKy~~---Gh~d~~~G~v~~~~~~~~~l~~-~-----------~-~~~G~~~~-p~---------da~l~~rgl~T 258 (395)
T PRK05967 205 IHAATKYPS---GHSDILLGTVSANEKCWPQLLE-A-----------H-GTLGLCAG-PD---------DTYQILRGLRT 258 (395)
T ss_pred EEecccccC---CCCCeeEEEEEcCHHHHHHHHH-H-----------H-HHcCCCCC-HH---------HHHHHHcCccc
Confidence 999999864 2222346766666543322210 0 0 01122111 21 23456667777
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeecC
Q 001579 868 LTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~~---~v~~~g 896 (1050)
|.-+.++..+||..+++.|+++. .|.|+|
T Consensus 259 l~lR~~~~~~na~~lA~~L~~hp~v~~V~yPg 290 (395)
T PRK05967 259 MGIRLEHHRKSALEIARWLEGRPDVARVLHPA 290 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcEEECCC
Confidence 77778888899999999999862 456665
No 450
>PLN02271 serine hydroxymethyltransferase
Probab=99.49 E-value=2.7e-12 Score=151.10 Aligned_cols=291 Identities=12% Similarity=0.028 Sum_probs=186.0
Q ss_pred HHHHHHHhcCCCC----cceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHH-----HhccCCCeEEEEc
Q 001579 216 FQTMIADLTGLPM----SNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICI-----TRADGFDIKVVVS 286 (1050)
Q Consensus 216 ~q~~ia~L~G~~~----anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~-----~~a~~~gi~v~~~ 286 (1050)
.++...+|+|++. +|+-.+ +|+.|..++.+|+ +. +||+|+..+..|...+.... ..+...|+.+..+
T Consensus 199 a~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~AL-l~--PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~v 274 (586)
T PLN02271 199 CCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGL-LL--PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESL 274 (586)
T ss_pred HHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHh-cC--CCCEEEEecCCCCCchhcccccccccccccccceEEEE
Confidence 4567888999887 777666 6777778888876 33 89999999888876654321 1123345444443
Q ss_pred -----------Cchhhhc--cCCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC-----CCCCccc
Q 001579 287 -----------DLKDIDY--KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL-----KPPGELG 348 (1050)
Q Consensus 287 -----------~~~~l~~--l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l-----~~pg~~G 348 (1050)
|++++++ ...++++|++....+. ...|+++|.++|+++|++++|++ .+..|++ ..|.. +
T Consensus 275 pY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp-r~~D~~~i~eIAdevGA~LmvD~-AH~aGLIa~g~~~sP~~-~ 351 (586)
T PLN02271 275 PYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP-REWDYARFRQIADKCGAVLMCDM-AHISGLVAAKECVNPFD-Y 351 (586)
T ss_pred EcccccccCccCHHHHHHHhhhcCCeEEEECchhcc-CcCCHHHHHHHHHHcCCEEEEEC-cccccccccCcCCCCCc-C
Confidence 3345655 4578998888665444 66799999999999999999942 2344443 23433 6
Q ss_pred ceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHH
Q 001579 349 ADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALL 427 (1050)
Q Consensus 349 aDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~ 427 (1050)
|||+.+++ |+|.+|. .|+++++++....+.|...+++.+.. .+.+.-.+ .+.-.=..+.|+.|. .+.
T Consensus 352 aDvvt~TTHKtLrGPr------GG~I~~r~~~~~~~~g~~gs~s~~~~-~~d~~~kI-~~aVfPglqgGphn~----~IA 419 (586)
T PLN02271 352 CDIVTSTTHKSLRGPR------GGIIFYRKGPKLRKQGMLLSHGDDNS-HYDFEEKI-NFAVFPSLQGGPHNN----HIA 419 (586)
T ss_pred CcEEEeCCcccCCCCC------ceEEEecccccccccCCccccccccc-cHHHHHHh-hcccCCccccChhHH----HHH
Confidence 99999999 8776554 46788888766656666555543210 00000000 000000223344442 344
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCccEEEEecCC----HHHHHHHHHHcCceeee-
Q 001579 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD----AHAIASAAYKIEMNLRV- 501 (1050)
Q Consensus 428 a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~~~~~v~i~~~~----~~~i~~~L~~~GI~~~~- 501 (1050)
|+..++ .+......++-++++.++|+.|++.|.+.| ++++.. ..-+.+.+++.. ...+.+.|.+.||.+..
T Consensus 420 alAval--kea~~~efk~Ya~QVv~NAkaLA~~L~~~G-~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn 496 (586)
T PLN02271 420 ALAIAL--KQVATPEYKAYMQQVKKNAQALASALLRRK-CRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKT 496 (586)
T ss_pred HHHHHH--HHHhChHHHHHHHHHHHHHHHHHHHHHHCC-CeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccc
Confidence 444444 233334558899999999999999999998 999842 333456666542 67777888888997643
Q ss_pred --------ecCCeEEEEeccCCCH----HHHHHHHHHHh
Q 001579 502 --------VDSNTVTASFDETTTL----EDVDKLFIVFA 528 (1050)
Q Consensus 502 --------~~~~~lris~~e~~t~----edId~lv~~l~ 528 (1050)
..++.|||...+.|++ +|++.+.+.+.
T Consensus 497 ~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~ 535 (586)
T PLN02271 497 AIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLL 535 (586)
T ss_pred cCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHH
Confidence 2356799998887653 67776666554
No 451
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.48 E-value=4.9e-12 Score=147.12 Aligned_cols=286 Identities=14% Similarity=0.115 Sum_probs=168.6
Q ss_pred HHHHHHHHhhC--------CCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEE
Q 001579 636 NLGEWLCTITG--------FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (1050)
Q Consensus 636 el~~~lael~G--------~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V 707 (1050)
++++.+++.++ .+..++..++|++.- ..+++.+.. ..| .++|+++...+..+...+++.|++++.+
T Consensus 70 ~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a--l~~~~~~~~-~~g---~~~Vlv~~P~y~~~~~~~~~~g~~~~~~ 143 (374)
T PRK02610 70 ALKQAIAEYVNESAAGSSQITPANISVGNGSDEL--IRSLLIATC-LGG---EGSILVAEPTFSMYGILAQTLGIPVVRV 143 (374)
T ss_pred HHHHHHHHHhCccccccCCCCHHHEEEcCChHHH--HHHHHHHHc-CCC---CCeEEEcCCChHHHHHHHHHcCCEEEEe
Confidence 44555555554 444456666666532 212222211 122 2378998886666666688999999999
Q ss_pred cCCCC-CCCCHHHHHHHHHcC-CCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc
Q 001579 708 GTDAK-GNINIEELRKAAEAN-RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI 782 (1050)
Q Consensus 708 ~~d~~-g~iD~e~L~~~i~~~-~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~ 782 (1050)
+.+++ ..+|+++|+++++++ ..++++|++++| |.+|.+. +.+++|.+++ +|+++++|.++.. +.....+...
T Consensus 144 ~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~-~~~~~~~~~~ 220 (374)
T PRK02610 144 GRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFE-FSQTTLVGEL 220 (374)
T ss_pred cCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccc-cCccchHHHH
Confidence 98764 679999999998731 147899999999 4789875 2355555554 4899999998632 1111111111
Q ss_pred -cC-c-EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHH
Q 001579 783 -GA-D-VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1050)
Q Consensus 783 -Ga-D-v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~ 859 (1050)
.. . |++.++.|+|++| |.++|++++++++.+.+-.. +...+++ .+.+.. +.++
T Consensus 221 ~~~~~~ivi~SfSK~~g~~----GlRiG~~v~~~~l~~~l~~~--------------~~~~~~~--~~~q~a----~~~~ 276 (374)
T PRK02610 221 AQHPNWVILRTFSKAFRLA----AHRVGYAIGHPELIAVLEKV--------------RLPYNLP--SFSQLA----AQLA 276 (374)
T ss_pred hcCCCEEEEEecchhccCc----ccceeeeecCHHHHHHHHHh--------------cCCCCCC--HHHHHH----HHHH
Confidence 11 2 5667788988654 78999999887765543210 0001111 122221 1222
Q ss_pred HHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCC
Q 001579 860 IAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1050)
Q Consensus 860 l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~ 939 (1050)
+. ..+.+.+..+...+..+.+.+.|+++..+... +.+..+ +.++++ .+.+..++.++|.++|+.+...
T Consensus 277 l~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p~~g~f--~~~~l~-----~~~~~~~~~~~l~~~gi~v~~~-- 344 (374)
T PRK02610 277 LE--HRQELLAAIPEILQERDRLYQALQELPQLRVW-PSAANF--LYLRLS-----QDAALAALHQALKAQGTLVRHT-- 344 (374)
T ss_pred hc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-CCcceE--EEEeCC-----CCCCHHHHHHHHHHCCEEEEeC--
Confidence 21 12333333344455566777777664222111 122121 445654 2356789999999999987532
Q ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 940 PVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 940 pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
.+.+||++. +.++++++++.|++++..
T Consensus 345 --~~~lRls~~---~~~~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 345 --GGGLRITIG---TPEENQRTLERLQAALTQ 371 (374)
T ss_pred --CCeEEEeCC---CHHHHHHHHHHHHHHHhh
Confidence 478999986 357789988888877643
No 452
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.48 E-value=5.4e-13 Score=142.07 Aligned_cols=286 Identities=18% Similarity=0.218 Sum_probs=180.7
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH---HHHhCCCEEEEEcCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA---TAAMCGMKIVSVGTDA 711 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa---~a~~~G~~vv~V~~d~ 711 (1050)
.+|++.+++++|-++. ++..||+.|+ +++|+.....| +.+||+.+-+|-.... .+.+.|+.++.|...+
T Consensus 59 ~rLE~~vA~l~GKEAg-LFv~SGTmgN---llaIm~Hc~~r----g~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~ 130 (384)
T KOG1368|consen 59 NRLEQRVAELFGKEAG-LFVPSGTMGN---LLAIMVHCHQR----GSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEN 130 (384)
T ss_pred HHHHHHHHHHhCccce-eeeccccccc---HHHHHHHhcCC----CceEEeccchheeehhccChhhhccceeEeeeeCC
Confidence 3788899999998876 5567888887 45566543334 4688998888854332 3678899999999888
Q ss_pred CCCCCHHHHHHHHHc-----CCCCEEEEEEEcC-CCcc-ccc--cCHHHHHHHHHHcCCEEEEeccc-cccccccCCCC-
Q 001579 712 KGNINIEELRKAAEA-----NRDNLSTLMVTYP-STHG-VYE--EGIDEICKIIHDNGGQVYMDGAN-MNAQVGLTSPG- 780 (1050)
Q Consensus 712 ~g~iD~e~L~~~i~~-----~~~~taaV~vt~P-n~~G-v~~--~di~eI~~la~~~G~~v~vD~A~-~~al~gl~~pg- 780 (1050)
||.+|++++++++.- |.+-|++|.+++. +..| .+. +.+.+|.++|+++|+.+|+|||. +|+.+...-|-
T Consensus 131 dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk 210 (384)
T KOG1368|consen 131 DGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVK 210 (384)
T ss_pred CCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHH
Confidence 999999999999974 3356899999886 3334 543 25777888999999999999986 34443333342
Q ss_pred cc--cCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCC-CCCCcchhhhHHHHHHHH
Q 001579 781 YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPL-GTIAAAPWGSALILPISY 857 (1050)
Q Consensus 781 ~~--GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t-~~i~sa~~g~~~~~~~a~ 857 (1050)
++ -+|.+...+.|.++.|.| .+|+.+++++.+.. .+ | |+. +++. |.+++++|.
T Consensus 211 ~i~~~fDSVsiCLSKglgAPVG------SViVG~k~FI~kA~--~~----------R-KalGGGmR-----QsGvLaaaa 266 (384)
T KOG1368|consen 211 KICSAFDSVSICLSKGLGAPVG------SVIVGSKDFIDKAR--HF----------R-KALGGGMR-----QSGVLAAAA 266 (384)
T ss_pred HHHHhhhhhhhhhhccCCCCcc------cEEEccHHHHHHHH--HH----------H-HHhcCchh-----HHHHHHHHH
Confidence 22 478888888898865532 34444444433210 00 0 111 1222 333332222
Q ss_pred HHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccC
Q 001579 858 TYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGP 935 (1050)
Q Consensus 858 a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~ 935 (1050)
+..+. +.+. ..+..++.|+.|++.+... +++-.+. ...+.+.+.+. ..+++++++.+.|.++|+.+-
T Consensus 267 --Lval~-~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a---~etNiv~~~l~----q~~~~~~~l~~~~~k~gi~lm 335 (384)
T KOG1368|consen 267 --LVALD-ENVP-LLRADHKRAKELAEYINTPEEIRVEVPA---VETNIVNMVLC----QARLTAEELCKFLEKNGILLM 335 (384)
T ss_pred --HHHhh-cchH-HHHHHHHHHHHHHHHhccccceeeecch---hhcceeeeecc----cccCCHHHHHHHHHHCCeEEe
Confidence 22221 2233 2234456677777777653 2221110 01111112221 246889999999999999864
Q ss_pred CCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 936 TMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 936 ~~~~pv~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
+.. ...+||.++...|.++++..+..+.
T Consensus 336 ~~~---s~r~Rivlh~Qvt~~~ve~~~~~~~ 363 (384)
T KOG1368|consen 336 GGA---SRRIRIVLHHQVTDEDVEYVKSVLS 363 (384)
T ss_pred ecc---ccceEEEEEEecCHHHHHHHHHHHH
Confidence 321 2358999999999999999998884
No 453
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.48 E-value=7.1e-12 Score=147.77 Aligned_cols=156 Identities=19% Similarity=0.192 Sum_probs=117.8
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCcc-HH---HHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTN-PA---TAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~-pa---~a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|+.+..++++++. . ++++||++...|+.. .. .+...|++++.++.
T Consensus 59 ~~~le~~lA~l~g~~~~-v~~~sG~~Ai~~al~~l~----~----~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 59 TDVLEQRIAALEGGVAA-LAVASGQAAITYAILNLA----Q----AGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred HHHHHHHHHHHhCCCeE-EEEccHHHHHHHHHHHHh----C----CCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence 45889999999998654 566788876655554432 2 457888877655432 22 24568999999885
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+ |+++++++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++.. +.+..|.++|+|+++
T Consensus 130 ~-----d~~~l~~~l~---~~t~~V~le~p~NPtg~v~-dl~~I~~la~~~~i~livD~t~~~--~~~~~~l~~g~Divv 198 (418)
T TIGR01326 130 D-----DPEEFEKAID---ENTKAVFAETIGNPAINVP-DIEAIAEVAHAHGVPLIVDNTFAT--PYLCRPIDHGADIVV 198 (418)
T ss_pred C-----CHHHHHHhcC---cCCeEEEEECCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCch--hhcCCchhcCCeEEE
Confidence 2 8999999996 78999999998 5788887 899999999999999999998642 234567778999999
Q ss_pred eCCccccccCCCCCCCcceeeeecc
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKK 813 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~ 813 (1050)
.+++|+|+. .|..+|.+++++
T Consensus 199 ~S~sK~l~g----~G~~lGg~v~~~ 219 (418)
T TIGR01326 199 HSATKYIGG----HGTAIGGVIVDG 219 (418)
T ss_pred ECccccccC----CccceEEEEEec
Confidence 999999952 245577777653
No 454
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.48 E-value=6.4e-12 Score=145.81 Aligned_cols=211 Identities=17% Similarity=0.112 Sum_probs=147.5
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhh
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDID 292 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~ 292 (1050)
..+|++.++++.|.+. +..+.+||+|+.++++++ +. +||+||++...+..+...+...+..+|++++++|+++.+
T Consensus 66 ~~~lE~~la~leg~~~--av~~sSG~aAi~~al~al-l~--~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~ 140 (384)
T PRK06434 66 VQAFEEKYAVLENAEH--ALSFSSGMGAITSAILSL-IK--KGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLN 140 (384)
T ss_pred HHHHHHHHHHHhCCCc--EEEeCCHHHHHHHHHHHH-hC--CCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChh
Confidence 3457789999999875 778999999988887765 33 899999998887777766655566789999999986543
Q ss_pred c--cCC-CeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 293 Y--KSG-DVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 293 ~--l~~-~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
. +++ ++++|+++.| |.++.+.|+++|+++||++| ++|+ ..++.+....|-.+|+|++++|+ |.+++|-.
T Consensus 141 ~~~l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD-~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d--- 214 (384)
T PRK06434 141 SLDFDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVD-ATFASPYNQNPLDLGADVVIHSATKYISGHSD--- 214 (384)
T ss_pred heeecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEE-CCCCCcccCCchhcCCCEEEeecccccCCCCC---
Confidence 3 555 6999999987 68899999999999999998 4563 34455556667789999999998 77764321
Q ss_pred cceEEEEEeh-hhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHH
Q 001579 368 PHAAFLATSQ-EYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTI 446 (1050)
Q Consensus 368 P~~G~la~~~-~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~i 446 (1050)
--+|.+.+++ ++..++- ..|+..|.. . .+ ..|+ +...|-+-|..+
T Consensus 215 ~~gG~vv~~~~~~~~~~~-------------------------~~~~~~G~~-~---~~---~~A~--l~~~gL~tL~~R 260 (384)
T PRK06434 215 VVMGVAGTNNKSIFNNLV-------------------------ERRKTLGSN-P---DP---IQAY--LALRGLKTLGLR 260 (384)
T ss_pred ceEEEEecCcHHHHHHHH-------------------------HHHHhcCCC-C---CH---HHHH--HHHhCCCcHHHH
Confidence 1146666643 3322220 001111100 0 11 1222 245556667778
Q ss_pred HHHHHHHHHHHHHHHhcCCCEE
Q 001579 447 AQRVHGLAGTFALGLKKLGTVE 468 (1050)
Q Consensus 447 a~~~~~~a~~l~~~L~~~G~~~ 468 (1050)
.++..+++..+++.|++.+.++
T Consensus 261 ~~r~~~~a~~~a~~L~~~p~v~ 282 (384)
T PRK06434 261 MEKHNKNGMELARFLRDSKKIS 282 (384)
T ss_pred HHHHHHHHHHHHHHHHcCCCcc
Confidence 8888999999999999875443
No 455
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.48 E-value=4.1e-12 Score=148.08 Aligned_cols=289 Identities=14% Similarity=0.111 Sum_probs=179.0
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc----
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 288 (1050)
..++++.+++++|.+. +..+.+||++...++.++... +||+|+++...|+++...++ ..|++++.+|+
T Consensus 31 ~~~le~~la~~~g~~~--~v~~~sgt~al~~~l~al~~~--~Gd~Viv~~~~~~~~~~~~~----~~G~~~~~~~~~~~~ 102 (380)
T TIGR03588 31 VPAFEEALAEYVGAKY--AVAFNSATSALHIACLALGVG--PGDRVWTTPITFVATANCAL----YCGAKVDFVDIDPDT 102 (380)
T ss_pred HHHHHHHHHHHHCCCe--EEEEcCHHHHHHHHHHHcCCC--CCCEEEeCCcchHHHHHHHH----HcCCEEEEEecCCCc
Confidence 3457889999999864 556778888877766665333 78999999999998887754 35788887755
Q ss_pred -----hhhhc-cC----CCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccc----eEEEe
Q 001579 289 -----KDIDY-KS----GDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGA----DIVVG 354 (1050)
Q Consensus 289 -----~~l~~-l~----~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~Ga----Divvg 354 (1050)
+++++ ++ ++|++|++++ .+|...|+++|.++|+++|+++++++ .+++|.......+|. |+++.
T Consensus 103 ~~~d~~~l~~~i~~~~~~~t~~v~~~~--~~G~~~~~~~i~~l~~~~~~~lI~D~-a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 103 GNIDEDALEKKLAAAKGKLPKAIVPVD--FAGKSVDMQAIAALAKKHGLKIIEDA-SHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CCcCHHHHHHHhhcccCCCceEEEEeC--CCCccCCHHHHHHHHHHcCCEEEEEC-CCcccCccCCEeCCCccccceEEE
Confidence 34444 66 6789888776 47999999999999999999999943 456553322334555 99999
Q ss_pred cC---ccccccCCCCCcceEEEEEe-hhhhhcCCC-cEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHH
Q 001579 355 SA---QRFGVPMGYGGPHAAFLATS-QEYKRMMPG-RIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLAN 429 (1050)
Q Consensus 355 s~---k~~g~P~~~GGP~~G~la~~-~~~~r~lpg-rivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~ 429 (1050)
|+ |.++.+ .+|++.++ +++.+++.. +.-|...+.... ...+ +...+.+..+ +..+..+..+
T Consensus 180 S~~~~K~~~~~------~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~--~~~~~~~~~~--~g~n~~m~~l 245 (380)
T TIGR03588 180 SFHPVKIITTA------EGGAVTTNDEELAERMRLLRSHGITKDPLLF----EKQD--EGPWYYEQQE--LGFNYRMTDI 245 (380)
T ss_pred ecCCCCccccc------CceEEEECCHHHHHHHHHHHHCCCCCCcccc----cccc--cCcceeeeec--cccccCccHH
Confidence 96 455322 23455554 455444321 111211110000 0000 0000111111 0001111122
Q ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCC-------CccEEEEecC--C-HHHHHHHHHHcCcee
Q 001579 430 MAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLP-------FFDTVKVKCA--D-AHAIASAAYKIEMNL 499 (1050)
Q Consensus 430 ~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~-------~~~~v~i~~~--~-~~~i~~~L~~~GI~~ 499 (1050)
.|++-...+ +.++++.++-.++++++.+.|++++++++...+ ..-.+.+... . ..++.+.|.++||.+
T Consensus 246 ~aa~g~~qL--~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~ 323 (380)
T TIGR03588 246 QAALGLSQL--KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGV 323 (380)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCc
Confidence 333211111 347788888899999999999998646544221 1112333321 2 789999999999965
Q ss_pred eee-------------------------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 500 RVV-------------------------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 500 ~~~-------------------------~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+.. ....+.+.++...|++|+++++++|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~ 377 (380)
T TIGR03588 324 QVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLR 377 (380)
T ss_pred ccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHH
Confidence 311 01558899999999999999999986
No 456
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.48 E-value=1.7e-11 Score=145.04 Aligned_cols=328 Identities=16% Similarity=0.209 Sum_probs=192.6
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhCCC--eeeeccCchHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIR 669 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G~d--~~~l~~~sGa~ge~a~Llair 669 (1050)
.++|+|..++..++..+. ....+..+..+ +. +...++.+.++++++.+ ...++.+||+++++.++..+|
T Consensus 53 ~~lGh~~~~i~~a~~~~~-~~~~~~~~~~~-------~~-~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar 123 (425)
T PRK08088 53 LNTGHLHPKVVAAVEAQL-KKLSHTCFQVL-------AY-EPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIAR 123 (425)
T ss_pred cCCCCCCHHHHHHHHHHH-hhCCCcccccc-------CC-HHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHH
Confidence 467888877776655542 22112111111 01 12337888899988753 234678899999988888888
Q ss_pred HHHHhcCCCCCCEEEEcCCCCCccHHHHHhCC--------C-----EEEE--EcCCCCCCCC----HHHHHHHHH--cCC
Q 001579 670 AYHKARGDHHRNVCIIPVSAHGTNPATAAMCG--------M-----KIVS--VGTDAKGNIN----IEELRKAAE--ANR 728 (1050)
Q Consensus 670 ~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G--------~-----~vv~--V~~d~~g~iD----~e~L~~~i~--~~~ 728 (1050)
.|. | ++++|.+..++||....+....+ + .+.. +|.+.++ .+ +++|++.++ .+.
T Consensus 124 ~~~---~--r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~~~ 197 (425)
T PRK08088 124 AAT---K--RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDAAP 197 (425)
T ss_pred HHh---C--CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhccCC
Confidence 762 1 33455677889998766533211 1 1122 2322222 22 567888886 234
Q ss_pred CCEEEEEEEcC-CCccccc---cCHHHHHHHHHHcCCEEEEeccccccccccCCCCc------cc--CcEEEeCCccccc
Q 001579 729 DNLSTLMVTYP-STHGVYE---EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGY------IG--ADVCHLNLHKTFC 796 (1050)
Q Consensus 729 ~~taaV~vt~P-n~~Gv~~---~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~------~G--aDv~~~~~hKtf~ 796 (1050)
+++++|+++.. +..|.+. +.+++|.++|+++|++++.|.++. ++.++|. .+ .|+.++ .|+++
T Consensus 198 ~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~----g~g~~g~~~~~~~~~~~pdi~s~--sK~l~ 271 (425)
T PRK08088 198 EDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT----GAGRTGTLFAMEQMGVAADLTTF--AKSIA 271 (425)
T ss_pred CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc----CCCcCcchhHHhhcCCCCCEEEE--ecccc
Confidence 67887777643 2345543 249999999999999999998753 3333332 23 455444 68885
Q ss_pred cCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHH
Q 001579 797 IPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAI 876 (1050)
Q Consensus 797 ~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~ 876 (1050)
+|-.+|++++++++.+.+.... .....+ +++...+++.+++..+..+.+.+. ..
T Consensus 272 -----~G~rig~v~~~~~~~~~~~~~~--------------~~~t~~----~~~~~~~a~~~~l~~~~~~~~~~~---~~ 325 (425)
T PRK08088 272 -----GGFPLAGVTGRAEVMDAIAPGG--------------LGGTYA----GNPIACAAALAVLKVFEQENLLQK---AN 325 (425)
T ss_pred -----CCCcceeeEecHHHHhhcCCCC--------------CCCCCC----cCHHHHHHHHHHHHHHHhcCHHHH---HH
Confidence 4567999999887766553110 001111 233445556666666544443333 33
Q ss_pred HHHHHHHHHHhcc---CCee--ecCCCCccceeEEEeccc-cc--ccCCCCHHHHHHHHHHCCcccC-CCCCCCCCEEEE
Q 001579 877 LNANYMAKRLEKH---YPIL--FRGVNGTVAHEFIVDLRG-LK--NTAGIEPEDVAKRLMDYGFHGP-TMSWPVPGTLMI 947 (1050)
Q Consensus 877 ~~a~yl~~~L~~~---~~v~--~~g~~g~~~~e~i~~~~~-~~--~~~g~~~~~vakrL~d~Gi~~~-~~~~pv~~~lrI 947 (1050)
...+++.+.|+++ ++.+ ..|. |.. +.+.+.. .. ........++.+++.++|+.+. ...+ ++.+|+
T Consensus 326 ~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~---~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl 399 (425)
T PRK08088 326 ALGEKLKDGLLAIAEKHPEIGDVRGL-GAM---IAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRI 399 (425)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEecc-ceE---EEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEE
Confidence 4455666666543 3321 1222 322 3344310 00 0011235678899999997753 2223 478999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 948 EPTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 948 ~~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
+|+...|++|||+.++.|.++++.+
T Consensus 400 ~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 400 LVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred ECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999988754
No 457
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.47 E-value=2.9e-12 Score=149.31 Aligned_cols=217 Identities=17% Similarity=0.197 Sum_probs=143.3
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-H---HhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-A---AMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~-a---~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+. .+..++|.++...++.+ .. .++++|+++...|+.+... . ...|++++.++
T Consensus 54 ~~~L~~~lA~l~g~~~-~i~~~sg~~Ai~~~l~~---l~-----~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd- 123 (386)
T PRK08045 54 RDVVQRALAELEGGAG-AVLTNTGMSAIHLVTTV---FL-----KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD- 123 (386)
T ss_pred HHHHHHHHHHHhCCCe-EEEECCHHHHHHHHHHH---Hc-----CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-
Confidence 4578899999999764 35566776655333332 21 2467899988766633222 2 23456777664
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
..|+++++++++ +++++|++++|+ .+|.+. |+++|+++||++|+++++|+++... ....|-++|+|+++
T Consensus 124 ----~~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~-di~~I~~ia~~~g~~vivDeay~~~--~~~~pl~~gaDivv 193 (386)
T PRK08045 124 ----QGDEQALRAALA---EKPKLVLVESPSNPLLRVV-DIAKICHLAREAGAVSVVDNTFLSP--ALQNPLALGADLVL 193 (386)
T ss_pred ----CCCHHHHHHhcc---cCCeEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCCcc--ccCCchhhCCCEEE
Confidence 268999999997 689999999995 789887 7999999999999999999986432 23567788999999
Q ss_pred eCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.++||+++.+ ++--.|.++++ +++...+. .. + ..+ ..+.++. .+| +...|-+-
T Consensus 194 ~S~tK~l~G~---~d~~~G~vi~~~~~~~~~l~-----~~-------~-~~~-g~~~~p~-------~~~--l~~rgl~t 247 (386)
T PRK08045 194 HSCTKYLNGH---SDVVAGVVIAKDPDVVTELA-----WW-------A-NNI-GVTGGAF-------DSY--LLLRGLRT 247 (386)
T ss_pred eecceeccCC---CCceeEEEEeCcHHHHHHHH-----HH-------H-Hhc-CCCCCHH-------HHH--HHHhhhcc
Confidence 9999999511 11125766664 44433221 00 0 001 1111111 233 34444455
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeecC
Q 001579 868 LTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~~---~v~~~g 896 (1050)
+....++..+|+..+++.|+++. .|.|+|
T Consensus 248 l~~R~~~~~~na~~la~~L~~~p~v~~V~yp~ 279 (386)
T PRK08045 248 LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPS 279 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCC
Confidence 77777888899999999999862 455665
No 458
>PRK06460 hypothetical protein; Provisional
Probab=99.47 E-value=7.9e-12 Score=145.37 Aligned_cols=217 Identities=17% Similarity=0.177 Sum_probs=142.9
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC-ccH---HHHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNP---ATAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHg-t~p---a~a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.. +..++|.++..+++ +.+. .++++||++.+.++ ++. ..++..|++++.++.
T Consensus 47 ~~~L~~~lA~l~g~~~~-v~~~sG~~ai~~~l---~al~-----~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~ 117 (376)
T PRK06460 47 VLELTKKIVELENAEMG-VAFSSGMGAISTTA---LALL-----KPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNP 117 (376)
T ss_pred HHHHHHHHHHHhCCCcE-EEeCCHHHHHHHHH---HHHh-----CCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECC
Confidence 55889999999998764 44467765553333 3321 24578999876554 332 235678999988876
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
+ |.+.+++.++ +++++|++++| |.+|.+. |+++|+++||++|+++++|+++... ....|-.+|+|+++
T Consensus 118 ~-----~~~~l~~~~~---~~tklV~l~sp~NPtG~v~-d~~~I~~la~~~g~~vivDea~~~~--~~~~~l~~~~divv 186 (376)
T PRK06460 118 G-----SDNIIEKAKS---KRYDVVFVENITNPLLRVV-DITELSKVCKENGSILIVDATFSTP--INQKPLELGADIVV 186 (376)
T ss_pred C-----CHHHHHHhcC---CCceEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCcCcc--ccCChhhcCCCEEE
Confidence 4 2344555444 78999999999 5789887 7999999999999999999986432 12344457899999
Q ss_pred eCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhH
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1050)
.++||+|+ |.++..+|+++.++++...+... + ... +++.++ ..+| +...|.+-+
T Consensus 187 ~S~sK~l~---G~~~~~~G~~~~~~~l~~~l~~~------------~-~~~-g~~~~~-------~~a~--~~l~~~~~l 240 (376)
T PRK06460 187 HSASKFLA---GHNDVIAGLAAGYGKLLNVIDQM------------R-RTL-GTSLDP-------HAAY--LTLRGIKTL 240 (376)
T ss_pred eecceecc---CCCCceEEEEecCHHHHHHHHHH------------H-Hhc-CCCCCH-------HHHH--HHHhchhhH
Confidence 99999985 22234478888877665443100 0 000 111111 1233 333455667
Q ss_pred HHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 869 TEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 869 ~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
....++..+++.++++.|+++ -.|.|++
T Consensus 241 ~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~ 271 (376)
T PRK06460 241 KIRMDVINRNAEQIAEFLEGHPKVVKVYYPG 271 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCccEEECCC
Confidence 777788889999999999875 2345553
No 459
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.47 E-value=2.2e-11 Score=141.74 Aligned_cols=262 Identities=19% Similarity=0.247 Sum_probs=165.6
Q ss_pred eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEE-EcCCCCCccHHHHHhCCCEE---------EEEcCCCCCCCCHHH
Q 001579 650 FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCI-IPVSAHGTNPATAAMCGMKI---------VSVGTDAKGNINIEE 719 (1050)
Q Consensus 650 ~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vl-ip~saHgt~pa~a~~~G~~v---------v~V~~d~~g~iD~e~ 719 (1050)
..++.+||++++++++..+|.| . ++++|+ +..++||+....+...|.+. ..++.. -..|+++
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~---~---~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dl~~ 157 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKA---T---GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--IFNDLNS 157 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHh---c---CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--CCCCHHH
Confidence 3467789999888888777754 2 234455 56788997655543333211 111110 1248999
Q ss_pred HHHHHHcCCCCEEEEEEEcC-CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCC------c--ccCcEE
Q 001579 720 LRKAAEANRDNLSTLMVTYP-STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG------Y--IGADVC 787 (1050)
Q Consensus 720 L~~~i~~~~~~taaV~vt~P-n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg------~--~GaDv~ 787 (1050)
|+++++ +++++|+++.+ +..|++.+ .+++|.++|+++|+++++|+++. ++.+.| . ...|++
T Consensus 158 l~~~l~---~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~----g~g~~g~~~~~~~~~~~pdi~ 230 (375)
T PRK04260 158 VKALVN---KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQT----GMGRTGKLYAFEHYGIEPDIF 230 (375)
T ss_pred HHHhcC---CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh----CCCcccchhhhHhhCCCCCEE
Confidence 999886 67899999887 46688753 38999999999999999999853 232222 1 236776
Q ss_pred EeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 788 ~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
+ ++|.|+ +|-.+|++++++++.+.+... ...+. +.+++..++++.+.+..+..++
T Consensus 231 t--~sK~l~-----~G~~ig~~~~~~~~~~~~~~~--------------~~~~t----~~~~~~~~~aa~a~l~~~~~~~ 285 (375)
T PRK04260 231 T--LAKGLA-----NGVPVGAMLAKSSLGGAFGYG--------------SHGST----FGGNKLSMAAASATLDIMLTAG 285 (375)
T ss_pred E--eccccc-----CCcceEEEEEcHHHHhhcCCC--------------CCCCC----CCcCHHHHHHHHHHHHHHHhhH
Confidence 5 469774 344588999988766544210 00011 2234455666777777765555
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCe--eecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCC
Q 001579 868 LTEASKIAILNANYMAKRLEKH---YPI--LFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVP 942 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~---~~v--~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~ 942 (1050)
+.+ +..++.++++++|.+. .+. ...+ .|.. +.+++. .+...+.++|.++|+.+.... .
T Consensus 286 ~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~---~~~~~~-------~~~~~~~~~l~~~Gi~v~~~~---~ 348 (375)
T PRK04260 286 FLE---QALENGNYLQEQLQKALQDKETVTTVRG-LGYM---IGIETT-------ADLSQLVEAARDKGLIVLTAG---T 348 (375)
T ss_pred HHH---HHHHHHHHHHHHHHHHHhhCCCeeEEec-cceE---EEEEec-------CcHHHHHHHHHhCCCEEecCC---C
Confidence 443 3334556666666553 221 1111 1211 334432 246789999999999874322 3
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 943 GTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 943 ~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
+.+|++|+..++.+||+++++.|+++
T Consensus 349 ~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 349 NVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred CEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 78999999999999999999999765
No 460
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.47 E-value=6.3e-12 Score=140.79 Aligned_cols=296 Identities=19% Similarity=0.160 Sum_probs=186.7
Q ss_pred HHHHHHHHHhccccCcccccccccccccCcchh--hhh--cc-ccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC
Q 001579 572 ELLRYIHLLQSKELSLCHSMIPLGSCTMKLNAT--TEM--MP-VTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG 646 (1050)
Q Consensus 572 e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~--~~~--~~-~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G 646 (1050)
.++-.+.+++.+.... .+||-|.+..++. +-. .- +.-+.+..|++ ..|..++...|.+++++++|
T Consensus 18 ~vw~e~~~la~e~~~~----~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~------~~G~p~L~~aL~k~~se~~~ 87 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVP----NPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTR------GYGLPQLRKALAKAYSEFYG 87 (420)
T ss_pred cHHHHHHHHHHhcCCC----CcccCCCCCCCCcHHHHHHHHHHhccchhccccc------cCCchHHHHHHHHHHHHHhc
Confidence 6677777777766432 1277665544443 211 11 22223333443 34778888889999999887
Q ss_pred CCe---eeeccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCC--------CCCC
Q 001579 647 FDS---FSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--------AKGN 714 (1050)
Q Consensus 647 ~d~---~~l~~~sGa~-ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d--------~~g~ 714 (1050)
... ..+.+++|+. +.++.+++.- ..+|+|+|.+.+.-..-....|+|...+.|+.. .+..
T Consensus 88 ~~~~~~~eVlVT~GA~~ai~~~~~~l~--------~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~ 159 (420)
T KOG0257|consen 88 GLLDPDDEVLVTAGANEAISSALLGLL--------NPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWT 159 (420)
T ss_pred cccCCcccEEEecCchHHHHHHHHHHc--------CCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcccc
Confidence 542 2356666654 3333333322 256899998886544445578999999999875 2478
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccc-cccccc------CCCCcccC
Q 001579 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANM-NAQVGL------TSPGYIGA 784 (1050)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~-~al~gl------~~pg~~Ga 784 (1050)
+|.++|+.+++ ++|++|++++| |.+|-+- +.+++|+++|++||.+|+.|.++- ...-+. ..||.+.-
T Consensus 160 ~D~~~le~~~t---~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~er 236 (420)
T KOG0257|consen 160 LDPEELESKIT---EKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYER 236 (420)
T ss_pred CChHHHHhhcc---CCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhhe
Confidence 99999999998 89999999999 5788663 469999999999999999998752 111121 12888877
Q ss_pred cEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 785 DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 785 Dv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
-+-++++.|+|+ +-||.+|+++..+++...+. .+-. . ..-+|+++.-.+.+.+-+ .-+.+..
T Consensus 237 titvgS~gKtf~----~TGWrlGW~igp~~L~~~~~--~vh~----------~-~~~~~~Tp~q~A~a~a~~-~~~~~~~ 298 (420)
T KOG0257|consen 237 TITVGSFGKTFG----VTGWRLGWAIGPKHLYSALF--PVHQ----------N-FVFTCPTPIQEASAAAFA-LELACLQ 298 (420)
T ss_pred EEEeccccceee----eeeeeeeeeechHHhhhhHH--HHhh----------c-cccccCcHHHHHHHHHHh-hhhhccC
Confidence 788999999997 56999999999888776532 1100 0 011222232222111111 1111222
Q ss_pred hhh--H-HHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecc
Q 001579 865 SKG--L-TEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLR 910 (1050)
Q Consensus 865 ~eG--l-~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~ 910 (1050)
++| + .+..+...++.+.|++.|.++ +++. ++.|..+ +++|++
T Consensus 299 p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~--~p~gayy--l~adfs 344 (420)
T KOG0257|consen 299 PGGSYFITELVKEYKEKRDILAKALEELGLKVT--GPEGAYY--LWADFS 344 (420)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhcCCccc--cCCCceE--EEEecc
Confidence 332 2 235666778899999999987 5542 3334332 456765
No 461
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.47 E-value=3.2e-12 Score=150.27 Aligned_cols=298 Identities=12% Similarity=0.114 Sum_probs=172.3
Q ss_pred cccHHHHHHHHHHHHHHhhCC--Ceeeec---cCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCC
Q 001579 627 AQGYQEMFNNLGEWLCTITGF--DSFSLQ---PNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCG 701 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~--d~~~l~---~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G 701 (1050)
.+|..++.+.+.+++.+..+. +...+. ..+|.+|...++++++.+. .++++|++++..+..+...+++.|
T Consensus 71 ~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~-----~~Gd~Vlv~~P~y~~~~~~~~~~G 145 (404)
T PTZ00376 71 IEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFL-----PAGTTVYVSNPTWPNHVNIFKSAG 145 (404)
T ss_pred CCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhc-----CCCCEEEEcCCCchhHHHHHHHcC
Confidence 468766666666665443322 222232 3344444444444444432 246899999987777777789999
Q ss_pred CEEEEEcCC-C-CCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccc
Q 001579 702 MKIVSVGTD-A-KGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG 775 (1050)
Q Consensus 702 ~~vv~V~~d-~-~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al~g 775 (1050)
++++.+++. + +..+|++.++++++++.++++++++.+| |.+|.+- +.+++|+++|++||+++++|.++.. ...+
T Consensus 146 ~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~ 225 (404)
T PTZ00376 146 LNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGD 225 (404)
T ss_pred CceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCC
Confidence 999999983 2 3679999999999754455677888888 5789774 3689999999999999999987521 1111
Q ss_pred c----CCCC---cccCc-EEEeCCccccccCCCCCCCcceeee---ecccccCCCCCCccccCCCCCCCCCCCCCCCCCc
Q 001579 776 L----TSPG---YIGAD-VCHLNLHKTFCIPHGGGGPGMGPIG---VKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAA 844 (1050)
Q Consensus 776 l----~~pg---~~GaD-v~~~~~hKtf~~P~g~GGPg~G~i~---v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~s 844 (1050)
. ..+. ..+.. +++.++.|+|++| |.++|++. .++++...+-...... . .. ...+.
T Consensus 226 ~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~----GlRvG~~~~~~~~~~~~~~l~~~~~~~-~--------~~-~~~~~ 291 (404)
T PTZ00376 226 LDKDAYAIRLFAERGVEFLVAQSFSKNMGLY----GERIGALHIVCANKEEAANVLSQLKLI-I--------RP-MYSSP 291 (404)
T ss_pred HHHHHHHHHHHHhcCCcEEEEEeCCCccccc----ccccceEEEEeCCHHHHHHHHHHHHHH-H--------hh-hcCCC
Confidence 0 0000 11112 5567789999765 79999983 3444322110000000 0 00 00111
Q ss_pred chhhhHHHHHHHHHHHHHHChh--------hHHHHHHHHHHHHHHHHHHHhcc-CC--eeecCCCCccceeEEEeccccc
Q 001579 845 APWGSALILPISYTYIAMMGSK--------GLTEASKIAILNANYMAKRLEKH-YP--ILFRGVNGTVAHEFIVDLRGLK 913 (1050)
Q Consensus 845 a~~g~~~~~~~a~a~l~~lG~e--------Gl~~~a~~~~~~a~yl~~~L~~~-~~--v~~~g~~g~~~~e~i~~~~~~~ 913 (1050)
+...+. +....+... -+++..++..++.+.+.+.|++. +. ..+..++|.++ +.+++
T Consensus 292 ~~~~q~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f--~~~~~---- 358 (404)
T PTZ00376 292 PIHGAR-------IADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMF--SFTGL---- 358 (404)
T ss_pred chHHHH-------HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEE--EecCC----
Confidence 111121 111222211 13333445567788888988875 22 11111222221 12222
Q ss_pred ccCCCCHHHHHHHHHHC-CcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 914 NTAGIEPEDVAKRLMDY-GFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 914 ~~~g~~~~~vakrL~d~-Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
+ .+++++|.++ |+.+. | +. ||+++- .++++++.++++|++.+.
T Consensus 359 -----~-~~~~~~L~~~~~v~v~----p--~~-Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 359 -----T-KEQVERLIEKYHIYLL----D--NG-RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred -----C-HHHHHHHHHhCCEeec----C--CC-eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 2 4778888866 98753 1 22 888753 578999999999998764
No 462
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.47 E-value=6.7e-12 Score=143.61 Aligned_cols=277 Identities=14% Similarity=0.131 Sum_probs=171.1
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g 713 (1050)
..+|++.+++.+|.+...+..+.|++.- ..++++.. . +++ |++++..+......+++.|++++.||+++.
T Consensus 42 ~~~lr~~ia~~~~~~~~~I~it~Gs~~~--l~~~~~~~--~----~~~-vv~~~P~y~~y~~~~~~~G~~v~~vp~~~~- 111 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKIKVLIGPGLTHF--IYRLLSYI--N----VGN-IIIVEPNFNEYKGYAFTHGIRISALPFNLI- 111 (332)
T ss_pred HHHHHHHHHHHhCCCcceEEECCCHHHH--HHHHHHHh--C----CCc-EEEeCCChHHHHHHHHHcCCeEEEEeCCcc-
Confidence 3478899999999998776666666532 22233321 1 233 666666554555568899999999998753
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccccc-ccCCC----CcccCc
Q 001579 714 NINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQV-GLTSP----GYIGAD 785 (1050)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~-gl~~p----g~~GaD 785 (1050)
..|.+.+++ .++++|++++| |.+|.+- +.+++|.++|+++|+++++|.++..-.. +.... ...+-=
T Consensus 112 ~~~~~~l~~------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~v 185 (332)
T PRK06425 112 NNNPEILNN------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNV 185 (332)
T ss_pred cCcHHHHhh------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCE
Confidence 346555431 36778999999 4789864 3588889999999999999998532111 10000 111112
Q ss_pred EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHCh
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1050)
Q Consensus 786 v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1050)
|++.++.|+|++| |.++|++++.+++.+.+... .....++. . +..++.....
T Consensus 186 i~~~SfSK~~~l~----GlRiGy~v~~~~li~~l~~~--------------~~~~~~~~-----~-----~~~~l~~~~~ 237 (332)
T PRK06425 186 IIGRSLTKILGIP----SLRIGYIATDDYNMKISRKI--------------TEPWSVCD-----P-----AIDFIRSIDL 237 (332)
T ss_pred EEEeecHHhcCCc----hhhheeeecCHHHHHHHHHc--------------CCCCccCH-----H-----HHHHHHHhhh
Confidence 5566788888654 78899999987766544210 00011221 1 1112222222
Q ss_pred hhH-HHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCC-C
Q 001579 866 KGL-TEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWP-V 941 (1050)
Q Consensus 866 eGl-~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~-~~~p-v 941 (1050)
+.+ ++..+...++.+++.+.|++. +.+. ..+.+.+ +.+.++ +..+++++|.++||.+.. ..|+ .
T Consensus 238 ~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~-~~~~g~f---~~~~~~--------~~~~~~~~l~~~gi~v~~~~~f~~~ 305 (332)
T PRK06425 238 DYVAKHSLDIMENERSYLINNLEAMGFRAA-GDPSANF---ITFMIP--------DAHDFYSYLLKNGILVRLLDDYECL 305 (332)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEC-CCCCceE---EEEEcC--------CHHHHHHHHHHCCeEEEECCCCCCC
Confidence 222 344555556778888989875 3322 1122222 344432 467899999999998643 3452 2
Q ss_pred -CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 942 -PGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 942 -~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
.+.+||++. +.+++++|+++|++++
T Consensus 306 ~~~~iRis~~---~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 306 GEQYIRIAIR---RRSFNIKLVNALRNFL 331 (332)
T ss_pred CCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 468999985 6789999999998764
No 463
>PRK05839 hypothetical protein; Provisional
Probab=99.46 E-value=9.2e-12 Score=144.87 Aligned_cols=290 Identities=12% Similarity=0.023 Sum_probs=169.5
Q ss_pred ccHHHHHHHHHHHHHHhhCC--CeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEE
Q 001579 628 QGYQEMFNNLGEWLCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~--d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv 705 (1050)
+|..++.+.+.+++.+..|. +..++..++|++.. ...+++.+... .+++.|+++...+..+...+.+.|++++
T Consensus 60 ~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a--l~~~~~~~~~~---~~gd~vlv~~P~y~~~~~~~~~~g~~v~ 134 (374)
T PRK05839 60 AGEESLREAQRGFFKRRFKIELKENELIPTFGTREV--LFNFPQFVLFD---KQNPTIAYPNPFYQIYEGAAIASRAKVL 134 (374)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH--HHHHHHHHhcC---CCCCEEEECCCCchhhHHHHHhcCCEEE
Confidence 57777777888888888784 45566677776632 22222322111 1457899988766666666889999999
Q ss_pred EEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccccccccCCC-
Q 001579 706 SVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP- 779 (1050)
Q Consensus 706 ~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~gl~~p- 779 (1050)
.++.+++ ..+|+++. .+ +++++|++++| |.+|.+- +.+++|+++|+++|+++++|.++..-...-..|
T Consensus 135 ~v~~~~~~~~~~d~~~~--~~----~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s 208 (374)
T PRK05839 135 LMPLTKENDFTPSLNEK--EL----QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPS 208 (374)
T ss_pred EeecccccCCcCCcchh--hh----ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCC
Confidence 9999754 34555443 23 46889999999 5788774 368899999999999999999864211000011
Q ss_pred -Cc-------ccCc--EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhh
Q 001579 780 -GY-------IGAD--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1050)
Q Consensus 780 -g~-------~GaD--v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~ 849 (1050)
.. ...| +++.++.|+|+.| |.++|++.+++++...+-.. +.....+.+...+
T Consensus 209 ~~~~~~~~~~~~~~~vi~~~SfSK~~~~~----GlRiG~ii~~~~~~~~~~~~--------------~~~~~~~~~~~~q 270 (374)
T PRK05839 209 LLEASILVGNESFKNVLVINSISKRSSAP----GLRSGFIAGDASILKKYKAY--------------RTYLGCASPLPLQ 270 (374)
T ss_pred HhhhhcccCccccCcEEEEeccccccCCc----cceeEEEecCHHHHHHHHHH--------------HhhcCCCCChHHH
Confidence 00 0111 5567788887644 78999999887665433100 0000111111112
Q ss_pred HHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHH
Q 001579 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMD 929 (1050)
Q Consensus 850 ~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d 929 (1050)
.. +.+ .+ ..++-+++..+....+.+++.+.| .+.. +.+..+ +.++++ +..+++++|.+
T Consensus 271 ~~---~~~-~l--~~~~~~~~~~~~~~~~~~~~~~~l----~~~~--p~gg~f--i~~~~~--------~~~~~~~~l~~ 328 (374)
T PRK05839 271 KA---AAV-AW--LDDEHAEFFRNIYAKNLKLAREIL----GITI--PPATFY--VWLPVD--------NDEEFTKKLYQ 328 (374)
T ss_pred HH---HHH-Hh--ccchHHHHHHHHHHHHHHHHHHhc----CCCC--CCeeEE--EEEeCC--------ChHHHHHHHHH
Confidence 11 111 11 122333444444444445554444 2111 112121 345543 34688899874
Q ss_pred -CCcccCCC-CCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 930 -YGFHGPTM-SWP----VPGTLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 930 -~Gi~~~~~-~~p----v~~~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
+|+.+... .|. ..+.+||+++. +.+++.+.++.|.++++
T Consensus 329 ~~gi~v~pg~~f~~~~~~~~~iRis~~~--~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 329 NEGIKVLPGSFLGRNGIGKGYVRIALVY--DTPKLEKALEIIKTYLE 373 (374)
T ss_pred HCCEEEeCchhhCCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHhh
Confidence 99986432 232 24799999964 57888888888877653
No 464
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.46 E-value=2.4e-11 Score=142.57 Aligned_cols=276 Identities=18% Similarity=0.186 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhh-hh--c-C---CCCEEE-EcCCCChhHHHHHHHh-------
Q 001579 211 ESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNN-IQ--K-G---KKKTFI-IASNCHPQTIDICITR------- 275 (1050)
Q Consensus 211 e~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~-~~--~-~---~gd~Vl-vs~~~Hps~~~~~~~~------- 275 (1050)
+...++++.+++++|.+ .+.++++||.|.|+++.+.+ +. + + .+++|+ .+...|.++...+..-
T Consensus 83 ~~~~~l~~~l~~~~~~~--~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 83 DQLAPLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred HHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 35567888999999875 58888999999998885433 21 0 1 235555 4556788776554210
Q ss_pred -ccCCCeEEEEc---Cchhhhc-cCCCeeEEEEEcC-CCCeeEcc----HHHHHHHHHhCCcEEEEEecCcc-ccCCCC-
Q 001579 276 -ADGFDIKVVVS---DLKDIDY-KSGDVCGVLVQYP-GTEGEVLD----YGDFIKNAHANGVKVVMATDLLA-LTILKP- 343 (1050)
Q Consensus 276 -a~~~gi~v~~~---~~~~l~~-l~~~t~~V~v~~p-n~~G~i~d----i~~I~~~ah~~galliV~a~~~a-lg~l~~- 343 (1050)
..+....+..+ |++++++ +.+++++|++..| |.+|.+.| +++|.++|+++|++++++ +..+ +|....
T Consensus 161 ~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~D-Ev~~g~g~~g~~ 239 (401)
T PRK00854 161 GFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILD-EIQTGLGRTGKL 239 (401)
T ss_pred cCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe-chhhCCCCCchH
Confidence 01112233333 4567776 7788999999887 77899886 999999999999999994 3333 332110
Q ss_pred ----CCcccceEEEecCccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCC
Q 001579 344 ----PGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSN 419 (1050)
Q Consensus 344 ----pg~~GaDivvgs~k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsn 419 (1050)
......|+++. +|+|++ |.-..|++.+++++.+.+... .. + +.
T Consensus 240 ~~~~~~g~~~D~~~~-~K~l~g----g~~~ig~v~~~~~~~~~l~~~----------~~-----------------~-~t 286 (401)
T PRK00854 240 LAEEHEGIEADVTLI-GKALSG----GFYPVSAVLSNSEVLGVLKPG----------QH-----------------G-ST 286 (401)
T ss_pred hHHhhcCCCCCEEEe-cccccC----CccCeEEEEEcHHHHhcccCC----------CC-----------------C-CC
Confidence 01124688876 488852 221256777888776654210 00 0 01
Q ss_pred ccchh-HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEc----CCCCccEEEEecCC--HHHHHHHH
Q 001579 420 ICTAQ-ALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ----GLPFFDTVKVKCAD--AHAIASAA 492 (1050)
Q Consensus 420 ict~~-~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~----~~~~~~~v~i~~~~--~~~i~~~L 492 (1050)
+|.+. ...+..+++ ..+..++ +.++..++.+++.+.|++++ .... +...+-.+.+..+. ..++.+.|
T Consensus 287 ~~~~~~~~aa~~a~L--~~l~~~~---~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L 360 (401)
T PRK00854 287 FGGNPLACAVARAAL--KVLTEEG---MIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEAGGARQYCEAL 360 (401)
T ss_pred CCcCHHHHHHHHHHH--HHHHHcC---HHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCchhHHHHHHHH
Confidence 12111 122222222 3332222 45677788899999998875 3322 11111123232222 67899999
Q ss_pred HHcCceeeeecCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 493 YKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 493 ~~~GI~~~~~~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
.++||.+.....+.||++++..+|++|||++++.|.
T Consensus 361 ~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~l~ 396 (401)
T PRK00854 361 KERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIA 396 (401)
T ss_pred HHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 999999876556799999999999999999999985
No 465
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.46 E-value=8.7e-12 Score=142.58 Aligned_cols=272 Identities=17% Similarity=0.148 Sum_probs=167.7
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~ 714 (1050)
.++++.+++.+|.+. +..++|++. +..++++. . ++++|++++..+..+...+++.|++++.|+.+
T Consensus 52 ~~Lr~~ia~~~~~~~--I~it~Gs~~--al~~~~~~---~----~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~---- 116 (330)
T PRK05664 52 DGLEAAARAYYGAPQ--LLPVAGSQA--AIQALPRL---R----APGRVGVLSPCYAEHAHAWRRAGHQVRELDEA---- 116 (330)
T ss_pred HHHHHHHHHHhCCCC--EEECcCHHH--HHHHHHHc---c----CCCEEEEcCCChHHHHHHHHHcCCeEEEechh----
Confidence 467889999999874 344455542 22122221 2 45789999886655566688999999998763
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc-cCc--EEE
Q 001579 715 INIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-GAD--VCH 788 (1050)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~-GaD--v~~ 788 (1050)
+++++++ +++++++++|| .+|.+- +++++|+++|+++|+++++|.++.... .......+ ..| +++
T Consensus 117 ----~~~~~~~----~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~-~~~s~~~~~~~~~vi~~ 187 (330)
T PRK05664 117 ----EVEAALD----SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT-PQHSLAACAHRPGLIVL 187 (330)
T ss_pred ----hHhhhhc----CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC-CcccccccccCCCEEEE
Confidence 4555553 56678889994 788775 358888888899999999999863211 10111111 122 556
Q ss_pred eCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhH
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGL 868 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl 868 (1050)
.++.|+|++| |.++|++++.+++...+-.. +...++++ ..+. ++.+++. ..+-.
T Consensus 188 ~SfSK~~gl~----GlRiG~~v~~~~l~~~~~~~--------------~~~~~~~~--~~~~----~~~~~L~--~~~~~ 241 (330)
T PRK05664 188 RSFGKFFGLA----GARLGFVLAEPALLRALAEL--------------LGPWTVSG--PTRW----LAQAALA--DTPWQ 241 (330)
T ss_pred eeccccccCC----CcceEEEEeCHHHHHHHHHh--------------cCCCCCCH--HHHH----HHHHHHh--ChHHH
Confidence 7788888654 78999999987766544210 00011221 1111 1222222 11223
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEE
Q 001579 869 TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIE 948 (1050)
Q Consensus 869 ~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~ 948 (1050)
++..+....+.+++.+.|++. .+...+ + ...-+.+... +..++.+.|.++||.+.. |..++.+||+
T Consensus 242 ~~~~~~~~~~r~~l~~~L~~~-~~~~~~--~-~~~f~~~~~~--------~~~~~~~~l~~~gi~v~~--f~~~~~iRis 307 (330)
T PRK05664 242 RRQRERLLAASQRLAALLRRH-GLTPAG--G-CALFQWVRTE--------DAAALHEFLARRGILTRL--FEQPASLRFG 307 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCcccC--C-cceEEEEecC--------CHHHHHHHHHHCCeEEEE--CCCCCeEEEE
Confidence 444455556788899989875 221111 1 1111223321 467899999999999863 3335799999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Q 001579 949 PTESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 949 ~te~~t~eeid~fv~aL~~i~~ei 972 (1050)
+.. +.+++++|+++|+++.+|.
T Consensus 308 ~~~--~~~~~~~l~~al~~~~~~~ 329 (330)
T PRK05664 308 LPA--DEADWARLDQALLAYRKEA 329 (330)
T ss_pred CCC--CHHHHHHHHHHHHHHHhhc
Confidence 864 5789999999999887763
No 466
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.46 E-value=2.8e-11 Score=141.07 Aligned_cols=304 Identities=11% Similarity=0.104 Sum_probs=182.9
Q ss_pred cCCCCCCCCCcHHHHHHHHh--CCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHh
Q 001579 171 IGMGYYNTHVPPVILRNIME--NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCN 248 (1050)
Q Consensus 171 lG~g~~~~~~p~~i~~~i~~--~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~ 248 (1050)
+|.|-.+...|+.+.+.+.+ +..+++.|.+.+ | ..++++.+|+++|.++.++.+++|+|.+...++.++
T Consensus 33 l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~-----g----~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~ 103 (380)
T PRK06225 33 MGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPE-----G----FPELRELILKDLGLDDDEALITAGATESLYLVMRAF 103 (380)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCc-----c----hHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHh
Confidence 35565555556665444432 122344443322 2 456788999999999999999999997766555443
Q ss_pred hhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc-----------hhhhc-cCCCeeEEEEEcC-CCCeeEc--
Q 001579 249 NIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL-----------KDIDY-KSGDVCGVLVQYP-GTEGEVL-- 313 (1050)
Q Consensus 249 ~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~-----------~~l~~-l~~~t~~V~v~~p-n~~G~i~-- 313 (1050)
. ++|++|++++..|+.....+ +..|.+++.++. +++++ ++++++++++.+| |.+|.+.
T Consensus 104 -~--~~gd~vl~~~p~y~~~~~~~----~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 176 (380)
T PRK06225 104 -L--SPGDNAVTPDPGYLIIDNFA----SRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE 176 (380)
T ss_pred -c--CCCCEEEEcCCCCcchHHHH----HHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence 1 37899999998887655443 335667766543 33444 5678999988888 6799864
Q ss_pred -cHHHHHHHHHhCCcEEEEEecCc---cccCCCCCC--cccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCc
Q 001579 314 -DYGDFIKNAHANGVKVVMATDLL---ALTILKPPG--ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGR 386 (1050)
Q Consensus 314 -di~~I~~~ah~~galliV~a~~~---alg~l~~pg--~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgr 386 (1050)
++++|+++|+++|++++++. .. ..+.. ... .-...++++|. |.||.| |-..|++++++++.+.+...
T Consensus 177 ~~~~~i~~~a~~~~~~ii~De-~y~~~~~~~~-~~~~~~~~~~i~~~s~SK~~g~~----G~RiG~i~~~~~l~~~~~~~ 250 (380)
T PRK06225 177 EEIKEFAEIARDNDAFLLHDC-TYRDFAREHT-LAAEYAPEHTVTSYSFSKIFGMA----GLRIGAVVATPDLIEVVKSI 250 (380)
T ss_pred HHHHHHHHHHHHCCcEEEEeh-hHHHHhccCC-chhhcCCCCEEEEeechhhcCCc----cceeEEEecCHHHHHHHHHH
Confidence 69999999999999999943 11 01100 001 11345777775 877532 33469999988877654210
Q ss_pred EEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCC
Q 001579 387 IVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGT 466 (1050)
Q Consensus 387 ivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~ 466 (1050)
. +...+++... ..++...+.. ..+=++++.+...++.+++.+.|+++.+
T Consensus 251 ~-----------------------------~~~~~~~~~~-~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 299 (380)
T PRK06225 251 V-----------------------------INDLGTNVIA-QEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEG 299 (380)
T ss_pred H-----------------------------hcccCCCHHH-HHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 0 0111222211 1111111111 1122345555566677788888887522
Q ss_pred EEEc-CCCCccEEEEecC----CHHHHHHHHHHcCceeeee-------cCCeEEEEeccCCCHHHHHHHHHHHhC
Q 001579 467 VEVQ-GLPFFDTVKVKCA----DAHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 467 ~~l~-~~~~~~~v~i~~~----~~~~i~~~L~~~GI~~~~~-------~~~~lris~~e~~t~edId~lv~~l~~ 529 (1050)
+.+. .++...-+.+.++ +..++.+.|.++||.++.. .++.+|+|+.. +++|++++++.|..
T Consensus 300 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~--~~e~l~~~~~~l~~ 372 (380)
T PRK06225 300 VFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI--PREQVEVFCEEFPD 372 (380)
T ss_pred CccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC--CHHHHHHHHHHHHH
Confidence 4321 1111112333432 2778999999999987542 23589999863 78999999999963
No 467
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.46 E-value=4.2e-12 Score=143.76 Aligned_cols=161 Identities=22% Similarity=0.199 Sum_probs=129.8
Q ss_pred HHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhhc
Q 001579 214 LNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDY 293 (1050)
Q Consensus 214 ~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~ 293 (1050)
.++++.++.|.|.+. +.++.+|.+|+.+++..+. ..+++|+....++..+...++.....+|++...+|+++++.
T Consensus 80 ~~le~~iaal~ga~~--~l~fsSGmaA~~~al~~L~---~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~ 154 (409)
T KOG0053|consen 80 DVLESGIAALEGAAH--ALLFSSGMAAITVALLHLL---PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKK 154 (409)
T ss_pred HHHHHHHHHHhCCce--EEEecccHHHHHHHHHHhc---CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHH
Confidence 346689999999876 7788999987777766553 27899999999999999999877789999999999876654
Q ss_pred ----cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEEEecCccccCCCCCCcccceEEEecC-ccccccCCCCC
Q 001579 294 ----KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVMATDLLALTILKPPGELGADIVVGSA-QRFGVPMGYGG 367 (1050)
Q Consensus 294 ----l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV~a~~~alg~l~~pg~~GaDivvgs~-k~~g~P~~~GG 367 (1050)
+.++|++|++..| |.+..+.||++|+++||++|++++|+ +.++-++...|-.+|||||+.|+ |.|++.-.
T Consensus 155 ~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVD-nTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsd--- 230 (409)
T KOG0053|consen 155 ILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVD-NTFGSPYNQDPLPLGADIVVHSATKYIGGHSD--- 230 (409)
T ss_pred HHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEe-CCcCcccccChhhcCCCEEEEeeeeeecCCcc---
Confidence 6778999999998 89999999999999999999999994 56666677889999999999998 88865322
Q ss_pred cceEEEEEe-hhhhhcC
Q 001579 368 PHAAFLATS-QEYKRMM 383 (1050)
Q Consensus 368 P~~G~la~~-~~~~r~l 383 (1050)
=-+|.++.+ +++.+++
T Consensus 231 vi~G~iv~n~~~~~~~l 247 (409)
T KOG0053|consen 231 VIGGSVVLNSEELASRL 247 (409)
T ss_pred eeeeEEecCcHHHHHHH
Confidence 123556654 4554443
No 468
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.46 E-value=1.8e-11 Score=143.39 Aligned_cols=297 Identities=15% Similarity=0.190 Sum_probs=177.5
Q ss_pred ccHHHHHHHHHHHHHHhhCC--Ceeee-ccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGF--DSFSL-QPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~--d~~~l-~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|+.++...+.+++....+. +...+ ..++++++... +++.+. .+++.|++++..+..+...++..|+++
T Consensus 73 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~---~~~~l~-----~~gd~Vli~~p~~~~~~~~~~~~g~~v 144 (394)
T PRK06836 73 AGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNV---ALKAIL-----NPGDEVIVFAPYFVEYRFYVDNHGGKL 144 (394)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHH---HHHHhc-----CCCCEEEEcCCCCccHHHHHHHcCCEE
Confidence 46555555555555544333 33333 33444444432 233321 245789999887766666678899999
Q ss_pred EEEcCCCC-CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHH------cCCEEEEecccccc-c
Q 001579 705 VSVGTDAK-GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHD------NGGQVYMDGANMNA-Q 773 (1050)
Q Consensus 705 v~V~~d~~-g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~------~G~~v~vD~A~~~a-l 773 (1050)
+.++++++ +.+|+++|+++++ +++++|++++| |.+|.+. +.+++|+++|++ ||+++++|.++..- .
T Consensus 145 ~~v~~~~~~~~~d~~~l~~~~~---~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~ 221 (394)
T PRK06836 145 VVVPTDTDTFQPDLDALEAAIT---PKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVY 221 (394)
T ss_pred EEEecCCccCcCCHHHHHhhcC---cCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccc
Confidence 99999876 6899999999996 68999999998 4689874 258889999999 89999999986321 1
Q ss_pred cccCCC---CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCC---CCCCccccCCCCCCCCCCCCCCCCCcchh
Q 001579 774 VGLTSP---GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPF---LPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1050)
Q Consensus 774 ~gl~~p---g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~---lpg~~vg~~~~~~~~~~~~~t~~i~sa~~ 847 (1050)
.+-..+ ..+.-.+++.+++|+|+.| |-++|++++++.+... +...... . ...+..+.+..
T Consensus 222 ~~~~~~~~~~~~~~~i~~~S~SK~~~~p----GlRiG~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~ 287 (394)
T PRK06836 222 DGAEVPYIFKYYDNSIVVYSFSKSLSLP----GERIGYIAVNPEMEDADDLVAALVFA---------N-RILGFVNAPAL 287 (394)
T ss_pred CCCCCCChHHccCcEEEEecchhhccCc----ceeeEEEecCHHHhhhHHHHHHHHHH---------h-hccccccCCHH
Confidence 110111 1223357778889988644 5679999987654321 1000000 0 00011111111
Q ss_pred hhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHH
Q 001579 848 GSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKR 926 (1050)
Q Consensus 848 g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakr 926 (1050)
.+.. ....+. ++.. .+...++.+++.+.|+++ +.+. .+.+.+ + +.+.++ ..+..++++.
T Consensus 288 ~q~~-------~~~~l~-~~~~--~~~~~~~r~~l~~~L~~~g~~~~--~~~gg~-~-~~~~~~------~~~~~~~~~~ 347 (394)
T PRK06836 288 MQRV-------VAKCLD-ATVD--VSIYKRNRDLLYDGLTELGFECV--KPQGAF-Y-LFPKSP------EEDDVAFCEK 347 (394)
T ss_pred HHHH-------HHHHhC-ChHH--HHHHHHHHHHHHHHHHhCCCEee--cCCceE-E-EEEeCC------CCCHHHHHHH
Confidence 1211 112222 1221 223345567777888765 3322 122212 1 233443 1367788899
Q ss_pred HHHCCcccCC-CCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 927 LMDYGFHGPT-MSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 927 L~d~Gi~~~~-~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
|.++|+.+.. -.|..++.+||++. .++++++..++.|++++++
T Consensus 348 l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 348 AKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred HHhCCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Confidence 9999997643 33444689999997 4688888888888877654
No 469
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.46 E-value=2.9e-11 Score=145.32 Aligned_cols=313 Identities=15% Similarity=0.129 Sum_probs=180.2
Q ss_pred ccHHHHHHHHHHHHHHhhCCC--eeeeccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d--~~~l~~~sGa~-ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++.+..|.+ ...+..++|++ +.. ++++.+.. .++|.|+++...+..+...++..|.++
T Consensus 115 ~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~---~~~~~l~~----~~gD~Vlv~~P~y~~y~~~~~~~g~~~ 187 (481)
T PTZ00377 115 AGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIK---LLLQLLIG----DPSDGVMIPIPQYPLYSAAITLLGGKQ 187 (481)
T ss_pred cCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHH---HHHHHhcc----CCCCEEEECCCCchhHHHHHHHcCCEE
Confidence 576666666677776655644 33455555554 332 33333211 146889999987766777788999999
Q ss_pred EEEcCCCC--CCCCHHHHHHHHHcC---CCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccc-cc-c
Q 001579 705 VSVGTDAK--GNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQ-V 774 (1050)
Q Consensus 705 v~V~~d~~--g~iD~e~L~~~i~~~---~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al-~ 774 (1050)
+.++++++ ..+|+++|++++++. ..++++|++++| |.+|.+. +.+++|+++|+++|+++++|.++.. .+ .
T Consensus 188 v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~ 267 (481)
T PTZ00377 188 VPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDG 267 (481)
T ss_pred EEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCC
Confidence 99998754 479999999998731 127899999999 5799875 3599999999999999999998632 11 1
Q ss_pred c--cCCC----CcccC------c-EEEeCCcccc-ccCCCCCCCcceeeee---cccccCCCCCCccccCCCCCCCCCCC
Q 001579 775 G--LTSP----GYIGA------D-VCHLNLHKTF-CIPHGGGGPGMGPIGV---KKHLAPFLPSHPVVSTGGIPAPEKSQ 837 (1050)
Q Consensus 775 g--l~~p----g~~Ga------D-v~~~~~hKtf-~~P~g~GGPg~G~i~v---~~~l~~~lpg~~vg~~~~~~~~~~~~ 837 (1050)
+ +... ..+.. . ++..++.|+| ++| |.++|++++ .+++++.+-.. +
T Consensus 268 ~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~----GlRiG~~~~~~~p~~li~~l~~~--------------~ 329 (481)
T PTZ00377 268 EKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGEC----GRRGGYFELTNIPPEVREQIYKL--------------A 329 (481)
T ss_pred CCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCC----cCceEEEEEeCCCHHHHHHHHHH--------------h
Confidence 1 1110 01111 1 4456788974 444 899999986 55555433100 0
Q ss_pred CCCCCCcchhhhHHHHHHHHHHHHH--HChhh---H----HHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEe
Q 001579 838 PLGTIAAAPWGSALILPISYTYIAM--MGSKG---L----TEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVD 908 (1050)
Q Consensus 838 ~t~~i~sa~~g~~~~~~~a~a~l~~--lG~eG---l----~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~ 908 (1050)
. ...+++..+|.. +.+++.. .+... + ++..+...++.+++.+.|+++..+.+..++|.++ +.++
T Consensus 330 ~-~~~~~~~~~Q~a----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~f--l~~~ 402 (481)
T PTZ00377 330 S-INLCSNVVGQLM----TGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMY--AFPR 402 (481)
T ss_pred h-eecCCChHHHHH----HHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEE--EEee
Confidence 0 011222222322 1222210 01111 1 1121223456778888887752232222333222 2233
Q ss_pred cc--c-ccc---cCCC-CHHHHH-HHHHHCCccc-CCCCCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 909 LR--G-LKN---TAGI-EPEDVA-KRLMDYGFHG-PTMSWP---VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 909 ~~--~-~~~---~~g~-~~~~va-krL~d~Gi~~-~~~~~p---v~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
++ + ... ..++ +..+++ +.|.++|+.+ +...|. ..+.+|+++. .+.+++++.++.|.+++++..+
T Consensus 403 ~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~~ 478 (481)
T PTZ00377 403 IELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMVKKIKEFHESFMK 478 (481)
T ss_pred ccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 32 0 000 0011 123344 4456789975 433443 2358999997 5678999999999988776543
No 470
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.46 E-value=6.2e-12 Score=145.45 Aligned_cols=215 Identities=20% Similarity=0.189 Sum_probs=141.2
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHh----CCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAM----CGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~----~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|.++..+++ ..+ . ++|+||++...+|..+..... .++++.
T Consensus 56 ~~~le~~lA~leg~~~~-v~~~sG~aAi~~~l---~~l--~----~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~---- 121 (364)
T PRK07269 56 RAKLEETLAAIESADYA-LATSSGMSAIVLAF---SVF--P----VGSKVVAVRDLYGGSFRWFNQQEKEGRFHFT---- 121 (364)
T ss_pred HHHHHHHHHHHhCCCeE-EEeCCHHHHHHHHH---HHh--C----CCCEEEEecCCcCchHHHHHHHHhcCcEEEE----
Confidence 45789999999998765 55677776653332 221 2 457899887777655543221 122222
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
...|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.+... ..+..|-..|+|+++
T Consensus 122 ---~~~d~~~l~~~i~---~~TklV~lesP~NPtg~~~-di~~I~~la~~~gi~vvvD~t~~~--~~~~~pl~~gaDivv 192 (364)
T PRK07269 122 ---YANTEEELIAAIE---EDTDIVYIETPTNPLMVEF-DIEKVAKLAHAKGAKVIVDNTFYS--PIYQRPIELGADIVL 192 (364)
T ss_pred ---ecCCHHHHHHhcC---cCceEEEEECCCCCCCeee-CHHHHHHHHHHcCCEEEEECCCcc--cccCCchhhCCcEEE
Confidence 1258999999997 789999999995 688877 899999999999999999987432 223567778999999
Q ss_pred eCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.+++|+++.+ |.--.|.|++++ ++...+.. . + ...+. +.+++ -+++...|-+-
T Consensus 193 ~S~tK~l~g~---~d~~gG~v~~~~~~l~~~~~~-~-----------~-~~~G~-~~s~~---------~a~l~~~~L~t 246 (364)
T PRK07269 193 HSATKYLSGH---NDVLAGVVVTNDLELYEKLFY-N-----------L-NTTGA-VLSPF---------DSYLLMRGLKT 246 (364)
T ss_pred ecCceeccCC---CcccceEEEeCcHHHHHHHHH-H-----------H-HHhCC-CCCHH---------HHHHHHcCCCc
Confidence 9999999522 111146777753 34332210 0 0 00111 11111 13344555566
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCeeecCC
Q 001579 868 LTEASKIAILNANYMAKRLEKH---YPILFRGV 897 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~---~~v~~~g~ 897 (1050)
|....++..+|+.++++.|+++ ..+.|+|.
T Consensus 247 L~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~ 279 (364)
T PRK07269 247 LSLRMERSTANAQEVVAFLKKSPAVKEVLYTGK 279 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCc
Confidence 7777788889999999999875 34566653
No 471
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.46 E-value=1.9e-11 Score=146.83 Aligned_cols=308 Identities=15% Similarity=0.212 Sum_probs=182.0
Q ss_pred cccHHHHHHHHHHHHHHhhC----CCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHH-hCC
Q 001579 627 AQGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MCG 701 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G----~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~-~~G 701 (1050)
.+|..++.+.+.+++.+..| ++...+..++|+++- .-++++.+. .++|.|+++...++.+...+. ..|
T Consensus 93 ~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~a--l~~l~~~l~-----~pGD~Vlv~~P~Y~~~~~~~~~~~G 165 (496)
T PLN02376 93 YHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGA--NETIMFCLA-----DPGDVFLIPSPYYAAFDRDLRWRTG 165 (496)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHH--HHHHHHHhC-----CCCCEEEECCCCccchHHHHHhhCC
Confidence 36877777777777777766 454455555665432 222233321 256889999988777766565 589
Q ss_pred CEEEEEcCCC--CCCCCHHHHHHHHHc---CCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-
Q 001579 702 MKIVSVGTDA--KGNINIEELRKAAEA---NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA- 772 (1050)
Q Consensus 702 ~~vv~V~~d~--~g~iD~e~L~~~i~~---~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a- 772 (1050)
++++.|+++. ++.+|++++++++++ ...++++|++++| |.+|.+- +.+++|+++|+++|+.+++|.++...
T Consensus 166 ~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~ 245 (496)
T PLN02376 166 VEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATV 245 (496)
T ss_pred CEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccc
Confidence 9999999963 467999999876532 2357899999999 5789875 35888999999999999999986421
Q ss_pred ccc--cCCC----Ccc-----cCcE--EEeCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCC
Q 001579 773 QVG--LTSP----GYI-----GADV--CHLNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQP 838 (1050)
Q Consensus 773 l~g--l~~p----g~~-----GaDv--~~~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~ 838 (1050)
+.+ +.+. .+. ..|. ++.+++|+|+.| |.++|+++.. +.+...+.. ...
T Consensus 246 f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glp----GlRvG~li~~~~~l~~~~~~--------------~~~ 307 (496)
T PLN02376 246 FAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLP----GFRVGIVYSFNDSVVSCARK--------------MSS 307 (496)
T ss_pred cCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCC----cceEEEEEECCHHHHHHHHH--------------Hhh
Confidence 111 1110 010 1233 356889998755 7899999984 333322100 000
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHHChhh-----HHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccc
Q 001579 839 LGTIAAAPWGSALILPISYTYIAMMGSKG-----LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGL 912 (1050)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~eG-----l~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~ 912 (1050)
...+++ ..+. +...++.... +.+..+......+++.+.|++. +++. .+++..+ +.++++..
T Consensus 308 ~~~vs~--~~Q~-------a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~--~~~aG~f--lwi~l~~~ 374 (496)
T PLN02376 308 FGLVSS--QTQL-------MLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACL--TSNAGLF--AWMDLRHL 374 (496)
T ss_pred cCCCCH--HHHH-------HHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccc--CCCceEE--EEEEchhh
Confidence 111221 1121 1122222222 2223344445566777888764 3322 1222222 56777532
Q ss_pred ccc-CC-CCHHHHHHHHHH-CCcccC-CCCC--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 913 KNT-AG-IEPEDVAKRLMD-YGFHGP-TMSW--PVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 913 ~~~-~g-~~~~~vakrL~d-~Gi~~~-~~~~--pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
... .. .+..++.+.|.+ .|+.+. ...| ..++.+||++.. .++++++..++.|++++.+.+
T Consensus 375 ~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 375 LRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred hccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHHhh
Confidence 110 00 123578888876 598863 3344 235899999974 345778777777777766433
No 472
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.45 E-value=4.4e-12 Score=147.51 Aligned_cols=209 Identities=23% Similarity=0.214 Sum_probs=140.0
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC-ccHHH---HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNPAT---AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHg-t~pa~---a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.. +..++|+.+..+ ++ .. . .++++||++...|+ ++... +...|++++.++.
T Consensus 52 ~~~Le~~lA~l~g~~~~-~~~~sG~aai~~-~~---~~-l----~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 52 RAALEELIAVLEGGHAG-FAFGSGMAAITA-VM---ML-F----SSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred HHHHHHHHHHHhCCCce-EEeCCHHHHHHH-HH---HH-h----CCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 56899999999998865 456677654422 21 11 1 24578999887776 33322 3457999998875
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++++++++ ++|++|++++| |.+|.+. |+++|+++||++|+++++|+++.. ..+..|..+|+|+++
T Consensus 122 -----~d~~~l~~ai~---~~tklV~le~P~NPtg~~~-dl~~I~~la~~~g~~lvvD~a~~~--~~~~~p~~~g~Divv 190 (377)
T PRK07671 122 -----SNLEEVEEAIR---PNTKAIYVETPTNPLLKIT-DIKKISTIAKEKGLLTIVDNTFMT--PYWQSPISLGADIVL 190 (377)
T ss_pred -----CCHHHHHHhcC---CCCeEEEEECCCCCCCccc-CHHHHHHHHHHcCCEEEEECCCCc--cccCChhhhCCeEEE
Confidence 48999999997 78999999999 4689887 899999999999999999988532 223466778999999
Q ss_pred eCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.+++|+|+.|-+ --.|.+++++ ++...+.. . + ...+...+ + ..+| +...|-+-
T Consensus 191 ~S~sK~l~G~~~---~~~G~~v~~~~~l~~~~~~--~----------~-~~~g~~~~-~-------~~a~--l~~~~l~t 244 (377)
T PRK07671 191 HSATKYLGGHSD---VVAGLVVVNSPELAEDLHF--V----------Q-NSTGGILG-P-------QDSW--LLLRGLKT 244 (377)
T ss_pred ecCcccccCCcc---ceeEEEEeCcHHHHHHHHH--H----------H-HhhcCCCC-H-------HHHH--HHHcCcCh
Confidence 999999852211 1246666653 34332210 0 0 01111111 1 1133 33444455
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001579 868 LTEASKIAILNANYMAKRLEKH 889 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~ 889 (1050)
+....++...|+..+++.|++.
T Consensus 245 l~~R~~~~~~na~~la~~L~~~ 266 (377)
T PRK07671 245 LGIRMEEHETNSRAIAEFLNNH 266 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 6666677789999999999876
No 473
>PRK07505 hypothetical protein; Provisional
Probab=99.45 E-value=3.1e-11 Score=141.74 Aligned_cols=316 Identities=16% Similarity=0.175 Sum_probs=176.8
Q ss_pred CCccccccCCCCCC-CCCcHHHHHHHHhCCC-cc-cccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHH
Q 001579 164 NKVYKSFIGMGYYN-THVPPVILRNIMENPA-WY-TQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAA 240 (1050)
Q Consensus 164 n~~~~~~lG~g~~~-~~~p~~i~~~i~~~~~-~~-t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa 240 (1050)
++.|.+|.+.++.+ |.-|.++. .+.+.-. |. + +++.+.. ....+.+.++++.+++++|. .+.++.+|+.+
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~~-A~~~~l~~~g~~--~~~~~~~-~~~~~~~~~l~~~la~~~~~---~~~~~~sG~~a 117 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAIIE-GAVDALKRTGSL--HLSSSRT-RVRSQILKDLEEALSELFGA---SVLTFTSCSAA 117 (402)
T ss_pred CceEEEeecCCccCCCCCHHHHH-HHHHHHHHhCCC--CCCccch-hhhhHHHHHHHHHHHHHhCC---CEEEECChHHH
Confidence 34466676666666 55565553 3432111 11 1 1111111 12356778899999999997 35566677767
Q ss_pred HHHHH-HHhh-h-hcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcC---chhhhc-cCCCeeEEEEEcC-CCCeeE
Q 001579 241 AEAMA-MCNN-I-QKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSD---LKDIDY-KSGDVCGVLVQYP-GTEGEV 312 (1050)
Q Consensus 241 ~eA~~-la~~-~-~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~---~~~l~~-l~~~t~~V~v~~p-n~~G~i 312 (1050)
.++++ ++.. . ..++++.|+.+...|+++...... .+ .+.+++.++ ++++++ +.++++++++.+| |.+|.+
T Consensus 118 ~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~-~~-~~~~v~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~ 195 (402)
T PRK07505 118 HLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGI-CA-DETEVETIDHNDLDALEDICKTNKTVAYVADGVYSMGGI 195 (402)
T ss_pred HHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhh-hh-cCCeEEEeCCCCHHHHHHHHhcCCCEEEEEecccccCCc
Confidence 77555 3322 1 112334556667999986432211 11 244666664 455655 5666778888887 678999
Q ss_pred ccHHHHHHHHHhCCcEEEEEecCccccCCCCC------Ccccc---e--EEEecC-ccccccCCCCCcceEEEEE-ehhh
Q 001579 313 LDYGDFIKNAHANGVKVVMATDLLALTILKPP------GELGA---D--IVVGSA-QRFGVPMGYGGPHAAFLAT-SQEY 379 (1050)
Q Consensus 313 ~di~~I~~~ah~~galliV~a~~~alg~l~~p------g~~Ga---D--ivvgs~-k~~g~P~~~GGP~~G~la~-~~~~ 379 (1050)
.|+++|.++|+++|++++++ +.++++.+.+. ..+|. | ++++|. |.|+++ | |++.+ ++++
T Consensus 196 ~~~~~i~~l~~~~~~~li~D-Ea~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~----G---g~~~~~~~~~ 267 (402)
T PRK07505 196 APVKELLRLQEKYGLFLYID-DAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS----G---GVIMLGDAEQ 267 (402)
T ss_pred CCHHHHHHHHHHcCCEEEEE-CcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc----C---eEEEeCCHHH
Confidence 99999999999999999994 44443322111 12332 3 555565 877532 1 56654 4555
Q ss_pred hhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHH
Q 001579 380 KRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFAL 459 (1050)
Q Consensus 380 ~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~ 459 (1050)
.+.+... ...+.. . .|+++ .+..+..+++ ..+..+.+.++.+++.++...+.+
T Consensus 268 ~~~~~~~----------~~~~t~------------~--~~~~~-~a~aa~~a~l--~~~~~~~~~~~~~~l~~~~~~~~~ 320 (402)
T PRK07505 268 IELILRY----------AGPLAF------------S--QSLNV-AALGAILASA--EIHLSEELDQLQQKLQNNIALFDS 320 (402)
T ss_pred HHHHHHh----------CCCcee------------C--CCCCH-HHHHHHHHHH--HHHhccCcHHHHHHHHHHHHHHHH
Confidence 5443100 000100 0 11111 1222222222 344556666666666555555443
Q ss_pred HHhcCCCEEEcCCCCccEEEEecCC---HHHHHHHHHHcCceeeeec-------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 460 GLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 460 ~L~~~G~~~l~~~~~~~~v~i~~~~---~~~i~~~L~~~GI~~~~~~-------~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
.+... ....++....+.++. +.++.++|.++||.++... .+.||+++...+|++|+|+++++|.
T Consensus 321 ~~~~~-----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~ 394 (402)
T PRK07505 321 LIPTE-----QSGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLK 394 (402)
T ss_pred HHHhc-----CCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHH
Confidence 33211 011222222222222 6789999999999987541 2589999999999999999999986
No 474
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.45 E-value=2e-11 Score=144.04 Aligned_cols=143 Identities=17% Similarity=0.149 Sum_probs=107.3
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCC-ccHHHHH---hCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHG-TNPATAA---MCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHg-t~pa~a~---~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|.++..+++.++. . ++++||++...++ +...... ..|+++..++.
T Consensus 60 ~~~Le~~lA~l~g~~~~-l~~ssG~~Ai~~al~al~----~----~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~ 130 (425)
T PRK06084 60 NDVLEQRVAALEGGVGA-LAVASGMAAITYAIQTIA----E----AGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH 130 (425)
T ss_pred HHHHHHHHHHHhCCCce-eEehhHHHHHHHHHHHHh----C----CCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence 34789999999997654 456778766644444332 2 3567888766555 3332222 25777777764
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++|+++++ +++++|++++| |.+|.+. |+++|+++||++|+++++|.++... .+..|.++|+|+++
T Consensus 131 -----~d~e~le~ai~---~~tklV~lesp~NPtG~v~-dl~~I~~la~~~~i~vVvD~a~a~~--~~~~p~~~gaDivv 199 (425)
T PRK06084 131 -----DDIAALEALID---ERTKAVFCESIGNPAGNII-DIQALADAAHRHGVPLIVDNTVATP--VLCRPFEHGADIVV 199 (425)
T ss_pred -----CCHHHHHHHhc---cCCcEEEEeCCCCCCCeec-CHHHHHHHHHHcCCEEEEECCCccc--ccCChhhcCCCEEE
Confidence 48999999997 68999999998 6789887 7999999999999999999986532 23567778999999
Q ss_pred eCCccccc
Q 001579 789 LNLHKTFC 796 (1050)
Q Consensus 789 ~~~hKtf~ 796 (1050)
.+++|+|+
T Consensus 200 ~S~tK~l~ 207 (425)
T PRK06084 200 HSLTKYIG 207 (425)
T ss_pred ECchhccc
Confidence 99999996
No 475
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.45 E-value=2.8e-11 Score=127.42 Aligned_cols=297 Identities=18% Similarity=0.228 Sum_probs=185.9
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCC--C
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTD--A 711 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d--~ 711 (1050)
+..+.+.|++.+|||.+.+. ++.-.|-++.+.++. .++|-|++...+|-+..-+|+.+|++|..||-. +
T Consensus 63 I~~F~~dlaeFlg~D~~R~t-~GARe~KfavMhal~--------~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~P 133 (382)
T COG1103 63 IKDFLEDLAEFLGMDEVRVT-AGAREAKFAVMHALC--------KEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYP 133 (382)
T ss_pred HHHHHHHHHHHhCCceeeec-ccchhhHHHHHHHhc--------cCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCC
Confidence 55677789999999987543 222335555544432 256889999999988888899999999999954 2
Q ss_pred CCCCCHHHHHHHHHcC----CCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcE
Q 001579 712 KGNINIEELRKAAEAN----RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADV 786 (1050)
Q Consensus 712 ~g~iD~e~L~~~i~~~----~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv 786 (1050)
+..+++|...+.|++. ++.+++.++|+|. .+|.+. |.+.++++|+++|+++++.+|+..+-.. .+-.+.|+|+
T Consensus 134 ey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~-Dakkva~ic~e~gvPlllN~AYt~Grmp-vs~ke~g~DF 211 (382)
T COG1103 134 EYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLA-DAKKVAKICREYGVPLLLNCAYTVGRMP-VSGKEIGADF 211 (382)
T ss_pred ceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCch-hhHHHHHHHHHcCCceEeecceeecccc-ccccccCCCE
Confidence 4688999988888663 2457888999995 689987 8999999999999999999986533322 1234679999
Q ss_pred EEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCC-CCCCCCcchhhhHHHHH-HHHHHHHHHC
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQ-PLGTIAAAPWGSALILP-ISYTYIAMMG 864 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~-~t~~i~sa~~g~~~~~~-~a~a~l~~lG 864 (1050)
+++|.||+++. .|| +|++++++++.+..--+. |... ..++- ..+ |++ .|.+.+.. ++.-+..
T Consensus 212 iVgSGHKsmAA----s~P-iGvl~~~eE~ae~V~r~S-g~~~----~~KEvellG--CT~-rGapivTlmASfP~V~--- 275 (382)
T COG1103 212 IVGSGHKSMAA----SAP-IGVLAMSEEWAEIVLRRS-GRAF----PKKEVELLG--CTV-RGAPIVTLMASFPHVV--- 275 (382)
T ss_pred EEecCccchhc----cCC-eeEEeehhHHHHHHHhhc-cccc----ccceeeeec--ccc-cCchHHHHHhcCHHHH---
Confidence 99999999864 233 788999987765432111 0000 00010 111 322 23332211 1122211
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEE-EecccccccCCCCHHHHH-----------HHHHHCCc
Q 001579 865 SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFI-VDLRGLKNTAGIEPEDVA-----------KRLMDYGF 932 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i-~~~~~~~~~~g~~~~~va-----------krL~d~Gi 932 (1050)
+- .+.-..-+++++|+.++|+++-.+..-|. .|.-|..+ |..+ ...+|+ +.|.++||
T Consensus 276 -eR-VkrWdeEv~kaR~fv~elEkigg~~qlG~-rPk~HdLm~Fetp--------~f~eIakk~~r~gyFlY~ELK~RgI 344 (382)
T COG1103 276 -ER-VKRWDEEVEKARWFVAELEKIGGVKQLGE-RPKNHDLMKFETP--------VFHEIAKKHKRKGYFLYEELKKRGI 344 (382)
T ss_pred -HH-HHHHHHHHHHHHHHHHHHHHhhhHHHhCC-CCcccceeeecCc--------hHHHHHHhCcCCceeeHHHHHhcCc
Confidence 10 11224456789999999998732221132 23444433 2222 123444 44555666
Q ss_pred ccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 933 HGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 933 ~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
+.- .......+.++ +...+.|+++..++++++|+++
T Consensus 345 ~GI--~~G~Tk~~K~s-vyGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 345 HGI--QPGQTKYFKLS-VYGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred ccc--ccCceeEEEEE-eecCCHHHHHHHHHHHHHHHHh
Confidence 531 10012334444 3457899999999999999876
No 476
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.44 E-value=1.1e-11 Score=145.55 Aligned_cols=144 Identities=13% Similarity=0.073 Sum_probs=112.7
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|...+ +..+||..|..++++++. .++|+||++...++..... ....|++++++..
T Consensus 63 v~~lE~~la~leg~~~a-v~~~SG~aAi~~al~all--------~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 63 LAAFEQKLAELEGGVGA-VATASGQAAIMLAVLNIC--------SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHhCCCcE-EEECCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 45789999999998765 457788877755554431 2568899987655432232 4568999999854
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.+|+++++++|+ ++|++|+++.| |..+.+. ||++|+++||++|+++++|.+. +...+.+|-+.|+||++
T Consensus 134 ----~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~-Di~~I~~iA~~~gi~livD~T~--~tP~~~~pl~~GADIvv 203 (432)
T PRK06702 134 ----NLTADEIVALAN---DKTKLVYAESLGNPAMNVL-NFKEFSDAAKELEVPFIVDNTL--ATPYLCQAFEHGANIIV 203 (432)
T ss_pred ----CCCHHHHHHhCC---cCCeEEEEEcCCCcccccc-CHHHHHHHHHHcCCEEEEECCC--CchhhCChhhcCCCEEE
Confidence 479999999997 89999999998 4677776 7999999999999999999763 33345678899999999
Q ss_pred eCCccccc
Q 001579 789 LNLHKTFC 796 (1050)
Q Consensus 789 ~~~hKtf~ 796 (1050)
.++.|+++
T Consensus 204 ~S~TKy~~ 211 (432)
T PRK06702 204 HSTTKYID 211 (432)
T ss_pred EccccccC
Confidence 99999986
No 477
>PRK09105 putative aminotransferase; Provisional
Probab=99.44 E-value=3e-11 Score=140.39 Aligned_cols=266 Identities=14% Similarity=0.101 Sum_probs=172.7
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch---
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK--- 289 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~--- 289 (1050)
..++++.+++.+|.++.++.++.|++.++..++.++ . ++||+|++++-.|+.+...++ ..|++++.++.+
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l-~--~~gd~Vli~~P~y~~~~~~~~----~~g~~~~~v~~~~~~ 152 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAF-T--SPTAGLVTADPTYEAGWRAAD----AQGAPVAKVPLRADG 152 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHH-c--CCCCEEEEeCCChHHHHHHHH----HcCCeEEEecCCCCC
Confidence 445778899999999999999999997766655544 2 278999999999998877654 458888877542
Q ss_pred -----hhhccCCCeeEEEEEcC-CCCeeEccHHHHHHHHHh--CCcEEEEEecCccccCCCCCC---cccceEEEe-cC-
Q 001579 290 -----DIDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTILKPPG---ELGADIVVG-SA- 356 (1050)
Q Consensus 290 -----~l~~l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~--~galliV~a~~~alg~l~~pg---~~GaDivvg-s~- 356 (1050)
++++..+++++|++.+| |.+|.+.+.++|.++++. +|++++++.-...++...+.. +.+-++++. |.
T Consensus 153 ~~d~~~l~~~~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfS 232 (370)
T PRK09105 153 AHDVKAMLAADPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFS 232 (370)
T ss_pred CCCHHHHHhcCCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEeccc
Confidence 23222356888999998 789999988888777654 488888843111221111111 224465554 54
Q ss_pred ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHH
Q 001579 357 QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAV 436 (1050)
Q Consensus 357 k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~ 436 (1050)
|.||.| | =-.||+++++++++.+-. ....+.+ ... ..+++ ..
T Consensus 233 K~~g~~-G---lRiG~~v~~~~~i~~l~~-----------------------------~~~~~~~-~~~---~~aa~-~~ 274 (370)
T PRK09105 233 KLYGMA-G---MRLGLAAARPDLLAKLAR-----------------------------FGHNPLP-VPA---AAAGL-AS 274 (370)
T ss_pred HhhcCC-c---cceeeeecCHHHHHHHHh-----------------------------cCCCCcC-HHH---HHHHH-HH
Confidence 777543 1 127899888777665410 0111111 111 12222 12
Q ss_pred HhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC-HHHHHHHHHHcCceeeee---cCCeEEEEec
Q 001579 437 YHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVV---DSNTVTASFD 512 (1050)
Q Consensus 437 ~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~-~~~i~~~L~~~GI~~~~~---~~~~lris~~ 512 (1050)
+..++-+++..++..++.+++.+.|++.| +++..+ ...-+.++++. ..++.+.|.++||.++.. .++.+|+++.
T Consensus 275 L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~-~~~f~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~ 352 (370)
T PRK09105 275 LRDPKLVPQRRAENAAVREDTIAWLKKKG-YKCTPS-QANCFMVDVKRPAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG 352 (370)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcCCC-CCcEEEEeCCCCHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC
Confidence 22233456667778888889999999887 776532 11223355544 788999999999988432 2578999977
Q ss_pred cCCCHHHHHHHHHHHh
Q 001579 513 ETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 513 e~~t~edId~lv~~l~ 528 (1050)
+.+++++|+++|.
T Consensus 353 ---~~~~~~~l~~al~ 365 (370)
T PRK09105 353 ---SEEEMAAFRSAFA 365 (370)
T ss_pred ---CHHHHHHHHHHHH
Confidence 6889999999985
No 478
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.44 E-value=1.8e-11 Score=141.51 Aligned_cols=278 Identities=15% Similarity=0.167 Sum_probs=166.7
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCC--
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAK-- 712 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~-- 712 (1050)
.++++.+++.++.+..++..+.|++. +..++++.+. .++++|++++..++.+...+.+.|.+++.++++.+
T Consensus 68 ~~lr~~ia~~~~~~~~~I~it~G~~~--al~~~~~~~~-----~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~ 140 (357)
T PRK14809 68 ADLTAALADRWDVSPEQVWLANGGDG--ALDYLARAML-----DPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADD 140 (357)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHH--HHHHHHHHhc-----CCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcC
Confidence 46778888888888766666666652 2223344431 24578999987654445557788999999988643
Q ss_pred CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHc--CCEEEEeccccccccccCCCC-cc-cC-c-
Q 001579 713 GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDN--GGQVYMDGANMNAQVGLTSPG-YI-GA-D- 785 (1050)
Q Consensus 713 g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~--G~~v~vD~A~~~al~gl~~pg-~~-Ga-D- 785 (1050)
..+|++++.+.. +++++|++++| |.+|.+- +.+++.++++.. +.++++|.++.. +..-..+. .. .. .
T Consensus 141 ~~~~~~~~~~~~----~~~k~i~l~~p~NPTG~~~-s~~~~~~l~~~~~~~~~iI~De~y~~-~~~~~~~~~~~~~~~~v 214 (357)
T PRK14809 141 FEQTADTVLDAY----DGERIVYLTSPHNPTGSEI-PLDEVEALAERTDEETLVVVDEAYGE-FAERPSAVALVEERDDV 214 (357)
T ss_pred CCcCHHHHHHhh----cCCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCccCcEEEEechhhh-ccCCchhHHHHhhCCCE
Confidence 467888877765 35788999999 5789886 455555554433 789999998632 11100110 01 11 2
Q ss_pred EEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHCh
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGS 865 (1050)
Q Consensus 786 v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~ 865 (1050)
+++.++.|+|++| |.++|++++++++...+-.. .. ..+.+...+ .++ +..+..
T Consensus 215 i~~~SfSK~~~~~----GlRiG~~~~~~~~~~~~~~~--------------~~--~~~~~~~~~----~~a---~~~l~~ 267 (357)
T PRK14809 215 AVLRTFSKAYGLA----GLRLGYAVVPEEWADAYARV--------------NT--PFAASELAC----RAG---LAALDD 267 (357)
T ss_pred EEEecchhHhcCc----chhheeeecCHHHHHHHHHh--------------CC--CCCCCHHHH----HHH---HHHhCC
Confidence 4556788988654 78899999987765543210 00 111111111 111 222222
Q ss_pred hh-HHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCC-CCCCCCC
Q 001579 866 KG-LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPT-MSWPVPG 943 (1050)
Q Consensus 866 eG-l~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~-~~~pv~~ 943 (1050)
++ +++..+....+.+++.+.|+.. .++ +.+.+ +.+++. +..++.+.|.++|+.+.. ..|..++
T Consensus 268 ~~~~~~~~~~~~~~r~~l~~~L~~~---~~~-~~g~f---~~~~~~--------~~~~~~~~l~~~gv~v~~g~~f~~~~ 332 (357)
T PRK14809 268 DEHVERTVETARWAREYIREELDAP---TWE-SAGNF---VLAEVG--------DASAVAEAAQERGVIVRDCTSFGLPE 332 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCc---cCC-CCCCE---EEEECC--------CHHHHHHHHHHCCEEEEECccCCCCC
Confidence 33 3344444445556676766542 121 12322 344442 457899999999998643 3344457
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHH
Q 001579 944 TLMIEPTESESKEELDRYCDALISIRE 970 (1050)
Q Consensus 944 ~lrI~~te~~t~eeid~fv~aL~~i~~ 970 (1050)
.+||++. +.+++++++++|+++++
T Consensus 333 ~iRls~~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 333 CIRITCG---TREETERAVEVLNEVLA 356 (357)
T ss_pred eEEEecC---CHHHHHHHHHHHHHHhc
Confidence 8999974 47899999999987653
No 479
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.44 E-value=1.4e-11 Score=142.24 Aligned_cols=280 Identities=19% Similarity=0.280 Sum_probs=178.0
Q ss_pred cccccCCChhHHhhhHHHHHHHHHHHHHHhcC------CCCc-ceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCCh
Q 001579 194 WYTQYTPYQAEIAQGRLESLLNFQTMIADLTG------LPMS-NASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHP 266 (1050)
Q Consensus 194 ~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G------~~~a-nasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hp 266 (1050)
-...|.|++. ..++++.+|++++ .+.. ++.+..|+.++...+....+. +++++|++++-.|+
T Consensus 36 ~~~~Y~~~~g---------~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~--~~~~~vlv~~P~y~ 104 (363)
T PF00155_consen 36 SFLGYPPPQG---------YPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKI--NPGDTVLVPDPCYP 104 (363)
T ss_dssp GCTSSTCTTH---------HHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHS--STTSEEEEEESSST
T ss_pred ccccCCCchh---------hHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccc--cccccceecCCccc
Confidence 3456776652 2346678888888 6666 676666666665554444322 27899999999999
Q ss_pred hHHHHHHHhccCCCeEEEEcC----------chhhhc-cCC------CeeEEEEEcC-CCCeeEcc---HHHHHHHHHhC
Q 001579 267 QTIDICITRADGFDIKVVVSD----------LKDIDY-KSG------DVCGVLVQYP-GTEGEVLD---YGDFIKNAHAN 325 (1050)
Q Consensus 267 s~~~~~~~~a~~~gi~v~~~~----------~~~l~~-l~~------~t~~V~v~~p-n~~G~i~d---i~~I~~~ah~~ 325 (1050)
.+...++. .|++++.++ +++|++ +++ ++++|++.+| |.+|.+.+ +++|+++|+++
T Consensus 105 ~~~~~~~~----~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~ 180 (363)
T PF00155_consen 105 SYIEAARL----LGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREY 180 (363)
T ss_dssp HHHHHHHH----TTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHT
T ss_pred cccccccc----cCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhccc
Confidence 99998764 355555554 455555 433 5688888998 67998764 56666669999
Q ss_pred CcEEEEEecCccccCCCCCC--------cccce-EEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCC
Q 001579 326 GVKVVMATDLLALTILKPPG--------ELGAD-IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSS 395 (1050)
Q Consensus 326 galliV~a~~~alg~l~~pg--------~~GaD-ivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~ 395 (1050)
|++++++ +..+......++ +.+.+ |++.|. |.||.| |--.|++.+.+++.+.+.
T Consensus 181 ~~~ii~D-e~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~----GlRvG~i~~~~~~~~~l~----------- 244 (363)
T PF00155_consen 181 NIIIIVD-EAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLP----GLRVGYIVAPPELIERLR----------- 244 (363)
T ss_dssp TSEEEEE-ETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSG----GGTEEEEEEEHHHHHHHH-----------
T ss_pred ccceeee-eceeccccCCCccCcccccccccccceeeeecccccccc----ccccccccchhhhhhhhh-----------
Confidence 9999994 333332222111 11233 777776 888654 123689998887776551
Q ss_pred CCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHH-hCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC--
Q 001579 396 GKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVY-HGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-- 472 (1050)
Q Consensus 396 g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~-~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-- 472 (1050)
+-. ++..++ ......+++++... ...+=++++.++..++..++.+.|++.| +.+..+
T Consensus 245 -----------------~~~-~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~-~~~~~~~~ 304 (363)
T PF00155_consen 245 -----------------RFQ-RSGLSS-SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEIG-ITVLPPEA 304 (363)
T ss_dssp -----------------HHH-HHTTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-SEEEHHSB
T ss_pred -----------------hcc-cccccc-chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhh-hheeeccC
Confidence 000 011111 22222222221111 0111457788888999999999999887 887642
Q ss_pred CCccEEEEecCC--HHHHHHHHHHc-Cceeeee----cCCeEEEEeccCCCHHHHHHHHHHH
Q 001579 473 PFFDTVKVKCAD--AHAIASAAYKI-EMNLRVV----DSNTVTASFDETTTLEDVDKLFIVF 527 (1050)
Q Consensus 473 ~~~~~v~i~~~~--~~~i~~~L~~~-GI~~~~~----~~~~lris~~e~~t~edId~lv~~l 527 (1050)
.++ +.+..+. ..++.+.|.++ ||.+... .++.+|+++ ...++++++++++.|
T Consensus 305 ~~~--~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 305 GFF--LWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp SSE--EEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred ccE--EEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 232 2222332 57899999987 9988652 267899999 889999999999875
No 480
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.43 E-value=5.3e-11 Score=138.56 Aligned_cols=277 Identities=15% Similarity=0.155 Sum_probs=174.6
Q ss_pred hHHHHHHHHHHHHHHhcC--CCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEE
Q 001579 208 GRLESLLNFQTMIADLTG--LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVV 285 (1050)
Q Consensus 208 G~le~l~e~q~~ia~L~G--~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~ 285 (1050)
|..+....+.+.+.+.+| .++.++.++.|++.+...++.++ .++||+|++++..|+.+...++ ..|++++.
T Consensus 62 G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l---~~~gd~vl~~~p~y~~~~~~~~----~~g~~~~~ 134 (382)
T PRK06108 62 GIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQAL---VGPGDEVVAVTPLWPNLVAAPK----ILGARVVC 134 (382)
T ss_pred CCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHh---cCCCCEEEEeCCCccchHHHHH----HCCCEEEE
Confidence 333333334445555567 56678888899987766555443 1378999999999998877654 45777777
Q ss_pred cCc-----------hhhhc-cCCCeeEEEEEcC-CCCeeEc---cHHHHHHHHHhCCcEEEEEecCccccCCC----CC-
Q 001579 286 SDL-----------KDIDY-KSGDVCGVLVQYP-GTEGEVL---DYGDFIKNAHANGVKVVMATDLLALTILK----PP- 344 (1050)
Q Consensus 286 ~~~-----------~~l~~-l~~~t~~V~v~~p-n~~G~i~---di~~I~~~ah~~galliV~a~~~alg~l~----~p- 344 (1050)
++. +++++ ++++++++++++| |.+|.+. ++++|+++|+++|++++++ +..+..... .+
T Consensus 135 v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~D-e~y~~~~~~~~~~~~~ 213 (382)
T PRK06108 135 VPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVAD-EVYERLYYAPGGRAPS 213 (382)
T ss_pred eeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEe-hhhhhhccCCCCCCCC
Confidence 654 23444 5667899999888 7899775 5788999999999999994 222111111 01
Q ss_pred -----CcccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCC
Q 001579 345 -----GELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 418 (1050)
Q Consensus 345 -----g~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTs 418 (1050)
....-.++++|. |.||.| |-..|++++++++++.+... ... +
T Consensus 214 ~~~~~~~~~~~i~~~S~SK~~g~~----G~RiG~~~~~~~~~~~~~~~--------------------------~~~--~ 261 (382)
T PRK06108 214 FLDIAEPDDRIIFVNSFSKNWAMT----GWRLGWLVAPPALGQVLEKL--------------------------IEY--N 261 (382)
T ss_pred HhhcCCCcCCEEEEeechhhccCc----ccceeeeeCCHHHHHHHHHH--------------------------HHh--c
Confidence 011235778886 877643 33479999988777654100 000 0
Q ss_pred CccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEEEecCC---HHHHHHHHH-H
Q 001579 419 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAY-K 494 (1050)
Q Consensus 419 nict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~i~~~~---~~~i~~~L~-~ 494 (1050)
..|.+.. +..++..+.-.+.+-++++.+++.++.+++.+.|+++.++++..+....-+.++++. ..++.+.|. +
T Consensus 262 ~~~~~~~--~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~ 339 (382)
T PRK06108 262 TSCVAQF--VQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVAKPDGAMYAFFRIPGVTDSLALAKRLVDE 339 (382)
T ss_pred ccCCChH--HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCCCCCHHHHHHHHHHh
Confidence 1111111 112222112233444678888899999999999988733776532111113345443 678888875 5
Q ss_pred cCceeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 495 IEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 495 ~GI~~~~~------~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+||.+... .++.+|+|++. +.++|+..++.|.
T Consensus 340 ~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~ 377 (382)
T PRK06108 340 AGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLR 377 (382)
T ss_pred CCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHH
Confidence 79987542 24789999997 8899999888875
No 481
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.43 E-value=5.5e-11 Score=139.10 Aligned_cols=306 Identities=11% Similarity=0.112 Sum_probs=187.5
Q ss_pred ccCCCCCCCCCcHHHHHHHHh---CCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCC---CcceeEecchHHHHHH
Q 001579 170 FIGMGYYNTHVPPVILRNIME---NPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP---MSNASLLDEGTAAAEA 243 (1050)
Q Consensus 170 ~lG~g~~~~~~p~~i~~~i~~---~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~---~anasl~d~~Taa~eA 243 (1050)
.+|.|..+...|+.+.+.+.+ ++. ...|.+ .+|..+....+++.+++.+|.+ ..++.+++|++.++..
T Consensus 31 ~l~~g~~~~~~~~~~~~a~~~~~~~~~-~~~Y~~-----~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 31 SLGQGVVSYPPPPEAIEALNNFLANPE-NHKYQA-----VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred EccCCCCCCCCCHHHHHHHHHHHhCCC-CCCCCC-----CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 467777665566666544432 222 112332 3666677777888999999974 4578888898877665
Q ss_pred HHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc--------hhhhc-cCCCeeEEEEEcC-CCCeeEc
Q 001579 244 MAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYP-GTEGEVL 313 (1050)
Q Consensus 244 ~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--------~~l~~-l~~~t~~V~v~~p-n~~G~i~ 313 (1050)
++.++ . .+||+|++++-.|+.....++ ..|++++.++. +++++ +++++++|++.+| |.+|.+.
T Consensus 105 ~~~~~-~--~~gd~Vlv~~P~y~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~ 177 (389)
T PRK05957 105 AILAI-T--DPGDEIILNTPYYFNHEMAIT----MAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVY 177 (389)
T ss_pred HHHHh-c--CCCCEEEEeCCCCcCHHHHHH----hcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCc
Confidence 55544 2 378999999988877665543 45888877654 34555 6778999999888 7799987
Q ss_pred c---HHHHHHHHHhCCcEEEEEecCcc---ccC-C-CC----CCcccceEEEecC-ccccccCCCCCcc--eEEEEEehh
Q 001579 314 D---YGDFIKNAHANGVKVVMATDLLA---LTI-L-KP----PGELGADIVVGSA-QRFGVPMGYGGPH--AAFLATSQE 378 (1050)
Q Consensus 314 d---i~~I~~~ah~~galliV~a~~~a---lg~-l-~~----pg~~GaDivvgs~-k~~g~P~~~GGP~--~G~la~~~~ 378 (1050)
+ +++|+++||++|++++++. ..+ ..- . .+ +...+--|+++|. |.||. || .|++++.++
T Consensus 178 ~~~~~~~i~~~a~~~~~~li~De-~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~------~GlRiG~~~~~~~ 250 (389)
T PRK05957 178 PEALLRAVNQICAEHGIYHISDE-AYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGF------ASWRIGYMVIPIH 250 (389)
T ss_pred CHHHHHHHHHHHHHcCcEEEEec-cchhccCCCCCccChhhCCCccCcEEEEecchhhccC------ccceeEEEecCHH
Confidence 6 8999999999999999943 211 110 0 01 1112234667776 87643 45 789998887
Q ss_pred hhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHH
Q 001579 379 YKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFA 458 (1050)
Q Consensus 379 ~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~ 458 (1050)
+++++.. -+.+.+.|++... ..+++-+-..+..-+++..+++.++.+++.
T Consensus 251 ~~~~~~~----------------------------~~~~~~~~~~~~~--q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~ 300 (389)
T PRK05957 251 LLEAIKK----------------------------IQDTILICPPVVS--QYAALGALQVGKSYCQQHLPEIAQVRQILL 300 (389)
T ss_pred HHHHHHH----------------------------HHhhcccCCCcHH--HHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 7765521 0111122222111 111110011122225666777788888899
Q ss_pred HHHhcCCCE-EEcCC--CCccEEEEecC-C--HHHHHHHHH-HcCceeeee-----c-CCeEEEEeccCCCHHHHHHHHH
Q 001579 459 LGLKKLGTV-EVQGL--PFFDTVKVKCA-D--AHAIASAAY-KIEMNLRVV-----D-SNTVTASFDETTTLEDVDKLFI 525 (1050)
Q Consensus 459 ~~L~~~G~~-~l~~~--~~~~~v~i~~~-~--~~~i~~~L~-~~GI~~~~~-----~-~~~lris~~e~~t~edId~lv~ 525 (1050)
+.|++++++ .+..+ .++ +.++++ + ..++.++|. ++||.+... . ++.+|+++... +++++.+.++
T Consensus 301 ~~L~~~~~~~~~~~~~gg~~--~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~-~~~~l~~~~~ 377 (389)
T PRK05957 301 KSLGQLQDRCTLHPANGAFY--CFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGAL-QKATAKEGIE 377 (389)
T ss_pred HHHHhcCCCccccCCCeeEE--EEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecC-CHHHHHHHHH
Confidence 999887433 33221 112 223443 2 778988986 589987542 1 35799999654 4666666666
Q ss_pred HHh
Q 001579 526 VFA 528 (1050)
Q Consensus 526 ~l~ 528 (1050)
.|.
T Consensus 378 ~l~ 380 (389)
T PRK05957 378 RLV 380 (389)
T ss_pred HHH
Confidence 554
No 482
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.43 E-value=9.3e-12 Score=147.30 Aligned_cols=324 Identities=12% Similarity=0.110 Sum_probs=183.0
Q ss_pred ccccccccCcchhhhhccccccccccCCCCCchhhcccHHHHHHHHHHHHHHhhC-CCeeeeccCchHHHHHHHHHHHHH
Q 001579 592 IPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITG-FDSFSLQPNAGAAGEYAGLMVIRA 670 (1050)
Q Consensus 592 i~lGs~t~~~~~~~~~~~~~~~~f~~~~P~~p~e~~~G~~~~i~el~~~lael~G-~d~~~l~~~sGa~ge~a~Llair~ 670 (1050)
..+|++..++..++..+.-....| .+|. +...++.+.|++++. .+. .++.+||++++++++...|.
T Consensus 60 ~~lGh~~p~v~~Ai~~q~~~~~~~--~~~~----------~~~~~la~~l~~~~p~~~~-v~f~~sGseA~e~AlklAr~ 126 (431)
T PRK06209 60 VGLGHAYPPVVEAVREALQDGCNF--TRPS----------AIELDAAESFLELIDGADM-VKFCKNGSDATSAAVRLARA 126 (431)
T ss_pred hhcCCCCHHHHHHHHHHHHhCcCC--CCCC----------HHHHHHHHHHHHhCCccce-EEEecCHHHHHHHHHHHHHH
Confidence 468998888777766653221111 1121 123367888888874 343 46789999999999988887
Q ss_pred HHHhcCCCCCCEEEEc--CCCCCccHHHH----HhCCCE------EEEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEc
Q 001579 671 YHKARGDHHRNVCIIP--VSAHGTNPATA----AMCGMK------IVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTY 738 (1050)
Q Consensus 671 y~~~~G~~~r~~Vlip--~saHgt~pa~a----~~~G~~------vv~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~ 738 (1050)
|. +|.+|+.- .+.||.+..+. ...|.. +..++ ..|+++|+++++++.+++++|+++
T Consensus 127 ~t------gr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~aavi~E- 194 (431)
T PRK06209 127 YT------GRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDHPGRIACVILE- 194 (431)
T ss_pred Hh------CCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhCCCCEEEEEEc-
Confidence 72 24555542 34443221110 001110 11122 238999999998766678888775
Q ss_pred CCCccccc--cCHHHHHHHHHHcCCEEEEeccccccccccCCCC---cc--cCcEEEeCCccccccCCCCCCCcceeeee
Q 001579 739 PSTHGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG---YI--GADVCHLNLHKTFCIPHGGGGPGMGPIGV 811 (1050)
Q Consensus 739 Pn~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg---~~--GaDv~~~~~hKtf~~P~g~GGPg~G~i~v 811 (1050)
|- .|... +.+++|.++|++||+++++|.++ .++.. ..-| .+ -+|++++ .|.++ +|-| +|.+++
T Consensus 195 pv-~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~-~~~g~~~~~gv~PDi~t~--gK~lg----gG~p-~~av~~ 264 (431)
T PRK06209 195 PA-TADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRW-HMRGAQKLYGIVPDLSCF--GKALG----NGFA-VSALAG 264 (431)
T ss_pred cc-cCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCc-CcchhhHHhCCCcceeee--hhhhc----CCcc-cEEEEE
Confidence 32 23321 25999999999999999999975 22221 1001 12 3688665 58774 3334 667777
Q ss_pred cccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc--
Q 001579 812 KKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-- 889 (1050)
Q Consensus 812 ~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-- 889 (1050)
++++...+.-.... ..... ...+++.|++..++++.+.|..+..+++. ++...+.++|+++|++.
T Consensus 265 ~~~i~~~~~~~~~~---------~~~~~-~~~~T~~~np~~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~L~~~~~ 331 (431)
T PRK06209 265 KREYMELGGLEHTD---------RERVF-LLSTTHGAETHALAAAIATMAIYRDEDVI---ERLHEQGAKLAAGVNEAAA 331 (431)
T ss_pred HHHHHhhhcccccC---------CCCce-eeccCCCCCHHHHHHHHHHHHHHhccCHH---HHHHHHHHHHHHHHHHHHH
Confidence 87766541100000 00000 01122335566677788888888776643 34446677888888653
Q ss_pred -CCee--ecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 890 -YPIL--FRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 890 -~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
+.+. ..+.......+++.+ .+.+.....-...+.++|.++|+..+. +. ++..+|++|||+++++|.
T Consensus 332 ~~~~~~~vr~~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Gi~~p~--------l~--is~~ht~~dId~~l~~l~ 400 (431)
T PRK06209 332 EHGLQDHVRVSGRPCCLTYSTL-DGNGQPSQAFRTLFLQETIRRGVLMPS--------LV--VSYAHGDADIERTIDAVH 400 (431)
T ss_pred hCCCCeEEEeecceEEEEEecC-CcccCCcHHHHHHHHHHHHHCCccccc--------cc--ccccCCHHHHHHHHHHHH
Confidence 3321 122111111122211 110000000023677888999997641 23 345689999999999999
Q ss_pred HHHHHHHH
Q 001579 967 SIREEIAQ 974 (1050)
Q Consensus 967 ~i~~ei~~ 974 (1050)
+++.++.+
T Consensus 401 ~~l~~~~~ 408 (431)
T PRK06209 401 GALGVYRK 408 (431)
T ss_pred HHHHHHHH
Confidence 99988854
No 483
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.43 E-value=4.8e-11 Score=131.48 Aligned_cols=321 Identities=14% Similarity=0.106 Sum_probs=186.6
Q ss_pred CCCCCchhhcccHHHHHHHHHHHHHHhhCCC--ee-eeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccH
Q 001579 618 IHPFAPADQAQGYQEMFNNLGEWLCTITGFD--SF-SLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNP 694 (1050)
Q Consensus 618 ~~P~~p~e~~~G~~~~i~el~~~lael~G~d--~~-~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~p 694 (1050)
++-|+| ++|.+.+...+.+.+-+-+... .. .+...+-+||.+-++.++. . ++-.||+|..-...+.
T Consensus 96 ~N~Yap---s~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA----~----p~aNILlPrPGfp~Y~ 164 (447)
T KOG0259|consen 96 GNGYAP---SVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA----N----PGANILLPRPGFPLYD 164 (447)
T ss_pred CCCcCC---ccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc----C----CCCceecCCCCCchHH
Confidence 566666 6787665555444433322211 11 2333444777754444332 2 3446999987443333
Q ss_pred HHHHhCCCEEEEEcCCC--CCCCCHHHHHHHHHcCCCCEEEEEEEcCC-Ccccc-c-cCHHHHHHHHHHcCCEEEEeccc
Q 001579 695 ATAAMCGMKIVSVGTDA--KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVY-E-EGIDEICKIIHDNGGQVYMDGAN 769 (1050)
Q Consensus 695 a~a~~~G~~vv~V~~d~--~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~-~-~di~eI~~la~~~G~~v~vD~A~ 769 (1050)
.-|+..|++|+.+..-+ +-.+|++.++++++ +||+|++|.+|+ ..|.+ . ..+++|+++|+++|+.++.|..+
T Consensus 165 ~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D---ENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY 241 (447)
T KOG0259|consen 165 TRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD---ENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVY 241 (447)
T ss_pred HhhhhcCceeEeecccCcccceechHHHHHhhc---cCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhc
Confidence 34888999999998754 46899999999998 899999999995 56644 3 46999999999999999999875
Q ss_pred cc-cccc--cCCCCcccCcE---EEeCCccccccCCCCCCCcceeeeecccccCCCCCCc-cccCCCCCCCCCCCCCCCC
Q 001579 770 MN-AQVG--LTSPGYIGADV---CHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHP-VVSTGGIPAPEKSQPLGTI 842 (1050)
Q Consensus 770 ~~-al~g--l~~pg~~GaDv---~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~-vg~~~~~~~~~~~~~t~~i 842 (1050)
-. .+++ |.+-|.+..++ .+++..|.+-+| ||++|+|+..+.---+-.... .+. +....+
T Consensus 242 ~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VP----GWRlGWi~~hD~~gvf~~~~~~q~~----------~~~~~~ 307 (447)
T KOG0259|consen 242 GHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVP----GWRLGWIALHDPRGVFRDTKVVQGI----------KNFLDI 307 (447)
T ss_pred ceeecCCCCccchhhccccCceEeecccccccccC----CceeeeEEEecccccccchHHHHHH----------HHHHhc
Confidence 32 2221 23335665443 345678988888 899999998764321110000 000 000000
Q ss_pred CcchhhhHHHHHHHHHHHH-HHChhhHHHHHHHHHHHHHHHHHHHhccCCee-ecCCCCccceeEEEecccccccCCCCH
Q 001579 843 AAAPWGSALILPISYTYIA-MMGSKGLTEASKIAILNANYMAKRLEKHYPIL-FRGVNGTVAHEFIVDLRGLKNTAGIEP 920 (1050)
Q Consensus 843 ~sa~~g~~~~~~~a~a~l~-~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~-~~g~~g~~~~e~i~~~~~~~~~~g~~~ 920 (1050)
. .|...++..|.--+. .--++-+.+.......|++...++|+++..+. ...++|-.+--+-+++.-|.. -.+-
T Consensus 308 ~---~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~--~~dD 382 (447)
T KOG0259|consen 308 I---PGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPD--IEDD 382 (447)
T ss_pred c---CCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhcc--cccc
Confidence 0 011122222222222 22233344444445567888899999874332 112233221111123321110 1133
Q ss_pred HHHHHHHH-HCCcc-cCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 921 EDVAKRLM-DYGFH-GPTMSWPVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 921 ~~vakrL~-d~Gi~-~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
.+++.+|. |+.++ .|...|..++.+||+++- ..+.|+..++.|++..+.-.
T Consensus 383 ~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~--~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 383 VDFCQKLAREESVICLPGQAFGLKNWLRIVITV--EEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred HHHHHHHhhhcceEEeccccccCCCeEEEEEcc--ChHHHHHHHHHHHHHHHhhh
Confidence 57888886 56655 576666667999999874 34567777777777766544
No 484
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.43 E-value=1.3e-11 Score=143.64 Aligned_cols=217 Identities=19% Similarity=0.224 Sum_probs=141.1
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|.++...++.++ . .++++|+++...|+.+... ....|+++..++.
T Consensus 53 ~~~le~~lA~l~g~~~v-~~~~gg~~Ai~~~l~al---l-----~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~ 123 (382)
T TIGR02080 53 RDLLQQALAELEGGAGA-VVTNTGMSAIHLVTTAL---L-----GPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ 123 (382)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHHHHHHH---c-----CCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC
Confidence 45788999999997654 45567766664444332 1 2457899888766543322 2234567766642
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++++++++ ++|++|++++|+ .+|.+. |+++|+++||++|+++++|.++... ....|-.+|+|+++
T Consensus 124 -----~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~-dl~~I~~la~~~g~~vvvD~a~~~~--~~~~pl~~gaDivv 192 (382)
T TIGR02080 124 -----GDEQALRAALA---QKPKLVLIETPSNPLLRVV-DIAKICHLAKAVGAVVVVDNTFLSP--ALQNPLALGADLVL 192 (382)
T ss_pred -----CCHHHHHHhcC---cCceEEEEECCCCCCCEec-CHHHHHHHHHHcCCEEEEECCCccc--ccCCchhhCCCEEE
Confidence 48999999997 689999999995 789887 8999999999999999999986432 23356567999999
Q ss_pred eCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.+++|+++.+ ++-..|++.++ +++...+.. . + ..++ .+.++. .+| +..-|-+-
T Consensus 193 ~S~sK~l~G~---~~~~~G~i~~~~~~~~~~l~~----~--------~-~~~g-~~~sp~-------~a~--l~lr~l~t 246 (382)
T TIGR02080 193 HSCTKYLNGH---SDVIAGAVIAKDPQVAEELAW----W--------A-NNLG-VTGGAF-------DSY--LTLRGLRT 246 (382)
T ss_pred eecceeccCC---CCceeEEEEeCCHHHHHHHHH----H--------H-HccC-CCCCHH-------HHH--HHHcccch
Confidence 9999988511 22237877765 344332210 0 0 0011 111111 123 33344455
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC---CeeecC
Q 001579 868 LTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~~---~v~~~g 896 (1050)
|....++..+|+..+++.|+++. .|.|++
T Consensus 247 l~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~ 278 (382)
T TIGR02080 247 LVARMRLQQRNAQAIVEYLQTQPLVKKIYYPG 278 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCC
Confidence 65566777789999999998752 345654
No 485
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.42 E-value=1.5e-11 Score=142.49 Aligned_cols=284 Identities=15% Similarity=0.131 Sum_probs=169.8
Q ss_pred ccHHHHHHHHHHHHHHhhCCC---eeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEE
Q 001579 628 QGYQEMFNNLGEWLCTITGFD---SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKI 704 (1050)
Q Consensus 628 ~G~~~~i~el~~~lael~G~d---~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~v 704 (1050)
+|..++.+.+.+++.+..|.+ ...+..++|++..... +...... .+++.|+++...|..+...+.+.|+++
T Consensus 62 ~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~--~~~~l~~----~~gd~Vl~~~p~y~~~~~~~~~~g~~~ 135 (364)
T PRK07865 62 AGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAW--LPTLLGL----GPGDVVVIPELAYPTYEVGARLAGATV 135 (364)
T ss_pred cCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHH--HHHHHcC----CCCCEEEECCCCcccHHHHHHhcCCEE
Confidence 577777777778887766654 4456666666533222 2222211 245789999988877777788899998
Q ss_pred EEEcCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEeccccc-cccc-c---
Q 001579 705 VSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMN-AQVG-L--- 776 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~-al~g-l--- 776 (1050)
+.++ +++++. . +++++|++++| |.+|.+- +.+++|.++|+++|+++++|.++.. ...+ .
T Consensus 136 ~~~~-------~~~~l~---~---~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~ 202 (364)
T PRK07865 136 VRAD-------SLTELG---P---QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSI 202 (364)
T ss_pred EecC-------ChhhCC---c---ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCcc
Confidence 8774 223332 1 57889999999 5788764 3588999999999999999998642 1111 0
Q ss_pred CCC----CcccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHH
Q 001579 777 TSP----GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALI 852 (1050)
Q Consensus 777 ~~p----g~~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~ 852 (1050)
..+ ++..-.+++.+++|.|+.| |.++|++++++++...+-.. +.....+.+...+..
T Consensus 203 ~~~~~~~~~~~~~i~~~S~SK~~~~~----GlRiG~i~~~~~~~~~~~~~--------------~~~~~~~~~~~~q~~- 263 (364)
T PRK07865 203 LDPRVCGGDHTGLLAVHSLSKQSNLA----GYRAGFVAGDPALVAELLEV--------------RKHAGMMVPAPVQAA- 263 (364)
T ss_pred ccccccCCccceEEEEeechhccCCC----ceeeEEEecCHHHHHHHHHH--------------HHhcCCCcCHHHHHH-
Confidence 001 0111237788899998654 67899998887765543210 000011111122221
Q ss_pred HHHHHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCc
Q 001579 853 LPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGF 932 (1050)
Q Consensus 853 ~~~a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi 932 (1050)
+..++. ..+-+++..+....+.+++.+.|++. .+.+..+.+.++ +.+.+. .+..++++.|.++||
T Consensus 264 ---~~~~l~--~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~--~~~~~~-------~~~~~~~~~l~~~gv 328 (364)
T PRK07865 264 ---MVAALG--DDAHVREQRERYARRRAVLRPALEAA-GFRVDHSEAGLY--LWATRG-------EDCWDTVAWLAERGI 328 (364)
T ss_pred ---HHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCccEE--EEEeCC-------CCHHHHHHHHHHCCE
Confidence 112221 12334445555566778888888774 221112222221 334432 345788999999999
Q ss_pred ccCC-CCC-C-CCCEEEEEcCCCCCHHHHHHHHHHHH
Q 001579 933 HGPT-MSW-P-VPGTLMIEPTESESKEELDRYCDALI 966 (1050)
Q Consensus 933 ~~~~-~~~-p-v~~~lrI~~te~~t~eeid~fv~aL~ 966 (1050)
.+.. ..| + .++.+||+++. +++++++.++.|+
T Consensus 329 ~v~pg~~f~~~~~~~iRi~~~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 329 LVAPGDFYGPAGAQHVRVALTA--TDERIAAAVERLA 363 (364)
T ss_pred EEeCccccCcCCCCEEEEEecC--CHHHHHHHHHHhh
Confidence 8632 223 2 35789999874 5789999988774
No 486
>PRK07908 hypothetical protein; Provisional
Probab=99.42 E-value=4.5e-11 Score=137.68 Aligned_cols=297 Identities=15% Similarity=0.122 Sum_probs=182.9
Q ss_pred CCCCCCCCCcHHHHHHHHhCCCcccccCCChhHHhhhHHHHHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhh
Q 001579 172 GMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQ 251 (1050)
Q Consensus 172 G~g~~~~~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~ 251 (1050)
..|.-+...|+.+.+.+.+...-+..|.+. +| ..++++.+|+.+|.++.++.++.|++.++..+.. +.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-----~g----~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~---l~ 95 (349)
T PRK07908 28 AVNVRHDTPPEWLRERLAARLGDLAAYPST-----ED----ERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR---LR 95 (349)
T ss_pred cCCCCCCCCCHHHHHHHHHHhhHhhcCCCc-----cc----hHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh---cC
Confidence 344444456776655555432223445432 12 3457789999999999999999999976554333 32
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchh-----hhccCCCeeEEEEEcC-CCCeeEccHHHHHHHHHhC
Q 001579 252 KGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKD-----IDYKSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHAN 325 (1050)
Q Consensus 252 ~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~-----l~~l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~ 325 (1050)
+ +.+++. ||++...+.. ++..|++++.++.++ ++.+.++++++++.+| |.+|.+.+.++|.+++++
T Consensus 96 --~-~~viv~---~P~y~~~~~~-~~~~G~~i~~v~~~~~~~~d~~~l~~~~~~i~l~np~NPTG~~~~~~~l~~l~~~- 167 (349)
T PRK07908 96 --P-RRAAVV---HPSFTEPEAA-LRAAGIPVHRVVLDPPFRLDPAAVPDDADLVVIGNPTNPTSVLHPAEQLLALRRP- 167 (349)
T ss_pred --C-CeEEEe---CCCChHHHHH-HHHcCCEEEeeccCcccCcChhHhccCCCEEEEcCCCCCCCCCcCHHHHHHHHhc-
Confidence 4 456665 4554444432 345789998887642 1124567888999888 789999999999999975
Q ss_pred CcEEEEEecCcc---ccCCCCCC--cccceEEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcc
Q 001579 326 GVKVVMATDLLA---LTILKPPG--ELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPA 399 (1050)
Q Consensus 326 galliV~a~~~a---lg~l~~pg--~~GaDivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~ 399 (1050)
+.+++++ +..+ .+-..+.. +.+--++++|. |.|+.| |.-.||+++++++++.+....
T Consensus 168 ~~~iIvD-e~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~----GlRiG~~~~~~~~~~~~~~~~------------ 230 (349)
T PRK07908 168 GRILVVD-EAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLA----GLRVGYALGAPDVLARLTRGR------------ 230 (349)
T ss_pred CCEEEEE-CcchhhccCCccccccccCCCEEEEeecccccCCc----cceeeeeecCHHHHHHHHhcC------------
Confidence 7888883 3322 11111111 12223566675 877543 445799999888776551100
Q ss_pred eEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCCCCccEEE
Q 001579 400 LRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVK 479 (1050)
Q Consensus 400 ~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~~~~~~v~ 479 (1050)
...++++.+ ..+. ++ ++.-.+.+-++++.++..++.+++.+.|+++| +++..++...-+.
T Consensus 231 ----------------~~~~~~~~~-~~a~-~~-~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~p~~g~~~~ 290 (349)
T PRK07908 231 ----------------AHWPVGTLQ-LEAI-AA-CCAPRAVAEAAADAARLAADRAEMVAGLRAVG-ARVVDPAAAPFVL 290 (349)
T ss_pred ----------------CCCCccHHH-HHHH-HH-HhcccchHHHHHHHHHHHHHHHHHHHHHHhCC-cEeccCCCceEEE
Confidence 001222211 1111 11 11101122356777888888999999999886 8876432222244
Q ss_pred EecCCHHHHHHHHHHcCceeeee------cCCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 480 VKCADAHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 480 i~~~~~~~i~~~L~~~GI~~~~~------~~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+++++..++.+.|.++||.+... .++.+|+|+. +.+|+++|+++|+
T Consensus 291 ~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~---~~~~~~~l~~al~ 342 (349)
T PRK07908 291 VRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR---PRAEVPVLVQALA 342 (349)
T ss_pred EECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC---CCccHHHHHHHHH
Confidence 55555678888899999988642 2478999994 7889999999985
No 487
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.42 E-value=6.8e-11 Score=147.76 Aligned_cols=304 Identities=13% Similarity=0.097 Sum_probs=188.1
Q ss_pred HHHHHHHHHHhhC---CCeeeeccCchHHHHHHHHHHHH-HHHHhcCCC------------CCCEEE-EcCCCCCccHHH
Q 001579 634 FNNLGEWLCTITG---FDSFSLQPNAGAAGEYAGLMVIR-AYHKARGDH------------HRNVCI-IPVSAHGTNPAT 696 (1050)
Q Consensus 634 i~el~~~lael~G---~d~~~l~~~sGa~ge~a~Llair-~y~~~~G~~------------~r~~Vl-ip~saHgt~pa~ 696 (1050)
..++.+.|.++.+ ++.+ ++.++|++|+++++++++ .|+..+|.. +|.+|| ...++||..-.+
T Consensus 411 a~~LAe~L~~~~~~~~l~rV-ffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GA 489 (817)
T PLN02974 411 ALRAAELLLGGPGKGWASRV-FFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGA 489 (817)
T ss_pred HHHHHHHHHhccCCCCCCEE-EECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHH
Confidence 3467888888765 2333 678899999999999884 576656642 355666 577999977665
Q ss_pred HHhCCCE--------------EEEEcCCC-------------CC-----------------------------CCCHHHH
Q 001579 697 AAMCGMK--------------IVSVGTDA-------------KG-----------------------------NINIEEL 720 (1050)
Q Consensus 697 a~~~G~~--------------vv~V~~d~-------------~g-----------------------------~iD~e~L 720 (1050)
..+.|.. ..+++... .+ ....+.+
T Consensus 490 ms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~l 569 (817)
T PLN02974 490 MEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYI 569 (817)
T ss_pred HhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHH
Confidence 4433210 11111000 00 0012567
Q ss_pred HHHHHc-----CCCCEEEEEEEcC--CCcccccc---CHHHHHHHHHHcCCEEEEeccccccccccCCCCcc------c-
Q 001579 721 RKAAEA-----NRDNLSTLMVTYP--STHGVYEE---GIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI------G- 783 (1050)
Q Consensus 721 ~~~i~~-----~~~~taaV~vt~P--n~~Gv~~~---di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~------G- 783 (1050)
++.|++ ..+++++|+++.. ...|++.+ .++++.++|++||+++|+|.+ +.||.+.|.+ |
T Consensus 570 e~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV----~TGfGRtG~~fa~e~~gv 645 (817)
T PLN02974 570 EQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEV----FTGLWRLGVESAWELLGC 645 (817)
T ss_pred HHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeec----ccCCCcccchhhHHhcCC
Confidence 777753 3467999998863 45577642 589999999999999999976 7888888764 2
Q ss_pred -CcEEEeCCccccccCCCCCC-CcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHH
Q 001579 784 -ADVCHLNLHKTFCIPHGGGG-PGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIA 861 (1050)
Q Consensus 784 -aDv~~~~~hKtf~~P~g~GG-Pg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~ 861 (1050)
+|++++ .|.++ || -.+|.+.+++++...+.+.. ...... ...++.|+++.++++.+.|.
T Consensus 646 ~PDIi~~--gKgLt-----gG~~Plaa~l~~~~I~~~f~~~~-----------~~~~~~-hg~Ty~gnpl~cAaala~L~ 706 (817)
T PLN02974 646 KPDIACY--AKLLT-----GGLVPLAATLATEEVFEAFRGPS-----------KLDALL-HGHSYTAHPMGCAAAAKALQ 706 (817)
T ss_pred CCCEEee--ccccc-----CCCCccEEEEEcHHHHHhhcccc-----------ccCCcc-cCCCCCcCHHHHHHHHHHHH
Confidence 699987 59874 45 35778888887766543210 000000 11235578888889999999
Q ss_pred HHChhhHH-HHHHHHHHHHHHHHHHHhc-c--CCee--ecCCCCccceeEEEecccccccCCC---CHHHHHHHHH-HCC
Q 001579 862 MMGSKGLT-EASKIAILNANYMAKRLEK-H--YPIL--FRGVNGTVAHEFIVDLRGLKNTAGI---EPEDVAKRLM-DYG 931 (1050)
Q Consensus 862 ~lG~eGl~-~~a~~~~~~a~yl~~~L~~-~--~~v~--~~g~~g~~~~e~i~~~~~~~~~~g~---~~~~vakrL~-d~G 931 (1050)
.+-++++. +..+.......++.++|.+ + ++.+ ..|. |.. +.+++..-+...+. -+..+.+++. ++|
T Consensus 707 ~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~-Gl~---~~iel~~~~~~~~~~~~~a~~v~~~~~~~~G 782 (817)
T PLN02974 707 WYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSL-GTV---LALELDAEGSGSGYSSLYARSVVRRLRREDG 782 (817)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEee-eeE---EEEEEecCCcccccchHHHHHHHHHHHHhCC
Confidence 98776432 2333333455666666632 1 2221 1121 211 12333210000011 1356788888 999
Q ss_pred cccCCCCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q 001579 932 FHGPTMSWPVPGTLMIEPTESESKEELDRYCDALISIR 969 (1050)
Q Consensus 932 i~~~~~~~pv~~~lrI~~te~~t~eeid~fv~aL~~i~ 969 (1050)
+++.. .++.|++.|+..++++|+++++++|.+.+
T Consensus 783 l~~r~----~Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 783 IYARP----LGNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEEEe----cCCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 99853 35789999999999999999999988754
No 488
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.42 E-value=4e-11 Score=141.22 Aligned_cols=353 Identities=16% Similarity=0.182 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHhccccCcccccccccccccCcchhhhh---cc--ccc----cccccCCCCCchhhcccHHHHHHHHHHH
Q 001579 570 EHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEM---MP--VTW----PSFANIHPFAPADQAQGYQEMFNNLGEW 640 (1050)
Q Consensus 570 E~e~~r~~~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~---~~--~~~----~~f~~~~P~~p~e~~~G~~~~i~el~~~ 640 (1050)
-.++.+.++.+..+.. ...++.||.+.+..+..... .. +.. .....|. | .+|..++.+.+.++
T Consensus 17 ~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~---~---~~G~~~LR~aia~~ 88 (409)
T PRK07590 17 FPEIARRVNAFREANP--EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYG---P---EQGYDFLREKIAEN 88 (409)
T ss_pred HHHHHHHHHHHhhhcC--CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCC---C---CCCCHHHHHHHHHH
Confidence 3467777877776542 22467888877665433211 10 000 1222233 2 35766666566666
Q ss_pred HHHhhCC--CeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCE-----------EEEE
Q 001579 641 LCTITGF--DSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMK-----------IVSV 707 (1050)
Q Consensus 641 lael~G~--d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~-----------vv~V 707 (1050)
+.+..|+ +..++..++|++.-...+ .. .. . ++++|++++..+..+...+++.|.+ ++.+
T Consensus 89 ~~~~~g~~~~~~~I~it~Ga~~al~~l--~~-~~-~----~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v 160 (409)
T PRK07590 89 DYQARGCDISADEIFISDGAKCDTGNI--LD-IF-G----PDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYL 160 (409)
T ss_pred HHHhcCCcCChhhEEECCCHHHHHHHH--HH-hc-C----CCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEe
Confidence 5555454 444555666665221222 22 11 2 4578999988777777778889987 8899
Q ss_pred cCCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-cccc-CCC-Cc
Q 001579 708 GTDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGL-TSP-GY 781 (1050)
Q Consensus 708 ~~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~gl-~~p-g~ 781 (1050)
++++++...++ +. .+++++|++++| |.+|.+- +.+++|+++|+++|++++.|.++..- ..+- ..+ ..
T Consensus 161 ~~~~~~~~~~d-----~~--~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~ 233 (409)
T PRK07590 161 PCTAENNFVPE-----LP--EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYE 233 (409)
T ss_pred ecccccCCccc-----Cc--ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhh
Confidence 98754333222 11 157889999999 5789874 36889999999999999999986321 1111 011 11
Q ss_pred c-cC-c--EEEeCCccccccCCCCCCCcceeeeecccccCCCC-CCccccCCCCCCCCCCC-CCCCCCcchhhhHHHHHH
Q 001579 782 I-GA-D--VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVSTGGIPAPEKSQ-PLGTIAAAPWGSALILPI 855 (1050)
Q Consensus 782 ~-Ga-D--v~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lp-g~~vg~~~~~~~~~~~~-~t~~i~sa~~g~~~~~~~ 855 (1050)
+ +. + |.+.++.|+|++| |.++|++++.+++.+.+- +....... . ...... ....++ ...+..
T Consensus 234 ~~~~~~~vi~~~SfSK~~~~p----GlRiG~~i~~~~li~~~~~~~~~~~~~-~-~~~~~~~~~~~~s--~~~q~a---- 301 (409)
T PRK07590 234 IEGARECAIEFRSFSKTAGFT----GTRCAYTVVPKELKGKTSDGEGVSLNS-L-WNRRQSTKFNGVS--YIVQRA---- 301 (409)
T ss_pred CCCcccceEEEecCccccCCc----CceeEEEEcCHHHhhhccccchhhhHH-H-HHHHHhhcccCcC--HHHHHH----
Confidence 1 11 2 4567888988654 788999999887765321 00000000 0 000000 001111 111211
Q ss_pred HHHHHHHHChhhHHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHH-HCCcc
Q 001579 856 SYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLM-DYGFH 933 (1050)
Q Consensus 856 a~a~l~~lG~eGl~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~-d~Gi~ 933 (1050)
+...+..-+.+-+++..+....+.+++.+.|++. +.+ +.+ .+.. -+.+++++ +.+..+++++|. ++|+.
T Consensus 302 ~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~-~g~~--f~wi~~~~-----~~~~~~~~~~l~~~~gv~ 372 (409)
T PRK07590 302 AEAVYSPEGKAQIKELIDYYMENAKIIREGLESAGFEV-YGG-VNAP--YIWVKTPD-----GMSSWDFFDKLLQEANVV 372 (409)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCce-ecC-Ccce--EEEEECCC-----CCCHHHHHHHHHHHCCEE
Confidence 1111111122334445555566778888888875 332 221 1211 24566652 356778888876 57987
Q ss_pred cC-CCCCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q 001579 934 GP-TMSWP--VPGTLMIEPTESESKEELDRYCDALISI 968 (1050)
Q Consensus 934 ~~-~~~~p--v~~~lrI~~te~~t~eeid~fv~aL~~i 968 (1050)
+. ...|. ..+.+||+. ..++++++..++.|.++
T Consensus 373 v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 373 GTPGSGFGPSGEGYFRLSA--FGSRENVLEAMERIKKA 408 (409)
T ss_pred EeChhHhCCCCCCEEEEEc--cCCHHHHHHHHHHHHhh
Confidence 53 33342 246899985 34688888888887654
No 489
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.42 E-value=1.4e-11 Score=142.87 Aligned_cols=209 Identities=19% Similarity=0.165 Sum_probs=140.0
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHH----HHHhCCCEEEEEcC
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPA----TAAMCGMKIVSVGT 709 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa----~a~~~G~~vv~V~~ 709 (1050)
..++++.++++.|.+.+ +..++|.++..+ +++ .. . ++++||++...++.... .+...|++++.++.
T Consensus 54 ~~~le~~la~l~g~~~~-~~~~sG~~ai~~-~~~---ll-~----~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 54 RGVLEQAIADLEGGDQG-FACSSGMAAIQL-VMS---LF-R----SGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred HHHHHHHHHHHhCCCcE-EEEcCHHHHHHH-HHH---Hh-C----CCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 56899999999999875 666777766532 222 11 1 45788888766654322 24568999999876
Q ss_pred CCCCCCCHHHHHHHHHcCCCCEEEEEEEcCC-CccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCCcccCcEEE
Q 001579 710 DAKGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCH 788 (1050)
Q Consensus 710 d~~g~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~GaDv~~ 788 (1050)
.|+++++++++ ++|++|++++|+ .+|... ++++|+++||++|+++++|.++... .+..|.+.|+|+++
T Consensus 124 -----~d~~~l~~~i~---~~tklv~le~P~NP~~~~~-dl~~I~~la~~~g~~lIvD~t~~~~--~~~~p~~~g~di~i 192 (366)
T PRK08247 124 -----ASLKAIEQAIT---PNTKAIFIETPTNPLMQET-DIAAIAKIAKKHGLLLIVDNTFYTP--VLQRPLEEGADIVI 192 (366)
T ss_pred -----CCHHHHHHhcc---cCceEEEEECCCCCCCcHH-HHHHHHHHHHHcCCEEEEECCCccc--cccCchhcCCcEEE
Confidence 48999999997 789999999995 678776 8999999999999999999886432 23456678999999
Q ss_pred eCCccccccCCCCCCCcceeeeec-ccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 789 LNLHKTFCIPHGGGGPGMGPIGVK-KHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 789 ~~~hKtf~~P~g~GGPg~G~i~v~-~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
.+++|+++. .++-..|+++++ +.+...+... + ... ..+.+++ .+|..+ .+-+-
T Consensus 193 ~S~sK~~~g---~~d~~~G~iv~~~~~l~~~~~~~------------~-~~~-g~~~s~~-------~a~l~~--~~l~t 246 (366)
T PRK08247 193 HSATKYLGG---HNDVLAGLVVAKGQELCERLAYY------------Q-NAA-GAVLSPF-------DSWLLI--RGMKT 246 (366)
T ss_pred eecceeccC---CCceeeeEEecChHHHHHHHHHH------------H-Hhc-CCCCChH-------HHHHHH--hccCc
Confidence 999999851 122246777775 4443322100 0 000 1111111 123222 23344
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc
Q 001579 868 LTEASKIAILNANYMAKRLEKH 889 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~ 889 (1050)
+....++..+++..+++.|+++
T Consensus 247 l~~r~~~~~~~a~~l~~~L~~~ 268 (366)
T PRK08247 247 LALRMRQHEENAKAIAAFLNEQ 268 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 5555566778999999999986
No 490
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.41 E-value=3e-11 Score=138.64 Aligned_cols=273 Identities=16% Similarity=0.123 Sum_probs=165.4
Q ss_pred HHHHHHHHHhhCCCe-eeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCC
Q 001579 635 NNLGEWLCTITGFDS-FSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKG 713 (1050)
Q Consensus 635 ~el~~~lael~G~d~-~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g 713 (1050)
.+|++.+++.+|.+. .++..+.|++.....+ .+.+ . +++ |+++...+..+...+++.|++++.++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l--~~~~--~----~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~-- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRAL--PALL--P----RGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA-- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHH--HHhc--C----CCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--
Confidence 478899999999974 4556666655222222 2221 1 234 77777655445555788999999988643
Q ss_pred CCCHHHHHHHHHcCCCCEEEEEEEcCC-Cccccc--cCHHHHHHHHHHcCCEEEEeccccccccccCCCCcc-cCc--EE
Q 001579 714 NINIEELRKAAEANRDNLSTLMVTYPS-THGVYE--EGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYI-GAD--VC 787 (1050)
Q Consensus 714 ~iD~e~L~~~i~~~~~~taaV~vt~Pn-~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg~~-GaD--v~ 787 (1050)
+. +. +.++++++++|| .+|.+- +.+++|++.+.+++.++++|.++..- ........+ ..+ ++
T Consensus 125 ----~~----~~---~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~-~~~~s~~~~~~~~~vi~ 192 (339)
T PRK06959 125 ----DT----LP---AALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADT-LPAASLAAHTDRPGLVV 192 (339)
T ss_pred ----hh----cc---ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccC-CCcccchhccCCCCEEE
Confidence 22 22 345678999995 789875 24566666677889999999985421 110000111 122 55
Q ss_pred EeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhh
Q 001579 788 HLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKG 867 (1050)
Q Consensus 788 ~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eG 867 (1050)
..++.|.|++ .|.++|++++.+++.+.+... ...-++++ ..+ .++.+++. ..+-
T Consensus 193 l~SfSK~~gl----~GlRiGy~v~~~~li~~l~~~--------------~~~~~vs~--~~q----~a~~~~L~--~~~~ 246 (339)
T PRK06959 193 LRSVGKFFGL----AGVRAGFVLAAPALLAALRDA--------------LGAWTVSG--PAR----HAVRAAFA--DAAW 246 (339)
T ss_pred EecChhhcCC----cchheEEEecCHHHHHHHHHh--------------cCCCCCcH--HHH----HHHHHHhC--cHHH
Confidence 6677787764 478899999987766554210 00011221 111 12222222 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEE
Q 001579 868 LTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLM 946 (1050)
Q Consensus 868 l~~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lr 946 (1050)
.++..+......+++.+.|+++ +.+. . +.. -+.++++ +..++.++|.++||.+.. |+..+++|
T Consensus 247 ~~~~~~~~~~~r~~l~~~L~~~g~~~~-~---~~~--f~~~~~~--------~~~~l~~~l~~~GI~vr~--~~~~~~lR 310 (339)
T PRK06959 247 QAAMRERLAADGARLAALLRAHGFAVH-A---TPL--FSWTDDP--------RAAALHAALARRGIWTRY--FAPPPSVR 310 (339)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCcc-C---cce--EEEEeCC--------CHHHHHHHHHhCCeEEEE--CCCCCeEE
Confidence 3444455556788899999875 4432 1 111 1234432 457899999999999863 33347899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001579 947 IEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 947 I~~te~~t~eeid~fv~aL~~i~~ei~~ 974 (1050)
|+++ .+.+|+++|+++|+++.+.+..
T Consensus 311 isi~--~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 311 FGLP--ADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred EECC--CCHHHHHHHHHHHHHHHHHHhh
Confidence 9974 3568999999999998887765
No 491
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.41 E-value=3.7e-11 Score=126.62 Aligned_cols=276 Identities=21% Similarity=0.224 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc---
Q 001579 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL--- 288 (1050)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~--- 288 (1050)
.|..|-..+++++|||. +-.+.|+-.+-.|+.-++. ++||-|+++.++|-++.-. |++.|.++..+|-
T Consensus 62 pI~~F~~dlaeFlg~D~--~R~t~GARe~KfavMhal~---~~gd~vV~D~~aHYttyvA----AEragl~v~eVp~tg~ 132 (382)
T COG1103 62 PIKDFLEDLAEFLGMDE--VRVTAGAREAKFAVMHALC---KEGDWVVVDSLAHYTTYVA----AERAGLNVAEVPNTGY 132 (382)
T ss_pred cHHHHHHHHHHHhCCce--eeecccchhhHHHHHHHhc---cCCCEEEEcCcchHHHHHH----HHhcCCeEEecCCCCC
Confidence 45677788999999998 5667777766666555542 3799999999999776655 4567889988863
Q ss_pred -------h----hhhc-c---CCCeeEEEEEcC-CCCeeEccHHHHHHHHHhCCcEEEE-EecCccccCCC-CCCcccce
Q 001579 289 -------K----DIDY-K---SGDVCGVLVQYP-GTEGEVLDYGDFIKNAHANGVKVVM-ATDLLALTILK-PPGELGAD 350 (1050)
Q Consensus 289 -------~----~l~~-l---~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~~galliV-~a~~~alg~l~-~pg~~GaD 350 (1050)
+ .++. . .+.+.+.++|+| ..+|.+.|.+.++++||++|+++++ +|- ..|-++ +..+.|+|
T Consensus 133 Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AY--t~Grmpvs~ke~g~D 210 (382)
T COG1103 133 PEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAY--TVGRMPVSGKEIGAD 210 (382)
T ss_pred CceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecce--eeccccccccccCCC
Confidence 1 1222 1 234677889999 4689999999999999999999999 443 444332 44688999
Q ss_pred EEEecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchh--HHH
Q 001579 351 IVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQ--ALL 427 (1050)
Q Consensus 351 ivvgs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~--~l~ 427 (1050)
++|||+ |++.. .|| .|+++.++++.+.+- |..|... -+.-.. ---||.. ++.
T Consensus 211 FiVgSGHKsmAA----s~P-iGvl~~~eE~ae~V~-r~Sg~~~---~~KEve----------------llGCT~rGapiv 265 (382)
T COG1103 211 FIVGSGHKSMAA----SAP-IGVLAMSEEWAEIVL-RRSGRAF---PKKEVE----------------LLGCTVRGAPIV 265 (382)
T ss_pred EEEecCccchhc----cCC-eeEEeehhHHHHHHH-hhccccc---ccceee----------------eecccccCchHH
Confidence 999999 77743 232 689999998765431 1111000 000011 1125543 345
Q ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCc-cEEEEecCCHHHHHHHHHHcCceeee----
Q 001579 428 ANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFF-DTVKVKCADAHAIASAAYKIEMNLRV---- 501 (1050)
Q Consensus 428 a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~~~-~~v~i~~~~~~~i~~~L~~~GI~~~~---- 501 (1050)
-+||++= +-.+-. ..++...++|+++.+.|+++||++.++. |.- |-+.|..|.-.+|++.-..+|+++..
T Consensus 266 TlmASfP---~V~eRV-krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~ 341 (382)
T COG1103 266 TLMASFP---HVVERV-KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKK 341 (382)
T ss_pred HHHhcCH---HHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHh
Confidence 5666651 111122 2345567899999999999987887753 333 34556655445555555455554421
Q ss_pred -----ecC---CeEEEEeccCCCHHHHHHHHHHHh
Q 001579 502 -----VDS---NTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 502 -----~~~---~~lris~~e~~t~edId~lv~~l~ 528 (1050)
+.+ ..+-+| ...-+.|+++..+++|+
T Consensus 342 RgI~GI~~G~Tk~~K~s-vyGl~~Eqve~V~~afk 375 (382)
T COG1103 342 RGIHGIQPGQTKYFKLS-VYGLSWEQVEYVVDAFK 375 (382)
T ss_pred cCccccccCceeEEEEE-eecCCHHHHHHHHHHHH
Confidence 011 234444 24468999999999986
No 492
>PRK06855 aminotransferase; Validated
Probab=99.41 E-value=6e-11 Score=140.72 Aligned_cols=312 Identities=16% Similarity=0.136 Sum_probs=177.3
Q ss_pred cccHHHHHHHHHHHHHHhhCCC--eeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH-HHhCCCE
Q 001579 627 AQGYQEMFNNLGEWLCTITGFD--SFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT-AAMCGMK 703 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G~d--~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~-a~~~G~~ 703 (1050)
.+|..++.+.+.+++.+..|.+ ..++..++|++.- ..+++. . . .+++.|++++..+..+... ....|++
T Consensus 72 ~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a--l~~~~~-l-~----~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~ 143 (433)
T PRK06855 72 TKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA--IAKIYG-L-L----RREARVIGPSPAYSTHSSAEAAHAGYP 143 (433)
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH--HHHHHH-h-c----CCCCeEEEeCCCCchHHHHHHHhcCCe
Confidence 3677777777777777665654 3345555665422 222222 1 1 2457899988766544332 2356999
Q ss_pred EEEEcCCCC--CCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc-ccccC
Q 001579 704 IVSVGTDAK--GNINIEELRKAAEANRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA-QVGLT 777 (1050)
Q Consensus 704 vv~V~~d~~--g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a-l~gl~ 777 (1050)
++.++++++ ..+|+++|+++++++ ++++++++++| |.+|.+- +.+++|+++|+++|++++.|.++..- ..+-.
T Consensus 144 ~v~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~ 222 (433)
T PRK06855 144 PVTYRLDPENNWYPDLDDLENKVKYN-PSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKK 222 (433)
T ss_pred EEEEecccccCCCCCHHHHHHHHhcC-CCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Confidence 999998753 368999999999632 46788998999 5788774 35889999999999999999985311 11100
Q ss_pred -CC-Ccc---cCcEEEeCCccccccCCCCCCCcceeeeecc-----cccCCCCCCccccCCCCCCCCCCCCCCCCCcchh
Q 001579 778 -SP-GYI---GADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-----HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPW 847 (1050)
Q Consensus 778 -~p-g~~---GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~-----~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~ 847 (1050)
.+ ..+ +--|.+.++.|+|++| |.++|++++.. .+...+. .. . ..+. ...+.+..
T Consensus 223 ~~sl~~~~~~~~~I~~~S~SK~~~~p----GlRiG~ii~p~~~~~~~~~~~~~-~~-~---------~~~~-~~~~~~~~ 286 (433)
T PRK06855 223 TVPLSEVIGDVPGIALKGISKELPWP----GSRCGWIEVYNADKDEVFKKYIN-SI-L---------NAKM-IEVCSTTL 286 (433)
T ss_pred CCCHHHHcCcCCeEEEecCccccCCC----cceEEEEEEeCCchhhHHHHHHH-HH-H---------Hhhc-cccCCChH
Confidence 11 111 1126778899999765 78999999731 1111110 00 0 0000 01111112
Q ss_pred hhHHHHHHHHHHHHHHC--hhhHHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEeccccc--cc-----C--
Q 001579 848 GSALILPISYTYIAMMG--SKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLK--NT-----A-- 916 (1050)
Q Consensus 848 g~~~~~~~a~a~l~~lG--~eGl~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~--~~-----~-- 916 (1050)
.|.. +..++. -+ .+-+++..+....+.+.+.+.|+++..+.+..+.|.++ +.+++++-. +. .
T Consensus 287 ~Q~a----~~~~l~-~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~--~w~~l~~~~~~~~~~~~~~~~ 359 (433)
T PRK06855 287 PQMA----IPRIMS-HPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFY--MTVVFEDGVLNNKQSLPIENP 359 (433)
T ss_pred HHHH----HHHhhc-CCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEE--EeeccccccccccccCCcchh
Confidence 2221 111221 12 12344555555567778888887642222222333332 455654200 00 0
Q ss_pred -------------CCCHHHHHHH-HHHCCccc-CCCCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q 001579 917 -------------GIEPEDVAKR-LMDYGFHG-PTMSW-PVPGTLMIEPTESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 917 -------------g~~~~~vakr-L~d~Gi~~-~~~~~-pv~~~lrI~~te~~t~eeid~fv~aL~~i~~e 971 (1050)
..+..+++.. +.+.|+.+ |...| +....+||++.. .+.++|++.++.|++++++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 360 EVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred hhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHHHH
Confidence 0123456655 56889874 44445 323469999976 4688898888888887764
No 493
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=3e-11 Score=138.51 Aligned_cols=273 Identities=18% Similarity=0.236 Sum_probs=169.9
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHHhCCCEEEEEcCCCCCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGN 714 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~~~G~~vv~V~~d~~g~ 714 (1050)
.++++++++.+|.+..++..++|++.- ..++++.+ ++++|+++...++.+...+++.|.+++.++.++++.
T Consensus 58 ~~lr~~ia~~~~~~~~~I~~t~G~~~~--l~~~~~~~-------~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 128 (337)
T PRK03967 58 DPLREAIAEFYGLDAENIAVGNGSDEL--ISYLVKLF-------EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFT 128 (337)
T ss_pred HHHHHHHHHHhCcCcceEEEcCCHHHH--HHHHHHHh-------CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence 467788888888887666666666522 22333322 246899988766555555788999999999987778
Q ss_pred CCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcCCEEEEeccccccccccCCCC--cccCc-EEEeC
Q 001579 715 INIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPG--YIGAD-VCHLN 790 (1050)
Q Consensus 715 iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G~~v~vD~A~~~al~gl~~pg--~~GaD-v~~~~ 790 (1050)
+|++++++++ ++++++++++| |.+|.+. +.++|.++++ +|+++++|.++.. +..-..+. +.... +++.+
T Consensus 129 ~d~~~l~~~~----~~~~~v~~~~P~NPtG~~~-~~~~l~~i~~-~~~~ii~De~y~~-~~~~~~~~~~~~~~~vi~l~S 201 (337)
T PRK03967 129 IDGERIAEKA----KNASAVFICSPNNPTGNLQ-PEEEILKVLE-TGKPVVLDEAYAE-FSGKSLIGLIDEYPNLILLRT 201 (337)
T ss_pred cCHHHHHHhc----cCCCEEEEeCCCCCCCCCC-CHHHHHHHHh-cCCEEEEECchhh-hcccchHHHHhhCCCEEEEec
Confidence 9999998865 46778889999 5799887 6899999995 6999999998632 11100000 11112 55677
Q ss_pred CccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHChhhHHH
Q 001579 791 LHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTE 870 (1050)
Q Consensus 791 ~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG~eGl~~ 870 (1050)
+.|+|++| |-++|++++++++...+-.. ....+++ ..++.. +...+. ..+-+.+
T Consensus 202 ~SK~~~l~----GlRiG~iv~~~~~i~~~~~~--------------~~~~~~~--~~~q~~----~~~~l~--~~~~~~~ 255 (337)
T PRK03967 202 FSKAFGLA----GIRAGYAIANEEIIDALYRI--------------KPPFSLN--ILTMKI----VRLALD--HYDLIEE 255 (337)
T ss_pred chHhhcch----hhhheeeecCHHHHHHHHhh--------------cCCCCCC--HHHHHH----HHHHHh--CHHHHHH
Confidence 88988654 78899999987665443110 0001111 112211 111111 2222333
Q ss_pred HHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEecccccccCCCCHHHHHHHHHHCCcccCCCCCCCCCEEEEEcC
Q 001579 871 ASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPT 950 (1050)
Q Consensus 871 ~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~~~~g~~~~~vakrL~d~Gi~~~~~~~pv~~~lrI~~t 950 (1050)
..+...++.+.+.+.|.+. .+++ .+.+ +++++ ++.+.|.++|+.+........+.+||++.
T Consensus 256 ~~~~~~~~r~~l~~~L~~~---~~~~-~~~~---~~~~~------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~ 316 (337)
T PRK03967 256 RIDYIIKERERVRRELGEY---AYPS-DANF---LLLKL------------DAYDYLLENGIVVRKLSGRLEGHIRVTVG 316 (337)
T ss_pred HHHHHHHHHHHHHHHhccC---cCCC-CCcE---EEEhH------------HHHHHHHHCCEEEEeCCCCCCCeEEEecC
Confidence 3444556667777777653 1211 1211 23321 36788889999875432112478999875
Q ss_pred CCCCHHHHHHHHHHHHHHHHH
Q 001579 951 ESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 951 e~~t~eeid~fv~aL~~i~~e 971 (1050)
+.++.++|+++|..+.+.
T Consensus 317 ---~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 317 ---KREENDEFIKALKEIKEG 334 (337)
T ss_pred ---CHHHHHHHHHHHHHHHHh
Confidence 568899999999877543
No 494
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=7.7e-11 Score=136.21 Aligned_cols=265 Identities=13% Similarity=0.072 Sum_probs=174.1
Q ss_pred HHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCc----
Q 001579 213 LLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---- 288 (1050)
Q Consensus 213 l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~---- 288 (1050)
..++++.+|+++|.++.++.+++|++.++..+..++ . ++||+|+++.-.++.+...++ ..|++++.++.
T Consensus 66 ~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~-~--~~gd~v~~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~ 138 (359)
T PRK03158 66 APELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRAL-L--NPGTNTVMAEPTFSQYRHNAI----IEGAEVREVPLKDGG 138 (359)
T ss_pred HHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHH-h--CCCCEEEEcCCCHHHHHHHHH----HcCCeEEEEecCCCC
Confidence 345778999999998889989999887766554443 2 278999999988888766643 34777777653
Q ss_pred ---hhhhc-cCCCeeEEEEEcC-CCCeeEccHHHHHHHHHh--CCcEEEEEecCccccCCC----CC----CcccceEEE
Q 001579 289 ---KDIDY-KSGDVCGVLVQYP-GTEGEVLDYGDFIKNAHA--NGVKVVMATDLLALTILK----PP----GELGADIVV 353 (1050)
Q Consensus 289 ---~~l~~-l~~~t~~V~v~~p-n~~G~i~di~~I~~~ah~--~galliV~a~~~alg~l~----~p----g~~GaDivv 353 (1050)
+++++ +++++++|++.+| |.+|.+.+.++|.++++. +|++++++ +........ ++ ...+-.|++
T Consensus 139 ~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~~~~vi~~ 217 (359)
T PRK03158 139 HDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLD-EAYYEYVTAEDYPDTLPLLEKYENLIVL 217 (359)
T ss_pred cCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE-CchHhhcCCcccccHHHHHHhcCCEEEE
Confidence 34544 6678899999998 789999999999888887 58888884 332211110 11 123456888
Q ss_pred ecC-ccccccCCCCCcceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHH
Q 001579 354 GSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAA 432 (1050)
Q Consensus 354 gs~-k~~g~P~~~GGP~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa 432 (1050)
+|. |.||.| |--.||+.+++++++.+- +.+.+ .+++......+++
T Consensus 218 ~S~SK~~g~~----GlRiG~~v~~~~~~~~~~----------------------------~~~~~--~~~~~~~q~~~~~ 263 (359)
T PRK03158 218 RTFSKAYGLA----ALRVGYGIASEELIEKLN----------------------------IARPP--FNTTRIAQYAAIA 263 (359)
T ss_pred EechHhhcCc----chhhehhcCCHHHHHHHH----------------------------HhcCC--CCCCHHHHHHHHH
Confidence 886 887543 122488888877766541 00111 1222221111111
Q ss_pred HHHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC-CCccEEEEecCC-HHHHHHHHHHcCceeeee----cCCe
Q 001579 433 MYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL-PFFDTVKVKCAD-AHAIASAAYKIEMNLRVV----DSNT 506 (1050)
Q Consensus 433 ~y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~-~~~~~v~i~~~~-~~~i~~~L~~~GI~~~~~----~~~~ 506 (1050)
+ +...+-++++.+...+..+++.+.|++.| +++... ..| +.+.++. ..++.+.|.++||.+... .++.
T Consensus 264 ~---l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~g~~--i~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~ 337 (359)
T PRK03158 264 A---LEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYYPSQTNF--IFVDTGRDANELFEALLKKGYIVRSGAALGFPTG 337 (359)
T ss_pred H---hcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeCCCcCcE--EEEECCCCHHHHHHHHHHCCeEEeeCCCCCCCCe
Confidence 1 11122245666666777778888888886 776532 222 3344443 788999999999988652 2578
Q ss_pred EEEEeccCCCHHHHHHHHHHHh
Q 001579 507 VTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 507 lris~~e~~t~edId~lv~~l~ 528 (1050)
+|+++. +.+|+++|+++|+
T Consensus 338 iRi~~~---~~~~~~~l~~al~ 356 (359)
T PRK03158 338 VRITIG---LKEQNDKIIELLK 356 (359)
T ss_pred EEEecC---CHHHHHHHHHHHH
Confidence 999977 8999999999986
No 495
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.40 E-value=2.6e-11 Score=140.57 Aligned_cols=281 Identities=17% Similarity=0.165 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHhcCCCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCch--
Q 001579 212 SLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLK-- 289 (1050)
Q Consensus 212 ~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~-- 289 (1050)
.+.+|++.+++++|.+ ++..+++||+|.++++.++.+. +|++|+++...++++..++.. .|.+++.+|++
T Consensus 26 ~~~~fE~~~a~~~g~~--~~~~~~sgt~Al~~al~~l~~~--~gdeVi~p~~t~~~~~~ai~~----~G~~pv~~Di~~~ 97 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVK--YAVAVSSGTSALHLALRALGLG--PGDEVIVPAYTFPATASAILW----AGAEPVFVDIDPE 97 (363)
T ss_dssp HHHHHHHHHHHHHTSS--EEEEESSHHHHHHHHHHHTTGG--TTSEEEEESSS-THHHHHHHH----TT-EEEEE-BETT
T ss_pred HHHHHHHHHHHHhCCC--eEEEeCChhHHHHHHHHhcCCC--cCceEecCCCcchHHHHHHHH----hccEEEEEeccCC
Confidence 3566889999999955 4889999999999999887765 899999999999999998753 58899998764
Q ss_pred -------hhhc-cCCCeeEEEEEcCCCCeeEccHHHHHHHHHhCCcEEEEEecCccccCC---CCCCcccceEEEecC--
Q 001579 290 -------DIDY-KSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATDLLALTIL---KPPGELGADIVVGSA-- 356 (1050)
Q Consensus 290 -------~l~~-l~~~t~~V~v~~pn~~G~i~di~~I~~~ah~~galliV~a~~~alg~l---~~pg~~GaDivvgs~-- 356 (1050)
++++ ++++|++|++++ ++|...|+++|.++|+++|+.++-++ .+++|.. +..|.+| |+.++|.
T Consensus 98 ~~~id~~~~~~~i~~~t~ai~~~h--~~G~~~d~~~i~~~~~~~~i~lIeD~-a~a~g~~~~g~~~G~~g-d~~~fSf~~ 173 (363)
T PF01041_consen 98 TLNIDPEALEKAITPKTKAILVVH--LFGNPADMDAIRAIARKHGIPLIEDA-AQAFGARYKGRPVGSFG-DIAIFSFHP 173 (363)
T ss_dssp TSSB-HHHHHHHHHTTEEEEEEE---GGGB---HHHHHHHHHHTT-EEEEE--TTTTT-EETTEETTSSS-SEEEEESST
T ss_pred cCCcCHHHHHHHhccCccEEEEec--CCCCcccHHHHHHHHHHcCCcEEEcc-ccccCceeCCEeccCCC-CceEecCCC
Confidence 4555 788999999987 88999999999999999999999843 3455532 2346676 9999996
Q ss_pred -ccccccCCCCCcceEEEEEeh-hhhhcCC-CcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHH
Q 001579 357 -QRFGVPMGYGGPHAAFLATSQ-EYKRMMP-GRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAM 433 (1050)
Q Consensus 357 -k~~g~P~~~GGP~~G~la~~~-~~~r~lp-grivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~ 433 (1050)
|.+ +.| .+|++.+++ ++.+++. -|-.|...+ ..++......+..+.-+..+.|++
T Consensus 174 ~K~i--~~g----eGG~v~~~~~~~~~~~~~~~~~g~~~~----------------~~~~~~~~~~~g~n~rm~~~~AAi 231 (363)
T PF01041_consen 174 TKII--TTG----EGGAVVTNDPELAERARALRNHGRSRD----------------AFRRYRHELPPGYNFRMSELQAAI 231 (363)
T ss_dssp TSSS---SS----S-EEEEESTHHHHHHHHHHTBTTEETS----------------ECSTTEESSSS--B-B-BHHHHHH
T ss_pred CCCC--cCC----CCeeEEecHHHHHHHhhhhhccCcCcc----------------ccccccccccCCcccccHHHHHHH
Confidence 444 222 247888876 3333321 000111100 000000000000111111223333
Q ss_pred HHHHhCcccHHHHHHHHHHHHHHHHHHHhcCCCEEEcCC---C---CccEEEEecC-----CHHHHHHHHHHcCceeeee
Q 001579 434 YAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQGL---P---FFDTVKVKCA-----DAHAIASAAYKIEMNLRVV 502 (1050)
Q Consensus 434 y~~~~g~~Gl~~ia~~~~~~a~~l~~~L~~~G~~~l~~~---~---~~~~v~i~~~-----~~~~i~~~L~~~GI~~~~~ 502 (1050)
-+..+ +-++++.++-.+++.++.+.|.++.++..... . ....+.+.++ .-.++.+.|.++||..+..
T Consensus 232 gl~QL--~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~ 309 (363)
T PF01041_consen 232 GLAQL--KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPH 309 (363)
T ss_dssp HHHHH--HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCS
T ss_pred HHHHH--HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCccccc
Confidence 22222 34667777778999999999999865755421 1 1123445444 2678999999999965321
Q ss_pred c----------------------------CCeEEEEeccCCCHHHHHHHHHHHh
Q 001579 503 D----------------------------SNTVTASFDETTTLEDVDKLFIVFA 528 (1050)
Q Consensus 503 ~----------------------------~~~lris~~e~~t~edId~lv~~l~ 528 (1050)
. ...+.+-++..-|.+|+++++++|+
T Consensus 310 ~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 310 YPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred ccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 0 1357888888899999999998874
No 496
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.40 E-value=2.5e-11 Score=140.80 Aligned_cols=318 Identities=17% Similarity=0.196 Sum_probs=191.9
Q ss_pred HHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCc-cHHHHHhCCCEEEEEcCC--
Q 001579 634 FNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGT-NPATAAMCGMKIVSVGTD-- 710 (1050)
Q Consensus 634 i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt-~pa~a~~~G~~vv~V~~d-- 710 (1050)
+.+|++.+++++|++.+ +.+++|+.|+.. +. . . +.+++++| |...|.. ..+.....|...+.++.+
T Consensus 73 ~~~lE~~va~~~G~~~a-v~v~sGT~Al~l-l~--~-l----~l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea 141 (450)
T TIGR02618 73 FYHLERTVRELYGFKYV-VPTHQGRGAENL-LS--Q-I----AIKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEA 141 (450)
T ss_pred HHHHHHHHHHHHCCCeE-EEcCCHHHHHHH-HH--H-h----CCCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecccc
Confidence 55889999999999985 566788887642 21 1 1 12355655 5554422 222246788876666443
Q ss_pred --------CCCCCCHHHHHHHHHcCC-CCEEEEEEEcCC-Cc-cccc--cCHHHHHHHHHHcCCEEEEeccccc--ccc-
Q 001579 711 --------AKGNINIEELRKAAEANR-DNLSTLMVTYPS-TH-GVYE--EGIDEICKIIHDNGGQVYMDGANMN--AQV- 774 (1050)
Q Consensus 711 --------~~g~iD~e~L~~~i~~~~-~~taaV~vt~Pn-~~-Gv~~--~di~eI~~la~~~G~~v~vD~A~~~--al~- 774 (1050)
.+|++|+++|+++|+++. +++++|.+++++ .. |..- .++++|.++|+++|+.||.|+|+.. +..
T Consensus 142 ~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I 221 (450)
T TIGR02618 142 HDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFI 221 (450)
T ss_pred cccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhh
Confidence 248999999999998532 356667777764 34 5541 3799999999999999999999854 332
Q ss_pred -----ccC-CCC-----c--ccCcEEEeCCccccccCCCCCCCcceeeeecc-cccCCCCCCccccCCCCCCCCCCCCCC
Q 001579 775 -----GLT-SPG-----Y--IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK-HLAPFLPSHPVVSTGGIPAPEKSQPLG 840 (1050)
Q Consensus 775 -----gl~-~pg-----~--~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~-~l~~~lpg~~vg~~~~~~~~~~~~~t~ 840 (1050)
|+. .|- + -.+|.|.+++||+++.|. .|+|+.++ ++...+....+-. ++-...+
T Consensus 222 ~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~------GG~l~~~d~~l~~k~r~~~~~~-------eG~~tyG 288 (450)
T TIGR02618 222 KEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI------GGFLCMNDDEMFQSAKELVVVF-------EGMPSYG 288 (450)
T ss_pred hcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC------ceEEEeCCHHHHHHHHHHhhhc-------CCccccC
Confidence 111 111 1 268999999999986554 46788664 4444332110000 0000001
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHChhhHH-HHHHHHHHHHHHHHHHHhcc-CCeeecCCCCccceeEEEecccccc---c
Q 001579 841 TIAAAPWGSALILPISYTYIAMMGSKGLT-EASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKN---T 915 (1050)
Q Consensus 841 ~i~sa~~g~~~~~~~a~a~l~~lG~eGl~-~~a~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~i~~~~~~~~---~ 915 (1050)
.+++ ..+.+.+.+ +. +.+. ...++.+.+++||.++|.+. +++..+ .-.|.+.+|...|.. .
T Consensus 289 gla~-----r~~~ala~g-L~----e~~~~~y~~~r~~~a~~La~~L~~~Gvpv~~p----~ggh~V~vda~~~lph~~~ 354 (450)
T TIGR02618 289 GLAG-----RDMEAMAIG-IR----EAVDYEYIEHRVKQVRYLGDKLKAAGVPIVEP----VGGHAVFLDARRFLPHIPQ 354 (450)
T ss_pred chhh-----hhHHHHHHH-HH----HhhhHHHHHHHHHHHHHHHHHHHHCCCcccCC----CCcceEEEEhHHhCCCCCh
Confidence 1111 011111111 11 2222 23445566799999999886 665422 224778888765421 1
Q ss_pred CCCCHHHHHHHHH-HCCccc---CCCC---CC--------CCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q 001579 916 AGIEPEDVAKRLM-DYGFHG---PTMS---WP--------VPGTLMIEPTE-SESKEELDRYCDALISIREEIAQIENGK 979 (1050)
Q Consensus 916 ~g~~~~~vakrL~-d~Gi~~---~~~~---~p--------v~~~lrI~~te-~~t~eeid~fv~aL~~i~~ei~~~~~~~ 979 (1050)
....+..++-.|. +.||-. +++. .| .-..+|+.++- ..|.+.+|..+++|+.+.+.-..|.-=+
T Consensus 355 ~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~~~g~~ 434 (450)
T TIGR02618 355 DQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDDIRGLK 434 (450)
T ss_pred hhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhhcCceE
Confidence 2235667777775 667753 3332 12 12567877764 5678999999999999999888876445
Q ss_pred CCCCCCcccc
Q 001579 980 ADIHNNVLKG 989 (1050)
Q Consensus 980 ~~~~~~~~~~ 989 (1050)
+..+|.+|++
T Consensus 435 ~~~ep~~lr~ 444 (450)
T TIGR02618 435 MVYEPKQLRF 444 (450)
T ss_pred Eeecchhhhh
Confidence 5556666553
No 497
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.39 E-value=9e-11 Score=139.48 Aligned_cols=308 Identities=14% Similarity=0.152 Sum_probs=181.6
Q ss_pred cccHHHHHHHHHHHHHHhhC----CCeeeeccCchHH-HHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHHHH-hC
Q 001579 627 AQGYQEMFNNLGEWLCTITG----FDSFSLQPNAGAA-GEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAA-MC 700 (1050)
Q Consensus 627 ~~G~~~~i~el~~~lael~G----~d~~~l~~~sGa~-ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~a~-~~ 700 (1050)
..|..++...+.+++.+.+| .+...+..++|++ +.+.. +..+. .++|.|+++...++.+..... ..
T Consensus 94 ~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l---~~~l~-----~pGD~Vlv~~P~Y~~f~~~~~~~~ 165 (447)
T PLN02607 94 YHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELL---TFILA-----DPGDALLVPTPYYPGFDRDLRWRT 165 (447)
T ss_pred CcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHH---HHHhC-----CCCCEEEEcCCCCcchHHHHHhcC
Confidence 36877777777777777665 3333455555554 33222 22221 256889999988877766555 57
Q ss_pred CCEEEEEcCCCC--CCCCHHHHHHHHHc---CCCCEEEEEEEcC-CCccccc--cCHHHHHHHHHHcCCEEEEecccccc
Q 001579 701 GMKIVSVGTDAK--GNINIEELRKAAEA---NRDNLSTLMVTYP-STHGVYE--EGIDEICKIIHDNGGQVYMDGANMNA 772 (1050)
Q Consensus 701 G~~vv~V~~d~~--g~iD~e~L~~~i~~---~~~~taaV~vt~P-n~~Gv~~--~di~eI~~la~~~G~~v~vD~A~~~a 772 (1050)
|++++.|+++.+ +.+|++++++++++ .+.++++|++++| |.+|.+. +.+++|.++|+++|+.+++|.++...
T Consensus 166 g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~ 245 (447)
T PLN02607 166 GVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGS 245 (447)
T ss_pred CcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecccccc
Confidence 999999998754 46899999999863 2357999999999 5789764 35899999999999999999986432
Q ss_pred c-c--ccCCCC----ccc----Cc--EEEeCCccccccCCCCCCCcceeeee-cccccCCCCCCccccCCCCCCCCCCCC
Q 001579 773 Q-V--GLTSPG----YIG----AD--VCHLNLHKTFCIPHGGGGPGMGPIGV-KKHLAPFLPSHPVVSTGGIPAPEKSQP 838 (1050)
Q Consensus 773 l-~--gl~~pg----~~G----aD--v~~~~~hKtf~~P~g~GGPg~G~i~v-~~~l~~~lpg~~vg~~~~~~~~~~~~~ 838 (1050)
. . .+.+.. ..+ .+ +++.++.|.|+.| |-++|+++. ++.+...+-. ...
T Consensus 246 ~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~----GlRvG~ivs~n~~l~~~~~~--------------~~~ 307 (447)
T PLN02607 246 VFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLP----GFRVGTIYSYNDKVVTTARR--------------MSS 307 (447)
T ss_pred ccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCC----cceEEEEEEcCHHHHHHHHH--------------Hhh
Confidence 1 1 111100 111 12 3456788888654 788999997 3444322110 000
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHHChhh-----HHHHHHHHHHHHHHHHHHHhccCCeeecCCCCccceeEEEeccccc
Q 001579 839 LGTIAAAPWGSALILPISYTYIAMMGSKG-----LTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLK 913 (1050)
Q Consensus 839 t~~i~sa~~g~~~~~~~a~a~l~~lG~eG-----l~~~a~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~i~~~~~~~ 913 (1050)
...+++ ..+. ++ ..++.... +.+..++..+..+.+.+.|++. .+.+..+++..+ +.++++...
T Consensus 308 ~~~~s~--~~q~-----~~--~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~~~~ag~f--vw~~L~~~~ 375 (447)
T PLN02607 308 FTLVSS--QTQH-----LL--ASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECLKGNAGLF--CWMNLSPLL 375 (447)
T ss_pred cCCCCH--HHHH-----HH--HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcccCCeeEE--EEEEchHhh
Confidence 111221 1111 11 22333322 2233344445566788888774 222222232222 456765321
Q ss_pred cc-CCCCHHHHHHHHH-HCCccc-CCCCC--CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Q 001579 914 NT-AGIEPEDVAKRLM-DYGFHG-PTMSW--PVPGTLMIEPTESESKEELDRYCDALISIREEIA 973 (1050)
Q Consensus 914 ~~-~g~~~~~vakrL~-d~Gi~~-~~~~~--pv~~~lrI~~te~~t~eeid~fv~aL~~i~~ei~ 973 (1050)
.. ......++.++|. ++|+.+ ++..| +.+|.+||+++. .++++++..++.|.+++++-+
T Consensus 376 ~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 376 ETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDRRK 439 (447)
T ss_pred cCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHHH
Confidence 10 0012346777776 479975 33334 246899999985 247788888888887776543
No 498
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.39 E-value=3.7e-11 Score=139.33 Aligned_cols=218 Identities=20% Similarity=0.211 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEc
Q 001579 633 MFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVG 708 (1050)
Q Consensus 633 ~i~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~ 708 (1050)
....+++.|++|.|.+.+.+ .+||..|..++++++. . .+++||++...+|..... ....|+++..++
T Consensus 56 t~~~le~~la~Le~g~~a~~-~~SGmaAi~~~l~~ll----~----~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d 126 (386)
T PF01053_consen 56 TVRALEQRLAALEGGEDALL-FSSGMAAISAALLALL----K----PGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVD 126 (386)
T ss_dssp HHHHHHHHHHHHHT-SEEEE-ESSHHHHHHHHHHHHS---------TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEES
T ss_pred cHHHHHHHHHHhhcccceee-ccchHHHHHHHHHhhc----c----cCCceEecCCccCcchhhhhhhhcccCcEEEEeC
Confidence 35578899999999887644 4688776655555432 1 357888877654433322 345899999987
Q ss_pred CCCCCCCCHHHHHHHHHcCCCCEEEEEEEcC-CCccccccCHHHHHHHHHHcC-CEEEEeccccccccccCCCCcccCcE
Q 001579 709 TDAKGNINIEELRKAAEANRDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNG-GQVYMDGANMNAQVGLTSPGYIGADV 786 (1050)
Q Consensus 709 ~d~~g~iD~e~L~~~i~~~~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~~G-~~v~vD~A~~~al~gl~~pg~~GaDv 786 (1050)
. .|+++|+++++ ++|++|+++.| |.+.-+. ||++|+++||++| ++++||.+ .+-..+.+|-++|+|+
T Consensus 127 ~-----~d~~~l~~~l~---~~t~~v~~EspsNP~l~v~-Dl~~i~~~a~~~g~~~~vVDnT--~atp~~~~pL~~GaDi 195 (386)
T PF01053_consen 127 P-----TDLEALEAALR---PNTKLVFLESPSNPTLEVP-DLEAIAKLAKEHGDILVVVDNT--FATPYNQNPLELGADI 195 (386)
T ss_dssp T-----TSHHHHHHHHC---TTEEEEEEESSBTTTTB----HHHHHHHHHHTTT-EEEEECT--TTHTTTC-GGGGT-SE
T ss_pred c-----hhHHHHHhhcc---ccceEEEEEcCCCcccccc-cHHHHHHHHHHhCCceEEeecc--ccceeeeccCcCCceE
Confidence 6 48999999997 79999999999 5555554 8999999999999 99999964 3333456788999999
Q ss_pred EEeCCccccccCCCCCCCcceeeeecc--cccCCCCCCccccCCCCCCCCCCCCCCCCCcchhhhHHHHHHHHHHHHHHC
Q 001579 787 CHLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMG 864 (1050)
Q Consensus 787 ~~~~~hKtf~~P~g~GGPg~G~i~v~~--~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~~~~a~a~l~~lG 864 (1050)
++.++.|.++ |.|---+|.++++. .+...+.-. .+..+...+ ..-|| +...|
T Consensus 196 vv~S~TKyl~---Ghsdv~~G~vv~~~~~~~~~~l~~~-------------~~~~G~~~~--------p~da~--ll~rg 249 (386)
T PF01053_consen 196 VVHSATKYLS---GHSDVMGGAVVVNGSSELYDRLREF-------------RRLLGATLS--------PFDAW--LLLRG 249 (386)
T ss_dssp EEEETTTTTT---TSSSE-EEEEEESSHHHHHHHHHHH-------------HHHHT-B----------HHHHH--HHHHH
T ss_pred EEeecccccc---CCcceeeEEEEECchhhhhhhhcch-------------hhhcCccch--------HHHHH--HHhcC
Confidence 9999999885 11112367888765 343322100 001112111 11233 44556
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhccC---CeeecC
Q 001579 865 SKGLTEASKIAILNANYMAKRLEKHY---PILFRG 896 (1050)
Q Consensus 865 ~eGl~~~a~~~~~~a~yl~~~L~~~~---~v~~~g 896 (1050)
-+-|.-+.++..+||..+++.|+++. .|.|+|
T Consensus 250 l~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPg 284 (386)
T PF01053_consen 250 LRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPG 284 (386)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETT
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcc
Confidence 66777778888899999999999873 356665
No 499
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.39 E-value=3e-10 Score=131.63 Aligned_cols=254 Identities=13% Similarity=0.086 Sum_probs=162.0
Q ss_pred CCCcceeEecchHHHHHHHHHHhhhhcCCCCEEEEcCCCChhHHHHHHHhccCCCeEEEEcCchhhhcc-CCCeeEEEEE
Q 001579 226 LPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTFIIASNCHPQTIDICITRADGFDIKVVVSDLKDIDYK-SGDVCGVLVQ 304 (1050)
Q Consensus 226 ~~~anasl~d~~Taa~eA~~la~~~~~~~gd~Vlvs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~l~~l-~~~t~~V~v~ 304 (1050)
.++.++.+++|++.++..+..++.. ++||+|++++-.|+.+...++ ..|++++.++ +++.+ .+++++|++.
T Consensus 84 ~~~~~I~it~G~~~~i~~~~~~l~~--~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~--~~~~l~~~~~~~v~~~ 155 (364)
T PRK07865 84 LDPAAVLPVIGSKELVAWLPTLLGL--GPGDVVVIPELAYPTYEVGAR----LAGATVVRAD--SLTELGPQRPALIWLN 155 (364)
T ss_pred CCcccEEEccChHHHHHHHHHHHcC--CCCCEEEECCCCcccHHHHHH----hcCCEEEecC--ChhhCCcccceEEEEc
Confidence 5567898889998777654443322 378999999999998877764 3588887775 23332 3578899988
Q ss_pred cC-CCCeeEcc---HHHHHHHHHhCCcEEEEEecCccccCCC--CCC---------cccceEEEecC-ccccccCCCCCc
Q 001579 305 YP-GTEGEVLD---YGDFIKNAHANGVKVVMATDLLALTILK--PPG---------ELGADIVVGSA-QRFGVPMGYGGP 368 (1050)
Q Consensus 305 ~p-n~~G~i~d---i~~I~~~ah~~galliV~a~~~alg~l~--~pg---------~~GaDivvgs~-k~~g~P~~~GGP 368 (1050)
+| |.+|.+.+ +++|+++|+++|++++++ +..+.-... .+. +..-.|+++|. |.|+.| |-
T Consensus 156 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D-e~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----Gl 230 (364)
T PRK07865 156 SPSNPTGRVLGVDHLRKVVAWARERGAVVASD-ECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLA----GY 230 (364)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEe-cchhhhccCCCCCccccccccCCccceEEEEeechhccCCC----ce
Confidence 88 78998754 678899999999999994 222211110 011 11223778886 888654 23
Q ss_pred ceEEEEEehhhhhcCCCcEEeEeecCCCCcceEEecccccccccccccCCCccchhHHHHHHHHHHHHHhCcccHHHHHH
Q 001579 369 HAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 448 (1050)
Q Consensus 369 ~~G~la~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreq~irRekaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~ 448 (1050)
-.||+..++++.+.+- +-+...+.|++......++.+ +...+-+++..+
T Consensus 231 RiG~i~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~q~~~~~~---l~~~~~~~~~~~ 279 (364)
T PRK07865 231 RAGFVAGDPALVAELL----------------------------EVRKHAGMMVPAPVQAAMVAA---LGDDAHVREQRE 279 (364)
T ss_pred eeEEEecCHHHHHHHH----------------------------HHHHhcCCCcCHHHHHHHHHH---hCCHHHHHHHHH
Confidence 4688887777665441 001111223333222222221 112233566677
Q ss_pred HHHHHHHHHHHHHhcCCCEEEcCC--CCccEEEEecCC-HHHHHHHHHHcCceeeee------cCCeEEEEeccCCCHHH
Q 001579 449 RVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD-AHAIASAAYKIEMNLRVV------DSNTVTASFDETTTLED 519 (1050)
Q Consensus 449 ~~~~~a~~l~~~L~~~G~~~l~~~--~~~~~v~i~~~~-~~~i~~~L~~~GI~~~~~------~~~~lris~~e~~t~ed 519 (1050)
+..++.+++.+.|++.| +.+..+ .++ +.+..+. ..++.+.|.++||.+... .++.+|+++.. ++++
T Consensus 280 ~~~~~~~~l~~~L~~~g-~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~--~~~~ 354 (364)
T PRK07865 280 RYARRRAVLRPALEAAG-FRVDHSEAGLY--LWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA--TDER 354 (364)
T ss_pred HHHHHHHHHHHHHHHcC-CcccCCCccEE--EEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC--CHHH
Confidence 77788889999998887 775432 222 3334443 677888899999987441 24689999975 6899
Q ss_pred HHHHHHHHh
Q 001579 520 VDKLFIVFA 528 (1050)
Q Consensus 520 Id~lv~~l~ 528 (1050)
+++.++.|+
T Consensus 355 ~~~~~~~l~ 363 (364)
T PRK07865 355 IAAAVERLA 363 (364)
T ss_pred HHHHHHHhh
Confidence 999998875
No 500
>PRK07049 methionine gamma-lyase; Validated
Probab=99.39 E-value=3.3e-11 Score=142.25 Aligned_cols=219 Identities=16% Similarity=0.191 Sum_probs=147.5
Q ss_pred HHHHHHHHHhhCCCeeeeccCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEcCCCCCccHHH----HHhCCCEEEEEcCC
Q 001579 635 NNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTD 710 (1050)
Q Consensus 635 ~el~~~lael~G~d~~~l~~~sGa~ge~a~Llair~y~~~~G~~~r~~Vlip~saHgt~pa~----a~~~G~~vv~V~~d 710 (1050)
.++++.++++.|.+.+ +..++|.++..+.+.++. . ++++|+++...++.+... +...|++++.++.
T Consensus 86 ~~Le~~lA~leg~~~~-iv~~sG~~Ai~~~l~al~----~----~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~- 155 (427)
T PRK07049 86 EIVEDRLAVYEGAESA-ALFSSGMSAIATTLLAFV----R----PGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD- 155 (427)
T ss_pred HHHHHHHHHHhCCCcE-EEEccHHHHHHHHHHHHh----C----CCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC-
Confidence 4788999999998754 556778776544433321 2 457899988777665544 3467998777752
Q ss_pred CCCCCCHHHHHHHHHcC--CCCEEEEEEEcC-CCccccccCHHHHHHHHHH------cCCEEEEeccccccccccCCCCc
Q 001579 711 AKGNINIEELRKAAEAN--RDNLSTLMVTYP-STHGVYEEGIDEICKIIHD------NGGQVYMDGANMNAQVGLTSPGY 781 (1050)
Q Consensus 711 ~~g~iD~e~L~~~i~~~--~~~taaV~vt~P-n~~Gv~~~di~eI~~la~~------~G~~v~vD~A~~~al~gl~~pg~ 781 (1050)
+ .|+++|++++++. .+++++|++++| |.+|.+- |+++|.++++. +|+++++|.+.... ....|.+
T Consensus 156 --~-~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~-d~~~l~~la~~~~~~~~~~~~vvvDety~~~--~~~~pl~ 229 (427)
T PRK07049 156 --G-LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLV-DVAAVRRVADAIEARQGHRPIIACDNTLLGP--VFQKPLE 229 (427)
T ss_pred --C-CCHHHHHHHHHhhccCCCceEEEEECCCCCCCccc-CHHHHHHHHHHhhhcccCCCEEEEECCcccc--ccCCccc
Confidence 2 5788888877532 257999999999 5789887 79999999988 89999999874211 1245667
Q ss_pred ccCcEEEeCCccccccCCCCCCCcceeeeecccccCCCCCCccccCCCCCCCCCCCCCC-CCCcchhhhHHHHHHHHHHH
Q 001579 782 IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLG-TIAAAPWGSALILPISYTYI 860 (1050)
Q Consensus 782 ~GaDv~~~~~hKtf~~P~g~GGPg~G~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~-~i~sa~~g~~~~~~~a~a~l 860 (1050)
.|+|+++.++.|+|+ |.+|..+|+++.++++.+.+.. . + ...+ .++ + ..+|..+
T Consensus 230 ~g~divv~S~SK~~g---G~~glr~G~vv~~~~l~~~l~~-~-----------~-~~~g~~ls--~-------~~a~l~~ 284 (427)
T PRK07049 230 HGADLSVYSLTKYVG---GHSDLVAGAVLGRKALIRQVRA-L-----------R-SAIGTQLD--P-------HSCWMLG 284 (427)
T ss_pred cCCCEEEEcCceeec---CCCCcEEEEEECCHHHHHHHHH-H-----------H-HhcCCCCC--H-------HHHHHHH
Confidence 799999999999996 2356789999887766544320 0 0 0011 111 1 1234433
Q ss_pred HHHChhhHHHHHHHHHHHHHHHHHHHhcc---CCeeecC
Q 001579 861 AMMGSKGLTEASKIAILNANYMAKRLEKH---YPILFRG 896 (1050)
Q Consensus 861 ~~lG~eGl~~~a~~~~~~a~yl~~~L~~~---~~v~~~g 896 (1050)
+.+ +-+....++...++..+++.|+++ -.|.|+|
T Consensus 285 r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~ 321 (427)
T PRK07049 285 RSL--ETLVLRMERANRNARAVAEFLRDHPKVEKLHYLP 321 (427)
T ss_pred cCC--ChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 333 446666677788999999999876 3456664
Done!