Query 001579
Match_columns 1050
No_of_seqs 628 out of 5234
Neff 7.1
Searched_HMMs 29240
Date Tue Mar 26 16:39:49 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001579.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_877-881//hhsearch_pdb/001579hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wyu_A Glycine dehydrogenase ( 1.0 1 1 534.8 41.8 420 101-529 2-435 (438)
2 1wyu_B Glycine dehydrogenase s 1.0 1 1 428.6 39.9 425 547-1001 29-459 (474)
3 1wyu_B Glycine dehydrogenase s 1.0 1 1 325.4 36.0 378 124-529 25-436 (474)
4 1wyu_A Glycine dehydrogenase ( 1.0 1 1 320.1 37.7 405 514-969 5-437 (438)
5 3mc6_A Sphingosine-1-phosphate 1.0 1 1 272.7 31.7 382 560-974 37-439 (497)
6 3mad_A Sphingosine-1-phosphate 1.0 1 1 246.2 35.1 383 559-974 69-471 (514)
7 2jis_A Cysteine sulfinic acid 1.0 1 1 242.5 27.2 390 560-971 81-514 (515)
8 3mc6_A Sphingosine-1-phosphate 1.0 1 1 241.2 32.9 388 103-529 3-432 (497)
9 2dgk_A GAD-beta, GADB, glutama 1.0 1 1 240.9 36.5 384 560-974 17-436 (452)
10 3vp6_A Glutamate decarboxylase 1.0 1 1 240.9 28.7 389 560-972 68-505 (511)
No 1
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=1.00 E-value=1 Score=534.82 Aligned_cols=420 Identities=34% Similarity=0.529 Sum_probs=382.7
Q ss_pred CCCCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCCCCCCC
Q ss_conf 6899999999999989099998877520299621-12788988889899999999999998507973-320139999999
Q 001579 101 RHNSATPEDQAKMSELVGLDNLDSLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV-YKSFIGMGYYNT 178 (1050)
Q Consensus 101 ~~~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~-~~~~~G~g~~~~ 178 (1050)
+||||+++|+++||++||++|+||||++ ||+++ ++ +++|| +++||.++++++..++++|.. +.+|+|.|+|++
T Consensus 2 ~~~~~~~~~~~~ml~~~g~~~~~~~~~~-~p~~~~~~-~~~lp---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~ 76 (438)
T 1wyu_A 2 DYTPHTEEEIREMLRRVGAASLEDLFAH-LPKEILSP-PIDLP---EPLPEWKVLEELRRLAAQNLPAHKAFLGGGVRSH 76 (438)
T ss_dssp CCCCCCHHHHHHHHHHHTCSSTGGGGTT-SCGGGSSC-CCCCC---CCCCHHHHHHHHHHHHHTSCCCTTCCCCSSCCCC
T ss_pred CCCCCCHHHHHHHHHHCCCCCHHHHHHH-CCHHHHCC-CCCCC---CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 9899299999999997499988999885-85987458-78989---9989999999999998437676511067776587
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 89099999888289754245988157753699999999999997309998634670436999999999953313999799
Q 001579 179 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLPMSNASLLDEGTAAAEAMAMCNNIQKGKKKTF 258 (1050)
Q Consensus 179 ~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~~anasl~d~~Taa~eA~~la~~~~~~~~~~V 258 (1050)
.+|.++ ++++++++||+.|+|||||++||.++.+.++|+++++++|++.+|+++++|+|+++|++.++.++. ++++|
T Consensus 77 ~~p~~v-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~--~gd~V 153 (438)
T 1wyu_A 77 HVPPVV-QALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRET--GRMGV 153 (438)
T ss_dssp CCCHHH-HHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHH--TCCEE
T ss_pred CCCHHH-HHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCC--CCCEE
T ss_conf 182899-998746312314787760656449999999999999985998325688372789999999997607--99989
Q ss_pred EECCCCCHHHHHHHHHHCCCCCEEEEECCCHH----HHCCCCCEEEEEEECCCCCEEECCHHHHHHHHHHCCCEEEEEEC
Q ss_conf 99299975479999973058983999908133----32128996599998499974571679999999857959999926
Q 001579 259 IIASNCHPQTIDICITRADGFDIKVVVSDLKD----IDYKSGDVCGVLVQYPGTEGEVLDYGDFIKNAHANGVKVVMATD 334 (1050)
Q Consensus 259 ivs~~~Hps~~~~~~~~a~~~gi~v~~~~~~~----l~~l~~~t~~vvv~~pn~~G~i~di~~I~~~ah~~gal~iV~ad 334 (1050)
+++...|+++..+++.+++..|++++.++.++ ++.++++|++|++++||.+|.+.|+++|+++||++|++++|++|
T Consensus 154 iv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~d~~~i~~~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d 233 (438)
T 1wyu_A 154 LVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRTPLPEVGEEVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVAD 233 (438)
T ss_dssp EEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTBCCCCCCCTTEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECC
T ss_pred EECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCEEEEEEECCCCCEEEECHHHHHHHHHHCCCEEEEEEC
T ss_conf 98486587689999999987797899986767866889918873899998799872770299999999985998999864
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCC
Q ss_conf 76635789998544319990685336447889960689997034452199927867332899852177412211111103
Q 001579 335 LLALTILKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRD 414 (1050)
Q Consensus 335 ~~alg~l~~pg~~GaDi~vgs~k~lg~P~~~GGP~~G~l~~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreqhirRe 414 (1050)
..+++.+..++++|+|++++++|+||.|+++|||++||+++++++.+++|++++|.+.|..+.++|.+++|+|+||+||+
T Consensus 234 ~~a~g~~~~~~~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~ 313 (438)
T 1wyu_A 234 PLSLGVLKPPGAYGADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRA 313 (438)
T ss_dssp TTGGGTBCCHHHHTCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGG
T ss_pred HHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEECCCCCCCCCCCEEEECCCCCCCCCHH
T ss_conf 65410758976479988997786467886689987667897699997499863222235688743256326665532011
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEECCC-CCCCEEEEECCC-HHHHHHH
Q ss_conf 46887430468999999999998090209999999999999999997329-97797499-974479995499-9999999
Q 001579 415 KATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKL-GTVEVQGL-PFFDTVKVKCAD-AHAIASA 491 (1050)
Q Consensus 415 kaTsnict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~-G~~~v~~~-~~~~~v~i~~~~-~~~i~~~ 491 (1050)
++|+|+|+++.+.++.+++|+.+++++|++++.++.+++++++.++|+++ | +++... ++|..+.+..+. ..++.++
T Consensus 314 ~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (438)
T 1wyu_A 314 KAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPG-VRPFTPKPFFNEFALALPKDPEAVRRA 392 (438)
T ss_dssp GSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT-CEECSCSSBCSEEEEECSSCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCC-EEECCCCCEEEEEEEECCCCHHHHHHH
T ss_conf 2567734219999999999999968888999999999999999999762898-687789983789999579999999999
Q ss_pred HHHCCCEE--EEE---CCCEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 99869624--210---599299993269999999999999819
Q 001579 492 AYKIEMNL--RVV---DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 492 L~~~Gi~~--~~~---~~~~iris~~e~~t~edId~li~~l~~ 529 (1050)
|.++||.+ +.. .++.+|+|+++++|++|+++++++|+.
T Consensus 393 L~~~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~ 435 (438)
T 1wyu_A 393 LAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKE 435 (438)
T ss_dssp HHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred HHHCCCEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 9978956524566243899699995146899999999999999
No 2
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=1.00 E-value=1 Score=428.55 Aligned_cols=425 Identities=39% Similarity=0.708 Sum_probs=345.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHH
Q ss_conf 39997557899889964577789899999999982164575654324535236765010002445523326799992111
Q 001579 547 AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQ 626 (1050)
Q Consensus 547 ~~p~~~~~~~~~~~~p~~~~~~se~ei~r~l~~l~~~d~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~p~~p~e~ 626 (1050)
.||++++|++++ .+| ++||.++++++.+++++|.+.++++++||+|+++.++.+......+ |.+||||++.+.
T Consensus 29 ~~p~~~~~~~~~-~lp----~~~e~~~~~~~~~l~~~~~~~~~~~~~lg~~~~~~~p~v~~~~~~~--~~~~~~~~~~~~ 101 (474)
T 1wyu_B 29 LIPKEHLREVPP-RLP----EVDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKLHEEAARL--FADLHPYQDPRT 101 (474)
T ss_dssp HSCGGGBCSSCC-CCC----CCCHHHHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHHHHHHHHT--TSSCCTTSCGGG
T ss_pred CCCHHHHCCCCC-CCC----CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH--HHHCCCCCCHHH
T ss_conf 399888406899-999----9899999999999983787866586226203322798999999999--973288995245
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCC-CCCCEEEECCCCCCCCHHHHHHCCCEEE
Q ss_conf 002799999999999986299903120485689999999999999996199-9997999939998864998875798999
Q 001579 627 AQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGD-HHRNVCIIPVSAHGTNPATAAMCGMKIV 705 (1050)
Q Consensus 627 ~~G~~~~~~el~~~lael~G~~~~~l~~~sGa~ge~a~L~airay~~~~G~-~~r~~VLip~saHgt~pa~a~~~G~~Vv 705 (1050)
++|..+++.++++++++++|++...+++++|+++++.++++++.|+..+|+ ++|++||++.++|+++...+.+.|++++
T Consensus 102 ~~g~~~l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv 181 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVR 181 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEE
T ss_conf 86999999999999999978996365181799999999999999998547766899899958747346999998798899
Q ss_pred EECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 99189999989999999988179987999997699751233279999999997198999966652221366898755674
Q 001579 706 SVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGAD 785 (1050)
Q Consensus 706 ~V~~d~~g~iD~e~L~~~i~~~~~~taaIivt~Ps~~Gv~~~~I~eI~~ia~e~G~~v~vDgA~~~al~gl~~pg~~GaD 785 (1050)
.|+++++|.+|+++|+++++ +++++|++++||++|.+.+++++|+++||++|+++|+|+++.....+..+++++|+|
T Consensus 182 ~v~~~~~~~~d~~~L~~~i~---~~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~d 258 (474)
T 1wyu_B 182 EIPSGPEGEVDLEALKRELG---PHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFD 258 (474)
T ss_dssp EECBCTTSSBCHHHHHHHCS---TTEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCS
T ss_pred EECCCCCCCCCHHHHHHHHC---CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCCCC
T ss_conf 94579999809999997627---884699998999873107789999999998499899967404533367786657874
Q ss_pred EEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 998189631356788887854020012433587899864358899--998888888877763034689999999999997
Q 001579 786 VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGI--PAPEKSQPLGTIAAAPWGSALILPISYTYIAMM 863 (1050)
Q Consensus 786 v~~~s~hKtl~~P~g~GGPgvG~i~v~~~l~~~lpg~~vg~~~~~--~~~~~~~~t~~i~sa~~g~~~~l~~a~a~l~~l 863 (1050)
++++|+||+|++|+|+||||+|++++++++++.++++.++..+.. ....++....... +++++...+.++|+++..+
T Consensus 259 i~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~aa~~~l~~~ 337 (474)
T 1wyu_B 259 VVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVR-SFYGNFLALVRAWAYIRTL 337 (474)
T ss_dssp EEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSS-STTSCHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEECCCCEEEECCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHH
T ss_conf 899817315446787899986799972788976898765046872475255766676241-5768599999999999997
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCC-CCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC--
Q ss_conf 75349999999999999999998600-990233788752103898625643459999999999999799034788889--
Q 001579 864 GSKGLTEASKIAILNANYMAKRLEKH-YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSWP-- 940 (1050)
Q Consensus 864 G~eGl~~~~~~~~~~a~yl~~~L~~~-~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~diak~L~d~Gi~~~~~~~p-- 940 (1050)
|.+++++..+....+++|+.++|+++ +++.+. +..++++++++. .+.+..+++++|.++||++++..||
T Consensus 338 g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~---~~~~~~~~~~~~-----~~~~~~~l~~~L~~~Gi~~~~~~~~~~ 409 (474)
T 1wyu_B 338 GLEGLKKAAALAVLNARYLKELLKEKGYRVPYD---GPSMHEFVAQPP-----EGFRALDLAKGLLELGFHPPTVYFPLI 409 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSC---SSCCSCEEEBCS-----TTCCHHHHHHHHHHTTCCCCEESCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC---CCCCEEEEEECC-----CCCCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 788899999999999999999886669575689---970148999747-----998899999999977926222546665
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8997999717889999999999999999999998855987889972236999954335798
Q 001579 941 VPGTLMIEPTESESKEELDRYCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDT 1001 (1050)
Q Consensus 941 v~g~lrI~~t~~~t~eeid~fi~aL~~i~~e~~~~~~~~~~~~~~~~~~ap~~~~~~~~~~ 1001 (1050)
..+.+|++++..++++++|+++++|++++++ +|+.||+|||++.+.+.||
T Consensus 410 ~~~~lRis~~~~~t~e~id~~~~~L~~~~~~-----------~~~~l~~~p~~~~~~~~~~ 459 (474)
T 1wyu_B 410 VKEALMVEPTETEAKETLEAFAEAMGALLKK-----------PKEWLENAPYSTPVRRLDE 459 (474)
T ss_dssp STTCEEECCCTTSCHHHHHHHHHHHHHHHTS-----------CHHHHHTCCCSSSSCSBCH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHH-----------CCHHHHCCCCCCCCCCCCC
T ss_conf 6987999951678999999999999999984-----------9114313998888576434
No 3
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=1.00 E-value=1 Score=325.38 Aligned_cols=378 Identities=18% Similarity=0.195 Sum_probs=296.1
Q ss_pred HHHHCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf 77520299621-12788988889899999999999998507973---320139999999890999998882897542459
Q 001579 124 SLIDATVPKSI-RIDSMKFSKFDEGLTESQMIEHMQKLASMNKV---YKSFIGMGYYNTHVPPVILRNIMENPAWYTQYT 199 (1050)
Q Consensus 124 ~l~~~~ip~~~-~~~~~~lp~~~~~~sE~e~~~~~~~la~~n~~---~~~~~G~g~~~~~~p~~i~~~i~~~~~~~t~yt 199 (1050)
++.+ .||+++ ++.+++|| ++||.++++++++++++|.. ...|+| |+++++.|.++. .+.++ ++.|+
T Consensus 25 ~~~~-~~p~~~~~~~~~~lp----~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~-~~~~~---~~~~~ 94 (474)
T 1wyu_B 25 KAED-LIPKEHLREVPPRLP----EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHE-EAARL---FADLH 94 (474)
T ss_dssp CHHH-HSCGGGBCSSCCCCC----CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHH-HHHHT---TSSCC
T ss_pred HHHH-CCCHHHHCCCCCCCC----CCCHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCHHHHH-HHHHH---HHHCC
T ss_conf 1331-399888406899999----98999999999999837878665862262-033227989999-99999---97328
Q ss_pred CCHHH-HHHHHHHHHHHHHHHHHHHCCCCCCCEEEE-CCHHHHHHHHHHHHH-HHCCCC-----CEEEECCCCCHHHHHH
Q ss_conf 88157-753699999999999997309998634670-436999999999953-313999-----7999929997547999
Q 001579 200 PYQAE-IAQGRLESLLNFQTMIADLTGLPMSNASLL-DEGTAAAEAMAMCNN-IQKGKK-----KTFIIASNCHPQTIDI 271 (1050)
Q Consensus 200 pyq~e-isqG~le~l~e~q~~ia~L~G~~~anasl~-d~~Taa~eA~~la~~-~~~~~~-----~~Vivs~~~Hps~~~~ 271 (1050)
|||++ .+||.++...++++++++++|++. .+++ .++|.+..+.+++.+ +...+| ++|+++...|+++...
T Consensus 95 ~~~~~~~~~g~~~l~~~l~~~la~~~g~~~--~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~ 172 (474)
T 1wyu_B 95 PYQDPRTAQGALRLMWELGEYLKALTGMDA--ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPAT 172 (474)
T ss_dssp TTSCGGGCHHHHHHHHHHHHHHHHHHTCSE--EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHH
T ss_pred CCCCHHHCHHHHHHHHHHHHHHHHHHCCCC--EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHH
T ss_conf 899524586999999999999999978996--365181799999999999999998547766899899958747346999
Q ss_pred HHHHCCCCCEEEEECCC--------HHHHC-CCCCEEEEEEECCCCCEEE-CCHHHHHHHHHHCCCEEEEEECCCCCCC-
Q ss_conf 99730589839999081--------33321-2899659999849997457-1679999999857959999926766357-
Q 001579 272 CITRADGFDIKVVVSDL--------KDIDY-KSGDVCGVLVQYPGTEGEV-LDYGDFIKNAHANGVKVVMATDLLALTI- 340 (1050)
Q Consensus 272 ~~~~a~~~gi~v~~~~~--------~~l~~-l~~~t~~vvv~~pn~~G~i-~di~~I~~~ah~~gal~iV~ad~~alg~- 340 (1050)
++ ..|++++.++. ++|++ +++++++|++++||.+|.+ .|+++|+++||++|++++++. ..+.+.
T Consensus 173 ~~----~~G~~vv~v~~~~~~~~d~~~L~~~i~~~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~De-a~~~~~~ 247 (474)
T 1wyu_B 173 AS----MAGYQVREIPSGPEGEVDLEALKRELGPHVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDG-ANLNAIM 247 (474)
T ss_dssp HH----HTTCEEEEECBCTTSSBCHHHHHHHCSTTEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEG-GGGGGTT
T ss_pred HH----HCCCEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEC-CHHHHHC
T ss_conf 99----879889994579999809999997627884699998999873107789999999998499899967-4045333
Q ss_pred -CCCCCCCCCEEEEECC-CCCCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf -8999854431999068-53364478899606899970344521999278673328998521774122111111034688
Q 001579 341 -LKPPGELGADIVVGSA-QRFGVPMGYGGPHAAFLATSQEYKRMMPGRIVGVSIDSSGKPALRVAMQTREQHIRRDKATS 418 (1050)
Q Consensus 341 -l~~pg~~GaDi~vgs~-k~lg~P~~~GGP~~G~l~~~~~~~r~lpgrivG~s~d~~g~~~~~l~lqtreqhirRekaTs 418 (1050)
..+++++|+|++++|+ |+|+.|+|+|||++|++++++++.++++++++|. + | ..|.+++ +++|||+|.+++.
T Consensus 248 g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~--~--g-~~~~~~~-~~~~~~~~~~~~~ 321 (474)
T 1wyu_B 248 GWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVER--G--E-EGFYLDF-DRPKSIGRVRSFY 321 (474)
T ss_dssp TTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEE--C--S-SCEEEEC-CCTTCCCCSSSTT
T ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEEC--C--C-CEEEECC-CCCCCCCCCCCCC
T ss_conf 6778665787489981731544678789998679997278897689876504--6--8-7247525-5766676241576
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEC-CCCCCCEEEEECC--C-HHHHHHHHHH
Q ss_conf 7430468999999999998090209999999999999999997329977974-9997447999549--9-9999999998
Q 001579 419 NICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKKLGTVEVQ-GLPFFDTVKVKCA--D-AHAIASAAYK 494 (1050)
Q Consensus 419 nict~~~l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~~G~~~v~-~~~~~~~v~i~~~--~-~~~i~~~L~~ 494 (1050)
.+.+....+..++..+|.++++++.++..++++++.+.|+++| +++. +...++.+.+.++ . ..++.++|.+
T Consensus 322 ----~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 396 (474)
T 1wyu_B 322 ----GNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEKG-YRVPYDGPSMHEFVAQPPEGFRALDLAKGLLE 396 (474)
T ss_dssp ----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CBCSSCSSCCSCEEEBCSTTCCHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCCCCCEEEEEECCCCCCHHHHHHHHHH
T ss_conf ----8599999999999997788899999999999999999886669-57568997014899974799889999999997
Q ss_pred CCCEEEEE-----CCCEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 69624210-----599299993269999999999999819
Q 001579 495 IEMNLRVV-----DSNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 495 ~Gi~~~~~-----~~~~iris~~e~~t~edId~li~~l~~ 529 (1050)
+||.+... ..+.+|+++++++|++|||+++++|+.
T Consensus 397 ~Gi~~~~~~~~~~~~~~lRis~~~~~t~e~id~~~~~L~~ 436 (474)
T 1wyu_B 397 LGFHPPTVYFPLIVKEALMVEPTETEAKETLEAFAEAMGA 436 (474)
T ss_dssp TTCCCCEESCSTTSTTCEEECCCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 7926222546665698799995167899999999999999
No 4
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=1.00 E-value=1 Score=320.11 Aligned_cols=405 Identities=20% Similarity=0.311 Sum_probs=301.7
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999998199999877776655532039997557899889964577789899999999982164575654324
Q 001579 514 TTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIP 593 (1050)
Q Consensus 514 ~~t~edId~li~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~se~ei~r~l~~l~~~d~~~~~~~i~ 593 (1050)
-+|++|++..++.++.. ++++|+. +||+++++. ++ .+| .++||.++++++..+++++.. +....
T Consensus 5 ~~~~~~~~~ml~~~g~~-----~~~~~~~----~~p~~~~~~-~~-~lp---~~~~~~~~~~~~~~l~~~~~~--~~~~~ 68 (438)
T 1wyu_A 5 PHTEEEIREMLRRVGAA-----SLEDLFA----HLPKEILSP-PI-DLP---EPLPEWKVLEELRRLAAQNLP--AHKAF 68 (438)
T ss_dssp CCCHHHHHHHHHHHTCS-----STGGGGT----TSCGGGSSC-CC-CCC---CCCCHHHHHHHHHHHHHTSCC--CTTCC
T ss_pred CCCHHHHHHHHHHCCCC-----CHHHHHH----HCCHHHHCC-CC-CCC---CCCCHHHHHHHHHHHHHCCCC--CCCCC
T ss_conf 92999999999974999-----8899988----585987458-78-989---998999999999999843767--65110
Q ss_pred CCC--CCCCCCHHHHHCCCCCCCC-CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCEEE--ECCCCHHHHHHHHHHHH
Q ss_conf 535--2367650100024455233-267999921110027999999999999862999031--20485689999999999
Q 001579 594 LGS--CTMKLNATTEMMPVTWPSF-ANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFS--LQPNAGAAGEYAGLMVI 668 (1050)
Q Consensus 594 lGs--~t~~~~~~~~~~~~~~~~f-~~~~p~~p~e~~~G~~~~~~el~~~lael~G~~~~~--l~~~sGa~ge~a~L~ai 668 (1050)
+|. +....+..+... ...++| ..|+|++| +.++|..+++.++++++++++|++..+ +.+++++ +.+++++++
T Consensus 69 ~~~g~~~~~~p~~v~~~-~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~la~~~g~~~~~i~~~~g~ta-a~ea~~~a~ 145 (438)
T 1wyu_A 69 LGGGVRSHHVPPVVQAL-AARGEFLTAYTPYQP-EVSQGVLQATFEYQTMIAELAGLEIANASMYDGATA-LAEGVLLAL 145 (438)
T ss_dssp CCSSCCCCCCCHHHHHH-HTSHHHHHCCSCCSG-GGCHHHHHHHHHHHHHHHHHHTSSEECSCBSSHHHH-HHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHH-HHCCHHHHCCCCCCC-HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHH-HHHHHHHHH
T ss_conf 67776587182899998-746312314787760-656449999999999999985998325688372789-999999997
Q ss_pred HHHHHHCCCCCCCEEEECCCCCCCCHHH----HHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCC
Q ss_conf 9999961999997999939998864998----875798999991899999899999999881799879999976997512
Q 001579 669 RAYHKARGDHHRNVCIIPVSAHGTNPAT----AAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGV 744 (1050)
Q Consensus 669 ray~~~~G~~~r~~VLip~saHgt~pa~----a~~~G~~Vv~V~~d~~g~iD~e~L~~~i~~~~~~taaIivt~Ps~~Gv 744 (1050)
+. . ++++||++...|.++... +...|++++.++. +++.+|+++ ++ ++|++|++++||++|.
T Consensus 146 ~~---~----~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~~~----i~---~~t~~v~i~~pn~tG~ 210 (438)
T 1wyu_A 146 RE---T----GRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPLPE----VG---EEVGAVVVQNPNFLGA 210 (438)
T ss_dssp HH---H----TCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCCCC----CC---TTEEEEEEESSCTTSB
T ss_pred HC---C----CCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEECC-CCCCCCHHH----HC---CCEEEEEEECCCCCEE
T ss_conf 60---7----99989984865876899999999877978999867-678668899----18---8738999987998727
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 33279999999997198999966652221366898755674998189631356788887854020012433587899864
Q 001579 745 YEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV 824 (1050)
Q Consensus 745 ~~~~I~eI~~ia~e~G~~v~vDgA~~~al~gl~~pg~~GaDv~~~s~hKtl~~P~g~GGPgvG~i~v~~~l~~~lpg~~v 824 (1050)
+. ++++|+++||++|+++++|.. ..+++.+..|+++|+|++++| +|.|++|++++|||+|++++++++.+.+++...
T Consensus 211 ~~-~l~~i~~la~~~g~~vivd~d-~~a~g~~~~~~~~g~D~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~ 287 (438)
T 1wyu_A 211 LE-DLGPFAEAAHGAGALFVAVAD-PLSLGVLKPPGAYGADIAVGD-GQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLV 287 (438)
T ss_dssp CC-CHHHHHHHHHHTTCEEEEECC-TTGGGTBCCHHHHTCSEEEEE-CTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCE
T ss_pred EE-CHHHHHHHHHHCCCEEEEEEC-HHHCCCCCCCCCCCCCEEEEC-CCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEE
T ss_conf 70-299999999985998999864-654107589764799889977-864678866899876678976999974998632
Q ss_pred CCCCCC-C------------CC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC-
Q ss_conf 358899-9------------98-88888887776303468999999999999775349999999999999999998600-
Q 001579 825 VSTGGI-P------------AP-EKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH- 889 (1050)
Q Consensus 825 g~~~~~-~------------~~-~~~~~t~~i~sa~~g~~~~l~~a~a~l~~lG~eGl~~~~~~~~~~a~yl~~~L~~~- 889 (1050)
+.+.+. . .+ .+++++.++++. +......+++++..++++|+++..++...+++++.++|+++
T Consensus 288 g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~---~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~ 364 (438)
T 1wyu_A 288 SETVDVEGRRGFILTLQAREQYIRRAKAKSNITTN---AQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVP 364 (438)
T ss_dssp EEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred CCCCCCCCCCCEEEECCCCCCCCCHHCCCCCCCCH---HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 22235688743256326665532011256773421---999999999999996888899999999999999999976289
Q ss_pred -CCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCC--C-CCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf -990233788752103898625643459999999999999799034--7-888898997999717889999999999999
Q 001579 890 -YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHG--P-TMSWPVPGTLMIEPTESESKEELDRYCDAL 965 (1050)
Q Consensus 890 -~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~diak~L~d~Gi~~--~-~~~~pv~g~lrI~~t~~~t~eeid~fi~aL 965 (1050)
+++. ++ .++++.+.+... .+..++.++|.++||.+ . +..++ .+.+|+++++.++++|+|+++++|
T Consensus 365 g~~~~--~~-~~~~~~~~~~~~-------~~~~~~~~~L~~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l 433 (438)
T 1wyu_A 365 GVRPF--TP-KPFFNEFALALP-------KDPEAVRRALAERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREAL 433 (438)
T ss_dssp TCEEC--SC-SSBCSEEEEECS-------SCHHHHHHHHHHTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHH
T ss_pred CEEEC--CC-CCEEEEEEEECC-------CCHHHHHHHHHHCCCEECCCCCCCCC-CCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 86877--89-983789999579-------99999999999789565245662438-996999951468999999999999
Q ss_pred HHHH
Q ss_conf 9999
Q 001579 966 ISIR 969 (1050)
Q Consensus 966 ~~i~ 969 (1050)
++++
T Consensus 434 ~~~l 437 (438)
T 1wyu_A 434 KEVL 437 (438)
T ss_dssp HHHC
T ss_pred HHHH
T ss_conf 9985
No 5
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=272.73 Aligned_cols=382 Identities=16% Similarity=0.174 Sum_probs=271.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCC--CCCCCCCCCCCCC-CCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHH
Q ss_conf 996457778989999999998216--4575654324535-2367650100024455233267999921110027999999
Q 001579 560 THPVFNKYHTEHELLRYIHLLQSK--ELSLCHSMIPLGS-CTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1050)
Q Consensus 560 ~~p~~~~~~se~ei~r~l~~l~~~--d~~~~~~~i~lGs-~t~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~e 636 (1050)
.+| +.++++.+++++++++... +..+.++.+ +|. +... +...+.+...+..|.+.+++++ +.++|..++..+
T Consensus 37 ~lp--~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~-~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~ 111 (497)
T 3mc6_A 37 QLP--SNGIPQDDVIEELNKLNDLIPHTQWKEGKV-SGAVYHGG-DDLIHLQTIAYEKYCVANQLHP-DVFPAVRKMESE 111 (497)
T ss_dssp SCC--SSCCCHHHHHHHHHHHHHSSCCCCGGGTCB-SSSCSCCC-HHHHHHHHHHHHHTSSCBTTCT-TTCHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCE-EEECCCCC-HHHHHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHH
T ss_conf 789--899899999999999865038988899988-44637893-6799999999997753278882-207579999999
Q ss_pred HHHHHHHHHCCC--E-EEECCCCHHHHHHHHHHHHHHHHHH-CCCCCCCEEEECCCCCCCCHHHHHHCCCEEEEECCCC-
Q ss_conf 999999862999--0-3120485689999999999999996-1999997999939998864998875798999991899-
Q 001579 637 LGEWLCTITGFD--S-FSLQPNAGAAGEYAGLMVIRAYHKA-RGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA- 711 (1050)
Q Consensus 637 l~~~lael~G~~--~-~~l~~~sGa~ge~a~L~airay~~~-~G~~~r~~VLip~saHgt~pa~a~~~G~~Vv~V~~d~- 711 (1050)
+++++++++|++ . ..+++++|+++...++++++.+... +|. ++++|+++...|.++...+...|++++.|++++
T Consensus 112 ~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~-~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~ 190 (497)
T 3mc6_A 112 VVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGI-TEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPT 190 (497)
T ss_dssp HHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCC-SSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTT
T ss_pred HHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCC-CCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCC
T ss_conf 999999984899889849983737899999999999888753899-7764999577407899999985982799951764
Q ss_pred CCCCCHHHHHHHHHCCCCCEEEEEEECCC-CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCC---------C--CCC
Q ss_conf 99989999999988179987999997699-75123327999999999719899996665222136---------6--898
Q 001579 712 KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVG---------L--TSP 779 (1050)
Q Consensus 712 ~g~iD~e~L~~~i~~~~~~taaIivt~Ps-~~Gv~~~~I~eI~~ia~e~G~~v~vDgA~~~al~g---------l--~~p 779 (1050)
++.+|+++|+++++ +++++|++++|+ .+|.++ ++++|+++|+++|+++++|+|+...... + ...
T Consensus 191 ~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~-~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~ 266 (497)
T 3mc6_A 191 TYQVDLGKVKKFIN---KNTVLLVGSAPNFPHGIAD-DIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDF 266 (497)
T ss_dssp TCSBCTTTTGGGCC---SSEEEEEEETTCTTTCCCC-SCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCST
T ss_pred CCCCCHHHHHHHHH---HCCEEEEEECCCCCCCCCC-CHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCCC
T ss_conf 58699999999870---4887999978998887577-8999999999839979997764456666444305667763335
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 75567499818963135678888785402001243358789986435889999888888887776303468999999999
Q 001579 780 GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1050)
Q Consensus 780 g~~GaDv~~~s~hKtl~~P~g~GGPgvG~i~v~~~l~~~lpg~~vg~~~~~~~~~~~~~t~~i~sa~~g~~~~l~~a~a~ 859 (1050)
...|+|+++.++||++. |++++|+++++++......... .. . ..+.......+.++. .....++.|++
T Consensus 267 ~~~g~d~~~~s~~K~l~-----~~~~~g~~~~~~~~~~~~~~~~-~~-~---~~~~~~~~~~~~g~~--~~~~~~a~~aa 334 (497)
T 3mc6_A 267 RVPGVTSISCDTHKYGF-----APKGSSVIMYRNSDLRMHQYYV-NP-A---WTGGLYGSPTLAGSR--PGAIVVGCWAT 334 (497)
T ss_dssp TSTTCCEEEEETTTTTC-----CCSSCEEEECSSHHHHTTTSCC-BT-T---CTTSCBCCSSSCSSC--BHHHHHHHHHH
T ss_pred CCCCCCEEEECCHHHCC-----CCCCCEEEEECCHHHHHHHHCC-CC-C---CCCCCCCCCCCCCCC--CCHHHHHHHHH
T ss_conf 67897189989524157-----7888315886378887530102-66-6---557776786756377--64269999999
Q ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 99977534999999999999999999860-09902337887521038986256434599999999999997990347888
Q 001579 860 IAMMGSKGLTEASKIAILNANYMAKRLEK-HYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMS 938 (1050)
Q Consensus 860 l~~lG~eGl~~~~~~~~~~a~yl~~~L~~-~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~diak~L~d~Gi~~~~~~ 938 (1050)
+..++.+|+.+..++...+++++.++|++ +..+...++ +....+.|... +.+..++.++|.++||.+....
T Consensus 335 l~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~--~~~~~v~~~~~------~~~~~~l~~~L~~~Gi~v~~~~ 406 (497)
T 3mc6_A 335 MVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGN--PRYSVISFSSK------TLNIHELSDRLSKKGWHFNALQ 406 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSC--CCSSEEEEECT------TTTHHHHHHHHHTTTCBCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC--CCEEEEEEECC------CCCHHHHHHHHHHCCEEEECCC
T ss_conf 999828789999999999999999999850999899668--87148999679------9899999999996897986678
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 898997999717889999999999999999999998
Q 001579 939 WPVPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 939 ~pv~g~lrI~~t~~~t~eeid~fi~aL~~i~~e~~~ 974 (1050)
+ +..+|++++ ..+++++|+++++|+++++++..
T Consensus 407 ~--~~~~ri~~~-~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 407 K--PVALHMAFT-RLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp S--SCCEEEECC-TTTTCTHHHHHHHHHHHHHHHTC
T ss_pred C--CCEEEEEEE-CCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9--976899985-89999999999999999999983
No 6
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=1.00 E-value=1 Score=246.20 Aligned_cols=383 Identities=16% Similarity=0.166 Sum_probs=261.4
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHH
Q ss_conf 89964577789899999999982164-57565432453523676501000244552332679999211100279999999
Q 001579 559 LTHPVFNKYHTEHELLRYIHLLQSKE-LSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNL 637 (1050)
Q Consensus 559 ~~~p~~~~~~se~ei~r~l~~l~~~d-~~~~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el 637 (1050)
..+| ..+.++.++++.++++...+ ..+. +..++|+.....+.....+...+..+.+.+++.+ ..+++..++..++
T Consensus 69 ~~lp--~~g~~~~~i~~~l~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~le~~l 144 (514)
T 3mad_A 69 ARLP--RAGLPRAEILAEIAAMGAAESPAWR-DGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHP-DLWPSTAKFEAEV 144 (514)
T ss_dssp SSCC--SSCCCHHHHHHHHHHHHHHHHHHHH-TTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCT-TTCHHHHHHHHHH
T ss_pred CCCC--CCCCCHHHHHHHHHHHHHCCCCCCC-CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHH
T ss_conf 7889--8899999999999998744688888-9846888518997799999999999852577654-4685899999999
Q ss_pred HHHHHHHHCCC---EEE--ECCCCHHHHHHHHHHHHHHHHH-HCCCCCCCEEEECCCCCCCCHHHHHHCCCEEEEECCCC
Q ss_conf 99999862999---031--2048568999999999999999-61999997999939998864998875798999991899
Q 001579 638 GEWLCTITGFD---SFS--LQPNAGAAGEYAGLMVIRAYHK-ARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDA 711 (1050)
Q Consensus 638 ~~~lael~G~~---~~~--l~~~sGa~ge~a~L~airay~~-~~G~~~r~~VLip~saHgt~pa~a~~~G~~Vv~V~~d~ 711 (1050)
++++++++|.+ ... +..++|+++...++.+++.+.. .+|. ++++|+++...|..+...+...|++++.|++++
T Consensus 145 ~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~-~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~ 223 (514)
T 3mad_A 145 VAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGI-TAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDA 223 (514)
T ss_dssp HHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCC-SSCEEEEETTSCTHHHHHHHHHTCEEEEECBCT
T ss_pred HHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCHHHHHHHHHCCCEEEEEEECC
T ss_conf 9999997297976677646985857999999999999876653699-877699967502478999997597469961089
Q ss_pred CCCCCHHHHHHHHHCCCCCEEEEEEECCC-CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC------CC----CCCC
Q ss_conf 99989999999988179987999997699-7512332799999999971989999666522213------66----8987
Q 001579 712 KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQV------GL----TSPG 780 (1050)
Q Consensus 712 ~g~iD~e~L~~~i~~~~~~taaIivt~Ps-~~Gv~~~~I~eI~~ia~e~G~~v~vDgA~~~al~------gl----~~pg 780 (1050)
++.+|+++|+++++ +++++|++++|+ .+|.++ ++++|+++|+++|+++++|+|+..... |. ....
T Consensus 224 ~~~~d~~~Le~~i~---~~~~~v~~~~~~nptG~~~-~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~ 299 (514)
T 3mad_A 224 DYRADVAAMREAIT---PNTVVVAGSAPGYPHGVVD-PIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFR 299 (514)
T ss_dssp TSCBCHHHHHHHCC---TTEEEEEEETTCTTTCCCC-CHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTT
T ss_pred CCCCCHHHHHHHHC---CCCEEEEEECCCCCCCCCC-CHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHCCCCCCCCCCC
T ss_conf 98798999999865---1988999807888885646-8999999999819959996332332100377618888764345
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 55674998189631356788887854020012433587899864-35889999888888887776303468999999999
Q 001579 781 YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPV-VSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTY 859 (1050)
Q Consensus 781 ~~GaDv~~~s~hKtl~~P~g~GGPgvG~i~v~~~l~~~lpg~~v-g~~~~~~~~~~~~~t~~i~sa~~g~~~~l~~a~a~ 859 (1050)
..|+|++++++||++. |+.++|+++++++.......... .+.. .........++.. .......|+.
T Consensus 300 ~~g~d~~~~s~~K~l~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~gs~~--~~~~~a~~aa 366 (514)
T 3mad_A 300 LEGVTSVSADTHKYGY-----GAKGTSVILYRRPDLLHYQYFIAADWPG------GLYFSPTFAGSRP--GALSATAWAA 366 (514)
T ss_dssp STTCCEEEECTTTTTC-----CCSSCEEEEESSHHHHTTTCEEESSCTT------CSEEESSSCSSCC--HHHHHHHHHH
T ss_pred CCCCCEEEECCHHCCC-----CCCCEEEEEEECHHHHCCCCCCCCCCCC------CCCCCCCCCCCCC--HHHHHHHHHH
T ss_conf 7898689989100368-----8998279999477883013344656677------7666875577874--4789999999
Q ss_pred HHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99977534999999999999999999860099023378875210389862564345999999999999979903478888
Q 001579 860 IAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPTMSW 939 (1050)
Q Consensus 860 l~~lG~eGl~~~~~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~diak~L~d~Gi~~~~~~~ 939 (1050)
+..++.+++.+..++...+++++.++|+++..+...++. . ..+.+... +.+..++.++|.++||.++...+
T Consensus 367 l~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~-~~~~~~~~------~~~~~~l~~~L~~~Gi~v~g~~~ 437 (514)
T 3mad_A 367 MLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDP--L-WVIAVASD------ELNIYQVMEEMAGRGWRLNGLHR 437 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCC--S-SEEEEECS------SSCHHHHHHHHHTTTCBCEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC--E-EEEEEECC------CCCHHHHHHHHHHCCCEECCCCC
T ss_conf 999748789999999999999999998508995995797--6-99998189------99999999999966978525778
Q ss_pred CCCCEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 989979997178-89999999999999999999998
Q 001579 940 PVPGTLMIEPTE-SESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 940 pv~g~lrI~~t~-~~t~eeid~fi~aL~~i~~e~~~ 974 (1050)
++.+|++++. .++++++|+++++|+++++++.+
T Consensus 438 --~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 438 --PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp --TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf --9869999715879999999999999999999983
No 7
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=1.00 E-value=1 Score=242.50 Aligned_cols=390 Identities=12% Similarity=0.063 Sum_probs=249.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH-H--HHCCCCCCCCCCCCCCCCHHHCCCHHHHHHH
Q ss_conf 996457778989999999998216457565432453523676501-0--0024455233267999921110027999999
Q 001579 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNAT-T--EMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1050)
Q Consensus 560 ~~p~~~~~~se~ei~r~l~~l~~~d~~~~~~~i~lGs~t~~~~~~-~--~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~e 636 (1050)
.+| ..+.++.++++.++++...+.... ...++++......+. + +++ . .+.+.+.++. +.+++..+++.+
T Consensus 81 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~l-~---~~~n~~~~~~-~~s~~~~~le~~ 152 (515)
T 2jis_A 81 ELR--SQGESQKQILERCRAVIRYSVKTG-HPRFFNQLFSGLDPHALAGRII-T---ESLNTSQYTY-EIAPVFVLMEEE 152 (515)
T ss_dssp CCC--SSCCCHHHHHHHHHHHHHHSCCTT-STTEESSSCCCCCHHHHHHHHH-H---HHHCCCTTCT-TTCHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHCCCCCCC-CCCEEEEEECCCCHHHHHHHHH-H---HHHCCCCCCH-HHCHHHHHHHHH
T ss_conf 789--899999999999999961899899-9994777227998899999999-9---9865577864-446678999999
Q ss_pred HHHHHHHHHCCCEE-EECCCCHHHHHHHHHHHHHHHH----HHCCC--CCCCEEEECCCCCCCCHHHHHHCCC---EEEE
Q ss_conf 99999986299903-1204856899999999999999----96199--9997999939998864998875798---9999
Q 001579 637 LGEWLCTITGFDSF-SLQPNAGAAGEYAGLMVIRAYH----KARGD--HHRNVCIIPVSAHGTNPATAAMCGM---KIVS 706 (1050)
Q Consensus 637 l~~~lael~G~~~~-~l~~~sGa~ge~a~L~airay~----~~~G~--~~r~~VLip~saHgt~pa~a~~~G~---~Vv~ 706 (1050)
+++|+++++|++.. .++.++|+++++.++.++|.+. ..+|. .++.+|+++...|.++...+...|+ +++.
T Consensus 153 ~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~ 232 (515)
T 2jis_A 153 VLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRV 232 (515)
T ss_dssp HHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEE
T ss_pred HHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEE
T ss_conf 99999998489998869858828999999999999875577642766667869997887618999999975999883899
Q ss_pred ECCCCCCCCCHHHHHHHHHCC---CCCEEEEEEECC-CCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCC-----
Q ss_conf 918999998999999998817---998799999769-97512332799999999971989999666522213668-----
Q 001579 707 VGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYP-STHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLT----- 777 (1050)
Q Consensus 707 V~~d~~g~iD~e~L~~~i~~~---~~~taaIivt~P-s~~Gv~~~~I~eI~~ia~e~G~~v~vDgA~~~al~gl~----- 777 (1050)
|++++++.+|+++|++++++. +.++++|++++| |.+|.++ ++++|+++|+++|+++|+|+|+..+.....
T Consensus 233 v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~-~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~ 311 (515)
T 2jis_A 233 VKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD-PLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHL 311 (515)
T ss_dssp ECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC-CHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGG
T ss_pred EECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CHHHHHHHHHHCCCEEEEEHHHHHHHHHCHHHHHH
T ss_conf 86499986989999999999996899747999968999987856-79999999998399699855325688859423865
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCC--CCCC----CCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHH
Q ss_conf 9875567499818963135678888785402001243--3587----8998643588999988888888777-6303468
Q 001579 778 SPGYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPF----LPSHPVVSTGGIPAPEKSQPLGTIA-AAPWGSA 850 (1050)
Q Consensus 778 ~pg~~GaDv~~~s~hKtl~~P~g~GGPgvG~i~v~~~--l~~~----lpg~~vg~~~~~~~~~~~~~t~~i~-sa~~g~~ 850 (1050)
..+..++|++++++||+|+.| .|+|++++++. +... .+....+...+. .......+..+. +..++
T Consensus 312 ~~g~~~aD~v~~s~hK~l~~p-----~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~-~~~~~~~~~~~~~~rr~~-- 383 (515)
T 2jis_A 312 LDGIQRADSVAWNPHKLLAAG-----LQCSALLLQDTSNLLKRCHGSQASYLFQQDKFY-DVALDTGDKVVQCGRRVD-- 383 (515)
T ss_dssp GTTGGGCSEEEECTTSTTCCC-----SCCEEEEESCCSCHHHHHHCC---------CCS-CGGGCCGGGCSCSSCCCC--
T ss_pred CCCCCCCCEEEECCCCCCCCC-----CCEEEEEEECHHHHHHHHHCCCCHHCCCCCCCC-CCCCCCCCCCCCCCCCCC--
T ss_conf 379865898998750025998-----773678884738899987448960016776565-665787888888888520--
Q ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCCCCCC----CCH------
Q ss_conf 9999999999997753499999999999999999986009902337887521038986256434599----999------
Q 001579 851 LILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAG----IEP------ 920 (1050)
Q Consensus 851 ~~l~~a~a~l~~lG~eGl~~~~~~~~~~a~yl~~~L~~~~~v~~~g~~g~~~~e~iv~~~~~~~~~g----~~~------ 920 (1050)
....|+.++.+|.+|+.+..++...+++++.++|+++..+...++ +....++|...+-.. .+ ...
T Consensus 384 --al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~--~~~~~v~f~~~p~~~-~~~~~~~~~~~~l~~ 458 (515)
T 2jis_A 384 --CLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVME--PEFVNVCFWFVPPSL-RGKQESPDYHERLSK 458 (515)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSC--CSSSEEEEEECCGGG-TTCTTSTTHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC--CCEEEEEEEEECCCC-CCCCCCHHHHHHHHH
T ss_conf --999999999984999999999999999999999733899799679--870599999857543-443343467999999
Q ss_pred --HHHHHHHHHCCCCCCCC-CCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf --99999999799034788-889-899799971-7889999999999999999999
Q 001579 921 --EDVAKRLMDYGFHGPTM-SWP-VPGTLMIEP-TESESKEELDRYCDALISIREE 971 (1050)
Q Consensus 921 --~diak~L~d~Gi~~~~~-~~p-v~g~lrI~~-t~~~t~eeid~fi~aL~~i~~e 971 (1050)
..+.++|.+.|+..... .++ ..+.+|+++ ++.++++|+|+++++|+++.++
T Consensus 459 ~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 459 VAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp HHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999996597999977988963899999289999999999999999999954
No 8
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=241.15 Aligned_cols=388 Identities=13% Similarity=0.171 Sum_probs=277.3
Q ss_pred CCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC--CCCCC--CCCCCCCCCC
Q ss_conf 9999999999998909999887752029962112788988889899999999999998507--97332--0139999999
Q 001579 103 NSATPEDQAKMSELVGLDNLDSLIDATVPKSIRIDSMKFSKFDEGLTESQMIEHMQKLASM--NKVYK--SFIGMGYYNT 178 (1050)
Q Consensus 103 ~~~~~~~~~~ml~~~g~~~~~~l~~~~ip~~~~~~~~~lp~~~~~~sE~e~~~~~~~la~~--n~~~~--~~~G~g~~~~ 178 (1050)
||++++++++||+.++.+..++|+.. +|... ....|| ++++++.+++++++++... +..+. +|.|..+++.
T Consensus 3 ~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~lp--~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~ 77 (497)
T 3mc6_A 3 SPFLRGTVEKEVTKVKQSIEDELIRS-DSQLM--NFPQLP--SNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGG 77 (497)
T ss_dssp -----------------------------CCC--CCSSCC--SSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCC--CCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCC
T ss_conf 98367899999999999998742577-66620--026789--89989999999999986503898889998844637893
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCEEEECCHHHHHHHHHHHHHH-H---C
Q ss_conf 8909999988828975424598815775369999999999999730999--86346704369999999999533-1---3
Q 001579 179 HVPPVILRNIMENPAWYTQYTPYQAEIAQGRLESLLNFQTMIADLTGLP--MSNASLLDEGTAAAEAMAMCNNI-Q---K 252 (1050)
Q Consensus 179 ~~p~~i~~~i~~~~~~~t~ytpyq~eisqG~le~l~e~q~~ia~L~G~~--~anasl~d~~Taa~eA~~la~~~-~---~ 252 (1050)
|.+. +.+.+....+..+++++++.++|..+...++++++++++|++ ..++.+++|+|.+...++.+.+. . +
T Consensus 78 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 78 --DDLI-HLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp --HHHH-HHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred --HHHH-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC
T ss_conf --6799-9999999977532788822075799999999999999848998898499837378999999999998887538
Q ss_pred C-CCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCC---------HHHHC-CCCCEEEEEEECCC-CCEEECCHHHHHH
Q ss_conf 9-99799992999754799999730589839999081---------33321-28996599998499-9745716799999
Q 001579 253 G-KKKTFIIASNCHPQTIDICITRADGFDIKVVVSDL---------KDIDY-KSGDVCGVLVQYPG-TEGEVLDYGDFIK 320 (1050)
Q Consensus 253 ~-~~~~Vivs~~~Hps~~~~~~~~a~~~gi~v~~~~~---------~~l~~-l~~~t~~vvv~~pn-~~G~i~di~~I~~ 320 (1050)
+ ++++|+++...|+++...++. .|++++.++. ++|++ +++++++|++++|+ .+|.+.|+++|++
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~----~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~ 230 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYY----FGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGK 230 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHH----SCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTT
T ss_pred CCCCCEEEEECCCCHHHHHHHHH----CCCEEEEEECCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHH
T ss_conf 99776499957740789999998----59827999517645869999999987048879999789988875778999999
Q ss_pred HHHHCCCEEEEEECCCCC-----------CCC--CCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCE
Q ss_conf 998579599999267663-----------578--9998544319990685336447889960689997034452199927
Q 001579 321 NAHANGVKVVMATDLLAL-----------TIL--KPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRI 387 (1050)
Q Consensus 321 ~ah~~gal~iV~ad~~al-----------g~l--~~pg~~GaDi~vgs~k~lg~P~~~GGP~~G~l~~~~~~~r~lpgri 387 (1050)
+||++|++++|+. .++. +.+ .....+|+|++++++++++ +||++.|+++++++..+.....+
T Consensus 231 la~~~g~~livD~-a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l----~~~~~~g~~~~~~~~~~~~~~~~ 305 (497)
T 3mc6_A 231 IAQKYKLPLHVDS-CLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYG----FAPKGSSVIMYRNSDLRMHQYYV 305 (497)
T ss_dssp HHHHTTCCEEEET-TTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTT----CCCSSCEEEECSSHHHHTTTSCC
T ss_pred HHHHHCCEEEEEC-CCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHC----CCCCCCEEEEECCHHHHHHHHCC
T ss_conf 9998399799977-644566664443056677633356789718998952415----77888315886378887530102
Q ss_pred EEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCC-HHH--HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf 86733289985217741221111110346887430-468--99999999999809020999999999999999999732-
Q 001579 388 VGVSIDSSGKPALRVAMQTREQHIRRDKATSNICT-AQA--LLANMAAMYAVYHGPEGLKTIAQRVHGLAGTFALGLKK- 463 (1050)
Q Consensus 388 vG~s~d~~g~~~~~l~lqtreqhirRekaTsnict-~~~--l~a~~aa~y~~~~g~~Gl~~ia~~~~~~a~~L~~~L~~- 463 (1050)
. .+..+.. .++.+++. ... ..+..++ +..++.+|++++.+++.++++++++.|++
T Consensus 306 ~---~~~~~~~----------------~~~~~~~g~~~~~~~~a~~aa--l~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 364 (497)
T 3mc6_A 306 N---PAWTGGL----------------YGSPTLAGSRPGAIVVGCWAT--MVNMGENGYIESCQEIVGAAMKFKKYIQEN 364 (497)
T ss_dssp B---TTCTTSC----------------BCCSSSCSSCBHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred C---CCCCCCC----------------CCCCCCCCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 6---6655777----------------678675637764269999999--999828789999999999999999999850
Q ss_pred CCCEEECCCCCCCEEEEECCC--HHHHHHHHHHCCCEEEEEC-CCEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 997797499974479995499--9999999998696242105-99299993269999999999999819
Q 001579 464 LGTVEVQGLPFFDTVKVKCAD--AHAIASAAYKIEMNLRVVD-SNTVTASFDETTTLEDVDKLFIVFAG 529 (1050)
Q Consensus 464 ~G~~~v~~~~~~~~v~i~~~~--~~~i~~~L~~~Gi~~~~~~-~~~iris~~e~~t~edId~li~~l~~ 529 (1050)
+.+++++..+....+.+..++ ..++.+.|.++||.++... +..+|++++ .+|++|+|+++++|+.
T Consensus 365 ~~g~~~~~~~~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~-~~t~e~i~~~~~~L~~ 432 (497)
T 3mc6_A 365 IPDLDIMGNPRYSVISFSSKTLNIHELSDRLSKKGWHFNALQKPVALHMAFT-RLSAHVVDEICDILRT 432 (497)
T ss_dssp CTTCEECSCCCSSEEEEECTTTTHHHHHHHHHTTTCBCEECCSSCCEEEECC-TTTTCTHHHHHHHHHH
T ss_pred CCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCEEEECCCCCCEEEEEEE-CCCHHHHHHHHHHHHH
T ss_conf 9998996688714899967998999999999968979866789976899985-8999999999999999
No 9
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=1.00 E-value=1 Score=240.92 Aligned_cols=384 Identities=11% Similarity=0.016 Sum_probs=255.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHH
Q ss_conf 9964577789899999999982164575-654324535236765010002445523326799992111002799999999
Q 001579 560 THPVFNKYHTEHELLRYIHLLQSKELSL-CHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLG 638 (1050)
Q Consensus 560 ~~p~~~~~~se~ei~r~l~~l~~~d~~~-~~~~i~lGs~t~~~~~~~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~el~ 638 (1050)
.+| ..+.++.++++.+.++...+... .....+++ +...+...+.+...+ +-+++++ +.+++..+++.+++
T Consensus 17 ~lp--~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~--~~~~~~v~e~~~~a~----~~~~~~~-~~~~~~~~l~~~~~ 87 (452)
T 2dgk_A 17 RFP--LHEMRDDVAFQIINDELYLDGNARQNLATFCQ--TWDDENVHKLMDLSI----NKNWIDK-EEYPQSAAIDLRCV 87 (452)
T ss_dssp SCC--CSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSC--CCCCHHHHHHHHHTT----TCBTTCT-TTCHHHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEC--CCCHHHHHHHHHHHH----CCCCCCH-HHCHHHHHHHHHHH
T ss_conf 878--89999999999999985578987667897067--776499999999986----1578973-33765999999999
Q ss_pred HHHHHHHCCCEE------EECCCCHHHHHHHHHHHHHHHHH----HCCCC-CCCEEEECCCCCCCCHHHHHHCCCEEEEE
Q ss_conf 999986299903------12048568999999999999999----61999-99799993999886499887579899999
Q 001579 639 EWLCTITGFDSF------SLQPNAGAAGEYAGLMVIRAYHK----ARGDH-HRNVCIIPVSAHGTNPATAAMCGMKIVSV 707 (1050)
Q Consensus 639 ~~lael~G~~~~------~l~~~sGa~ge~a~L~airay~~----~~G~~-~r~~VLip~saHgt~pa~a~~~G~~Vv~V 707 (1050)
+++++++|++.. .+..++|++++..++++++.... .+|.. .+++||++. .|.++...+.+.|++++.|
T Consensus 88 ~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v 166 (452)
T 2dgk_A 88 NMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREI 166 (452)
T ss_dssp HHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC-CCHHHHHHHHHCCCEEEEE
T ss_conf 999998489933356886499387899999999999999987887548887782799888-7399999998769457997
Q ss_pred CCCC-CCCCCHHHHHHHHHCCCCCEEEEEEECCC-CCCCCCCCHHHHHHHHHHC------CCEEEEECCCCCCCCCC-CC
Q ss_conf 1899-99989999999988179987999997699-7512332799999999971------98999966652221366-89
Q 001579 708 GTDA-KGNINIEELRKAAEANRDNLSTLMVTYPS-THGVYEEGIDEICKIIHDN------GGQVYMDGANMNAQVGL-TS 778 (1050)
Q Consensus 708 ~~d~-~g~iD~e~L~~~i~~~~~~taaIivt~Ps-~~Gv~~~~I~eI~~ia~e~------G~~v~vDgA~~~al~gl-~~ 778 (1050)
++++ ++.+|+++|+++++ ++|++|++++|+ .+|.++ |+++|+++|+++ |+++|||+|+......+ ..
T Consensus 167 ~~~~~~~~~d~~~l~~~i~---~~t~~v~~~~~~n~tG~~~-~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 242 (452)
T 2dgk_A 167 PMRPGQLFMDPKRMIEACD---ENTIGVVPTFGVTYTGNYE-FPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAP 242 (452)
T ss_dssp CCBTTBCSCCHHHHHHHCC---TTEEEEECBBSCTTTCBBC-CHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCT
T ss_pred ECCCCCCEECHHHHHHHHH---HCCEEEEEECCCCCCCCCC-CHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCC
T ss_conf 4288887397999999986---6888999975886882307-99999999999865107897279974517778774085
Q ss_pred --CC---CCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCC-CC-CCCCC--CCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf --87---5567499818963135678888785402001243-35-87899--8643588999988888888777630346
Q 001579 779 --PG---YIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LA-PFLPS--HPVVSTGGIPAPEKSQPLGTIAAAPWGS 849 (1050)
Q Consensus 779 --pg---~~GaDv~~~s~hKtl~~P~g~GGPgvG~i~v~~~-l~-~~lpg--~~vg~~~~~~~~~~~~~t~~i~sa~~g~ 849 (1050)
+. ..++|++++++||++ ++++++|++++++. +. ..+.. ...+... ......... .+
T Consensus 243 ~~~~~~~~~~~d~~~~~~hK~~-----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~r---~~- 307 (452)
T 2dgk_A 243 DIVWDFRLPRVKSISASGHKFG-----LAPLGCGWVIWRDEEALPQELVFNVDYLGGQI------GTFAINFSR---PA- 307 (452)
T ss_dssp TCCCSTTSTTEEEEEEETTTTT-----CCCSSCEEEEESSGGGSCGGGCEEECCTTCCE------EECCSCCSC---BC-
T ss_pred CCHHHCCCCCCCEEEECCCCCC-----CCCCCEEEEEECCHHHHHHHHCCCCCCCCCCC------CCCCCCCCC---HH-
T ss_conf 4242227888737987763356-----89888689998599997887446865348998------875607897---24-
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH
Q ss_conf 8999999999999775349999999999999999998600--99023378875210389862564345999999999999
Q 001579 850 ALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRL 927 (1050)
Q Consensus 850 ~~~l~~a~a~l~~lG~eGl~~~~~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~~g~~~~diak~L 927 (1050)
..+...|+.+..+|.+|+.+..++...+++++.++|+++ +++..++...+..+.+.|.+.+.. ....+..++.++|
T Consensus 308 -~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~~~~l~~~L 385 (452)
T 2dgk_A 308 -GQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE-DPGYTLYDLSERL 385 (452)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTC-CCSCCHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEECCCC-CCCCCHHHHHHHH
T ss_conf -89999999999973999999999999999999999974899699437888887689999955864-3447999999999
Q ss_pred HHCCCCCCCCCCC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9799034788889----8997999717889999999999999999999998
Q 001579 928 MDYGFHGPTMSWP----VPGTLMIEPTESESKEELDRYCDALISIREEIAQ 974 (1050)
Q Consensus 928 ~d~Gi~~~~~~~p----v~g~lrI~~t~~~t~eeid~fi~aL~~i~~e~~~ 974 (1050)
.++||.+.....| ..+.+|++++..+|++|+|+|+++|++++++++.
T Consensus 386 ~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 386 RLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp HHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 964986213507866378289999945888899999999999999999983
No 10
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=1.00 E-value=1 Score=240.91 Aligned_cols=389 Identities=12% Similarity=0.080 Sum_probs=253.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCHH-HHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHH
Q ss_conf 99645777898999999999821645756543245352--3676501-00024455233267999921110027999999
Q 001579 560 THPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSC--TMKLNAT-TEMMPVTWPSFANIHPFAPADQAQGYQEMFNN 636 (1050)
Q Consensus 560 ~~p~~~~~~se~ei~r~l~~l~~~d~~~~~~~i~lGs~--t~~~~~~-~~~~~~~~~~f~~~~p~~p~e~~~G~~~~~~e 636 (1050)
.+| ..+.++.++++.+.++...+..+. +..++|.- ....+.. .+++...+.. +...| +.+++..+++.+
T Consensus 68 ~~p--~~~~~~~~~~~~~~~~~~~~~~~~-~p~f~~~~~~~~~~~~~~~e~l~~~~~~--~~~~~---~~~p~~~~le~~ 139 (511)
T 3vp6_A 68 ELS--DHPESLEQILVDCRDTLKYGVRTG-HPRFFNQLSTGLDIIGLAGEWLTSTANT--NMFTY---EIAPVFVLMEQI 139 (511)
T ss_dssp CCC--SSCCCHHHHHHHHHHHHHTSCCTT-STTEESSSSCCCCHHHHHHHHHHHHHCC--CSSCT---TTCHHHHHHHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHHCCCCCC-CCCCEEEECCCCCHHHHHHHHHHHHHCC--CCCCC---CCCCHHHHHHHH
T ss_conf 999--899999999999999865447789-9981586469986899999999987456--77770---228038999999
Q ss_pred HHHHHHHHHCCCE---EEECCCCHHHHHHHHHHHHHHHH----HHCCC--CCCCEEEECCCCCCCCHHHHHHCCC---EE
Q ss_conf 9999998629990---31204856899999999999999----96199--9997999939998864998875798---99
Q 001579 637 LGEWLCTITGFDS---FSLQPNAGAAGEYAGLMVIRAYH----KARGD--HHRNVCIIPVSAHGTNPATAAMCGM---KI 704 (1050)
Q Consensus 637 l~~~lael~G~~~---~~l~~~sGa~ge~a~L~airay~----~~~G~--~~r~~VLip~saHgt~pa~a~~~G~---~V 704 (1050)
+.+|+++++|++. ..+++++|++++..++++++... ..+|. .++++|+++..+|.++...+.+.|+ ++
T Consensus 140 ~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~ 219 (511)
T 3vp6_A 140 TLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNV 219 (511)
T ss_dssp HHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGE
T ss_pred HHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCE
T ss_conf 99999998389987880698984599999999999987423666537666887389987973699999999859997747
Q ss_pred EEECCCCCCCCCHHHHHHHHHCC---CCCEEEEEEECCC-CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC-
Q ss_conf 99918999998999999998817---9987999997699-751233279999999997198999966652221366898-
Q 001579 705 VSVGTDAKGNINIEELRKAAEAN---RDNLSTLMVTYPS-THGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSP- 779 (1050)
Q Consensus 705 v~V~~d~~g~iD~e~L~~~i~~~---~~~taaIivt~Ps-~~Gv~~~~I~eI~~ia~e~G~~v~vDgA~~~al~gl~~p- 779 (1050)
+.|++|+++.+|+++|+++|++. +..+.+|++++|+ .+|.++ ++++|+++|+++|+|+|||+|+..+.. ..|
T Consensus 220 ~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd-~l~~I~~ia~~~~~~lhvD~a~~~~~~--~~~~ 296 (511)
T 3vp6_A 220 ILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD-PIQEIADICEKYNLWLHVDAAWGGGLL--MSRK 296 (511)
T ss_dssp EEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBC-CHHHHHHHHHHHTCEEEEEETTGGGGG--GCTT
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC-CHHHHHHHHHHCCCEEEEECCCHHHHH--HCHH
T ss_conf 9960587776299999999998886699847999956888885440-299999999985998999851245676--4901
Q ss_pred ------CCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCC-CCCC----CCCCCCCCCCCC-CCCC-CCCCCCCCCCCH
Q ss_conf ------75567499818963135678888785402001243-3587----899864358899-9988-888888777630
Q 001579 780 ------GYIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPF----LPSHPVVSTGGI-PAPE-KSQPLGTIAAAP 846 (1050)
Q Consensus 780 ------g~~GaDv~~~s~hKtl~~P~g~GGPgvG~i~v~~~-l~~~----lpg~~vg~~~~~-~~~~-~~~~t~~i~sa~ 846 (1050)
|..++|++++++||+|+.|. +.|++++++. +... .+.......... .... ....... +.+
T Consensus 297 ~~~~~~g~~~aDsv~~~~hK~l~~p~-----g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~--~r~ 369 (511)
T 3vp6_A 297 HRHKLNGIERANSVTWNPHKMMGVLL-----QCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQC--GRH 369 (511)
T ss_dssp TGGGGTTGGGCSEEEECTTSTTCCCS-----CCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCS--SCC
T ss_pred HHHHCCCCCCCCEEEECCCCCCCCCC-----CEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCC
T ss_conf 04333687448889988400358986-----76999993889999885369740257665566655766777778--972
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC--CCEEECCCCCCCCEEEEEECCCCCCC-CCC-----
Q ss_conf 3468999999999999775349999999999999999998600--99023378875210389862564345-999-----
Q 001579 847 WGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKH--YPILFRGVNGTVAHEFIVDLRGLKNT-AGI----- 918 (1050)
Q Consensus 847 ~g~~~~l~~a~a~l~~lG~eGl~~~~~~~~~~a~yl~~~L~~~--~~v~~~g~~g~~~~e~iv~~~~~~~~-~g~----- 918 (1050)
+ .+...|++++.+|.+|+.+..++...+++|+.+.|++. +++... ..+....++|.+.+.... .+.
T Consensus 370 ~----~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~--~~p~~~~v~f~~~p~~~~~~~~~~~~~ 443 (511)
T 3vp6_A 370 V----DIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFN--GEPEHTNVCFWYIPQSLRGVPDSPQRR 443 (511)
T ss_dssp C----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSS--SCCSSSCEEEEECCGGGSSCCCCHHHH
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC--CCCCEEEEEEEEECCCCCCCCCCHHHH
T ss_conf 6----8999999999876999999999999999999999856898799865--999768999998675224455545678
Q ss_pred -----CHHHHHHHHHHCCCCCCCCCC-CC-CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -----999999999979903478888-98-99799971-78899999999999999999999
Q 001579 919 -----EPEDVAKRLMDYGFHGPTMSW-PV-PGTLMIEP-TESESKEELDRYCDALISIREEI 972 (1050)
Q Consensus 919 -----~~~diak~L~d~Gi~~~~~~~-pv-~g~lrI~~-t~~~t~eeid~fi~aL~~i~~e~ 972 (1050)
...++.++|.++|+......+ +. .+.+|+++ +..++.+|||+++++|+++.+.+
T Consensus 444 ~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 444 EKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 505 (511)
T ss_dssp HHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 88999999999999956979999788489628999991699999999999999999997765
Done!