Query 001580
Match_columns 1050
No_of_seqs 513 out of 3972
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 04:21:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001580.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001580hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03130 ABC transporter C fam 100.0 2E-156 5E-161 1536.8 115.5 1048 2-1050 575-1622(1622)
2 KOG0054 Multidrug resistance-a 100.0 1E-152 3E-157 1419.3 94.7 891 2-900 477-1373(1381)
3 PLN03232 ABC transporter C fam 100.0 5E-136 1E-140 1345.3 108.9 905 2-910 575-1479(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 6E-127 1E-131 1261.1 108.7 892 2-902 594-1520(1522)
5 KOG0055 Multidrug/pheromone ex 100.0 4E-126 1E-130 1153.7 90.2 877 5-902 311-1225(1228)
6 TIGR01271 CFTR_protein cystic 100.0 5E-122 1E-126 1210.6 106.5 893 2-906 356-1456(1490)
7 PTZ00243 ABC transporter; Prov 100.0 5E-122 1E-126 1210.2 105.6 839 57-904 673-1548(1560)
8 PTZ00265 multidrug resistance 100.0 3E-112 6E-117 1108.8 102.0 889 4-901 344-1464(1466)
9 KOG0058 Peptide exporter, ABC 100.0 3.1E-81 6.8E-86 724.1 61.8 546 344-902 148-704 (716)
10 COG2274 SunT ABC-type bacterio 100.0 1.2E-75 2.6E-80 707.4 68.2 543 344-901 155-707 (709)
11 PRK11174 cysteine/glutathione 100.0 5.5E-71 1.2E-75 676.5 73.0 549 345-901 24-583 (588)
12 COG1123 ATPase components of v 100.0 1.3E-72 2.8E-77 645.9 45.3 464 41-899 5-529 (539)
13 COG1132 MdlB ABC-type multidru 100.0 5.5E-70 1.2E-74 664.0 69.6 539 349-902 20-564 (567)
14 PRK10261 glutathione transport 100.0 3.1E-72 6.7E-77 686.2 50.0 486 39-896 10-560 (623)
15 TIGR01257 rim_protein retinal- 100.0 1.3E-69 2.7E-74 703.9 72.2 310 664-1004 1936-2254(2272)
16 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 4.4E-69 9.6E-74 669.7 73.9 542 344-900 137-683 (686)
17 COG4987 CydC ABC-type transpor 100.0 2.7E-69 5.8E-74 603.7 61.4 503 389-900 66-571 (573)
18 COG4988 CydD ABC-type transpor 100.0 1E-68 2.2E-73 610.3 64.8 509 384-902 43-555 (559)
19 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.8E-68 3.9E-73 667.2 71.4 543 347-899 158-709 (710)
20 TIGR00958 3a01208 Conjugate Tr 100.0 1.9E-68 4.1E-73 663.6 71.1 541 345-898 163-710 (711)
21 PRK13549 xylose transporter AT 100.0 3.1E-71 6.6E-76 665.1 44.6 449 40-887 4-492 (506)
22 PRK11160 cysteine/glutathione 100.0 3.2E-68 7E-73 647.4 71.6 496 389-900 68-572 (574)
23 TIGR01193 bacteriocin_ABC ABC- 100.0 2.4E-68 5.3E-73 665.3 71.6 542 346-900 159-707 (708)
24 PRK10790 putative multidrug tr 100.0 7.1E-68 1.5E-72 649.1 73.1 542 345-901 25-574 (592)
25 KOG0055 Multidrug/pheromone ex 100.0 2.5E-70 5.5E-75 666.5 50.9 513 380-902 70-588 (1228)
26 PRK15134 microcin C ABC transp 100.0 5.9E-71 1.3E-75 666.2 44.4 455 40-891 4-517 (529)
27 TIGR03269 met_CoM_red_A2 methy 100.0 4.7E-71 1E-75 666.1 43.4 438 42-889 1-517 (520)
28 PRK09700 D-allose transporter 100.0 4.6E-71 1E-75 664.7 42.5 446 40-884 4-493 (510)
29 PRK11176 lipid transporter ATP 100.0 1.1E-67 2.3E-72 647.1 72.2 501 388-900 72-577 (582)
30 TIGR03375 type_I_sec_LssB type 100.0 1.7E-67 3.6E-72 656.4 71.6 533 346-890 150-689 (694)
31 PRK15439 autoinducer 2 ABC tra 100.0 5.2E-70 1.1E-74 654.0 46.6 450 40-888 10-491 (510)
32 PRK10762 D-ribose transporter 100.0 2E-70 4.4E-75 657.2 42.9 442 40-887 3-482 (501)
33 PRK15064 ABC transporter ATP-b 100.0 3.5E-69 7.6E-74 650.8 51.7 201 665-890 319-526 (530)
34 PRK11288 araG L-arabinose tran 100.0 8E-70 1.7E-74 652.0 43.9 445 40-888 3-484 (501)
35 TIGR02633 xylG D-xylose ABC tr 100.0 8.7E-70 1.9E-74 652.4 44.1 448 42-887 2-490 (500)
36 PRK10636 putative ABC transpor 100.0 1.9E-68 4.1E-73 653.0 54.5 264 665-954 312-592 (638)
37 COG0488 Uup ATPase components 100.0 5.5E-69 1.2E-73 630.3 47.6 488 40-890 2-526 (530)
38 TIGR01846 type_I_sec_HlyB type 100.0 3.9E-66 8.5E-71 643.6 72.9 542 347-900 143-690 (694)
39 TIGR02203 MsbA_lipidA lipid A 100.0 7.4E-66 1.6E-70 630.0 72.6 543 345-899 16-565 (571)
40 KOG0057 Mitochondrial Fe/S clu 100.0 1E-66 2.2E-71 583.0 57.6 531 355-901 42-585 (591)
41 PRK13657 cyclic beta-1,2-gluca 100.0 3.1E-65 6.6E-70 624.9 72.9 544 346-901 22-569 (588)
42 KOG0056 Heavy metal exporter H 100.0 1.5E-68 3.2E-73 582.1 38.0 497 394-901 272-773 (790)
43 PRK10982 galactose/methyl gala 100.0 2.5E-68 5.4E-73 638.0 43.9 436 44-887 1-478 (491)
44 PRK10938 putative molybdenum t 100.0 1.6E-68 3.5E-73 639.9 42.2 442 41-882 3-485 (490)
45 PRK11819 putative ABC transpor 100.0 2.8E-67 6E-72 636.3 52.4 480 40-890 5-534 (556)
46 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 6.6E-67 1.4E-71 633.1 53.3 480 40-889 3-531 (552)
47 PRK11147 ABC transporter ATPas 100.0 7.3E-67 1.6E-71 640.9 53.4 263 665-954 319-597 (635)
48 TIGR02868 CydC thiol reductant 100.0 3.6E-65 7.8E-70 617.4 65.8 463 390-861 62-529 (529)
49 TIGR01192 chvA glucan exporter 100.0 3.1E-64 6.8E-69 613.2 74.1 545 345-901 21-569 (585)
50 TIGR02204 MsbA_rel ABC transpo 100.0 2.1E-64 4.6E-69 617.5 72.6 547 345-900 20-573 (576)
51 PRK10789 putative multidrug tr 100.0 7.8E-65 1.7E-69 617.6 68.2 504 386-901 41-549 (569)
52 TIGR02857 CydD thiol reductant 100.0 3E-64 6.5E-69 609.4 65.8 516 347-873 7-529 (529)
53 COG4172 ABC-type uncharacteriz 100.0 4.3E-66 9.3E-71 555.2 40.0 458 40-898 5-525 (534)
54 PTZ00265 multidrug resistance 100.0 7.8E-63 1.7E-67 644.7 69.6 564 327-902 45-728 (1466)
55 TIGR01842 type_I_sec_PrtD type 100.0 2.9E-62 6.2E-67 592.9 69.2 526 346-889 9-542 (544)
56 TIGR00956 3a01205 Pleiotropic 100.0 2.9E-63 6.2E-68 648.7 58.1 211 665-886 759-990 (1394)
57 PLN03073 ABC transporter F fam 100.0 2.2E-63 4.8E-68 609.1 52.6 200 664-888 507-713 (718)
58 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.1E-59 2.3E-64 570.5 66.8 481 387-881 59-551 (555)
59 COG1129 MglA ABC-type sugar tr 100.0 4.4E-62 9.5E-67 556.0 41.3 449 39-886 6-487 (500)
60 COG5265 ATM1 ABC-type transpor 100.0 5.6E-62 1.2E-66 527.9 38.2 486 403-900 4-496 (497)
61 PRK13409 putative ATPase RIL; 100.0 5.4E-62 1.2E-66 587.3 40.7 191 665-883 340-536 (590)
62 PLN03140 ABC transporter G fam 100.0 1.9E-59 4.1E-64 609.7 59.8 211 665-885 867-1106(1470)
63 PLN03130 ABC transporter C fam 100.0 2.1E-58 4.6E-63 608.6 70.4 470 406-901 366-839 (1622)
64 PLN03232 ABC transporter C fam 100.0 2.1E-58 4.6E-63 609.1 69.6 471 406-901 366-839 (1495)
65 COG3845 ABC-type uncharacteriz 100.0 1.5E-59 3.2E-64 522.6 37.0 453 40-886 3-489 (501)
66 KOG0054 Multidrug resistance-a 100.0 4.6E-57 1E-61 564.1 63.1 527 349-898 207-739 (1381)
67 PRK10522 multidrug transporter 100.0 2.8E-56 6E-61 540.6 66.7 464 395-881 62-530 (547)
68 COG4618 ArpD ABC-type protease 100.0 2.7E-57 5.8E-62 502.1 48.5 484 387-890 69-561 (580)
69 TIGR00957 MRP_assoc_pro multi 100.0 1.4E-54 3.1E-59 573.5 71.1 529 349-900 323-860 (1522)
70 TIGR01271 CFTR_protein cystic 100.0 1.8E-52 3.8E-57 551.9 69.2 483 387-899 128-645 (1490)
71 TIGR00954 3a01203 Peroxysomal 100.0 9.1E-53 2E-57 516.7 57.8 509 345-874 98-652 (659)
72 PTZ00243 ABC transporter; Prov 100.0 9.4E-51 2E-55 535.6 68.4 532 347-900 248-879 (1560)
73 KOG0927 Predicted transporter 100.0 6.5E-54 1.4E-58 477.8 29.3 200 665-888 389-595 (614)
74 KOG0062 ATPase component of AB 100.0 2.2E-50 4.8E-55 447.4 29.4 200 664-886 361-566 (582)
75 KOG0058 Peptide exporter, ABC 100.0 4.6E-50 9.9E-55 465.1 25.2 263 4-267 427-704 (716)
76 COG1126 GlnQ ABC-type polar am 100.0 7.8E-50 1.7E-54 401.2 22.5 214 666-892 3-228 (240)
77 cd03289 ABCC_CFTR2 The CFTR su 100.0 7E-49 1.5E-53 431.4 28.6 238 665-904 2-239 (275)
78 COG2274 SunT ABC-type bacterio 100.0 2E-48 4.4E-53 470.9 27.3 261 3-265 431-706 (709)
79 PRK11174 cysteine/glutathione 100.0 7.3E-48 1.6E-52 472.2 29.8 260 3-266 309-583 (588)
80 COG1135 AbcC ABC-type metal io 100.0 3.6E-48 7.8E-53 408.4 20.7 220 666-896 2-238 (339)
81 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7.6E-47 1.6E-51 470.4 30.1 260 2-265 412-683 (686)
82 COG1125 OpuBA ABC-type proline 100.0 2.4E-47 5.1E-52 390.0 20.4 219 666-897 2-233 (309)
83 COG4988 CydD ABC-type transpor 100.0 2.3E-46 5E-51 427.4 26.9 258 6-267 282-555 (559)
84 TIGR00958 3a01208 Conjugate Tr 100.0 2.5E-46 5.3E-51 465.6 27.8 259 2-263 438-710 (711)
85 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.7E-46 8E-51 466.4 28.7 259 2-264 430-709 (710)
86 COG1132 MdlB ABC-type multidru 100.0 5.6E-46 1.2E-50 453.1 28.2 262 3-267 290-564 (567)
87 PRK11176 lipid transporter ATP 100.0 6.9E-46 1.5E-50 454.5 28.8 262 3-266 303-578 (582)
88 COG1126 GlnQ ABC-type polar am 100.0 1.9E-46 4.1E-51 376.8 18.3 203 41-257 2-227 (240)
89 PRK14257 phosphate ABC transpo 100.0 2E-45 4.4E-50 414.3 28.1 227 659-892 74-316 (329)
90 TIGR01193 bacteriocin_ABC ABC- 100.0 1.1E-45 2.3E-50 461.7 28.1 260 2-265 432-707 (708)
91 COG1127 Ttg2A ABC-type transpo 100.0 1E-45 2.2E-50 377.3 22.6 216 665-892 8-238 (263)
92 PRK10790 putative multidrug tr 100.0 2.1E-45 4.6E-50 450.6 29.9 261 3-267 303-575 (592)
93 KOG0057 Mitochondrial Fe/S clu 100.0 1.9E-45 4.1E-50 412.3 26.4 222 41-266 351-585 (591)
94 COG1117 PstB ABC-type phosphat 100.0 5.5E-46 1.2E-50 371.2 19.2 219 665-892 7-240 (253)
95 PRK11160 cysteine/glutathione 100.0 4.4E-45 9.6E-50 444.6 29.5 260 3-265 299-572 (574)
96 COG1120 FepC ABC-type cobalami 100.0 1.9E-45 4.1E-50 390.1 22.1 212 666-890 3-229 (258)
97 TIGR03375 type_I_sec_LssB type 100.0 6.3E-45 1.4E-49 453.8 28.4 253 2-256 422-689 (694)
98 cd03288 ABCC_SUR2 The SUR doma 100.0 2.4E-44 5.1E-49 394.7 29.4 237 663-899 17-253 (257)
99 cd03252 ABCC_Hemolysin The ABC 100.0 1.9E-44 4.2E-49 391.2 28.3 231 666-897 1-232 (237)
100 COG4987 CydC ABC-type transpor 100.0 2.4E-45 5.2E-50 411.4 21.7 256 6-264 301-570 (573)
101 KOG0066 eIF2-interacting prote 100.0 8.9E-45 1.9E-49 391.0 24.2 199 665-888 586-790 (807)
102 TIGR02203 MsbA_lipidA lipid A 100.0 1.3E-44 2.9E-49 442.6 28.8 262 2-265 291-566 (571)
103 cd03244 ABCC_MRP_domain2 Domai 100.0 3.7E-44 8.1E-49 384.8 27.0 219 665-883 2-220 (221)
104 KOG0065 Pleiotropic drug resis 100.0 2.8E-43 6.1E-48 428.9 36.0 210 667-886 789-1018(1391)
105 COG3839 MalK ABC-type sugar tr 100.0 2.1E-44 4.6E-49 396.4 22.7 217 665-896 3-230 (338)
106 cd03254 ABCC_Glucan_exporter_l 100.0 1.1E-43 2.5E-48 383.2 27.1 225 665-890 2-227 (229)
107 PRK13657 cyclic beta-1,2-gluca 100.0 9.1E-44 2E-48 435.6 29.7 262 3-267 294-570 (588)
108 TIGR02204 MsbA_rel ABC transpo 100.0 7.1E-44 1.5E-48 436.4 28.7 263 2-265 295-573 (576)
109 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.7E-44 8E-49 378.0 22.1 209 665-890 4-228 (254)
110 cd03251 ABCC_MsbA MsbA is an e 100.0 1.5E-43 3.2E-48 383.7 27.3 226 666-891 1-227 (234)
111 COG4618 ArpD ABC-type protease 100.0 5.3E-44 1.1E-48 396.5 24.1 248 6-255 300-560 (580)
112 PRK10789 putative multidrug tr 100.0 1.3E-43 2.7E-48 431.8 29.3 262 3-266 275-549 (569)
113 COG1116 TauB ABC-type nitrate/ 100.0 3.6E-44 7.8E-49 372.4 20.3 197 665-879 3-212 (248)
114 COG3842 PotA ABC-type spermidi 100.0 2E-44 4.3E-49 398.7 19.1 217 665-896 5-233 (352)
115 TIGR02314 ABC_MetN D-methionin 100.0 7.3E-44 1.6E-48 402.1 24.0 219 666-895 2-236 (343)
116 COG1124 DppF ABC-type dipeptid 100.0 1.4E-43 3E-48 364.0 22.3 222 665-897 3-239 (252)
117 TIGR01846 type_I_sec_HlyB type 100.0 2.5E-43 5.4E-48 439.1 29.1 261 3-265 416-690 (694)
118 KOG0056 Heavy metal exporter H 100.0 6.2E-44 1.3E-48 389.8 19.3 261 5-268 499-775 (790)
119 cd03253 ABCC_ATM1_transporter 100.0 8.6E-43 1.9E-47 378.1 28.1 224 666-890 1-225 (236)
120 TIGR01842 type_I_sec_PrtD type 100.0 5E-43 1.1E-47 424.9 29.0 251 3-255 279-542 (544)
121 COG2884 FtsE Predicted ATPase 100.0 7.2E-44 1.6E-48 349.9 17.1 206 666-883 2-220 (223)
122 COG4555 NatA ABC-type Na+ tran 100.0 4.9E-44 1.1E-48 353.7 15.7 217 666-891 2-224 (245)
123 cd03245 ABCC_bacteriocin_expor 100.0 7.3E-43 1.6E-47 374.6 26.2 218 665-882 2-220 (220)
124 COG1122 CbiO ABC-type cobalt t 100.0 1.9E-43 4.2E-48 375.5 21.3 214 665-890 3-229 (235)
125 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1E-42 2.3E-47 377.9 26.6 225 666-890 1-227 (238)
126 COG3638 ABC-type phosphate/pho 100.0 4.8E-43 1E-47 356.8 21.5 213 665-889 3-237 (258)
127 COG1136 SalX ABC-type antimicr 100.0 8.5E-43 1.8E-47 362.8 23.8 204 666-879 2-221 (226)
128 cd03261 ABC_Org_Solvent_Resist 100.0 5.5E-43 1.2E-47 379.3 23.0 216 666-890 1-227 (235)
129 COG3840 ThiQ ABC-type thiamine 100.0 5.3E-43 1.2E-47 340.5 20.1 209 666-891 2-221 (231)
130 COG1245 Predicted ATPase, RNas 100.0 1.7E-42 3.6E-47 378.3 26.2 183 666-875 343-531 (591)
131 TIGR01192 chvA glucan exporter 100.0 2E-42 4.4E-47 421.8 29.5 261 3-266 294-569 (585)
132 COG1118 CysA ABC-type sulfate/ 100.0 3E-43 6.5E-48 370.0 18.5 216 666-896 3-234 (345)
133 cd03369 ABCC_NFT1 Domain 2 of 100.0 2.6E-42 5.5E-47 366.6 25.8 207 660-884 1-207 (207)
134 PRK11650 ugpC glycerol-3-phosp 100.0 1.7E-42 3.7E-47 394.2 25.8 214 666-893 4-228 (356)
135 COG1137 YhbG ABC-type (unclass 100.0 8.5E-44 1.8E-48 351.6 12.6 223 665-891 4-230 (243)
136 PRK13537 nodulation ABC transp 100.0 1.2E-42 2.7E-47 389.2 23.3 216 665-890 7-228 (306)
137 PRK13631 cbiO cobalt transport 100.0 3.3E-42 7.1E-47 387.2 26.5 220 664-890 20-266 (320)
138 cd03260 ABC_PstB_phosphate_tra 100.0 1.4E-42 3E-47 374.2 22.4 209 666-887 1-227 (227)
139 PRK11432 fbpC ferric transport 100.0 2.1E-42 4.6E-47 392.3 24.8 216 665-895 6-232 (351)
140 TIGR03265 PhnT2 putative 2-ami 100.0 2.7E-42 5.9E-47 392.2 23.8 220 665-895 4-230 (353)
141 PRK14250 phosphate ABC transpo 100.0 7.1E-42 1.5E-46 371.7 25.9 213 666-891 4-223 (241)
142 PRK11153 metN DL-methionine tr 100.0 3.4E-42 7.3E-47 391.5 23.9 220 666-892 2-233 (343)
143 TIGR02868 CydC thiol reductant 100.0 4.2E-42 9.1E-47 416.2 26.1 222 3-227 292-529 (529)
144 COG1131 CcmA ABC-type multidru 100.0 2.9E-42 6.2E-47 382.5 22.3 213 665-890 4-227 (293)
145 PRK13650 cbiO cobalt transport 100.0 5.6E-42 1.2E-46 379.9 23.9 215 665-890 4-230 (279)
146 PRK13647 cbiO cobalt transport 100.0 5.7E-42 1.2E-46 378.9 23.7 212 665-888 4-226 (274)
147 TIGR02857 CydD thiol reductant 100.0 6.5E-42 1.4E-46 414.5 26.2 235 3-239 282-529 (529)
148 COG1135 AbcC ABC-type metal io 100.0 1.7E-42 3.6E-47 365.6 18.0 206 41-257 1-233 (339)
149 PRK14269 phosphate ABC transpo 100.0 1.1E-41 2.5E-46 371.3 25.1 217 666-891 3-232 (246)
150 cd03296 ABC_CysA_sulfate_impor 100.0 1.2E-41 2.5E-46 369.8 24.9 215 666-891 3-228 (239)
151 TIGR03258 PhnT 2-aminoethylpho 100.0 6E-42 1.3E-46 389.8 23.6 217 664-895 4-234 (362)
152 TIGR00960 3a0501s02 Type II (G 100.0 3.5E-42 7.6E-47 368.1 20.3 202 666-878 2-216 (216)
153 PRK13637 cbiO cobalt transport 100.0 1.2E-41 2.6E-46 378.7 25.1 218 666-890 3-235 (287)
154 cd03248 ABCC_TAP TAP, the Tran 100.0 1.1E-41 2.5E-46 366.8 24.2 216 663-878 9-226 (226)
155 PRK10851 sulfate/thiosulfate t 100.0 1.1E-41 2.4E-46 387.3 25.2 213 666-893 3-230 (353)
156 PRK09536 btuD corrinoid ABC tr 100.0 7.8E-42 1.7E-46 392.1 24.1 212 666-890 4-229 (402)
157 COG0410 LivF ABC-type branched 100.0 1.1E-41 2.4E-46 347.8 22.4 221 665-891 3-228 (237)
158 TIGR01186 proV glycine betaine 100.0 4.4E-42 9.6E-47 389.5 21.5 205 681-896 7-226 (363)
159 cd03256 ABC_PhnC_transporter A 100.0 8.3E-42 1.8E-46 371.7 22.8 220 666-888 1-233 (241)
160 cd03219 ABC_Mj1267_LivG_branch 100.0 9E-42 1.9E-46 370.2 22.9 220 666-889 1-232 (236)
161 cd03263 ABC_subfamily_A The AB 100.0 8.6E-42 1.9E-46 366.3 22.4 214 666-887 1-219 (220)
162 PRK13536 nodulation factor exp 100.0 9.5E-42 2.1E-46 385.8 23.5 216 665-890 41-262 (340)
163 PRK13635 cbiO cobalt transport 100.0 1.3E-41 2.9E-46 376.7 24.2 215 665-890 5-230 (279)
164 cd03259 ABC_Carb_Solutes_like 100.0 7.4E-42 1.6E-46 364.8 21.1 206 666-882 1-213 (213)
165 PRK13643 cbiO cobalt transport 100.0 1.3E-41 2.8E-46 378.5 23.8 217 666-889 2-233 (288)
166 PRK09452 potA putrescine/sperm 100.0 1.6E-41 3.4E-46 387.7 24.9 216 665-895 14-240 (375)
167 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.7E-41 3.8E-46 357.8 23.3 204 40-258 3-230 (254)
168 TIGR02315 ABC_phnC phosphonate 100.0 1.5E-41 3.1E-46 370.2 23.3 220 666-888 2-234 (243)
169 cd03224 ABC_TM1139_LivF_branch 100.0 1.4E-41 2.9E-46 365.3 22.7 216 666-889 1-221 (222)
170 TIGR00972 3a0107s01c2 phosphat 100.0 2.3E-41 4.9E-46 369.4 24.7 217 666-891 2-234 (247)
171 COG1127 Ttg2A ABC-type transpo 100.0 1.4E-41 3E-46 347.0 21.0 212 39-264 6-245 (263)
172 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.1E-41 4.5E-46 368.5 23.8 217 666-890 1-226 (242)
173 PRK14242 phosphate transporter 100.0 3E-41 6.5E-46 369.8 25.2 218 665-891 6-239 (253)
174 TIGR03522 GldA_ABC_ATP gliding 100.0 1.8E-41 3.9E-46 379.8 23.8 215 666-890 3-222 (301)
175 PRK11000 maltose/maltodextrin 100.0 1.9E-41 4E-46 388.4 24.5 212 666-892 4-226 (369)
176 cd03258 ABC_MetN_methionine_tr 100.0 1.9E-41 4.1E-46 366.9 22.9 217 666-889 2-230 (233)
177 cd03265 ABC_DrrA DrrA is the A 100.0 1.5E-41 3.2E-46 364.3 21.8 208 666-887 1-219 (220)
178 PRK14273 phosphate ABC transpo 100.0 3.9E-41 8.5E-46 369.0 25.5 219 665-892 7-241 (254)
179 COG1116 TauB ABC-type nitrate/ 100.0 1.1E-41 2.4E-46 353.8 19.8 189 40-242 2-207 (248)
180 PRK13646 cbiO cobalt transport 100.0 3.1E-41 6.6E-46 375.4 24.7 218 666-890 3-236 (286)
181 PRK10744 pstB phosphate transp 100.0 6.8E-41 1.5E-45 368.2 26.5 219 664-891 12-246 (260)
182 COG0411 LivG ABC-type branched 100.0 6.9E-42 1.5E-46 351.9 17.2 220 666-891 5-241 (250)
183 PRK13651 cobalt transporter AT 100.0 2.9E-41 6.3E-46 377.3 23.8 218 666-890 3-255 (305)
184 PRK13634 cbiO cobalt transport 100.0 3.7E-41 8E-46 375.3 24.3 218 666-890 3-236 (290)
185 PRK14247 phosphate ABC transpo 100.0 4.7E-41 1E-45 367.7 24.6 217 666-891 4-236 (250)
186 PRK13636 cbiO cobalt transport 100.0 3.8E-41 8.1E-46 374.1 24.0 213 665-889 5-231 (283)
187 cd03218 ABC_YhbG The ABC trans 100.0 2.9E-41 6.2E-46 365.3 22.5 215 666-889 1-222 (232)
188 PRK14235 phosphate transporter 100.0 7.2E-41 1.6E-45 369.1 26.0 218 664-890 18-252 (267)
189 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.7E-41 3.6E-46 363.5 20.4 206 666-878 1-218 (218)
190 COG4615 PvdE ABC-type sideroph 100.0 1.4E-38 3.1E-43 341.6 42.5 460 394-881 61-529 (546)
191 TIGR01288 nodI ATP-binding ABC 100.0 3.6E-41 7.8E-46 378.0 23.7 216 665-890 4-225 (303)
192 cd03226 ABC_cobalt_CbiO_domain 100.0 2.3E-41 4.9E-46 358.8 20.9 198 667-879 1-205 (205)
193 cd03268 ABC_BcrA_bacitracin_re 100.0 3.5E-41 7.6E-46 358.2 22.3 202 666-882 1-208 (208)
194 PRK13652 cbiO cobalt transport 100.0 5.1E-41 1.1E-45 372.1 24.4 213 666-890 4-228 (277)
195 PRK11607 potG putrescine trans 100.0 4.4E-41 9.6E-46 384.7 24.4 216 665-895 19-245 (377)
196 PRK14267 phosphate ABC transpo 100.0 5.3E-41 1.2E-45 367.9 24.1 218 665-891 4-239 (253)
197 PRK14259 phosphate ABC transpo 100.0 1.1E-40 2.4E-45 367.9 26.6 219 664-891 12-255 (269)
198 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.5E-41 1.2E-45 363.8 23.7 215 666-890 2-222 (236)
199 cd03264 ABC_drug_resistance_li 100.0 3.2E-41 7E-46 359.3 21.5 202 666-882 1-211 (211)
200 PRK15079 oligopeptide ABC tran 100.0 6.6E-41 1.4E-45 378.0 25.0 226 665-897 8-259 (331)
201 PRK10575 iron-hydroxamate tran 100.0 5E-41 1.1E-45 370.1 23.4 212 665-889 11-237 (265)
202 COG1120 FepC ABC-type cobalami 100.0 2.8E-41 6.1E-46 358.3 20.5 203 41-257 2-230 (258)
203 PRK13644 cbiO cobalt transport 100.0 6.5E-41 1.4E-45 370.5 24.3 217 666-890 2-225 (274)
204 PRK11629 lolD lipoprotein tran 100.0 4.4E-41 9.5E-46 363.8 22.4 212 665-883 5-228 (233)
205 cd03294 ABC_Pro_Gly_Bertaine T 100.0 3.1E-41 6.8E-46 372.2 21.6 213 667-892 26-253 (269)
206 PRK10070 glycine betaine trans 100.0 5.9E-41 1.3E-45 384.6 24.5 219 666-895 5-260 (400)
207 cd03266 ABC_NatA_sodium_export 100.0 4.3E-41 9.4E-46 360.3 21.7 209 666-882 2-218 (218)
208 TIGR03411 urea_trans_UrtD urea 100.0 8.6E-41 1.9E-45 363.8 24.3 220 666-889 3-231 (242)
209 PRK11831 putative ABC transpor 100.0 6.5E-41 1.4E-45 369.9 23.4 217 665-890 7-234 (269)
210 PRK13640 cbiO cobalt transport 100.0 8.4E-41 1.8E-45 371.1 24.3 214 665-889 5-232 (282)
211 PRK14274 phosphate ABC transpo 100.0 1.5E-40 3.2E-45 365.4 25.8 218 665-891 12-245 (259)
212 TIGR03005 ectoine_ehuA ectoine 100.0 1E-40 2.2E-45 365.4 24.3 217 666-891 1-238 (252)
213 PRK10895 lipopolysaccharide AB 100.0 9E-41 2E-45 363.3 23.8 215 666-889 4-226 (241)
214 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.5E-40 3.2E-45 365.5 25.7 224 42-268 3-238 (275)
215 cd03301 ABC_MalK_N The N-termi 100.0 4.4E-41 9.4E-46 359.0 20.8 206 666-882 1-213 (213)
216 PRK09493 glnQ glutamine ABC tr 100.0 1.1E-40 2.4E-45 362.5 24.3 216 666-890 2-226 (240)
217 PRK13632 cbiO cobalt transport 100.0 8.8E-41 1.9E-45 369.2 23.8 219 665-890 7-232 (271)
218 cd03250 ABCC_MRP_domain1 Domai 100.0 1.1E-40 2.4E-45 353.2 23.4 199 666-877 1-204 (204)
219 PRK11264 putative amino-acid A 100.0 2.3E-40 4.9E-45 362.3 26.5 217 666-891 4-235 (250)
220 cd03225 ABC_cobalt_CbiO_domain 100.0 4.7E-41 1E-45 358.1 20.4 204 667-877 1-211 (211)
221 cd03247 ABCC_cytochrome_bd The 100.0 9.8E-41 2.1E-45 345.7 22.1 178 666-882 1-178 (178)
222 PRK13548 hmuV hemin importer A 100.0 1.8E-40 4E-45 364.0 25.5 211 666-889 3-230 (258)
223 PRK11231 fecE iron-dicitrate t 100.0 1E-40 2.2E-45 365.9 23.3 211 666-889 3-227 (255)
224 COG1125 OpuBA ABC-type proline 100.0 1.9E-41 4.1E-46 346.7 16.2 203 41-257 1-227 (309)
225 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.3E-41 1.2E-45 360.0 20.5 208 666-885 1-219 (220)
226 PRK14240 phosphate transporter 100.0 2.1E-40 4.5E-45 362.5 25.4 218 665-891 3-236 (250)
227 PRK11614 livF leucine/isoleuci 100.0 1.8E-40 3.8E-45 360.2 24.6 217 665-889 5-226 (237)
228 PRK10253 iron-enterobactin tra 100.0 1.2E-40 2.5E-45 367.2 23.4 213 664-889 6-233 (265)
229 PRK14245 phosphate ABC transpo 100.0 1.4E-40 3.1E-45 363.7 23.9 218 665-891 3-236 (250)
230 PRK13641 cbiO cobalt transport 100.0 1.5E-40 3.4E-45 369.9 24.3 217 666-889 3-234 (287)
231 TIGR02211 LolD_lipo_ex lipopro 100.0 9E-41 2E-45 358.6 21.6 207 666-879 2-220 (221)
232 PRK14268 phosphate ABC transpo 100.0 2E-40 4.4E-45 364.0 24.8 218 665-891 12-244 (258)
233 PRK10619 histidine/lysine/argi 100.0 2.4E-40 5.2E-45 363.4 25.4 218 664-890 4-242 (257)
234 PRK14239 phosphate transporter 100.0 2E-40 4.4E-45 363.1 24.8 218 665-891 5-238 (252)
235 TIGR01188 drrA daunorubicin re 100.0 7.1E-41 1.5E-45 375.4 21.4 207 674-890 2-214 (302)
236 PRK14248 phosphate ABC transpo 100.0 2.6E-40 5.6E-45 365.2 25.6 218 665-891 21-254 (268)
237 PRK11124 artP arginine transpo 100.0 1.7E-40 3.6E-45 361.5 23.6 215 666-889 3-230 (242)
238 PRK11308 dppF dipeptide transp 100.0 2.3E-40 5.1E-45 373.2 25.6 223 665-897 5-252 (327)
239 TIGR03410 urea_trans_UrtE urea 100.0 9.2E-41 2E-45 360.7 21.4 211 666-888 1-220 (230)
240 PRK13648 cbiO cobalt transport 100.0 1.4E-40 3E-45 367.4 23.2 215 665-890 7-232 (269)
241 PRK13649 cbiO cobalt transport 100.0 1.8E-40 3.9E-45 368.9 24.2 217 666-889 3-234 (280)
242 PRK13642 cbiO cobalt transport 100.0 1.9E-40 4.2E-45 367.5 24.3 215 665-890 4-230 (277)
243 cd03257 ABC_NikE_OppD_transpor 100.0 1.2E-40 2.6E-45 359.5 21.9 211 666-882 2-228 (228)
244 PRK11247 ssuB aliphatic sulfon 100.0 2.1E-40 4.5E-45 362.0 24.1 203 665-885 12-219 (257)
245 COG4175 ProV ABC-type proline/ 100.0 3.9E-41 8.4E-46 353.8 17.4 223 665-898 4-263 (386)
246 PRK13633 cobalt transporter AT 100.0 2.1E-40 4.5E-45 367.8 24.3 215 665-890 4-234 (280)
247 PRK14256 phosphate ABC transpo 100.0 3.3E-40 7E-45 361.3 25.3 219 664-891 3-238 (252)
248 PRK14237 phosphate transporter 100.0 3.9E-40 8.5E-45 363.3 26.0 218 665-891 20-253 (267)
249 TIGR02673 FtsE cell division A 100.0 8.9E-41 1.9E-45 356.8 20.2 200 666-877 2-214 (214)
250 TIGR02769 nickel_nikE nickel i 100.0 3.6E-40 7.9E-45 363.3 25.5 218 666-890 3-241 (265)
251 PRK14243 phosphate transporter 100.0 5.2E-40 1.1E-44 361.7 26.6 218 665-891 10-250 (264)
252 PRK14251 phosphate ABC transpo 100.0 2.3E-40 5E-45 362.4 23.7 218 665-891 4-237 (251)
253 PRK13638 cbiO cobalt transport 100.0 1.9E-40 4.2E-45 366.7 23.2 212 666-890 2-226 (271)
254 PRK11022 dppD dipeptide transp 100.0 3E-40 6.6E-45 372.5 25.2 224 666-897 4-251 (326)
255 cd03292 ABC_FtsE_transporter F 100.0 1.5E-40 3.3E-45 355.1 21.1 201 666-878 1-214 (214)
256 PRK14249 phosphate ABC transpo 100.0 5.5E-40 1.2E-44 359.3 26.0 218 665-891 4-237 (251)
257 PRK14238 phosphate transporter 100.0 4.5E-40 9.7E-45 363.4 25.5 219 664-891 23-257 (271)
258 TIGR03873 F420-0_ABC_ATP propo 100.0 2.5E-40 5.5E-45 362.9 23.4 220 666-889 2-226 (256)
259 PRK14262 phosphate ABC transpo 100.0 3.3E-40 7.2E-45 360.9 24.2 218 665-891 3-236 (250)
260 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.1E-39 2.4E-44 359.9 28.4 210 664-890 38-248 (282)
261 cd03235 ABC_Metallic_Cations A 100.0 1.2E-40 2.6E-45 355.5 20.2 196 668-882 2-213 (213)
262 PRK14257 phosphate ABC transpo 100.0 2E-40 4.2E-45 373.8 22.7 211 38-257 77-315 (329)
263 PRK14270 phosphate ABC transpo 100.0 5.1E-40 1.1E-44 359.6 25.3 218 665-891 4-237 (251)
264 cd03246 ABCC_Protease_Secretio 100.0 2.9E-40 6.2E-45 340.4 21.9 172 666-878 1-173 (173)
265 PRK14244 phosphate ABC transpo 100.0 2.2E-40 4.7E-45 362.5 22.3 218 666-892 6-240 (251)
266 PRK13645 cbiO cobalt transport 100.0 2.7E-40 5.8E-45 368.8 23.5 219 664-889 5-240 (289)
267 PRK11300 livG leucine/isoleuci 100.0 3.7E-40 8.1E-45 361.7 24.2 221 665-889 5-243 (255)
268 PRK14253 phosphate ABC transpo 100.0 6E-40 1.3E-44 358.7 25.5 217 665-890 3-234 (249)
269 PRK10908 cell division protein 100.0 2.7E-40 5.9E-45 355.0 22.3 203 666-880 2-217 (222)
270 PRK14236 phosphate transporter 100.0 6.3E-40 1.4E-44 362.6 25.8 218 664-890 24-257 (272)
271 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.6E-40 7.8E-45 351.3 22.8 200 666-882 1-211 (211)
272 PRK13639 cbiO cobalt transport 100.0 2.8E-40 6.1E-45 365.8 22.7 213 666-890 2-227 (275)
273 PRK14261 phosphate ABC transpo 100.0 5.6E-40 1.2E-44 359.7 24.7 218 665-891 6-239 (253)
274 cd03290 ABCC_SUR1_N The SUR do 100.0 4.9E-40 1.1E-44 352.1 23.7 210 667-877 2-218 (218)
275 TIGR03415 ABC_choXWV_ATP choli 100.0 1.9E-40 4.2E-45 377.6 21.6 205 681-896 38-261 (382)
276 COG1122 CbiO ABC-type cobalt t 100.0 2E-40 4.4E-45 352.4 20.4 205 40-257 2-230 (235)
277 COG3839 MalK ABC-type sugar tr 100.0 1.8E-40 3.9E-45 365.4 20.6 204 40-257 2-225 (338)
278 TIGR01257 rim_protein retinal- 100.0 8.7E-41 1.9E-45 435.5 21.1 224 665-896 928-1156(2272)
279 COG1117 PstB ABC-type phosphat 100.0 5.7E-41 1.2E-45 335.3 14.8 208 39-257 5-239 (253)
280 PRK10584 putative ABC transpor 100.0 5.4E-40 1.2E-44 354.3 23.6 206 665-881 6-227 (228)
281 cd03269 ABC_putative_ATPase Th 100.0 2.2E-40 4.8E-45 352.7 20.2 204 666-882 1-210 (210)
282 PRK10771 thiQ thiamine transpo 100.0 1E-39 2.2E-44 353.0 25.6 208 666-890 2-220 (232)
283 cd03262 ABC_HisP_GlnQ_permease 100.0 2.4E-40 5.3E-45 353.2 20.3 204 666-878 1-213 (213)
284 PRK14254 phosphate ABC transpo 100.0 1.4E-39 2.9E-44 361.5 26.8 219 664-891 38-271 (285)
285 PRK14260 phosphate ABC transpo 100.0 7.6E-40 1.6E-44 359.7 24.5 218 665-891 7-245 (259)
286 PRK10247 putative ABC transpor 100.0 4.5E-40 9.7E-45 353.8 22.1 210 665-885 7-223 (225)
287 PRK14241 phosphate transporter 100.0 8.3E-40 1.8E-44 359.3 24.6 217 665-890 4-243 (258)
288 COG5265 ATM1 ABC-type transpor 100.0 1.9E-40 4.1E-45 360.5 19.1 257 6-265 224-496 (497)
289 cd03300 ABC_PotA_N PotA is an 100.0 4.4E-40 9.4E-45 355.7 21.8 210 666-890 1-221 (232)
290 PRK09473 oppD oligopeptide tra 100.0 7.7E-40 1.7E-44 369.5 24.7 226 665-898 12-260 (330)
291 TIGR00968 3a0106s01 sulfate AB 100.0 9.5E-40 2.1E-44 354.1 24.4 214 666-890 1-221 (237)
292 PRK14266 phosphate ABC transpo 100.0 1E-39 2.2E-44 357.1 24.8 218 666-892 4-237 (250)
293 PRK11701 phnK phosphonate C-P 100.0 1.8E-39 3.9E-44 356.6 26.7 218 665-891 6-243 (258)
294 PRK14271 phosphate ABC transpo 100.0 2.1E-39 4.5E-44 358.6 27.2 220 665-891 21-253 (276)
295 PRK15093 antimicrobial peptide 100.0 8.3E-40 1.8E-44 370.3 24.3 224 666-897 4-256 (330)
296 PRK14265 phosphate ABC transpo 100.0 1.9E-39 4.2E-44 358.7 26.6 218 665-891 20-260 (274)
297 PRK15112 antimicrobial peptide 100.0 1.1E-39 2.4E-44 359.7 24.4 217 665-891 4-241 (267)
298 PRK14252 phosphate ABC transpo 100.0 1.4E-39 3.1E-44 358.7 25.3 220 663-891 14-251 (265)
299 PRK14275 phosphate ABC transpo 100.0 1.2E-39 2.6E-44 362.4 24.8 219 665-892 39-273 (286)
300 COG1118 CysA ABC-type sulfate/ 100.0 1.8E-40 3.9E-45 349.1 17.0 203 41-257 2-229 (345)
301 PRK14263 phosphate ABC transpo 100.0 1.6E-39 3.4E-44 356.9 25.0 218 665-891 8-247 (261)
302 PRK14272 phosphate ABC transpo 100.0 1.9E-39 4E-44 355.6 25.4 218 666-892 5-239 (252)
303 COG3842 PotA ABC-type spermidi 100.0 2.3E-40 5E-45 366.4 18.3 204 40-257 4-228 (352)
304 PRK13547 hmuV hemin importer A 100.0 1.6E-39 3.5E-44 357.9 24.9 220 666-889 2-244 (272)
305 PRK09984 phosphonate/organopho 100.0 1.2E-39 2.7E-44 358.8 23.4 219 665-887 4-240 (262)
306 TIGR01978 sufC FeS assembly AT 100.0 7.7E-40 1.7E-44 356.7 21.6 215 666-889 1-234 (243)
307 PRK11144 modC molybdate transp 100.0 1.3E-39 2.8E-44 371.6 24.0 211 666-892 2-221 (352)
308 PRK00349 uvrA excinuclease ABC 100.0 5.9E-39 1.3E-43 398.4 31.3 102 791-892 818-930 (943)
309 PRK14258 phosphate ABC transpo 100.0 2.4E-39 5.2E-44 355.9 24.3 218 665-891 7-247 (261)
310 TIGR01277 thiQ thiamine ABC tr 100.0 1.7E-39 3.7E-44 346.5 22.3 201 666-883 1-212 (213)
311 cd03299 ABC_ModC_like Archeal 100.0 2.3E-39 4.9E-44 350.7 23.6 209 666-890 1-220 (235)
312 COG2884 FtsE Predicted ATPase 100.0 6.8E-40 1.5E-44 321.9 17.3 194 41-247 1-218 (223)
313 PRK11248 tauB taurine transpor 100.0 1.8E-39 4E-44 355.1 22.5 206 666-885 2-216 (255)
314 PRK14264 phosphate ABC transpo 100.0 4.3E-39 9.4E-44 361.0 25.7 218 664-890 44-290 (305)
315 PRK14246 phosphate ABC transpo 100.0 4E-39 8.7E-44 352.8 24.6 219 665-892 10-244 (257)
316 PRK14255 phosphate ABC transpo 100.0 3.7E-39 8E-44 353.1 24.2 218 665-891 5-238 (252)
317 COG1136 SalX ABC-type antimicr 100.0 2.3E-39 5E-44 337.2 21.3 194 42-245 2-221 (226)
318 cd03228 ABCC_MRP_Like The MRP 100.0 2.7E-39 5.9E-44 332.5 21.5 171 666-877 1-171 (171)
319 COG4559 ABC-type hemin transpo 100.0 2.3E-39 5E-44 323.0 19.3 212 666-890 2-231 (259)
320 TIGR03740 galliderm_ABC gallid 100.0 4.1E-39 8.8E-44 346.2 22.9 204 666-886 1-210 (223)
321 COG3638 ABC-type phosphate/pho 100.0 9.9E-40 2.2E-44 332.6 16.9 202 40-254 2-236 (258)
322 cd03252 ABCC_Hemolysin The ABC 100.0 8.7E-39 1.9E-43 347.0 25.2 221 42-264 1-234 (237)
323 TIGR02142 modC_ABC molybdenum 100.0 3.3E-39 7.3E-44 368.8 22.6 212 670-892 4-224 (354)
324 PRK10419 nikE nickel transport 100.0 1.4E-38 3E-43 350.9 25.7 226 666-896 4-247 (268)
325 TIGR02323 CP_lyasePhnK phospho 100.0 8E-39 1.7E-43 350.6 23.5 218 665-891 3-240 (253)
326 cd03229 ABC_Class3 This class 100.0 6.2E-39 1.3E-43 332.1 21.3 172 666-877 1-178 (178)
327 PRK10418 nikD nickel transport 100.0 1.1E-38 2.3E-43 349.5 24.4 214 665-891 4-232 (254)
328 TIGR02982 heterocyst_DevA ABC 100.0 4.7E-39 1E-43 344.9 20.8 206 666-878 2-219 (220)
329 cd03230 ABC_DR_subfamily_A Thi 100.0 7.8E-39 1.7E-43 329.8 20.6 170 666-878 1-173 (173)
330 cd03291 ABCC_CFTR1 The CFTR su 100.0 7.1E-38 1.5E-42 345.5 29.2 221 34-260 32-252 (282)
331 cd03297 ABC_ModC_molybdenum_tr 100.0 1E-38 2.2E-43 340.8 21.7 201 670-882 5-214 (214)
332 PRK09544 znuC high-affinity zi 100.0 1.6E-38 3.5E-43 346.3 23.6 200 665-889 4-209 (251)
333 cd03234 ABCG_White The White s 100.0 9.2E-39 2E-43 344.0 20.8 212 666-882 4-226 (226)
334 COG3840 ThiQ ABC-type thiamine 100.0 5E-39 1.1E-43 312.8 16.6 199 42-256 2-220 (231)
335 TIGR02314 ABC_MetN D-methionin 100.0 7.4E-39 1.6E-43 361.4 20.7 205 41-256 1-231 (343)
336 PRK00635 excinuclease ABC subu 100.0 1.6E-37 3.5E-42 398.9 35.4 211 665-890 600-907 (1809)
337 PRK13631 cbiO cobalt transport 100.0 2.7E-38 5.8E-43 355.5 24.4 217 33-259 13-269 (320)
338 COG0444 DppD ABC-type dipeptid 100.0 1.7E-38 3.7E-43 341.1 21.7 226 666-899 2-253 (316)
339 PRK15056 manganese/iron transp 100.0 2.3E-38 5E-43 350.1 23.4 209 665-889 6-230 (272)
340 cd03233 ABC_PDR_domain1 The pl 100.0 2E-38 4.4E-43 334.9 21.2 189 666-882 4-202 (202)
341 COG4619 ABC-type uncharacteriz 100.0 6.6E-39 1.4E-43 307.6 15.8 194 675-878 11-212 (223)
342 cd03217 ABC_FeS_Assembly ABC-t 100.0 3.1E-38 6.7E-43 333.1 22.5 185 666-888 1-192 (200)
343 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 4.9E-38 1.1E-42 341.3 24.6 214 42-256 1-227 (238)
344 cd03214 ABC_Iron-Siderophores_ 100.0 1.6E-38 3.5E-43 329.6 19.7 177 667-882 1-180 (180)
345 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.2E-38 4.9E-43 384.3 24.1 239 2-247 288-551 (555)
346 cd03250 ABCC_MRP_domain1 Domai 100.0 5.1E-38 1.1E-42 332.9 23.8 201 42-243 1-204 (204)
347 cd03213 ABCG_EPDR ABCG transpo 100.0 2.1E-38 4.5E-43 332.6 20.3 182 665-882 3-194 (194)
348 cd03251 ABCC_MsbA MsbA is an e 100.0 4.5E-38 9.8E-43 340.7 23.6 214 42-257 1-227 (234)
349 PRK10522 multidrug transporter 100.0 3E-38 6.5E-43 383.1 24.6 235 2-247 283-530 (547)
350 PRK11650 ugpC glycerol-3-phosp 100.0 2.7E-38 5.8E-43 359.9 22.5 203 41-256 3-225 (356)
351 cd03253 ABCC_ATM1_transporter 100.0 8E-38 1.7E-42 339.2 25.0 218 42-262 1-231 (236)
352 COG4152 ABC-type uncharacteriz 100.0 4.4E-39 9.5E-44 327.2 14.0 215 665-892 2-222 (300)
353 COG1124 DppF ABC-type dipeptid 100.0 3.9E-38 8.4E-43 323.8 21.1 206 40-256 2-232 (252)
354 cd03215 ABC_Carb_Monos_II This 100.0 2.5E-38 5.5E-43 328.7 19.4 172 665-878 4-182 (182)
355 cd03254 ABCC_Glucan_exporter_l 100.0 7.2E-38 1.6E-42 338.0 23.5 211 41-254 2-225 (229)
356 TIGR03608 L_ocin_972_ABC putat 100.0 1.9E-38 4.2E-43 336.8 18.5 193 668-873 1-206 (206)
357 PRK15439 autoinducer 2 ABC tra 100.0 5.9E-38 1.3E-42 376.8 24.9 215 665-889 11-229 (510)
358 PRK11432 fbpC ferric transport 100.0 3.9E-38 8.5E-43 357.5 21.9 204 39-256 4-227 (351)
359 cd03261 ABC_Org_Solvent_Resist 100.0 3.7E-38 8E-43 341.5 20.5 201 42-256 1-227 (235)
360 cd03288 ABCC_SUR2 The SUR doma 100.0 1.9E-37 4.2E-42 340.1 26.3 223 40-264 18-253 (257)
361 CHL00131 ycf16 sulfate ABC tra 100.0 9.2E-38 2E-42 342.1 23.7 217 665-887 7-239 (252)
362 PRK03695 vitamin B12-transport 100.0 7.3E-38 1.6E-42 341.4 22.6 209 667-889 2-222 (248)
363 cd03244 ABCC_MRP_domain2 Domai 100.0 1.4E-37 3E-42 333.9 24.3 206 42-249 3-220 (221)
364 cd03267 ABC_NatA_like Similar 100.0 3.3E-38 7.3E-43 341.6 19.5 194 681-882 35-236 (236)
365 cd03232 ABC_PDR_domain2 The pl 100.0 4.6E-38 1E-42 329.5 19.6 181 665-882 3-192 (192)
366 cd03216 ABC_Carb_Monos_I This 100.0 1.2E-37 2.6E-42 317.4 21.5 159 666-880 1-162 (163)
367 cd03223 ABCD_peroxisomal_ALDP 100.0 9.6E-38 2.1E-42 319.1 20.7 163 666-876 1-163 (166)
368 PRK13651 cobalt transporter AT 100.0 1.4E-37 3.1E-42 347.6 23.6 207 41-257 2-256 (305)
369 PRK13537 nodulation ABC transp 100.0 7E-38 1.5E-42 350.9 20.9 202 40-255 6-227 (306)
370 TIGR02770 nickel_nikD nickel i 100.0 1.1E-37 2.4E-42 336.4 21.4 202 682-892 1-218 (230)
371 TIGR03265 PhnT2 putative 2-ami 100.0 7.3E-38 1.6E-42 355.9 20.9 203 40-256 3-225 (353)
372 PRK09700 D-allose transporter 100.0 1E-37 2.2E-42 375.6 23.4 216 665-889 5-234 (510)
373 PRK13650 cbiO cobalt transport 100.0 1.6E-37 3.4E-42 344.4 23.0 206 41-257 4-231 (279)
374 cd03231 ABC_CcmA_heme_exporter 100.0 1.5E-37 3.3E-42 328.2 21.7 194 666-873 1-198 (201)
375 PRK13549 xylose transporter AT 100.0 1.3E-37 2.8E-42 374.1 23.9 215 665-888 5-231 (506)
376 PRK10762 D-ribose transporter 100.0 1.5E-37 3.3E-42 373.1 24.1 215 665-888 4-229 (501)
377 TIGR00630 uvra excinuclease AB 100.0 1E-36 2.3E-41 377.7 32.2 97 791-887 816-923 (924)
378 COG4178 ABC-type uncharacteriz 100.0 3.3E-34 7.2E-39 333.6 51.0 467 384-874 89-587 (604)
379 PRK09580 sufC cysteine desulfu 100.0 1.9E-37 4.1E-42 338.9 22.5 218 666-887 2-233 (248)
380 cd03245 ABCC_bacteriocin_expor 100.0 3.9E-37 8.5E-42 330.2 24.5 204 42-247 3-219 (220)
381 COG1123 ATPase components of v 100.0 1.2E-37 2.5E-42 358.1 21.6 226 665-899 5-254 (539)
382 PRK13643 cbiO cobalt transport 100.0 1.8E-37 4E-42 345.2 22.5 207 41-257 1-235 (288)
383 PRK13538 cytochrome c biogenes 100.0 1.5E-37 3.3E-42 329.1 20.7 194 666-873 2-202 (204)
384 PRK09452 potA putrescine/sperm 100.0 1.6E-37 3.4E-42 354.8 22.2 204 39-256 12-235 (375)
385 TIGR01184 ntrCD nitrate transp 100.0 8.1E-38 1.7E-42 337.3 18.5 194 683-888 1-203 (230)
386 COG4598 HisP ABC-type histidin 100.0 4.1E-38 8.8E-43 305.0 14.3 220 665-893 6-245 (256)
387 PRK13637 cbiO cobalt transport 100.0 1.7E-37 3.6E-42 345.4 20.8 207 41-256 2-235 (287)
388 TIGR00960 3a0501s02 Type II (G 100.0 1.1E-37 2.5E-42 333.3 18.6 192 41-244 1-216 (216)
389 PRK10938 putative molybdenum t 100.0 2.4E-37 5.3E-42 370.7 23.6 210 666-889 4-224 (490)
390 PRK13536 nodulation factor exp 100.0 1.9E-37 4E-42 350.9 21.0 204 38-255 38-261 (340)
391 TIGR03258 PhnT 2-aminoethylpho 100.0 1.7E-37 3.8E-42 353.2 20.4 202 41-256 5-229 (362)
392 PRK10851 sulfate/thiosulfate t 100.0 3E-37 6.4E-42 351.0 22.2 202 41-256 2-227 (353)
393 PRK11153 metN DL-methionine tr 100.0 2.4E-37 5.3E-42 351.7 21.5 205 41-256 1-231 (343)
394 COG4181 Predicted ABC-type tra 100.0 1.4E-37 3.1E-42 299.4 16.3 205 665-880 6-226 (228)
395 cd03259 ABC_Carb_Solutes_like 100.0 2E-37 4.3E-42 330.7 19.4 193 42-248 1-213 (213)
396 PRK11000 maltose/maltodextrin 100.0 2.7E-37 5.8E-42 354.1 21.8 202 41-256 3-224 (369)
397 PRK13540 cytochrome c biogenes 100.0 3E-37 6.5E-42 325.8 20.3 193 666-872 2-198 (200)
398 cd03296 ABC_CysA_sulfate_impor 100.0 4.4E-37 9.5E-42 333.9 22.1 201 41-255 2-226 (239)
399 PRK09536 btuD corrinoid ABC tr 100.0 4.2E-37 9.1E-42 353.0 23.0 204 40-257 2-230 (402)
400 PRK13647 cbiO cobalt transport 100.0 3E-37 6.5E-42 341.2 21.0 200 41-253 4-225 (274)
401 PRK13634 cbiO cobalt transport 100.0 4.8E-37 1E-41 342.2 22.7 207 42-258 3-238 (290)
402 cd03219 ABC_Mj1267_LivG_branch 100.0 2.5E-37 5.5E-42 335.3 19.7 200 42-255 1-232 (236)
403 PRK13646 cbiO cobalt transport 100.0 5E-37 1.1E-41 341.6 22.2 207 41-257 2-237 (286)
404 PRK13543 cytochrome c biogenes 100.0 4.8E-37 1E-41 327.7 21.2 195 665-875 11-212 (214)
405 PRK10982 galactose/methyl gala 100.0 3.4E-37 7.4E-42 369.3 22.1 212 668-888 1-222 (491)
406 PRK11247 ssuB aliphatic sulfon 100.0 8.4E-37 1.8E-41 333.6 23.1 199 39-251 10-219 (257)
407 PRK13635 cbiO cobalt transport 100.0 9.7E-37 2.1E-41 337.9 23.7 208 40-259 4-233 (279)
408 TIGR01288 nodI ATP-binding ABC 100.0 4.8E-37 1E-41 344.6 21.3 202 40-255 3-224 (303)
409 COG0410 LivF ABC-type branched 100.0 4.7E-37 1E-41 313.8 19.2 213 40-259 2-230 (237)
410 PRK11607 potG putrescine trans 100.0 5.4E-37 1.2E-41 351.1 21.9 205 38-256 16-240 (377)
411 cd03260 ABC_PstB_phosphate_tra 100.0 5.6E-37 1.2E-41 330.6 20.7 198 42-252 1-226 (227)
412 COG1131 CcmA ABC-type multidru 100.0 5.7E-37 1.2E-41 340.1 21.2 202 40-254 3-225 (293)
413 cd03265 ABC_DrrA DrrA is the A 100.0 4.5E-37 9.8E-42 329.6 19.6 197 42-252 1-218 (220)
414 COG1137 YhbG ABC-type (unclass 100.0 2.4E-38 5.3E-43 312.9 8.9 212 40-259 3-232 (243)
415 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.6E-37 1.2E-41 328.8 20.0 198 42-250 1-218 (220)
416 PRK11629 lolD lipoprotein tran 100.0 7.6E-37 1.6E-41 330.7 21.1 199 40-249 4-228 (233)
417 TIGR02315 ABC_phnC phosphonate 100.0 6.3E-37 1.4E-41 333.7 20.6 199 42-253 2-233 (243)
418 PRK13644 cbiO cobalt transport 100.0 1.1E-36 2.3E-41 336.9 22.5 203 41-256 1-225 (274)
419 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.7E-37 1E-41 329.1 19.0 192 42-244 1-218 (218)
420 cd03226 ABC_cobalt_CbiO_domain 100.0 6.7E-37 1.4E-41 324.6 20.0 189 44-245 2-205 (205)
421 PRK11288 araG L-arabinose tran 100.0 7.9E-37 1.7E-41 366.9 23.1 211 665-884 4-224 (501)
422 PRK14250 phosphate ABC transpo 100.0 1.4E-36 3E-41 330.2 22.8 203 41-256 3-222 (241)
423 cd03258 ABC_MetN_methionine_tr 100.0 7.3E-37 1.6E-41 331.0 20.3 202 42-254 2-229 (233)
424 PRK13539 cytochrome c biogenes 100.0 1.3E-36 2.7E-41 322.7 21.6 193 666-875 3-200 (207)
425 PRK10261 glutathione transport 100.0 7.6E-37 1.6E-41 374.5 22.8 220 665-891 12-260 (623)
426 COG4555 NatA ABC-type Na+ tran 100.0 2.4E-37 5.2E-42 306.3 14.6 202 41-255 1-222 (245)
427 cd03290 ABCC_SUR1_N The SUR do 100.0 2.2E-36 4.8E-41 323.8 23.4 199 43-243 2-218 (218)
428 cd03268 ABC_BcrA_bacitracin_re 100.0 1.2E-36 2.6E-41 323.5 21.1 193 42-248 1-208 (208)
429 PRK15134 microcin C ABC transp 100.0 1.2E-36 2.7E-41 367.6 24.0 219 665-891 5-248 (529)
430 TIGR01189 ccmA heme ABC export 100.0 8.3E-37 1.8E-41 322.0 19.4 192 666-872 1-197 (198)
431 TIGR02633 xylG D-xylose ABC tr 100.0 1.1E-36 2.4E-41 366.0 23.1 213 666-887 2-228 (500)
432 PRK13641 cbiO cobalt transport 100.0 1.6E-36 3.4E-41 337.8 22.4 206 41-256 2-235 (287)
433 PRK13636 cbiO cobalt transport 100.0 1.7E-36 3.7E-41 336.8 22.6 206 40-258 4-234 (283)
434 COG4608 AppF ABC-type oligopep 100.0 1E-36 2.2E-41 320.9 19.5 197 665-901 4-211 (268)
435 cd03256 ABC_PhnC_transporter A 100.0 9.7E-37 2.1E-41 331.9 20.1 199 42-253 1-232 (241)
436 PRK00635 excinuclease ABC subu 100.0 6.6E-35 1.4E-39 375.0 40.2 93 797-889 1382-1483(1809)
437 cd03218 ABC_YhbG The ABC trans 100.0 1.4E-36 3.1E-41 328.5 21.2 200 42-255 1-222 (232)
438 TIGR01186 proV glycine betaine 100.0 5.8E-37 1.3E-41 347.8 18.8 190 56-256 5-220 (363)
439 cd03369 ABCC_NFT1 Domain 2 of 100.0 3.6E-36 7.7E-41 319.5 23.7 190 40-249 5-206 (207)
440 cd03301 ABC_MalK_N The N-termi 100.0 1.5E-36 3.3E-41 324.0 20.8 193 42-248 1-213 (213)
441 cd03248 ABCC_TAP TAP, the Tran 100.0 2.7E-36 5.8E-41 325.0 22.8 204 40-244 10-226 (226)
442 cd03266 ABC_NatA_sodium_export 100.0 1.4E-36 3E-41 325.5 20.1 196 42-248 2-218 (218)
443 PRK14273 phosphate ABC transpo 100.0 2.5E-36 5.3E-41 331.1 22.5 206 40-256 6-239 (254)
444 cd03235 ABC_Metallic_Cations A 100.0 1.3E-36 2.9E-41 324.3 19.8 190 43-247 1-212 (213)
445 cd03224 ABC_TM1139_LivF_branch 100.0 1.7E-36 3.7E-41 325.8 20.7 200 42-254 1-220 (222)
446 PRK10584 putative ABC transpor 100.0 2.3E-36 4.9E-41 326.1 21.7 196 40-246 5-226 (228)
447 TIGR02211 LolD_lipo_ex lipopro 100.0 1.8E-36 3.9E-41 325.3 20.8 193 42-245 2-220 (221)
448 COG1129 MglA ABC-type sugar tr 100.0 2E-36 4.4E-41 345.8 22.3 216 665-884 8-229 (500)
449 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.9E-36 4.1E-41 328.3 20.7 201 41-255 1-221 (236)
450 PRK13633 cobalt transporter AT 100.0 3.3E-36 7.2E-41 334.2 23.1 207 41-258 4-236 (280)
451 PRK13640 cbiO cobalt transport 100.0 4E-36 8.8E-41 333.6 23.7 206 40-257 4-234 (282)
452 TIGR00954 3a01203 Peroxysomal 100.0 6.9E-36 1.5E-40 367.4 27.9 232 3-241 388-653 (659)
453 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.3E-36 2.8E-41 335.5 19.1 200 43-256 26-251 (269)
454 PRK13642 cbiO cobalt transport 100.0 3.9E-36 8.4E-41 333.1 23.0 207 41-258 4-232 (277)
455 COG4161 ArtP ABC-type arginine 100.0 8.1E-37 1.8E-41 290.7 14.9 212 665-889 2-230 (242)
456 PRK14242 phosphate transporter 100.0 2.8E-36 6.1E-41 330.5 21.4 206 40-256 5-238 (253)
457 PRK11264 putative amino-acid A 100.0 1.5E-36 3.2E-41 332.2 19.1 201 41-255 3-233 (250)
458 PRK13546 teichoic acids export 100.0 4.1E-36 8.9E-41 329.2 22.5 207 665-891 4-234 (264)
459 TIGR02673 FtsE cell division A 100.0 1.6E-36 3.6E-41 323.9 18.8 189 42-243 2-214 (214)
460 TIGR03269 met_CoM_red_A2 methy 100.0 1.6E-36 3.5E-41 366.0 21.1 215 666-889 1-258 (520)
461 TIGR00972 3a0107s01c2 phosphat 100.0 3.1E-36 6.7E-41 328.9 21.3 204 41-255 1-232 (247)
462 PRK11831 putative ABC transpor 100.0 2.4E-36 5.2E-41 333.5 20.6 203 40-256 6-234 (269)
463 TIGR02324 CP_lyasePhnL phospho 100.0 2.5E-36 5.5E-41 324.8 20.1 201 666-873 2-222 (224)
464 PRK09493 glnQ glutamine ABC tr 100.0 3.5E-36 7.6E-41 327.1 21.3 201 42-256 2-226 (240)
465 cd03269 ABC_putative_ATPase Th 100.0 2.6E-36 5.6E-41 321.4 19.8 192 42-247 1-209 (210)
466 PRK13632 cbiO cobalt transport 100.0 4.6E-36 1E-40 331.6 22.5 206 40-257 6-233 (271)
467 PRK15079 oligopeptide ABC tran 100.0 3.2E-36 7E-41 339.9 21.6 208 39-256 6-252 (331)
468 PRK11614 livF leucine/isoleuci 100.0 6E-36 1.3E-40 324.7 22.9 203 40-256 4-227 (237)
469 PRK13652 cbiO cobalt transport 100.0 6.7E-36 1.4E-40 331.2 23.3 205 40-257 2-229 (277)
470 cd03263 ABC_subfamily_A The AB 100.0 3.5E-36 7.6E-41 322.8 20.3 199 42-253 1-219 (220)
471 PRK10895 lipopolysaccharide AB 100.0 6.2E-36 1.3E-40 325.4 22.4 201 41-255 3-226 (241)
472 PRK13649 cbiO cobalt transport 100.0 4.3E-36 9.3E-41 333.8 21.4 206 41-256 2-235 (280)
473 PRK13638 cbiO cobalt transport 100.0 4.8E-36 1E-40 331.6 21.5 202 41-256 1-226 (271)
474 COG4175 ProV ABC-type proline/ 100.0 1.4E-36 3E-41 319.6 15.8 207 40-257 3-256 (386)
475 PRK13645 cbiO cobalt transport 100.0 7E-36 1.5E-40 333.3 22.5 207 41-257 6-242 (289)
476 TIGR03522 GldA_ABC_ATP gliding 100.0 3.6E-36 7.7E-41 337.0 20.1 200 41-255 2-221 (301)
477 PRK11231 fecE iron-dicitrate t 100.0 6.4E-36 1.4E-40 327.9 21.6 201 41-255 2-227 (255)
478 PRK11124 artP arginine transpo 100.0 5.8E-36 1.3E-40 325.8 21.1 200 41-254 2-229 (242)
479 PRK13639 cbiO cobalt transport 100.0 5.6E-36 1.2E-40 331.5 21.3 203 41-256 1-227 (275)
480 cd03292 ABC_FtsE_transporter F 100.0 3.4E-36 7.4E-41 321.5 18.9 190 42-244 1-214 (214)
481 PRK14248 phosphate ABC transpo 100.0 9.6E-36 2.1E-40 328.8 23.1 210 36-256 16-253 (268)
482 PRK10575 iron-hydroxamate tran 100.0 7.4E-36 1.6E-40 329.0 22.1 203 39-255 9-237 (265)
483 PRK10070 glycine betaine trans 100.0 4.3E-36 9.2E-41 344.5 20.9 205 41-256 4-255 (400)
484 COG4604 CeuD ABC-type enteroch 100.0 8.6E-37 1.9E-41 300.8 13.0 212 666-890 2-226 (252)
485 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.5E-36 9.8E-41 326.6 20.1 203 42-255 1-225 (242)
486 PRK11300 livG leucine/isoleuci 100.0 9.3E-36 2E-40 326.9 22.7 203 40-256 4-244 (255)
487 PRK14269 phosphate ABC transpo 100.0 5.3E-36 1.2E-40 326.7 20.6 204 41-255 2-230 (246)
488 PRK13548 hmuV hemin importer A 100.0 1.1E-35 2.4E-40 326.2 23.2 201 41-255 2-230 (258)
489 PRK10619 histidine/lysine/argi 100.0 4.9E-36 1.1E-40 329.2 20.4 202 41-255 5-241 (257)
490 PRK13648 cbiO cobalt transport 100.0 8.9E-36 1.9E-40 329.1 22.5 206 40-257 6-233 (269)
491 TIGR03411 urea_trans_UrtD urea 100.0 8.3E-36 1.8E-40 324.6 21.7 200 41-255 2-231 (242)
492 TIGR01166 cbiO cobalt transpor 100.0 2.7E-36 5.9E-41 316.0 17.2 173 680-863 5-189 (190)
493 COG0411 LivG ABC-type branched 100.0 1.1E-36 2.4E-41 313.4 13.8 206 40-259 3-243 (250)
494 TIGR03771 anch_rpt_ABC anchore 100.0 3.5E-36 7.6E-41 323.0 18.3 186 688-890 1-202 (223)
495 TIGR03410 urea_trans_UrtE urea 100.0 5.6E-36 1.2E-40 323.4 19.9 199 42-253 1-219 (230)
496 cd03225 ABC_cobalt_CbiO_domain 100.0 4.3E-36 9.4E-41 319.9 18.8 189 43-243 1-211 (211)
497 COG4525 TauB ABC-type taurine 100.0 2.9E-36 6.4E-41 296.3 15.9 211 666-885 4-220 (259)
498 TIGR03740 galliderm_ABC gallid 100.0 9.6E-36 2.1E-40 320.0 21.5 197 42-252 1-210 (223)
499 PRK10744 pstB phosphate transp 100.0 1.1E-35 2.4E-40 326.9 22.3 207 39-256 11-245 (260)
500 PRK11248 tauB taurine transpor 100.0 1.1E-35 2.3E-40 325.4 22.1 196 41-250 1-215 (255)
No 1
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.2e-156 Score=1536.80 Aligned_cols=1048 Identities=86% Similarity=1.292 Sum_probs=901.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGE 81 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGs 81 (1050)
|..++++.++++|++||++||+.+|....++++..++...|+++|++|+|+.++++++|+|+||++++|++++|+|++||
T Consensus 575 ~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGS 654 (1622)
T PLN03130 575 PNLITQAVNANVSLKRLEELLLAEERVLLPNPPLEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGE 654 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcccccccCCcccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCC
Confidence 56788999999999999999998765332232222233469999999999855457899999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCeeEEeCcEEEEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcccc
Q 001580 82 GKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEI 161 (1050)
Q Consensus 82 GKSTLl~~l~G~~~~~~g~~~~~~~~i~~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v 161 (1050)
|||||+++|+|+++|++|+...+++.|+||+|+||+|++||+|||+||.++++++|.++++.|++.++++.+|+||+|.+
T Consensus 655 GKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~I 734 (1622)
T PLN03130 655 GKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEI 734 (1622)
T ss_pred CHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccc
Confidence 99999999999999998445557889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcC
Q 001580 162 GERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHE 241 (1050)
Q Consensus 162 g~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~ 241 (1050)
|++|.+|||||||||+||||||++|+|||||||||+||+++.+.+++.+++...+|+|+|+|||+++++..+|+|++|++
T Consensus 735 Ge~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~ 814 (1622)
T PLN03130 735 GERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHE 814 (1622)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999998887655578999999999999999999999999
Q ss_pred CeEeeccChhhhhcChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhh
Q 001580 242 GMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEE 321 (1050)
Q Consensus 242 G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1050)
|++++.|+++++.+..+.|..+....+..++..++.... ........+.........+............+..+..++.
T Consensus 815 G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 893 (1622)
T PLN03130 815 GMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEE-EDDQTSSKPVANGNANNLKKDSSSKKKSKEGKSVLIKQEE 893 (1622)
T ss_pred CEEEEeCCHHHHHhcchhHHHHHHhcccccccccccccc-cccccccccccccccccccccccccccccccchhhhhHHH
Confidence 999999999999988888888776543221111100000 0000000000000000000000000001111122344566
Q ss_pred hhcccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHH
Q 001580 322 RETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLAN 401 (1050)
Q Consensus 322 ~~~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~ 401 (1050)
++.|.+++.++++|+++.|+.+.++++++++++.+.+....+.|+++|.+..........++..+|++++++..++.+++
T Consensus 894 ~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~i~~~l~~~~~i~~~~~ 973 (1622)
T PLN03130 894 RETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTHGPLFYNLIYALLSFGQVLVTLLN 973 (1622)
T ss_pred HhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 77888999999999998887777777777777888888889999999988654333445667778888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 402 SYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVST 481 (1050)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1050)
.++....+.+++.++|.+++++++++|+.||+++++|+++||+++|+..++..++..+..++..++.++.+++++.++.+
T Consensus 974 ~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~ 1053 (1622)
T PLN03130 974 SYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVST 1053 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888888888888888888888778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 482 MSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNM 561 (1050)
Q Consensus 482 ~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (1050)
+.++.++|++++++..+.++.+..++.++....+++++++++.|+++|+++||+|+.++++.+.+.+..+...+..+...
T Consensus 1054 ~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~ 1133 (1622)
T PLN03130 1054 ISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNM 1133 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778888877777777788888899999999999999999999999999999999999999999999999988888888
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 001580 562 GANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYI 641 (1050)
Q Consensus 562 ~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~ 641 (1050)
..++|+.+++.+++.+++++++.+.+..++.......+...+|.+++++..+..++.++.+.....++.+.+++|+.+++
T Consensus 1134 ~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~ 1213 (1622)
T PLN03130 1134 SSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYI 1213 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999988888887777776666554433334455678899999999999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCc
Q 001580 642 ELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER 721 (1050)
Q Consensus 642 ~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~ 721 (1050)
+.|+|.+...+...+++.||..|.|+|+||+|+|+++.+++|+|+||+|+|||++|||||||||||||+++|+|+|+|++
T Consensus 1214 ~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~ 1293 (1622)
T PLN03130 1214 DLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELER 1293 (1622)
T ss_pred CCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCC
Confidence 98877653333333455688888999999999997655579999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCC
Q 001580 722 GRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGE 801 (1050)
Q Consensus 722 G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~ 801 (1050)
|+|.+||+|+++++++++|++|+||||+|.+|++|||+||+++.+++|++++++++.++++++++.+|.||||.+|++|.
T Consensus 1294 G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~ 1373 (1622)
T PLN03130 1294 GRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGE 1373 (1622)
T ss_pred ceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEe
Q 001580 802 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 881 (1050)
Q Consensus 802 ~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~ 881 (1050)
+|||||||||||||||+++|+|||||||||+||++|++.|++.|++.++++|+|+||||++++.+||||+||++|+|+|.
T Consensus 1374 nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~ 1453 (1622)
T PLN03130 1374 NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEF 1453 (1622)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred cChhHHhhcCCChHHHHHHhhccchHHHHHHHhhcccchhhhhhhhhccchhhhHHHhhHHHHHhccchhhcccccCccc
Q 001580 882 DTPEELLSNEGSSFSKMVQSTGAANAQYLRSLVLGGEAENKLREENKQIDGQRRWLASSRWAAAAQYALAVSLTSSHNDL 961 (1050)
Q Consensus 882 g~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 961 (1050)
|+|+||++++++.|+++++.++....+.+.........+.....+....+.+.++.+..+|+.+++.+.+.++.+++.++
T Consensus 1454 Gt~~eLl~~~~g~f~~L~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1533 (1622)
T PLN03130 1454 DTPENLLSNEGSAFSKMVQSTGAANAQYLRSLVFGGDEDRLAREESKALDGQRKWLASSRWAAAAQFALAVSLTSSQNDL 1533 (1622)
T ss_pred CCHHHHHhCCCCHHHHHHHHcChhhhHHHHHHHhccccccccccchhcccchhhHHHhhhcccchhhhhhhhccccccch
Confidence 99999998877899999988777665555544322111112223344567778888888888888888999999999999
Q ss_pred hhchhhhhhhHHhhcchhhhhHHHhhcCCCchhhhhhhcccccchhhHHHHHHHHHhhhhhhhHhhhhccccCCCCCCCc
Q 001580 962 QRLEVEDQNNILKKTKDAVVTLQGVLEGKHDKEIEESLNQHEVSTDGWWSALYRMIEGLSVMSRLARNRLHQSDYDLEER 1041 (1050)
Q Consensus 962 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1050)
+.+++++..++++++|+++.++++|.+|+||+.+.+.+.++++++|+||+++|+|+||+++|+|+++||.||++|+|++.
T Consensus 1534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1613 (1622)
T PLN03130 1534 QSLEIEDENSILEKTKDAVITLQSVLEGKHDKEIDESLNQRQVPRDGWWSSLYRMVEGLAVMSRLARNRMQQSDHNFEGK 1613 (1622)
T ss_pred hccccCCchhhhhhhhhhHhHHHHhhccccccccchhhhhccCCcccchHHHHHHHhccccchhHHHHhhccCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCccCCC
Q 001580 1042 SIDWDHVEM 1050 (1050)
Q Consensus 1042 ~~~~~~~~~ 1050 (1050)
++|||++||
T Consensus 1614 ~~~~~~~~~ 1622 (1622)
T PLN03130 1614 SIDWDNVEM 1622 (1622)
T ss_pred cCChhhhcC
Confidence 999999997
No 2
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-152 Score=1419.34 Aligned_cols=891 Identities=52% Similarity=0.867 Sum_probs=802.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCCCC--CCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPNP--PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGT 79 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~--~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~n 79 (1050)
|.+|.++++|+||++|+++||..||......+ +..++...|+++|++|+|++....+.|+||||+|++|+.+||||+.
T Consensus 477 P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~v 556 (1381)
T KOG0054|consen 477 PSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPV 556 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCC
Confidence 78999999999999999999999997655443 4455566799999999999755567999999999999999999999
Q ss_pred CCcHHHHHHHHHcCCCCCCCCeeEEeCcEEEEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcc
Q 001580 80 GEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVT 159 (1050)
Q Consensus 80 GsGKSTLl~~l~G~~~~~~g~~~~~~~~i~~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t 159 (1050)
|||||+||.+|+|+++..+|. ..++|.++||||.||++++||+|||+||.++++++|++++++|+|.+|++.+|.||.|
T Consensus 557 GsGKSSLL~AiLGEm~~~sG~-v~v~gsiaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~T 635 (1381)
T KOG0054|consen 557 GSGKSSLLSAILGEMPKLSGS-VAVNGSVAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLT 635 (1381)
T ss_pred CCCHHHHHHHHhcCcccccce-EEEcCeEEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcc
Confidence 999999999999999999875 4577789999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEE
Q 001580 160 EIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILV 239 (1050)
Q Consensus 160 ~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l 239 (1050)
+|||+|.+|||||||||+||||+|+++||||||+|+|++|+++.++||+.|++...++||+|+|||.++++++||+|++|
T Consensus 636 eIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl 715 (1381)
T KOG0054|consen 636 EIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVL 715 (1381)
T ss_pred eecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEe
Confidence 99999999999999999999999999999999999999999999999999998778899999999999999999999999
Q ss_pred cCCeEeeccChhhhhcChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCC-CCCCCCCCccccccccccccchhhh
Q 001580 240 HEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAAN-GVDNDLPKEASDTRKTKEGKSVLIK 318 (1050)
Q Consensus 240 ~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (1050)
++|+|.+.|+++|+++.+..|..+..+........ .... ............ ........................+
T Consensus 716 ~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1381)
T KOG0054|consen 716 KDGKIVESGTYEELLKSGGDFAELAHEEESEQEEE--ASEK-DLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQ 792 (1381)
T ss_pred cCCeEecccCHHHHHhcchhHHHHhhccchhhccc--cccc-cccccccccchhhhhhhhhcccccccccccchhhHHHH
Confidence 99999999999999988888887733221111100 0000 000000000000 0000000000001111111234456
Q ss_pred hhhhhcccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCC---CChhHHHHHHHHHHHHHH
Q 001580 319 QEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKT---HGPLFYNTIYSLLSFGQV 395 (1050)
Q Consensus 319 ~~~~~~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~ll~~~~~ 395 (1050)
+++++.|.++|++|+.|+++.++++.+++++++.+..+.+.....+|+++|.+...... ....+|..+|.++++++.
T Consensus 793 ~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~ 872 (1381)
T KOG0054|consen 793 EEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASS 872 (1381)
T ss_pred HHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHH
Confidence 67789999999999999999777777777788888899999999999999998865443 467889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 396 LVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVL 475 (1050)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1050)
++.+++++++...+.++++.+|+.++++++|.||.||+++|+|+|+|||++|++.+|..++..+..++..++.+++++++
T Consensus 873 ~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~v 952 (1381)
T KOG0054|consen 873 LLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVV 952 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHH
Q 001580 476 IGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIR 555 (1050)
Q Consensus 476 ~~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~ 555 (1050)
+.++.|+.+++++|+.++++....+|.+++|+++|+++.+++|+++|++|++.|+.|||||+.+++|.+.+....+.+.+
T Consensus 953 i~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~ 1032 (1381)
T KOG0054|consen 953 ISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSR 1032 (1381)
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 556 YTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVE 635 (1050)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 635 (1050)
..+.....++|++++++.+++++++.++.++++..... ...+.+|+.++|+++++..++++.+.....|+.+.++|
T Consensus 1033 ~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~----~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVE 1108 (1381)
T KOG0054|consen 1033 AFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGL----ISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVE 1108 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC----CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhh
Confidence 99999999999999999999999999999888765542 11567999999999999999999999999999999999
Q ss_pred HHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhc
Q 001580 636 RVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFR 715 (1050)
Q Consensus 636 R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g 715 (1050)
|+.+|.+.|+|.|...+...+++.||..|.|+|+|++.+|+++.++||+||||+|+|||+|||||++|||||||+++|.|
T Consensus 1109 Rv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFR 1188 (1381)
T KOG0054|consen 1109 RVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFR 1188 (1381)
T ss_pred HHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHH
Confidence 99999999988555555555889999999999999999999888899999999999999999999999999999999999
Q ss_pred cccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchh
Q 001580 716 IVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQ 795 (1050)
Q Consensus 716 ~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~ 795 (1050)
+.+|.+|+|.|||+||.+++.+++|++++++||||.||+||+|.||||+.+++|+++|+||+.|++.+++.++|.|||+.
T Consensus 1189 l~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~ 1268 (1381)
T KOG0054|consen 1189 LVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSE 1268 (1381)
T ss_pred hcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeC
Q 001580 796 VSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDS 875 (1050)
Q Consensus 796 v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~ 875 (1050)
+.|+|.|+|-||||.+||||||+++++||+|||+|+++|++|...|++.|++.+++||||.|+||++++.+||||+|||+
T Consensus 1269 v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~ 1348 (1381)
T KOG0054|consen 1269 VSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDA 1348 (1381)
T ss_pred ecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecChhHHhhcCCChHHHHHH
Q 001580 876 GRVLEYDTPEELLSNEGSSFSKMVQ 900 (1050)
Q Consensus 876 G~i~~~g~~~el~~~~~~~~~~~~~ 900 (1050)
|+|+|+|+|.+|++++++.|..++.
T Consensus 1349 G~v~EfdsP~~Ll~~~~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1349 GRVVEFDSPAELLSDKDSLFSSLLK 1373 (1381)
T ss_pred CeEeecCChHHHHhCCcchHHHHHH
Confidence 9999999999999998888874443
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.2e-136 Score=1345.31 Aligned_cols=905 Identities=76% Similarity=1.172 Sum_probs=766.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGE 81 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGs 81 (1050)
+..++++.+|++|++||++||+.++....+.++..++...|+++|++|+|+.+.++++|+|+||++++|++++|+|++||
T Consensus 575 ~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGS 654 (1495)
T PLN03232 575 PNLLSQVVNANVSLQRIEELLLSEERILAQNPPLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGE 654 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCccccccccCCcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCC
Confidence 56788999999999999999998764322222222233469999999999854457899999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCeeEEeCcEEEEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcccc
Q 001580 82 GKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEI 161 (1050)
Q Consensus 82 GKSTLl~~l~G~~~~~~g~~~~~~~~i~~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~v 161 (1050)
|||||+++|+|+++|++|+...+++.|+||+|+||+|++||+|||+||.+++++++.++++.|++.++++.+|+||+|.+
T Consensus 655 GKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~I 734 (1495)
T PLN03232 655 GKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEI 734 (1495)
T ss_pred cHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCcee
Confidence 99999999999999999988888999999999999999999999999998999999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcC
Q 001580 162 GERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHE 241 (1050)
Q Consensus 162 g~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~ 241 (1050)
|++|.+|||||||||+||||||++|+|||||||||+||+++++++++.+++...+++|+|+|||+++.+..||+|++|++
T Consensus 735 Ge~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~ 814 (1495)
T PLN03232 735 GERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSE 814 (1495)
T ss_pred cCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999887655678999999999999999999999999
Q ss_pred CeEeeccChhhhhcChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhh
Q 001580 242 GMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEE 321 (1050)
Q Consensus 242 G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1050)
|++++.|+++++.+..+.|..+.......++..++....+..... .+... . ...........+.+........+++
T Consensus 815 G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~e~ 890 (1495)
T PLN03232 815 GMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKL--GPTVT-I-DVSERNLGSTKQGKRGRSVLVKQEE 890 (1495)
T ss_pred CEEEEecCHHHHHhcchhHHHHHHhcccccccccccccccccccc--ccccc-c-cccccccccccccccchhhhhhHHH
Confidence 999999999999988888888776543211110000000000000 00000 0 0000000000001111122345566
Q ss_pred hhcccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHH
Q 001580 322 RETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLAN 401 (1050)
Q Consensus 322 ~~~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~ 401 (1050)
++.+.++++++++|.++.++.+.++++++++++.+.+......|+++|.+..........+|..+|.+++++..++.+++
T Consensus 891 ~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~ 970 (1495)
T PLN03232 891 RETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPKSYSPGFYIVVYALLGFGQVAVTFTN 970 (1495)
T ss_pred HhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 77888999999999999887777777777777778888888899999987543222335677888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 402 SYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVST 481 (1050)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1050)
.++....+.+++.++|.+++++++++|+.||+++++|+++||+++|+..++..++..+..++..++.++.+++++.++.+
T Consensus 971 ~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~ 1050 (1495)
T PLN03232 971 SFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVST 1050 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888888888877777777777766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 482 MSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNM 561 (1050)
Q Consensus 482 ~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (1050)
+.++.++|++++++..+.++.+..++.++....+++++++++.|+++|+.+||+|+.++++.+.+.+..+...+..+...
T Consensus 1051 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~ 1130 (1495)
T PLN03232 1051 ISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANT 1130 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677777777777777778888888999999999999999999999999999999999999999888888888888777
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 001580 562 GANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYI 641 (1050)
Q Consensus 562 ~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~ 641 (1050)
..+.|+.+.+..++.+++++++.+.+...+.......+...+|+++.++..+..++..+.+.+...+..+.+++|+.++.
T Consensus 1131 ~~~~wl~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~ 1210 (1495)
T PLN03232 1131 SSNRWLTIRLETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYI 1210 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78889888887777666666665555543333323344566777888888888899999999999999999999999999
Q ss_pred cCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCc
Q 001580 642 ELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER 721 (1050)
Q Consensus 642 ~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~ 721 (1050)
+.|+|.+...+...+++.||..|.|+|+||+|+|+++.+++|+|+||+|+|||++|||||||||||||+++|+|+++|++
T Consensus 1211 ~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~ 1290 (1495)
T PLN03232 1211 DLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEK 1290 (1495)
T ss_pred cCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCC
Confidence 88877543222223344577778899999999997655579999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCC
Q 001580 722 GRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGE 801 (1050)
Q Consensus 722 G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~ 801 (1050)
|+|.+||+|+++++++++|++|+||||+|.+|++|||+||+++.+++|++++++++.++++++++.+|.||||.+|++|.
T Consensus 1291 G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~ 1370 (1495)
T PLN03232 1291 GRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGE 1370 (1495)
T ss_pred ceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEe
Q 001580 802 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 881 (1050)
Q Consensus 802 ~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~ 881 (1050)
+||||||||+||||||+++|+|||||||||+||++|++.|++.|++.++++|+|+||||++++.+||+|+||++|+|+|.
T Consensus 1371 ~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~ 1450 (1495)
T PLN03232 1371 NFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEY 1450 (1495)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred cChhHHhhcCCChHHHHHHhhccchHHHH
Q 001580 882 DTPEELLSNEGSSFSKMVQSTGAANAQYL 910 (1050)
Q Consensus 882 g~~~el~~~~~~~~~~~~~~~~~~~~~~~ 910 (1050)
|+|+||++++++.|+++++.++..+.+.+
T Consensus 1451 Gt~~eLl~~~~~~f~~l~~~~~~~~~~~~ 1479 (1495)
T PLN03232 1451 DSPQELLSRDTSAFFRMVHSTGPANAQYL 1479 (1495)
T ss_pred CCHHHHHhCCCCHHHHHHHHhChhhhHHH
Confidence 99999999877789999987665544433
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5.9e-127 Score=1261.09 Aligned_cols=892 Identities=42% Similarity=0.702 Sum_probs=739.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCC--CCCCCC-CCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLP--NPPLTS-GLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGG 78 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~--~~~~~~-~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~ 78 (1050)
+..++++.++++|++||++||+.++..... .....+ ....|+++|++|+|+. .++++|+|+||++++|++++|+|+
T Consensus 594 ~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~l~~isl~i~~G~~v~IvG~ 672 (1522)
T TIGR00957 594 PMVISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNSITVHNATFTWAR-DLPPTLNGITFSIPEGALVAVVGQ 672 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCCCCcEEEEEeEEEcCC-CCCceeeeeEEEEcCCCEEEEECC
Confidence 567889999999999999999877643211 011111 1136999999999974 245799999999999999999999
Q ss_pred CCCcHHHHHHHHHcCCCCCCCCeeEEeCcEEEEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCc
Q 001580 79 TGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDV 158 (1050)
Q Consensus 79 nGsGKSTLl~~l~G~~~~~~g~~~~~~~~i~~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~ 158 (1050)
||||||||+++|+|+++|++|.+ .+.+.|+||||+||++++||+|||.||.++++++++++++.|++.++++.+|+||+
T Consensus 673 ~GsGKSTLl~~l~g~~~~~~G~i-~~~g~i~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~ 751 (1522)
T TIGR00957 673 VGCGKSSLLSALLAEMDKVEGHV-HMKGSVAYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDR 751 (1522)
T ss_pred CCCCHHHHHHHHhCCCccCCcEE-EECCEEEEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCC
Confidence 99999999999999999998765 46778999999999999999999999988888899999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcc--ccCCcEEEEeccCcchhhhcCEE
Q 001580 159 TEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRG--ELSGKTRVLVTNQLHFLSQVDRI 236 (1050)
Q Consensus 159 t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~--~~~g~t~ilvtH~~~~l~~~d~i 236 (1050)
|.+|++|.+|||||||||+||||||++|+++|||||||+||+++.+++++.+.+. ..+++|+|+|||+++++..||+|
T Consensus 752 t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~i 831 (1522)
T TIGR00957 752 TEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVI 831 (1522)
T ss_pred ceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEE
Confidence 9999999999999999999999999999999999999999999999999988742 34689999999999999999999
Q ss_pred EEEcCCeEeeccChhhhhcChHHHHHHHHHhhhhhhhh--hhc-c---cCccccc----C--C-----CCCCCCC---CC
Q 001580 237 ILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYV--EEK-E---DGETVDN----K--T-----SKPAANG---VD 296 (1050)
Q Consensus 237 ~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~--~~~-~---~~~~~~~----~--~-----~~~~~~~---~~ 296 (1050)
++|++|++++.|+++++.+..+.|..+.......+... ++. . ..+.... . . ....... ..
T Consensus 832 i~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1522)
T TIGR00957 832 IVMSGGKISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASS 911 (1522)
T ss_pred EEecCCeEEeeCCHHHHHhcchhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence 99999999999999999877777777665332111000 000 0 0000000 0 0 0000000 00
Q ss_pred CCCCC---c--cc---cccccccccchhhhhhhhhcccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 001580 297 NDLPK---E--AS---DTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSY 368 (1050)
Q Consensus 297 ~~~~~---~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 368 (1050)
..... . .. ...............+.+..|.+++.+++.|+++.|.. ..+++++++++...+....++|+++
T Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 990 (1522)
T TIGR00957 912 SDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIGLF-ITFLSIFLFVCNHVSALASNYWLSL 990 (1522)
T ss_pred cccccccccccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 00 00000000112234455667888999999999988754 3334444555666777788899999
Q ss_pred hccccccC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHh
Q 001580 369 WTDQSSLK--THGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAK 446 (1050)
Q Consensus 369 ~~~~~~~~--~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~ 446 (1050)
|.+..... .....++..+|.+++++..++.++..++....+.+++.++|+.++++++++|+.||+++++|+++||+++
T Consensus 991 w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~ 1070 (1522)
T TIGR00957 991 WTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSK 1070 (1522)
T ss_pred HhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHH
Confidence 98754211 1223455667888888888888888888889999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHH
Q 001580 447 DLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEA 526 (1050)
Q Consensus 447 D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 526 (1050)
|+..+|..++..+..++..++.++..++++.+..++.+++++|++++++....+|.+..++.++.....++++++++.|+
T Consensus 1071 Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~ 1150 (1522)
T TIGR00957 1071 ELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNET 1150 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999988888888888888777777777777776677777777777777888888999999999999999999999
Q ss_pred HchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHH
Q 001580 527 LNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLL 606 (1050)
Q Consensus 527 l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~ 606 (1050)
++|+.+||+|+.++++.+.+.+..+...+..+.....+.|+.+++++++.+++.+++.+.+...+..+ .+.++++
T Consensus 1151 l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~g~l~~~ 1225 (1522)
T TIGR00957 1151 LLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFAALFAVISRHSLS-----AGLVGLS 1225 (1522)
T ss_pred hCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----HHHHHHH
Confidence 99999999999999999999999999988888877888999998888776665555555544333322 3456778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeee
Q 001580 607 LSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGL 686 (1050)
Q Consensus 607 l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v 686 (1050)
+.|+..+..++..+.+.+...+..+.+++|+.++.+.++|.+...+...+++.||..|.|+|+||+|+|+++.+++|+|+
T Consensus 1226 l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~i 1305 (1522)
T TIGR00957 1226 VSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHI 1305 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccce
Confidence 88888888999999999999999999999999999887765422222334456888889999999999976555799999
Q ss_pred eEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCC
Q 001580 687 SFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE 766 (1050)
Q Consensus 687 s~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~ 766 (1050)
||+|+|||++|||||||||||||+++|+|+++|++|+|.+||+|+++++++++|++|+||||+|.+|++|||+||+++.+
T Consensus 1306 s~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~ 1385 (1522)
T TIGR00957 1306 NVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQ 1385 (1522)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHH
Q 001580 767 HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIR 846 (1050)
Q Consensus 767 ~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~ 846 (1050)
++|++++++++.+++++++.++|.||||.++++|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|+
T Consensus 1386 ~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~ 1465 (1522)
T TIGR00957 1386 YSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIR 1465 (1522)
T ss_pred CCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHhh
Q 001580 847 EEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 902 (1050)
Q Consensus 847 ~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~ 902 (1050)
+.++++|+|+||||++++.+||||+||++|+|+|.|+|+||+++ ++.|.++++++
T Consensus 1466 ~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1466 TQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDA 1520 (1522)
T ss_pred HHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHc
Confidence 99899999999999999999999999999999999999999987 47888887653
No 5
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.4e-126 Score=1153.73 Aligned_cols=877 Identities=26% Similarity=0.358 Sum_probs=653.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCC--C-CCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCC
Q 001580 5 AWQVVNANVSLKRMEEFLLAEEKILLPN--P-PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGE 81 (1050)
Q Consensus 5 i~~~~~a~~s~~Ri~~fl~~~e~~~~~~--~-~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGs 81 (1050)
+..+.+|+++..+|.+.++.....+... . ....-...|+++|++|+||++++.++|+|+||.|++|+.++|||+|||
T Consensus 311 l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGs 390 (1228)
T KOG0055|consen 311 LSAFAKARAAAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGS 390 (1228)
T ss_pred hHHHhccccchHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCC
Confidence 5678899999999999999765443221 1 111223359999999999999988999999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCCC-CHHHHHHHHHHhCcHH
Q 001580 82 GKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSAF-EPARYEKAIDVTSLQH 148 (1050)
Q Consensus 82 GKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~~-~~~~~~~~~~~~~l~~ 148 (1050)
||||++++|.++++|++|.+.. ++.+||.|.|+|.||+.||+|||.+|.+. ..++..++++.++..+
T Consensus 391 GKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~ 470 (1228)
T KOG0055|consen 391 GKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHD 470 (1228)
T ss_pred CHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHH
Confidence 9999999999999999987643 45679999999999999999999999753 4678889999999999
Q ss_pred HHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcc
Q 001580 149 DLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLH 228 (1050)
Q Consensus 149 ~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~ 228 (1050)
.+..+|+|++|.+|++|.+|||||||||||||||+.+|+|||||||||+||+++++.+.+.| +....|+|.|+|+|+++
T Consensus 471 fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~AL-d~~~~grTTivVaHRLS 549 (1228)
T KOG0055|consen 471 FILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEAL-DKASKGRTTIVVAHRLS 549 (1228)
T ss_pred HHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHH-HHhhcCCeEEEEeeehh
Confidence 99999999999999999999999999999999999999999999999999999999887755 55567999999999999
Q ss_pred hhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHHhhhhhhhhh-hcccCcccccCCC-CCCCCCCCCCCC-Ccccc
Q 001580 229 FLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVE-EKEDGETVDNKTS-KPAANGVDNDLP-KEASD 305 (1050)
Q Consensus 229 ~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~ 305 (1050)
.+++||+|++|++|+|++.|+++||.+.++.|..+++.+........ +...........+ ..+........+ .....
T Consensus 550 tIrnaD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~ 629 (1228)
T KOG0055|consen 550 TIRNADKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNL 629 (1228)
T ss_pred hhhccCEEEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCcccccc
Confidence 99999999999999999999999999999999999886543221110 0000000000000 000000000000 00000
Q ss_pred --ccccccccchhhhhhhhhcccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccc-----ccCCC
Q 001580 306 --TRKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQS-----SLKTH 378 (1050)
Q Consensus 306 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~ 378 (1050)
.....+...... .+ +....++..+..+.+ .-++++++..++.++...........++...... .....
T Consensus 630 ~~~~~~~e~~~~~~-~~--~~~~~s~~~i~k~~~--pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~ 704 (1228)
T KOG0055|consen 630 LSVKPEGEDPEEPV-SE--EDEKVSFWRIFKLNK--PEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKR 704 (1228)
T ss_pred cccccccccccccc-cc--ccccccHHHHHHhcc--chhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHH
Confidence 000000000000 00 001222222222221 1233333444444443333332222222211111 11111
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcc--cChhHHHHHHHhhHHHHHHHHH
Q 001580 379 GPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHT--NPLGRIINRFAKDLGDIDRNVA 456 (1050)
Q Consensus 379 ~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~l~~rl~~D~~~i~~~~~ 456 (1050)
....|.++|..+++...+..+++.+++.+.+.+...++|..+|++++++++.|||. |+ |.+.+|+.+|..++...+.
T Consensus 705 ~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~ 783 (1228)
T KOG0055|consen 705 EVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVG 783 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHH
Confidence 23347888999999999999999999999999999999999999999999999984 66 9999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccchHHHHHHHHchHHH
Q 001580 457 VFVNMFMGQVSQLLSTFVLIGIVSTMSLW---AIMPLLLLFYAAYLYYQ-STAREVKRLDSITRSPVYAQFGEALNGLST 532 (1050)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ 532 (1050)
..+..++..+..++..+++.++.+|-..+ ++.|++.+....+..+. ....+.+. ..........|++.+++|
T Consensus 784 ~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~----~~~ea~~iA~eai~NIrT 859 (1228)
T KOG0055|consen 784 DRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKK----AYEEASKIAIEAVSNIRT 859 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH----HHHHHHHHHHHHHHhHHH
Confidence 88888888888877777777766664433 34455444433333222 22222221 122334567899999999
Q ss_pred HHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhH-HH---HHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHH
Q 001580 533 IRAYKAYDRMADINGKSMDKNIRYTLVNMGANR-WL---AIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLS 608 (1050)
Q Consensus 533 Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~ 608 (1050)
|++|..++++.+.+.+..+...+.......... .+ ...+.+..++.+|+++. ++..+..+....|.....+.++
T Consensus 860 V~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~--Li~~g~~~~~~~~~vf~~l~~t 937 (1228)
T KOG0055|consen 860 VAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGAR--LISNGEMTFEDVFRVFMALSFT 937 (1228)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH--HHhcCCcCHHHHHHHHHHHHHH
Confidence 999999999999999888776665544332211 11 11122223333333322 2334444444444333322221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCC-CCCceeeee
Q 001580 609 YALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLS 687 (1050)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~vs 687 (1050)
...+............+..|+.++.++++.++.-+...+. .....+..|.|+++||+|+||.+ ..++|+|+|
T Consensus 938 -----a~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~--~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~ 1010 (1228)
T KOG0055|consen 938 -----AMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTS--GGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLS 1010 (1228)
T ss_pred -----HHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCC--CCccccceeEEEEeeeEeeCCCCCCchhhcCCc
Confidence 1112222223334456677888999998866532211111 11122356889999999999743 247999999
Q ss_pred EEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCC-C
Q 001580 688 FTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-E 766 (1050)
Q Consensus 688 ~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~-~ 766 (1050)
|+|++|+.+||||||||||||++.+|.|+|+|++|.|.+||.|+++++++++|++||+|+|+|.||++||||||.++. +
T Consensus 1011 l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~ 1090 (1228)
T KOG0055|consen 1011 LSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEE 1090 (1228)
T ss_pred EEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999883 4
Q ss_pred CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHH
Q 001580 767 HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIR 846 (1050)
Q Consensus 767 ~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~ 846 (1050)
.+.+++.+|++.+++++||..+|+||||.+||+|.+||||||||||||||++|||+||||||+||+||.++++.++++|+
T Consensus 1091 vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd 1170 (1228)
T KOG0055|consen 1091 VSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALD 1170 (1228)
T ss_pred CCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHhh
Q 001580 847 EEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 902 (1050)
Q Consensus 847 ~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~ 902 (1050)
+...|+|+|+|+||++++++||.|+|+++|+|+|+|||++|+++ ++.|.++++.+
T Consensus 1171 ~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~~-~G~Y~~Lv~~q 1225 (1228)
T KOG0055|consen 1171 RAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQGTHDELLAK-RGIYFRLVQLQ 1225 (1228)
T ss_pred HhhcCCcEEEEecchhhhhcCCEEEEEECCEEEecccHHHHHhC-CCchHHHhhhc
Confidence 99999999999999999999999999999999999999999994 67888888653
No 6
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.7e-122 Score=1210.64 Aligned_cols=893 Identities=30% Similarity=0.535 Sum_probs=722.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCC---------------------------
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSK--------------------------- 54 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~--------------------------- 54 (1050)
|.++..+.++.+|++||++||..+|....+. ......++++|++|+|+..
T Consensus 356 p~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~---~~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (1490)
T TIGR01271 356 PGAIQTWYDSLGAITKIQDFLCKEEYKTLEY---NLTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFS 432 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccccccc---cCCCCceEEecceEecCCcccccccccccccccccccccccccccc
Confidence 4567777789999999999999887432111 1112359999999999631
Q ss_pred ----CCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEEeCcEEEEecCCCCCcccHHHHhccCC
Q 001580 55 ----AERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGS 130 (1050)
Q Consensus 55 ----~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~~~~i~~v~Q~~~l~~~TV~eni~~g~ 130 (1050)
..+++|+|+||+|++|++++|+|||||||||||++|+|+++|++|.+. +.+.|+||+|+||++++||+|||.||.
T Consensus 433 ~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~~~~~G~i~-~~g~iayv~Q~~~l~~~Ti~eNI~~g~ 511 (1490)
T TIGR01271 433 NFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGELEPSEGKIK-HSGRISFSPQTSWIMPGTIKDNIIFGL 511 (1490)
T ss_pred ccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE-ECCEEEEEeCCCccCCccHHHHHHhcc
Confidence 024689999999999999999999999999999999999999987654 677899999999999999999999998
Q ss_pred CCCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHH
Q 001580 131 AFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRC 210 (1050)
Q Consensus 131 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l 210 (1050)
.++.+++.++++.|++.++++.+|.||.|.+|++|.+|||||||||+||||||.+|++|||||||++||+.+++++++.+
T Consensus 512 ~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~ 591 (1490)
T TIGR01271 512 SYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESC 591 (1490)
T ss_pred ccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 77778888999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred HccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHHhhhhhh------------------
Q 001580 211 IRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEE------------------ 272 (1050)
Q Consensus 211 ~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~------------------ 272 (1050)
+....+|+|+|+|||+++++..||+|++|++|++++.|+++++....+.|...........+
T Consensus 592 l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 671 (1490)
T TIGR01271 592 LCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVS 671 (1490)
T ss_pred HHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHhcChHHHHHHhccccccccccccccccccccccccc
Confidence 54444689999999999999999999999999999999999998765555554421100000
Q ss_pred hh--------h-hc------ccCcccc--------cC--------------------C-C----CCCCCC---------C
Q 001580 273 YV--------E-EK------EDGETVD--------NK--------------------T-S----KPAANG---------V 295 (1050)
Q Consensus 273 ~~--------~-~~------~~~~~~~--------~~--------------------~-~----~~~~~~---------~ 295 (1050)
.. + +. +...... +. . . .+.... .
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1490)
T TIGR01271 672 IDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQG 751 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhccccccccccccccccc
Confidence 00 0 00 0000000 00 0 0 000000 0
Q ss_pred CCCCC-----------------------Ccc------c-----ccc--------------------c-cccc--------
Q 001580 296 DNDLP-----------------------KEA------S-----DTR--------------------K-TKEG-------- 312 (1050)
Q Consensus 296 ~~~~~-----------------------~~~------~-----~~~--------------------~-~~~~-------- 312 (1050)
....+ ... . ..+ . ..++
T Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 831 (1490)
T TIGR01271 752 EESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEI 831 (1490)
T ss_pred ccccccccccccccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00000 000 0 000 0 0000
Q ss_pred -----cchhhhhhhhhcccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccc-------cc-C---
Q 001580 313 -----KSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQS-------SL-K--- 376 (1050)
Q Consensus 313 -----~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~-~--- 376 (1050)
.......+++..|.++|++|++|+++.|+++.++++++++++.+.+.....+|+..|.... .. .
T Consensus 832 ~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~ 911 (1490)
T TIGR01271 832 NEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSP 911 (1490)
T ss_pred hhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCc
Confidence 0011233455667889999999999887666556666666777888888899998886421 00 0
Q ss_pred --------CCChhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhh
Q 001580 377 --------THGPLFY-NTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKD 447 (1050)
Q Consensus 377 --------~~~~~~~-~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D 447 (1050)
.....+| .++|..+.++..++.+++.+++...+.+++.++|..+++++++.|+.||++++.|+++|||++|
T Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~D 991 (1490)
T TIGR01271 912 DVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKD 991 (1490)
T ss_pred cccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHH
Confidence 0011222 4445555555667778888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHH
Q 001580 448 LGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEAL 527 (1050)
Q Consensus 448 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l 527 (1050)
+..+|..++..+..++..++.++..++++++..++..++++|++++++....+|.+..++.++....+++++++++.|++
T Consensus 992 i~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl 1071 (1490)
T TIGR01271 992 MAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSL 1071 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh
Confidence 99999999888888888878888777777777777777777777777777778888889999999999999999999999
Q ss_pred chHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHH
Q 001580 528 NGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLL 607 (1050)
Q Consensus 528 ~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l 607 (1050)
+|+.+||+|+.++++.+.+.+..+...+..+......+|+.+++.+++.++...++.+.+... .. ....+|+++
T Consensus 1072 ~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-~~-----~~g~~g~~l 1145 (1490)
T TIGR01271 1072 KGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-QD-----GEGEVGIIL 1145 (1490)
T ss_pred cCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-----CccHHHHHH
Confidence 999999999999999999999888777777777777889988887766554443333322211 11 123467777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccC--------------CCCCCCCCCCCccEEEEEEEE
Q 001580 608 SYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIE--------------SNRPPPGWPSSGSIKFEDVVL 673 (1050)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~--------------~~~~~~~~~~~~~i~~~~v~~ 673 (1050)
+++..+..++..+.+.+..++..+.+++|+.++.+.|+|.+...+ ...+++.||..|.|+|+||+|
T Consensus 1146 ~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~ 1225 (1490)
T TIGR01271 1146 TLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTA 1225 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEE
Confidence 788888888888888888999999999999999988776432111 112234688888999999999
Q ss_pred EeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccc
Q 001580 674 RYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLF 753 (1050)
Q Consensus 674 ~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf 753 (1050)
+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++ ++|+|.+||+|+.+++.+.+|++|+||||+|.+|
T Consensus 1226 ~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF 1304 (1490)
T TIGR01271 1226 KYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIF 1304 (1490)
T ss_pred EeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccC
Confidence 998655689999999999999999999999999999999999997 7999999999999999999999999999999999
Q ss_pred cccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCC
Q 001580 754 SGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAV 833 (1050)
Q Consensus 754 ~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~L 833 (1050)
++|||+||+++..++|++++++++.+++.+++..+|.||||.++++|.+|||||||||||||||+++|+|||||||||+|
T Consensus 1305 ~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~l 1384 (1490)
T TIGR01271 1305 SGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHL 1384 (1490)
T ss_pred ccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccC
Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHhhccch
Q 001580 834 DVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTGAAN 906 (1050)
Q Consensus 834 D~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~~~ 906 (1050)
|++|++.|++.|++.++++|||+||||++++..||+|+||++|+|++.|+|++|+++ ++.|+.+++......
T Consensus 1385 D~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~-~~~f~~l~~~~~~~~ 1456 (1490)
T TIGR01271 1385 DPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE-TSLFKQAMSAADRLK 1456 (1490)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC-CcHHHHHHHHhChhc
Confidence 999999999999999899999999999999999999999999999999999999974 678999988765543
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5e-122 Score=1210.24 Aligned_cols=839 Identities=36% Similarity=0.606 Sum_probs=683.6
Q ss_pred CCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEEeCcEEEEecCCCCCcccHHHHhccCCCCCHHH
Q 001580 57 RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFNATVRDNILFGSAFEPAR 136 (1050)
Q Consensus 57 ~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~~~~i~~v~Q~~~l~~~TV~eni~~g~~~~~~~ 136 (1050)
+++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+. .++.||||||+||++++||+|||.|+.+.+.++
T Consensus 673 ~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~-~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~ 751 (1560)
T PTZ00243 673 KVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVW-AERSIAYVPQQAWIMNATVRGNILFFDEEDAAR 751 (1560)
T ss_pred ceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEE-ECCeEEEEeCCCccCCCcHHHHHHcCChhhHHH
Confidence 5689999999999999999999999999999999999999987754 567899999999999999999999987767778
Q ss_pred HHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC
Q 001580 137 YEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS 216 (1050)
Q Consensus 137 ~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~ 216 (1050)
+.++++.|++.++++.+|+|+.|.+|++|.+|||||||||+|||||+.+|++|||||||++||+.+.+++++.++....+
T Consensus 752 ~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~ 831 (1560)
T PTZ00243 752 LADAVRVSQLEADLAQLGGGLETEIGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALA 831 (1560)
T ss_pred HHHHHHHhhhHHHHHHhhccchHHhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999876644446
Q ss_pred CcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHHhhhhhhhhhhcccCc--ccccCCCCCCCCC
Q 001580 217 GKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGE--TVDNKTSKPAANG 294 (1050)
Q Consensus 217 g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 294 (1050)
|+|+|+|||+++++..+|+|++|++|++++.|+++++.+.+ .|..+........+..+.....+ .............
T Consensus 832 ~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1560)
T PTZ00243 832 GKTRVLATHQVHVVPRADYVVALGDGRVEFSGSSADFMRTS-LYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHE 910 (1560)
T ss_pred CCEEEEEeCCHHHHHhCCEEEEEECCEEEEecCHHHHHhCh-HHHHHHHhhccccccccccccccccccccccccccccc
Confidence 89999999999999999999999999999999999988654 45555432111000000000000 0000000000000
Q ss_pred CCCCCCCc--cccc-cccccccchhhhhhhhhcccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhcc
Q 001580 295 VDNDLPKE--ASDT-RKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTD 371 (1050)
Q Consensus 295 ~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 371 (1050)
........ .... .........+...+.+..+.++|.+|++|+...|+....+++++++++++.+......|++.|.+
T Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~ 990 (1560)
T PTZ00243 911 PPVAKQEGNAEGGDGAALDAAAGRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWST 990 (1560)
T ss_pred ccccccccccccccccccccccchhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 00000000 0000 00000011223344556788899999999999887766666666667777888888899999986
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHH
Q 001580 372 QSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDI 451 (1050)
Q Consensus 372 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i 451 (1050)
.... .....|+.+|.++.++.++..+++.+.......+.+.++|..+++++++.|+.||++++.|+++||+++|+..+
T Consensus 991 ~~~~--~~~~~~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~i 1068 (1560)
T PTZ00243 991 RSFK--LSAATYLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDIL 1068 (1560)
T ss_pred cccC--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHH
Confidence 4321 22344566677666666666677777777777788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHH
Q 001580 452 DRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLS 531 (1050)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ 531 (1050)
+..++..+..++..++.+++.++++.+..++.+++++|++++++.+..+|.+..++.++......+++++++.|+++|+.
T Consensus 1069 d~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~ 1148 (1560)
T PTZ00243 1069 DNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSA 1148 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHH
Confidence 99988877777777777777777777777766666666666666666778888899999999999999999999999999
Q ss_pred HHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh----cCccchhhhHHHHHHHHH
Q 001580 532 TIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQ----NGSAENQEAFASTMGLLL 607 (1050)
Q Consensus 532 ~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~----~~~~~~~~~~~~~~g~~l 607 (1050)
+||+|+.++.+.+.+.+..+...+..+.....+.|+.+++.++..++..+++.+.+.. .+.. -.+.+++++
T Consensus 1149 tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~g~l~~~l 1223 (1560)
T PTZ00243 1149 TITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQ-----EIGLVSLSL 1223 (1560)
T ss_pred HHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-----CHHHHHHHH
Confidence 9999999999999999998888888877777888999888877665544333332211 1111 134567777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-CCCCcccc-----------------------CCCCCC---CCC
Q 001580 608 SYALNITSLLTAVLRLASLAENSLNAVERVGNYIEL-PSEAPLVI-----------------------ESNRPP---PGW 660 (1050)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~-~~e~~~~~-----------------------~~~~~~---~~~ 660 (1050)
.++..+..++..+.+.+..++..+.+++|+.++++. |+++.... +...++ +.|
T Consensus 1224 ~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1303 (1560)
T PTZ00243 1224 TMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHP 1303 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCC
Confidence 788888889999999999999999999999999863 33221000 000111 123
Q ss_pred CCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHh
Q 001580 661 PSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLR 740 (1050)
Q Consensus 661 ~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r 740 (1050)
+..|.|+|+||+|+|+++.+++|+||||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|
T Consensus 1304 ~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR 1383 (1560)
T PTZ00243 1304 VQAGSLVFEGVQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELR 1383 (1560)
T ss_pred CCCCeEEEEEEEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHH
Confidence 44578999999999976655799999999999999999999999999999999999999999999999999999999999
Q ss_pred hheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 741 KILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 741 ~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
++|+||||+|.||++|||+||+++.+.+|++++++++.+++++++..+|.||||.+|++|.+|||||||||||||||+++
T Consensus 1384 ~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~ 1463 (1560)
T PTZ00243 1384 RQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKK 1463 (1560)
T ss_pred hcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999995
Q ss_pred -CCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHH
Q 001580 821 -SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMV 899 (1050)
Q Consensus 821 -p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 899 (1050)
|+|||||||||+||+++++.|++.|++.++++|+|+||||++++.+||+|+||++|+|++.|+|+||+++.++.|+.++
T Consensus 1464 ~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~ 1543 (1560)
T PTZ00243 1464 GSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMV 1543 (1560)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHH
Confidence 8999999999999999999999999998899999999999999999999999999999999999999987778899988
Q ss_pred Hhhcc
Q 001580 900 QSTGA 904 (1050)
Q Consensus 900 ~~~~~ 904 (1050)
+..+.
T Consensus 1544 ~~~~~ 1548 (1560)
T PTZ00243 1544 EALGR 1548 (1560)
T ss_pred HHhCh
Confidence 76543
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.9e-112 Score=1108.85 Aligned_cols=889 Identities=20% Similarity=0.291 Sum_probs=631.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCC-CCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCc
Q 001580 4 VAWQVVNANVSLKRMEEFLLAEEKILLP-NPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 82 (1050)
Q Consensus 4 ~i~~~~~a~~s~~Ri~~fl~~~e~~~~~-~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsG 82 (1050)
.+..+..|.+|.+||.++++.++..... .....+....|+++|++|+|+.++++++|+|+||+|++|+++||||+||||
T Consensus 344 ~~~~~~~a~~a~~ri~~ii~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsG 423 (1466)
T PTZ00265 344 NITEYMKSLEATNSLYEIINRKPLVENNDDGKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCG 423 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCC
Confidence 4567889999999999999876532211 111111123599999999998654567999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeeEE-------------eCcEEEEecCCCCCcccHHHHhccCCC------------------
Q 001580 83 KTSLISAMLGELPPVSDASAVI-------------RGTVAYVPQVSWIFNATVRDNILFGSA------------------ 131 (1050)
Q Consensus 83 KSTLl~~l~G~~~~~~g~~~~~-------------~~~i~~v~Q~~~l~~~TV~eni~~g~~------------------ 131 (1050)
||||+++|+|+++|++|.+..- ++.||||+|+|.+|+.||+|||.+|..
T Consensus 424 KSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~ 503 (1466)
T PTZ00265 424 KSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGND 503 (1466)
T ss_pred HHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcccccccccc
Confidence 9999999999999998876541 235999999999999999999998741
Q ss_pred ----------------------------------------CCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHH
Q 001580 132 ----------------------------------------FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 171 (1050)
Q Consensus 132 ----------------------------------------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGG 171 (1050)
...+++..+++.+++.+.+..+|.|++|.+|++|.+||||
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGG 583 (1466)
T PTZ00265 504 SQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGG 583 (1466)
T ss_pred ccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHH
Confidence 1234566778888999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhhcCEEEEEcCC--------
Q 001580 172 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEG-------- 242 (1050)
Q Consensus 172 qrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~~d~i~~l~~G-------- 242 (1050)
|||||+|||||+++|+|||||||||+||+.+++.+.+.+.+... +|+|+|+|||+++.+..||+|++|++|
T Consensus 584 QkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~ 663 (1466)
T PTZ00265 584 QKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDV 663 (1466)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccc
Confidence 99999999999999999999999999999999999998876543 589999999999999999999999986
Q ss_pred ---------------------------------------eEeeccChhhhhc-ChHHHHHHHHHhhhhhhhhh-hc-ccC
Q 001580 243 ---------------------------------------MVKEEGTFEDLSN-NGELFQKLMENAGKMEEYVE-EK-EDG 280 (1050)
Q Consensus 243 ---------------------------------------~i~~~g~~~~l~~-~~~~~~~l~~~~~~~~~~~~-~~-~~~ 280 (1050)
+|+++|++++++. ..+.|..++..+........ +. ...
T Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~ 743 (1466)
T PTZ00265 664 DIIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKD 743 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccc
Confidence 5999999999997 57889888866532211100 00 000
Q ss_pred c--ccccCC-CC-CC-CCCC-----CCCCC-C--ccccc--c--ccccc--cchhhhhh-hhhc-ccccHHHHHHHHHHh
Q 001580 281 E--TVDNKT-SK-PA-ANGV-----DNDLP-K--EASDT--R--KTKEG--KSVLIKQE-ERET-GVVSFKVLSRYKDAL 339 (1050)
Q Consensus 281 ~--~~~~~~-~~-~~-~~~~-----~~~~~-~--~~~~~--~--~~~~~--~~~~~~~~-~~~~-~~~~~~~~~~y~~~~ 339 (1050)
. ...... .. .. .... ..... . ..... . ..... +....... .+.. ....+..+.++....
T Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 823 (1466)
T PTZ00265 744 SDMKSSAYKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSY 823 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHH
Confidence 0 000000 00 00 0000 00000 0 00000 0 00000 00000000 0000 000111111111111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccC---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 340 GGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLK---THGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRL 416 (1050)
Q Consensus 340 g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l 416 (1050)
.+.+++.+++.++...+....+..++.+++..... ......+.+++++++++..++.++..++....+.+...++
T Consensus 824 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~l 901 (1466)
T PTZ00265 824 --KKDVTIIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTM 901 (1466)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11133333344444444444444444443322111 1112345556666777788888999999999999999999
Q ss_pred HHHHHHHHHcCCchhhcc--cChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 417 HDAMLHSILRAPMVFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLF 494 (1050)
Q Consensus 417 ~~~l~~~ll~~p~~ff~~--~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~ 494 (1050)
|..+|++++++|+.||++ +++|++++|+++|+..+...+...+..++..++.++..+++++++++...++++++++++
T Consensus 902 R~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~ 981 (1466)
T PTZ00265 902 KRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIF 981 (1466)
T ss_pred HHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999985 889999999999999999877766666666666666666666666665544444333222
Q ss_pred HHHHHHHHHH--HHHHHHH-------------HHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Q 001580 495 YAAYLYYQST--AREVKRL-------------DSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLV 559 (1050)
Q Consensus 495 ~~~~~~~~~~--~~~~~~~-------------~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~ 559 (1050)
...+....+. .++.++. .....+.....+.|+++|+++||+|+.++++.+.+.+..+...+....
T Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~ 1061 (1466)
T PTZ00265 982 MRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKR 1061 (1466)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 1111111010 0111111 111133456788899999999999999999888887777655544433
Q ss_pred HHHHhHHHHHHH----HHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 560 NMGANRWLAIRL----EIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVE 635 (1050)
Q Consensus 560 ~~~~~~~~~~~~----~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 635 (1050)
......+..... .+...+++|+++ +.+. .+.++....+... .++.....++..+.......+.+..+.+
T Consensus 1062 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~-~lv~-~g~it~g~l~~~~-----~~~~~~~~~~~~l~~~~~~~~~a~~a~~ 1134 (1466)
T PTZ00265 1062 KTLVNSMLWGFSQSAQLFINSFAYWFGS-FLIR-RGTILVDDFMKSL-----FTFLFTGSYAGKLMSLKGDSENAKLSFE 1134 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-cCCCCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222111111 122222233333 2222 3333322222111 1111122234455566677788899999
Q ss_pred HHHhhhcCCCCCccccCCCCCC-CCCCCCccEEEEEEEEEeCCC-CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHH
Q 001580 636 RVGNYIELPSEAPLVIESNRPP-PGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTL 713 (1050)
Q Consensus 636 R~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~i~~~~v~~~y~~~-~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l 713 (1050)
|+.++++.+++.+......... ......+.|+|+||+|+|+++ ..++|+|+||+|+||+++|||||||||||||+++|
T Consensus 1135 ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL 1214 (1466)
T PTZ00265 1135 KYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLL 1214 (1466)
T ss_pred HHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 9999997654321111111100 011234679999999999743 24799999999999999999999999999999999
Q ss_pred hccccC------------------------------------------------------CccEEEECCeecCCCChHHH
Q 001580 714 FRIVEL------------------------------------------------------ERGRILIDGFDIAKFGLMDL 739 (1050)
Q Consensus 714 ~g~~~p------------------------------------------------------~~G~i~~~g~~i~~~~~~~~ 739 (1050)
+|+|+| ++|+|++||+|+++++..++
T Consensus 1215 ~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~l 1294 (1466)
T PTZ00265 1215 MRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDL 1294 (1466)
T ss_pred HHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHH
Confidence 999999 69999999999999999999
Q ss_pred hhheEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHc
Q 001580 740 RKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 818 (1050)
Q Consensus 740 r~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall 818 (1050)
|++||||||+|.||++||+|||.++. +.+++++++|++.+++++||..+|.||||.+|++|.+|||||||||||||||+
T Consensus 1295 R~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALl 1374 (1466)
T PTZ00265 1295 RNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALL 1374 (1466)
T ss_pred HhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999875 46899999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhhcCEEEEEeC----CEEE-EecChhHHhhcC
Q 001580 819 RRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDS----GRVL-EYDTPEELLSNE 891 (1050)
Q Consensus 819 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~----G~i~-~~g~~~el~~~~ 891 (1050)
++|+|||||||||+||+++++.|+++|++.. +++|+|+||||+++++.||+|+||++ |+++ +.|+|+||+++.
T Consensus 1375 r~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~ 1454 (1466)
T PTZ00265 1375 REPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQ 1454 (1466)
T ss_pred cCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcC
Confidence 9999999999999999999999999999874 68999999999999999999999999 9955 899999999855
Q ss_pred CChHHHHHHh
Q 001580 892 GSSFSKMVQS 901 (1050)
Q Consensus 892 ~~~~~~~~~~ 901 (1050)
++.|.++++.
T Consensus 1455 ~g~Y~~l~~~ 1464 (1466)
T PTZ00265 1455 DGVYKKYVKL 1464 (1466)
T ss_pred CChHHHHHhh
Confidence 6788887754
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.1e-81 Score=724.13 Aligned_cols=546 Identities=27% Similarity=0.369 Sum_probs=441.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcccccc-CCCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 344 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSL-KTHGP--LFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAM 420 (1050)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~--~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 420 (1050)
.+...++++++........|.++...+|.... ..... .-...++.++.++..++++++.+++...+.+...++|..+
T Consensus 148 ~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv~~rlR~~l 227 (716)
T KOG0058|consen 148 WLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGERVVARLRTDL 227 (716)
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555555566666666555544332 11111 1223455667778899999999999999999999999999
Q ss_pred HHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 421 LHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLY 500 (1050)
Q Consensus 421 ~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~ 500 (1050)
|++++++.+.|||.+.+|++++|+++|+..+.+.++..++..+....+.+..+.++++++|-...+.+..+++...+..+
T Consensus 228 F~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i~~P~v~~~~~~ 307 (716)
T KOG0058|consen 228 FRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLIVVPIVALVAKI 307 (716)
T ss_pred HHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHHHhcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998886665555555555666667
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHH
Q 001580 501 YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGAN---RWLAIRLEIVGGL 577 (1050)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 577 (1050)
|.+..++..+..+.+-++..+...|.+++++|+|+|.+|.+..+.+.+..+...+......... .|..-....+..+
T Consensus 308 yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~~~~~~~~~~ 387 (716)
T KOG0058|consen 308 YGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGSTNLLGNLAVL 387 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHHHHHHhHHHH
Confidence 7777777777777777778888999999999999999998887777777666555443332222 1221111111122
Q ss_pred HHHHHHHHHHHhcCccchhhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCC
Q 001580 578 MIWLTATFAVVQNGSAENQEAFASTMGLLLS---YALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESN 654 (1050)
Q Consensus 578 ~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~---~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~ 654 (1050)
.+++.+...+. .+. ++.|.+++ |...+...+..+...++.+.+...|.+|+.++++..+.-+.. .
T Consensus 388 siL~~Gg~Lv~-~g~--------mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~---G 455 (716)
T KOG0058|consen 388 SILFYGGHLVL-TGS--------LTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT---G 455 (716)
T ss_pred HHHHhccchhh-cCc--------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC---C
Confidence 22222222222 122 23344444 444556666777777788888889999999999876553321 1
Q ss_pred CCCCCCCCCccEEEEEEEEEeCCC-CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC
Q 001580 655 RPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK 733 (1050)
Q Consensus 655 ~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~ 733 (1050)
...|. ...|.|+|+||+|+|+.+ ..++|+|+||+|+|||+||+|||||+||||++++|.++|+|++|+|.+||+||++
T Consensus 456 ~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~ 534 (716)
T KOG0058|consen 456 TLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISD 534 (716)
T ss_pred ccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhh
Confidence 11122 456889999999999744 3479999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHhhheEEEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 001580 734 FGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 734 ~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~ 812 (1050)
+++..+|++||+|.|+|.||++||+|||.++.+ .+++++..+++.+++++||..+|+||+|.|||+|.+||||||||||
T Consensus 535 ~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIA 614 (716)
T KOG0058|consen 535 INHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIA 614 (716)
T ss_pred cCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHH
Confidence 999999999999999999999999999997754 5899999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCC
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEG 892 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~ 892 (1050)
|||||++||.||||||+||+||.++|..++++|.+..+++|||+|+||++++++||+|+|+++|+|+|.|+|+||+++.+
T Consensus 615 IARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~ 694 (716)
T KOG0058|consen 615 IARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPN 694 (716)
T ss_pred HHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ChHHHHHHhh
Q 001580 893 SSFSKMVQST 902 (1050)
Q Consensus 893 ~~~~~~~~~~ 902 (1050)
+.|.++++..
T Consensus 695 gly~~Lv~~q 704 (716)
T KOG0058|consen 695 GLYAKLVQRQ 704 (716)
T ss_pred cHHHHHHHHh
Confidence 8999888753
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.2e-75 Score=707.43 Aligned_cols=543 Identities=29% Similarity=0.436 Sum_probs=446.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 344 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYN--TIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 421 (1050)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 421 (1050)
.++-+++..++.+.+....|.+....+|............. ..+.+..+...++.+++.++....+.+....+..+++
T Consensus 155 ~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~ 234 (709)
T COG2274 155 LLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFF 234 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 44455566667777888888888888888766554433332 3344556678899999999999999999999999999
Q ss_pred HHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 422 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 501 (1050)
Q Consensus 422 ~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~ 501 (1050)
+|++++|+.||.++++|++++|+ ++++.|..++...+...+..+...+..++++++.++...|+.+..++++......+
T Consensus 235 ~hll~Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~ 313 (709)
T COG2274 235 RHLLRLPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIF 313 (709)
T ss_pred HHHHcCcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 57888888777766666666666666666666666666665555555555555555
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHH----HHHHHHHhHHHHHHHHHHHHH
Q 001580 502 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRY----TLVNMGANRWLAIRLEIVGGL 577 (1050)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l 577 (1050)
.+..++..+......+...+.+.|++.|+.++|+.+.|.++...+.+......+. .......+.+.++...+...+
T Consensus 314 ~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~ 393 (709)
T COG2274 314 QPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVL 393 (709)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555554444455556677899999999999999999998877777666655544 444445555555555666666
Q ss_pred HHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCC
Q 001580 578 MIWLTATFAVVQNGSAENQEAFASTMGLLLSYAL---NITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESN 654 (1050)
Q Consensus 578 ~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~---~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~ 654 (1050)
++|+++...+-. ..++|.+++|.+ ++..++..+...+..++....+.+|+.++++.|+|.+...
T Consensus 394 iL~~G~~lVl~~----------~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~--- 460 (709)
T COG2274 394 ILWFGAILVLEG----------ELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK--- 460 (709)
T ss_pred HHHHHHHHHhcC----------CcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc---
Confidence 666666554432 234555555443 4566777777888888999999999999999988753211
Q ss_pred CCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCC
Q 001580 655 RPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF 734 (1050)
Q Consensus 655 ~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~ 734 (1050)
.....++..|.|+++||+|+|+++.+++|+|+|++|+|||++||||+||||||||+|+|+|+|+|++|+|++||.|+.++
T Consensus 461 ~~~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i 540 (709)
T COG2274 461 TLIHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDI 540 (709)
T ss_pred ccccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhc
Confidence 12233456788999999999987766899999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHhhheEEEcCCcccccccHHHhcccCCCC-CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 001580 735 GLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEH-SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 735 ~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~-~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~l 813 (1050)
++..+|++|||||||+.+|++||+||+.++.+. +++++.++++.++++++|.++|.||+|.+||+|.+|||||||||+|
T Consensus 541 ~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlal 620 (709)
T COG2274 541 DLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLAL 620 (709)
T ss_pred CHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHH
Confidence 999999999999999999999999999987654 6799999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCC
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGS 893 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~ 893 (1050)
||||+++|+|||||||||+||+++++.|.+.|.+...++|+|+||||+++++.||||+||++|+|+++|+|+|+++. ++
T Consensus 621 ARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g 699 (709)
T COG2274 621 ARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GG 699 (709)
T ss_pred HHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cC
Confidence 99999999999999999999999999999999999899999999999999999999999999999999999999998 66
Q ss_pred hHHHHHHh
Q 001580 894 SFSKMVQS 901 (1050)
Q Consensus 894 ~~~~~~~~ 901 (1050)
.|.++++.
T Consensus 700 ~y~~l~~~ 707 (709)
T COG2274 700 LYARLYQQ 707 (709)
T ss_pred hHHHHHhc
Confidence 78777653
No 11
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.5e-71 Score=676.47 Aligned_cols=549 Identities=20% Similarity=0.260 Sum_probs=406.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhccccccCC-C-C-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 345 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKT-H-G-PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 421 (1050)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~-~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 421 (1050)
+++.+++.++...+....|..+....|...... . . ...+..++.++.+...++.+.+.++....+.+...++|..+|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 103 (588)
T PRK11174 24 LNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAGQHIRQQIRQQVL 103 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444445555555556666655555321111 1 1 112233344455567777888888889999999999999999
Q ss_pred HHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 422 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 501 (1050)
Q Consensus 422 ~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~ 501 (1050)
+++++.|..+|+++++|++++|+++|+..+...+...+..++..++.++..+++++.+++...++++..+++.+.....+
T Consensus 104 ~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~ 183 (588)
T PRK11174 104 DKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLGTAPLIPLFMALV 183 (588)
T ss_pred HHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998877666666666666665555555555544433333333322333333
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-
Q 001580 502 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIW- 580 (1050)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 580 (1050)
.+..+...+......+.+.+.+.|.++|+++||+|+.++++.+.+.+..+...+..........+......++..+...
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (588)
T PRK11174 184 GMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSAVLEFFASISIAL 263 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444445567788899999999999999999998887776666555444333222222222222222211111
Q ss_pred --HHHHHHHHhcCccchhh---hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCC
Q 001580 581 --LTATFAVVQNGSAENQE---AFA-STMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESN 654 (1050)
Q Consensus 581 --~~~~~~v~~~~~~~~~~---~~~-~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~ 654 (1050)
+.+.+.+. +..+... .+. ......+.+...+..++..+............+.+|+.++++.+++.+.. ..
T Consensus 264 ~~~~~~~~~~--g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~--~~ 339 (588)
T PRK11174 264 VAVYFGFSYL--GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLETPLAHPQQ--GE 339 (588)
T ss_pred HHHHHHHHHh--cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCC--Cc
Confidence 11111111 2211110 011 11111123334556677777777778888899999999999876542211 11
Q ss_pred CCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCC
Q 001580 655 RPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF 734 (1050)
Q Consensus 655 ~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~ 734 (1050)
...+ .+..+.|+++||+|.|.++ +++|+|+||+|+||+++||+||||||||||+++|+|+| |++|+|.+||+|+.++
T Consensus 340 ~~~~-~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~ 416 (588)
T PRK11174 340 KELA-SNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELREL 416 (588)
T ss_pred cccC-CCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccC
Confidence 0001 0123469999999877544 47999999999999999999999999999999999999 9999999999999999
Q ss_pred ChHHHhhheEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 001580 735 GLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 735 ~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~l 813 (1050)
++.++|++|+||||+|.+|++||+|||.++. +.++++++++++.++++++++++|+|++|.+|++|.+|||||||||+|
T Consensus 417 ~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRial 496 (588)
T PRK11174 417 DPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLAL 496 (588)
T ss_pred CHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999874 478999999999999999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCC
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGS 893 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~ 893 (1050)
|||++++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|++++.|+|+||+++. +
T Consensus 497 ARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~~~eL~~~~-~ 575 (588)
T PRK11174 497 ARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGDYAELSQAG-G 575 (588)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCCHHHHHhcc-h
Confidence 999999999999999999999999999999999988899999999999999999999999999999999999999864 5
Q ss_pred hHHHHHHh
Q 001580 894 SFSKMVQS 901 (1050)
Q Consensus 894 ~~~~~~~~ 901 (1050)
.|.+++..
T Consensus 576 ~y~~l~~~ 583 (588)
T PRK11174 576 LFATLLAH 583 (588)
T ss_pred HHHHHHHH
Confidence 77777654
No 12
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.3e-72 Score=645.93 Aligned_cols=464 Identities=25% Similarity=0.395 Sum_probs=351.8
Q ss_pred cEEEEeEEEEeCCCCCC-CceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC----CCCeeE------------
Q 001580 41 AISIRNGYFSWDSKAER-PTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV----SDASAV------------ 103 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~-~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~----~g~~~~------------ 103 (1050)
.++++|+++.|...++. ++++||||++.+||++||||+|||||||+.++|.|++++. +|.+..
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 69999999999865332 5999999999999999999999999999999999999876 344321
Q ss_pred ----EeCcEEEEecCCC-CCc--ccHHHHhcc----CCCCC-H---HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCC
Q 001580 104 ----IRGTVAYVPQVSW-IFN--ATVRDNILF----GSAFE-P---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNI 168 (1050)
Q Consensus 104 ----~~~~i~~v~Q~~~-l~~--~TV~eni~~----g~~~~-~---~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~L 168 (1050)
..+.|+|+||+|. .+| .||.+.|.- ..... . .+..+.++..++.+.... ....++|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 1235999999986 343 477766642 11111 1 223334445555443322 2345799
Q ss_pred CHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccc-cCCcEEEEeccCcchhhh-cCEEEEEcCCeEee
Q 001580 169 SGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKE 246 (1050)
Q Consensus 169 SGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~-~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~ 246 (1050)
||||||||.||+||+.+|++||+||||++||+.++..|.+.+++.. ..|.++|+||||+..+.+ ||||+||.+|++++
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999888765 469999999999999876 79999999999999
Q ss_pred ccChhhhhcChH-HHHH-HHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhc
Q 001580 247 EGTFEDLSNNGE-LFQK-LMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERET 324 (1050)
Q Consensus 247 ~g~~~~l~~~~~-~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (1050)
.|+.+++++++. -|.. ++. ..|
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll~--------------------------------a~p------------------------ 259 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLLA--------------------------------AVP------------------------ 259 (539)
T ss_pred ecCHHHHHhccCCcccHHHHh--------------------------------hCC------------------------
Confidence 999988875421 0000 000 000
Q ss_pred ccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 325 GVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYW 404 (1050)
Q Consensus 325 ~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 404 (1050)
T Consensus 260 -------------------------------------------------------------------------------- 259 (539)
T COG1123 260 -------------------------------------------------------------------------------- 259 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 405 LIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSL 484 (1050)
Q Consensus 405 ~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (1050)
.. ..
T Consensus 260 ------------------------~~--~~-------------------------------------------------- 263 (539)
T COG1123 260 ------------------------RL--GD-------------------------------------------------- 263 (539)
T ss_pred ------------------------Cc--cc--------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001580 485 WAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGAN 564 (1050)
Q Consensus 485 ~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (1050)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 001580 565 RWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELP 644 (1050)
Q Consensus 565 ~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~ 644 (1050)
. .....+
T Consensus 264 ---------------------------------------------------------------------~----~~~~~~ 270 (539)
T COG1123 264 ---------------------------------------------------------------------E----KIIRLP 270 (539)
T ss_pred ---------------------------------------------------------------------c----cccccc
Confidence 0 000000
Q ss_pred CCCccccCCCCCCCCCCCCccEEEEEEEEEeCC---------CCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhc
Q 001580 645 SEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP---------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFR 715 (1050)
Q Consensus 645 ~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~---------~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g 715 (1050)
...+ . +....++++|+++.|.. +...+++||||+|.+||++||||+||||||||.++|+|
T Consensus 271 ~~~~--------~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~g 339 (539)
T COG1123 271 RRGP--------L---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAG 339 (539)
T ss_pred cccc--------c---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhC
Confidence 0000 0 01224899999999963 12468999999999999999999999999999999999
Q ss_pred cccCCccEEEECCee--cCCCChHHHhhheEEEcCCcc--ccc-ccHHHhccc----CCCCC----HHHHHHHHHHhcHH
Q 001580 716 IVELERGRILIDGFD--IAKFGLMDLRKILGIIPQSPV--LFS-GTVRFNLDP----FSEHS----DADLWEALERAHLK 782 (1050)
Q Consensus 716 ~~~p~~G~i~~~g~~--i~~~~~~~~r~~i~~v~Q~~~--lf~-~tv~~nl~~----~~~~~----~~~~~~~l~~~~~~ 782 (1050)
+++|++|+|.++|.+ .+.-.....|+++-+++|||. |.. .||+++|.. ..... .+++.+.++..++.
T Consensus 340 L~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~ 419 (539)
T COG1123 340 LLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLP 419 (539)
T ss_pred CCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCC
Confidence 999999999999987 232224457789999999996 433 499988741 11111 12344444444443
Q ss_pred HHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecC
Q 001580 783 DAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHR 860 (1050)
Q Consensus 783 ~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~ 860 (1050)
. ......+..||||||||+||||||+.+|++||+|||||+||+-+.+.+.+.|+++.+ |.|.|+||||
T Consensus 420 ~----------~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHD 489 (539)
T COG1123 420 P----------EFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHD 489 (539)
T ss_pred H----------HHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCC
Confidence 2 145666789999999999999999999999999999999999999999999998753 7999999999
Q ss_pred chhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHHHH
Q 001580 861 LNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFSKMV 899 (1050)
Q Consensus 861 ~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 899 (1050)
+..++. ||||+||++|+|+|.|+.+++.+.+...|.+..
T Consensus 490 l~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L 529 (539)
T COG1123 490 LAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKL 529 (539)
T ss_pred HHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHH
Confidence 999988 999999999999999999999988776676544
No 13
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=5.5e-70 Score=664.00 Aligned_cols=539 Identities=31% Similarity=0.437 Sum_probs=407.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 001580 349 LLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAP 428 (1050)
Q Consensus 349 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p 428 (1050)
.++.++...+....+.++....+...........+...+.++.+...++.+...++....+.+...++|..+++++++.|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~ 99 (567)
T COG1132 20 ILLLLLSALLSLLLPLLIGRIIDALLADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRLP 99 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33334444445555555554444333111112223333444445566777777777777889999999999999999999
Q ss_pred chhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 001580 429 MVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPL-LLLFYAAYLYYQSTARE 507 (1050)
Q Consensus 429 ~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-ll~~~~~~~~~~~~~~~ 507 (1050)
+.+|++++.|++++|+++|+..++..+......+...+..++..+++++...+...++++.. +++.+....+ .+..+.
T Consensus 100 ~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~-~~~~~~ 178 (567)
T COG1132 100 LSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLL-ARKSRK 178 (567)
T ss_pred HHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 99999999999999999999999988777644444445555566666666655443333332 2333333333 223355
Q ss_pred HHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHH
Q 001580 508 VKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWL----AIRLEIVGGLMIWLTA 583 (1050)
Q Consensus 508 ~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~ 583 (1050)
..+......+.+.+.+.|.++|++++|+|+.++...+.+....+...+............ .+...+...++++++
T Consensus 179 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 257 (567)
T COG1132 179 LSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALG- 257 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 555555666788999999999999999999988766555554444443332222222222 222222222222222
Q ss_pred HHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCC
Q 001580 584 TFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSS 663 (1050)
Q Consensus 584 ~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~ 663 (1050)
.+.+.. +..+ .+.+..++.+...+..++..+.......+....+.+|+.++++.+++... .... .....
T Consensus 258 ~~~~~~-~~~~-----~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~~~--~~~~~ 326 (567)
T COG1132 258 GFLVLS-GSLT-----VGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVED---PPDP--LKDTI 326 (567)
T ss_pred HHHHHc-CCCC-----HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CCCC--CCCCC
Confidence 222221 1111 22344445556666777777777888888889999999999987544211 1111 12334
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhhe
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 743 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i 743 (1050)
+.|+++||+|+|+++ +++|+|+||+++|||++||||||||||||++++|.|+|+|++|+|++||+|+++++...+|++|
T Consensus 327 ~~I~f~~vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I 405 (567)
T COG1132 327 GSIEFENVSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRI 405 (567)
T ss_pred CeEEEEEEEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhc
Confidence 669999999999753 3799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 744 GIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 744 ~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
+||||++.||++||++||.++.+ .++++++++++.++++++++++|+||||.+|++|.+|||||||||+||||++++|+
T Consensus 406 ~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ 485 (567)
T COG1132 406 GIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPP 485 (567)
T ss_pred cEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998876 69999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHhh
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 902 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~ 902 (1050)
|||||||||+||+++++.+++.+++..+++|+|+||||++++.+||+|+||++|+|++.|+|+||+++ ++.|.++++.+
T Consensus 486 ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~ 564 (567)
T COG1132 486 ILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQ 564 (567)
T ss_pred EEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHh
Confidence 99999999999999999999999988788999999999999999999999999999999999999997 67899888754
No 14
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-72 Score=686.16 Aligned_cols=486 Identities=22% Similarity=0.315 Sum_probs=351.3
Q ss_pred CCcEEEEeEEEEeCCC-CCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE--------------
Q 001580 39 LPAISIRNGYFSWDSK-AERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------- 103 (1050)
Q Consensus 39 ~~~i~~~~~~f~~~~~-~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------- 103 (1050)
.+.|+++|++++|+.. ..+++|+||||++++|+++||+|+||||||||+++|+|+++|++|.+..
T Consensus 10 ~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~ 89 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIE 89 (623)
T ss_pred CceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccc
Confidence 3479999999999632 2347999999999999999999999999999999999999998775431
Q ss_pred -----------Ee-CcEEEEecCC--CCC-cccHHHHhccCCC----CCH----HHHHHHHHHhCcHHHHhcCCCCCccc
Q 001580 104 -----------IR-GTVAYVPQVS--WIF-NATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTE 160 (1050)
Q Consensus 104 -----------~~-~~i~~v~Q~~--~l~-~~TV~eni~~g~~----~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~ 160 (1050)
.+ ..||||+|+| .++ ..||.||+.++.. ... ++..+.++..++... ...
T Consensus 90 ~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~--------~~~ 161 (623)
T PRK10261 90 LSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA--------QTI 161 (623)
T ss_pred cccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------hhH
Confidence 01 2599999998 455 5799999987521 121 122233444444210 012
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEE
Q 001580 161 IGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIIL 238 (1050)
Q Consensus 161 vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~ 238 (1050)
......+|||||||||+|||||+.+|++|||||||++||+.++..+.+.+.+... .|+|+|+||||++++.. ||||++
T Consensus 162 ~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~v 241 (623)
T PRK10261 162 LSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLV 241 (623)
T ss_pred HhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEE
Confidence 2345578999999999999999999999999999999999999999998877654 48999999999999865 799999
Q ss_pred EcCCeEeeccChhhhhcChH-HHH-HHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchh
Q 001580 239 VHEGMVKEEGTFEDLSNNGE-LFQ-KLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVL 316 (1050)
Q Consensus 239 l~~G~i~~~g~~~~l~~~~~-~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1050)
|++|++++.|+++++...+. .|. .+... .+.... . .+.
T Consensus 242 l~~G~i~~~g~~~~~~~~~~~~~~~~l~~~----------------------~~~~~~---------~------~~~--- 281 (623)
T PRK10261 242 MYQGEAVETGSVEQIFHAPQHPYTRALLAA----------------------VPQLGA---------M------KGL--- 281 (623)
T ss_pred eeCCeecccCCHHHhhcCCCChhhhhhhhc----------------------cCcccc---------c------ccc---
Confidence 99999999998877643210 000 00000 000000 0 000
Q ss_pred hhhhhhhcccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHH
Q 001580 317 IKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVL 396 (1050)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~ 396 (1050)
T Consensus 282 -------------------------------------------------------------------------------- 281 (623)
T PRK10261 282 -------------------------------------------------------------------------------- 281 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 397 VTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLI 476 (1050)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1050)
..+
T Consensus 282 -----------------------------~~~------------------------------------------------ 284 (623)
T PRK10261 282 -----------------------------DYP------------------------------------------------ 284 (623)
T ss_pred -----------------------------cCC------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHH
Q 001580 477 GIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRY 556 (1050)
Q Consensus 477 ~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~ 556 (1050)
...+ .
T Consensus 285 --------------------------------------~~~~---~---------------------------------- 289 (623)
T PRK10261 285 --------------------------------------RRFP---L---------------------------------- 289 (623)
T ss_pred --------------------------------------cccc---c----------------------------------
Confidence 0000 0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 557 TLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVER 636 (1050)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R 636 (1050)
. . ...++
T Consensus 290 ---------------------------------------~-------------------------------~---~~~~~ 296 (623)
T PRK10261 290 ---------------------------------------I-------------------------------S---LEHPA 296 (623)
T ss_pred ---------------------------------------c-------------------------------c---ccccc
Confidence 0 0 00000
Q ss_pred HHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCC---------CCCceeeeeEEecCCcEEEEECCCCCCHH
Q 001580 637 VGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE---------LPPVLHGLSFTIPPSDKVGIVGRTGAGKS 707 (1050)
Q Consensus 637 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~---------~~~~l~~vs~~i~~Ge~~~ivG~~GsGKS 707 (1050)
. ..+...+ . ... .....++++|+++.|+.. ..++|+||||+|++||++||+|+||||||
T Consensus 297 ~----~~~~~~~----~-~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKS 364 (623)
T PRK10261 297 K----QEPPIEQ----D-TVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKS 364 (623)
T ss_pred c----cCccccc----c-ccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHH
Confidence 0 0000000 0 000 011248999999999521 13699999999999999999999999999
Q ss_pred HHHHHHhccccCCccEEEECCeecCCCChH---HHhhheEEEcCCc--cccc-ccHHHhcccC---CCC-CHHHHHHHHH
Q 001580 708 SMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRKILGIIPQSP--VLFS-GTVRFNLDPF---SEH-SDADLWEALE 777 (1050)
Q Consensus 708 Tll~~l~g~~~p~~G~i~~~g~~i~~~~~~---~~r~~i~~v~Q~~--~lf~-~tv~~nl~~~---~~~-~~~~~~~~l~ 777 (1050)
||+++|+|+++|++|+|.++|.++...+.. .+|++|+||||++ .++. .||.+|+.+. ... ...+..
T Consensus 365 TLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~---- 440 (623)
T PRK10261 365 TTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAA---- 440 (623)
T ss_pred HHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHH----
Confidence 999999999999999999999999876543 3567899999998 3665 4999998531 111 111111
Q ss_pred HhcHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEE
Q 001580 778 RAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTM 854 (1050)
Q Consensus 778 ~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tv 854 (1050)
..+.++++.+ |++ ........+|||||||||+|||||+.+|+||||||||++||+.++..+.+.|+++.+ +.||
T Consensus 441 -~~~~~~L~~~--gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tv 517 (623)
T PRK10261 441 -ARVAWLLERV--GLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAY 517 (623)
T ss_pred -HHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEE
Confidence 1122334432 443 344556678999999999999999999999999999999999999999999988643 7899
Q ss_pred EEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHH
Q 001580 855 LIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 896 (1050)
Q Consensus 855 i~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 896 (1050)
|+||||++.+.. ||||++|++|+|++.|+++++...+...|.
T Consensus 518 i~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~ 560 (623)
T PRK10261 518 LFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYT 560 (623)
T ss_pred EEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHH
Confidence 999999999977 999999999999999999999865444443
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.3e-69 Score=703.90 Aligned_cols=310 Identities=17% Similarity=0.273 Sum_probs=224.4
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhhe
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 743 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i 743 (1050)
..|+++|++++|+++..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.+ +....|++|
T Consensus 1936 ~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~I 2014 (2272)
T TIGR01257 1936 DILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQNM 2014 (2272)
T ss_pred ceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhhE
Confidence 3599999999997533479999999999999999999999999999999999999999999999999865 455678899
Q ss_pred EEEcCCcccccc-cHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
|||||++.++.. |++|||.++.. ...+++.+. +.+.++. .|+..........|||||||||+|||||+.
T Consensus 2015 Gy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~-----v~~lLe~--lgL~~~~dk~~~~LSGGqKqRLslA~ALi~ 2087 (2272)
T TIGR01257 2015 GYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKV-----ANWSIQS--LGLSLYADRLAGTYSGGNKRKLSTAIALIG 2087 (2272)
T ss_pred EEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHH--cCCHHHhcCChhhCCHHHHHHHHHHHHHhc
Confidence 999999998865 99999965321 122222111 1223333 245555556667899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFSK 897 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 897 (1050)
+|+||||||||+|||+.+++.+++.|++.. +|+|||++||++++++. ||||++|++|++++.|++++++++.+..|.-
T Consensus 2088 ~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~~g~g~~l 2167 (2272)
T TIGR01257 2088 CPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFGDGYIV 2167 (2272)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHHhCCceEE
Confidence 999999999999999999999999999864 57999999999999987 9999999999999999999998776533221
Q ss_pred HHHhhccchHHHHHHHhhcccchhhhhhhhhccchhhhHHHhhHHHH--HhccchhhcccccCccchhchhhhhhhHHhh
Q 001580 898 MVQSTGAANAQYLRSLVLGGEAENKLREENKQIDGQRRWLASSRWAA--AAQYALAVSLTSSHNDLQRLEVEDQNNILKK 975 (1050)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 975 (1050)
.+....... ... +. .++-.++........ .........+. +......+....|++
T Consensus 2168 ~i~~~~~~~-~~~--------------~~---~~~v~~~i~~~fp~a~~~e~~~~~l~~~-----i~~~~~~~if~~L~~ 2224 (2272)
T TIGR01257 2168 TMKIKSPKD-DLL--------------PD---LNPVEQFFQGNFPGSVQRERHYNMLQFQ-----VSSSSLARIFQLLIS 2224 (2272)
T ss_pred EEEEcCcch-hhh--------------hH---HHHHHHHHhhcCccceeeccccceEEEE-----eCcccHHHHHHHHHh
Confidence 000000000 000 00 000000000000000 00000000010 011245667788999
Q ss_pred cchhh-hhHHHhhcCCCchhhhhhhccccc
Q 001580 976 TKDAV-VTLQGVLEGKHDKEIEESLNQHEV 1004 (1050)
Q Consensus 976 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1050)
.|..+ +..|++++++||+||++..++...
T Consensus 2225 ~k~~l~I~dysvsqtSLE~VFl~l~~~q~~ 2254 (2272)
T TIGR01257 2225 HKDSLLIEEYSVTQTTLDQVFVNFAKQQTE 2254 (2272)
T ss_pred cCCCCCeEEEEcCCCCHHHHHHHHhccccc
Confidence 98777 999999999999999999976543
No 16
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=4.4e-69 Score=669.72 Aligned_cols=542 Identities=24% Similarity=0.303 Sum_probs=408.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 344 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLF--YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 421 (1050)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 421 (1050)
.++..+++.++...+....|.++....|..........+ +...++++.+...++.+++.++....+.+...+++..++
T Consensus 137 ~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 216 (686)
T TIGR03797 137 DLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVW 216 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555566666666777776666654322211112 233344555667788899999999999999999999999
Q ss_pred HHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 422 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 501 (1050)
Q Consensus 422 ~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~ 501 (1050)
+++++.|+.||++++.|++++|+. |+..+...+...+...+..+...+..+++++..++...++++.++++.++...++
T Consensus 217 ~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~ 295 (686)
T TIGR03797 217 DRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVL 295 (686)
T ss_pred HHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999997 7888877665544444434333444444444555544443333333333333333
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH---HHHHH
Q 001580 502 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI---VGGLM 578 (1050)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~ 578 (1050)
.+..+...+......++..+.+.|.++|+.+||+++.++++...+.+......+..........+....... +..++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 375 (686)
T TIGR03797 296 GLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAA 375 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334444455677889999999999999999998887777766665554444333333333322222 22222
Q ss_pred HHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCC
Q 001580 579 IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 658 (1050)
Q Consensus 579 ~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~ 658 (1050)
+++++.+.+. .+..+.. .+..+..+...+..++..+.......+....+.+|+.++++.+++.+.. ...
T Consensus 376 il~~g~~lv~-~g~ltiG-----~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~---~~~-- 444 (686)
T TIGR03797 376 LFAAAISLLG-GAGLSLG-----SFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA---KTD-- 444 (686)
T ss_pred HHHHHHHHHH-cCCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC---cCC--
Confidence 2233333332 2322211 1111223334555667777777788888999999999999876553211 111
Q ss_pred CCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH
Q 001580 659 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 738 (1050)
Q Consensus 659 ~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~ 738 (1050)
..+..+.|+++||+|+|++..+++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++||+|++++++.+
T Consensus 445 ~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~ 524 (686)
T TIGR03797 445 PGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQA 524 (686)
T ss_pred CCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHH
Confidence 11224579999999999754457999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHc
Q 001580 739 LRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 818 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall 818 (1050)
+|++||||||+|.+|++||+|||.++.+.++++++++++.++++++++++|.|++|.+|++|.+|||||||||+||||++
T Consensus 525 lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll 604 (686)
T TIGR03797 525 VRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALV 604 (686)
T ss_pred HHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999987668899999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHH
Q 001580 819 RRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKM 898 (1050)
Q Consensus 819 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~ 898 (1050)
++|+|||||||||+||+++++.+.+.|++. ++|+|+||||++.+..||+|++|++|+|++.|+|+||+++ ++.|..+
T Consensus 605 ~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l 681 (686)
T TIGR03797 605 RKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQL 681 (686)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHH
Confidence 999999999999999999999999999885 6899999999999999999999999999999999999986 4677776
Q ss_pred HH
Q 001580 899 VQ 900 (1050)
Q Consensus 899 ~~ 900 (1050)
+.
T Consensus 682 ~~ 683 (686)
T TIGR03797 682 AR 683 (686)
T ss_pred HH
Confidence 64
No 17
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-69 Score=603.69 Aligned_cols=503 Identities=21% Similarity=0.323 Sum_probs=403.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 001580 389 LLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQ 468 (1050)
Q Consensus 389 ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~ 468 (1050)
+++++..+..+..-...+....+.-.++|.++|+++...+..-..+...|+++||+..|++.+|..+-..+..++..+..
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~ 145 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVL 145 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHH
Confidence 34555666777777777888888999999999999999999999999999999999999999999776666655555554
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHH
Q 001580 469 LLSTFVLIGIVSTM-SLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADING 547 (1050)
Q Consensus 469 ~~~~~~~~~~~~~~-~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~ 547 (1050)
...+.+...++++. .+.+.+.++++.+++...+++..+...+.....++.+.+++.+++.|...++.|+..+.+.+.+.
T Consensus 146 ~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~ 225 (573)
T COG4987 146 IAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALE 225 (573)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHH
Confidence 44444444444433 33333333333444455555556666666667788899999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 001580 548 KSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVL-RLASL 626 (1050)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~-~~~~~ 626 (1050)
.......+..........|..+.+.++.++++.....|.....+. +....-.+.++++++| .....+.++. .....
T Consensus 226 ~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~-G~~~~~~aa~~ll~~f--~~~eaf~~L~~~A~~~ 302 (573)
T COG4987 226 ATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGA-GALAQPGAALALLVIF--AALEAFEPLAPGAFQH 302 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcC-CCcchhHHHHHHHHHH--HHHHHHhhhcchhHHH
Confidence 888888888887778888888888777776665443333322111 1111111222222222 2233333333 34455
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCH
Q 001580 627 AENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGK 706 (1050)
Q Consensus 627 ~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGK 706 (1050)
......+..|+.++.+.+++.... +.+ .+. ....++++||+|+|+++.+++|+|+||++++||++||+|+|||||
T Consensus 303 lgq~~~Sa~Rl~~i~~q~~e~~~~-~~~--~~~--~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGK 377 (573)
T COG4987 303 LGQVIASARRLNDILDQKPEVTFP-DEQ--TAT--TGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGK 377 (573)
T ss_pred hhHHHHHHHHHhhhccCCcccCCC-ccc--cCC--ccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCH
Confidence 667778999999988776654322 111 111 112699999999998877789999999999999999999999999
Q ss_pred HHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhcHHHHH
Q 001580 707 SSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAI 785 (1050)
Q Consensus 707 STll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~i 785 (1050)
||++++|+|.++|++|+|.++|.++..++..++|+.|++++|.+.+|++|+|+||...+ +.+|++++++++++++++++
T Consensus 378 STllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~ 457 (573)
T COG4987 378 STLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLL 457 (573)
T ss_pred HHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998765 46999999999999999999
Q ss_pred HHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhh
Q 001580 786 RRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTII 865 (1050)
Q Consensus 786 ~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~ 865 (1050)
+..|+||+|++||+|..||||||||++|||+|+++.+++||||||.|||+.|++.+.+.|.+..+|+|+|+||||+..++
T Consensus 458 ~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le 537 (573)
T COG4987 458 ESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLE 537 (573)
T ss_pred HhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 001580 866 DCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 900 (1050)
Q Consensus 866 ~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~ 900 (1050)
.||||+||++|+++++|+|.+|+++ .+.|.++++
T Consensus 538 ~~drIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q 571 (573)
T COG4987 538 RMDRIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQ 571 (573)
T ss_pred hcCEEEEEECCeeeecCCHHhhhcc-ccHHHHHhc
Confidence 9999999999999999999999985 457877654
No 18
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1e-68 Score=610.31 Aligned_cols=509 Identities=24% Similarity=0.325 Sum_probs=411.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHH
Q 001580 384 NTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFM 463 (1050)
Q Consensus 384 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~ 463 (1050)
...+.++.+...++.+.+.......+......+|..+++++.+.+..+-...++|+..+.+...+++++.++..+++.++
T Consensus 43 ~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~ 122 (559)
T COG4988 43 LILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMF 122 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555667778888888888999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHH
Q 001580 464 GQVSQLLSTFVLIGIVSTM---SLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYD 540 (1050)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~---~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~ 540 (1050)
......+.+++.+++..|. .+++.+|++++++++. ....+...+....+-.++.++|.+.++|+.|+|+|+..+
T Consensus 123 ~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv---g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~ 199 (559)
T COG4988 123 LSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV---GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTE 199 (559)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccH
Confidence 8777777777666666554 3445556665554433 223333333444455678899999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 001580 541 RMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAV 620 (1050)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 620 (1050)
...+...+......+.+..........++.++++..+.+.+++.+..+..-..+....+.+.+. +..+.-++.|+..+
T Consensus 200 ~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~--LiLAPEff~PlR~l 277 (559)
T COG4988 200 ATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFV--LILAPEFFQPLRDL 277 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHH--HHHhHHHHHHHHHH
Confidence 8887777777777777766666677777788887777666666554332111011112222222 22233455566666
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEEC
Q 001580 621 LRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVG 700 (1050)
Q Consensus 621 ~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG 700 (1050)
-..+....+...+.+.+..+.+.|.+.+...+. ....+.....+.++|++++|++++ ++++|+||++++|+++||||
T Consensus 278 Gs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~--~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~talvG 354 (559)
T COG4988 278 GSFFHAAAAGEAAADKLFTLLESPVATPGSGEK--AEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTALVG 354 (559)
T ss_pred HHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccc--cccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEEEEEC
Confidence 666666677778888898888776654322111 011121223456669999998765 79999999999999999999
Q ss_pred CCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHh
Q 001580 701 RTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERA 779 (1050)
Q Consensus 701 ~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~ 779 (1050)
+||||||||+++|+|+++|++|+|.+||++++++++..+|+++++|||+|.+|++|+||||.+++. .+++++.++++.+
T Consensus 355 ~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a 434 (559)
T COG4988 355 ASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQA 434 (559)
T ss_pred CCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999998876 6899999999999
Q ss_pred cHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeec
Q 001580 780 HLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAH 859 (1050)
Q Consensus 780 ~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH 859 (1050)
++.+++.. |.|+||.+||+|.+|||||+|||+||||++++++++||||||++||.+|++.|.+.|.++.+++|||+|||
T Consensus 435 ~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itH 513 (559)
T COG4988 435 GLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITH 513 (559)
T ss_pred cHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEc
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHhh
Q 001580 860 RLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 902 (1050)
Q Consensus 860 ~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~ 902 (1050)
|++.+.+||+|+||++|++++.|+|++|.++. +.|..++..+
T Consensus 514 rl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~-~~y~~l~~~q 555 (559)
T COG4988 514 RLEDAADADRIVVLDNGRLVEQGTHEELSEKQ-GLYANLLKQQ 555 (559)
T ss_pred ChHHHhcCCEEEEecCCceeccCCHHHHhhcC-cHHHHHHHHH
Confidence 99999999999999999999999999998864 5788887653
No 19
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.8e-68 Score=667.23 Aligned_cols=543 Identities=23% Similarity=0.324 Sum_probs=407.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccccCCCChh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 347 ILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPL--FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSI 424 (1050)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l 424 (1050)
..+++.++...+....|.++....|.......... .+...+.++.+...++.+++.++....+.+...+++..+++++
T Consensus 158 ~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 237 (710)
T TIGR03796 158 YLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHI 237 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555556666666666665432222221 2223344445667788889999999999999999999999999
Q ss_pred HcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 425 LRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQST 504 (1050)
Q Consensus 425 l~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~ 504 (1050)
++.|+.+|+++++|++++|+..| ..+...+...+...+..+..++..+++++.+++...++++.++++.+++...+.+.
T Consensus 238 l~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~ 316 (710)
T TIGR03796 238 LRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRR 316 (710)
T ss_pred HcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 56776665555455555555555555555555555444444444444444444444
Q ss_pred HHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH---HHHHHHHH
Q 001580 505 AREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI---VGGLMIWL 581 (1050)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~ 581 (1050)
.++..+......+...+.+.|.++|+.+||+++.++.+.+.+.+......+..........+....... +..+++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 396 (710)
T TIGR03796 317 RVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILV 396 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444556678889999999999999999998877777655554444333222222222222222 22222222
Q ss_pred HHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCC--C-CCCC
Q 001580 582 TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIES--N-RPPP 658 (1050)
Q Consensus 582 ~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~--~-~~~~ 658 (1050)
++.+.+. .+.++. +.+..++.+...+..++..+......+.....+.+|+.++++.+++.+..... . ...+
T Consensus 397 ~g~~~v~-~g~lt~-----G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~ 470 (710)
T TIGR03796 397 VGGLRVM-EGQLTI-----GMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEP 470 (710)
T ss_pred HHHHHHH-cCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccccccccc
Confidence 2333332 232221 11222333444556677777777788888999999999999877654321100 0 0001
Q ss_pred CCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH
Q 001580 659 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 738 (1050)
Q Consensus 659 ~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~ 738 (1050)
.++..+.|+++||+|+|++..+++|+|+||+|+|||++||+||||||||||+++|+|+|+|++|+|.+||+|++++++.+
T Consensus 471 ~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~ 550 (710)
T TIGR03796 471 SPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREV 550 (710)
T ss_pred CCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHH
Confidence 02234679999999999865457999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhheEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 739 LRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+|++|+||||+|.+|++||+|||.++. +.++++++++++.+++++++.++|.|++|.+|++|.+|||||||||+||||+
T Consensus 551 lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARal 630 (710)
T TIGR03796 551 LANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARAL 630 (710)
T ss_pred HHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999998765 4689999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSK 897 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 897 (1050)
+++|+|||||||||+||+++++.+.+.|++ .++|+|+||||++++..||+|++|++|++++.|+|+||+++. +.|.+
T Consensus 631 l~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~~-~~y~~ 707 (710)
T TIGR03796 631 VRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAVG-GAYAR 707 (710)
T ss_pred hhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHHcC-CcHHH
Confidence 999999999999999999999999999987 689999999999999999999999999999999999999864 56766
Q ss_pred HH
Q 001580 898 MV 899 (1050)
Q Consensus 898 ~~ 899 (1050)
++
T Consensus 708 l~ 709 (710)
T TIGR03796 708 LI 709 (710)
T ss_pred Hh
Confidence 54
No 20
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.9e-68 Score=663.56 Aligned_cols=541 Identities=24% Similarity=0.360 Sum_probs=413.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 345 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLF--YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLH 422 (1050)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 422 (1050)
++..+++.++...+....|.+....+|..........+ ...++.++.++..++.+++.++......+...++|..+++
T Consensus 163 l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~ 242 (711)
T TIGR00958 163 LISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLRIREDLFR 242 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555556666666676666665543322111111 2233444555667777888888888999999999999999
Q ss_pred HHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 423 SILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQ 502 (1050)
Q Consensus 423 ~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~ 502 (1050)
+++++|+.||++++.|++++|+++|+..++..+...+..++..+..++..+++++.+++...++++..+++.+.+...+.
T Consensus 243 ~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~ 322 (711)
T TIGR00958 243 SLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVFG 322 (711)
T ss_pred HHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988887777777777777776666666666554444433333333444444
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHH
Q 001580 503 STAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMG---ANRWLAIRLEIVGGLMI 579 (1050)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~ 579 (1050)
+..++..+......+...+.+.|+++|+++||+|+.++++.+.+.+..+...+....... ...|....+..+..+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 402 (711)
T TIGR00958 323 KRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVLV 402 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444455566778899999999999999999988777776665554433322211 11222222222222233
Q ss_pred HHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCC
Q 001580 580 WLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPG 659 (1050)
Q Consensus 580 ~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~ 659 (1050)
+..+.+.+. .+..+. ..+..++.+...+..++..+............+.+|+.++++.+++.+.. .. ...
T Consensus 403 l~~g~~lv~-~g~it~-----G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~---~~-~~~ 472 (711)
T TIGR00958 403 LYYGGQLVL-TGKVSS-----GNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLT---GT-LAP 472 (711)
T ss_pred HHHHHHHHH-cCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC---CC-CCC
Confidence 333333332 233221 22233344556677777888888888889999999999999776543211 11 111
Q ss_pred CCCCccEEEEEEEEEeCCC-CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH
Q 001580 660 WPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 738 (1050)
Q Consensus 660 ~~~~~~i~~~~v~~~y~~~-~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~ 738 (1050)
++..+.|+++||+|+|++. .+++|+|+||+|+|||++||+||||||||||+++|+|+|+|++|+|.+||+|+++++...
T Consensus 473 ~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~ 552 (711)
T TIGR00958 473 LNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHY 552 (711)
T ss_pred CCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHH
Confidence 2234679999999999743 247999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhheEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 739 LRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+|++|+||||+|.+|++||+|||.++. ..++++++++++.++++++++++|.|+||.+|++|.+|||||||||+||||+
T Consensus 553 lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARAL 632 (711)
T TIGR00958 553 LHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARAL 632 (711)
T ss_pred HHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999764 4678999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSK 897 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 897 (1050)
+++|+|||||||||+||+++++.+++ . ...+++|+|+||||++++..||+|++|++|+|++.|+|+||+++. +.|.+
T Consensus 633 l~~p~ILILDEpTSaLD~~te~~i~~-~-~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~-~~y~~ 709 (711)
T TIGR00958 633 VRKPRVLILDEATSALDAECEQLLQE-S-RSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQ-GCYKH 709 (711)
T ss_pred hcCCCEEEEEccccccCHHHHHHHHH-h-hccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCC-CchHh
Confidence 99999999999999999999999999 3 334789999999999999999999999999999999999999864 46664
Q ss_pred H
Q 001580 898 M 898 (1050)
Q Consensus 898 ~ 898 (1050)
+
T Consensus 710 l 710 (711)
T TIGR00958 710 L 710 (711)
T ss_pred c
Confidence 3
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-71 Score=665.07 Aligned_cols=449 Identities=20% Similarity=0.306 Sum_probs=339.4
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCC--CCCCeeE-------------E
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP--VSDASAV-------------I 104 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~--~~g~~~~-------------~ 104 (1050)
++|+++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++| ++|.+.. .
T Consensus 4 ~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~ 80 (506)
T PRK13549 4 YLLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTE 80 (506)
T ss_pred ceEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHH
Confidence 3699999999996 35799999999999999999999999999999999999986 6776532 1
Q ss_pred eCcEEEEecCCCCC-cccHHHHhccCCCC------CHHH----HHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHH
Q 001580 105 RGTVAYVPQVSWIF-NATVRDNILFGSAF------EPAR----YEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 173 (1050)
Q Consensus 105 ~~~i~~v~Q~~~l~-~~TV~eni~~g~~~------~~~~----~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqr 173 (1050)
+..+|||+|++.++ ..||+||+.++... +... ....++..++.. .......+||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGqk 149 (506)
T PRK13549 81 RAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDI-----------NPATPVGNLGLGQQ 149 (506)
T ss_pred HCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCCHHHH
Confidence 24599999999876 67999999886421 1111 112222222211 12344578999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 174 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 174 qRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
|||+|||||+.+|++|||||||++||+.++.++++.+.+...+|+|+|++|||++++.. ||++++|++|+++..|+.++
T Consensus 150 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 229 (506)
T PRK13549 150 QLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAG 229 (506)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeeccccc
Confidence 99999999999999999999999999999999999887765568999999999999875 79999999999987665433
Q ss_pred hhcChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhcccccHHHH
Q 001580 253 LSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVL 332 (1050)
Q Consensus 253 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1050)
+.... ..
T Consensus 230 ~~~~~-----~~-------------------------------------------------------------------- 236 (506)
T PRK13549 230 MTEDD-----II-------------------------------------------------------------------- 236 (506)
T ss_pred CCHHH-----HH--------------------------------------------------------------------
Confidence 21000 00
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 333 SRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYA 412 (1050)
Q Consensus 333 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 412 (1050)
.
T Consensus 237 ~------------------------------------------------------------------------------- 237 (506)
T PRK13549 237 T------------------------------------------------------------------------------- 237 (506)
T ss_pred H-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 413 AKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLL 492 (1050)
Q Consensus 413 ~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll 492 (1050)
++
T Consensus 238 ------------------------------~~------------------------------------------------ 239 (506)
T PRK13549 238 ------------------------------MM------------------------------------------------ 239 (506)
T ss_pred ------------------------------Hh------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 001580 493 LFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLE 572 (1050)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (1050)
+
T Consensus 240 --------~----------------------------------------------------------------------- 240 (506)
T PRK13549 240 --------V----------------------------------------------------------------------- 240 (506)
T ss_pred --------h-----------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccC
Q 001580 573 IVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIE 652 (1050)
Q Consensus 573 ~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~ 652 (1050)
+.. .. . ..+...+
T Consensus 241 -----------------~~~-----------------------------------------~~---~--~~~~~~~---- 253 (506)
T PRK13549 241 -----------------GRE-----------------------------------------LT---A--LYPREPH---- 253 (506)
T ss_pred -----------------CcC-----------------------------------------cc---c--ccccccc----
Confidence 000 00 0 0000000
Q ss_pred CCCCCCCCCCCccEEEEEEEEEeCC-CCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-CCccEEEECCee
Q 001580 653 SNRPPPGWPSSGSIKFEDVVLRYRP-ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-LERGRILIDGFD 730 (1050)
Q Consensus 653 ~~~~~~~~~~~~~i~~~~v~~~y~~-~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-p~~G~i~~~g~~ 730 (1050)
. +....++++|++++|+. +..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.+
T Consensus 254 ----~---~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~ 326 (506)
T PRK13549 254 ----T---IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKP 326 (506)
T ss_pred ----C---CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEE
Confidence 0 01124899999999942 12369999999999999999999999999999999999999 599999999999
Q ss_pred cCCCCh-HHHhhheEEEcCCc---cccc-ccHHHhcccCC--CCCH-HHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCC
Q 001580 731 IAKFGL-MDLRKILGIIPQSP---VLFS-GTVRFNLDPFS--EHSD-ADLWEALERAHLKDAIRRNSLGLD-AQVSEAGE 801 (1050)
Q Consensus 731 i~~~~~-~~~r~~i~~v~Q~~---~lf~-~tv~~nl~~~~--~~~~-~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~ 801 (1050)
+...+. ...++.++|+||++ .+|. .|+.+|+.+.. .... ..+........+.++++.+ |+. ........
T Consensus 327 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~ 404 (506)
T PRK13549 327 VKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRL--KVKTASPELAIA 404 (506)
T ss_pred CCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhc--CccCCCcccccc
Confidence 865543 34567799999996 3554 59999996421 1100 0000001112244555554 443 23456667
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEE
Q 001580 802 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVL 879 (1050)
Q Consensus 802 ~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~ 879 (1050)
+||||||||++|||||+.+|+||||||||++||+.+.+.+++.|+++. +++|||+|||+++++.. ||++++|++|+++
T Consensus 405 ~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~ 484 (506)
T PRK13549 405 RLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLK 484 (506)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEE
Confidence 899999999999999999999999999999999999999999998864 47899999999999877 9999999999999
Q ss_pred EecChhHH
Q 001580 880 EYDTPEEL 887 (1050)
Q Consensus 880 ~~g~~~el 887 (1050)
..|+++++
T Consensus 485 ~~~~~~~~ 492 (506)
T PRK13549 485 GDLINHNL 492 (506)
T ss_pred EEeccccC
Confidence 99988876
No 22
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.2e-68 Score=647.36 Aligned_cols=496 Identities=24% Similarity=0.338 Sum_probs=389.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 001580 389 LLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQ 468 (1050)
Q Consensus 389 ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~ 468 (1050)
++.++..++.++..++....+.+...++|.++|++++++|+.+|++++.|++++|+++|++.+...+...+..++..++.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~ 147 (574)
T PRK11160 68 GAAIGRTAGRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVV 147 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556777788888888899999999999999999999999999999999999999999999999887777777776666
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHH
Q 001580 469 LLSTFVLIGIVSTMSLWAIM-PLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADING 547 (1050)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~-~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~ 547 (1050)
++.++++++++.+...++++ ++++++.....++.+..+...+......+.+.+.+.|.++|++++|+|+.++++.+.+.
T Consensus 148 ~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~ 227 (574)
T PRK11160 148 ILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLE 227 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHH
Confidence 66666666666655444332 22222222223333443444444455667788899999999999999999998887777
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH---HHHHHHHHhcCccchhhhHHHHHHHHHHH----HHHHHHHHHHH
Q 001580 548 KSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIW---LTATFAVVQNGSAENQEAFASTMGLLLSY----ALNITSLLTAV 620 (1050)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~v~~~~~~~~~~~~~~~~g~~l~~----~~~~~~~~~~~ 620 (1050)
+..+...+..........+......++..+... .++.+.+ .+..+ .|.++++ ......++.++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~--~g~~t--------~g~l~a~~~~~~~~~~~~~~~l 297 (574)
T PRK11160 228 QTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGV--GGNAQ--------PGALIALFVFAALAAFEALMPV 297 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccc--------hhHHHHHHHHHHHHHHHHHHHH
Confidence 766665554444333333333322322222111 1111211 22221 2222221 12233456666
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEEC
Q 001580 621 LRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVG 700 (1050)
Q Consensus 621 ~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG 700 (1050)
............+.+|+.++++.+++.+.. ..... .+..+.|+++||+|+|+++.+++|+|+||+++|||++||+|
T Consensus 298 ~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~--~~~~~--~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG 373 (574)
T PRK11160 298 AGAFQHLGQVIASARRINEITEQKPEVTFP--TTSTA--AADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLG 373 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--cccCC--CCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEEC
Confidence 677777788899999999999876542111 01111 12345699999999997543479999999999999999999
Q ss_pred CCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHh
Q 001580 701 RTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERA 779 (1050)
Q Consensus 701 ~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~ 779 (1050)
|||||||||+++|+|+++|++|+|.+||+++++++..++|++|+||||+|.+|++|++|||.++. +.++++++++++.+
T Consensus 374 ~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~ 453 (574)
T PRK11160 374 RTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQV 453 (574)
T ss_pred CCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999998765 46889999999999
Q ss_pred cHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeec
Q 001580 780 HLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAH 859 (1050)
Q Consensus 780 ~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH 859 (1050)
++++++++ |.||||.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+++.|++..+++|+|+|||
T Consensus 454 ~l~~~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitH 532 (574)
T PRK11160 454 GLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITH 532 (574)
T ss_pred CCHHHHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred CchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 001580 860 RLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 900 (1050)
Q Consensus 860 ~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~ 900 (1050)
|++++..||+|++|++|++++.|+|+||+++. +.|.++++
T Consensus 533 r~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-g~y~~l~~ 572 (574)
T PRK11160 533 RLTGLEQFDRICVMDNGQIIEQGTHQELLAQQ-GRYYQLKQ 572 (574)
T ss_pred ChhHHHhCCEEEEEeCCeEEEeCCHHHHHhcC-cHHHHHHh
Confidence 99999999999999999999999999999864 57877664
No 23
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.4e-68 Score=665.31 Aligned_cols=542 Identities=21% Similarity=0.317 Sum_probs=407.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 346 LILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPL--FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHS 423 (1050)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 423 (1050)
+..+++.++...+....|.++..+.|.......... .+...+.++.+...++.+++.++....+.+...+++..++++
T Consensus 159 ~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 238 (708)
T TIGR01193 159 VNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRLSIDIILSYIKH 238 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555556666677777777665433222111 122233344556677888899999999999999999999999
Q ss_pred HHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 424 ILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQS 503 (1050)
Q Consensus 424 ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~ 503 (1050)
++++|+.||++++.|++++|++ |...+.+.+.......+..+...+..+++++++++...++++..+++++++...+.+
T Consensus 239 ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~ 317 (708)
T TIGR01193 239 LFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLSLLSIPVYAVIIILFKR 317 (708)
T ss_pred HHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 888887766554444444444444444444444444444433333333344444555
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHH---HHHHHHHHHHHHHH
Q 001580 504 TAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRW---LAIRLEIVGGLMIW 580 (1050)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~ 580 (1050)
..++..+......+...+.+.|+++|+++||+++.++++.+.+.+......+..........+ ....+..+..++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il 397 (708)
T TIGR01193 318 TFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKAVTKLILNVVIL 397 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555555566677888999999999999999999887777666555443333222221111 12222222233333
Q ss_pred HHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCC
Q 001580 581 LTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGW 660 (1050)
Q Consensus 581 ~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~ 660 (1050)
+++.+.+. .+..+.. .+..+..+...+..++..+.......+....+.+|+.++++.+++.+... .....+
T Consensus 398 ~~g~~lv~-~g~ls~G-----~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~---~~~~~~ 468 (708)
T TIGR01193 398 WTGAYLVM-RGKLTLG-----QLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKK---KRTELN 468 (708)
T ss_pred HHHHHHHH-cCCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc---cccCCC
Confidence 33333333 2322211 12222334445566777777777888889999999999998776543211 101112
Q ss_pred CCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHh
Q 001580 661 PSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLR 740 (1050)
Q Consensus 661 ~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r 740 (1050)
+..+.|+++||+|+|+++ +++|+|+||+|+|||++||+||||||||||+++|+|+|+|++|+|++||+|++++++.++|
T Consensus 469 ~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr 547 (708)
T TIGR01193 469 NLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLR 547 (708)
T ss_pred CCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHH
Confidence 334679999999999743 4799999999999999999999999999999999999999999999999999999999999
Q ss_pred hheEEEcCCcccccccHHHhcccC--CCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHc
Q 001580 741 KILGIIPQSPVLFSGTVRFNLDPF--SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 818 (1050)
Q Consensus 741 ~~i~~v~Q~~~lf~~tv~~nl~~~--~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall 818 (1050)
++||||||+|.+|++||+|||.++ ...++++++++++.++++++++++|.||||.+|++|.+|||||||||+||||++
T Consensus 548 ~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialARall 627 (708)
T TIGR01193 548 QFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALARALL 627 (708)
T ss_pred HheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999986 346889999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHH
Q 001580 819 RRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKM 898 (1050)
Q Consensus 819 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~ 898 (1050)
++|+|||||||||+||+++++.+++.|++. +++|+|+||||++.+..||+|++|++|++++.|+|+||+++. +.|..+
T Consensus 628 ~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~~-~~y~~l 705 (708)
T TIGR01193 628 TDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDRN-GFYASL 705 (708)
T ss_pred hCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhcC-CcHHHH
Confidence 999999999999999999999999999885 689999999999999999999999999999999999999864 567766
Q ss_pred HH
Q 001580 899 VQ 900 (1050)
Q Consensus 899 ~~ 900 (1050)
++
T Consensus 706 ~~ 707 (708)
T TIGR01193 706 IH 707 (708)
T ss_pred hh
Confidence 53
No 24
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.1e-68 Score=649.11 Aligned_cols=542 Identities=25% Similarity=0.388 Sum_probs=407.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 345 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLF----YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAM 420 (1050)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 420 (1050)
+...+++.++...+....|.++..+.|........... +..++.++.++..++.+...++....+.+...+++..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l 104 (592)
T PRK10790 25 LGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDV 104 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555555666666677776666643221111111 11223334445666778888888889999999999999
Q ss_pred HHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 421 LHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLY 500 (1050)
Q Consensus 421 ~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~ 500 (1050)
++++++.|..+|++.+.|++++|+++|+..++..+...+..++..+..++..+++++++.+...++++..+++..+....
T Consensus 105 ~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~ 184 (592)
T PRK10790 105 MDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVI 184 (592)
T ss_pred HHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887776666666666666665555555554433322222222222233
Q ss_pred HHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHH-
Q 001580 501 YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWL-AIRLEIVGGLM- 578 (1050)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~- 578 (1050)
+.+..+...+......+....++.|.++|+.+||+|+.++++.+.+.+..+...+..........+. .....++..++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (592)
T PRK10790 185 YQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALIL 264 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333445667788999999999999999998887777766554444332222211111 11111111111
Q ss_pred --HHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCC
Q 001580 579 --IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRP 656 (1050)
Q Consensus 579 --~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~ 656 (1050)
+++...+ + ..+..+ .+.+..++.+...+..++..+......++....+.+|+.++++.+++.... ..
T Consensus 265 ~~~~~~~~~-~-~~g~is-----~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~---~~- 333 (592)
T PRK10790 265 CGLLMLFGF-S-ASGTIE-----VGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN---DD- 333 (592)
T ss_pred HHHHHHHHH-H-HCCCcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC---Cc-
Confidence 1111111 1 122221 112223344555677778888888888899999999999998765432111 11
Q ss_pred CCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCCh
Q 001580 657 PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL 736 (1050)
Q Consensus 657 ~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~ 736 (1050)
.++..+.|+++||+|+|+++ +++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||.|++++++
T Consensus 334 --~~~~~~~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~ 410 (592)
T PRK10790 334 --RPLQSGRIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSH 410 (592)
T ss_pred --cCCCCCeEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCH
Confidence 11223569999999999753 479999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 737 MDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 737 ~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
+.+|++|+||||+|.+|++|+++||.++.+.++++++++++.++++++++++|.|+||.+|++|.+||||||||++||||
T Consensus 411 ~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARa 490 (592)
T PRK10790 411 SVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARV 490 (592)
T ss_pred HHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999887778999999999999999999999999999999999999999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHH
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFS 896 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 896 (1050)
|+++|+|||||||||+||+++++.+.+.|++..+++|+|+||||++.+..||+|++|++|++++.|+|+||+++. +.|.
T Consensus 491 Ll~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~-~~y~ 569 (592)
T PRK10790 491 LVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQ-GRYW 569 (592)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCC-CHHH
Confidence 999999999999999999999999999999987889999999999999999999999999999999999999874 6788
Q ss_pred HHHHh
Q 001580 897 KMVQS 901 (1050)
Q Consensus 897 ~~~~~ 901 (1050)
++++.
T Consensus 570 ~l~~~ 574 (592)
T PRK10790 570 QMYQL 574 (592)
T ss_pred HHHHH
Confidence 77754
No 25
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-70 Score=666.53 Aligned_cols=513 Identities=23% Similarity=0.349 Sum_probs=402.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHH
Q 001580 380 PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFV 459 (1050)
Q Consensus 380 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~ 459 (1050)
...+.+.+..++++.++..++...++...+.+...++|...++.+||+++.||+.+..|++..++++|+..+++.+...+
T Consensus 70 ~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKv 149 (1228)
T KOG0055|consen 70 VSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKV 149 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHH
Confidence 34456667778888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchH
Q 001580 460 NMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAY 539 (1050)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~ 539 (1050)
..++..+..++..+++.++..|...++++++.++.......+.+........+..+-++.-+...|++.+++|+.+|+.+
T Consensus 150 g~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq 229 (1228)
T KOG0055|consen 150 GNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGE 229 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCc
Confidence 98888888888888877777765554444333332222222222111112222222233445778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHH
Q 001580 540 DRMADINGKSMDKNIRYTLVNMGAN----RWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITS 615 (1050)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 615 (1050)
++..+.+.+.+....++........ .+..+.+....++.+|+++.+... +..+....+....+.++ ...
T Consensus 230 ~~e~~ry~~~L~~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~--~~~~~g~v~~v~~~vl~-----g~~ 302 (1228)
T KOG0055|consen 230 KKEIERYSKALENALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILN--GGYNGGDVITVFFSVLI-----GGM 302 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCceEEEEEeehhh-----hhh
Confidence 9999999988888877765543221 112222333445555555444433 22222222211111111 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCC-CCceeeeeEEecCCc
Q 001580 616 LLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPEL-PPVLHGLSFTIPPSD 694 (1050)
Q Consensus 616 ~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~vs~~i~~Ge 694 (1050)
.++..........++..+..++.+.++..+.......... ......|.|+|+||+|+|+.+. .++|+|+||+|++|+
T Consensus 303 sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~--~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~ 380 (1228)
T KOG0055|consen 303 SLGQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGR--VLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQ 380 (1228)
T ss_pred hhhccccchHHHhccccchHHHHHHhcCCCCCCcccccCC--cccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCC
Confidence 2222223333445566778888887764333211111111 1123467899999999997542 479999999999999
Q ss_pred EEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCC-CCHHHHH
Q 001580 695 KVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLW 773 (1050)
Q Consensus 695 ~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~ 773 (1050)
.+||||||||||||++++|.|+|+|++|+|.+||.|+++++.+++|++||+|.|+|.||++||+|||.++.+ .+++++.
T Consensus 381 ~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~ 460 (1228)
T KOG0055|consen 381 TVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIE 460 (1228)
T ss_pred EEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999998874 5899999
Q ss_pred HHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcE
Q 001580 774 EALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCT 853 (1050)
Q Consensus 774 ~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~t 853 (1050)
++++.+++++|+..+|+||+|.+||+|.+|||||||||||||||+++|+|||||||||+||+++++.++++|++..+|+|
T Consensus 461 ~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grT 540 (1228)
T KOG0055|consen 461 EAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRT 540 (1228)
T ss_pred HHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHhh
Q 001580 854 MLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 902 (1050)
Q Consensus 854 vi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~ 902 (1050)
.|+||||++++++||+|+||++|+|+|.|+|+||++.. |.|..+++.+
T Consensus 541 TivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q 588 (1228)
T KOG0055|consen 541 TIVVAHRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQ 588 (1228)
T ss_pred EEEEeeehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHH
Confidence 99999999999999999999999999999999999987 8999998764
No 26
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=5.9e-71 Score=666.15 Aligned_cols=455 Identities=23% Similarity=0.377 Sum_probs=341.9
Q ss_pred CcEEEEeEEEEeCCC-CCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCC-----CCCCeeE----------
Q 001580 40 PAISIRNGYFSWDSK-AERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP-----VSDASAV---------- 103 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~-~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~-----~~g~~~~---------- 103 (1050)
++|+++|++++|+.. ..+++|+|+||++++||+++|+||||||||||+++|+|+++| ++|.+..
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 83 (529)
T PRK15134 4 PLLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASE 83 (529)
T ss_pred ceEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCH
Confidence 369999999999632 135799999999999999999999999999999999999986 5665421
Q ss_pred -----E-eCcEEEEecCCC--CC-cccHHHHhccCC----CCCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCC
Q 001580 104 -----I-RGTVAYVPQVSW--IF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGV 166 (1050)
Q Consensus 104 -----~-~~~i~~v~Q~~~--l~-~~TV~eni~~g~----~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~ 166 (1050)
. +..|||++|++. ++ ..|+.+|+.++. .... ++...+++..++.+... .......
T Consensus 84 ~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~--------~~~~~~~ 155 (529)
T PRK15134 84 QTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAK--------RLTDYPH 155 (529)
T ss_pred HHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHH--------HHhhCCc
Confidence 0 135999999985 43 469999986421 1111 22333444444432110 1223446
Q ss_pred CCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhhh-cCEEEEEcCCeE
Q 001580 167 NISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMV 244 (1050)
Q Consensus 167 ~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~~-~d~i~~l~~G~i 244 (1050)
+|||||||||+|||||+.+|++|||||||++||+.+++++++.+.+...+ |+|+|+||||++++.. ||||++|++|++
T Consensus 156 ~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i 235 (529)
T PRK15134 156 QLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRC 235 (529)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEE
Confidence 89999999999999999999999999999999999999999988776544 8999999999999875 799999999999
Q ss_pred eeccChhhhhcChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhc
Q 001580 245 KEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERET 324 (1050)
Q Consensus 245 ~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (1050)
++.|+++++..... . .
T Consensus 236 ~~~g~~~~~~~~~~----------------------------------~-------------------~----------- 251 (529)
T PRK15134 236 VEQNRAATLFSAPT----------------------------------H-------------------P----------- 251 (529)
T ss_pred EEeCCHHHHhhCCC----------------------------------C-------------------H-----------
Confidence 98777654321000 0 0
Q ss_pred ccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 325 GVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYW 404 (1050)
Q Consensus 325 ~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 404 (1050)
+
T Consensus 252 ----------~--------------------------------------------------------------------- 252 (529)
T PRK15134 252 ----------Y--------------------------------------------------------------------- 252 (529)
T ss_pred ----------H---------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 405 LIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSL 484 (1050)
Q Consensus 405 ~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (1050)
.+ . +
T Consensus 253 ----------------------------------------------~~----~----~---------------------- 256 (529)
T PRK15134 253 ----------------------------------------------TQ----K----L---------------------- 256 (529)
T ss_pred ----------------------------------------------HH----H----H----------------------
Confidence 00 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001580 485 WAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGAN 564 (1050)
Q Consensus 485 ~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (1050)
+ . ..
T Consensus 257 ----------------~----~------~~-------------------------------------------------- 260 (529)
T PRK15134 257 ----------------L----N------SE-------------------------------------------------- 260 (529)
T ss_pred ----------------H----H------hC--------------------------------------------------
Confidence 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 001580 565 RWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELP 644 (1050)
Q Consensus 565 ~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~ 644 (1050)
.+ .. +
T Consensus 261 ----------------------------------------------------------------------~~----~~-~ 265 (529)
T PRK15134 261 ----------------------------------------------------------------------PS----GD-P 265 (529)
T ss_pred ----------------------------------------------------------------------cc----cc-c
Confidence 00 00 0
Q ss_pred CCCccccCCCCCCCCCCCCccEEEEEEEEEeCC---------CCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhc
Q 001580 645 SEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP---------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFR 715 (1050)
Q Consensus 645 ~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~---------~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g 715 (1050)
. .+ . . +....++++|++++|+. +..++|+|+||+|++||++||+||||||||||+++|+|
T Consensus 266 ~-~~----~---~---~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~G 334 (529)
T PRK15134 266 V-PL----P---E---PASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLR 334 (529)
T ss_pred c-cc----C---C---CCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 0 00 0 0 01124899999999952 12369999999999999999999999999999999999
Q ss_pred cccCCccEEEECCeecCCCChHH---HhhheEEEcCCc--cccc-ccHHHhcccCC----C-CCHHHHHHHHHHhcHHHH
Q 001580 716 IVELERGRILIDGFDIAKFGLMD---LRKILGIIPQSP--VLFS-GTVRFNLDPFS----E-HSDADLWEALERAHLKDA 784 (1050)
Q Consensus 716 ~~~p~~G~i~~~g~~i~~~~~~~---~r~~i~~v~Q~~--~lf~-~tv~~nl~~~~----~-~~~~~~~~~l~~~~~~~~ 784 (1050)
++ |++|+|.++|.++...+... +|++++|+||++ .++. .|+++|+.+.. . ....+. ...+.++
T Consensus 335 l~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~~ 408 (529)
T PRK15134 335 LI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQR-----EQQVIAV 408 (529)
T ss_pred cC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHH-----HHHHHHH
Confidence 98 48999999999987765443 467899999998 3665 49999986421 0 111111 1123344
Q ss_pred HHHccCCcc-hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCc
Q 001580 785 IRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRL 861 (1050)
Q Consensus 785 i~~~p~gl~-t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~ 861 (1050)
++.+ |+. ........+|||||||||+|||||+.+|++|||||||++||+.+.+.+++.|+++. .++|||+|||++
T Consensus 409 l~~~--~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~ 486 (529)
T PRK15134 409 MEEV--GLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDL 486 (529)
T ss_pred HHHc--CCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCH
Confidence 4443 554 24556677899999999999999999999999999999999999999999999864 378999999999
Q ss_pred hhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 001580 862 NTIID-CDRILLLDSGRVLEYDTPEELLSNE 891 (1050)
Q Consensus 862 ~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 891 (1050)
+++.. ||+|++|++|++++.|+++++...+
T Consensus 487 ~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 517 (529)
T PRK15134 487 HVVRALCHQVIVLRQGEVVEQGDCERVFAAP 517 (529)
T ss_pred HHHHHhcCeEEEEECCEEEEEcCHHHHhcCC
Confidence 99876 9999999999999999999997643
No 27
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=4.7e-71 Score=666.10 Aligned_cols=438 Identities=27% Similarity=0.435 Sum_probs=335.4
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCC--CCCCCCeeEE---------------
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGEL--PPVSDASAVI--------------- 104 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~--~~~~g~~~~~--------------- 104 (1050)
|+++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|++ +|++|.+...
T Consensus 1 l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFD---GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEEC---CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 57899999995 357999999999999999999999999999999999996 6887754321
Q ss_pred ------------------------------eCcEEEEecC-CCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhC
Q 001580 105 ------------------------------RGTVAYVPQV-SWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTS 145 (1050)
Q Consensus 105 ------------------------------~~~i~~v~Q~-~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~ 145 (1050)
+..++|++|+ +.++ ..||+||+.++.. ... +++...++..+
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g 157 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQ 157 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC
Confidence 2248999997 5565 5799999987421 221 22333455555
Q ss_pred cHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEec
Q 001580 146 LQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVT 224 (1050)
Q Consensus 146 l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvt 224 (1050)
+.+..+ ....+|||||||||+|||||+.+|++|||||||++||+.+++++.+.+.+... .|+|+|+||
T Consensus 158 l~~~~~-----------~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivt 226 (520)
T TIGR03269 158 LSHRIT-----------HIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTS 226 (520)
T ss_pred Chhhhh-----------cCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe
Confidence 543332 23468999999999999999999999999999999999999999998877644 489999999
Q ss_pred cCcchhhh-cCEEEEEcCCeEeeccChhhhhcChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCcc
Q 001580 225 NQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEA 303 (1050)
Q Consensus 225 H~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (1050)
||++++.. ||+|++|++|+++..|+++++...
T Consensus 227 Hd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~----------------------------------------------- 259 (520)
T TIGR03269 227 HWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV----------------------------------------------- 259 (520)
T ss_pred CCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH-----------------------------------------------
Confidence 99999875 799999999998765544321100
Q ss_pred ccccccccccchhhhhhhhhcccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHH
Q 001580 304 SDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFY 383 (1050)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 383 (1050)
T Consensus 260 -------------------------------------------------------------------------------- 259 (520)
T TIGR03269 260 -------------------------------------------------------------------------------- 259 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHH
Q 001580 384 NTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFM 463 (1050)
Q Consensus 384 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~ 463 (1050)
..
T Consensus 260 ------------------------------------------------------------~~------------------ 261 (520)
T TIGR03269 260 ------------------------------------------------------------FM------------------ 261 (520)
T ss_pred ------------------------------------------------------------HH------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHH
Q 001580 464 GQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMA 543 (1050)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~ 543 (1050)
. . +
T Consensus 262 ------------------------------------------~---------------~----~---------------- 264 (520)
T TIGR03269 262 ------------------------------------------E---------------G----V---------------- 264 (520)
T ss_pred ------------------------------------------h---------------h----c----------------
Confidence 0 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 544 DINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRL 623 (1050)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~ 623 (1050)
T Consensus 265 -------------------------------------------------------------------------------- 264 (520)
T TIGR03269 265 -------------------------------------------------------------------------------- 264 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCC---CCCCceeeeeEEecCCcEEEEEC
Q 001580 624 ASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP---ELPPVLHGLSFTIPPSDKVGIVG 700 (1050)
Q Consensus 624 ~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~---~~~~~l~~vs~~i~~Ge~~~ivG 700 (1050)
.+... +...+ .....++++|++++|++ +..++|+|+||+|++||++||+|
T Consensus 265 -----------~~~~~----~~~~~------------~~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G 317 (520)
T TIGR03269 265 -----------SEVEK----ECEVE------------VGEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVG 317 (520)
T ss_pred -----------hhhcc----ccccC------------CCCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEEC
Confidence 00000 00000 00124999999999952 22369999999999999999999
Q ss_pred CCCCCHHHHHHHHhccccCCccEEEEC-Cee---cCCCCh---HHHhhheEEEcCCcccccc-cHHHhcccCC--CCCHH
Q 001580 701 RTGAGKSSMLNTLFRIVELERGRILID-GFD---IAKFGL---MDLRKILGIIPQSPVLFSG-TVRFNLDPFS--EHSDA 770 (1050)
Q Consensus 701 ~~GsGKSTll~~l~g~~~p~~G~i~~~-g~~---i~~~~~---~~~r~~i~~v~Q~~~lf~~-tv~~nl~~~~--~~~~~ 770 (1050)
|||||||||+++|+|+++|++|+|.++ |.+ +...++ ..+|++|+|+||++.+|.. |+.+|+.+.. .....
T Consensus 318 ~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~ 397 (520)
T TIGR03269 318 TSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDE 397 (520)
T ss_pred CCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHH
Confidence 999999999999999999999999996 643 333322 2456789999999988865 9999996321 11111
Q ss_pred HHHHHHHHhcHHHHHHHccCCcch-----hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHH
Q 001580 771 DLWEALERAHLKDAIRRNSLGLDA-----QVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTI 845 (1050)
Q Consensus 771 ~~~~~l~~~~~~~~i~~~p~gl~t-----~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l 845 (1050)
+. ...+.++++.+ |+.. .......+|||||||||+|||||+.+|+||||||||++||+.+.+.+.+.|
T Consensus 398 ~~-----~~~~~~~l~~~--~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l 470 (520)
T TIGR03269 398 LA-----RMKAVITLKMV--GFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSI 470 (520)
T ss_pred HH-----HHHHHHHHHhC--CCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 10 11223344443 3422 345666789999999999999999999999999999999999999999999
Q ss_pred HHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 846 REEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 846 ~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
+++. .+.|||+|||+++++.. ||++++|++|++++.|+++++.+
T Consensus 471 ~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 471 LKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred HHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 8864 37899999999999977 99999999999999999988754
No 28
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-71 Score=664.65 Aligned_cols=446 Identities=22% Similarity=0.330 Sum_probs=336.7
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------------eC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RG 106 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------~~ 106 (1050)
+.|+++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|.+... +.
T Consensus 4 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 80 (510)
T PRK09700 4 PYISMAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQL 80 (510)
T ss_pred ceEEEeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHC
Confidence 4699999999996 3579999999999999999999999999999999999999998865421 13
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCC-----C-----CHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSA-----F-----EPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 171 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~-----~-----~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGG 171 (1050)
.|+||+|++.++ ..||+||+.++.. . +.. +....++..++.+ .......+||||
T Consensus 81 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgG 149 (510)
T PRK09700 81 GIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKV-----------DLDEKVANLSIS 149 (510)
T ss_pred CeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCCHH
Confidence 599999998876 6799999987531 0 111 1122222222221 123445689999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccCh
Q 001580 172 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTF 250 (1050)
Q Consensus 172 qrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 250 (1050)
|||||+|||||+.+|++|||||||++||+.++.++++.+.+...+|+|+|+||||++++.. ||++++|++|++++.|++
T Consensus 150 ~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (510)
T PRK09700 150 HKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMV 229 (510)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecch
Confidence 9999999999999999999999999999999999999887766568999999999999875 799999999999877765
Q ss_pred hhhhcChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhcccccHH
Q 001580 251 EDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFK 330 (1050)
Q Consensus 251 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (1050)
+++.... ....
T Consensus 230 ~~~~~~~-----~~~~---------------------------------------------------------------- 240 (510)
T PRK09700 230 SDVSNDD-----IVRL---------------------------------------------------------------- 240 (510)
T ss_pred hhCCHHH-----HHHH----------------------------------------------------------------
Confidence 4432100 0000
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 331 VLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSL 410 (1050)
Q Consensus 331 ~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 410 (1050)
T Consensus 241 -------------------------------------------------------------------------------- 240 (510)
T PRK09700 241 -------------------------------------------------------------------------------- 240 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 411 YAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPL 490 (1050)
Q Consensus 411 ~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 490 (1050)
+
T Consensus 241 ---------------------------------~---------------------------------------------- 241 (510)
T PRK09700 241 ---------------------------------M---------------------------------------------- 241 (510)
T ss_pred ---------------------------------h----------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 001580 491 LLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIR 570 (1050)
Q Consensus 491 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (1050)
+ .+
T Consensus 242 ----------~-------------~~------------------------------------------------------ 244 (510)
T PRK09700 242 ----------V-------------GR------------------------------------------------------ 244 (510)
T ss_pred ----------c-------------CC------------------------------------------------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccc
Q 001580 571 LEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLV 650 (1050)
Q Consensus 571 ~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~ 650 (1050)
.. ..+ ....... +
T Consensus 245 ---------------------~~----------------------------------------~~~---~~~~~~~-~-- 257 (510)
T PRK09700 245 ---------------------EL----------------------------------------QNR---FNAMKEN-V-- 257 (510)
T ss_pred ---------------------Cc----------------------------------------ccc---ccccccc-c--
Confidence 00 000 0000000 0
Q ss_pred cCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCee
Q 001580 651 IESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFD 730 (1050)
Q Consensus 651 ~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~ 730 (1050)
. .. .....++++|+++.|. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.+
T Consensus 258 ---~-~~---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~ 326 (510)
T PRK09700 258 ---S-NL---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKD 326 (510)
T ss_pred ---c-cC---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEE
Confidence 0 00 0112499999999762 38999999999999999999999999999999999999999999999999
Q ss_pred cCCCCh-HHHhhheEEEcCCc---ccccc-cHHHhcccCCCCC----HH--HH-HHHHHHhcHHHHHHHccCCcc-hhhh
Q 001580 731 IAKFGL-MDLRKILGIIPQSP---VLFSG-TVRFNLDPFSEHS----DA--DL-WEALERAHLKDAIRRNSLGLD-AQVS 797 (1050)
Q Consensus 731 i~~~~~-~~~r~~i~~v~Q~~---~lf~~-tv~~nl~~~~~~~----~~--~~-~~~l~~~~~~~~i~~~p~gl~-t~v~ 797 (1050)
+...++ ..+|+.++|+||++ .+|.. |+++|+.+..... .. .. ........+.++++.+ |+. ....
T Consensus 327 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~ 404 (510)
T PRK09700 327 ISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELL--ALKCHSVN 404 (510)
T ss_pred CCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhc--CCCCCCcc
Confidence 866544 34567899999984 46654 9999987531100 00 00 0000112234455553 453 3456
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeC
Q 001580 798 EAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDS 875 (1050)
Q Consensus 798 ~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~ 875 (1050)
....+|||||||||+|||||+.+|+||||||||++||+.+.+.+.+.|+++. ++.|||+|||+++.+.. ||++++|++
T Consensus 405 ~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~ 484 (510)
T PRK09700 405 QNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCE 484 (510)
T ss_pred CccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEEC
Confidence 6667899999999999999999999999999999999999999999998864 47899999999999877 999999999
Q ss_pred CEEEEecCh
Q 001580 876 GRVLEYDTP 884 (1050)
Q Consensus 876 G~i~~~g~~ 884 (1050)
|++++.++.
T Consensus 485 G~i~~~~~~ 493 (510)
T PRK09700 485 GRLTQILTN 493 (510)
T ss_pred CEEEEEecC
Confidence 999988765
No 29
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.1e-67 Score=647.09 Aligned_cols=501 Identities=24% Similarity=0.357 Sum_probs=398.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 001580 388 SLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVS 467 (1050)
Q Consensus 388 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~ 467 (1050)
+++.++..++.++..++....+.+....++..+++++++.|..+|++.+.|++++|+++|+..+...+...+..++..++
T Consensus 72 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~ 151 (582)
T PRK11176 72 IGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGA 151 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555677777888888888889999999999999999999999999999999999999999998877666666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHH
Q 001580 468 QLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADING 547 (1050)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~ 547 (1050)
.++.++++++++.+...++++.++++.+++.....+..++..+........+.+.+.|.++|+++||+|+.++.+.+.+.
T Consensus 152 ~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~ 231 (582)
T PRK11176 152 SIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFD 231 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHH
Confidence 66666666666655544444433333334444444444444455555567788899999999999999999988887777
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH---HHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 548 KSMDKNIRYTLVNMGANRWLAIRLEIVGGL---MIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLA 624 (1050)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~ 624 (1050)
+..+...+..........+......++..+ ++++++.+.+.. +..+ .+.+..++++...+..++..+....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~-g~is-----~g~~~~~~~~~~~~~~pl~~l~~~~ 305 (582)
T PRK11176 232 KVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM-DTLT-----AGTITVVFSSMIALMRPLKSLTNVN 305 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCC-----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766665555444333333333333332222 222222222322 2222 1222233444555667777777888
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCC
Q 001580 625 SLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGA 704 (1050)
Q Consensus 625 ~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~Gs 704 (1050)
...+....+.+|+.++++.+++.+.. ... ..+..+.|+++||+|+|+++.+++|+|+||+|+|||++||+|+|||
T Consensus 306 ~~~~~~~~~~~ri~~~~~~~~~~~~~---~~~--~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGs 380 (582)
T PRK11176 306 AQFQRGMAACQTLFAILDLEQEKDEG---KRV--IERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGS 380 (582)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcCCCC---CcC--CCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCC
Confidence 88888999999999998766542211 011 1123346999999999976545799999999999999999999999
Q ss_pred CHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCC--CCCHHHHHHHHHHhcHH
Q 001580 705 GKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLK 782 (1050)
Q Consensus 705 GKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~--~~~~~~~~~~l~~~~~~ 782 (1050)
|||||+++|+|+++|++|+|++||.|+++++..++|++|+||||++.+|++||++||.++. ..++++++++++.++++
T Consensus 381 GKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~ 460 (582)
T PRK11176 381 GKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAM 460 (582)
T ss_pred CHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcH
Confidence 9999999999999999999999999999999999999999999999999999999998753 36899999999999999
Q ss_pred HHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCch
Q 001580 783 DAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLN 862 (1050)
Q Consensus 783 ~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~ 862 (1050)
++++++|.|+||.+|++|.+||||||||++|||||+++|+|||||||||+||+++++.+.+.|.+..+++|+|+||||++
T Consensus 461 ~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~ 540 (582)
T PRK11176 461 DFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS 540 (582)
T ss_pred HHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999878899999999999
Q ss_pred hhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 001580 863 TIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 900 (1050)
Q Consensus 863 ~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~ 900 (1050)
.+..||+|++|++|++++.|+|++++++. +.|+.++.
T Consensus 541 ~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~-~~y~~l~~ 577 (582)
T PRK11176 541 TIEKADEILVVEDGEIVERGTHAELLAQN-GVYAQLHK 577 (582)
T ss_pred HHHhCCEEEEEECCEEEEeCCHHHHHhCC-ChHHHHHH
Confidence 99999999999999999999999999874 57777765
No 30
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.7e-67 Score=656.39 Aligned_cols=533 Identities=24% Similarity=0.348 Sum_probs=402.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 346 LILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLF--YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHS 423 (1050)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 423 (1050)
...+++.++...+....|.++...+|........... +..+++++.+...++.+++.++....+.+...+++..+++|
T Consensus 150 ~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 229 (694)
T TIGR03375 150 RDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKADLILSAKLFER 229 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555556666677777666654322221111 22233334555778888999999999999999999999999
Q ss_pred HHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 424 ILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQS 503 (1050)
Q Consensus 424 ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~ 503 (1050)
++++|+.| .++++|++++|+ +|++.+...+.......+..+..++..+++++++++...++.+..+++++++..++.+
T Consensus 230 ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~ 307 (694)
T TIGR03375 230 VLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQR 307 (694)
T ss_pred HhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 788999999999 7999998876655444444444444444444455544433333333333333334444
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH----HhHHHHHHHHHHHHHHH
Q 001580 504 TAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMG----ANRWLAIRLEIVGGLMI 579 (1050)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~ 579 (1050)
..++..+......+...+.+.|.++|+++||+|+.++.+.+.+.+......+....... ...+..+...+...+++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 387 (694)
T TIGR03375 308 PLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIV 387 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444555667788899999999999999999988777776665554433333222 22222222222222222
Q ss_pred HHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCC
Q 001580 580 WLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPG 659 (1050)
Q Consensus 580 ~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~ 659 (1050)
++ +.+.+. .+..+. +.+..++.+...+..++..+......+.....+.+|+.++++.+++.+... .....
T Consensus 388 ~~-g~~~v~-~g~ls~-----G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~---~~~~~ 457 (694)
T TIGR03375 388 VV-GVYLIS-DGELTM-----GGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGT---RFLHR 457 (694)
T ss_pred HH-HHHHHH-cCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC---CCCCC
Confidence 22 333333 233221 112223334445566777777777888889999999999998776532111 10111
Q ss_pred CCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH
Q 001580 660 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL 739 (1050)
Q Consensus 660 ~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~ 739 (1050)
.+..+.|+++||+|+|++..+++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|.+||+|++++++.++
T Consensus 458 ~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~l 537 (694)
T TIGR03375 458 PRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADL 537 (694)
T ss_pred CCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHH
Confidence 12345799999999997544579999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheEEEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHc
Q 001580 740 RKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 818 (1050)
Q Consensus 740 r~~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall 818 (1050)
|++|+||||++.+|++||+|||.++.+ .++++++++++.++++++++.+|.|++|.+|++|.+||||||||++||||++
T Consensus 538 r~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall 617 (694)
T TIGR03375 538 RRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALL 617 (694)
T ss_pred HhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999998765 6899999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 819 RRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 819 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
++|+|||||||||+||+++++.+++.|.+..+++|+|+||||++++..||+|++|++|++++.|+|+||+++
T Consensus 618 ~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 618 RDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 999999999999999999999999999998889999999999999999999999999999999999999864
No 31
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.2e-70 Score=654.01 Aligned_cols=450 Identities=24% Similarity=0.406 Sum_probs=341.8
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------------eC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RG 106 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------~~ 106 (1050)
+.|+++|++|+|+. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|.+... +.
T Consensus 10 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 86 (510)
T PRK15439 10 PLLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQL 86 (510)
T ss_pred ceEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhC
Confidence 46999999999963 569999999999999999999999999999999999999998865431 12
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCCCCH---HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSAFEP---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 182 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~~~~---~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL 182 (1050)
.+||++|++.++ ..||+||+.++..... ++....++..++... ......+|||||||||+|||||
T Consensus 87 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~aL 155 (510)
T PRK15439 87 GIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLD-----------LDSSAGSLEVADRQIVEILRGL 155 (510)
T ss_pred CEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcc-----------ccCChhhCCHHHHHHHHHHHHH
Confidence 499999999876 6799999998743221 223333444443321 2334568999999999999999
Q ss_pred ccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcChHHHH
Q 001580 183 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNGELFQ 261 (1050)
Q Consensus 183 ~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~ 261 (1050)
+.+|++|||||||++||+.+++++++.+.+...+|+|+|++|||++++.. ||+|++|++|++++.|+++++.... ..+
T Consensus 156 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~-~~~ 234 (510)
T PRK15439 156 MRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD-IIQ 234 (510)
T ss_pred HcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH-HHH
Confidence 99999999999999999999999999887765568999999999999865 7999999999999888776543110 000
Q ss_pred HHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhcccccHHHHHHHHHHhhh
Q 001580 262 KLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDALGG 341 (1050)
Q Consensus 262 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~ 341 (1050)
.+. ... .
T Consensus 235 ~~~---------------~~~--------~-------------------------------------------------- 241 (510)
T PRK15439 235 AIT---------------PAA--------R-------------------------------------------------- 241 (510)
T ss_pred HHh---------------Ccc--------c--------------------------------------------------
Confidence 000 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 342 LWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 421 (1050)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 421 (1050)
T Consensus 242 -------------------------------------------------------------------------------- 241 (510)
T PRK15439 242 -------------------------------------------------------------------------------- 241 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 422 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 501 (1050)
Q Consensus 422 ~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~ 501 (1050)
T Consensus 242 -------------------------------------------------------------------------------- 241 (510)
T PRK15439 242 -------------------------------------------------------------------------------- 241 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 001580 502 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWL 581 (1050)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 581 (1050)
.. .. .
T Consensus 242 ---~~---~~---~------------------------------------------------------------------ 246 (510)
T PRK15439 242 ---EK---SL---S------------------------------------------------------------------ 246 (510)
T ss_pred ---cc---cc---c------------------------------------------------------------------
Confidence 00 00 0
Q ss_pred HHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCC
Q 001580 582 TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 661 (1050)
Q Consensus 582 ~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~ 661 (1050)
..++.. ...+...+ . .. +
T Consensus 247 ---------------------------------------------------~~~~~~--~~~~~~~~-----~-~~---~ 264 (510)
T PRK15439 247 ---------------------------------------------------ASQKLW--LELPGNRR-----Q-QA---A 264 (510)
T ss_pred ---------------------------------------------------cccccc--cccccccc-----c-cC---C
Confidence 000000 00000000 0 00 0
Q ss_pred CCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH-Hh
Q 001580 662 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LR 740 (1050)
Q Consensus 662 ~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~-~r 740 (1050)
....++++|+++ .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++.. .|
T Consensus 265 ~~~~l~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 337 (510)
T PRK15439 265 GAPVLTVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLA 337 (510)
T ss_pred CCceEEEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHh
Confidence 112489999983 2699999999999999999999999999999999999999999999999998766654 45
Q ss_pred hheEEEcCCc---ccccc-cHHHhcccC--C--CC--CHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhHHH
Q 001580 741 KILGIIPQSP---VLFSG-TVRFNLDPF--S--EH--SDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 741 ~~i~~v~Q~~---~lf~~-tv~~nl~~~--~--~~--~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~q 809 (1050)
+.|+|+||++ .+|.. |+.+|+... . .. .... ....+.++++.+ |+. .........|||||||
T Consensus 338 ~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~~LSgG~kq 410 (510)
T PRK15439 338 RGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAR-----ENAVLERYRRAL--NIKFNHAEQAARTLSGGNQQ 410 (510)
T ss_pred CCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHH-----HHHHHHHHHHHc--CCCCCCccCccccCCcHHHH
Confidence 6799999986 36654 999998421 0 00 1111 112234555554 554 3456667889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 887 (1050)
||+|||||+.+|+||||||||+|||+.+.+.+.+.|+++. +++|||+|||+++++.. ||++++|++|+++..|+++++
T Consensus 411 rl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~ 490 (510)
T PRK15439 411 KVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAI 490 (510)
T ss_pred HHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 9999999999999999999999999999999999999864 47899999999999987 999999999999999988876
Q ss_pred h
Q 001580 888 L 888 (1050)
Q Consensus 888 ~ 888 (1050)
.
T Consensus 491 ~ 491 (510)
T PRK15439 491 N 491 (510)
T ss_pred C
Confidence 4
No 32
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2e-70 Score=657.22 Aligned_cols=442 Identities=21% Similarity=0.339 Sum_probs=336.1
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------------eC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RG 106 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------~~ 106 (1050)
+.|+++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|.+... +.
T Consensus 3 ~~i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 79 (501)
T PRK10762 3 ALLQLKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEA 79 (501)
T ss_pred ceEEEeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhC
Confidence 3689999999996 2579999999999999999999999999999999999999998865431 23
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCCC-------CHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSAF-------EPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 174 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~~-------~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrq 174 (1050)
.++|++|++.++ ..||+||+.++... +.. +....++..++.+ .......+|||||||
T Consensus 80 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~q 148 (501)
T PRK10762 80 GIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRF-----------SSDKLVGELSIGEQQ 148 (501)
T ss_pred CEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCC-----------CccCchhhCCHHHHH
Confidence 599999998776 67999999886321 111 1122222222221 123345689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhh
Q 001580 175 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 253 (1050)
Q Consensus 175 Rv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 253 (1050)
||+|||||+.+|++|||||||++||+.++.++++.+.+....|.|+|++|||++++.. ||+|++|++|++++.|+.+++
T Consensus 149 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (501)
T PRK10762 149 MVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADL 228 (501)
T ss_pred HHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcC
Confidence 9999999999999999999999999999999999887765568999999999999875 799999999998876654332
Q ss_pred hcChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhcccccHHHHH
Q 001580 254 SNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLS 333 (1050)
Q Consensus 254 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (1050)
.... ...
T Consensus 229 ~~~~-----~~~-------------------------------------------------------------------- 235 (501)
T PRK10762 229 TEDS-----LIE-------------------------------------------------------------------- 235 (501)
T ss_pred CHHH-----HHH--------------------------------------------------------------------
Confidence 1000 000
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 334 RYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAA 413 (1050)
Q Consensus 334 ~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 413 (1050)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T PRK10762 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 414 KRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLL 493 (1050)
Q Consensus 414 ~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~ 493 (1050)
.+
T Consensus 236 -----------------------------~~------------------------------------------------- 237 (501)
T PRK10762 236 -----------------------------MM------------------------------------------------- 237 (501)
T ss_pred -----------------------------Hh-------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 001580 494 FYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI 573 (1050)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (1050)
.
T Consensus 238 -------~------------------------------------------------------------------------ 238 (501)
T PRK10762 238 -------V------------------------------------------------------------------------ 238 (501)
T ss_pred -------c------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCC
Q 001580 574 VGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIES 653 (1050)
Q Consensus 574 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~ 653 (1050)
.. +.. ..++..+
T Consensus 239 ----------------~~--------------------------------------------~~~---~~~~~~~----- 250 (501)
T PRK10762 239 ----------------GR--------------------------------------------KLE---DQYPRLD----- 250 (501)
T ss_pred ----------------CC--------------------------------------------Ccc---ccccccc-----
Confidence 00 000 0000000
Q ss_pred CCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC
Q 001580 654 NRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK 733 (1050)
Q Consensus 654 ~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~ 733 (1050)
.. +....++++|+++ ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 251 --~~---~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~ 318 (501)
T PRK10762 251 --KA---PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVT 318 (501)
T ss_pred --cC---CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCC
Confidence 00 0112488999984 37999999999999999999999999999999999999999999999999876
Q ss_pred CChH-HHhhheEEEcCCc---cccc-ccHHHhcccCCC--CCH--HHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCC
Q 001580 734 FGLM-DLRKILGIIPQSP---VLFS-GTVRFNLDPFSE--HSD--ADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENF 803 (1050)
Q Consensus 734 ~~~~-~~r~~i~~v~Q~~---~lf~-~tv~~nl~~~~~--~~~--~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~L 803 (1050)
.++. .+|+++||+||++ .++. .|+++|+.+... ... ...........+.++++.+ |+. .........|
T Consensus 319 ~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~L 396 (501)
T PRK10762 319 RSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLF--NIKTPSMEQAIGLL 396 (501)
T ss_pred CCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhc--CCCCCCccCchhhC
Confidence 6653 3567899999997 3554 599999964210 000 0000000112234555553 452 3456667789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEe
Q 001580 804 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY 881 (1050)
Q Consensus 804 SgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~ 881 (1050)
||||||||+|||||+.+|+||||||||++||+.+.+.+.+.|+++. +|+|||++||+++++.. ||+|++|++|+++..
T Consensus 397 SgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~ 476 (501)
T PRK10762 397 SGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGE 476 (501)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999999865 47899999999999877 999999999999999
Q ss_pred cChhHH
Q 001580 882 DTPEEL 887 (1050)
Q Consensus 882 g~~~el 887 (1050)
|+++++
T Consensus 477 ~~~~~~ 482 (501)
T PRK10762 477 FTREQA 482 (501)
T ss_pred eccccC
Confidence 988765
No 33
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-69 Score=650.82 Aligned_cols=201 Identities=17% Similarity=0.334 Sum_probs=169.5
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|. +++|
T Consensus 319 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-----------~~i~ 385 (530)
T PRK15064 319 ALEVENLTKGFDNG--PLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN-----------ANIG 385 (530)
T ss_pred eEEEEeeEEeeCCc--eeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc-----------eEEE
Confidence 59999999999643 6999999999999999999999999999999999999999999999872 4799
Q ss_pred EEcCCcc--ccc-ccHHHhcccCC--CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 745 IIPQSPV--LFS-GTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 745 ~v~Q~~~--lf~-~tv~~nl~~~~--~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
|+||++. ++. .|+++|+..+. ...++++.+.++..++. .........+||||||||++||||++.
T Consensus 386 ~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LSgGq~qrv~la~al~~ 455 (530)
T PRK15064 386 YYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFS----------QDDIKKSVKVLSGGEKGRMLFGKLMMQ 455 (530)
T ss_pred EEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCC----------hhHhcCcccccCHHHHHHHHHHHHHhc
Confidence 9999974 443 49999986432 11233344444444331 123445567899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEE-EecChhHHhhc
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVL-EYDTPEELLSN 890 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~-~~g~~~el~~~ 890 (1050)
+|+||||||||++||+.+...+++.|++. ++|||+|||+++++.. ||++++|++|+++ ..|++++++..
T Consensus 456 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 456 KPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 99999999999999999999999999885 5699999999999987 9999999999998 77999988754
No 34
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-70 Score=652.02 Aligned_cols=445 Identities=21% Similarity=0.304 Sum_probs=333.8
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRG 106 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~ 106 (1050)
+.|+++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. ++.
T Consensus 3 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 79 (501)
T PRK11288 3 PYLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAA 79 (501)
T ss_pred ceEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhC
Confidence 46999999999963 46999999999999999999999999999999999999999887542 124
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCC------CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSA------FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 175 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~------~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqR 175 (1050)
.|||++|++.++ ..||+||+.++.. .+.. +....++..++.. .......+||||||||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGq~qr 148 (501)
T PRK11288 80 GVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDI-----------DPDTPLKYLSIGQRQM 148 (501)
T ss_pred CEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCC-----------CcCCchhhCCHHHHHH
Confidence 599999999876 5799999988631 1111 1222223322211 1233457899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhh
Q 001580 176 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 176 v~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
|+|||||+.+|++|||||||++||+.+++++++.+.+...+|+|+|+||||++++.. ||+|++|++|+++..++..+..
T Consensus 149 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 228 (501)
T PRK11288 149 VEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQV 228 (501)
T ss_pred HHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccC
Confidence 999999999999999999999999999999999887765568999999999999865 7999999999987533210000
Q ss_pred cChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhcccccHHHHHH
Q 001580 255 NNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSR 334 (1050)
Q Consensus 255 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (1050)
.. +
T Consensus 229 ~~---------------------------------------------------------------~-------------- 231 (501)
T PRK11288 229 DR---------------------------------------------------------------D-------------- 231 (501)
T ss_pred CH---------------------------------------------------------------H--------------
Confidence 00 0
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 335 YKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAK 414 (1050)
Q Consensus 335 y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 414 (1050)
T Consensus 232 -------------------------------------------------------------------------------- 231 (501)
T PRK11288 232 -------------------------------------------------------------------------------- 231 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 415 RLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLF 494 (1050)
Q Consensus 415 ~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~ 494 (1050)
.+ .
T Consensus 232 -----------------------------------~~-------~----------------------------------- 234 (501)
T PRK11288 232 -----------------------------------QL-------V----------------------------------- 234 (501)
T ss_pred -----------------------------------HH-------H-----------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 001580 495 YAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIV 574 (1050)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (1050)
. .. .
T Consensus 235 -----------~---~~---~----------------------------------------------------------- 238 (501)
T PRK11288 235 -----------Q---AM---V----------------------------------------------------------- 238 (501)
T ss_pred -----------H---Hh---c-----------------------------------------------------------
Confidence 0 00 0
Q ss_pred HHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCC
Q 001580 575 GGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESN 654 (1050)
Q Consensus 575 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~ 654 (1050)
... ..+ ..... + .
T Consensus 239 ---------------~~~-----------------------------------------~~~---~~~~~---~-----~ 251 (501)
T PRK11288 239 ---------------GRE-----------------------------------------IGD---IYGYR---P-----R 251 (501)
T ss_pred ---------------CCC-----------------------------------------ccc---ccccc---c-----c
Confidence 000 000 00000 0 0
Q ss_pred CCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCC
Q 001580 655 RPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF 734 (1050)
Q Consensus 655 ~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~ 734 (1050)
. +....++++|+++. .+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...
T Consensus 252 --~---~~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~ 320 (501)
T PRK11288 252 --P---LGEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIR 320 (501)
T ss_pred --C---CCCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCC
Confidence 0 01123889999742 489999999999999999999999999999999999999999999999998654
Q ss_pred ChH-HHhhheEEEcCCcc---ccc-ccHHHhcccCCCCC--H-H-HHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCC
Q 001580 735 GLM-DLRKILGIIPQSPV---LFS-GTVRFNLDPFSEHS--D-A-DLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFS 804 (1050)
Q Consensus 735 ~~~-~~r~~i~~v~Q~~~---lf~-~tv~~nl~~~~~~~--~-~-~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LS 804 (1050)
++. ..|+.++|+||++. +|. .|+.+|+.+..... . . ..........+.++++.+ |+. ........+||
T Consensus 321 ~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~LS 398 (501)
T PRK11288 321 SPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSL--NIKTPSREQLIMNLS 398 (501)
T ss_pred CHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhc--CcccCCccCccccCC
Confidence 433 45678999999973 554 69999986531100 0 0 000000111234455553 442 33455667899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 805 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 805 gGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
|||||||+|||||+.+|+||||||||+|||+.+.+.+++.|+++. .+.|||+||||++++.. ||++++|++|++++.|
T Consensus 399 gGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~ 478 (501)
T PRK11288 399 GGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGEL 478 (501)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEE
Confidence 999999999999999999999999999999999999999998865 47899999999999977 9999999999999999
Q ss_pred ChhHHh
Q 001580 883 TPEELL 888 (1050)
Q Consensus 883 ~~~el~ 888 (1050)
+++++.
T Consensus 479 ~~~~~~ 484 (501)
T PRK11288 479 AREQAT 484 (501)
T ss_pred ccccCC
Confidence 988754
No 35
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=8.7e-70 Score=652.43 Aligned_cols=448 Identities=20% Similarity=0.299 Sum_probs=333.0
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCC--CCCCeeE-------------EeC
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPP--VSDASAV-------------IRG 106 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~--~~g~~~~-------------~~~ 106 (1050)
|+++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++| ++|.+.. .+.
T Consensus 2 l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFG---GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeC---CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 78999999996 35799999999999999999999999999999999999986 5666532 123
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCCC-------CHHH----HHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSAF-------EPAR----YEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 174 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~~-------~~~~----~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrq 174 (1050)
.+|||+|++.++ ..||+||+.++... +... ....++..++... .......+|||||||
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~~q 148 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDAD----------NVTRPVGDYGGGQQQ 148 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCC----------cccCchhhCCHHHHH
Confidence 599999998776 67999999876321 1111 1122222222110 011234689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhh
Q 001580 175 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 253 (1050)
Q Consensus 175 Rv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 253 (1050)
||+|||||+.+|++|||||||++||+.++.++++.+.+...+|+|+|+||||++++.. ||+|++|++|+++..|+.+++
T Consensus 149 rv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (500)
T TIGR02633 149 LVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTM 228 (500)
T ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccC
Confidence 9999999999999999999999999999999999887766668999999999999875 799999999998765432111
Q ss_pred hcChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhcccccHHHHH
Q 001580 254 SNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLS 333 (1050)
Q Consensus 254 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (1050)
... .
T Consensus 229 ~~~-~--------------------------------------------------------------------------- 232 (500)
T TIGR02633 229 SED-D--------------------------------------------------------------------------- 232 (500)
T ss_pred CHH-H---------------------------------------------------------------------------
Confidence 000 0
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 334 RYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAA 413 (1050)
Q Consensus 334 ~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~ 413 (1050)
T Consensus 233 -------------------------------------------------------------------------------- 232 (500)
T TIGR02633 233 -------------------------------------------------------------------------------- 232 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 414 KRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLL 493 (1050)
Q Consensus 414 ~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~ 493 (1050)
+ +. . +
T Consensus 233 ------------------------------~------~~----~----~------------------------------- 237 (500)
T TIGR02633 233 ------------------------------I------IT----M----M------------------------------- 237 (500)
T ss_pred ------------------------------H------HH----H----H-------------------------------
Confidence 0 00 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 001580 494 FYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI 573 (1050)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (1050)
.
T Consensus 238 -------~------------------------------------------------------------------------ 238 (500)
T TIGR02633 238 -------V------------------------------------------------------------------------ 238 (500)
T ss_pred -------h------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCC
Q 001580 574 VGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIES 653 (1050)
Q Consensus 574 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~ 653 (1050)
+.. ... ..+.. + .
T Consensus 239 ----------------~~~--------------------------------------------~~~--~~~~~-~----~ 251 (500)
T TIGR02633 239 ----------------GRE--------------------------------------------ITS--LYPHE-P----H 251 (500)
T ss_pred ----------------Ccc--------------------------------------------ccc--ccccc-c----c
Confidence 000 000 00000 0 0
Q ss_pred CCCCCCCCCCccEEEEEEEEEeCCC-CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-CccEEEECCeec
Q 001580 654 NRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-ERGRILIDGFDI 731 (1050)
Q Consensus 654 ~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-~~G~i~~~g~~i 731 (1050)
+ +....++++|++++|+.+ ..++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++
T Consensus 252 --~----~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~ 325 (500)
T TIGR02633 252 --E----IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPV 325 (500)
T ss_pred --C----CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEEC
Confidence 0 011248999999999421 23699999999999999999999999999999999999996 899999999998
Q ss_pred CCCCh-HHHhhheEEEcCCc---cccc-ccHHHhcccCCC--CCH-HHHHHHHHHhcHHHHHHHccCCcch-hhhcCCCC
Q 001580 732 AKFGL-MDLRKILGIIPQSP---VLFS-GTVRFNLDPFSE--HSD-ADLWEALERAHLKDAIRRNSLGLDA-QVSEAGEN 802 (1050)
Q Consensus 732 ~~~~~-~~~r~~i~~v~Q~~---~lf~-~tv~~nl~~~~~--~~~-~~~~~~l~~~~~~~~i~~~p~gl~t-~v~~~~~~ 802 (1050)
...+. ..+|++++|+||++ .+|. .|+++|+.+... ... ..+........+.++++.+ |+.. ........
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~ 403 (500)
T TIGR02633 326 DIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRL--KVKTASPFLPIGR 403 (500)
T ss_pred CCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhc--CccCCCccCcccc
Confidence 65443 45678899999996 3665 499999975310 000 0000011112234455554 3432 24555678
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEE
Q 001580 803 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 880 (1050)
Q Consensus 803 LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 880 (1050)
||||||||++|||||+.+|++|||||||++||+.+.+.+++.|+++. ++.|||+||||++++.. ||++++|++|+++.
T Consensus 404 LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~ 483 (500)
T TIGR02633 404 LSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKG 483 (500)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998864 47899999999999977 99999999999998
Q ss_pred ecChhHH
Q 001580 881 YDTPEEL 887 (1050)
Q Consensus 881 ~g~~~el 887 (1050)
.++.+++
T Consensus 484 ~~~~~~~ 490 (500)
T TIGR02633 484 DFVNHAL 490 (500)
T ss_pred EEccccC
Confidence 7765443
No 36
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-68 Score=652.99 Aligned_cols=264 Identities=19% Similarity=0.271 Sum_probs=189.1
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.|+++||+++|++. ++|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|.+++. .++|
T Consensus 312 ~l~~~~l~~~y~~~--~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ig 378 (638)
T PRK10636 312 LLKMEKVSAGYGDR--IILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLG 378 (638)
T ss_pred eEEEEeeEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEE
Confidence 59999999999643 6999999999999999999999999999999999999999999999741 2699
Q ss_pred EEcCCc--cccc-ccHHHhcccCC-CCCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 745 IIPQSP--VLFS-GTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 745 ~v~Q~~--~lf~-~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
|+||++ .++. .|+.+++.... .....++.+ ++..+ |+. .........|||||||||+|||+|+.
T Consensus 379 y~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~L~~~--~l~~~~~~~~~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 379 YFAQHQLEFLRADESPLQHLARLAPQELEQKLRD---------YLGGF--GFQGDKVTEETRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EecCcchhhCCccchHHHHHHHhCchhhHHHHHH---------HHHHc--CCChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 999985 2433 37777763211 112223333 33332 332 23445567899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEE-EecChhHHhhcC-CChHH
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVL-EYDTPEELLSNE-GSSFS 896 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~-~~g~~~el~~~~-~~~~~ 896 (1050)
+|+||||||||++||+.+...+.+.|+++ ++|||+||||++++.. ||+|++|++|+++ ..|+++++.... ...-.
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~ 525 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQWLSDVQKQ 525 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHHHHhhhhhh
Confidence 99999999999999999999999999986 4699999999999987 9999999999997 679999985421 00000
Q ss_pred HHHH---h--hccch---HHHHHHHhhc-ccchhhhhhhhhccchhhhHHHhhHHHHHhccchhhcc
Q 001580 897 KMVQ---S--TGAAN---AQYLRSLVLG-GEAENKLREENKQIDGQRRWLASSRWAAAAQYALAVSL 954 (1050)
Q Consensus 897 ~~~~---~--~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1050)
.... . ..... .......... .....+.+++.+.+|.++..++....++.++++.+..+
T Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~i~~le~~~~~l~~~l~~~~~~ 592 (638)
T PRK10636 526 ENQTDEAPKENNANSAQARKDQKRREAELRTQTQPLRKEIARLEKEMEKLNAQLAQAEEKLGDSELY 592 (638)
T ss_pred hhhhccccccccccccccchhhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhc
Confidence 0000 0 00000 0000000000 00011122344568888888888888888888766543
No 37
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5.5e-69 Score=630.26 Aligned_cols=488 Identities=25% Similarity=0.351 Sum_probs=341.1
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEEeC-cEEEEecCCCCC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRG-TVAYVPQVSWIF 118 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~~~-~i~~v~Q~~~l~ 118 (1050)
..|.++|++++|+ ++++|+++||++.+|+++||||+|||||||||++|+|...|++|.+...++ +|||++|++.+.
T Consensus 2 ~~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~ 78 (530)
T COG0488 2 SMITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLD 78 (530)
T ss_pred ceEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcC
Confidence 4689999999995 578999999999999999999999999999999999999999988776554 799999999987
Q ss_pred -cccHHHHhccCCCCCH---HHHHHHHH---------HhCcH------------HH-HhcCCCCCcccccCCCCCCCHHH
Q 001580 119 -NATVRDNILFGSAFEP---ARYEKAID---------VTSLQ------------HD-LDLLPGGDVTEIGERGVNISGGQ 172 (1050)
Q Consensus 119 -~~TV~eni~~g~~~~~---~~~~~~~~---------~~~l~------------~~-~~~~~~g~~t~vg~~g~~LSGGq 172 (1050)
..||.+.+..+...-. .+++.... ...+. .. ...+.+-..+.......+|||||
T Consensus 79 ~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~~~~~~~LSGG~ 158 (530)
T COG0488 79 PEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDEDRPVSSLSGGW 158 (530)
T ss_pred CCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcccCchhhcCHHH
Confidence 6699999987632100 01111100 00000 00 01111111111133457899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEe-eccCh
Q 001580 173 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVK-EEGTF 250 (1050)
Q Consensus 173 rqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~-~~g~~ 250 (1050)
|.||+||+||..+||+|||||||||||.+++.|+.++|.+.. | |+|+||||++||+. |++|+.++.|++. +.|.|
T Consensus 159 r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~--g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny 235 (530)
T COG0488 159 RRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYP--G-TVIVVSHDRYFLDNVATHILELDRGKLTPYKGNY 235 (530)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCC--C-cEEEEeCCHHHHHHHhhheEEecCCceeEecCCH
Confidence 999999999999999999999999999999999999987544 5 99999999999998 5999999999765 57777
Q ss_pred hhhhcChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhcccccHH
Q 001580 251 EDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFK 330 (1050)
Q Consensus 251 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (1050)
+.+....+.........
T Consensus 236 ~~~~~~r~~~~~~~~~~--------------------------------------------------------------- 252 (530)
T COG0488 236 SSYLEQKAERLRQEAAA--------------------------------------------------------------- 252 (530)
T ss_pred HHHHHHHHHHHHHHHHH---------------------------------------------------------------
Confidence 76553321110000000
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 331 VLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSL 410 (1050)
Q Consensus 331 ~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 410 (1050)
T Consensus 253 -------------------------------------------------------------------------------- 252 (530)
T COG0488 253 -------------------------------------------------------------------------------- 252 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 411 YAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPL 490 (1050)
Q Consensus 411 ~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 490 (1050)
T Consensus 253 -------------------------------------------------------------------------------- 252 (530)
T COG0488 253 -------------------------------------------------------------------------------- 252 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 001580 491 LLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIR 570 (1050)
Q Consensus 491 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (1050)
+.+..++. .+..++++....-+.-
T Consensus 253 ----------~~~~~~~~------------~~~~~~i~r~~~~~~~---------------------------------- 276 (530)
T COG0488 253 ----------YEKQQKEL------------AKEQEWIRRGKAAASK---------------------------------- 276 (530)
T ss_pred ----------HHHHHHHH------------HHHHHHHHHHHhccch----------------------------------
Confidence 00000000 0000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hcCCCCCc
Q 001580 571 LEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNY--IELPSEAP 648 (1050)
Q Consensus 571 ~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~--~~~~~e~~ 648 (1050)
....+.....++++... ...|....
T Consensus 277 -----------------------------------------------------~k~a~sr~k~l~k~~~~~~~~~~~~~~ 303 (530)
T COG0488 277 -----------------------------------------------------AKKAKSRIKRLEKLEARLAEERPVEEG 303 (530)
T ss_pred -----------------------------------------------------HHHHHHHHHHHHHHHhhhhhccccccc
Confidence 00000001111111110 01111100
Q ss_pred cccCCCCCCCC-CCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEEC
Q 001580 649 LVIESNRPPPG-WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILID 727 (1050)
Q Consensus 649 ~~~~~~~~~~~-~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~ 727 (1050)
....-..+++. ...+..++++|++++|+++ +++++++||.|.+|+++||+||||+|||||+++|+|...|.+|+|.++
T Consensus 304 ~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g 382 (530)
T COG0488 304 KPLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVG 382 (530)
T ss_pred ccceeeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeC
Confidence 00000011111 1223458999999999654 479999999999999999999999999999999999999999999987
Q ss_pred CeecCCCChHHHhhheEEEcCCcc-ccc-ccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCC
Q 001580 728 GFDIAKFGLMDLRKILGIIPQSPV-LFS-GTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 804 (1050)
Q Consensus 728 g~~i~~~~~~~~r~~i~~v~Q~~~-lf~-~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LS 804 (1050)
-. -++||++|+.. ++. .|+.+++....+ ..+.+++..|.+.++... . +......||
T Consensus 383 ~~-----------v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~---------~-~~~~v~~LS 441 (530)
T COG0488 383 ET-----------VKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE---------D-QEKPVGVLS 441 (530)
T ss_pred Cc-----------eEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH---------H-HhCchhhcC
Confidence 31 36999999983 443 389888864432 235566666666554332 2 234456799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEe-c
Q 001580 805 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY-D 882 (1050)
Q Consensus 805 gGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~-g 882 (1050)
||||.||.||+.++.+|++||||||||+||.++...+.++|.+ ..+|||+||||.++++. |++|+++++ ++..+ |
T Consensus 442 GGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~--f~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g 518 (530)
T COG0488 442 GGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLD--FEGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEG 518 (530)
T ss_pred HhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCC
Confidence 9999999999999999999999999999999999999999998 68899999999999998 999999999 77776 9
Q ss_pred ChhHHhhc
Q 001580 883 TPEELLSN 890 (1050)
Q Consensus 883 ~~~el~~~ 890 (1050)
+++++.+.
T Consensus 519 ~y~~y~~~ 526 (530)
T COG0488 519 GYEDYLEQ 526 (530)
T ss_pred CHHHHHHh
Confidence 99998764
No 38
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.9e-66 Score=643.59 Aligned_cols=542 Identities=23% Similarity=0.327 Sum_probs=407.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccccCCC-Chh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 347 ILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-GPL-FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSI 424 (1050)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~-~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l 424 (1050)
..+++.++...+....|.++....|....... ... .+...+.++.+...++.+++.++....+.+...+++..+++++
T Consensus 143 ~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l 222 (694)
T TIGR01846 143 EVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHL 222 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555566666666665432211 111 2223344455567788899999999999999999999999999
Q ss_pred HcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 425 LRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQST 504 (1050)
Q Consensus 425 l~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~ 504 (1050)
+++|+.||+++++|++++|+ +|++.+...+.......+..+...+..+++++++++...++++..+++++.+..+..+.
T Consensus 223 ~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~ 301 (694)
T TIGR01846 223 LGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPI 301 (694)
T ss_pred HcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 69999987765544444433333333344444555544443333333333333333333
Q ss_pred HHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHHHH
Q 001580 505 AREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIV---GGLMIWL 581 (1050)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~ 581 (1050)
.++..+......++..+.+.|+++|+++||+++.++++.+.+.+..+...+..........+.......+ ..+++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 381 (694)
T TIGR01846 302 LRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLW 381 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 3333333334556778899999999999999999988877777666655444433333333333222222 2222222
Q ss_pred HHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCC
Q 001580 582 TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 661 (1050)
Q Consensus 582 ~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~ 661 (1050)
++.+.+. .+..+.. .+..+..+...+..++..+.......+....+.+|+.++++.+++.... .... ...
T Consensus 382 ~g~~lv~-~g~it~G-----~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~--~~~~--~~~ 451 (694)
T TIGR01846 382 FGAHLVI-GGALSPG-----QLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA--GLAA--LPE 451 (694)
T ss_pred HHHHHHH-cCCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC--CCCC--CCC
Confidence 2333332 2222211 1122333444566677777778888889999999999999877653211 1001 112
Q ss_pred CCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhh
Q 001580 662 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 741 (1050)
Q Consensus 662 ~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~ 741 (1050)
..+.|+++||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|++||+|+++++..++|+
T Consensus 452 ~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~ 531 (694)
T TIGR01846 452 LRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRR 531 (694)
T ss_pred CCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHH
Confidence 24579999999999755457999999999999999999999999999999999999999999999999999999999999
Q ss_pred heEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 742 ILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 742 ~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
+|+||||++.+|++|++|||.++. ..++++++++++.++++++++++|.|++|.++++|.+||||||||++||||++++
T Consensus 532 ~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~ 611 (694)
T TIGR01846 532 QMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGN 611 (694)
T ss_pred hCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhC
Confidence 999999999999999999998764 4688999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 900 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~ 900 (1050)
|+|||||||||+||+++++.+.+.|++..+++|+|+||||++++..||+|++|++|++++.|+|++++++. +.|.+++.
T Consensus 612 ~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~~-~~y~~l~~ 690 (694)
T TIGR01846 612 PRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQ-GLYARLWQ 690 (694)
T ss_pred CCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHcC-ChHHHHHH
Confidence 99999999999999999999999999987889999999999999999999999999999999999999864 67887765
No 39
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=7.4e-66 Score=630.02 Aligned_cols=543 Identities=23% Similarity=0.364 Sum_probs=421.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 345 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPL--FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLH 422 (1050)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 422 (1050)
+++.+++.++...+....+.++....+.......... .+..++.++.+...++.+++.++....+.+....++..+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~ 95 (571)
T TIGR02203 16 LVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFE 95 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445555555555556666554443222111111 22234555666677888889999999999999999999999
Q ss_pred HHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 423 SILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQ 502 (1050)
Q Consensus 423 ~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~ 502 (1050)
++++.|..+|++.+.|++++|+++|+..+...+...+..++..+..++..+++++++++...+++++++++.+.....+.
T Consensus 96 ~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~ 175 (571)
T TIGR02203 96 KLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVS 175 (571)
T ss_pred HHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877776777677777777666666666665555555555555555555
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH---HHHH
Q 001580 503 STAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVG---GLMI 579 (1050)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~ 579 (1050)
+..++..+......++..+.+.|.++|+.+||+++.++++.+.+.+..+...+..........+......++. .+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (571)
T TIGR02203 176 KRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVV 255 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555566666778889999999999999999999988777777666555544443333333333222222 2222
Q ss_pred HHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCC
Q 001580 580 WLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPG 659 (1050)
Q Consensus 580 ~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~ 659 (1050)
++++.+.+. .+..+. +.+..++.++..+..++..+............+.+|+.++++.+++.+.. ..+.
T Consensus 256 ~~~g~~~~~-~g~lt~-----g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~-- 324 (571)
T TIGR02203 256 LFIALFQAQ-AGSLTA-----GDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG---TRAI-- 324 (571)
T ss_pred HHHHHHHHH-cCCCCH-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCC--
Confidence 222222222 232221 22223334455666777777778888889999999999998765543211 1111
Q ss_pred CCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH
Q 001580 660 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL 739 (1050)
Q Consensus 660 ~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~ 739 (1050)
.+..+.++++||+|+|++..+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|++||+++.+++..++
T Consensus 325 ~~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~ 404 (571)
T TIGR02203 325 ERARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASL 404 (571)
T ss_pred CCCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHH
Confidence 12235699999999997544579999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheEEEcCCcccccccHHHhcccCC--CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 740 RKILGIIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 740 r~~i~~v~Q~~~lf~~tv~~nl~~~~--~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
|++|+||||+|.+|++|+++||.++. +.++++++++++.+++++++.++|.|+||.+++.|.+||||||||++||||+
T Consensus 405 ~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARal 484 (571)
T TIGR02203 405 RRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARAL 484 (571)
T ss_pred HhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999774 4789999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSK 897 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 897 (1050)
+++|+|||||||||+||+++++.+.+.|++..+++|+|+||||.+.+..||+|++|++|++++.|+|++++++. +.|..
T Consensus 485 l~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~-~~~~~ 563 (571)
T TIGR02203 485 LKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARN-GLYAQ 563 (571)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcC-CHHHH
Confidence 99999999999999999999999999999988899999999999999899999999999999999999998764 45665
Q ss_pred HH
Q 001580 898 MV 899 (1050)
Q Consensus 898 ~~ 899 (1050)
.+
T Consensus 564 ~~ 565 (571)
T TIGR02203 564 LH 565 (571)
T ss_pred HH
Confidence 44
No 40
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-66 Score=583.05 Aligned_cols=531 Identities=24% Similarity=0.333 Sum_probs=380.1
Q ss_pred HHHHHHhhhhhhhhhccccccC------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 001580 355 TETLRVSSSTWLSYWTDQSSLK------THGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAP 428 (1050)
Q Consensus 355 ~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p 428 (1050)
+..+.+..|..+...++..... ...+.-.+..|.+..++..++..++.+++....++..++...++|++++.+.
T Consensus 42 aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld 121 (591)
T KOG0057|consen 42 AKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLD 121 (591)
T ss_pred hhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3455555555554444332211 1122344566778888899999999999999999999999999999999999
Q ss_pred chhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 001580 429 MVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQST-ARE 507 (1050)
Q Consensus 429 ~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~-~~~ 507 (1050)
+.+|.+..+|.+.+.+..-...+...+...+..++..++.+......+.+-.......+....+..|.++..+... ..+
T Consensus 122 ~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~ 201 (591)
T KOG0057|consen 122 LSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNR 201 (591)
T ss_pred HHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHH
Confidence 9999999999998888777777766555555555555444443332222222111112222222333333222111 122
Q ss_pred HHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 508 VKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAV 587 (1050)
Q Consensus 508 ~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v 587 (1050)
.++....+.....+...+.+.+..+||+|+.|++..+.+...+....+...........+.+.-..+..........+..
T Consensus 202 fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~ 281 (591)
T KOG0057|consen 202 FRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGS 281 (591)
T ss_pred HHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333344455667788999999999999999999999988888777766655443333333322222111111111100
Q ss_pred --HhcCccchhhhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCC
Q 001580 588 --VQNGSAENQEAFASTMGLLL---SYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPS 662 (1050)
Q Consensus 588 --~~~~~~~~~~~~~~~~g~~l---~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~ 662 (1050)
..++.. ++|-++ ++...+..++..+-..+......+....-+.... +.+.. ..+. +.+....
T Consensus 282 ~gi~~~~m--------tvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~--~~~~~-i~~~--~~~i~~~ 348 (591)
T KOG0057|consen 282 NGIAAGKM--------TVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILL--EVDED-IQEA--ALPIELF 348 (591)
T ss_pred hhhhhccc--------cccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhh--hhhhh-hhhc--cCCcccC
Confidence 011111 122222 2222333333333333322222222222221111 11100 0000 1111223
Q ss_pred CccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhh
Q 001580 663 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKI 742 (1050)
Q Consensus 663 ~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~ 742 (1050)
++.|+|+||+|.|+++ +++|+++||+|++||+|||+|+|||||||++|+|+|+++ ++|+|++||+|+++++++.+|+.
T Consensus 349 ~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~ 426 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQS 426 (591)
T ss_pred CCcEEEEeeEEEeCCC-CceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhh
Confidence 4569999999999865 469999999999999999999999999999999999999 99999999999999999999999
Q ss_pred eEEEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 743 LGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 743 i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
|||||||..||++||.+||.+++. .+++++.++++++++++.+.++|.||+|.+||+|..|||||||||+||||++++|
T Consensus 427 Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda 506 (591)
T KOG0057|consen 427 IGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDA 506 (591)
T ss_pred eeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCC
Confidence 999999999999999999998764 6899999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHh
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 901 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~ 901 (1050)
+|++||||||+||.+||+.+.+.+.....++|+|+|.||+++++.||+|+++++|++.+.|+|+||++ ..+.|..+|..
T Consensus 507 ~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~ 585 (591)
T KOG0057|consen 507 PILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTT 585 (591)
T ss_pred CeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhcc
Confidence 99999999999999999999999999888999999999999999999999999999999999999999 56677777654
No 41
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3.1e-65 Score=624.94 Aligned_cols=544 Identities=22% Similarity=0.298 Sum_probs=391.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 346 LILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSIL 425 (1050)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll 425 (1050)
.+.+++.++...+....+.++....|..... .....+..++.++.+...+..+...++......+....++..++++++
T Consensus 22 ~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ 100 (588)
T PRK13657 22 ILLAVANVLLAAATFAEPILFGRIIDAISGK-GDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERII 100 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555566666666665543221 111112222223333333334444444444455555567779999999
Q ss_pred cCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 426 RAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTA 505 (1050)
Q Consensus 426 ~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~ 505 (1050)
+.|..+|.+.+.|++++|+++|++.+...+...+..++..++..+..+++++.+.+...++++.++++++.+..++.+..
T Consensus 101 ~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~ 180 (588)
T PRK13657 101 QLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRKT 180 (588)
T ss_pred hCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998766555554444444444444444445555444433333333334444444444
Q ss_pred HHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH---HHHHHHHHH
Q 001580 506 REVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI---VGGLMIWLT 582 (1050)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~ 582 (1050)
++..+......+.+.+.+.|.++|+++||+|+.++.+.+.+.+..+...+..........+.....++ +..+++++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (588)
T PRK13657 181 KDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILVL 260 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555566778889999999999999999998877777666665544433322222222222222 222222233
Q ss_pred HHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCC
Q 001580 583 ATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPS 662 (1050)
Q Consensus 583 ~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~ 662 (1050)
+.+.+. .+..+... +..++.++..+..++..+............+.+|+.++++.+++.+.. ... ....+.
T Consensus 261 g~~~v~-~g~lt~g~-----~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~--~~~-~~~~~~ 331 (588)
T PRK13657 261 GAALVQ-KGQLRVGE-----VVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP--PGA-IDLGRV 331 (588)
T ss_pred HHHHHH-cCCcCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC--CCC-CCcCCC
Confidence 333333 33333221 122233334455556666666666667778888888877654332110 010 000112
Q ss_pred CccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhh
Q 001580 663 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKI 742 (1050)
Q Consensus 663 ~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~ 742 (1050)
.+.|+++||+|+|+++ +++|+|+||+++|||++||+|+||||||||+++|+|+++|++|+|++||.++.+++..++|++
T Consensus 332 ~~~I~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~ 410 (588)
T PRK13657 332 KGAVEFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRN 410 (588)
T ss_pred CCeEEEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhh
Confidence 3469999999999743 469999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 743 LGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 743 i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
|+|+||+|.+|++|+++||.++. +.++++++++++.+++.+++.++|.|+||.++++|.+||||||||++|||||+++|
T Consensus 411 i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~ 490 (588)
T PRK13657 411 IAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDP 490 (588)
T ss_pred eEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999874 46789999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHh
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 901 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~ 901 (1050)
+|||||||||+||+++++.+++.|++..+++|+|+||||++.++.||+|++|++|++++.|+|++++++. +.|.+++..
T Consensus 491 ~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~ 569 (588)
T PRK13657 491 PILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARG-GRFAALLRA 569 (588)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCC-ChHHHHHHH
Confidence 9999999999999999999999999887789999999999999999999999999999999999999764 567776653
No 42
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-68 Score=582.12 Aligned_cols=497 Identities=23% Similarity=0.386 Sum_probs=383.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 394 QVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTF 473 (1050)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~ 473 (1050)
+-++.-+++++.....++..+.+.-++|+|+..+++.|.-.+.+|+++.-+......+. .....+......+..+...+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~ 350 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAM 350 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhh
Confidence 34666778888889999999999999999999999999999999999888776666554 34444444444444444443
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHH
Q 001580 474 VLIGIV-STMSLWAIMPLLLLFYAAY-LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMD 551 (1050)
Q Consensus 474 ~~~~~~-~~~~~~~~~~lll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~ 551 (1050)
+..++. .++..++++..++++.... ..-..+.+..+++. .+...-.+.-.+++-+..++|-|++++...+.+.+.+.
T Consensus 351 vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn-~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil 429 (790)
T KOG0056|consen 351 VYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMN-NSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAIL 429 (790)
T ss_pred hhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhh-hhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHH
Confidence 333221 2222222222222211111 11111111111111 11112233457889999999999999999999988888
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH--hcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 552 KNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVV--QNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAEN 629 (1050)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~--~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~ 629 (1050)
..++.....+..-..+...-..+.++-...++.+.+. ..+..+ .+-+.++.+|.+.+..|++.+-.....+++
T Consensus 430 ~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~lt-----VGDfVlf~TYliqLy~PLN~FGT~YR~iQ~ 504 (790)
T KOG0056|consen 430 KYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLT-----VGDFVLFLTYLIQLYMPLNFFGTYYRSIQK 504 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeecccc-----ccceehHHHHHHHHhCchHHHHHHHHHHHH
Confidence 8777766554333333332222222222222222111 011111 122345677888888899999888899999
Q ss_pred HHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHH
Q 001580 630 SLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSM 709 (1050)
Q Consensus 630 ~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTl 709 (1050)
.+..+|++.++++.++|. .+....+|.....|.|+|+||+|.|+++ +++|+||||+++||+.+|+|||||+||||+
T Consensus 505 nfiDmEnmfdllkee~eV---vd~P~a~pl~~~~G~i~fsnvtF~Y~p~-k~vl~disF~v~pGktvAlVG~SGaGKSTi 580 (790)
T KOG0056|consen 505 NFIDMENMFDLLKEEPEV---VDLPGAPPLKVTQGKIEFSNVTFAYDPG-KPVLSDISFTVQPGKTVALVGPSGAGKSTI 580 (790)
T ss_pred hhhhHHHHHHHhhcCchh---hcCCCCCCccccCCeEEEEEeEEecCCC-CceeecceEEecCCcEEEEECCCCCchhHH
Confidence 999999999988654442 2222333333456889999999999876 489999999999999999999999999999
Q ss_pred HHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHc
Q 001580 710 LNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRN 788 (1050)
Q Consensus 710 l~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~ 788 (1050)
+++|.++++.++|.|.+||+||++...+++|++||+||||..||++||..||.+.+. ++++++.+|++++++++-|..+
T Consensus 581 mRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~f 660 (790)
T KOG0056|consen 581 MRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQF 660 (790)
T ss_pred HHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999998754 6899999999999999999999
Q ss_pred cCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcC
Q 001580 789 SLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCD 868 (1050)
Q Consensus 789 p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d 868 (1050)
|+||+|.+||+|-.||||||||||+||+++++|.|++|||+||+||..+++.|+.+|.+...++|.|+|+||++++-+||
T Consensus 661 PegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD 740 (790)
T KOG0056|consen 661 PEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNAD 740 (790)
T ss_pred chhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCEEEEecChhHHhhcCCChHHHHHHh
Q 001580 869 RILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 901 (1050)
Q Consensus 869 ~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~ 901 (1050)
.|+|+++|+|+|.|+|+||+++++|.|..|++.
T Consensus 741 ~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 741 LILVISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred EEEEEeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 999999999999999999999999999999974
No 43
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-68 Score=637.99 Aligned_cols=436 Identities=21% Similarity=0.327 Sum_probs=329.5
Q ss_pred EEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------------eCcEEE
Q 001580 44 IRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGTVAY 110 (1050)
Q Consensus 44 ~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~i~~ 110 (1050)
++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+..- +..++|
T Consensus 1 ~~nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 468999996 3579999999999999999999999999999999999999998865421 235999
Q ss_pred EecCCCCC-cccHHHHhccCCC-C-----CHHH----HHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHH
Q 001580 111 VPQVSWIF-NATVRDNILFGSA-F-----EPAR----YEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 179 (1050)
Q Consensus 111 v~Q~~~l~-~~TV~eni~~g~~-~-----~~~~----~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LA 179 (1050)
++|++.++ ..||+||+.++.. . +... ....++..++. ........+|||||||||+||
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGq~qrv~lA 146 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDID-----------IDPRAKVATLSVSQMQMIEIA 146 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCC-----------CCccCchhhCCHHHHHHHHHH
Confidence 99998775 6799999987631 1 1111 11122222221 122345578999999999999
Q ss_pred HHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcChH
Q 001580 180 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNGE 258 (1050)
Q Consensus 180 raL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 258 (1050)
|||+.+|++|||||||++||+.+++++++.+.+....|+|+|++|||++++.. ||++++|++|++++.|+.+++... .
T Consensus 147 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-~ 225 (491)
T PRK10982 147 KAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD-K 225 (491)
T ss_pred HHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH-H
Confidence 99999999999999999999999999999887765668999999999999875 799999999999876654331100 0
Q ss_pred HHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhcccccHHHHHHHHHH
Q 001580 259 LFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDA 338 (1050)
Q Consensus 259 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 338 (1050)
..
T Consensus 226 ----~~-------------------------------------------------------------------------- 227 (491)
T PRK10982 226 ----II-------------------------------------------------------------------------- 227 (491)
T ss_pred ----HH--------------------------------------------------------------------------
Confidence 00
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 339 LGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHD 418 (1050)
Q Consensus 339 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (1050)
T Consensus 228 -------------------------------------------------------------------------------- 227 (491)
T PRK10982 228 -------------------------------------------------------------------------------- 227 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 419 AMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAY 498 (1050)
Q Consensus 419 ~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~ 498 (1050)
.++
T Consensus 228 -----------------------~~~------------------------------------------------------ 230 (491)
T PRK10982 228 -----------------------AMM------------------------------------------------------ 230 (491)
T ss_pred -----------------------HHH------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 001580 499 LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLM 578 (1050)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 578 (1050)
+
T Consensus 231 --~----------------------------------------------------------------------------- 231 (491)
T PRK10982 231 --V----------------------------------------------------------------------------- 231 (491)
T ss_pred --h-----------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCC
Q 001580 579 IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 658 (1050)
Q Consensus 579 ~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~ 658 (1050)
+.. ..+ ..+... . .
T Consensus 232 -----------~~~-----------------------------------------~~~-----~~~~~~-----~---~- 245 (491)
T PRK10982 232 -----------GRS-----------------------------------------LTQ-----RFPDKE-----N---K- 245 (491)
T ss_pred -----------CCC-----------------------------------------ccc-----cccccc-----C---C-
Confidence 000 000 000000 0 0
Q ss_pred CCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH
Q 001580 659 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 738 (1050)
Q Consensus 659 ~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~ 738 (1050)
+.+..|+++|++++| +++|+|+||+|++||++||+||||||||||+++|+|+.+|++|+|.++|.++...++..
T Consensus 246 --~~~~~i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 319 (491)
T PRK10982 246 --PGEVILEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANE 319 (491)
T ss_pred --CCCcEEEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHH
Confidence 011248999999974 25999999999999999999999999999999999999999999999999998766543
Q ss_pred -HhhheEEEcCCcc---ccc-ccHHHhc-----ccCCC----CCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCC
Q 001580 739 -LRKILGIIPQSPV---LFS-GTVRFNL-----DPFSE----HSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENF 803 (1050)
Q Consensus 739 -~r~~i~~v~Q~~~---lf~-~tv~~nl-----~~~~~----~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~L 803 (1050)
+++.++|+||++. +|. .|+.+|. ..... ...... ...+.++++.+ |+. ........+|
T Consensus 320 ~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~L 392 (491)
T PRK10982 320 AINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRM-----KSDTQWVIDSM--RVKTPGHRTQIGSL 392 (491)
T ss_pred HHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHH-----HHHHHHHHHhc--CccCCCcccccccC
Confidence 4677999999963 555 3776663 21111 011111 11234455554 332 2346667789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEe
Q 001580 804 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY 881 (1050)
Q Consensus 804 SgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~ 881 (1050)
||||||||+||||++.+|+||||||||+|||+.+++.+++.|+++. +++|||+|||+++++.. |||+++|++|+++..
T Consensus 393 SgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~ 472 (491)
T PRK10982 393 SGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGI 472 (491)
T ss_pred CcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998864 58999999999999977 999999999999988
Q ss_pred cChhHH
Q 001580 882 DTPEEL 887 (1050)
Q Consensus 882 g~~~el 887 (1050)
++.+++
T Consensus 473 ~~~~~~ 478 (491)
T PRK10982 473 VDTKTT 478 (491)
T ss_pred EccccC
Confidence 776533
No 44
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.6e-68 Score=639.93 Aligned_cols=442 Identities=24% Similarity=0.340 Sum_probs=329.2
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE------------eCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~------------~~~i 108 (1050)
+|+++|++|+|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+... +..+
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 5899999999963 469999999999999999999999999999999999999998876421 1238
Q ss_pred EEEecCCCC--C-------cccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHH
Q 001580 109 AYVPQVSWI--F-------NATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 179 (1050)
Q Consensus 109 ~~v~Q~~~l--~-------~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LA 179 (1050)
+|++|++.+ + ..||++|+.++.. ..++....++..++.+..+. ...+|||||||||+||
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~la 147 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALLDR-----------RFKYLSTGETRKTLLC 147 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhhhC-----------CcccCCHHHHHHHHHH
Confidence 999998642 1 4689998875421 12344555666665543332 3368999999999999
Q ss_pred HHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcChH
Q 001580 180 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNGE 258 (1050)
Q Consensus 180 raL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 258 (1050)
|||+.+|++|||||||++||+.+++++++.+.+...+|+|+|++|||++++.. ||++++|++|+++..|+++++.....
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 227 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQAL 227 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcchh
Confidence 99999999999999999999999999999887765568999999999999875 79999999999988776554321100
Q ss_pred HHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhcccccHHHHHHHHHH
Q 001580 259 LFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDA 338 (1050)
Q Consensus 259 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 338 (1050)
...+..
T Consensus 228 -~~~~~~------------------------------------------------------------------------- 233 (490)
T PRK10938 228 -VAQLAH------------------------------------------------------------------------- 233 (490)
T ss_pred -hhhhhh-------------------------------------------------------------------------
Confidence 000000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 339 LGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHD 418 (1050)
Q Consensus 339 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (1050)
T Consensus 234 -------------------------------------------------------------------------------- 233 (490)
T PRK10938 234 -------------------------------------------------------------------------------- 233 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 419 AMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAY 498 (1050)
Q Consensus 419 ~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~ 498 (1050)
T Consensus 234 -------------------------------------------------------------------------------- 233 (490)
T PRK10938 234 -------------------------------------------------------------------------------- 233 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 001580 499 LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLM 578 (1050)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 578 (1050)
.+ .+.
T Consensus 234 ------~~-------------------~~~-------------------------------------------------- 238 (490)
T PRK10938 234 ------SE-------------------QLE-------------------------------------------------- 238 (490)
T ss_pred ------hh-------------------ccC--------------------------------------------------
Confidence 00 000
Q ss_pred HHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC-CccccCCCCCC
Q 001580 579 IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSE-APLVIESNRPP 657 (1050)
Q Consensus 579 ~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e-~~~~~~~~~~~ 657 (1050)
. ...+.. .+... .. ..
T Consensus 239 ------------------------------------------------------------~-~~~~~~~~~~~~-~~-~~ 255 (490)
T PRK10938 239 ------------------------------------------------------------G-VQLPEPDEPSAR-HA-LP 255 (490)
T ss_pred ------------------------------------------------------------c-cccCcccccccc-cc-cC
Confidence 0 000000 00000 00 00
Q ss_pred CCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-CccEEEECCeecCC-CC
Q 001580 658 PGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-ERGRILIDGFDIAK-FG 735 (1050)
Q Consensus 658 ~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-~~G~i~~~g~~i~~-~~ 735 (1050)
.....++++|++++|++. .+|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .+
T Consensus 256 ---~~~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~ 330 (490)
T PRK10938 256 ---ANEPRIVLNNGVVSYNDR--PILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGET 330 (490)
T ss_pred ---CCCceEEEeceEEEECCe--eEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCC
Confidence 011249999999999643 699999999999999999999999999999999998876 69999999987632 23
Q ss_pred hHHHhhheEEEcCCccccc---ccHHHhcccC--C------CCCHHHHHHHHHHhcHHHHHHHccCCcch-hhhcCCCCC
Q 001580 736 LMDLRKILGIIPQSPVLFS---GTVRFNLDPF--S------EHSDADLWEALERAHLKDAIRRNSLGLDA-QVSEAGENF 803 (1050)
Q Consensus 736 ~~~~r~~i~~v~Q~~~lf~---~tv~~nl~~~--~------~~~~~~~~~~l~~~~~~~~i~~~p~gl~t-~v~~~~~~L 803 (1050)
....|++|+|+||++.++. .++.+++.+. . ..... .. ..+.+.++. .|+.. .......+|
T Consensus 331 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~l~~--~~l~~~~~~~~~~~L 402 (490)
T PRK10938 331 IWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDR-QQ-----KLAQQWLDI--LGIDKRTADAPFHSL 402 (490)
T ss_pred HHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHH-HH-----HHHHHHHHH--cCCchhhccCchhhC
Confidence 3346788999999986542 3676665321 1 01111 00 112233333 24444 445556789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC-C-cEEEEeecCchhhhh--cCEEEEEeCCEEE
Q 001580 804 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-S-CTMLIIAHRLNTIID--CDRILLLDSGRVL 879 (1050)
Q Consensus 804 SgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~-~-~tvi~vtH~~~~~~~--~d~i~vl~~G~i~ 879 (1050)
|||||||++|||||+.+|+||||||||+|||+.+.+.+.+.|+++.+ + .|||+|||+++++.. ||++++|++|+++
T Consensus 403 SgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~ 482 (490)
T PRK10938 403 SWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIY 482 (490)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceE
Confidence 99999999999999999999999999999999999999999998753 4 479999999999964 8999999999998
Q ss_pred Eec
Q 001580 880 EYD 882 (1050)
Q Consensus 880 ~~g 882 (1050)
+.-
T Consensus 483 ~~~ 485 (490)
T PRK10938 483 RYV 485 (490)
T ss_pred Eee
Confidence 753
No 45
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.8e-67 Score=636.30 Aligned_cols=480 Identities=22% Similarity=0.265 Sum_probs=330.2
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-eCcEEEEecCCCCC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-RGTVAYVPQVSWIF 118 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-~~~i~~v~Q~~~l~ 118 (1050)
++|+++|++++|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|.+... +..||||+|+|.++
T Consensus 5 ~~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~ 82 (556)
T PRK11819 5 YIYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLD 82 (556)
T ss_pred EEEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCC
Confidence 46999999999962 3579999999999999999999999999999999999999998877543 34699999999887
Q ss_pred -cccHHHHhccCCC-CCH--HHH------------------------HHHHHHh-------CcHHHHhcCCCCCcccccC
Q 001580 119 -NATVRDNILFGSA-FEP--ARY------------------------EKAIDVT-------SLQHDLDLLPGGDVTEIGE 163 (1050)
Q Consensus 119 -~~TV~eni~~g~~-~~~--~~~------------------------~~~~~~~-------~l~~~~~~~~~g~~t~vg~ 163 (1050)
..||.||+.++.. +.. ..+ ....+.. .....++.+.- .....
T Consensus 83 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl---~~~~~ 159 (556)
T PRK11819 83 PEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRC---PPWDA 159 (556)
T ss_pred CCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCC---CcccC
Confidence 5699999987521 000 000 0000000 01111122111 11234
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCC
Q 001580 164 RGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEG 242 (1050)
Q Consensus 164 ~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G 242 (1050)
...+|||||||||+|||||+.+|++||||||||+||+.++.++.+.+.+.. .|+|+||||++++.. ||+|++|++|
T Consensus 160 ~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~---~tviiisHd~~~~~~~~d~i~~l~~g 236 (556)
T PRK11819 160 KVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP---GTVVAVTHDRYFLDNVAGWILELDRG 236 (556)
T ss_pred chhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC---CeEEEEeCCHHHHHhhcCeEEEEeCC
Confidence 557899999999999999999999999999999999999999999776543 599999999999986 6999999999
Q ss_pred eEe-eccChhhhhcChHH-HHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhh
Q 001580 243 MVK-EEGTFEDLSNNGEL-FQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQE 320 (1050)
Q Consensus 243 ~i~-~~g~~~~l~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1050)
+++ +.|+++++...... ...... .
T Consensus 237 ~i~~~~g~~~~~~~~~~~~~~~~~~------~------------------------------------------------ 262 (556)
T PRK11819 237 RGIPWEGNYSSWLEQKAKRLAQEEK------Q------------------------------------------------ 262 (556)
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHH------H------------------------------------------------
Confidence 986 67877665422100 000000 0
Q ss_pred hhhcccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHH
Q 001580 321 ERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLA 400 (1050)
Q Consensus 321 ~~~~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~ 400 (1050)
+.
T Consensus 263 --------------~~---------------------------------------------------------------- 264 (556)
T PRK11819 263 --------------EA---------------------------------------------------------------- 264 (556)
T ss_pred --------------HH----------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 401 NSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVS 480 (1050)
Q Consensus 401 ~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1050)
.
T Consensus 265 -------------------------------------------------~------------------------------ 265 (556)
T PRK11819 265 -------------------------------------------------A------------------------------ 265 (556)
T ss_pred -------------------------------------------------H------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 001580 481 TMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVN 560 (1050)
Q Consensus 481 ~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (1050)
.....++. .+.+......+ ..
T Consensus 266 -----------------------~~~~~~~~------------~~~~~~~~~~~---------------------~~--- 286 (556)
T PRK11819 266 -----------------------RQKALKRE------------LEWVRQSPKAR---------------------QA--- 286 (556)
T ss_pred -----------------------HHHHHHHH------------HHHHHHhhhhh---------------------HH---
Confidence 00000000 00000000000 00
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001580 561 MGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNY 640 (1050)
Q Consensus 561 ~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~ 640 (1050)
..+......++..+.
T Consensus 287 -----------------------------------------------------------------~~~~~~~~~~~~~~~ 301 (556)
T PRK11819 287 -----------------------------------------------------------------KSKARLARYEELLSE 301 (556)
T ss_pred -----------------------------------------------------------------HHHHHHHHHHHhhcc
Confidence 000000000010000
Q ss_pred hcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCC
Q 001580 641 IELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE 720 (1050)
Q Consensus 641 ~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~ 720 (1050)
.+.+.+.......+.........++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|+
T Consensus 302 --~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~ 377 (556)
T PRK11819 302 --EYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGDR--LLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPD 377 (556)
T ss_pred --cccccCCCceeecCCCCCCCCeEEEEEeEEEEECCe--eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC
Confidence 000000000000000001112359999999999653 6999999999999999999999999999999999999999
Q ss_pred ccEEEECCeecCCCChHHHhhheEEEcCCc-cccc-ccHHHhcccCCCC-----CHHHHHHHHHHhcHHHHHHHccCCcc
Q 001580 721 RGRILIDGFDIAKFGLMDLRKILGIIPQSP-VLFS-GTVRFNLDPFSEH-----SDADLWEALERAHLKDAIRRNSLGLD 793 (1050)
Q Consensus 721 ~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~-~lf~-~tv~~nl~~~~~~-----~~~~~~~~l~~~~~~~~i~~~p~gl~ 793 (1050)
+|+|.+++ + ..|||+||++ .++. .|+++|+.+.... .+.+.. ..++.+ |+.
T Consensus 378 ~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~---------~~l~~~--~l~ 435 (556)
T PRK11819 378 SGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSR---------AYVGRF--NFK 435 (556)
T ss_pred CeEEEECC-c----------eEEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHH---------HHHHhC--CCC
Confidence 99999954 2 1599999997 5665 4999998653211 111122 233332 443
Q ss_pred h-hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEE
Q 001580 794 A-QVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRIL 871 (1050)
Q Consensus 794 t-~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~ 871 (1050)
. .......+||||||||++||||++.+|++|||||||++||+.+...+++.|++. .+|||+|||+++++.. ||+|+
T Consensus 436 ~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vtHd~~~~~~~~d~i~ 513 (556)
T PRK11819 436 GGDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF--PGCAVVISHDRWFLDRIATHIL 513 (556)
T ss_pred hhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhCCEEE
Confidence 2 245566789999999999999999999999999999999999999999999985 3589999999999887 99999
Q ss_pred EEeC-CEEEE-ecChhHHhhc
Q 001580 872 LLDS-GRVLE-YDTPEELLSN 890 (1050)
Q Consensus 872 vl~~-G~i~~-~g~~~el~~~ 890 (1050)
+|++ |++.. .|+++++.+.
T Consensus 514 ~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 514 AFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred EEECCCeEEEecCCHHHHHHH
Confidence 9986 88874 6888877653
No 46
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=6.6e-67 Score=633.07 Aligned_cols=480 Identities=22% Similarity=0.257 Sum_probs=329.9
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-eCcEEEEecCCCCC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-RGTVAYVPQVSWIF 118 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-~~~i~~v~Q~~~l~ 118 (1050)
..|+++|++++|+. ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+... +..||||+|+|+++
T Consensus 3 ~~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~ 80 (552)
T TIGR03719 3 YIYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLD 80 (552)
T ss_pred EEEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCC
Confidence 46899999999962 3579999999999999999999999999999999999999998876542 34699999999886
Q ss_pred -cccHHHHhccCCCC------------------CH---------HHHHHHHHHhCcH-------HHHhcCCCCCcccccC
Q 001580 119 -NATVRDNILFGSAF------------------EP---------ARYEKAIDVTSLQ-------HDLDLLPGGDVTEIGE 163 (1050)
Q Consensus 119 -~~TV~eni~~g~~~------------------~~---------~~~~~~~~~~~l~-------~~~~~~~~g~~t~vg~ 163 (1050)
+.||+||+.++... .. .++...++.++.. ..++.+.- .....
T Consensus 81 ~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l---~~~~~ 157 (552)
T TIGR03719 81 PTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRC---PPWDA 157 (552)
T ss_pred CCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCC---CcccC
Confidence 67999999875210 00 0111122222211 11222111 11244
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCC
Q 001580 164 RGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEG 242 (1050)
Q Consensus 164 ~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G 242 (1050)
...+|||||||||+|||||+.+|++|||||||++||+.++.++.+.+.+. +.|+|+||||++++.. ||++++|++|
T Consensus 158 ~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~---~~tvIiisHd~~~~~~~~d~v~~l~~g 234 (552)
T TIGR03719 158 DVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY---PGTVVAVTHDRYFLDNVAGWILELDRG 234 (552)
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC---CCeEEEEeCCHHHHHhhcCeEEEEECC
Confidence 56789999999999999999999999999999999999999999977654 3699999999999986 6999999999
Q ss_pred eEe-eccChhhhhcChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhh
Q 001580 243 MVK-EEGTFEDLSNNGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEE 321 (1050)
Q Consensus 243 ~i~-~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1050)
+++ +.|+++++.+.... .......
T Consensus 235 ~i~~~~g~~~~~~~~~~~--~~~~~~~----------------------------------------------------- 259 (552)
T TIGR03719 235 RGIPWEGNYSSWLEQKEK--RLEQEEK----------------------------------------------------- 259 (552)
T ss_pred EEEEecCCHHHHHHHHHH--HHHHHHH-----------------------------------------------------
Confidence 975 67887765421100 0000000
Q ss_pred hhcccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHH
Q 001580 322 RETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLAN 401 (1050)
Q Consensus 322 ~~~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~ 401 (1050)
.+
T Consensus 260 ------------~~------------------------------------------------------------------ 261 (552)
T TIGR03719 260 ------------EE------------------------------------------------------------------ 261 (552)
T ss_pred ------------HH------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 402 SYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVST 481 (1050)
Q Consensus 402 ~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1050)
...
T Consensus 262 -----------------------------------------------~~~------------------------------ 264 (552)
T TIGR03719 262 -----------------------------------------------SAR------------------------------ 264 (552)
T ss_pred -----------------------------------------------HHH------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 482 MSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNM 561 (1050)
Q Consensus 482 ~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~ 561 (1050)
.++..+. .+++..... .... +.
T Consensus 265 -----------------------~~~~~~~------------~~~~~~~~~----~~~~--------------~~----- 286 (552)
T TIGR03719 265 -----------------------QKALKRE------------LEWVRSSPK----ARQA--------------KS----- 286 (552)
T ss_pred -----------------------HHHHHHH------------HHHHHhhhh----hHHH--------------HH-----
Confidence 0000000 000000000 0000 00
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 001580 562 GANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYI 641 (1050)
Q Consensus 562 ~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~ 641 (1050)
.......++..+
T Consensus 287 ------------------------------------------------------------------~~~~~~~~~~~~-- 298 (552)
T TIGR03719 287 ------------------------------------------------------------------KARLARYEELLS-- 298 (552)
T ss_pred ------------------------------------------------------------------HHHHHHHHhhhh--
Confidence 000000000000
Q ss_pred cCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCc
Q 001580 642 ELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER 721 (1050)
Q Consensus 642 ~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~ 721 (1050)
..+...+.......+.........++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~ 376 (552)
T TIGR03719 299 QEFQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGDK--LLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDS 376 (552)
T ss_pred hcccccCCCceeecCCCCCCCCeEEEEeeEEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCC
Confidence 0000000000000000000112359999999999643 69999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCCChHHHhhheEEEcCCcc-ccc-ccHHHhcccCCC---CC--HHHHHHHHHHhcHHHHHHHccCCcch
Q 001580 722 GRILIDGFDIAKFGLMDLRKILGIIPQSPV-LFS-GTVRFNLDPFSE---HS--DADLWEALERAHLKDAIRRNSLGLDA 794 (1050)
Q Consensus 722 G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~-lf~-~tv~~nl~~~~~---~~--~~~~~~~l~~~~~~~~i~~~p~gl~t 794 (1050)
|+|.+++ + ..|||+||++. ++. .|+.+|+.+... .. +.+.. +.+..+ |+..
T Consensus 377 G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~---------~~l~~~--~l~~ 434 (552)
T TIGR03719 377 GTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSR---------AYVGRF--NFKG 434 (552)
T ss_pred eEEEECC-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHH---------HHHHhC--CCCh
Confidence 9999954 2 16999999973 564 499999875321 11 11122 234442 4432
Q ss_pred -hhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEE
Q 001580 795 -QVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILL 872 (1050)
Q Consensus 795 -~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~v 872 (1050)
.......+|||||||||+|||||+.+|++|||||||++||+.+...+.+.|+++ ++|||+|||+++++.. ||+|++
T Consensus 435 ~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~~viivsHd~~~~~~~~d~i~~ 512 (552)
T TIGR03719 435 SDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF--AGCAVVISHDRWFLDRIATHILA 512 (552)
T ss_pred hHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHhCCEEEE
Confidence 245556789999999999999999999999999999999999999999999986 3589999999999987 999999
Q ss_pred EeC-CEEE-EecChhHHhh
Q 001580 873 LDS-GRVL-EYDTPEELLS 889 (1050)
Q Consensus 873 l~~-G~i~-~~g~~~el~~ 889 (1050)
|++ |+++ ..|+++++.+
T Consensus 513 l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 513 FEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred EECCCeEEEeCCCHHHHHH
Confidence 996 6876 4477776643
No 47
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=7.3e-67 Score=640.89 Aligned_cols=263 Identities=20% Similarity=0.250 Sum_probs=189.9
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++||+++|++. ++|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|.+ |.++ .||
T Consensus 319 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDGK--QLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECCe--EEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 48999999999643 6999999999999999999999999999999999999999999998 4322 599
Q ss_pred EEcCCc-ccccc-cHHHhcccCCC-C--C--HHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHHHHHH
Q 001580 745 IIPQSP-VLFSG-TVRFNLDPFSE-H--S--DADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 745 ~v~Q~~-~lf~~-tv~~nl~~~~~-~--~--~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
|++|++ .++.. ||.+|+..... . . ..+ +.+++..+ |+. .........|||||||||+||||
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~---------~~~~l~~~--~l~~~~~~~~~~~LSgGekqRl~la~a 454 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRH---------VLGYLQDF--LFHPKRAMTPVKALSGGERNRLLLARL 454 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHH---------HHHHHHhc--CCCHHHHhChhhhCCHHHHHHHHHHHH
Confidence 999986 46554 99999864321 1 1 112 22333332 332 23445567899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEe-CCEEEEe-cChhHHhhcCCC
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD-SGRVLEY-DTPEELLSNEGS 893 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~-~G~i~~~-g~~~el~~~~~~ 893 (1050)
|+.+|++|||||||++||+.+...+.+.|++. ++|||+||||++++.. ||+|++|+ +|++..+ |++++++.....
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~~~~~ 532 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQQQAQ 532 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHHHHHH
Confidence 99999999999999999999999999999885 5699999999999977 99999998 8999875 899998641100
Q ss_pred hHHHHHHhh-cc-ch--HHH-HHHHhhcccchhhhhhhhhccchhhhHHHhhHHHHHhccchhhcc
Q 001580 894 SFSKMVQST-GA-AN--AQY-LRSLVLGGEAENKLREENKQIDGQRRWLASSRWAAAAQYALAVSL 954 (1050)
Q Consensus 894 ~~~~~~~~~-~~-~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1050)
.-....... .. .. ... ..... ......+..++.+.+|.++..++....++...++.+..|
T Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~~i~~le~~~~~~~~~~~~~~~~ 597 (635)
T PRK11147 533 YLALKQPAVKKKEEAAAPKAETVKRS-SKKLSYKLQRELEQLPQLLEDLEAEIEALQAQVADADFF 597 (635)
T ss_pred HHhhhhhhccccccccccccchhhhh-hhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhh
Confidence 000000000 00 00 000 00000 000011222235667888888888888888888766543
No 48
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=3.6e-65 Score=617.39 Aligned_cols=463 Identities=24% Similarity=0.331 Sum_probs=354.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 001580 390 LSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQL 469 (1050)
Q Consensus 390 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~ 469 (1050)
+.++..++.++..++....+.+...++|.++++++++.|..+|+++++|++++|+++|++.++..+...+..++..+..+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~ 141 (529)
T TIGR02868 62 FGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVG 141 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677778888888888899999999999999999999999999999999999999999988776666666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHH
Q 001580 470 LSTFVLIGIVSTMSLWAIMPLLLL-FYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGK 548 (1050)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~lll~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~ 548 (1050)
+..+++++.+.+...++++..+++ ++....+..+..+...+......+.+.+.+.|.++|+++||+|+.++++.+.+.+
T Consensus 142 ~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~ 221 (529)
T TIGR02868 142 SAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEA 221 (529)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHH
Confidence 666665555555444433332222 2222233333333333344455677889999999999999999999988877776
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH---HHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 549 SMDKNIRYTLVNMGANRWLAIRLEIVGGLM---IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLAS 625 (1050)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~ 625 (1050)
..+...+..........+......++..+. +++.+.+.+. .+..+. ..+..++.+...+..++..+.....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~g~~t~-----g~l~~~~~~~~~~~~~~~~l~~~~~ 295 (529)
T TIGR02868 222 ADRELLAAERRAARATGLGAAAQLLAAGLAVLGALWAGGPAVA-DGTLAP-----ATLAVLVLLPLAAFEAFAPLPAAAQ 295 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCCh-----hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665554443333322222222222222111 1111222222 232221 1222333344456667777777778
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCC
Q 001580 626 LAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAG 705 (1050)
Q Consensus 626 ~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsG 705 (1050)
.......+.+|+.++++.+++.+... ........+..+.|+++||+|+|+++ +++|+|+||+|+|||++||+||||||
T Consensus 296 ~~~~~~~~~~ri~~~l~~~~~~~~~~-~~~~~~~~~~~~~I~~~~vsf~Y~~~-~~vL~~isl~i~~G~~vaIvG~SGsG 373 (529)
T TIGR02868 296 ALTRVRAAAERIEEVTGAKGPRPEGV-VPAAGALGLGKPTLELRDLSFGYPGS-PPVLDGVSLDLPPGERVAILGPSGSG 373 (529)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcCCCC-CCCCcccCCCCceEEEEEEEEecCCC-CceeecceEEEcCCCEEEEECCCCCC
Confidence 88889999999999997765432111 10011112233569999999999754 36999999999999999999999999
Q ss_pred HHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhcHHHH
Q 001580 706 KSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDA 784 (1050)
Q Consensus 706 KSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~ 784 (1050)
||||+++|+|+++|++|+|.+||+|++++ ..++|++|+||||+|.+|++||+|||.++. +.++++++++++.++++++
T Consensus 374 KSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~ 452 (529)
T TIGR02868 374 KSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADW 452 (529)
T ss_pred HHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999999999 999999999999999999999999999865 4689999999999999999
Q ss_pred HHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCc
Q 001580 785 IRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRL 861 (1050)
Q Consensus 785 i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~ 861 (1050)
+.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||+||+++++.|++.|++..+++|+|+||||+
T Consensus 453 i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 453 LRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988899999999985
No 49
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.1e-64 Score=613.20 Aligned_cols=545 Identities=20% Similarity=0.266 Sum_probs=394.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 345 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSI 424 (1050)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l 424 (1050)
+++.+++.++...+....|..++..+|...... ....+..++.++.+...+..++..++......+...+++.++|+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l 99 (585)
T TIGR01192 21 VLLIVIANITLAAITIAEPILFGRIIDAISSKS-DVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATLLTEAFGRI 99 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555666666666666655432211 1111222222223333444444455555555566667778999999
Q ss_pred HcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 425 LRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQST 504 (1050)
Q Consensus 425 l~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~ 504 (1050)
+++|+.||+++++|++++|+++|++.+...+...+...+..++.++.++++++.+.+...++++.++++++.....+.+.
T Consensus 100 ~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~ 179 (585)
T TIGR01192 100 ISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQR 179 (585)
T ss_pred HcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999987776666555555555555545555555544443333333333333444444
Q ss_pred HHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH---HHHHHHHHHH
Q 001580 505 AREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRL---EIVGGLMIWL 581 (1050)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~ 581 (1050)
.++..+......+.+.+.+.|.++|+++||+|+.++...+.+.+..+...+..........+..... ..+..+++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 259 (585)
T TIGR01192 180 TKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCILV 259 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555667788999999999999999999887776666655544333322221111111111 1112222222
Q ss_pred HHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCC
Q 001580 582 TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWP 661 (1050)
Q Consensus 582 ~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~ 661 (1050)
++.+.+. .+..+. +.+..++.++..+..++..+............+.+|+.++.+.+++... ........+
T Consensus 260 ~g~~~v~-~g~it~-----g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~---~~~~~~~~~ 330 (585)
T TIGR01192 260 IGTVLVI-KGELSV-----GEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREE---PADAPELPN 330 (585)
T ss_pred HHHHHHH-cCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CccCCCCCC
Confidence 2333332 232221 1122233344445556666666667777788899999988876543211 111001111
Q ss_pred CCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhh
Q 001580 662 SSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 741 (1050)
Q Consensus 662 ~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~ 741 (1050)
..+.++++||+|+|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.++++..+|+
T Consensus 331 ~~~~i~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~ 409 (585)
T TIGR01192 331 VKGAVEFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRK 409 (585)
T ss_pred CCCeEEEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHh
Confidence 23469999999999753 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred heEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 742 ILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 742 ~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
+++|+||+|.+|++|+++||.++. ..++++++++++.+++++++.++|.|++|.+++++.+|||||||||+|||||+++
T Consensus 410 ~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~ 489 (585)
T TIGR01192 410 SIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKN 489 (585)
T ss_pred heEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999998764 4578899999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHH
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQ 900 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~ 900 (1050)
|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|++++.|++++++++. +.|..++.
T Consensus 490 p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~y~~l~~ 568 (585)
T TIGR01192 490 APILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKD-GRFYKLLR 568 (585)
T ss_pred CCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCC-ChHHHHHH
Confidence 99999999999999999999999999887899999999999999889999999999999999999999864 57777765
Q ss_pred h
Q 001580 901 S 901 (1050)
Q Consensus 901 ~ 901 (1050)
.
T Consensus 569 ~ 569 (585)
T TIGR01192 569 R 569 (585)
T ss_pred h
Confidence 4
No 50
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.1e-64 Score=617.45 Aligned_cols=547 Identities=24% Similarity=0.390 Sum_probs=409.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhccccccCCC-Chh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 345 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-GPL-FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLH 422 (1050)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~-~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 422 (1050)
+.+.+++.++...+....+..+....|....... ... .+..+++++.+...+..+.+.++....+.+....+|..+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~ 99 (576)
T TIGR02204 20 VLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERVVADIRRAVFA 99 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455556666666666666665554221111 111 12223334444556667788888888899999999999999
Q ss_pred HHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 423 SILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQ 502 (1050)
Q Consensus 423 ~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~ 502 (1050)
++++.|..+|++.+.|++++|+++|++.++..+...+..++..+..++..+++++.+.+...++++..+++.+.....+.
T Consensus 100 ~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~ 179 (576)
T TIGR02204 100 HLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFG 179 (576)
T ss_pred HHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999887766665656666666655555555555544443333333333334444
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHH
Q 001580 503 STAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIV---GGLMI 579 (1050)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~ 579 (1050)
+..+...+........+.+.+.|.++|+++||+++.++++...+.+..+..............+.......+ ..+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (576)
T TIGR02204 180 RRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGV 259 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555667788899999999999999999988777776666654443332222222222222211 11122
Q ss_pred HHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCC
Q 001580 580 WLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPG 659 (1050)
Q Consensus 580 ~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~ 659 (1050)
++++.+.+. .+..+. +.+..+..+...+..++..+...+..+.....+.+|+.++++.+++.+..... ....
T Consensus 260 ~~~g~~~v~-~g~lt~-----g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~--~~~~ 331 (576)
T TIGR02204 260 LWVGAHDVI-AGKMSA-----GTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHP--KTLP 331 (576)
T ss_pred HHHHHHHHH-cCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCC--ccCC
Confidence 222222222 232221 12223334455566777778888888889999999999998766542211101 1111
Q ss_pred CCCCccEEEEEEEEEeCCCC-CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH
Q 001580 660 WPSSGSIKFEDVVLRYRPEL-PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 738 (1050)
Q Consensus 660 ~~~~~~i~~~~v~~~y~~~~-~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~ 738 (1050)
++..+.|+++||+|+|+++. +++|+|+||+++|||+++|+|+||||||||+++|+|+++|++|+|++||.+++++++.+
T Consensus 332 ~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~ 411 (576)
T TIGR02204 332 VPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAE 411 (576)
T ss_pred cCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHH
Confidence 12235699999999997532 47999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhheEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 739 LRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+|++|+|+||+|.+|++|+++||.++. +.++++++++++.+++.++++++|.|++|.++++|.+||||||||++||||+
T Consensus 412 ~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal 491 (576)
T TIGR02204 412 LRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAI 491 (576)
T ss_pred HHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999765 3578999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSK 897 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 897 (1050)
+++|++||||||||+||+.+++.+++.|++..+++|+|+||||++.+..||+|++|++|++++.|+|++++++ ++.|..
T Consensus 492 ~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~-~~~~~~ 570 (576)
T TIGR02204 492 LKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK-GGLYAR 570 (576)
T ss_pred HhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc-CChHHH
Confidence 9999999999999999999999999999998789999999999999999999999999999999999999875 456666
Q ss_pred HHH
Q 001580 898 MVQ 900 (1050)
Q Consensus 898 ~~~ 900 (1050)
++.
T Consensus 571 l~~ 573 (576)
T TIGR02204 571 LAR 573 (576)
T ss_pred HHh
Confidence 553
No 51
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.8e-65 Score=617.64 Aligned_cols=504 Identities=21% Similarity=0.288 Sum_probs=379.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 001580 386 IYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQ 465 (1050)
Q Consensus 386 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~ 465 (1050)
+++++.++..++.++..++....+.+...++|..+++++++.|+.+|+++++|++++|+++|+..+...+...+..++..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~ 120 (569)
T PRK10789 41 TMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDS 120 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 34444455666777778888888899999999999999999999999999999999999999999986555444444444
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHH
Q 001580 466 VSQLLSTFVLI-GIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAD 544 (1050)
Q Consensus 466 ~~~~~~~~~~~-~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~ 544 (1050)
+...+..++++ ..+++...++++..+++.+.+...+.+..++..+......+.+.+.+.|.++|++++|+|+.++++.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~ 200 (569)
T PRK10789 121 LVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSA 200 (569)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHH
Confidence 33333333222 23444333332222222233333333333333344444557788899999999999999999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHH---HHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 545 INGKSMDKNIRYTLVNMGANRWLAIRLEI---VGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVL 621 (1050)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~ 621 (1050)
.+.+..+...+..........+....... +..++++.++.+.+. .+..+.. .+..++.+...+..++..+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~-~g~lt~g-----~l~a~~~~~~~~~~pl~~l~ 274 (569)
T PRK10789 201 LFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVV-NGSLTLG-----QLTSFVMYLGLMIWPMLALA 274 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcCHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 77665554443333222222222111111 111222222222222 2322211 11222333344555666666
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECC
Q 001580 622 RLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGR 701 (1050)
Q Consensus 622 ~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~ 701 (1050)
.....+.....+.+|+.++++.+++.+.. .... .+..+.|+++|++|+|++...++|+|+||+++||++++|+||
T Consensus 275 ~~~~~~~~~~~a~~ri~~ll~~~~~~~~~---~~~~--~~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~ 349 (569)
T PRK10789 275 WMFNIVERGSAAYSRIRAMLAEAPVVKDG---SEPV--PEGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGP 349 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccCC---CCCC--CCCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECC
Confidence 77777888889999999998765442111 0011 112356999999999975445799999999999999999999
Q ss_pred CCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhc
Q 001580 702 TGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAH 780 (1050)
Q Consensus 702 ~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~ 780 (1050)
||||||||+++|+|+++|++|+|.+||.++.+++...+|++++|+||+|.+|++|+++||.++. +.++++++++++.++
T Consensus 350 sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~ 429 (569)
T PRK10789 350 TGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLAS 429 (569)
T ss_pred CCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999998774 468899999999999
Q ss_pred HHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecC
Q 001580 781 LKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHR 860 (1050)
Q Consensus 781 ~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~ 860 (1050)
+++++.++|.|++|.+|++|.+||||||||++||||++++|+||||||||++||+++++.+.+.|++..+++|+|+||||
T Consensus 430 l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~ 509 (569)
T PRK10789 430 VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHR 509 (569)
T ss_pred CHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998789999999999
Q ss_pred chhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHh
Q 001580 861 LNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 901 (1050)
Q Consensus 861 ~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~ 901 (1050)
++.+..||+|++|++|++++.|++++++++. +.|..++..
T Consensus 510 ~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~y~~l~~~ 549 (569)
T PRK10789 510 LSALTEASEILVMQHGHIAQRGNHDQLAQQS-GWYRDMYRY 549 (569)
T ss_pred hhHHHcCCEEEEEeCCEEEEecCHHHHHHcC-ChHHHHHHH
Confidence 9999999999999999999999999999764 577777654
No 52
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=3e-64 Score=609.38 Aligned_cols=516 Identities=24% Similarity=0.298 Sum_probs=383.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccc-cCCC-C-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 347 ILLLCYFLTETLRVSSSTWLSYWTDQSS-LKTH-G-PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHS 423 (1050)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~-~-~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 423 (1050)
+.+++.++...+....+..+....|... .... . ...+..++.++.++..++.+++.++....+.+...++|..++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 86 (529)
T TIGR02857 7 LLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAA 86 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555566666666555432 1111 1 12233344555666778888899999999999999999999999
Q ss_pred HHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 424 ILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQS 503 (1050)
Q Consensus 424 ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~ 503 (1050)
+++.|..+|++.++|++++|+++|+..++..+...+..++..+..++..+++++...+...++++..+++.......+.+
T Consensus 87 l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~ 166 (529)
T TIGR02857 87 VAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGW 166 (529)
T ss_pred HHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999877665555555555555555555555554333332222222222233333
Q ss_pred HHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH---HHH
Q 001580 504 TAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGL---MIW 580 (1050)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~ 580 (1050)
..+...+......+.+.+.+.|+++|+++||+|+.++++.+.+.+..+...+..........+......++..+ +++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (529)
T TIGR02857 167 AAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVA 246 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444556778899999999999999999988877777665554443333222222222222222222 111
Q ss_pred HHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCC
Q 001580 581 LTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGW 660 (1050)
Q Consensus 581 ~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~ 660 (1050)
+++.+.+. .+..+. +.+..++.+...+..++..+............+.+|+.++++.+++... .. ..+ .
T Consensus 247 ~~~~~~~~-~g~~t~-----g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~---~~-~~~-~ 315 (529)
T TIGR02857 247 VYIGFRLL-AGDLDL-----ATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG---KA-PVT-A 315 (529)
T ss_pred HHHHHHHH-cCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC---Cc-CCC-C
Confidence 22222222 333221 1122233344455566666777777888899999999999875432211 10 111 1
Q ss_pred CCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHh
Q 001580 661 PSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLR 740 (1050)
Q Consensus 661 ~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r 740 (1050)
+..+.|+++||+|+|+++.+++|+|+||+|+|||++||+||||||||||+++|+|+++|++|+|.+||.|+++++..++|
T Consensus 316 ~~~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 316 APAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 12346999999999976544799999999999999999999999999999999999999999999999999999999999
Q ss_pred hheEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 741 KILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 741 ~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
++++||||+|.+|++|++|||.++. ..++++++++++.++++++++++|.|+||.+|++|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999998764 458899999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEE
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLL 873 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl 873 (1050)
+|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999987899999999999999999999985
No 53
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=4.3e-66 Score=555.21 Aligned_cols=458 Identities=27% Similarity=0.446 Sum_probs=348.8
Q ss_pred CcEEEEeEEEEeCC-CCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC-----CCCee-----------
Q 001580 40 PAISIRNGYFSWDS-KAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV-----SDASA----------- 102 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~-~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~-----~g~~~----------- 102 (1050)
+.++++|++..|.. .+.+.++++|||+|++||.+||||++|||||-..+.++|+++.. +|.+.
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 56899999999963 24568999999999999999999999999999999999998641 12221
Q ss_pred ----EEeC-cEEEEecCCCC-Cc--ccHHHHh----ccCCCCC----HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCC
Q 001580 103 ----VIRG-TVAYVPQVSWI-FN--ATVRDNI----LFGSAFE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGV 166 (1050)
Q Consensus 103 ----~~~~-~i~~v~Q~~~l-~~--~TV~eni----~~g~~~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~ 166 (1050)
.++| +|++++|+|.- .| .||...| ..-.... .++..+.++..++.+--. .+....+
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~--------rl~~yPH 156 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEK--------RLDAYPH 156 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhh--------hhhhCCc
Confidence 1233 59999999953 22 3555544 3322222 223334444555433211 2334457
Q ss_pred CCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeE
Q 001580 167 NISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMV 244 (1050)
Q Consensus 167 ~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i 244 (1050)
+|||||||||.||.||+.+|++||-||||++||......|.+.+.++.. .|.++++||||+..+.. +|||+||.+|++
T Consensus 157 eLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~i 236 (534)
T COG4172 157 ELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEI 236 (534)
T ss_pred ccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEE
Confidence 9999999999999999999999999999999999999999998877654 59999999999999987 699999999999
Q ss_pred eeccChhhhhcChH-HHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhh
Q 001580 245 KEEGTFEDLSNNGE-LFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERE 323 (1050)
Q Consensus 245 ~~~g~~~~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (1050)
++.|+.++++..+. -|.+..-+
T Consensus 237 vE~~~t~~lF~~PqHpYTr~Ll~--------------------------------------------------------- 259 (534)
T COG4172 237 VETGTTETLFAAPQHPYTRKLLA--------------------------------------------------------- 259 (534)
T ss_pred eecCcHHHHhhCCCChHHHHHHh---------------------------------------------------------
Confidence 99988776653310 00000000
Q ss_pred cccccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 001580 324 TGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSY 403 (1050)
Q Consensus 324 ~~~~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~ 403 (1050)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 404 WLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMS 483 (1050)
Q Consensus 404 ~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (1050)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 484 LWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGA 563 (1050)
Q Consensus 484 ~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (1050)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 001580 564 NRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIEL 643 (1050)
Q Consensus 564 ~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~ 643 (1050)
..
T Consensus 260 ------------------------------------------------------------------------------ae 261 (534)
T COG4172 260 ------------------------------------------------------------------------------AE 261 (534)
T ss_pred ------------------------------------------------------------------------------cC
Confidence 00
Q ss_pred CCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCC---------CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHh
Q 001580 644 PSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE---------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLF 714 (1050)
Q Consensus 644 ~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~---------~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~ 714 (1050)
|...+ ++........++.+||.+.|+-+ ...++++|||++++||.+||||.||||||||-.+|+
T Consensus 262 P~g~~-------~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~all 334 (534)
T COG4172 262 PSGDP-------PPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALL 334 (534)
T ss_pred CCCCC-------CCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHH
Confidence 11000 00001112247778887777411 125899999999999999999999999999999999
Q ss_pred ccccCCccEEEECCeecCCCChHH---HhhheEEEcCCcc--ccc-ccHHHhccc----CC-CC----CHHHHHHHHHHh
Q 001580 715 RIVELERGRILIDGFDIAKFGLMD---LRKILGIIPQSPV--LFS-GTVRFNLDP----FS-EH----SDADLWEALERA 779 (1050)
Q Consensus 715 g~~~p~~G~i~~~g~~i~~~~~~~---~r~~i~~v~Q~~~--lf~-~tv~~nl~~----~~-~~----~~~~~~~~l~~~ 779 (1050)
++++++ |+|.++|.++...+.++ +|+++-+|+|||+ |-. .||.+-|.- .. .. .++++.++++.+
T Consensus 335 rL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EV 413 (534)
T COG4172 335 RLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEV 413 (534)
T ss_pred hhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHc
Confidence 999876 99999999999888776 5889999999996 332 377764431 11 11 245567777776
Q ss_pred cHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEe
Q 001580 780 HLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLII 857 (1050)
Q Consensus 780 ~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~v 857 (1050)
|++.-. .+..+..+|||||||++||||++-+|++++||||||+||..-...|.+.|+++. .+-+-++|
T Consensus 414 GLDp~~----------r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFI 483 (534)
T COG4172 414 GLDPAT----------RNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFI 483 (534)
T ss_pred CCChhH----------hhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEE
Confidence 664322 234457899999999999999999999999999999999999999999999864 36799999
Q ss_pred ecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHHHH
Q 001580 858 AHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFSKM 898 (1050)
Q Consensus 858 tH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~ 898 (1050)
|||+..++. ||+|+||.+|+|+|+|+.+++.+++...|.+.
T Consensus 484 SHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~ 525 (534)
T COG4172 484 SHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTRA 525 (534)
T ss_pred eccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHHH
Confidence 999999988 99999999999999999999999887777643
No 54
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7.8e-63 Score=644.74 Aligned_cols=564 Identities=19% Similarity=0.271 Sum_probs=417.3
Q ss_pred ccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 327 VSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLI 406 (1050)
Q Consensus 327 ~~~~~~~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 406 (1050)
+++..+++|...... +.+++.++|.++........+..+...++.... .+....+.+.+++++++.+++.+++.++..
T Consensus 45 ~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 122 (1466)
T PTZ00265 45 IPFFLPFKCLPASHR-KLLGVSFVCATISGGTLPFFVSVFGVIMKNMNL-GENVNDIIFSLVLIGIFQFILSFISSFCMD 122 (1466)
T ss_pred ccHHHHHhcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345445555433222 223344444444444444555555555443211 112223344556667778889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 407 ISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWA 486 (1050)
Q Consensus 407 ~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (1050)
..+.+...++|.++|++++++|+.||+.++.|+++++++.|+..+...+...+..++..+..++..++++++.+|...++
T Consensus 123 ~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv 202 (1466)
T PTZ00265 123 VVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLC 202 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999998888777788888777887777777777755554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 001580 487 IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRW 566 (1050)
Q Consensus 487 ~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1050)
++.++++++++..++.+..+...+......+...+.+.|+++|+++||+|+.++++.+.+.+......+..........+
T Consensus 203 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~ 282 (1466)
T PTZ00265 203 ITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESL 282 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444444444445567888999999999999999999988888876665554443332222222
Q ss_pred H----HHHHHHHHHHHHHHHHHHHHHhc-------CccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 567 L----AIRLEIVGGLMIWLTATFAVVQN-------GSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVE 635 (1050)
Q Consensus 567 ~----~~~~~~~~~l~~~~~~~~~v~~~-------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 635 (1050)
. .+...+...+++|+++.+ +..+ +..+....++..++.++++ ..+..+......+..+..+.+
T Consensus 283 ~~~~~~~~~~~~~~l~~~~G~~l-v~~g~~~~~~~~~~t~g~v~~~~~~~l~~~-----~~l~~i~~~~~~~~~a~~a~~ 356 (1466)
T PTZ00265 283 HIGMINGFILASYAFGFWYGTRI-IISDLSNQQPNNDFHGGSVISILLGVLISM-----FMLTIILPNITEYMKSLEATN 356 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHcCCcccccccccchhHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 1 111122222333333332 3322 1222222233333332222 122233344556677889999
Q ss_pred HHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCC-CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHh
Q 001580 636 RVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPEL-PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLF 714 (1050)
Q Consensus 636 R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~-~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~ 714 (1050)
|+.++++.+++.+.. ..... .+..+.|+++||+|+|+.+. .++|+|+||+|++||++||+||||||||||+++|+
T Consensus 357 ri~~ii~~~~~~~~~-~~~~~---~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~ 432 (1466)
T PTZ00265 357 SLYEIINRKPLVENN-DDGKK---LKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIE 432 (1466)
T ss_pred HHHHHHcCCCCCCCC-CCCcc---CCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHH
Confidence 999999866543211 11111 11123699999999997432 36999999999999999999999999999999999
Q ss_pred ccccCCccEEEE-CCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCC----------------------------
Q 001580 715 RIVELERGRILI-DGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS---------------------------- 765 (1050)
Q Consensus 715 g~~~p~~G~i~~-~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---------------------------- 765 (1050)
|+|+|++|+|.+ ||.++.+++..++|++||||||+|.+|++||++||.++.
T Consensus 433 gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (1466)
T PTZ00265 433 RLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRN 512 (1466)
T ss_pred HhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccc
Confidence 999999999999 579999999999999999999999999999999997632
Q ss_pred ------------------------------CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 766 ------------------------------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 766 ------------------------------~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
..++++++++++.+++++++..+|.||+|.+|+.+.+|||||||||+|||
T Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIAR 592 (1466)
T PTZ00265 513 SCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIAR 592 (1466)
T ss_pred cccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHH
Confidence 13567899999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhhcCEEEEEeCC-----------------
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSG----------------- 876 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G----------------- 876 (1050)
||+++|+|||||||||+||+.+++.+++.|+++. +++|+|+||||+++++.||+|++|++|
T Consensus 593 All~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~ 672 (1466)
T PTZ00265 593 AIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTK 672 (1466)
T ss_pred HHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccc
Confidence 9999999999999999999999999999999875 479999999999999889999999986
Q ss_pred ------------------------------EEEEecChhHHhhcCCChHHHHHHhh
Q 001580 877 ------------------------------RVLEYDTPEELLSNEGSSFSKMVQST 902 (1050)
Q Consensus 877 ------------------------------~i~~~g~~~el~~~~~~~~~~~~~~~ 902 (1050)
+|+|+|+|+||+++..+.|..+++.+
T Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q 728 (1466)
T PTZ00265 673 DNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQ 728 (1466)
T ss_pred cccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhh
Confidence 59999999999986677899888653
No 55
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.9e-62 Score=592.95 Aligned_cols=526 Identities=18% Similarity=0.214 Sum_probs=381.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhccccccCCCC-h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 346 LILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHG-P-LFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHS 423 (1050)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~-~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 423 (1050)
+..+++.++...+....|.++....|........ . ..+..+++++.+...++.+++.++....+.+....+|.+++++
T Consensus 9 ~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ 88 (544)
T TIGR01842 9 IIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAA 88 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555566666666666543221111 1 1223334444556677788888888999999999999999999
Q ss_pred HHcCCchhhcccChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 424 ILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAV-FVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQ 502 (1050)
Q Consensus 424 ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~ 502 (1050)
+++.|+. ..+...+++.+|++.+...+.. ....++..++.++.. ++++.+.+...++++..+++++.+..+..
T Consensus 89 ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~l~li~l~~~~l~~~i~~~~~ 162 (544)
T TIGR01842 89 SFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYL-LVCFLLHPWIGILALGGAVVLVGLALLNN 162 (544)
T ss_pred HhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9999984 2356788999999999876554 233333333333322 23333333332222221122222222333
Q ss_pred HHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH---HHHHHHHH
Q 001580 503 STAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRL---EIVGGLMI 579 (1050)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~ 579 (1050)
+..++..+......+...+.+.|.++|+++||+|+.++++.+.+.+..+...+................ ..+..+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (544)
T TIGR01842 163 RATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLV 242 (544)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334445566778899999999999999999988877776665554433332222111111111 11222222
Q ss_pred HHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCC
Q 001580 580 WLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPG 659 (1050)
Q Consensus 580 ~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~ 659 (1050)
+.++.+.+. .+..+.. .+..++.+...+..++..+............+.+|+.++++.+++... ....
T Consensus 243 ~~~g~~l~~-~g~it~g-----~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~----~~~~-- 310 (544)
T TIGR01842 243 LGLGAYLAI-DGEITPG-----MMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP----AMPL-- 310 (544)
T ss_pred HHHHHHHHH-cCCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC----CCCC--
Confidence 222333232 3333321 122223344455667777777777888999999999999976554321 1111
Q ss_pred CCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH
Q 001580 660 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL 739 (1050)
Q Consensus 660 ~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~ 739 (1050)
.+..+.++++||+|+|+++.+++|+|+||+++|||++||+||||||||||+++|+|+++|++|+|.+||.++.+++...+
T Consensus 311 ~~~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~ 390 (544)
T TIGR01842 311 PEPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETF 390 (544)
T ss_pred CCCCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHH
Confidence 11234699999999997544579999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheEEEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHc
Q 001580 740 RKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 818 (1050)
Q Consensus 740 r~~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall 818 (1050)
|+.++||||+|.+|++|+++|+.++.+ .++++++++++.++++++++++|.|++|.+|++|.+||||||||++||||++
T Consensus 391 ~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall 470 (544)
T TIGR01842 391 GKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALY 470 (544)
T ss_pred hhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999986554 6889999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhh
Q 001580 819 RRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 819 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
++|++|||||||++||+++++.+.+.|++.. +++|+|+|||+++.+..||+|++|++|++++.|+|+++++
T Consensus 471 ~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 471 GDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred cCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999999999999875 5799999999999988899999999999999999999875
No 56
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=2.9e-63 Score=648.66 Aligned_cols=211 Identities=26% Similarity=0.393 Sum_probs=176.4
Q ss_pred cEEEEEEEEEeC--CCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc---CCccEEEECCeecCCCChHHH
Q 001580 665 SIKFEDVVLRYR--PELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDL 739 (1050)
Q Consensus 665 ~i~~~~v~~~y~--~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~---p~~G~i~~~g~~i~~~~~~~~ 739 (1050)
.++++||+++|+ ++.+++|+|||++++|||++||+||||||||||+++|+|..+ |++|+|.+||+++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 378999999995 223479999999999999999999999999999999999997 78899999999984 257
Q ss_pred hhheEEEcCCcccc-cccHHHhcccCC------CCCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHH
Q 001580 740 RKILGIIPQSPVLF-SGTVRFNLDPFS------EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 808 (1050)
Q Consensus 740 r~~i~~v~Q~~~lf-~~tv~~nl~~~~------~~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~ 808 (1050)
|+.+|||||++.++ ..||+|||.+.. ..+++ .+.++++..++.+ -.++.+++.+.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHh
Confidence 88999999998655 569999997521 12222 2344444444432 346777777778999999
Q ss_pred HHHHHHHHHccCCC-EEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhh--hhcCEEEEEeCC-EEEEecC
Q 001580 809 QLLSLSRALLRRSK-ILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTI--IDCDRILLLDSG-RVLEYDT 883 (1050)
Q Consensus 809 qrl~lArall~~p~-illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~--~~~d~i~vl~~G-~i~~~g~ 883 (1050)
||++|||+|+.+|+ ||+|||||+|||+.+...+++.|+++. +|+|||+++|+++.. ..||++++|++| ++++.|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 999999999999999999999999874 579999999999973 459999999987 9999999
Q ss_pred hhH
Q 001580 884 PEE 886 (1050)
Q Consensus 884 ~~e 886 (1050)
+.+
T Consensus 988 ~~~ 990 (1394)
T TIGR00956 988 LGE 990 (1394)
T ss_pred ccc
Confidence 754
No 57
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2.2e-63 Score=609.08 Aligned_cols=200 Identities=19% Similarity=0.287 Sum_probs=161.8
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhhe
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 743 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i 743 (1050)
..++++||+++|+++ +++|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 359999999999643 2599999999999999999999999999999999999999999999875 2469
Q ss_pred EEEcCCcccccccHHHhcc--c---CCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHc
Q 001580 744 GIIPQSPVLFSGTVRFNLD--P---FSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 818 (1050)
Q Consensus 744 ~~v~Q~~~lf~~tv~~nl~--~---~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall 818 (1050)
||+||++. ...++.+|.. + +....++++.++++..++.+ ......+..|||||||||+||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~----------~~~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTG----------NLALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCCh----------HHhcCCccccCHHHHHHHHHHHHHh
Confidence 99999863 2223433321 1 11223445555555544431 1234455789999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEE-EecChhHHh
Q 001580 819 RRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVL-EYDTPEELL 888 (1050)
Q Consensus 819 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~-~~g~~~el~ 888 (1050)
.+|++|||||||++||+.+...+.+.|.+. ++|||+|||+++++.. ||++++|++|+++ ..|+++++.
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999999874 4599999999999987 9999999999998 568888764
No 58
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.1e-59 Score=570.46 Aligned_cols=481 Identities=17% Similarity=0.157 Sum_probs=347.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 001580 387 YSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQV 466 (1050)
Q Consensus 387 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~ 466 (1050)
+.++.++.+++.+...++....+.+...++|..+++++++.|+.+|+++++|++++|+++|++.++..+.. ...++..+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~ 137 (555)
T TIGR01194 59 FGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIAL 137 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHH
Confidence 33445566778888888889999999999999999999999999999999999999999999999987654 33444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHH--HHHH
Q 001580 467 SQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYD--RMAD 544 (1050)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~--~~~~ 544 (1050)
..++.++++++++.+...++++.++++.+.......+..+..........+.+.+.+.|.+.|++++|+|+.++ ...+
T Consensus 138 ~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~ 217 (555)
T TIGR01194 138 AIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHG 217 (555)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHH
Confidence 44444555555555544444333333322323323222233333334445678889999999999999999843 3333
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 545 INGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLA 624 (1050)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~ 624 (1050)
.+.+..+...+..................+..+...+...+... .+..+ ...+..++.+...+..++..+....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t-----~g~l~a~~~~~~~l~~pi~~l~~~~ 291 (555)
T TIGR01194 218 AIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGCALFAAAM-FASID-----AAAISAFVLALLYIKGPLEMLVSAL 291 (555)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCC-----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34433333333222111111111111111111111000000000 11111 1122233344455667777788888
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCcccc---CCCCC--CCCCCCCccEEEEEEEEEeCCC---CCCceeeeeEEecCCcEE
Q 001580 625 SLAENSLNAVERVGNYIELPSEAPLVI---ESNRP--PPGWPSSGSIKFEDVVLRYRPE---LPPVLHGLSFTIPPSDKV 696 (1050)
Q Consensus 625 ~~~~~~~~a~~R~~~~~~~~~e~~~~~---~~~~~--~~~~~~~~~i~~~~v~~~y~~~---~~~~l~~vs~~i~~Ge~~ 696 (1050)
...+....+.+|+.++++.+++++... +.... .+.....+.|+++||+|+|++. .+++|+|+||++++||++
T Consensus 292 ~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~ 371 (555)
T TIGR01194 292 PILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIV 371 (555)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEE
Confidence 888999999999999976432211110 00000 0111123569999999999743 236999999999999999
Q ss_pred EEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHH
Q 001580 697 GIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEAL 776 (1050)
Q Consensus 697 ~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l 776 (1050)
||+||||||||||+++|+|+++|++|+|.+||.++.+++..++|++++||+|++.+|++|+++|+. ...+++++++++
T Consensus 372 aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~--~~~~~~~~~~~~ 449 (555)
T TIGR01194 372 FIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDEG--EHASLDNAQQYL 449 (555)
T ss_pred EEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhcccc--cchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999963 345678899999
Q ss_pred HHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHH-H-cCCcEE
Q 001580 777 ERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIRE-E-FKSCTM 854 (1050)
Q Consensus 777 ~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~-~-~~~~tv 854 (1050)
+.++++++++.+|.|++|. .+|||||||||+||||++++|+||||||||++||+++++.+++.+.+ . .+++|+
T Consensus 450 ~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~ti 524 (555)
T TIGR01194 450 QRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTI 524 (555)
T ss_pred HHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEE
Confidence 9999999999999999994 67999999999999999999999999999999999999999887643 3 368999
Q ss_pred EEeecCchhhhhcCEEEEEeCCEEEEe
Q 001580 855 LIIAHRLNTIIDCDRILLLDSGRVLEY 881 (1050)
Q Consensus 855 i~vtH~~~~~~~~d~i~vl~~G~i~~~ 881 (1050)
|+||||++.+..||+|++|++|++++.
T Consensus 525 iiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 525 IIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred EEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 999999999988999999999999874
No 59
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.4e-62 Score=556.00 Aligned_cols=449 Identities=24% Similarity=0.354 Sum_probs=340.2
Q ss_pred CCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------------e
Q 001580 39 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------R 105 (1050)
Q Consensus 39 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------~ 105 (1050)
.+.++++|++++|+. .++|++|||++++||++||+|.||||||||+|+|+|.++|++|.+..- .
T Consensus 6 ~~ll~~~~i~K~Fgg---V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~ 82 (500)
T COG1129 6 PPLLELRGISKSFGG---VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALA 82 (500)
T ss_pred cceeeeecceEEcCC---ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHh
Confidence 356899999999973 479999999999999999999999999999999999999999866431 1
Q ss_pred CcEEEEecCCCCC-cccHHHHhccCCCCC-------HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHH
Q 001580 106 GTVAYVPQVSWIF-NATVRDNILFGSAFE-------PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 177 (1050)
Q Consensus 106 ~~i~~v~Q~~~l~-~~TV~eni~~g~~~~-------~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~ 177 (1050)
..|+.|+|+..|+ +.||.|||.+|.... ..++.+..+ .+...+... . .......+||+||||-|+
T Consensus 83 ~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~--~~l~~lg~~----~-~~~~~v~~LsiaqrQ~Ve 155 (500)
T COG1129 83 AGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRAR--ELLARLGLD----I-DPDTLVGDLSIAQRQMVE 155 (500)
T ss_pred CCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHH--HHHHHcCCC----C-ChhhhhhhCCHHHHHHHH
Confidence 2499999999986 899999999986432 122221111 111111110 0 023445789999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccCh-hhhhc
Q 001580 178 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTF-EDLSN 255 (1050)
Q Consensus 178 LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~-~~l~~ 255 (1050)
|||||..+++|+|||||||+|++...+.+|+.+.++..+|.++|+|||+++++.. ||||.||+||+.+.+++. +++..
T Consensus 156 IArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~ 235 (500)
T COG1129 156 IARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSE 235 (500)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCH
Confidence 9999999999999999999999999999999998888899999999999999875 799999999998864431 11100
Q ss_pred ChHHHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhcccccHHHHHHH
Q 001580 256 NGELFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRY 335 (1050)
Q Consensus 256 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 335 (1050)
.
T Consensus 236 ~------------------------------------------------------------------------------- 236 (500)
T COG1129 236 D------------------------------------------------------------------------------- 236 (500)
T ss_pred H-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 336 KDALGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKR 415 (1050)
Q Consensus 336 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (1050)
T Consensus 237 -------------------------------------------------------------------------------- 236 (500)
T COG1129 237 -------------------------------------------------------------------------------- 236 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 416 LHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFY 495 (1050)
Q Consensus 416 l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~ 495 (1050)
.+ +..+.
T Consensus 237 ----------------------------------~l-------v~~Mv-------------------------------- 243 (500)
T COG1129 237 ----------------------------------EL-------VRLMV-------------------------------- 243 (500)
T ss_pred ----------------------------------HH-------HHHhh--------------------------------
Confidence 00 00000
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 001580 496 AAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVG 575 (1050)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (1050)
T Consensus 244 -------------------------------------------------------------------------------- 243 (500)
T COG1129 244 -------------------------------------------------------------------------------- 243 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCC
Q 001580 576 GLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNR 655 (1050)
Q Consensus 576 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~ 655 (1050)
+.. +.+. .|. + . ..
T Consensus 244 --------------Gr~--------------------------------------------~~~~--~~~--~-~--~~- 257 (500)
T COG1129 244 --------------GRE--------------------------------------------LEDL--FPE--P-P--EE- 257 (500)
T ss_pred --------------Ccc--------------------------------------------hhhh--ccc--c-c--cc-
Confidence 000 0000 000 0 0 00
Q ss_pred CCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCC
Q 001580 656 PPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG 735 (1050)
Q Consensus 656 ~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~ 735 (1050)
.+....++++|++.. ..++|+||++++||++||.|--|||+|-++++|.|..++.+|+|.++|+++.-.+
T Consensus 258 ----~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~s 327 (500)
T COG1129 258 ----GIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRS 327 (500)
T ss_pred ----CCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCC
Confidence 001123677777653 2589999999999999999999999999999999999999999999999998877
Q ss_pred hH-HHhhheEEEcCCcc---cc-cccHHHhcccC--CCCCHH-HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhH
Q 001580 736 LM-DLRKILGIIPQSPV---LF-SGTVRFNLDPF--SEHSDA-DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 807 (1050)
Q Consensus 736 ~~-~~r~~i~~v~Q~~~---lf-~~tv~~nl~~~--~~~~~~-~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq 807 (1050)
+. ..+..|+|||.|.- +| ..+|++|+... ...... -+....++..+.+++.++...-.. ......+||||+
T Consensus 328 p~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s-~~~~v~~LSGGN 406 (500)
T COG1129 328 PRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPS-PEQPIGTLSGGN 406 (500)
T ss_pred HHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCC-ccchhhcCCchh
Confidence 76 56778999999873 55 45999999643 111101 233444455566677765333211 224456799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChh
Q 001580 808 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPE 885 (1050)
Q Consensus 808 ~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~ 885 (1050)
+||+.|||+|..+|+||||||||.|+|..+++.|++.|+++. +|.+||+||.+++++.. ||||+||.+|+++..=+.+
T Consensus 407 QQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~ 486 (500)
T COG1129 407 QQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDRE 486 (500)
T ss_pred hhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEeccc
Confidence 999999999999999999999999999999999999999976 58999999999999875 9999999999999864443
Q ss_pred H
Q 001580 886 E 886 (1050)
Q Consensus 886 e 886 (1050)
+
T Consensus 487 ~ 487 (500)
T COG1129 487 E 487 (500)
T ss_pred c
Confidence 3
No 60
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.6e-62 Score=527.92 Aligned_cols=486 Identities=25% Similarity=0.382 Sum_probs=367.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 001580 403 YWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIV-ST 481 (1050)
Q Consensus 403 ~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 481 (1050)
.++...+..+...+--..|.|+.++++.|..+..+|.+..-+.....-++......+...+..++.+..+.++++.. .+
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~ 83 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGW 83 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 34556667777788888999999999999988877765555444444444444444444444444444333333332 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Q 001580 482 MSLWAIMPLLLLFYAAYLYYQ-STAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVN 560 (1050)
Q Consensus 482 ~~~~~~~~lll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (1050)
+...+.+..+ ++|..+.+.. .-.-..++....+.+..++.-.+.+-+..++|.|+.|+.....+....+...+.....
T Consensus 84 ~f~~~t~vtv-~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~ 162 (497)
T COG5265 84 WFALTTLVTV-ILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKV 162 (497)
T ss_pred HHHHHHHHHH-HHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHH
Confidence 2222222222 2233332211 1122344555556677778888999999999999999999988888888777766655
Q ss_pred HHHhHHHHHHHHHHHHHHHHH---HHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 561 MGANRWLAIRLEIVGGLMIWL---TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERV 637 (1050)
Q Consensus 561 ~~~~~~~~~~~~~~~~l~~~~---~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~ 637 (1050)
...-.|+.+.-..+....... .+...+ ..+..+. ..+...-.+..++..|+..+-.....+.+.....++.
T Consensus 163 ~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v-~~g~~Tv-----gD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~m 236 (497)
T COG5265 163 HVSLLVLNFGQTAIFSTGLRVMMTMSALGV-EEGQLTV-----GDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKM 236 (497)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhcHHHH-hhccCCc-----hhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHH
Confidence 544445544333222111111 111111 1122211 1122233455556666666666666777778888888
Q ss_pred HhhhcCCCCCccccCCCCCCCCC-CCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcc
Q 001580 638 GNYIELPSEAPLVIESNRPPPGW-PSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRI 716 (1050)
Q Consensus 638 ~~~~~~~~e~~~~~~~~~~~~~~-~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~ 716 (1050)
.++.+.+.+.. +....++.| -..+.+.|++|+|.|.+. +++|+++||++++|+++||||++|+||||++++|.++
T Consensus 237 fdLl~~~~~v~---d~pda~~L~~~~~g~v~F~~V~F~y~~~-r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRF 312 (497)
T COG5265 237 FDLLDVEAEVS---DAPDAPPLWPVRLGAVAFINVSFAYDPR-RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRF 312 (497)
T ss_pred HHhhccchhhc---cCCCCccccccccceEEEEEEEeecccc-chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHH
Confidence 88877655432 222223334 335679999999999866 4899999999999999999999999999999999999
Q ss_pred ccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchh
Q 001580 717 VELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQ 795 (1050)
Q Consensus 717 ~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~ 795 (1050)
|++++|.|.+||+|++......+|+.||+||||..||++|+..|+.++++ .+++++..+++.+.++++++.+|+||+|.
T Consensus 313 yD~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~ 392 (497)
T COG5265 313 YDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTG 392 (497)
T ss_pred hCCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcc
Confidence 99999999999999999999999999999999999999999999998765 68999999999999999999999999999
Q ss_pred hhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeC
Q 001580 796 VSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDS 875 (1050)
Q Consensus 796 v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~ 875 (1050)
|||+|-.|||||||||+|||+++++|+||+|||+||+||..|++.|+..|++...++|.++|+||++++.+||.|+||++
T Consensus 393 VgerglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~ 472 (497)
T COG5265 393 VGERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDN 472 (497)
T ss_pred cchheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecChhHHhhcCCChHHHHHH
Q 001580 876 GRVLEYDTPEELLSNEGSSFSKMVQ 900 (1050)
Q Consensus 876 G~i~~~g~~~el~~~~~~~~~~~~~ 900 (1050)
|+|+|.|+|+||+++ +|.|..||.
T Consensus 473 g~i~erg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 473 GRIVERGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred CEEEecCcHHHHHHc-CChHHHHhc
Confidence 999999999999997 778998874
No 61
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.4e-62 Score=587.32 Aligned_cols=191 Identities=21% Similarity=0.281 Sum_probs=160.3
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|++ ..|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++ ..++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 4899999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEcCCcccc-cccHHHhcccCCC-CC-HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 745 IIPQSPVLF-SGTVRFNLDPFSE-HS-DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 745 ~v~Q~~~lf-~~tv~~nl~~~~~-~~-~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
|+||++.++ +.|+++|+.+... .. .....++++.. |+.........+|||||||||+|||||+.+|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l-----------~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p 472 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPL-----------QLERLLDKNVKDLSGGELQRVAIAACLSRDA 472 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHC-----------CCHHHHhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 999998755 5599999865311 11 12233333333 4444455666789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecC
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 883 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~ 883 (1050)
+||||||||++||+.++..+.+.|+++.+ ++|+|+||||++++.. |||+++|++ ++...|+
T Consensus 473 ~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 473 DLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 99999999999999999999999998743 7899999999999877 999999965 8877776
No 62
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.9e-59 Score=609.66 Aligned_cols=211 Identities=25% Similarity=0.325 Sum_probs=171.6
Q ss_pred cEEEEEEEEEeCC-----------CCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC--CccEEEECCeec
Q 001580 665 SIKFEDVVLRYRP-----------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL--ERGRILIDGFDI 731 (1050)
Q Consensus 665 ~i~~~~v~~~y~~-----------~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p--~~G~i~~~g~~i 731 (1050)
.+.++||++..+. +...+|+|||++++||+++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 5899999998741 123699999999999999999999999999999999999774 689999999876
Q ss_pred CCCChHHHhhheEEEcCCcccccc-cHHHhcccCC------CCCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcC-
Q 001580 732 AKFGLMDLRKILGIIPQSPVLFSG-TVRFNLDPFS------EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEA- 799 (1050)
Q Consensus 732 ~~~~~~~~r~~i~~v~Q~~~lf~~-tv~~nl~~~~------~~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~- 799 (1050)
. ...+|+.+|||+|++.++.. ||+|||.+.. ..+.+ .+.+.++..++.+. .++.+|..
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 4 24567789999999987765 9999996421 11222 24445555554432 23444432
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchh-h-hhcCEEEEEeC-
Q 001580 800 GENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT-I-IDCDRILLLDS- 875 (1050)
Q Consensus 800 ~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~-~-~~~d~i~vl~~- 875 (1050)
...|||||||||+|||+|+.+|+||+|||||+|||+.+...+.+.|+++. .|+|||+++|+++. + +.||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 25799999999999999999999999999999999999999999999865 47999999999984 4 45999999996
Q ss_pred CEEEEecChh
Q 001580 876 GRVLEYDTPE 885 (1050)
Q Consensus 876 G~i~~~g~~~ 885 (1050)
|+++..|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999864
No 63
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.1e-58 Score=608.58 Aligned_cols=470 Identities=20% Similarity=0.277 Sum_probs=347.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 406 IISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLW 485 (1050)
Q Consensus 406 ~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1050)
...+.+....++..+|+|++++|..++.+.++|+++|++++|++.++.........+..+ +.++..++++.....+..+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~~l~~l~~~p-l~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQQLHTLWSAP-FRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 456667777888899999999999999999999999999999999998775433333333 3333222222221112112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 001580 486 AIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANR 565 (1050)
Q Consensus 486 ~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1050)
+.++++++++++..++.+..+...+..........+.+.|.++|+++||+|++++.+.+.+.+..+...+..........
T Consensus 445 ~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~ 524 (1622)
T PLN03130 445 IGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSA 524 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222223333333333333333344444556677889999999999999999999888877766554443333222222
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 001580 566 WLAIRLEIVGGLM-IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELP 644 (1050)
Q Consensus 566 ~~~~~~~~~~~l~-~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~ 644 (1050)
+..+.......++ +..++.+.+ .++.++....| .++++...+..++..+......+..+..+.+|+.++++.+
T Consensus 525 ~~~~~~~~~~~~v~~~~fg~~~~-~~g~Lt~g~vf-----~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~ 598 (1622)
T PLN03130 525 FNSFILNSIPVLVTVVSFGVFTL-LGGDLTPARAF-----TSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAE 598 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCCCCHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 2222222221111 112222222 24444433222 2333444556667777777888888999999999998765
Q ss_pred CCCccccCCCCCCCCCCCCccEEEEEEEEEeCCC-CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCc-c
Q 001580 645 SEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER-G 722 (1050)
Q Consensus 645 ~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~-G 722 (1050)
+..+. ...+ ..+..+.|+++|++|+|++. .+++|+|+||+|++|++++|+||+|||||||+++|+|+++|++ |
T Consensus 599 e~~~~---~~~~--~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG 673 (1622)
T PLN03130 599 ERVLL---PNPP--LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDA 673 (1622)
T ss_pred ccccc---cCCc--ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCc
Confidence 43211 0000 01122469999999999642 2479999999999999999999999999999999999999999 9
Q ss_pred EEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCC
Q 001580 723 RILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 802 (1050)
Q Consensus 723 ~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~ 802 (1050)
+|.+ |.+|+||||+|++|++||||||.++.+.++++++++++.|++.++++.+|.|++|.+|++|.+
T Consensus 674 ~I~l-------------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~ 740 (1622)
T PLN03130 674 SVVI-------------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVN 740 (1622)
T ss_pred eEEE-------------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCC
Confidence 9975 458999999999999999999999888889999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHH-HHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEe
Q 001580 803 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALI-QKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 881 (1050)
Q Consensus 803 LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i-~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~ 881 (1050)
|||||||||+||||++++|+|||||||||+||+++++.+ .++++...+++|+|+|||+++.+..||+|++|++|+|++.
T Consensus 741 LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~ 820 (1622)
T PLN03130 741 ISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEE 820 (1622)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEe
Confidence 999999999999999999999999999999999998876 5677777789999999999999999999999999999999
Q ss_pred cChhHHhhcCCChHHHHHHh
Q 001580 882 DTPEELLSNEGSSFSKMVQS 901 (1050)
Q Consensus 882 g~~~el~~~~~~~~~~~~~~ 901 (1050)
|+++|++++ ++.|..+...
T Consensus 821 Gt~~eL~~~-~~~~~~l~~~ 839 (1622)
T PLN03130 821 GTYEELSNN-GPLFQKLMEN 839 (1622)
T ss_pred CCHHHHHhc-chhHHHHHHh
Confidence 999999875 3466666543
No 64
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.1e-58 Score=609.06 Aligned_cols=471 Identities=19% Similarity=0.240 Sum_probs=346.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 406 IISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLW 485 (1050)
Q Consensus 406 ~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1050)
...+.+....++..+|+++++.|..++.+.+.|+++|++++|++.++..... +..++...+.++..++++.....+..+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~~~-l~~l~~~p~~ii~~~~~l~~~lg~~~l 444 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIAEQ-LHGLWSAPFRIIVSMVLLYQQLGVASL 444 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 4666777778888999999999999999999999999999999999987643 333333322332222222221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 001580 486 AIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANR 565 (1050)
Q Consensus 486 ~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1050)
+.++++++++++..++.+......+..........+.+.|.++|+++||+|++++.+.+.+.+..+...+..........
T Consensus 445 ~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~ 524 (1495)
T PLN03232 445 FGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSA 524 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222222222222333333444444444555677889999999999999999998888777666554444333322222
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 001580 566 WLAIRLEIVGGLMI-WLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELP 644 (1050)
Q Consensus 566 ~~~~~~~~~~~l~~-~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~ 644 (1050)
+..+.......++. +..+.+.+. ++.++... +..+++++..+..++..+.........+..+.+|+.++++.+
T Consensus 525 ~~~~~~~~~~~~~~~~~fg~~~v~-~~~lt~g~-----vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~ 598 (1495)
T PLN03232 525 FNSFILNSIPVVVTLVSFGVFVLL-GGDLTPAR-----AFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSE 598 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCCCHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 22222222111111 122222222 33333322 222334455566677777788888889999999999999765
Q ss_pred CCCccccCCCCCCCCCCCCccEEEEEEEEEeCCC-CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccE
Q 001580 645 SEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGR 723 (1050)
Q Consensus 645 ~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~ 723 (1050)
++... ... +..+..+.|+++|++|+|++. .+++|+|+||+|++||+++|+||+|||||||+++|+|+++|++|.
T Consensus 599 ~~~~~---~~~--~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~ 673 (1495)
T PLN03232 599 ERILA---QNP--PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETS 673 (1495)
T ss_pred ccccc---ccC--CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCC
Confidence 43211 000 011123469999999999742 347999999999999999999999999999999999999999987
Q ss_pred EEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCC
Q 001580 724 ILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 803 (1050)
Q Consensus 724 i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~L 803 (1050)
+. .+|++|+||||+|++|++||||||.++.+.++++++++++.|++.++++.+|.|++|.+||+|.+|
T Consensus 674 i~------------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~L 741 (1495)
T PLN03232 674 SV------------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNI 741 (1495)
T ss_pred EE------------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCccc
Confidence 63 256789999999999999999999998888899999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHH-HHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEec
Q 001580 804 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQ-KTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYD 882 (1050)
Q Consensus 804 SgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~-~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g 882 (1050)
||||||||+||||++++|+|||||||||+||+++++.+. ++++...+++|+|+|||+++.+..||+|++|++|++++.|
T Consensus 742 SGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~G 821 (1495)
T PLN03232 742 SGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEG 821 (1495)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEec
Confidence 999999999999999999999999999999999988775 5566666889999999999999999999999999999999
Q ss_pred ChhHHhhcCCChHHHHHHh
Q 001580 883 TPEELLSNEGSSFSKMVQS 901 (1050)
Q Consensus 883 ~~~el~~~~~~~~~~~~~~ 901 (1050)
+|+|++++ ++.|..++..
T Consensus 822 t~~eL~~~-~~~~~~l~~~ 839 (1495)
T PLN03232 822 TFAELSKS-GSLFKKLMEN 839 (1495)
T ss_pred CHHHHHhc-chhHHHHHHh
Confidence 99999875 3467666644
No 65
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.5e-59 Score=522.56 Aligned_cols=453 Identities=24% Similarity=0.385 Sum_probs=341.8
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------------eC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RG 106 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------~~ 106 (1050)
+.++++|+++.|+ .-.+++||||+|++||++||+|+||+|||||+++|.|.++|++|.+.+- +.
T Consensus 3 ~~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~ 79 (501)
T COG3845 3 PALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRL 79 (501)
T ss_pred ceEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHc
Confidence 4689999999998 3579999999999999999999999999999999999999999876541 22
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCCC------CHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSAF------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 179 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~~------~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LA 179 (1050)
.||+|+|++.|+ +.||.|||.+|.+. +.....+.++.......+...| .+....||=|+||||.|-
T Consensus 80 GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp-------~~~V~dLsVG~qQRVEIl 152 (501)
T COG3845 80 GIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDP-------DAKVADLSVGEQQRVEIL 152 (501)
T ss_pred CCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCc-------cceeecCCcchhHHHHHH
Confidence 499999999997 78999999998642 2222222222222222233333 234468999999999999
Q ss_pred HHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcChH
Q 001580 180 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNGE 258 (1050)
Q Consensus 180 raL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 258 (1050)
+|||++|++|||||||+.|-|...+.+|+.+.++...|+|+|+|||.+.++.. |||+.||++|+++...+ .....
T Consensus 153 KaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~--~~~~~-- 228 (501)
T COG3845 153 KALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVD--PVAET-- 228 (501)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeec--CCCCC--
Confidence 99999999999999999999999999999998888899999999999999876 79999999999763211 00000
Q ss_pred HHHHHHHHhhhhhhhhhhcccCcccccCCCCCCCCCCCCCCCCccccccccccccchhhhhhhhhcccccHHHHHHHHHH
Q 001580 259 LFQKLMENAGKMEEYVEEKEDGETVDNKTSKPAANGVDNDLPKEASDTRKTKEGKSVLIKQEERETGVVSFKVLSRYKDA 338 (1050)
Q Consensus 259 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 338 (1050)
. .++
T Consensus 229 -----------------------------------------t-----------------~~e------------------ 232 (501)
T COG3845 229 -----------------------------------------T-----------------EEE------------------ 232 (501)
T ss_pred -----------------------------------------C-----------------HHH------------------
Confidence 0 000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 339 LGGLWVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHD 418 (1050)
Q Consensus 339 ~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (1050)
T Consensus 233 -------------------------------------------------------------------------------- 232 (501)
T COG3845 233 -------------------------------------------------------------------------------- 232 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 419 AMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAY 498 (1050)
Q Consensus 419 ~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~ 498 (1050)
+ ...+
T Consensus 233 --------------------------------l-------a~lM------------------------------------ 237 (501)
T COG3845 233 --------------------------------L-------AELM------------------------------------ 237 (501)
T ss_pred --------------------------------H-------HHHh------------------------------------
Confidence 0 0000
Q ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 001580 499 LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLM 578 (1050)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 578 (1050)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCC
Q 001580 579 IWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 658 (1050)
Q Consensus 579 ~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~ 658 (1050)
.+.. +..+.. ..+
T Consensus 238 ----------vG~~------------------------------------------------v~~~~~---------~~~ 250 (501)
T COG3845 238 ----------VGRE------------------------------------------------VVLRVV---------KPP 250 (501)
T ss_pred ----------cCCc------------------------------------------------cccccc---------cCC
Confidence 0000 000000 011
Q ss_pred CCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeec-CCCChH
Q 001580 659 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDI-AKFGLM 737 (1050)
Q Consensus 659 ~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i-~~~~~~ 737 (1050)
..|....++++|++..-+.+ .+.+++|||+|++||++||.|-.|-|-+.|+.+|+|+.+|.+|+|.++|+|+ ...++.
T Consensus 251 ~~pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~ 329 (501)
T COG3845 251 STPGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPR 329 (501)
T ss_pred CCCCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHH
Confidence 11223458999999976433 3689999999999999999999999999999999999999999999999997 677888
Q ss_pred HHhhh-eEEEcCCcc----cccccHHHhcccCCCC-----CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhH
Q 001580 738 DLRKI-LGIIPQSPV----LFSGTVRFNLDPFSEH-----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 807 (1050)
Q Consensus 738 ~~r~~-i~~v~Q~~~----lf~~tv~~nl~~~~~~-----~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq 807 (1050)
.+|+. ++|||.|.. ....|+.+|+.+.... ....+..-.-.....+.++++... ..-......+||||+
T Consensus 330 ~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr-~~~~~~~a~~LSGGN 408 (501)
T COG3845 330 ERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVR-APSPDAPARSLSGGN 408 (501)
T ss_pred HHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCcc-CCCCCcchhhcCCcc
Confidence 77665 999999983 4466999998543211 000011001111233445543221 011223346799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChh
Q 001580 808 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPE 885 (1050)
Q Consensus 808 ~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~ 885 (1050)
+||+-+||-|.++|++||..+||.|||..+.+.|++.|.+.+ .|+.|++||-+++++.. ||||.||.+|+++....++
T Consensus 409 qQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~~~ 488 (501)
T COG3845 409 QQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVPPE 488 (501)
T ss_pred eehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceecccccc
Confidence 999999999999999999999999999999999999998865 57899999999999877 9999999999999887776
Q ss_pred H
Q 001580 886 E 886 (1050)
Q Consensus 886 e 886 (1050)
+
T Consensus 489 ~ 489 (501)
T COG3845 489 E 489 (501)
T ss_pred c
Confidence 5
No 66
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.6e-57 Score=564.07 Aligned_cols=527 Identities=20% Similarity=0.267 Sum_probs=395.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccccccC---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 349 LLCYFLTETLRVSSSTWLSYWTDQSSLK---THGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSIL 425 (1050)
Q Consensus 349 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll 425 (1050)
.++.++........|..+...++..... ......|...+.+..+...++.....+.....+.+....+-..+|+|.+
T Consensus 207 ~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L 286 (1381)
T KOG0054|consen 207 GIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIYRKAL 286 (1381)
T ss_pred HHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhh
Confidence 3333344444555666655444332222 1123344444444455566666666677778888999999999999999
Q ss_pred cCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 426 RAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTA 505 (1050)
Q Consensus 426 ~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~ 505 (1050)
+++...-...+.|+++|.++.|++++++........+..++..++...++...+++..+..++.+++++ ++..+..+..
T Consensus 287 ~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~-p~n~~~a~~~ 365 (1381)
T KOG0054|consen 287 RLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLI-PLNSFLAKKI 365 (1381)
T ss_pred cCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 999999989999999999999999999998888888888877777777776666666666555444433 3333333333
Q ss_pred HHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 001580 506 REVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATF 585 (1050)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 585 (1050)
...+.............++|.++|+++||.|.+|+.|.+...+..+...+.-........+..+.......++.++....
T Consensus 366 ~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~tF~~ 445 (1381)
T KOG0054|consen 366 AKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVVTFVV 445 (1381)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334445567899999999999999999888777666554444333333222333332222222222222222
Q ss_pred HH-HhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCc
Q 001580 586 AV-VQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSG 664 (1050)
Q Consensus 586 ~v-~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 664 (1050)
.+ ..++..++..+|. .+++...+..++..++.......++.++++|+.+++..++..+...+. .+..+.+.
T Consensus 446 ~v~~~~~~lt~~~aF~-----slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~---~~~~~~~~ 517 (1381)
T KOG0054|consen 446 FVLLLGNLLTASTAFT-----SLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVER---SPDEAGEN 517 (1381)
T ss_pred HhhccCccccHhHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcccccc---CCCCCCCc
Confidence 22 2334444444443 345555566677777777788888899999999999776554332221 11122344
Q ss_pred cEEEEEEEEEeCC-CCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhhe
Q 001580 665 SIKFEDVVLRYRP-ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~-~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i 743 (1050)
.++++|.+|++++ +..+.|+||||+|++|+.+||||+.|||||+|+.+|+|+++..+|+|.++| .+
T Consensus 518 ~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g-------------si 584 (1381)
T KOG0054|consen 518 AIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG-------------SV 584 (1381)
T ss_pred eEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC-------------eE
Confidence 6999999999975 334599999999999999999999999999999999999999999999998 39
Q ss_pred EEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 001580 744 GIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 823 (1050)
Q Consensus 744 ~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~i 823 (1050)
+||||.|++|++||||||.|+.++.++++.+++++|.+...++.+|.|..|.+||+|.+|||||||||+||||++++++|
T Consensus 585 aYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adI 664 (1381)
T KOG0054|consen 585 AYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADI 664 (1381)
T ss_pred EEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCcCCCHHH-HHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHH
Q 001580 824 LVLDEATAAVDVRT-DALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKM 898 (1050)
Q Consensus 824 llLDEpts~LD~~~-~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~ 898 (1050)
+|||.|.|++|+.+ ++.+.++|+...+++|+|+|||.++++.+||.|++|++|+|.+.|+|+|+++. +..|..+
T Consensus 665 YLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~-~~~~~~l 739 (1381)
T KOG0054|consen 665 YLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKS-GGDFAEL 739 (1381)
T ss_pred EEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhc-chhHHHH
Confidence 99999999999976 55567888778899999999999999999999999999999999999999965 4456655
No 67
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.8e-56 Score=540.60 Aligned_cols=464 Identities=16% Similarity=0.134 Sum_probs=321.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 395 VLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFV 474 (1050)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 474 (1050)
.++.++..++....+.+...++|..+++++++.|+.+|+++++|++++|+++|+..+...+.. +..++..++.++..++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~-l~~~~~~~~~~i~~~~ 140 (547)
T PRK10522 62 MAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVR-LPELVQGIILTLGSAA 140 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 456677888888889999999999999999999999999999999999999999998875443 3344444455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchH---HHHHHHHHHHHH
Q 001580 475 LIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAY---DRMADINGKSMD 551 (1050)
Q Consensus 475 ~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~---~~~~~~~~~~~~ 551 (1050)
+++.+++...+++++.+++.+++...+.+..+...+......+.+.+.+.|.++|+++++ ++.+ +++.+.+.+..+
T Consensus 141 ~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~ 219 (547)
T PRK10522 141 YLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQ 219 (547)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHH
Confidence 555555544444333333333333333333333333344556778889999999999995 4332 234444444333
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 552 KNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSL 631 (1050)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 631 (1050)
...+..................+..+ +++.+.+..+. .... -...++.+..+...+..++..+...........
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~ 293 (547)
T PRK10522 220 EYRHHIIRADTFHLSAVNWSNIMMLG---AIGLVFYMANS-LGWA--DTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQ 293 (547)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH-hhcC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33222111111111111111111100 11111111100 0000 001111222222334456777777777788889
Q ss_pred HHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHH
Q 001580 632 NAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLN 711 (1050)
Q Consensus 632 ~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~ 711 (1050)
.+.+|+.++.+.+.+.... ...+. +..+.++++||+|+|+++ +++|+|+||+|+|||++||+||||||||||++
T Consensus 294 ~a~~ri~~l~~~~~~~~~~--~~~~~---~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ 367 (547)
T PRK10522 294 VAFNKLNKLALAPYKAEFP--RPQAF---PDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSGKSTLAM 367 (547)
T ss_pred HHHHHHHHHhccccccccc--ccccc---CcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 9999999987554332110 11001 112469999999999743 36999999999999999999999999999999
Q ss_pred HHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCC
Q 001580 712 TLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLG 791 (1050)
Q Consensus 712 ~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~g 791 (1050)
+|+|+++|++|+|.+||.++.+.+...+|++|+|+||++.+|++|+++| ....+++++.++++.+++...+.. +.|
T Consensus 368 ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 443 (547)
T PRK10522 368 LLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDG 443 (547)
T ss_pred HHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-ccc
Confidence 9999999999999999999999999999999999999999999999998 223455566666666555444331 222
Q ss_pred cchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhhcCE
Q 001580 792 LDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDR 869 (1050)
Q Consensus 792 l~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~ 869 (1050)
. .+|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. .++|+|+||||++.+..||+
T Consensus 444 ~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~ 518 (547)
T PRK10522 444 R-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADR 518 (547)
T ss_pred C-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCE
Confidence 1 1367999999999999999999999999999999999999999999987654 47999999999999999999
Q ss_pred EEEEeCCEEEEe
Q 001580 870 ILLLDSGRVLEY 881 (1050)
Q Consensus 870 i~vl~~G~i~~~ 881 (1050)
|++|++|++++.
T Consensus 519 i~~l~~G~i~e~ 530 (547)
T PRK10522 519 LLEMRNGQLSEL 530 (547)
T ss_pred EEEEECCEEEEe
Confidence 999999999987
No 68
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.7e-57 Score=502.13 Aligned_cols=484 Identities=20% Similarity=0.262 Sum_probs=344.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 001580 387 YSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQV 466 (1050)
Q Consensus 387 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~ 466 (1050)
...+.+..-++..++++++.+.+.+...++...+|...++.|..--..-.... .-.|++++..++...-...+...
T Consensus 69 al~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q----~LrDL~qvR~Fltg~g~~A~fDa 144 (580)
T COG4618 69 ALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQ----PLRDLDQVRQFLTGTGLTAFFDA 144 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCcccc----chhhHHHHHHHHcCCCcchhcCC
Confidence 34455667788899999999999999999999999988766665432221111 12566777665543211111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHH
Q 001580 467 SQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADIN 546 (1050)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~ 546 (1050)
...-..+.+++.+.++..++.+.-.++++.+.++-....++--+.......+...+...+.++..+|+++++..+..+.+
T Consensus 145 PW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW 224 (580)
T COG4618 145 PWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRW 224 (580)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHH
Confidence 11111222333344444333332222222222222222222222223333445567778899999999998877666665
Q ss_pred HHHHHHHHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHH---HHHHHHH
Q 001580 547 GKSMDKNIR----YTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALN---ITSLLTA 619 (1050)
Q Consensus 547 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~---~~~~~~~ 619 (1050)
.+....... ..-.+..........-..+...+..+++ +.++ .+..+. |..++-.+. ...|+..
T Consensus 225 ~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA-~Lvi-~ge~t~--------G~mIA~SIl~gRaLaPid~ 294 (580)
T COG4618 225 GRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGA-WLVI-KGEITP--------GMMIAGSILSGRALAPIDL 294 (580)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcce-eeEE-cCcCCc--------chhhHHHHHhhhhhccHHH
Confidence 544443333 2222222221111111111112222222 2222 222222 222222222 2335555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEE
Q 001580 620 VLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIV 699 (1050)
Q Consensus 620 ~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~iv 699 (1050)
....|..+..+..+.+|+.+++...++.... .+.| ...+.+.++++++.=++..+++|+|+||.+.+||.+|||
T Consensus 295 aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~----m~LP--~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgII 368 (580)
T COG4618 295 AIANWKQFVAARQSYKRLNELLAELPAAAER----MPLP--APQGALSVERLTAAPPGQKKPILKGISFALQAGEALGII 368 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCccccCC----CCCC--CCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEE
Confidence 5667777788889999999998754432211 1111 235779999999976666678999999999999999999
Q ss_pred CCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCC-CCCHHHHHHHHHH
Q 001580 700 GRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEALER 778 (1050)
Q Consensus 700 G~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~ 778 (1050)
||||||||||.|+|.|.++|.+|.|++||-|+..++++++-++|||+||+..||+|||+|||.-+. +.+++.+.++++.
T Consensus 369 GPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~l 448 (580)
T COG4618 369 GPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARL 448 (580)
T ss_pred CCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999997554 6677889999999
Q ss_pred hcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEe
Q 001580 779 AHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLII 857 (1050)
Q Consensus 779 ~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~v 857 (1050)
++.++.|.++|+||||.+|+.|..|||||||||+|||||+.+|.+++||||-|+||.+-|+.+.++|.+.+ +|+|+|+|
T Consensus 449 AgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvvi 528 (580)
T COG4618 449 AGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVI 528 (580)
T ss_pred cChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999998865 68999999
Q ss_pred ecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 858 AHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 858 tH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|||.+.+..+|+|++|++|++..+|+.+|++++
T Consensus 529 aHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 529 AHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred ecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999999999999999875
No 69
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.4e-54 Score=573.54 Aligned_cols=529 Identities=18% Similarity=0.253 Sum_probs=370.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccccccCCCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 349 LLCYFLTETLRVSSSTWLSYWTDQSSLKTHG---PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSIL 425 (1050)
Q Consensus 349 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll 425 (1050)
+++.++...+....|..+...++........ ...+...++++.++..++.....+.....+.+....++..+|+|++
T Consensus 323 ~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L 402 (1522)
T TIGR00957 323 FCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKAL 402 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555566666655544322111111 1122223333333444444444555677888889999999999999
Q ss_pred cCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 426 RAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGI-VSTMSLWAIMPLLLLFYAAYLYYQST 504 (1050)
Q Consensus 426 ~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lll~~~~~~~~~~~~ 504 (1050)
++|..++++.+.|+++|+++.|+..+....... ..++...+.++..++++.. +++..+..+ .++++++++.....+.
T Consensus 403 ~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~-~~~~~~~~~i~~~~~ll~~~~g~~~l~~l-~~~~~~~~~~~~~~~~ 480 (1522)
T TIGR00957 403 VITNSARKSSTVGEIVNLMSVDAQRFMDLATYI-NMIWSAPLQVILALYFLWLNLGPSVLAGV-AVMVLMVPLNAVMAMK 480 (1522)
T ss_pred hCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998755433 3333333333333322222 222222222 2222223333333333
Q ss_pred HHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH-HH
Q 001580 505 AREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWL-TA 583 (1050)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~ 583 (1050)
.+..++..........+.+.|.++|+++||+|++++.+.+.+.+..+...+..........+..+.......++.++ ++
T Consensus 481 ~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 560 (1522)
T TIGR00957 481 TKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFA 560 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444556668899999999999999999988877776655544433322222222221111111111111 11
Q ss_pred HHHHHh-cCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCC
Q 001580 584 TFAVVQ-NGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPS 662 (1050)
Q Consensus 584 ~~~v~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~ 662 (1050)
.+.+.. ++.++...+|.+ ++++..+..++..+......+..+..+.+|+.++++.+++.+...+.....+ ..
T Consensus 561 ~~~~~~~~~~l~~~~~f~~-----l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~--~~ 633 (1522)
T TIGR00957 561 VYVTVDENNILDAEKAFVS-----LALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKP--GE 633 (1522)
T ss_pred HHHHhcCCCCcCHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccccccCC--CC
Confidence 222222 223333322222 2333445567777888888889999999999999976644321111000000 11
Q ss_pred CccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhh
Q 001580 663 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKI 742 (1050)
Q Consensus 663 ~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~ 742 (1050)
.+.++++|++|+|++..+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 634 ~~~i~~~~~~~~~~~~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~ 700 (1522)
T TIGR00957 634 GNSITVHNATFTWARDLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG-------------S 700 (1522)
T ss_pred CCcEEEEEeEEEcCCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------------E
Confidence 236999999999975445799999999999999999999999999999999999999999999997 5
Q ss_pred eEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 743 LGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 743 i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
|+||||+|++|++||++||.++.+.+++++.++++.|++.+.+..+|.|++|.+|++|.+||||||||++||||++++|+
T Consensus 701 i~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~ 780 (1522)
T TIGR00957 701 VAYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNAD 780 (1522)
T ss_pred EEEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999876667778889999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHH---HcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHH
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIRE---EFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMV 899 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~---~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 899 (1050)
|+|||||||+||+.+++.+.+.+.+ ..+++|+|+|||+++.+..||+|++|++|++++.|+++++.++. +.|..+.
T Consensus 781 illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~-~~~~~l~ 859 (1522)
T TIGR00957 781 IYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRD-GAFAEFL 859 (1522)
T ss_pred EEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcc-hhHHHHH
Confidence 9999999999999999999998863 44689999999999999999999999999999999999998753 4566655
Q ss_pred H
Q 001580 900 Q 900 (1050)
Q Consensus 900 ~ 900 (1050)
.
T Consensus 860 ~ 860 (1522)
T TIGR00957 860 R 860 (1522)
T ss_pred H
Confidence 4
No 70
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.8e-52 Score=551.88 Aligned_cols=483 Identities=18% Similarity=0.260 Sum_probs=352.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 001580 387 YSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQV 466 (1050)
Q Consensus 387 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~ 466 (1050)
++++.++..++.....+.....+.+....+...+|+|+++++...+++.++|+++|++++|+..+...+......+..++
T Consensus 128 ~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi 207 (1490)
T TIGR01271 128 LCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPL 207 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 33444555566666667777778888888889999999999999999999999999999999999987766554444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHH
Q 001580 467 SQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADIN 546 (1050)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~ 546 (1050)
..++..+++...+++..++.++.+++ ++++..+..+.....++.......+....+.|.++|+++||.|++++.+.+.+
T Consensus 208 ~i~~~~~lL~~~~G~~~l~~l~v~~~-~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i 286 (1490)
T TIGR01271 208 QVILLMGLIWELLEVNGFCGLGFLIL-LALFQACLGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKII 286 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHH
Confidence 34444444434444444333333333 33333333333344444444555667788999999999999999999988877
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 001580 547 GKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMI-WLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLL-TAVLRLA 624 (1050)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~~~~~ 624 (1050)
.+..+...+..........+..........++. ..++.+.+. ++ .+....|+. ++++..+..++ ..++...
T Consensus 287 ~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~y~~~-~~-~~~~~~ft~-----lal~~lL~~~l~~~lp~~~ 359 (1490)
T TIGR01271 287 KNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFLSVVPYALI-KG-IILRRIFTT-----ISYCIVLRMTVTRQFPGAI 359 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CC-CcHHHHHHH-----HHHHHHHHHHHHHHHHHHH
Confidence 766665544433322222222211111111111 111122222 11 222222221 23333333343 4567777
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCC--------------------------
Q 001580 625 SLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-------------------------- 678 (1050)
Q Consensus 625 ~~~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-------------------------- 678 (1050)
..+..+..+++|+.+++..++..+... . .....++++|++|.|+..
T Consensus 360 ~~~~~a~~s~~RI~~fL~~~e~~~~~~--~------~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1490)
T TIGR01271 360 QTWYDSLGAITKIQDFLCKEEYKTLEY--N------LTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFF 431 (1490)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccccc--c------CCCCceEEecceEecCCccccccccccccccccccccccccccc
Confidence 778888999999999997654321100 0 012247888888888421
Q ss_pred ------CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCccc
Q 001580 679 ------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVL 752 (1050)
Q Consensus 679 ------~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l 752 (1050)
.+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| +|+||||+|++
T Consensus 432 ~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~~~~~G~i~~~g-------------~iayv~Q~~~l 498 (1490)
T TIGR01271 432 SNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGELEPSEGKIKHSG-------------RISFSPQTSWI 498 (1490)
T ss_pred cccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECC-------------EEEEEeCCCcc
Confidence 13589999999999999999999999999999999999999999999997 49999999999
Q ss_pred ccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcC
Q 001580 753 FSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAA 832 (1050)
Q Consensus 753 f~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~ 832 (1050)
|++||++||.++....++++.++++.|++.+.++.+|.|++|.+|++|.+|||||||||+||||++++|+||||||||++
T Consensus 499 ~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~sa 578 (1490)
T TIGR01271 499 MPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTH 578 (1490)
T ss_pred CCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 99999999987665666678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHH-HHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHH
Q 001580 833 VDVRTDALIQK-TIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMV 899 (1050)
Q Consensus 833 LD~~~~~~i~~-~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 899 (1050)
||+.+.+.+.+ ++.+..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+.. ..|....
T Consensus 579 LD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~~~-~~~~~~~ 645 (1490)
T TIGR01271 579 LDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQAKR-PDFSSLL 645 (1490)
T ss_pred CCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHhcC-hHHHHHH
Confidence 99999999987 567776799999999999999889999999999999999999998753 3444433
No 71
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=9.1e-53 Score=516.67 Aligned_cols=509 Identities=15% Similarity=0.141 Sum_probs=360.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhccccccCCCChh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 345 VLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPL-----FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDA 419 (1050)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 419 (1050)
+++.+++.++...+....+.+.....+.......... .+.++++++++...+..++..++......+...+++..
T Consensus 98 l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~ 177 (659)
T TIGR00954 98 LILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYSK 177 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555556666667676666554332111111 11222233334455555666666666667777778888
Q ss_pred HHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 001580 420 MLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGI-VSTMSLWAIMPLLLLFYAAY 498 (1050)
Q Consensus 420 l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lll~~~~~~ 498 (1050)
.+++....+..+|++ ++|++.+|+++|++.+...+...+..++..++.++...+.+.. ..+...++++.++++.+.+.
T Consensus 178 ~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i~ 256 (659)
T TIGR00954 178 YLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVVL 256 (659)
T ss_pred HhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 888877888888886 7899999999999999988877777777777666655544443 44444444444444444444
Q ss_pred HHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH---
Q 001580 499 LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVG--- 575 (1050)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 575 (1050)
.++.+......+......+.+.+...|.++|+++|++|+.++...+.+.+..+...+..........+......++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~~ 336 (659)
T TIGR00954 257 TKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKYT 336 (659)
T ss_pred HHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 55566666666666677788899999999999999999999887777666666555444443333333333333322
Q ss_pred -HHHHHHHHHH-HHHhc----CccchhhhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 001580 576 -GLMIWLTATF-AVVQN----GSAENQEAFASTMGLLLSY---ALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSE 646 (1050)
Q Consensus 576 -~l~~~~~~~~-~v~~~----~~~~~~~~~~~~~g~~l~~---~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e 646 (1050)
..+.++++.. .+... +..+. ...++.++.+ +..+..++..+......++....+.+|+.++++.+++
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~g~~t~----g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~ 412 (659)
T TIGR00954 337 WSAVGLVAVSIPIFDKTHPAFLEMSE----EELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDD 412 (659)
T ss_pred HHHHHHHHHHHHHHhcccccccccCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222 22211 22211 1122222322 3445667777777778888899999999999875332
Q ss_pred Cc-------cccC--CC----C----C---CCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCH
Q 001580 647 AP-------LVIE--SN----R----P---PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGK 706 (1050)
Q Consensus 647 ~~-------~~~~--~~----~----~---~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGK 706 (1050)
.. ...+ .. . . .......+.|+++||+|.|+++ +++|+|+||+|++||++||+|||||||
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGK 491 (659)
T TIGR00954 413 VKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGK 491 (659)
T ss_pred HhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCH
Confidence 10 0000 00 0 0 0000123469999999999643 369999999999999999999999999
Q ss_pred HHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCC--------CCCHHHHHHHHHH
Q 001580 707 SSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS--------EHSDADLWEALER 778 (1050)
Q Consensus 707 STll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~--------~~~~~~~~~~l~~ 778 (1050)
|||+++|+|+++|++|+|.+++ |++++||||+|.+|++|+++|+.+.. ..+++++.++++.
T Consensus 492 STLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~ 560 (659)
T TIGR00954 492 SSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDN 560 (659)
T ss_pred HHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHH
Confidence 9999999999999999998863 56899999999999999999997532 2457788999999
Q ss_pred hcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEee
Q 001580 779 AHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIA 858 (1050)
Q Consensus 779 ~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vt 858 (1050)
+++.+++++ |.|++|..+ .+.+||||||||++||||++++|++|||||||++||+++++.+++.+++ .++|+|+||
T Consensus 561 ~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~--~~~tvI~is 636 (659)
T TIGR00954 561 VQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCRE--FGITLFSVS 636 (659)
T ss_pred cCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHH--cCCEEEEEe
Confidence 999999988 999999876 4678999999999999999999999999999999999999999999987 489999999
Q ss_pred cCchhhhhcCEEEEEe
Q 001580 859 HRLNTIIDCDRILLLD 874 (1050)
Q Consensus 859 H~~~~~~~~d~i~vl~ 874 (1050)
||++++..||++++|+
T Consensus 637 H~~~~~~~~d~il~l~ 652 (659)
T TIGR00954 637 HRKSLWKYHEYLLYMD 652 (659)
T ss_pred CchHHHHhCCEEEEEe
Confidence 9999998899999997
No 72
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=9.4e-51 Score=535.58 Aligned_cols=532 Identities=18% Similarity=0.230 Sum_probs=371.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccccCCCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 347 ILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHG---PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHS 423 (1050)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 423 (1050)
+.+++.++...+....|..+..+.+........ ...+...+++..++..++.....+.....+.+....+...+|+|
T Consensus 248 ~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K 327 (1560)
T PTZ00243 248 WQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNALIFEK 327 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555556665555443321111111 11122223333444555555666777778888888999999999
Q ss_pred HHcCCchhhc--ccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 424 ILRAPMVFFH--TNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 501 (1050)
Q Consensus 424 ll~~p~~ff~--~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~~~~~~~~~ 501 (1050)
+++.+...+. +.+.|+++|.++.|++.+...+......+..++..+++.+++...+++..++.++.++++ +++..+.
T Consensus 328 ~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~-~pl~~~~ 406 (1560)
T PTZ00243 328 CFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVT-LPLNGAI 406 (1560)
T ss_pred HHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHH
Confidence 9999988876 568999999999999999998866665555555445545555555555555444444333 3333333
Q ss_pred HHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 001580 502 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWL 581 (1050)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 581 (1050)
.+.....++..............|.++|+++||.+++|+.+.+.+.+..+...+..........+..+.......++..+
T Consensus 407 ~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~p~l~~~~ 486 (1560)
T PTZ00243 407 MKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFVNNATPTLMIAV 486 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444444555667889999999999999999998888877666555443333333333333222222222211
Q ss_pred -HHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCccc---c-C----
Q 001580 582 -TATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLV---I-E---- 652 (1050)
Q Consensus 582 -~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~~~e~~~~---~-~---- 652 (1050)
++.+.+ .++.++....|+ .++++..+..++..++.....+.....+++|+.++++.++..+.. . +
T Consensus 487 ~f~~y~~-~g~~Lt~~~vft-----~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~ 560 (1560)
T PTZ00243 487 VFTVYYL-LGHELTPEVVFP-----TIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYWRE 560 (1560)
T ss_pred HHHHHHH-hCCCCCHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccchhhccc
Confidence 122222 244555444332 344445556677777788888888999999999999765421000 0 0
Q ss_pred --------C-----CC-------C---------------------------CCCCCCCccEEEEEEEEEeC---------
Q 001580 653 --------S-----NR-------P---------------------------PPGWPSSGSIKFEDVVLRYR--------- 676 (1050)
Q Consensus 653 --------~-----~~-------~---------------------------~~~~~~~~~i~~~~v~~~y~--------- 676 (1050)
. .. + +..+...+.+.++|++++++
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (1560)
T PTZ00243 561 QREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHIVE 640 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccccccccccccccccccccc
Confidence 0 00 0 00001112466667666531
Q ss_pred -----------------------------CCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEEC
Q 001580 677 -----------------------------PELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILID 727 (1050)
Q Consensus 677 -----------------------------~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~ 727 (1050)
.+.+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++
T Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~~~ 720 (1560)
T PTZ00243 641 GGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVWAE 720 (1560)
T ss_pred ccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEEC
Confidence 112358999999999999999999999999999999999999999999864
Q ss_pred CeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhH
Q 001580 728 GFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 807 (1050)
Q Consensus 728 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq 807 (1050)
++|+|+||+|++|++||++||.++.....+++.++++.+++.+.++.+|.|++|.+++++.+|||||
T Consensus 721 -------------~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LSGGQ 787 (1560)
T PTZ00243 721 -------------RSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLSGGQ 787 (1560)
T ss_pred -------------CeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCCHHH
Confidence 4799999999999999999999876555567888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHH-HHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhH
Q 001580 808 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQK-TIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEE 886 (1050)
Q Consensus 808 ~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~e 886 (1050)
||||+||||++.+|+||||||||++||+.+.+.+.+ ++....+++|+|+|||+++.+..||+|++|++|++++.|++++
T Consensus 788 kqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~~~~ 867 (1560)
T PTZ00243 788 KARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVEFSGSSAD 867 (1560)
T ss_pred HHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 999999999999999999999999999998777765 4555557899999999999998899999999999999999999
Q ss_pred HhhcCCChHHHHHH
Q 001580 887 LLSNEGSSFSKMVQ 900 (1050)
Q Consensus 887 l~~~~~~~~~~~~~ 900 (1050)
+++. +.|..+..
T Consensus 868 l~~~--~~~~~~~~ 879 (1560)
T PTZ00243 868 FMRT--SLYATLAA 879 (1560)
T ss_pred HHhC--hHHHHHHH
Confidence 9864 24555443
No 73
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=6.5e-54 Score=477.81 Aligned_cols=200 Identities=22% Similarity=0.320 Sum_probs=166.1
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.+.+.||+|.|.++. .++++++|-|.+++++++|||||+|||||+++++|.+.|+.|.|.-.-. .+++
T Consensus 389 vi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKLP 456 (614)
T ss_pred eEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccch
Confidence 489999999998654 7899999999999999999999999999999999999999999976522 2355
Q ss_pred EEcCCcc---cccccHHHhccc-CC-CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 745 IIPQSPV---LFSGTVRFNLDP-FS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 745 ~v~Q~~~---lf~~tv~~nl~~-~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
+..|+-. .+..+.-+++.+ +. ....+++...+.++|+.......|. .+||+|||.||++||++++
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p~----------~~LS~Gqr~rVlFa~l~~k 526 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVPM----------SQLSDGQRRRVLFARLAVK 526 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccch----------hhcccccchhHHHHHHHhc
Confidence 5566542 334466666643 33 2456778888999888765555553 4799999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEe-cChhHHh
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY-DTPEELL 888 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~-g~~~el~ 888 (1050)
.|.+|||||||+|||.++...+.++|.+ ..++||+||||...+.. +++|++.++|.+... |.+....
T Consensus 527 qP~lLlLDEPtnhLDi~tid~laeaiNe--~~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~yk 595 (614)
T KOG0927|consen 527 QPHLLLLDEPTNHLDIETIDALAEAINE--FPGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEIYK 595 (614)
T ss_pred CCcEEEecCCCcCCCchhHHHHHHHHhc--cCCceeeeechhhHHHHHHHHhHhhccCceeecCccHHHHH
Confidence 9999999999999999999999999998 67889999999999988 999999999887653 6665543
No 74
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.2e-50 Score=447.37 Aligned_cols=200 Identities=20% Similarity=0.308 Sum_probs=166.3
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhhe
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 743 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i 743 (1050)
..+++.+|+|.|.++..+.+.++++.+.--+++++||+||+||||+++++.|...|..|.+.+.+ |.+|
T Consensus 361 p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ri 429 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLRI 429 (582)
T ss_pred CeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------ccee
Confidence 35999999999987654789999999999999999999999999999999999999999988763 6789
Q ss_pred EEEcCCcccc-cccHH--Hhcc-cCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 744 GIIPQSPVLF-SGTVR--FNLD-PFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 744 ~~v~Q~~~lf-~~tv~--~nl~-~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
+|..|.-.=+ +.++. +-+. .+...+++++++.+...|+...+..-+ ...||||||-||++|.....
T Consensus 430 ~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s----------i~~LSGGQKsrvafA~~~~~ 499 (582)
T KOG0062|consen 430 KYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS----------IASLSGGQKSRVAFAACTWN 499 (582)
T ss_pred cchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc----------ccccCCcchhHHHHHHHhcC
Confidence 9999987533 22322 1111 122337889999998877765544322 25699999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEe-cChhH
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEY-DTPEE 886 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~-g~~~e 886 (1050)
+|.+|+|||||++||.++...+-++|+. .++.||+||||.+++.. |+.+|+.++|+|... |+..+
T Consensus 500 ~PhlLVLDEPTNhLD~dsl~AL~~Al~~--F~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~~~~ 566 (582)
T KOG0062|consen 500 NPHLLVLDEPTNHLDRDSLGALAKALKN--FNGGVVLVSHDEEFISSLCKELWVVEDGKVTPIEGGIDK 566 (582)
T ss_pred CCcEEEecCCCccccHHHHHHHHHHHHh--cCCcEEEEECcHHHHhhcCceeEEEcCCcEEeeeccHHH
Confidence 9999999999999999999999999988 56679999999999988 999999999999764 44433
No 75
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.6e-50 Score=465.14 Aligned_cols=263 Identities=28% Similarity=0.452 Sum_probs=232.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCC-CCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCc
Q 001580 4 VAWQVVNANVSLKRMEEFLLAEEKILLPNPPLT-SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 82 (1050)
Q Consensus 4 ~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~-~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsG 82 (1050)
..+.+.++--+-+|+-+|++.+...+......+ .-.-.|+|+||+|+||.+++.++|+|+||+|+|||.+|||||||+|
T Consensus 427 ~ys~lmkgvGAs~rvFel~dr~P~i~~~G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsG 506 (716)
T KOG0058|consen 427 FYSELMKGVGASERVFELMDRKPRIPLTGTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSG 506 (716)
T ss_pred HHHHHHHhcchHHHHHHHhccCCCCCCCCccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCC
Confidence 345677778889999999998775543221111 2233599999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcHHH
Q 001580 83 KTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHD 149 (1050)
Q Consensus 83 KSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~~~ 149 (1050)
|||+.++|..+|+|++|.+.. +|++||+|.|+|.||++||+|||.+|.. .+.+++..+++.++.+++
T Consensus 507 KSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~F 586 (716)
T KOG0058|consen 507 KSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEF 586 (716)
T ss_pred HHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHH
Confidence 999999999999999987642 4667999999999999999999999965 356788889999999999
Q ss_pred HhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcch
Q 001580 150 LDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHF 229 (1050)
Q Consensus 150 ~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~ 229 (1050)
+..+|+|++|.|||+|.+|||||||||||||||+++|.||||||.||+||.+++..+.+.+-+ ..+++|||+|+|+++.
T Consensus 587 I~~~p~gY~T~VGEkG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~-~~~~rTVlvIAHRLST 665 (716)
T KOG0058|consen 587 ITNFPDGYNTVVGEKGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDR-LMQGRTVLVIAHRLST 665 (716)
T ss_pred HHhCccccccccCCccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHH-hhcCCeEEEEehhhhH
Confidence 999999999999999999999999999999999999999999999999999999988776543 3457999999999999
Q ss_pred hhhcCEEEEEcCCeEeeccChhhhhcCh-HHHHHHHHHh
Q 001580 230 LSQVDRIILVHEGMVKEEGTFEDLSNNG-ELFQKLMENA 267 (1050)
Q Consensus 230 l~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~~~~l~~~~ 267 (1050)
+++||+|+++++|++++.|+++|+++++ +.|.+++..+
T Consensus 666 V~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~gly~~Lv~~q 704 (716)
T KOG0058|consen 666 VRHADQIVVIDKGRVVEMGTHDELLSKPNGLYAKLVQRQ 704 (716)
T ss_pred hhhccEEEEEcCCeEEecccHHHHhhCcccHHHHHHHHh
Confidence 9999999999999999999999999987 7999998754
No 76
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-50 Score=401.24 Aligned_cols=214 Identities=29% Similarity=0.485 Sum_probs=186.8
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC-CChHHHhhheE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK-FGLMDLRKILG 744 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~-~~~~~~r~~i~ 744 (1050)
|+++||+++|+.. .+|+|||++|.+||+++|+||||||||||||||.|+-+|++|+|.++|.++.. .+...+|+++|
T Consensus 3 i~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vG 80 (240)
T COG1126 3 IEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVG 80 (240)
T ss_pred EEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcC
Confidence 8999999999754 79999999999999999999999999999999999999999999999987743 36778999999
Q ss_pred EEcCCcccccc-cHHHhcccCC----CCCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFS----EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~----~~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
+|+|+..||.. |+.+|+.... ..+.+ ...+.|+++++.+- ....+.+||||||||+||||
T Consensus 81 mVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~k-----------a~~yP~qLSGGQqQRVAIAR 149 (240)
T COG1126 81 MVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADK-----------ADAYPAQLSGGQQQRVAIAR 149 (240)
T ss_pred eecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhh-----------hhhCccccCcHHHHHHHHHH
Confidence 99999999976 9999997532 22222 23334445554444 44445789999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 892 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 892 (1050)
||.-+|+++|+|||||+|||+....+.+.++++. .|.|+|+|||+|.++.. ||||+.|++|+|++.|+|+++..++.
T Consensus 150 ALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 150 ALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred HHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 9999999999999999999999999999999976 47899999999999988 99999999999999999999998764
No 77
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7e-49 Score=431.42 Aligned_cols=238 Identities=35% Similarity=0.688 Sum_probs=221.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.|+++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ ++|+|.++|.++..++...+|+.|+
T Consensus 2 ~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~ 80 (275)
T cd03289 2 QMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFG 80 (275)
T ss_pred eEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEE
Confidence 589999999996444579999999999999999999999999999999999998 7899999999999999999999999
Q ss_pred EEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 001580 745 IIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 824 (1050)
Q Consensus 745 ~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~il 824 (1050)
|+||++.+|++|+++|++++...++++++++++.+++.+++.++|.++++.+++.+.+||||||||++||||++++|+||
T Consensus 81 ~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~il 160 (275)
T cd03289 81 VIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKIL 160 (275)
T ss_pred EECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999876656788899999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHHHhhcc
Q 001580 825 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQSTGA 904 (1050)
Q Consensus 825 lLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~~~ 904 (1050)
||||||++||+.+.+.+++.|++...++|||+|||+++++..||||++|++|++++.|+|+++++.. +.|.+++.....
T Consensus 161 llDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~-~~~~~~~~~~~~ 239 (275)
T cd03289 161 LLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEK-SHFKQAISPSDR 239 (275)
T ss_pred EEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCc-HHHHHHHhhcch
Confidence 9999999999999999999999887789999999999999889999999999999999999999853 567777765543
No 78
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2e-48 Score=470.90 Aligned_cols=261 Identities=30% Similarity=0.509 Sum_probs=232.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCC--CCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCC
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLPN--PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTG 80 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~--~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nG 80 (1050)
.....+.+++++.+|+.+.++.|...+... ...++....|+++|++|+|+.. +.++|+|+||+|++||++||||+||
T Consensus 431 ~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SG 509 (709)
T COG2274 431 QLWTDFQQAKVALERLGDILDTPPEQEGDKTLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSG 509 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccccccccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCC
Confidence 456778899999999999999886433222 1222333469999999999854 3479999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCCCC-HHHHHHHHHHhCcH
Q 001580 81 EGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSAFE-PARYEKAIDVTSLQ 147 (1050)
Q Consensus 81 sGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~~~-~~~~~~~~~~~~l~ 147 (1050)
||||||+|+|+|+++|+.|.+.. +|+.||||+|++.+|++||+|||.++.+.. .++...+++.++.+
T Consensus 510 sGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~ 589 (709)
T COG2274 510 SGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAH 589 (709)
T ss_pred CCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcH
Confidence 99999999999999999887643 456799999999999999999999997654 47888899999999
Q ss_pred HHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCc
Q 001580 148 HDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQL 227 (1050)
Q Consensus 148 ~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~ 227 (1050)
+++..+|.|++|.+||+|.+||||||||++|||||+++|+|||||||||+||+++++.+.+.+.+. .+|+|+|+|||++
T Consensus 590 ~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~-~~~~T~I~IaHRl 668 (709)
T COG2274 590 EFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQI-LQGRTVIIIAHRL 668 (709)
T ss_pred HHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHH-hcCCeEEEEEccc
Confidence 999999999999999999999999999999999999999999999999999999999999988654 4679999999999
Q ss_pred chhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHH
Q 001580 228 HFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLME 265 (1050)
Q Consensus 228 ~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 265 (1050)
..+..||||++|++|+|+++|+++|+++.++.|.+++.
T Consensus 669 ~ti~~adrIiVl~~Gkiv~~gs~~ell~~~g~y~~l~~ 706 (709)
T COG2274 669 STIRSADRIIVLDQGKIVEQGSHEELLAQGGLYARLYQ 706 (709)
T ss_pred hHhhhccEEEEccCCceeccCCHHHHHHhcChHHHHHh
Confidence 99999999999999999999999999999888888764
No 79
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.3e-48 Score=472.24 Aligned_cols=260 Identities=28% Similarity=0.422 Sum_probs=227.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCCC-CCC-CCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCC
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLPNP-PLT-SGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTG 80 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~-~~~-~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nG 80 (1050)
..++.+.++++|++||.++++.++....... +.+ +....|+++|++|.|+. ++++|+|+||++++|+++||||+||
T Consensus 309 ~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SG 386 (588)
T PRK11174 309 TFYHAKAQAVGAAESLVTFLETPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSG 386 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCC
Confidence 4566788999999999999987653211111 111 12235999999987753 3679999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcH
Q 001580 81 EGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQ 147 (1050)
Q Consensus 81 sGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~ 147 (1050)
||||||+++|+|++ |++|.+.. +++.|+||||+|++|++||+|||.+|.+ .+++++.++++.+++.
T Consensus 387 sGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~ 465 (588)
T PRK11174 387 AGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVS 465 (588)
T ss_pred CCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHH
Confidence 99999999999999 88776532 2346999999999999999999999954 6788999999999999
Q ss_pred HHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCc
Q 001580 148 HDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQL 227 (1050)
Q Consensus 148 ~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~ 227 (1050)
+++..+|+|++|.+|++|.+||||||||++|||||+++|+|||||||||+||+++++.+.+.+.+. .+++|+|+|||++
T Consensus 466 ~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~-~~~~TvIiItHrl 544 (588)
T PRK11174 466 EFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAA-SRRQTTLMVTHQL 544 (588)
T ss_pred HHHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHH-hCCCEEEEEecCh
Confidence 999999999999999999999999999999999999999999999999999999999999877554 4689999999999
Q ss_pred chhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHH
Q 001580 228 HFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMEN 266 (1050)
Q Consensus 228 ~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~ 266 (1050)
+.+..+|+|++|++|+++++|+++++.++.+.|+.++..
T Consensus 545 ~~i~~aD~Iivl~~G~i~e~G~~~eL~~~~~~y~~l~~~ 583 (588)
T PRK11174 545 EDLAQWDQIWVMQDGQIVQQGDYAELSQAGGLFATLLAH 583 (588)
T ss_pred HHHHhCCEEEEEeCCeEeecCCHHHHHhcchHHHHHHHH
Confidence 999999999999999999999999999888889888754
No 80
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-48 Score=408.40 Aligned_cols=220 Identities=31% Similarity=0.453 Sum_probs=190.3
Q ss_pred EEEEEEEEEeCCC---CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---H
Q 001580 666 IKFEDVVLRYRPE---LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L 739 (1050)
Q Consensus 666 i~~~~v~~~y~~~---~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~ 739 (1050)
|++++|++.|... ...+|+||||+|++||++||+|+||||||||+|++.++-+|++|+|.+||.|+..++... +
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999752 246999999999999999999999999999999999999999999999999988777554 5
Q ss_pred hhheEEEcCCccccc-ccHHHhcccCC---CCCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 001580 740 RKILGIIPQSPVLFS-GTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 811 (1050)
Q Consensus 740 r~~i~~v~Q~~~lf~-~tv~~nl~~~~---~~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl 811 (1050)
|++||+++|++.|++ .||.+|+.+.- ..+. .++.+.|+.+++.+...+ .+.+|||||||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~-----------yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADR-----------YPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhcc-----------CchhcCcchhhHH
Confidence 788999999999997 59999997532 1222 345555555555555444 4578999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 812 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 812 ~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
+|||||+.+|+|||+|||||+|||+|.+.|.+.|++.. -|-||++|||.|+.+++ ||||.||++|+++|.|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999999864 37899999999999998 9999999999999999999999
Q ss_pred hcCCChHH
Q 001580 889 SNEGSSFS 896 (1050)
Q Consensus 889 ~~~~~~~~ 896 (1050)
.++.....
T Consensus 231 ~~Pk~~~t 238 (339)
T COG1135 231 ANPKHAIT 238 (339)
T ss_pred cCcchHHH
Confidence 87754433
No 81
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7.6e-47 Score=470.44 Aligned_cols=260 Identities=27% Similarity=0.370 Sum_probs=229.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGE 81 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGs 81 (1050)
...+.++.+++++++|+.++++.++..........+....|+++|++|+|+.. ++++|+|+||+|++||++||||+|||
T Consensus 412 ~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGs 490 (686)
T TIGR03797 412 SNTLISILAVIPLWERAKPILEALPEVDEAKTDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGS 490 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccCcCCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCC
Confidence 45678888999999999999987643221111111112359999999999743 46899999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHH
Q 001580 82 GKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHD 149 (1050)
Q Consensus 82 GKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~ 149 (1050)
|||||+++|+|+++|++|.+.. +++.||||||+|++|++||+|||.++.+.+++++.++++.+++.++
T Consensus 491 GKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~ 570 (686)
T TIGR03797 491 GKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAED 570 (686)
T ss_pred CHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHH
Confidence 9999999999999999887542 2456999999999999999999999977778889999999999999
Q ss_pred HhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcch
Q 001580 150 LDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHF 229 (1050)
Q Consensus 150 ~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~ 229 (1050)
++.+|.|++|.+|++|.+||||||||++|||||+++|++||||||||+||+.+++.+.+.+.+. ++|+|+|||+++.
T Consensus 571 i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~~ 647 (686)
T TIGR03797 571 IRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLST 647 (686)
T ss_pred HHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChHH
Confidence 9999999999999999999999999999999999999999999999999999999999988664 5899999999999
Q ss_pred hhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHH
Q 001580 230 LSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLME 265 (1050)
Q Consensus 230 l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 265 (1050)
+..+|+|++|++|+++++|+++++.+..+.|..+..
T Consensus 648 i~~~D~Iivl~~G~iv~~G~~~~Ll~~~~~y~~l~~ 683 (686)
T TIGR03797 648 IRNADRIYVLDAGRVVQQGTYDELMAREGLFAQLAR 683 (686)
T ss_pred HHcCCEEEEEECCEEEEECCHHHHHhCCcHHHHHHH
Confidence 999999999999999999999999988888888765
No 82
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-47 Score=389.99 Aligned_cols=219 Identities=32% Similarity=0.523 Sum_probs=192.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+|+||||+|.+. .+++|+||+|++||.+.++|||||||||++++|.|+++|++|+|+++|.+++++++..+|++|||
T Consensus 2 I~~~nvsk~y~~~--~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGNK--KAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCCc--eeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 7899999999743 79999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCcccccc-cHHHhcccCCC---CCH----HHHHHHHHHhcHH--HHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSE---HSD----ADLWEALERAHLK--DAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~---~~~----~~~~~~l~~~~~~--~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
|-|...||.. ||.+||..... .+. .++.+.++..++. ++..+ .+..|||||+|||.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~R-----------yP~eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADR-----------YPHELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhc-----------CchhcCcchhhHHHHHH
Confidence 9999999976 99999975322 223 3344455555442 34444 45789999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 892 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 892 (1050)
||+.+|+|||+|||+++|||.++..+++.+.++.+ ++|+|+||||++++.. +|||.+|++|+++.+++|+++++++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 99999999999999999999999999999988653 7999999999999766 99999999999999999999999876
Q ss_pred ChHHH
Q 001580 893 SSFSK 897 (1050)
Q Consensus 893 ~~~~~ 897 (1050)
..|-.
T Consensus 229 n~FV~ 233 (309)
T COG1125 229 NDFVE 233 (309)
T ss_pred HHHHH
Confidence 55543
No 83
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-46 Score=427.36 Aligned_cols=258 Identities=29% Similarity=0.482 Sum_probs=226.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCC-CCCCCCcEEE--EeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCc
Q 001580 6 WQVVNANVSLKRMEEFLLAEEKILLPNPP-LTSGLPAISI--RNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 82 (1050)
Q Consensus 6 ~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~-~~~~~~~i~~--~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsG 82 (1050)
+.-.++..+.+++..|++.|........+ .....+.+++ +|++|.|+++ +++++|+||++++|++++|||+||||
T Consensus 282 H~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaG 359 (559)
T COG4988 282 HAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAG 359 (559)
T ss_pred HHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCC
Confidence 44556788899999999988754322221 2223234455 5999999853 38999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcHHH
Q 001580 83 KTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHD 149 (1050)
Q Consensus 83 KSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~~~ 149 (1050)
||||+++|+|+.+|++|...+ ++++++||||+|.+|.+|++|||.++.+ .+++++.++++.+++.+.
T Consensus 360 KSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~ 439 (559)
T COG4988 360 KSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEF 439 (559)
T ss_pred HHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHh
Confidence 999999999999999877643 4567999999999999999999999976 456888899999999999
Q ss_pred HhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcch
Q 001580 150 LDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHF 229 (1050)
Q Consensus 150 ~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~ 229 (1050)
++. |+|.+|.+||+|..|||||+|||+|||||+++++++||||||+|||+++++.+.+.+.+.. +++|+|+|||+++.
T Consensus 440 v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~-~~ktvl~itHrl~~ 517 (559)
T COG4988 440 VPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELA-KQKTVLVITHRLED 517 (559)
T ss_pred hcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHH-hCCeEEEEEcChHH
Confidence 998 9999999999999999999999999999999999999999999999999999999877654 45999999999999
Q ss_pred hhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHHh
Q 001580 230 LSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENA 267 (1050)
Q Consensus 230 l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~ 267 (1050)
+..+|+|++|++|++++.|+++++..+.+.|+.+...+
T Consensus 518 ~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~q 555 (559)
T COG4988 518 AADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQQ 555 (559)
T ss_pred HhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHHH
Confidence 99999999999999999999999999999999998754
No 84
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.5e-46 Score=465.58 Aligned_cols=259 Identities=26% Similarity=0.411 Sum_probs=225.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCC-CCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPNPPL-TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTG 80 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~-~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nG 80 (1050)
+..+..+.++.++++|+.++++.++....+.... .+....|+++|++|+|+..+++++|+|+||+|++||+++|||+||
T Consensus 438 ~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SG 517 (711)
T TIGR00958 438 SYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSG 517 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCC
Confidence 4567788999999999999998765332111111 122235999999999986555789999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcH
Q 001580 81 EGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQ 147 (1050)
Q Consensus 81 sGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~ 147 (1050)
||||||+++|+|+++|++|.+.. .++.|+||||+|++|++||+|||.+|.+ .+++++.++++.+++.
T Consensus 518 sGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~ 597 (711)
T TIGR00958 518 SGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAH 597 (711)
T ss_pred CCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCH
Confidence 99999999999999999886643 2346999999999999999999999854 4567888999999999
Q ss_pred HHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCc
Q 001580 148 HDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQL 227 (1050)
Q Consensus 148 ~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~ 227 (1050)
+.++.+|+|++|.+|++|.+||||||||++|||||+++|+|||||||||+||+++++.+.+ .. ..+++|+|+|||++
T Consensus 598 ~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl 674 (711)
T TIGR00958 598 DFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRL 674 (711)
T ss_pred HHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccH
Confidence 9999999999999999999999999999999999999999999999999999999999988 22 23579999999999
Q ss_pred chhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHH
Q 001580 228 HFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKL 263 (1050)
Q Consensus 228 ~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l 263 (1050)
+.+..+|+|++|++|++++.|++++++++.+.|+++
T Consensus 675 ~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 675 STVERADQILVLKKGSVVEMGTHKQLMEDQGCYKHL 710 (711)
T ss_pred HHHHhCCEEEEEECCEEEEeeCHHHHHhCCCchHhc
Confidence 999999999999999999999999998877777654
No 85
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.7e-46 Score=466.36 Aligned_cols=259 Identities=29% Similarity=0.450 Sum_probs=227.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCCC------CCC--CCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEE
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPN------PPL--TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLV 73 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~------~~~--~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~ 73 (1050)
+.++.++.+++++++|+.++++.++...... +.. .+....|+++|++|+|+.. ++++|+|+||+|++||++
T Consensus 430 ~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~v 508 (710)
T TIGR03796 430 VGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRV 508 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEE
Confidence 4567888999999999999998764322111 011 1112359999999999843 468999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCC-CCCHHHHHHH
Q 001580 74 AIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGS-AFEPARYEKA 140 (1050)
Q Consensus 74 ~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~-~~~~~~~~~~ 140 (1050)
+|||+||||||||+++|+|+++|++|.+.. +++.||||||+|++|++||+|||.++. ..+++++.++
T Consensus 509 aIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~a 588 (710)
T TIGR03796 509 ALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRA 588 (710)
T ss_pred EEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHH
Confidence 999999999999999999999999887643 355799999999999999999999875 4667888999
Q ss_pred HHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEE
Q 001580 141 IDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTR 220 (1050)
Q Consensus 141 ~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ 220 (1050)
++.+++.++++.+|.|++|.+|++|.+||||||||++|||||+++|+|||||||||+||+++++.+++.+.+ .++|+
T Consensus 589 l~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~ 665 (710)
T TIGR03796 589 CKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTC 665 (710)
T ss_pred HHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999998865 47999
Q ss_pred EEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHH
Q 001580 221 VLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLM 264 (1050)
Q Consensus 221 ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~ 264 (1050)
|+|||+++.+..||+|++|++|++++.|+++++.+..+.|+.++
T Consensus 666 IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 666 IIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELWAVGGAYARLI 709 (710)
T ss_pred EEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHHHcCCcHHHHh
Confidence 99999999999999999999999999999999988877777654
No 86
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=5.6e-46 Score=453.15 Aligned_cols=262 Identities=32% Similarity=0.529 Sum_probs=232.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCc
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 82 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsG 82 (1050)
.++..+..+.+|.+|+.++++.++....+..+.......|+++|++|+|+. ++++|+|+||++++||++|||||||||
T Consensus 290 ~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsG 367 (567)
T COG1132 290 EVVSLLQRASAAAERLFELLDEEPEVEDPPDPLKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSG 367 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCC
Confidence 456778889999999999999865322211111222234999999999974 468999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcHHH
Q 001580 83 KTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHD 149 (1050)
Q Consensus 83 KSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~~~ 149 (1050)
|||++++|.|+++|++|.+.. ++..|+||||+|++|++||+|||.+|.+ ..++++.++++.+++.+.
T Consensus 368 KSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~ 447 (567)
T COG1132 368 KSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEF 447 (567)
T ss_pred HHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHH
Confidence 999999999999998887654 2456999999999999999999999976 467889999999999999
Q ss_pred HhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcch
Q 001580 150 LDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHF 229 (1050)
Q Consensus 150 ~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~ 229 (1050)
+..+|+|++|.+|++|.+||||||||++||||++++|++|+||||||+||+++++.+.+.+.+.. +++|+|+|+|+++.
T Consensus 448 I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRlst 526 (567)
T COG1132 448 IANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLST 526 (567)
T ss_pred HHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHhH
Confidence 99999999999999999999999999999999999999999999999999999999999886443 56899999999999
Q ss_pred hhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHHh
Q 001580 230 LSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENA 267 (1050)
Q Consensus 230 l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~ 267 (1050)
+..||+|++|++|++++.|+++++.++.+.|++++..+
T Consensus 527 i~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y~~l~~~~ 564 (567)
T COG1132 527 IKNADRIIVLDNGRIVERGTHEELLAKGGLYARLYQAQ 564 (567)
T ss_pred HHhCCEEEEEECCEEEEecCHHHHHHcCCHHHHHHHHh
Confidence 99999999999999999999999999999999988654
No 87
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=6.9e-46 Score=454.49 Aligned_cols=262 Identities=27% Similarity=0.408 Sum_probs=228.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCc
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 82 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsG 82 (1050)
.++.++.+++.+++|+.++++.++.......+.++....|+++|++|+|+.. ++++|+|+||+|++|++++|+|+||||
T Consensus 303 ~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsG 381 (582)
T PRK11176 303 NVNAQFQRGMAACQTLFAILDLEQEKDEGKRVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSG 381 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcCCCCCcCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCC
Confidence 4566778899999999999987653221111111222359999999999743 468999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC--CCHHHHHHHHHHhCcHH
Q 001580 83 KTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA--FEPARYEKAIDVTSLQH 148 (1050)
Q Consensus 83 KSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~--~~~~~~~~~~~~~~l~~ 148 (1050)
||||+++|+|+++|++|.+.. +++.|+||||+|.+|++||+|||.+|.+ .+++++.++++.+++.+
T Consensus 382 KSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~ 461 (582)
T PRK11176 382 KSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMD 461 (582)
T ss_pred HHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHH
Confidence 999999999999999886643 2346999999999999999999999853 57788999999999999
Q ss_pred HHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcc
Q 001580 149 DLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLH 228 (1050)
Q Consensus 149 ~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~ 228 (1050)
.++.+|+|++|.+|++|.+||||||||++|||||+++|+|+|||||||+||++++..+++.+.+. .+++|+|+|||+++
T Consensus 462 ~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~-~~~~tvI~VtHr~~ 540 (582)
T PRK11176 462 FINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDEL-QKNRTSLVIAHRLS 540 (582)
T ss_pred HHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHH-hCCCEEEEEecchH
Confidence 99999999999999999999999999999999999999999999999999999999999987664 35799999999999
Q ss_pred hhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHH
Q 001580 229 FLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMEN 266 (1050)
Q Consensus 229 ~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~ 266 (1050)
.++.||+|++|++|++++.|+++++.+..+.|+.+...
T Consensus 541 ~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~~~y~~l~~~ 578 (582)
T PRK11176 541 TIEKADEILVVEDGEIVERGTHAELLAQNGVYAQLHKM 578 (582)
T ss_pred HHHhCCEEEEEECCEEEEeCCHHHHHhCCChHHHHHHH
Confidence 99999999999999999999999999888888887753
No 88
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-46 Score=376.83 Aligned_cols=203 Identities=32% Similarity=0.506 Sum_probs=179.6
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeCc
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 107 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~~ 107 (1050)
.|+++|++++|+ +..+|+||||+|++||+++|+|||||||||||++|.|+.+|++|.+.. .|..
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 589999999997 357999999999999999999999999999999999999999886543 2346
Q ss_pred EEEEecCCCCC-cccHHHHhccCCC----CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 108 VAYVPQVSWIF-NATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 108 i~~v~Q~~~l~-~~TV~eni~~g~~----~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
+|+|+|+..|| ..||.||+.++.. ... ++....++..+|.+..+.+| .+|||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 99999999998 6899999998731 122 23344577788888888877 4899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhc-CEEEEEcCCeEeeccChhhhhcCh
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQV-DRIILVHEGMVKEEGTFEDLSNNG 257 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~-d~i~~l~~G~i~~~g~~~~l~~~~ 257 (1050)
||||+.+|+++|+|||||+|||+.+..+.+.+..+...|.|.|+|||++.|+..+ |||+.|++|+++++|+++++..++
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 9999999999999999999999999999998888888999999999999999985 999999999999999999988664
No 89
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-45 Score=414.28 Aligned_cols=227 Identities=23% Similarity=0.359 Sum_probs=197.6
Q ss_pred CCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCC
Q 001580 659 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK 733 (1050)
Q Consensus 659 ~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~ 733 (1050)
.|+..+.|+++|++++|++..+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 74 ~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 74 DFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 477778899999999996444479999999999999999999999999999999999996 579999999999973
Q ss_pred --CChHHHhhheEEEcCCcccccccHHHhcccCC---CCCHHHH-----HHHHHHhcHHHHHHHccCCcchhhhcCCCCC
Q 001580 734 --FGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS---EHSDADL-----WEALERAHLKDAIRRNSLGLDAQVSEAGENF 803 (1050)
Q Consensus 734 --~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~~~~~~-----~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~L 803 (1050)
.+...+|+.++||||+|.+|++|+++|+.+.. ..++.+. .++++.+++ +.++++.+++.+.+|
T Consensus 154 ~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L-------~~~l~~~~~~~~~~L 226 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAAL-------WDEVKDDLDKAGNAL 226 (329)
T ss_pred cccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCC-------cchhhhhhhCCcccC
Confidence 44567889999999999999999999998532 1233332 333444443 335667889999999
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 804 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 804 SgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
||||||||+||||++++|+||||||||++||+.+...++++|+++.+++|+|+|||+++++.. ||||++|++|+|++.|
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g 306 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAG 306 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999998888999999999999988 9999999999999999
Q ss_pred ChhHHhhcCC
Q 001580 883 TPEELLSNEG 892 (1050)
Q Consensus 883 ~~~el~~~~~ 892 (1050)
+++++...+.
T Consensus 307 ~~~~l~~~~~ 316 (329)
T PRK14257 307 ETKTIFIHPK 316 (329)
T ss_pred CHHHHhcCCC
Confidence 9999986543
No 90
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.1e-45 Score=461.68 Aligned_cols=260 Identities=27% Similarity=0.481 Sum_probs=227.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCCC--CCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPN--PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGT 79 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~--~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~n 79 (1050)
..+++++.+++++++|+.++++.++....+. .+..+....|+++|++|+|+. ++++|+|+||+|++|+++||+|+|
T Consensus 432 ~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~S 509 (708)
T TIGR01193 432 INLQPKLQAARVANNRLNEVYLVDSEFINKKKRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMS 509 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCC
Confidence 3567788899999999999998764322111 111122235999999999973 468999999999999999999999
Q ss_pred CCcHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCC--CCCHHHHHHHHHHhC
Q 001580 80 GEGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGS--AFEPARYEKAIDVTS 145 (1050)
Q Consensus 80 GsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~--~~~~~~~~~~~~~~~ 145 (1050)
|||||||+++|+|+++|++|.+.. +++.||||||+|++|++||+|||.+|. ..+++++.++++.++
T Consensus 510 GsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~ 589 (708)
T TIGR01193 510 GSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAE 589 (708)
T ss_pred CCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhC
Confidence 999999999999999999887643 245699999999999999999999983 356778889999999
Q ss_pred cHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEecc
Q 001580 146 LQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTN 225 (1050)
Q Consensus 146 l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH 225 (1050)
+.+.+..+|.|++|.+|++|.+||||||||++|||||+++|++||||||||+||+++++.+.+.+.+. +++|+|+|||
T Consensus 590 l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitH 667 (708)
T TIGR01193 590 IKDDIENMPLGYQTELSEEGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAH 667 (708)
T ss_pred CHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999988753 5799999999
Q ss_pred CcchhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHH
Q 001580 226 QLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLME 265 (1050)
Q Consensus 226 ~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 265 (1050)
+++.+..||+|++|++|++++.|+++++++..+.|+.++.
T Consensus 668 r~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~~~~y~~l~~ 707 (708)
T TIGR01193 668 RLSVAKQSDKIIVLDHGKIIEQGSHDELLDRNGFYASLIH 707 (708)
T ss_pred chHHHHcCCEEEEEECCEEEEECCHHHHHhcCCcHHHHhh
Confidence 9999999999999999999999999999888778877653
No 91
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-45 Score=377.34 Aligned_cols=216 Identities=30% Similarity=0.511 Sum_probs=187.9
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---Hhh
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LRK 741 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~r~ 741 (1050)
.|++++|+++|+++ .+++||||+|++||++||+||||||||||+|+|.|+++|++|+|.++|.++.+++..+ +|+
T Consensus 8 ~I~vr~v~~~fG~~--~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 8 LIEVRGVTKSFGDR--VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRK 85 (263)
T ss_pred eEEEeeeeeecCCE--EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHh
Confidence 59999999999764 7999999999999999999999999999999999999999999999999999888654 689
Q ss_pred heEEEcCCcccccc-cHHHhcccC----CCCCHHHHHH----HHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 001580 742 ILGIIPQSPVLFSG-TVRFNLDPF----SEHSDADLWE----ALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 742 ~i~~v~Q~~~lf~~-tv~~nl~~~----~~~~~~~~~~----~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~ 812 (1050)
++|+++|+..||+. ||+||+.+. ....+..+.+ .++.+|+.... ....+..||||+++|++
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~----------~~~~PsELSGGM~KRva 155 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAA----------ADLYPSELSGGMRKRVA 155 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhh----------hhhCchhhcchHHHHHH
Confidence 99999999999977 999999752 2233333332 34444444431 23344789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
||||+.-+|+||++||||+||||.+...+.+.|+++.+ +.|+++||||++++.. ||||+++.+|+|+..|+++|+.+
T Consensus 156 LARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 156 LARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred HHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999998764 7899999999999877 99999999999999999999998
Q ss_pred cCC
Q 001580 890 NEG 892 (1050)
Q Consensus 890 ~~~ 892 (1050)
..+
T Consensus 236 sd~ 238 (263)
T COG1127 236 SDD 238 (263)
T ss_pred CCC
Confidence 654
No 92
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.1e-45 Score=450.56 Aligned_cols=261 Identities=25% Similarity=0.356 Sum_probs=229.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCc
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 82 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsG 82 (1050)
..+..+.++.+|++||.++++.++..... .........|+++|++|+|+. ++++|+|+||++++||+++|+|+||||
T Consensus 303 ~~~~~~~~~~~s~~ri~~~l~~~~~~~~~-~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsG 379 (592)
T PRK10790 303 TQQSMLQQAVVAGERVFELMDGPRQQYGN-DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSG 379 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCCC-CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCC
Confidence 45667889999999999999876432111 111112235999999999973 357999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHHH
Q 001580 83 KTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDL 150 (1050)
Q Consensus 83 KSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~ 150 (1050)
||||+++|+|+++|++|.+.. +++.|+||||+|.+|++||+|||.++...+++++.++++.+++.+.+
T Consensus 380 KSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i 459 (592)
T PRK10790 380 KSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELA 459 (592)
T ss_pred HHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHH
Confidence 999999999999999876532 23569999999999999999999999877788899999999999999
Q ss_pred hcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchh
Q 001580 151 DLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFL 230 (1050)
Q Consensus 151 ~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l 230 (1050)
+.+|+|++|.+|++|.+||||||||++|||||+++|+|+|||||||+||+++++.+.+.+.+.. +++|+|+|||+++.+
T Consensus 460 ~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~-~~~tvIivtHr~~~l 538 (592)
T PRK10790 460 RSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR-EHTTLVVIAHRLSTI 538 (592)
T ss_pred HhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-CCCEEEEEecchHHH
Confidence 9999999999999999999999999999999999999999999999999999999999876543 469999999999999
Q ss_pred hhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHHh
Q 001580 231 SQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENA 267 (1050)
Q Consensus 231 ~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~ 267 (1050)
..+|+|++|++|++++.|+++++.+..+.|+.+...+
T Consensus 539 ~~~D~ii~l~~G~i~~~G~~~~L~~~~~~y~~l~~~~ 575 (592)
T PRK10790 539 VEADTILVLHRGQAVEQGTHQQLLAAQGRYWQMYQLQ 575 (592)
T ss_pred HhCCEEEEEECCEEEEEcCHHHHHhCCCHHHHHHHHH
Confidence 9999999999999999999999998888898887643
No 93
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-45 Score=412.35 Aligned_cols=222 Identities=34% Similarity=0.575 Sum_probs=205.8
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i 108 (1050)
.|+|+|++|+|+ +++++|+++||+|++||.+||||+|||||||++|+|.++++ ++|.+.+ .|+.|
T Consensus 351 ~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~I 427 (591)
T KOG0057|consen 351 SIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSI 427 (591)
T ss_pred cEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhhe
Confidence 499999999997 35679999999999999999999999999999999999998 7776543 35569
Q ss_pred EEEecCCCCCcccHHHHhccCCCC-CHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 001580 109 AYVPQVSWIFNATVRDNILFGSAF-EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 187 (1050)
Q Consensus 109 ~~v~Q~~~l~~~TV~eni~~g~~~-~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~ 187 (1050)
|||||+..||+.||.+||.+|++. ..+++.++++.+++++.+..+|+||.|.+|++|..|||||||||+||||++.+|+
T Consensus 428 g~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~ 507 (591)
T KOG0057|consen 428 GVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAP 507 (591)
T ss_pred eEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCC
Confidence 999999999999999999999754 4577888999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHH
Q 001580 188 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMEN 266 (1050)
Q Consensus 188 vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~ 266 (1050)
|++||||||+||.++++.+.+.+.+ ...|+|+|+|-||++.++.+|+|+++++|++.+.|+++|++...+.|+.++..
T Consensus 508 Il~~DEaTS~LD~~TE~~i~~~i~~-~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~~ 585 (591)
T KOG0057|consen 508 ILLLDEATSALDSETEREILDMIMD-VMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWTT 585 (591)
T ss_pred eEEecCcccccchhhHHHHHHHHHH-hcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhcc
Confidence 9999999999999999999998876 55789999999999999999999999999999999999999988888888754
No 94
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-46 Score=371.22 Aligned_cols=219 Identities=26% Similarity=0.449 Sum_probs=197.1
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCc-----cEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER-----GRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~-----G~i~~~g~~i~~--~~~~ 737 (1050)
.++++|+++.|+.. .+|+|||++|++++++|++|||||||||+|+++.++.+... |+|.++|++|.+ ++..
T Consensus 7 ~~~~~~l~~yYg~~--~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~ 84 (253)
T COG1117 7 AIEVRDLNLYYGDK--HALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVV 84 (253)
T ss_pred eeEecceeEEECch--hhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHH
Confidence 48999999999754 79999999999999999999999999999999999998876 999999999976 4688
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC-------CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~-------~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
.+|++||+|+|.|.-|..||.||+.++.+ .-++.++++|+.+.+++.+.. .+.+.+..|||||+||
T Consensus 85 ~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQR 157 (253)
T COG1117 85 ELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQR 157 (253)
T ss_pred HHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHHH
Confidence 99999999999999999999999986532 124557888999999887653 2345567799999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||||.-+|+|||||||||+|||.+...|++.|.++.+.-|||+|||.|.-+.+ +|++..|..|+++|.|..+++..
T Consensus 158 LcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~ 237 (253)
T COG1117 158 LCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFT 237 (253)
T ss_pred HHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhc
Confidence 99999999999999999999999999999999999999889999999999999877 99999999999999999999987
Q ss_pred cCC
Q 001580 890 NEG 892 (1050)
Q Consensus 890 ~~~ 892 (1050)
++.
T Consensus 238 ~P~ 240 (253)
T COG1117 238 NPK 240 (253)
T ss_pred Ccc
Confidence 653
No 95
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.4e-45 Score=444.58 Aligned_cols=260 Identities=25% Similarity=0.433 Sum_probs=227.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCC-CCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCC
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLP-NPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGE 81 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~-~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGs 81 (1050)
..+.++.++++|++||.++++.++....+ .+...+....|+++|++|+|+.. ++++|+|+||++++|++++|+|+|||
T Consensus 299 ~~~~~~~~~~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGs 377 (574)
T PRK11160 299 GAFQHLGQVIASARRINEITEQKPEVTFPTTSTAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGC 377 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCC
Confidence 35677788999999999999876432211 11111222459999999999742 35799999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcHH
Q 001580 82 GKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQH 148 (1050)
Q Consensus 82 GKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~~ 148 (1050)
|||||+++|+|+++|++|.+.. +++.|+||||+|++|++||+|||.++.+ .+++++.++++.+++.+
T Consensus 378 GKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~ 457 (574)
T PRK11160 378 GKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEK 457 (574)
T ss_pred CHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHH
Confidence 9999999999999999887543 2346999999999999999999999864 46678889999999999
Q ss_pred HHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcc
Q 001580 149 DLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLH 228 (1050)
Q Consensus 149 ~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~ 228 (1050)
.++. |+|++|.+|++|.+||||||||++|||||+++|++||||||||+||+++++.+.+.+.+. .+++|+|+|||+++
T Consensus 458 ~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~-~~~~tviiitHr~~ 535 (574)
T PRK11160 458 LLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEH-AQNKTVLMITHRLT 535 (574)
T ss_pred HHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-cCCCEEEEEecChh
Confidence 9999 999999999999999999999999999999999999999999999999999999987655 35899999999999
Q ss_pred hhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHH
Q 001580 229 FLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLME 265 (1050)
Q Consensus 229 ~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 265 (1050)
.+..+|+|++|++|++++.|+++++++..+.|+.++.
T Consensus 536 ~~~~~d~i~~l~~G~i~~~g~~~~l~~~~g~y~~l~~ 572 (574)
T PRK11160 536 GLEQFDRICVMDNGQIIEQGTHQELLAQQGRYYQLKQ 572 (574)
T ss_pred HHHhCCEEEEEeCCeEEEeCCHHHHHhcCcHHHHHHh
Confidence 9999999999999999999999999999889988764
No 96
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.9e-45 Score=390.08 Aligned_cols=212 Identities=34% Similarity=0.527 Sum_probs=187.8
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++|+|++. ++|+|+||+|++||+++|+||||||||||+|+|+|+++|.+|+|.+||+++.+++.+++.+++||
T Consensus 3 L~~~~ls~~y~~~--~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~ 80 (258)
T COG1120 3 LEVENLSFGYGGK--PILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAY 80 (258)
T ss_pred eEEEEEEEEECCe--eEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEE
Confidence 7899999999743 79999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCcc-cccccHHHhcccC--------CCCC--H-HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 001580 746 IPQSPV-LFSGTVRFNLDPF--------SEHS--D-ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 746 v~Q~~~-lf~~tv~~nl~~~--------~~~~--~-~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~l 813 (1050)
|||.+. -|.-||+|-+.++ ...+ | +.+.++++..++.++.++ ....||||||||+.|
T Consensus 81 vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-----------~~~~LSGGerQrv~i 149 (258)
T COG1120 81 VPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-----------PVDELSGGERQRVLI 149 (258)
T ss_pred eccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-----------cccccChhHHHHHHH
Confidence 999975 4555998865432 1112 2 246777888877776655 235799999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
||||+++|+||||||||++||....-.+++.++++. +|.|+|+|.||++.+.+ ||++++|++|++++.|+|+|++..
T Consensus 150 ArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~ 229 (258)
T COG1120 150 ARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTE 229 (258)
T ss_pred HHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCH
Confidence 999999999999999999999999999999999976 37999999999999766 999999999999999999998753
No 97
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.3e-45 Score=453.82 Aligned_cols=253 Identities=31% Similarity=0.482 Sum_probs=222.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCCCC--CCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPNP--PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGT 79 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~--~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~n 79 (1050)
+..+.++.+++++++|+.++++.++....... +..+....|+++|++|+|+. .++++|+|+||+|++||+++|+|+|
T Consensus 422 ~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~I~~~~vsf~Y~~-~~~~vL~~i~l~i~~G~~iaIvG~s 500 (694)
T TIGR03375 422 AGLLTRYQQAKTALQSLDELMQLPVERPEGTRFLHRPRLQGEIEFRNVSFAYPG-QETPALDNVSLTIRPGEKVAIIGRI 500 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCccceEEEEEEEEEeCC-CCccceeeeeEEECCCCEEEEECCC
Confidence 35677889999999999999988653221111 11112235999999999974 3467999999999999999999999
Q ss_pred CCcHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCc
Q 001580 80 GEGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSL 146 (1050)
Q Consensus 80 GsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l 146 (1050)
|||||||+++|+|+++|++|.+.. ++..|+||||+|++|++||+|||.++.+ .+++++.++++.+++
T Consensus 501 GsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l 580 (694)
T TIGR03375 501 GSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGV 580 (694)
T ss_pred CCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcCh
Confidence 999999999999999999886543 2456999999999999999999999975 678889999999999
Q ss_pred HHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccC
Q 001580 147 QHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQ 226 (1050)
Q Consensus 147 ~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~ 226 (1050)
.+.++.+|.|++|.+|++|.+||||||||++|||||+++|++||||||||+||+++++.+.+.+.+. .+++|+|+|||+
T Consensus 581 ~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~-~~~~T~iiItHr 659 (694)
T TIGR03375 581 TEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRW-LAGKTLVLVTHR 659 (694)
T ss_pred HHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHH-hCCCEEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999999987654 357999999999
Q ss_pred cchhhhcCEEEEEcCCeEeeccChhhhhcC
Q 001580 227 LHFLSQVDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 227 ~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
++.+..||+|++|++|++++.|+++++.+.
T Consensus 660 l~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 660 TSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 999999999999999999999999988643
No 98
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.4e-44 Score=394.75 Aligned_cols=237 Identities=50% Similarity=0.827 Sum_probs=215.3
Q ss_pred CccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhh
Q 001580 663 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKI 742 (1050)
Q Consensus 663 ~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~ 742 (1050)
.+.|+++|++++|+.....+++|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.++|.++.+.+...+++.
T Consensus 17 ~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~ 96 (257)
T cd03288 17 GGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSR 96 (257)
T ss_pred CceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhhh
Confidence 45699999999997533469999999999999999999999999999999999999999999999999988888888999
Q ss_pred eEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 743 LGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 743 i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
++|+||++.+|..|+++|+.+........+.++++..++.+++..+|.|+++.+++.+.+||||||||++|||||+++|+
T Consensus 97 i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~ 176 (257)
T cd03288 97 LSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSS 176 (257)
T ss_pred EEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999997653334556778888889999999999999999999999999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHHHH
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMV 899 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~ 899 (1050)
+|||||||++||+.++..+.+.|++..+++|+|++||+++.+..||||++|++|++++.|+++++.+..++.|...+
T Consensus 177 llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 177 ILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 99999999999999999999999987678999999999999988999999999999999999999876555555443
No 99
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.9e-44 Score=391.22 Aligned_cols=231 Identities=37% Similarity=0.603 Sum_probs=208.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|+....++++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 46899999996433469999999999999999999999999999999999999999999999999987777778889999
Q ss_pred EcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 001580 746 IPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 824 (1050)
Q Consensus 746 v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~il 824 (1050)
+||++.+|..|+.+|+.+... .....+.+.++..++.+++..+|.|+++..+..+.+|||||||||+||||++.+|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 999999998899999976433 2345566677778889999999999999999999999999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCChHHH
Q 001580 825 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSK 897 (1050)
Q Consensus 825 lLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 897 (1050)
||||||++||+.++..+.+.|+++.+++|+|++||+++++..||++++|++|++++.|++++++.+. +.|..
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~-~~~~~ 232 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAEN-GLYAY 232 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhcc-ChHHH
Confidence 9999999999999999999999987789999999999999779999999999999999999998763 34443
No 100
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-45 Score=411.40 Aligned_cols=256 Identities=29% Similarity=0.510 Sum_probs=224.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCC-CCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHH
Q 001580 6 WQVVNANVSLKRMEEFLLAEEKILLPNP-PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKT 84 (1050)
Q Consensus 6 ~~~~~a~~s~~Ri~~fl~~~e~~~~~~~-~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKS 84 (1050)
....+.-.|.+|+.+.+.+++....+++ ...+++ .++++|++|+|+.+ ..++|+|+||++++||++||+|++|||||
T Consensus 301 ~~lgq~~~Sa~Rl~~i~~q~~e~~~~~~~~~~~~~-~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKS 378 (573)
T COG4987 301 QHLGQVIASARRLNDILDQKPEVTFPDEQTATTGQ-ALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKS 378 (573)
T ss_pred HHhhHHHHHHHHHhhhccCCcccCCCccccCCccc-eeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHH
Confidence 4455667788899988888765544422 222333 79999999999853 45899999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCCC-CHHHHHHHHHHhCcHHHHh
Q 001580 85 SLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSAF-EPARYEKAIDVTSLQHDLD 151 (1050)
Q Consensus 85 TLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~~-~~~~~~~~~~~~~l~~~~~ 151 (1050)
||+++|+|.++|++|.+.. ++..+++++|.+.+|++|+++|+.++++. .++++.++++..+|.+.+.
T Consensus 379 TllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 379 TLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHH
Confidence 9999999999999887543 23369999999999999999999998754 4577888999999999999
Q ss_pred cCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhh
Q 001580 152 LLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS 231 (1050)
Q Consensus 152 ~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~ 231 (1050)
..|+|.+|.+||+|..||||||||++|||+|++|.+++||||||.||||.+++.+.+.+... .+|||+|+|||++..++
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~-~~~kTll~vTHrL~~le 537 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEH-AEGKTLLMVTHRLRGLE 537 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHH-hcCCeEEEEecccccHh
Confidence 99999999999999999999999999999999999999999999999999999999977653 35899999999999999
Q ss_pred hcCEEEEEcCCeEeeccChhhhhcChHHHHHHH
Q 001580 232 QVDRIILVHEGMVKEEGTFEDLSNNGELFQKLM 264 (1050)
Q Consensus 232 ~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~ 264 (1050)
.+|||++|++|+++++|++++++.+.+.|.++.
T Consensus 538 ~~drIivl~~Gkiie~G~~~~Ll~~~g~~~~l~ 570 (573)
T COG4987 538 RMDRIIVLDNGKIIEEGTHAELLANNGRYKRLY 570 (573)
T ss_pred hcCEEEEEECCeeeecCCHHhhhccccHHHHHh
Confidence 999999999999999999999999888887664
No 101
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.9e-45 Score=391.01 Aligned_cols=199 Identities=21% Similarity=0.324 Sum_probs=153.4
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.+-+.||+|.|++. .+.+++++|-|.--.+++||||||.|||||+++|.|-++|+.|+.+-+ .|-+||
T Consensus 586 vLGlH~VtFgy~gq-kpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQ-KPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCCC-CchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 47889999999765 479999999999999999999999999999999999999999987654 345799
Q ss_pred EEcCCcc-ccc--ccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhh-cCCCCCChhHHHHHHHHHHHccC
Q 001580 745 IIPQSPV-LFS--GTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVS-EAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 745 ~v~Q~~~-lf~--~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~-~~~~~LSgGq~qrl~lArall~~ 820 (1050)
+.-|+.. -++ .|-.+.|.-.-....++.+..|...|+.. +.. -....||||||.||+||-.-++.
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fGL~s-----------HAHTikikdLSGGQKaRValaeLal~~ 722 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFGLAS-----------HAHTIKIKDLSGGQKARVALAELALGG 722 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhhhhh-----------ccceEeeeecCCcchHHHHHHHHhcCC
Confidence 9888863 222 36666664221223344555555544432 221 12357999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcC-EEEEEeCCEEEEe-cChhHHh
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCD-RILLLDSGRVLEY-DTPEELL 888 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d-~i~vl~~G~i~~~-g~~~el~ 888 (1050)
|+||||||||++||.++...+-++|++ ....||+||||-..+...| ..||+++-.|-+. |..+++.
T Consensus 723 PDvlILDEPTNNLDIESIDALaEAIne--y~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFeDYk 790 (807)
T KOG0066|consen 723 PDVLILDEPTNNLDIESIDALAEAINE--YNGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFEDYK 790 (807)
T ss_pred CCEEEecCCCCCcchhhHHHHHHHHHh--ccCcEEEEecccceeeecCceEEEEccCChhhccccHHHHH
Confidence 999999999999999999999999998 4667999999998887632 4666666445433 5555543
No 102
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.3e-44 Score=442.58 Aligned_cols=262 Identities=30% Similarity=0.443 Sum_probs=229.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGE 81 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGs 81 (1050)
...+.++.+++++++|+.++++.++.......+..+....|+++|++|+|++. ++++|+|+||++++|++++|+|+|||
T Consensus 291 ~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGs 369 (571)
T TIGR02203 291 TNVNAPMQRGLAAAESLFTLLDSPPEKDTGTRAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGS 369 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCC
Confidence 34678889999999999999987654321111112222359999999999753 46899999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCC--CCCHHHHHHHHHHhCcH
Q 001580 82 GKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGS--AFEPARYEKAIDVTSLQ 147 (1050)
Q Consensus 82 GKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~--~~~~~~~~~~~~~~~l~ 147 (1050)
|||||+++|+|+++|++|.+.. .+..|+||||+|++|++|++|||.++. ..+++++.++++.+++.
T Consensus 370 GKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~ 449 (571)
T TIGR02203 370 GKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQ 449 (571)
T ss_pred CHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChH
Confidence 9999999999999999887643 234599999999999999999999985 46778899999999999
Q ss_pred HHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCc
Q 001580 148 HDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQL 227 (1050)
Q Consensus 148 ~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~ 227 (1050)
+.+..+|.|.+|.+|++|.+||||||||++||||++++|+|++||||||+||+++++.+++.+.+. .+++|+|+|||+.
T Consensus 450 ~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~-~~~~tiIiitH~~ 528 (571)
T TIGR02203 450 DFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERL-MQGRTTLVIAHRL 528 (571)
T ss_pred HHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHH-hCCCEEEEEehhh
Confidence 999999999999999999999999999999999999999999999999999999999999988654 3579999999999
Q ss_pred chhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHH
Q 001580 228 HFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLME 265 (1050)
Q Consensus 228 ~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 265 (1050)
+.+..||+|++|++|++++.|+++++.+..+.|+.+..
T Consensus 529 ~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~~~~~~~~ 566 (571)
T TIGR02203 529 STIEKADRIVVMDDGRIVERGTHNELLARNGLYAQLHN 566 (571)
T ss_pred HHHHhCCEEEEEeCCEEEeeCCHHHHHHcCCHHHHHHH
Confidence 99999999999999999999999999877777777654
No 103
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.7e-44 Score=384.83 Aligned_cols=219 Identities=68% Similarity=1.064 Sum_probs=204.6
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|+...+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (221)
T cd03244 2 DIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRIS 81 (221)
T ss_pred cEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEE
Confidence 48999999999743346999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 001580 745 IIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 824 (1050)
Q Consensus 745 ~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~il 824 (1050)
|+||++.+|..|+++|+.++.....+++.++++..++.+++.++|.|+++..++.+.+||||||||++|||||+.+|++|
T Consensus 82 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~ll 161 (221)
T cd03244 82 IIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKIL 161 (221)
T ss_pred EECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999989999999876555667788889999999999999999999999999999999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecC
Q 001580 825 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 883 (1050)
Q Consensus 825 lLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~ 883 (1050)
||||||++||+.+++.+.+.|+++.++.|+|++||+++.+..||++++|++|++++.|+
T Consensus 162 llDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 162 VLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999998877899999999999998899999999999998876
No 104
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.8e-43 Score=428.93 Aligned_cols=210 Identities=27% Similarity=0.371 Sum_probs=168.6
Q ss_pred EEEEEEEEe--CCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC--CccEEEECCeecCCCChHHHhhh
Q 001580 667 KFEDVVLRY--RPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL--ERGRILIDGFDIAKFGLMDLRKI 742 (1050)
Q Consensus 667 ~~~~v~~~y--~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p--~~G~i~~~g~~i~~~~~~~~r~~ 742 (1050)
...|+.+.- .++.+..|+||+=-++||..+||+|+|||||||||++|+|-..- .+|+|+++|.+..+ ...++.
T Consensus 789 ~w~dl~~~~~~qG~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~ 865 (1391)
T KOG0065|consen 789 YWVDLPYEMPIQGGTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARV 865 (1391)
T ss_pred EEEeCCccccccccceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccc
Confidence 344444433 23445799999999999999999999999999999999986432 37999999998754 578999
Q ss_pred eEEEcCCcccc-cccHHHhcccC------CCCCHHH----HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 001580 743 LGIIPQSPVLF-SGTVRFNLDPF------SEHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 811 (1050)
Q Consensus 743 i~~v~Q~~~lf-~~tv~~nl~~~------~~~~~~~----~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl 811 (1050)
+|||.|++.-. .-||||-|.+. .+.++++ ++++++..++.++ -|..||..|..||..||+||
T Consensus 866 ~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~-------~daiVG~~G~GLs~eQRKrL 938 (1391)
T KOG0065|consen 866 SGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY-------ADALVGLPGSGLSTEQRKRL 938 (1391)
T ss_pred cceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh-------hhhhccCCCCCCCHHHhcee
Confidence 99999999654 44999988642 1222222 4444444444433 24568888899999999999
Q ss_pred HHHHHHccCC-CEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchh--hhhcCEEEEEe-CCEEEEecChhH
Q 001580 812 SLSRALLRRS-KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT--IIDCDRILLLD-SGRVLEYDTPEE 886 (1050)
Q Consensus 812 ~lArall~~p-~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~--~~~~d~i~vl~-~G~i~~~g~~~e 886 (1050)
.||--|+.+| .||+|||||||||+.+...|.+.++++. .|+||+.+-|.++. .+..|+++.|+ .|+.+..|+..+
T Consensus 939 TIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 939 TIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred eEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 9999999999 8899999999999999999999999976 58999999999976 46699999998 699999988654
No 105
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-44 Score=396.38 Aligned_cols=217 Identities=26% Similarity=0.424 Sum_probs=194.9
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.|+++||+++|++. .+++|+||+|+.||.++|+||||||||||||+|+|+.+|++|+|.++|.++++++|. ++.||
T Consensus 3 ~i~l~~v~K~yg~~--~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~--~R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSF--EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPE--KRGIA 78 (338)
T ss_pred EEEEeeeEEEcCCc--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--HCCEE
Confidence 38999999999753 299999999999999999999999999999999999999999999999999999985 47899
Q ss_pred EEcCCcccccc-cHHHhcccCCC-------CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~-------~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
+|+|+..||.. ||++||.|.-+ ..+.++.++++..++.+++++.| .+||||||||||||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHHH
Confidence 99999999976 99999986532 23566788888888888887776 5799999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 893 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 893 (1050)
|+++|+++|||||+|+||+..+..+...|+++.+ +.|+|+||||..++.. +|||+||++|+|.+.|+|.|+..++..
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 9999999999999999999999999999888543 6899999999999877 999999999999999999999987765
Q ss_pred hHH
Q 001580 894 SFS 896 (1050)
Q Consensus 894 ~~~ 896 (1050)
.|.
T Consensus 228 ~fV 230 (338)
T COG3839 228 LFV 230 (338)
T ss_pred hhh
Confidence 443
No 106
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-43 Score=383.19 Aligned_cols=225 Identities=43% Similarity=0.700 Sum_probs=206.6
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|+.. +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 2 ~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (229)
T cd03254 2 EIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIG 80 (229)
T ss_pred eEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEE
Confidence 48999999999632 36999999999999999999999999999999999999999999999999998877777888999
Q ss_pred EEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 001580 745 IIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 823 (1050)
Q Consensus 745 ~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~i 823 (1050)
|+||++.+|..|+++|+.++.. ....++.++++..++.++++.+|.|+++.++....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~l 160 (229)
T cd03254 81 VVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKI 160 (229)
T ss_pred EecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999998899999986543 345667778888899999999999999999999999999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 824 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 824 llLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|||||||++||+.+++.+.+.|+++.+++|+|+|||+++.+..||++++|++|++++.|+++++.++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 161 LILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 9999999999999999999999988678999999999999877999999999999999999888754
No 107
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=9.1e-44 Score=435.56 Aligned_cols=262 Identities=29% Similarity=0.427 Sum_probs=225.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccC-CCC-CCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCC
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILL-PNP-PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTG 80 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~-~~~-~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nG 80 (1050)
..+..+..++.+++|+.+++..++.... +.. +..+....|+++|++|+|+. ++++|+|+||++++|++++|+|+||
T Consensus 294 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sG 371 (588)
T PRK13657 294 AFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAIDLGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTG 371 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCcCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCC
Confidence 3466677888999999999876432111 111 11111235999999999973 3579999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcH
Q 001580 81 EGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQ 147 (1050)
Q Consensus 81 sGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~ 147 (1050)
||||||+++|+|+++|++|.+.. ++..|+||||+|.+|++|++|||.++.+ .++++...+++.+++.
T Consensus 372 sGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~ 451 (588)
T PRK13657 372 AGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAH 451 (588)
T ss_pred CCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHH
Confidence 99999999999999999876543 2346999999999999999999999853 4567788899999999
Q ss_pred HHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCc
Q 001580 148 HDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQL 227 (1050)
Q Consensus 148 ~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~ 227 (1050)
+.++.+|+|.+|.+|++|.+||||||||++|||||+++|+|+|||||||+||+++++.+++.+.+. .+++|+|+||||.
T Consensus 452 ~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~-~~~~tvIiitHr~ 530 (588)
T PRK13657 452 DFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDEL-MKGRTTFIIAHRL 530 (588)
T ss_pred HHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHH-hcCCEEEEEEecH
Confidence 999999999999999999999999999999999999999999999999999999999999987654 3579999999999
Q ss_pred chhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHHh
Q 001580 228 HFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENA 267 (1050)
Q Consensus 228 ~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~ 267 (1050)
+.+..+|+|++|++|++++.|+++++....+.|..+...+
T Consensus 531 ~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 570 (588)
T PRK13657 531 STVRNADRILVFDNGRVVESGSFDELVARGGRFAALLRAQ 570 (588)
T ss_pred HHHHhCCEEEEEECCEEEEeCCHHHHHHCCChHHHHHHHh
Confidence 9999999999999999999999999988878888877643
No 108
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=7.1e-44 Score=436.43 Aligned_cols=263 Identities=30% Similarity=0.468 Sum_probs=227.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhccc-CCCC--CCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKIL-LPNP--PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGG 78 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~-~~~~--~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~ 78 (1050)
+..+..+.+++++++|+.++++.++... ...+ ...+....|+++|++|+|+.+.++++|+|+||++++||+++|+|+
T Consensus 295 ~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~ 374 (576)
T TIGR02204 295 SEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGP 374 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECC
Confidence 4567888999999999999998754321 1111 111112359999999999854346899999999999999999999
Q ss_pred CCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhC
Q 001580 79 TGEGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTS 145 (1050)
Q Consensus 79 nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~ 145 (1050)
||||||||+++|+|+++|.+|.+.. +++.++||||+|++|++||+|||.++.+ .+.++...+++.++
T Consensus 375 sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~ 454 (576)
T TIGR02204 375 SGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAH 454 (576)
T ss_pred CCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcC
Confidence 9999999999999999999876542 2346999999999999999999999864 45678888999999
Q ss_pred cHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEecc
Q 001580 146 LQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTN 225 (1050)
Q Consensus 146 l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH 225 (1050)
+.+.++.+|.|.+|.+|++|.+||||||||++||||++++|++||||||||+||+.+++.+++.+.+. .+++|+|+|||
T Consensus 455 l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~-~~~~t~IiitH 533 (576)
T TIGR02204 455 AHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETL-MKGRTTLIIAH 533 (576)
T ss_pred cHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHH-hCCCEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999887665 35899999999
Q ss_pred CcchhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHH
Q 001580 226 QLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLME 265 (1050)
Q Consensus 226 ~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 265 (1050)
+.+.++.+|+|+++++|++++.|+++++.+..+.|+.+..
T Consensus 534 ~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~~~~~~~l~~ 573 (576)
T TIGR02204 534 RLATVLKADRIVVMDQGRIVAQGTHAELIAKGGLYARLAR 573 (576)
T ss_pred chHHHHhCCEEEEEECCEEEeeecHHHHHHcCChHHHHHh
Confidence 9999999999999999999999999999888777877664
No 109
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-44 Score=378.02 Aligned_cols=209 Identities=29% Similarity=0.446 Sum_probs=181.7
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.|+++|++++|+.. ++|+||||+|++|++++|+||||||||||+|+|+|+++|++|+|.+.|.++.+... +.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 38999999999754 59999999999999999999999999999999999999999999999988765432 46899
Q ss_pred EEcCCc---ccccccHHHhcccCC-----------CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 745 IIPQSP---VLFSGTVRFNLDPFS-----------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 745 ~v~Q~~---~lf~~tv~~nl~~~~-----------~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
||||.. +-|..||+|-+..+. ....+.+.++|+++++.++..+ ....|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-----------~i~~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-----------QIGELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-----------cccccCcHHHHH
Confidence 999976 346779999765431 1124678889999888876554 235799999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
+.|||||+++|++|||||||+|+|+.++..+++.|.++.+ |+|||+||||++.+.. ||+|+.|++ ++++.|++++..
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~-~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNR-HLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcC-eeEeccChhhcc
Confidence 9999999999999999999999999999999999999765 8999999999999877 999999955 899999999987
Q ss_pred hc
Q 001580 889 SN 890 (1050)
Q Consensus 889 ~~ 890 (1050)
..
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 53
No 110
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-43 Score=383.66 Aligned_cols=226 Identities=38% Similarity=0.644 Sum_probs=205.9
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++|++++|++...++++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 46899999996542369999999999999999999999999999999999999999999999999887777778889999
Q ss_pred EcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 001580 746 IPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 824 (1050)
Q Consensus 746 v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~il 824 (1050)
+||++.+|..|+++|+.++.. ....++.+.++..++.++++.+|.|+++..+..+.+||||||||++|||||+.+|++|
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998999999986533 2445566677778889999999999999999889999999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhcC
Q 001580 825 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNE 891 (1050)
Q Consensus 825 lLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~ 891 (1050)
||||||++||+.++..+.+.|+++.++.|+|++||+++.+..||++++|++|++++.|+++++....
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 227 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQG 227 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcC
Confidence 9999999999999999999999987789999999999999889999999999999999999987653
No 111
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=5.3e-44 Score=396.54 Aligned_cols=248 Identities=28% Similarity=0.470 Sum_probs=220.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHH
Q 001580 6 WQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTS 85 (1050)
Q Consensus 6 ~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKST 85 (1050)
.|+..|+.|++|+.++|........ .-+++.....+.++++++.-| ..++++++++||++.+|+.++|||||||||||
T Consensus 300 kq~~~Ar~s~~Rl~~lL~~~p~~~~-~m~LP~P~g~L~Ve~l~~~PP-g~~~pil~~isF~l~~G~~lgIIGPSgSGKST 377 (580)
T COG4618 300 KQFVAARQSYKRLNELLAELPAAAE-RMPLPAPQGALSVERLTAAPP-GQKKPILKGISFALQAGEALGIIGPSGSGKST 377 (580)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccC-CCCCCCCCceeeEeeeeecCC-CCCCcceecceeEecCCceEEEECCCCccHHH
Confidence 4789999999999999997542221 122222234589999999776 44689999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhc-cCCCCCHHHHHHHHHHhCcHHHHhc
Q 001580 86 LISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNIL-FGSAFEPARYEKAIDVTSLQHDLDL 152 (1050)
Q Consensus 86 Ll~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~-~g~~~~~~~~~~~~~~~~l~~~~~~ 152 (1050)
|.|+|.|..+|.+|.+.. ..++|||+||+-.||++||.|||. |+...+.+++.++.+.++.++-+-.
T Consensus 378 LaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~ 457 (580)
T COG4618 378 LARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILR 457 (580)
T ss_pred HHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHh
Confidence 999999999999887642 234699999999999999999996 7767788888899999999999999
Q ss_pred CCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh
Q 001580 153 LPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ 232 (1050)
Q Consensus 153 ~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~ 232 (1050)
+|+||+|.||++|.+|||||||||+||||||.+|.+++||||.|+||.+.+..+.+.+...+.+|.|+|+|||+.+.+..
T Consensus 458 lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~ 537 (580)
T COG4618 458 LPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALAS 537 (580)
T ss_pred CcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999988888899999999999999999
Q ss_pred cCEEEEEcCCeEeeccChhhhhc
Q 001580 233 VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 233 ~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
+|+|.+|++|++..-|+.+|++.
T Consensus 538 ~Dkilvl~~G~~~~FG~r~eVLa 560 (580)
T COG4618 538 VDKILVLQDGRIAAFGPREEVLA 560 (580)
T ss_pred cceeeeecCChHHhcCCHHHHHH
Confidence 99999999999988888877653
No 112
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.3e-43 Score=431.76 Aligned_cols=262 Identities=27% Similarity=0.469 Sum_probs=227.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCc
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 82 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsG 82 (1050)
.++..+..++++.+||.++++.++.......+.++....|+++|++|+|+. +++++|+|+||++++|++++|+||||||
T Consensus 275 ~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~I~~~~v~~~y~~-~~~~~l~~i~~~i~~G~~~~ivG~sGsG 353 (569)
T PRK10789 275 WMFNIVERGSAAYSRIRAMLAEAPVVKDGSEPVPEGRGELDVNIRQFTYPQ-TDHPALENVNFTLKPGQMLGICGPTGSG 353 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCcEEEEEEEEECCC-CCCccccCeeEEECCCCEEEEECCCCCC
Confidence 456788899999999999998754221111111112235999999999974 3467999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCC-CCCHHHHHHHHHHhCcHHH
Q 001580 83 KTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGS-AFEPARYEKAIDVTSLQHD 149 (1050)
Q Consensus 83 KSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~-~~~~~~~~~~~~~~~l~~~ 149 (1050)
||||+++|+|+++|++|.+.. ++..++||+|+|++|++|++|||.++. ...++++..+++.+++.++
T Consensus 354 KSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~ 433 (569)
T PRK10789 354 KSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDD 433 (569)
T ss_pred HHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHH
Confidence 999999999999999887543 234699999999999999999999985 3567788888999999999
Q ss_pred HhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcch
Q 001580 150 LDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHF 229 (1050)
Q Consensus 150 ~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~ 229 (1050)
+..+|.|++|.+|++|.+||||||||++|||||+++|+++||||||++||+++++.+++.+.+. .+|+|+|+|||+++.
T Consensus 434 i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~-~~~~tii~itH~~~~ 512 (569)
T PRK10789 434 ILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQW-GEGRTVIISAHRLSA 512 (569)
T ss_pred HHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHH-hCCCEEEEEecchhH
Confidence 9999999999999999999999999999999999999999999999999999999999987664 368999999999999
Q ss_pred hhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHH
Q 001580 230 LSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMEN 266 (1050)
Q Consensus 230 l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~ 266 (1050)
+..+|+|++|++|++++.|+++++.+..+.|+.+...
T Consensus 513 ~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~ 549 (569)
T PRK10789 513 LTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRY 549 (569)
T ss_pred HHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHH
Confidence 9999999999999999999999999888888887764
No 113
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-44 Score=372.38 Aligned_cols=197 Identities=27% Similarity=0.385 Sum_probs=171.1
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.+++++|+++|+. ..+|+|+||+|++||+++|+||||||||||+|+|+|+.+|++|+|.++|.++.... ..++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~-----~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPG-----PDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCC-----CCEE
Confidence 3899999999976 37999999999999999999999999999999999999999999999999885433 4799
Q ss_pred EEcCCcccccc-cHHHhcccCCCC-------CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSEH-------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~~-------~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
||+|++.||.. ||++|+.+.-+. ..+.+.+.++.+++.++-++.| .+||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHHH
Confidence 99999999997 999999764321 2234556666666666655554 6899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeC--CEEE
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDS--GRVL 879 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~--G~i~ 879 (1050)
|+.+|+|||||||+++||+.|+..+++.|.++. .++||++||||.+++-. +|||+||.+ |+|.
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999999999999999999998865 36999999999999766 999999998 5553
No 114
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-44 Score=398.66 Aligned_cols=217 Identities=28% Similarity=0.428 Sum_probs=193.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++||+++|++ ..+++|+||+|++||+++|+|||||||||+|++|+|+..|++|+|.++|+++..+++ .++.||
T Consensus 5 ~l~i~~v~k~yg~--~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp--~kR~ig 80 (352)
T COG3842 5 ALEIRNVSKSFGD--FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPP--EKRPIG 80 (352)
T ss_pred eEEEEeeeeecCC--eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh--hhcccc
Confidence 4999999999973 479999999999999999999999999999999999999999999999999999887 567899
Q ss_pred EEcCCcccccc-cHHHhcccCCC----CC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE----HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~----~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
+|+|+..||.. ||++|+.|+-. .. .+++.++++..++.++..+.| .+|||||||||||||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVALAR 149 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVALAR 149 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHHHH
Confidence 99999999976 99999987533 12 236777888877777766665 689999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 892 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 892 (1050)
||..+|++||||||.|+||..-+..++..|+++. .|.|.|+||||-++... +|||+||++|+|...|+|+|+...+.
T Consensus 150 AL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P~ 229 (352)
T COG3842 150 ALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERPA 229 (352)
T ss_pred HhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCcc
Confidence 9999999999999999999999999999888754 37999999999998766 99999999999999999999998776
Q ss_pred ChHH
Q 001580 893 SSFS 896 (1050)
Q Consensus 893 ~~~~ 896 (1050)
..|.
T Consensus 230 ~~fV 233 (352)
T COG3842 230 TRFV 233 (352)
T ss_pred hHHH
Confidence 5544
No 115
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.3e-44 Score=402.08 Aligned_cols=219 Identities=26% Similarity=0.422 Sum_probs=186.2
Q ss_pred EEEEEEEEEeCCC--CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---Hh
Q 001580 666 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LR 740 (1050)
Q Consensus 666 i~~~~v~~~y~~~--~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~r 740 (1050)
|+++||+++|+.+ ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..+++.+ .|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 236999999999999999999999999999999999999999999999999998877654 47
Q ss_pred hheEEEcCCccccc-ccHHHhcccCC---CCCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 001580 741 KILGIIPQSPVLFS-GTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 741 ~~i~~v~Q~~~lf~-~tv~~nl~~~~---~~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~ 812 (1050)
++|||+||++.+|. .|+++|+.+.. .... +++.++++..++. ......+.+||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~-----------~~~~~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLG-----------DKHDSYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-----------hhhhCChhhCCHHHHHHHH
Confidence 78999999999986 59999997421 1122 2234444444443 3344555789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||+.+|++|||||||++||+.+...+++.|+++.+ +.|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999999753 7899999999999977 99999999999999999999987
Q ss_pred cCCChH
Q 001580 890 NEGSSF 895 (1050)
Q Consensus 890 ~~~~~~ 895 (1050)
.+...+
T Consensus 231 ~p~~~~ 236 (343)
T TIGR02314 231 HPKTPL 236 (343)
T ss_pred CCCcHH
Confidence 654333
No 116
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-43 Score=364.01 Aligned_cols=222 Identities=31% Similarity=0.477 Sum_probs=185.4
Q ss_pred cEEEEEEEEEeCCCC--CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCCh-HHHhh
Q 001580 665 SIKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL-MDLRK 741 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~--~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~-~~~r~ 741 (1050)
.++++|+++.|+.+. .++|+||||+|.+||++||+|+||||||||.++|+|+.+|++|+|.++|.++....+ ...++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 489999999997541 149999999999999999999999999999999999999999999999987765432 35677
Q ss_pred heEEEcCCccc-cc--ccHHHhcc-cCC----CCCHHHHHHHHHHhcHH-HHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 001580 742 ILGIIPQSPVL-FS--GTVRFNLD-PFS----EHSDADLWEALERAHLK-DAIRRNSLGLDAQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 742 ~i~~v~Q~~~l-f~--~tv~~nl~-~~~----~~~~~~~~~~l~~~~~~-~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~ 812 (1050)
.+.+|||||.- ++ .||++-|. +.. .....++.++++.+++. +++.+.| ..|||||+||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 89999999952 33 27777663 211 12344577777777764 4444444 679999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||.-+|++||||||||+||+-..+.|++.|.++.+ +-|.|+||||+..+.. ||||+||++|+++|.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999999998765 4599999999999988 99999999999999999999987
Q ss_pred cCCChHHH
Q 001580 890 NEGSSFSK 897 (1050)
Q Consensus 890 ~~~~~~~~ 897 (1050)
.....|.+
T Consensus 232 ~~~h~ytr 239 (252)
T COG1124 232 HPSHPYTR 239 (252)
T ss_pred CCccHHHH
Confidence 64444544
No 117
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.5e-43 Score=439.14 Aligned_cols=261 Identities=28% Similarity=0.436 Sum_probs=228.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCC-CCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCC
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLPN-PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGE 81 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~-~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGs 81 (1050)
.++..+.+++++++|+.++++.++...... .+.+.....|+++|++|+|+.. ++++|+|+||++++|++++|+|+|||
T Consensus 416 ~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGs 494 (694)
T TIGR01846 416 QLWQDFQQTGIALERLGDILNSPTEPRSAGLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGS 494 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCC
Confidence 456788899999999999998765322111 1111112359999999999743 45799999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcHH
Q 001580 82 GKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQH 148 (1050)
Q Consensus 82 GKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~~ 148 (1050)
|||||+++|+|+++|++|.+.. ++..|+||||+|.+|++||+|||.++.+ .+.++..++++.+++.+
T Consensus 495 GKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~ 574 (694)
T TIGR01846 495 GKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHD 574 (694)
T ss_pred CHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHH
Confidence 9999999999999999886542 2346999999999999999999999753 55778888999999999
Q ss_pred HHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcc
Q 001580 149 DLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLH 228 (1050)
Q Consensus 149 ~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~ 228 (1050)
.++.+|.|.+|.+|++|.+||||||||++|||||+++|++|||||||++||+.+++.+.+.+.+. .+++|+|+|||+++
T Consensus 575 ~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~-~~~~t~i~itH~~~ 653 (694)
T TIGR01846 575 FISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREI-CRGRTVIIIAHRLS 653 (694)
T ss_pred HHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHH-hCCCEEEEEeCChH
Confidence 99999999999999999999999999999999999999999999999999999999999988765 36899999999999
Q ss_pred hhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHH
Q 001580 229 FLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLME 265 (1050)
Q Consensus 229 ~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 265 (1050)
.+..||+|++|++|+++++|+++++.+..+.|+.+..
T Consensus 654 ~~~~~d~ii~l~~G~i~~~g~~~~l~~~~~~y~~l~~ 690 (694)
T TIGR01846 654 TVRACDRIIVLEKGQIAESGRHEELLALQGLYARLWQ 690 (694)
T ss_pred HHHhCCEEEEEeCCEEEEeCCHHHHHHcCChHHHHHH
Confidence 9999999999999999999999999988888988775
No 118
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-44 Score=389.77 Aligned_cols=261 Identities=26% Similarity=0.472 Sum_probs=228.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcc-cCCC-CCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCc
Q 001580 5 AWQVVNANVSLKRMEEFLLAEEKI-LLPN-PPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 82 (1050)
Q Consensus 5 i~~~~~a~~s~~Ri~~fl~~~e~~-~~~~-~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsG 82 (1050)
.-++.++.+-+.|+-|.|++|+.. +.|+ +|.....-.|+++|++|.|+ +++|+|+||||++.+|+.+|+|||+|+|
T Consensus 499 YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaG 576 (790)
T KOG0056|consen 499 YRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAG 576 (790)
T ss_pred HHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCc
Confidence 345678899999999999987543 4454 33333334599999999997 4689999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCCC-CHHHHHHHHHHhCcHHH
Q 001580 83 KTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSAF-EPARYEKAIDVTSLQHD 149 (1050)
Q Consensus 83 KSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~~-~~~~~~~~~~~~~l~~~ 149 (1050)
|||++++|..+++..+|.+.. .|+.||+||||..||+.||..||.++.+. ..+++.++.+++++++.
T Consensus 577 KSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdr 656 (790)
T KOG0056|consen 577 KSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDR 656 (790)
T ss_pred hhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHH
Confidence 999999999999988876543 35569999999999999999999999754 34667778899999999
Q ss_pred HhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcch
Q 001580 150 LDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHF 229 (1050)
Q Consensus 150 ~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~ 229 (1050)
+-.+|.|+.|.+||+|-.||||+|||||+||+++..|.+++|||.||+||..+++.|...+.+.. .++|.|+|.|+++.
T Consensus 657 Il~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlc-a~RTtIVvAHRLST 735 (790)
T KOG0056|consen 657 ILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLC-ANRTTIVVAHRLST 735 (790)
T ss_pred HhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHh-cCCceEEEeeeehh
Confidence 99999999999999999999999999999999999999999999999999999999977665543 57999999999999
Q ss_pred hhhcCEEEEEcCCeEeeccChhhhhcC-hHHHHHHHHHhh
Q 001580 230 LSQVDRIILVHEGMVKEEGTFEDLSNN-GELFQKLMENAG 268 (1050)
Q Consensus 230 l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~l~~~~~ 268 (1050)
+-+||.|+++++|+|++.|+++|+..+ ++.|+.++..+.
T Consensus 736 ivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~qq 775 (790)
T KOG0056|consen 736 IVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQQ 775 (790)
T ss_pred eecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHHH
Confidence 999999999999999999999999877 889999996543
No 119
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-43 Score=378.15 Aligned_cols=224 Identities=43% Similarity=0.712 Sum_probs=205.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|+++ ..+++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4689999999643 369999999999999999999999999999999999999999999999999988888788889999
Q ss_pred EcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 001580 746 IPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 824 (1050)
Q Consensus 746 v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~il 824 (1050)
+||++.+|+.|+++|+.+... ..+..+.+.++..++.+.+..+|.|+++.+.....+||||||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999976432 3455667778888899999999999999999999999999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 825 VLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 825 lLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
||||||++||+.+...+.+.|.+..++.|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~ 225 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK 225 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 999999999999999999999987668899999999999988999999999999999999988764
No 120
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5e-43 Score=424.88 Aligned_cols=251 Identities=27% Similarity=0.406 Sum_probs=217.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCc
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 82 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsG 82 (1050)
..+..+.++++|++|+.++++.++.... ..+.++....|+++|++|+|+.. ++++|+|+||++++|++++|+|+||||
T Consensus 279 ~~~~~~~~~~~~~~ri~~~l~~~~~~~~-~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsG 356 (544)
T TIGR01842 279 GGWKQFSGARQAYKRLNELLANYPSRDP-AMPLPEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSG 356 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccC-CCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCC
Confidence 4667788999999999999987653221 11111122359999999999742 358999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcHHH
Q 001580 83 KTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHD 149 (1050)
Q Consensus 83 KSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~~~ 149 (1050)
||||+++|+|+++|++|.+.. .+..++||||+|++|++|++||+.++.+ .+++++..+++.+++.+.
T Consensus 357 KSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~ 436 (544)
T TIGR01842 357 KSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHEL 436 (544)
T ss_pred HHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHH
Confidence 999999999999999886542 2346999999999999999999986643 567788888999999999
Q ss_pred HhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcch
Q 001580 150 LDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHF 229 (1050)
Q Consensus 150 ~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~ 229 (1050)
++.+|.|++|.+|++|.+||||||||++|||||+++|++|||||||++||+++++.+.+.+.+...+|+|+|++||+++.
T Consensus 437 i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~ 516 (544)
T TIGR01842 437 ILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSL 516 (544)
T ss_pred HHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999876654468999999999999
Q ss_pred hhhcCEEEEEcCCeEeeccChhhhhc
Q 001580 230 LSQVDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 230 l~~~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
++.||+|++|++|++++.|+++++.+
T Consensus 517 ~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 517 LGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred HHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 98899999999999999999988753
No 121
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7.2e-44 Score=349.85 Aligned_cols=206 Identities=28% Similarity=0.429 Sum_probs=185.7
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---Hhhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~r~~ 742 (1050)
|+|+||+++|+.+ +++|+||||+|++||.+-|+||||||||||+|+|.+..+|++|+|.++|.|+.++...+ +|++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7899999999876 57999999999999999999999999999999999999999999999999998877654 7999
Q ss_pred eEEEcCCcccccc-cHHHhcccCC-------CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 743 LGIIPQSPVLFSG-TVRFNLDPFS-------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 743 i~~v~Q~~~lf~~-tv~~nl~~~~-------~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
||+|+||.-|... ||.||+.+.- .....++.++|+.+++.+-...+| .+||||||||++||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHHH
Confidence 9999999987755 9999997531 123466888899999988888887 57999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecC
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 883 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~ 883 (1050)
||++++|++||-||||-+|||++...|++.+.+.. .|.|||+.|||.+.+.. -.|++.+++|+++....
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 99999999999999999999999999999998864 58999999999999988 78999999999987543
No 122
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-44 Score=353.69 Aligned_cols=217 Identities=26% Similarity=0.454 Sum_probs=186.0
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
+++.+++++|++. ..+++||||+++.||++||+|||||||||+|++|++++.|++|.|++||.|+.+ .|...|++||+
T Consensus 2 l~v~~l~K~y~~~-v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGSK-VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccCH-HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcce
Confidence 6889999999763 359999999999999999999999999999999999999999999999999977 55789999999
Q ss_pred EcCCcccccc-cHHHhcccCCCC---CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSEH---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~~---~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
++-+..++.. |++|||.++... .+.++. +.+.+...+ .++......+..+||-|+||||+|||||+++|
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~k-----ari~~l~k~--l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P 152 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIK-----ARIAELSKR--LQLLEYLDRRVGEFSTGMKQKVAIARALVHDP 152 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHH-----HHHHHHHHH--hChHHHHHHHHhhhchhhHHHHHHHHHHhcCC
Confidence 9988888865 999999876431 222211 122223333 24555555566789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 891 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 891 (1050)
++++|||||||||..+.+.+++.+.+... |++||+.||.|++++. ||||+++++|+++..|+++++.++.
T Consensus 153 ~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~ 224 (245)
T COG4555 153 SILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDART 224 (245)
T ss_pred CeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHH
Confidence 99999999999999999999999999765 8999999999999997 9999999999999999999998653
No 123
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=7.3e-43 Score=374.58 Aligned_cols=218 Identities=37% Similarity=0.596 Sum_probs=197.5
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|+++.|+....++++|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++...++..+++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (220)
T cd03245 2 RIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIG 81 (220)
T ss_pred eEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEE
Confidence 48999999999643246999999999999999999999999999999999999999999999999988777777788999
Q ss_pred EEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 001580 745 IIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 823 (1050)
Q Consensus 745 ~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~i 823 (1050)
|+||++.+|..|+.+|+.+... ....++.+.++..++.+.+..+|.|+++.+.+...+||||||||++||||++.+|++
T Consensus 82 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~l 161 (220)
T cd03245 82 YVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPI 161 (220)
T ss_pred EeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999888899999976432 244567778888899999999999999998888899999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEec
Q 001580 824 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYD 882 (1050)
Q Consensus 824 llLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g 882 (1050)
|||||||++||+.+...+++.|+++.+++|+|++||+++.++.||++++|++|++++.|
T Consensus 162 lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 162 LLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999999999999976668999999999988669999999999998754
No 124
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-43 Score=375.51 Aligned_cols=214 Identities=29% Similarity=0.509 Sum_probs=192.2
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecC-CCChHHHhhhe
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA-KFGLMDLRKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~-~~~~~~~r~~i 743 (1050)
.++++|++|+|+++ .++|+++||+|++||.++|+|+||||||||+++|.|+++|++|+|.++|.++. ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 38899999999766 58999999999999999999999999999999999999999999999999988 47788899999
Q ss_pred EEEcCCc--ccccccHHHhcccCCC---CC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 744 GIIPQSP--VLFSGTVRFNLDPFSE---HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 744 ~~v~Q~~--~lf~~tv~~nl~~~~~---~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
|||+|+| .+|..||.+.+.|+.. .. +.++.++++.+++.++.++.| .+|||||||||+||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 6889999999987542 12 344667777777777655544 57999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
.+|+.+|++|||||||++||+...+.+.+.++++.+ ++|+|++|||++.+.. |||+++|++|+++.+|+|.++.++
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 999999999999999999999999999999999764 4799999999999988 999999999999999999998764
No 125
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1e-42 Score=377.92 Aligned_cols=225 Identities=41% Similarity=0.660 Sum_probs=203.1
Q ss_pred EEEEEEEEEeCCC-CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 666 IKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 666 i~~~~v~~~y~~~-~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
++++|++++|++. ..++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4689999999642 236999999999999999999999999999999999999999999999999988777777788899
Q ss_pred EEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 001580 745 IIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 823 (1050)
Q Consensus 745 ~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~i 823 (1050)
|+||++.+|..|+++|+.+... ....++.+.++..++.+++..+|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999998899999976432 234556667777788899999999999999988999999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 824 LVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 824 llLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|||||||++||+.+++.+.+.|+++.+++|+|++||+++++..||++++|++|++++.|+.+++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 9999999999999999999999987678999999999999988999999999999999999888754
No 126
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-43 Score=356.80 Aligned_cols=213 Identities=28% Similarity=0.413 Sum_probs=183.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCC---hHHHhh
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG---LMDLRK 741 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~---~~~~r~ 741 (1050)
.|+++||+++|+++ +.+|+||||+|++||+++|+||||||||||+++|.|+.+|++|+|.++|.++.+.. .+.+|+
T Consensus 3 ~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 48999999999744 47999999999999999999999999999999999999999999999999998887 445688
Q ss_pred heEEEcCCcccccc-cHHHhcccC------------CCCCHHH---HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCCh
Q 001580 742 ILGIIPQSPVLFSG-TVRFNLDPF------------SEHSDAD---LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSV 805 (1050)
Q Consensus 742 ~i~~v~Q~~~lf~~-tv~~nl~~~------------~~~~~~~---~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSg 805 (1050)
+||+++|++.|-+. ||.+|+..+ .-.+.++ ..++|++.+ +....-.+..+|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervg-----------i~~~A~qra~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVG-----------ILDKAYQRASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcC-----------cHHHHHHHhccCCc
Confidence 89999999998865 999998432 1223333 334444444 44444556678999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 806 GQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 806 Gq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
||+|||+|||||+++|+|+|-|||+++|||.+.+.+++.|++.. .|.|+|+.-|+++.+.+ ||||+-|++|+|+..|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999999864 57999999999999977 9999999999999999
Q ss_pred ChhHHhh
Q 001580 883 TPEELLS 889 (1050)
Q Consensus 883 ~~~el~~ 889 (1050)
+++|+-+
T Consensus 231 ~~~el~~ 237 (258)
T COG3638 231 PASELTD 237 (258)
T ss_pred ChhhhhH
Confidence 9999643
No 127
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.5e-43 Score=362.82 Aligned_cols=204 Identities=29% Similarity=0.412 Sum_probs=170.9
Q ss_pred EEEEEEEEEeCCCC--CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---H-
Q 001580 666 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L- 739 (1050)
Q Consensus 666 i~~~~v~~~y~~~~--~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~- 739 (1050)
++++||++.|..+. ..+|+++||+|++||.++|+|||||||||||++|.|+..|++|.|.++|.|+..++... +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 36999999999999999999999999999999999999999999999999999888544 3
Q ss_pred hhheEEEcCCcccccc-cHHHhccc---CCCCC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 001580 740 RKILGIIPQSPVLFSG-TVRFNLDP---FSEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 811 (1050)
Q Consensus 740 r~~i~~v~Q~~~lf~~-tv~~nl~~---~~~~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl 811 (1050)
|++||||+|+..|... |++||+.+ +.... .....+.++..++.+... ...+.+|||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 5569999999998876 99999973 22221 122333333334433222 144578999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhhcCEEEEEeCCEEE
Q 001580 812 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVL 879 (1050)
Q Consensus 812 ~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~ 879 (1050)
||||||+.+|+|+|.||||.+||.++.+.|++.+++.. .|+|+|+||||......|||++.|.+|++.
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999999999974 378999999999999999999999999953
No 128
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-43 Score=379.28 Aligned_cols=216 Identities=29% Similarity=0.457 Sum_probs=181.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCCh---HHHhhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL---MDLRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~---~~~r~~ 742 (1050)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++ ..+|+.
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGGR--TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 4689999999643 69999999999999999999999999999999999999999999999999887664 457888
Q ss_pred eEEEcCCcccccc-cHHHhcccCC----CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 743 LGIIPQSPVLFSG-TVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 743 i~~v~Q~~~lf~~-tv~~nl~~~~----~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
|+|+||++.+|.. |+++|+.+.. .....+..+ .+.+.++.+ |+.........+||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~al 151 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIRE-----IVLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARAL 151 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 9999999999876 9999996531 112222111 112233332 444444555678999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
+.+|+||||||||++||+.++..+.+.|+++.+ ++|||+|||+++++.. ||+|++|++|++++.|+++++...
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 152 ALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 999999999999999999999999999998653 7899999999999876 999999999999999999998753
No 129
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5.3e-43 Score=340.50 Aligned_cols=209 Identities=29% Similarity=0.430 Sum_probs=187.4
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
+.+++|.|+|.. .=-.++++|++||++||+||||||||||+|+|+||..|.+|+|.++|+|....+| .++-+++
T Consensus 2 l~L~~V~~~y~~----~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P--~~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH----LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPP--AERPVSM 75 (231)
T ss_pred ccccceEEeeCc----ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCc--ccCChhh
Confidence 567899999963 2246789999999999999999999999999999999999999999999988777 4567999
Q ss_pred EcCCcccccc-cHHHhcccCC----CC---CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFS----EH---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~----~~---~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
++|+..||.. ||.+|+.++- +. ..+.+..++.++|+.++..++| .+||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHHH
Confidence 9999999987 9999997542 11 2456888999999999999998 47999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 891 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 891 (1050)
+++-+||+||||+|+|||.-+..+...+.++. ++.|+++|||.++.+.. +|+++++++|||.+.|..+++.+..
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 99999999999999999999999999998865 46899999999999887 9999999999999999999998754
No 130
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.7e-42 Score=378.28 Aligned_cols=183 Identities=24% Similarity=0.358 Sum_probs=138.9
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++..+++++|++- .|.-=.=+|..||++|++||||-||||++++|+|.++|++|. ..+ -+++|
T Consensus 343 v~y~~~~k~~g~F---~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSy 405 (591)
T COG1245 343 VEYPDLKKTYGDF---KLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSY 405 (591)
T ss_pred eecchheeecCce---EEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEee
Confidence 4445555555421 222222345667899999999999999999999999999998 222 26899
Q ss_pred EcCCcc-cccccHHHhcccCCC--CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 746 IPQSPV-LFSGTVRFNLDPFSE--HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 746 v~Q~~~-lf~~tv~~nl~~~~~--~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
-||--. -|++||++-|.-... ..+.- ....+. .|..++..+......|||||.|||+||.+|.++++
T Consensus 406 KPQyI~~~~~gtV~~~l~~~~~~~~~~s~---------~~~ei~-~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reAD 475 (591)
T COG1245 406 KPQYISPDYDGTVEDLLRSAIRSAFGSSY---------FKTEIV-KPLNLEDLLERPVDELSGGELQRVAIAAALSREAD 475 (591)
T ss_pred cceeecCCCCCcHHHHHHHhhhhhcccch---------hHHhhc-CccchHHHHhcccccCCchhHHHHHHHHHhccccC
Confidence 999763 478899986632110 11111 111111 26677777777778999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeC
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDS 875 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~ 875 (1050)
++|||||++.||.+.+-.+-+.|++.. .++|.++|-||+..+.. +||++|++.
T Consensus 476 lYllDEPSA~LDvEqR~~vakvIRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~G 531 (591)
T COG1245 476 LYLLDEPSAYLDVEQRIIVAKVIRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEG 531 (591)
T ss_pred EEEecCchhhccHHHHHHHHHHHHHHHhhcCceEEEEecceehhhhhhceEEEEec
Confidence 999999999999999999999999865 46899999999999988 999999963
No 131
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2e-42 Score=421.79 Aligned_cols=261 Identities=25% Similarity=0.383 Sum_probs=224.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCC-CC-CCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCC
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLP-NP-PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTG 80 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~-~~-~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nG 80 (1050)
.++..+..++++++|+.++++.++....+ .+ +.+.....|+++|++|+|+. ++++|+|+||++++|++++|+|+||
T Consensus 294 ~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sG 371 (585)
T TIGR01192 294 GFITQIFEARAKLEDFFDLEDSVFQREEPADAPELPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTG 371 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccCCccCCCCCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCC
Confidence 45677789999999999999865322111 11 11112235999999999973 2468999999999999999999999
Q ss_pred CcHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcH
Q 001580 81 EGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQ 147 (1050)
Q Consensus 81 sGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~ 147 (1050)
||||||+++|+|+++|++|.+.. ++..++||||+|++|++|++|||.++.+ .++++...+++.+++.
T Consensus 372 sGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~ 451 (585)
T TIGR01192 372 AGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAH 451 (585)
T ss_pred CCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcH
Confidence 99999999999999999886542 2346999999999999999999999853 4566777888889999
Q ss_pred HHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCc
Q 001580 148 HDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQL 227 (1050)
Q Consensus 148 ~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~ 227 (1050)
+.+..+|+|++|.+|++|.+||||||||++|||||+.+|+++||||||++||+++++.+.+.+.+. ..++|+|+|||++
T Consensus 452 ~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~-~~~~tvI~isH~~ 530 (585)
T TIGR01192 452 DFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDAL-RKNRTTFIIAHRL 530 (585)
T ss_pred HHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHH-hCCCEEEEEEcCh
Confidence 999999999999999999999999999999999999999999999999999999999999977654 4589999999999
Q ss_pred chhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHH
Q 001580 228 HFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMEN 266 (1050)
Q Consensus 228 ~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~ 266 (1050)
+.+..+|+|++|++|++++.|+++++.++.+.|..++..
T Consensus 531 ~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~ 569 (585)
T TIGR01192 531 STVRNADLVLFLDQGRLIEKGSFQELIQKDGRFYKLLRR 569 (585)
T ss_pred HHHHcCCEEEEEECCEEEEECCHHHHHHCCChHHHHHHh
Confidence 999999999999999999999999999888888887754
No 132
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-43 Score=370.04 Aligned_cols=216 Identities=27% Similarity=0.434 Sum_probs=187.4
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCe---ecCCCChHHHhhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGF---DIAKFGLMDLRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~---~i~~~~~~~~r~~ 742 (1050)
|+++++++.|+.. ++++|||++|+.||.+|+.|||||||||||++|+|+..|++|+|.++|. |.++.. ...++
T Consensus 3 i~i~~~~~~~~~~--~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~R~ 78 (345)
T COG1118 3 IRINNVKKRFGAF--GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRDRK 78 (345)
T ss_pred eeehhhhhhcccc--cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhhcc
Confidence 7889999999754 7999999999999999999999999999999999999999999999999 666533 34567
Q ss_pred eEEEcCCcccccc-cHHHhcccCCC---------CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 001580 743 LGIIPQSPVLFSG-TVRFNLDPFSE---------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 743 i~~v~Q~~~lf~~-tv~~nl~~~~~---------~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~ 812 (1050)
||+|+|+..||.. ||++||.|+.+ ..+.++.+.|+.+.+..+-++.| .+||||||||+|
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHHH
Confidence 9999999999965 99999987641 12344566666666666655555 689999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||.-+|++||||||+++||+.-+..+.+-|++.. .+.|+++||||.+++.. ||||++|++|+|...|+++|+..
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 9999999999999999999999999999999998865 37999999999999876 99999999999999999999988
Q ss_pred cCCChHH
Q 001580 890 NEGSSFS 896 (1050)
Q Consensus 890 ~~~~~~~ 896 (1050)
.+.+.|-
T Consensus 228 ~P~s~fV 234 (345)
T COG1118 228 HPASRFV 234 (345)
T ss_pred CCCccce
Confidence 7765543
No 133
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.6e-42 Score=366.64 Aligned_cols=207 Identities=61% Similarity=0.992 Sum_probs=182.3
Q ss_pred CCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH
Q 001580 660 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL 739 (1050)
Q Consensus 660 ~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~ 739 (1050)
||..+.++++|++++|+....++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 45567799999999997533369999999999999999999999999999999999999999999999999988887788
Q ss_pred hhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 740 RKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 740 r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
|+.++|+||++.+|..|+++|+.++.....+++.++++ ++.....|||||+||++||||++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 88999999999999899999997654333333332222 234567899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecCh
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTP 884 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~ 884 (1050)
+|++|||||||++||+.++..+++.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999997678999999999999877999999999999988764
No 134
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-42 Score=394.25 Aligned_cols=214 Identities=21% Similarity=0.374 Sum_probs=184.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|+++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.++.+.++. ++.|||
T Consensus 4 l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig~ 80 (356)
T PRK11650 4 LKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIAM 80 (356)
T ss_pred EEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEEE
Confidence 8999999999422 3699999999999999999999999999999999999999999999999999887764 478999
Q ss_pred EcCCcccccc-cHHHhcccCCC---CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~---~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
|||++.+|.. ||++|+.+... ... +++.++++..++.++. ...+.+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGq~QRvalARAL 149 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLL-----------DRKPRELSGGQRQRVAMGRAI 149 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHh-----------hCChhhCCHHHHHHHHHHHHH
Confidence 9999999964 99999975422 121 2344555555554444 444568999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 893 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 893 (1050)
+.+|++|||||||++||+.++..+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|+++++..++..
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 999999999999999999999999999988653 7899999999999876 999999999999999999999876543
No 135
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.5e-44 Score=351.59 Aligned_cols=223 Identities=28% Similarity=0.451 Sum_probs=188.6
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH-hhhe
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~-r~~i 743 (1050)
.+.++|+.++|..+ +++++|||+|.+||+||++|||||||||.+.++.|+.+|++|+|.+||.||+.++.... |..|
T Consensus 4 ~L~a~~l~K~y~kr--~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGi 81 (243)
T COG1137 4 TLVAENLAKSYKKR--KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGI 81 (243)
T ss_pred EEEehhhhHhhCCe--eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCc
Confidence 48899999999654 79999999999999999999999999999999999999999999999999999998764 5569
Q ss_pred EEEcCCcccccc-cHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
||+||++.+|.. ||++||...-+....+.........+...++.| .+.......+.+||||||+|+.|||||..+|+
T Consensus 82 gYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~ 159 (243)
T COG1137 82 GYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAANPK 159 (243)
T ss_pred ccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhcCCC
Confidence 999999999987 999999643222111112222233344445443 45555666778999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchh-hhhcCEEEEEeCCEEEEecChhHHhhcC
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT-IIDCDRILLLDSGRVLEYDTPEELLSNE 891 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~-~~~~d~i~vl~~G~i~~~g~~~el~~~~ 891 (1050)
++|||||++|+||.+...|++.++.+. +|-.|+++-|+..+ +.-|||.+++.+|+|.+.|+|+|+.+++
T Consensus 160 fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~ 230 (243)
T COG1137 160 FILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNE 230 (243)
T ss_pred EEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcCh
Confidence 999999999999999999999998875 47889999999766 5559999999999999999999998765
No 136
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.2e-42 Score=389.23 Aligned_cols=216 Identities=28% Similarity=0.447 Sum_probs=183.2
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++||
T Consensus 7 ~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ig 83 (306)
T PRK13537 7 PIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRVG 83 (306)
T ss_pred eEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcEE
Confidence 4999999999974 36999999999999999999999999999999999999999999999999997654 45788999
Q ss_pred EEcCCccccc-ccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 745 IIPQSPVLFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 745 ~v~Q~~~lf~-~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
|+||++.+|. .|+++|+.++.. ....+..+ .+.++++. .|+.........+||||||||++|||||+++
T Consensus 84 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~--~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~ 156 (306)
T PRK13537 84 VVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARA-----LVPPLLEF--AKLENKADAKVGELSGGMKRRLTLARALVND 156 (306)
T ss_pred EEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHH--cCCchHhcCchhhCCHHHHHHHHHHHHHhCC
Confidence 9999999886 599999975322 12221111 12233333 2444444555568999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|++|||||||+|||+.+++.+++.|+++. .|+|||++||++++++. ||||++|++|++++.|+++++...
T Consensus 157 P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 157 PDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999875 47899999999999987 999999999999999999999764
No 137
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-42 Score=387.16 Aligned_cols=220 Identities=20% Similarity=0.373 Sum_probs=186.2
Q ss_pred ccEEEEEEEEEeCCC---CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCC------
Q 001580 664 GSIKFEDVVLRYRPE---LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF------ 734 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~---~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~------ 734 (1050)
..|+++|++|+|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 359999999999642 13699999999999999999999999999999999999999999999999998653
Q ss_pred ----------ChHHHhhheEEEcCCc--ccccccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhc
Q 001580 735 ----------GLMDLRKILGIIPQSP--VLFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLD-AQVSE 798 (1050)
Q Consensus 735 ----------~~~~~r~~i~~v~Q~~--~lf~~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~ 798 (1050)
....+|++|+||||+| .+|..|+++|+.+... .+.++.. + .+.++++.+ |++ ...+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~---~--~~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAK---K--LAKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHH---H--HHHHHHHHc--CCChhHhcC
Confidence 3456788999999998 6888899999975421 1222221 1 123455553 564 45777
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCC
Q 001580 799 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSG 876 (1050)
Q Consensus 799 ~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G 876 (1050)
.+.+||||||||++|||||+.+|+||||||||++||+.++..+.+.|+++. +++|||+|||+++++.. ||||++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 888999999999999999999999999999999999999999999998864 57899999999998865 9999999999
Q ss_pred EEEEecChhHHhhc
Q 001580 877 RVLEYDTPEELLSN 890 (1050)
Q Consensus 877 ~i~~~g~~~el~~~ 890 (1050)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999998754
No 138
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.4e-42 Score=374.22 Aligned_cols=209 Identities=32% Similarity=0.510 Sum_probs=177.5
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccc-----cCCccEEEECCeecCCCC--hHH
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV-----ELERGRILIDGFDIAKFG--LMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~-----~p~~G~i~~~g~~i~~~~--~~~ 738 (1050)
|+++||+++|+.. ++|+|+||+|++||++||+||||||||||+++|+|++ +|++|+|.++|.++...+ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 4789999999653 6999999999999999999999999999999999999 999999999999987766 456
Q ss_pred HhhheEEEcCCcccccccHHHhcccCCC---C-C----HHHHHHHHHHhcHHHHHHHccCCcchhhhcC--CCCCChhHH
Q 001580 739 LRKILGIIPQSPVLFSGTVRFNLDPFSE---H-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEA--GENFSVGQR 808 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~-~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~--~~~LSgGq~ 808 (1050)
+|++++|+||++.+|..|+++|+.+... . . ++++.++++..+ +....... +.+||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~~~LSgG~~ 147 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAA-----------LWDEVKDRLHALGLSGGQQ 147 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcC-----------CChHHhccCCcccCCHHHH
Confidence 7888999999999887799999975321 1 1 122333344433 33333333 478999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 001580 809 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 809 qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 887 (1050)
||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+.+|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 148 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 148 QRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 9999999999999999999999999999999999999987655899999999999876 999999999999999988764
No 139
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-42 Score=392.34 Aligned_cols=216 Identities=25% Similarity=0.411 Sum_probs=186.0
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++ .+++||
T Consensus 6 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~ig 81 (351)
T PRK11432 6 FVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDIC 81 (351)
T ss_pred EEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCEE
Confidence 4999999999964 369999999999999999999999999999999999999999999999999987664 457899
Q ss_pred EEcCCcccccc-cHHHhcccCCC---CC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE---HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~---~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
||||++.+|.. ||++|+.+... .. .+++.++++..++.++ ....+..|||||||||+||||
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~-----------~~r~~~~LSgGq~QRVaLARa 150 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGF-----------EDRYVDQISGGQQQRVALARA 150 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHHHH
Confidence 99999999975 99999976421 12 2234445555454443 344457899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 893 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 893 (1050)
|+.+|++|||||||++||+.++..+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|+++++..++..
T Consensus 151 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~ 230 (351)
T PRK11432 151 LILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPAS 230 (351)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCc
Confidence 9999999999999999999999999999998754 7899999999999866 999999999999999999999876654
Q ss_pred hH
Q 001580 894 SF 895 (1050)
Q Consensus 894 ~~ 895 (1050)
.|
T Consensus 231 ~~ 232 (351)
T PRK11432 231 RF 232 (351)
T ss_pred hH
Confidence 33
No 140
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.7e-42 Score=392.16 Aligned_cols=220 Identities=24% Similarity=0.396 Sum_probs=186.2
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.++...++ .++.+|
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~--~~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPP--QKRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCEE
Confidence 3899999999974 369999999999999999999999999999999999999999999999999987765 367899
Q ss_pred EEcCCccccc-ccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 745 IIPQSPVLFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 745 ~v~Q~~~lf~-~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
||||++.+|. .||++|+.+... .+..+.. ..+.++++.+ |++......+.+||||||||++|||||+.+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~~ 152 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALATS 152 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999996 599999975421 1111111 1223334432 455555666678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChH
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSF 895 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~ 895 (1050)
|++|||||||++||+.++..+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|+++++..++...|
T Consensus 153 P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~~~ 230 (353)
T TIGR03265 153 PGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPATPF 230 (353)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCCHH
Confidence 999999999999999999999999988653 7899999999999866 99999999999999999999987654433
No 141
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-42 Score=371.67 Aligned_cols=213 Identities=29% Similarity=0.468 Sum_probs=184.4
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++. ++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++...++..+|+.++|
T Consensus 4 l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~ 81 (241)
T PRK14250 4 IEFKEVSYSSFGK--EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGM 81 (241)
T ss_pred EEEEeEEEEeCCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEE
Confidence 8999999999643 69999999999999999999999999999999999999999999999999987777778889999
Q ss_pred EcCCcccccccHHHhcccCCCCC---HHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFSGTVRFNLDPFSEHS---DADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~~tv~~nl~~~~~~~---~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.+|..|+++|+.+..... ..++.+ +++.+ |++ ........+||||||||++||||++++|
T Consensus 82 ~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~---------~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 82 VFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEY---------YLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EecCchhchhhHHHHHhcchhhcCcHHHHHHH---------HHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999889999987532111 122333 33332 443 2345567789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 891 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 891 (1050)
++|||||||++||+.+++.+.+.|++.. .++|+|++||+++++.. ||+|++|++|++++.|+++++...+
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 223 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNP 223 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCC
Confidence 9999999999999999999999999864 37999999999999876 9999999999999999999987644
No 142
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-42 Score=391.47 Aligned_cols=220 Identities=27% Similarity=0.460 Sum_probs=185.1
Q ss_pred EEEEEEEEEeCC--CCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---Hh
Q 001580 666 IKFEDVVLRYRP--ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LR 740 (1050)
Q Consensus 666 i~~~~v~~~y~~--~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~r 740 (1050)
|+++|++++|+. ...++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999962 1246999999999999999999999999999999999999999999999999998877654 47
Q ss_pred hheEEEcCCccccc-ccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 741 KILGIIPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 741 ~~i~~v~Q~~~lf~-~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
++|||+||++.+|. .|+++|+.+.. .....+..+ .+.++++.+ |++........+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 78999999999886 59999997531 112221111 123334432 55555556667899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 892 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 892 (1050)
|+.+|+||||||||++||+.++..+++.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 233 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPK 233 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 9999999999999999999999999999998753 7899999999999877 99999999999999999999986543
No 143
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=4.2e-42 Score=416.16 Aligned_cols=222 Identities=31% Similarity=0.517 Sum_probs=192.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCC-C---CCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcC
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLPN-P---PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGG 78 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~-~---~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~ 78 (1050)
..+..+.++++|++|+.++++.++....+. + +..+....|+++|++|+|+. ++++|+|+||++++|++++||||
T Consensus 292 ~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~--~~~vL~~isl~i~~G~~vaIvG~ 369 (529)
T TIGR02868 292 AAAQALTRVRAAAERIEEVTGAKGPRPEGVVPAAGALGLGKPTLELRDLSFGYPG--SPPVLDGVSLDLPPGERVAILGP 369 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCcccCCCCceEEEEEEEEecCC--CCceeecceEEEcCCCEEEEECC
Confidence 356678899999999999998765321111 1 11112235999999999974 24699999999999999999999
Q ss_pred CCCcHHHHHHHHHcCCCCCCCCeeE-----------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCc
Q 001580 79 TGEGKTSLISAMLGELPPVSDASAV-----------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSL 146 (1050)
Q Consensus 79 nGsGKSTLl~~l~G~~~~~~g~~~~-----------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l 146 (1050)
||||||||+++|+|+++|++|.+.. +++.|+||||+|++|++||+|||.+|.+ .+++++.++++.+++
T Consensus 370 SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l 449 (529)
T TIGR02868 370 SGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGL 449 (529)
T ss_pred CCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCC
Confidence 9999999999999999999887643 1247999999999999999999999854 567889999999999
Q ss_pred HHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccC
Q 001580 147 QHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQ 226 (1050)
Q Consensus 147 ~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~ 226 (1050)
.+++..+|+|++|.+|++|.+||||||||++|||||+++|+|||||||||+||+++++.+.+.+.+. .+++|+|+|||+
T Consensus 450 ~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~-~~~~TvIiItHr 528 (529)
T TIGR02868 450 ADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAA-LSGKTVVVITHH 528 (529)
T ss_pred HHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHh-cCCCEEEEEecC
Confidence 9999999999999999999999999999999999999999999999999999999999999988653 467999999998
Q ss_pred c
Q 001580 227 L 227 (1050)
Q Consensus 227 ~ 227 (1050)
+
T Consensus 529 l 529 (529)
T TIGR02868 529 L 529 (529)
T ss_pred C
Confidence 5
No 144
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.9e-42 Score=382.51 Aligned_cols=213 Identities=33% Similarity=0.579 Sum_probs=185.9
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|+.+ ..+|+||||+|++||++|++||||||||||+++|+|++.|++|+|.++|.+...- ....|++||
T Consensus 4 ~i~~~~l~k~~~~~-~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGGD-KTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCCC-CEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 37889999999731 3799999999999999999999999999999999999999999999999998765 678899999
Q ss_pred EEcCCcccccc-cHHHhcccCCCC-------CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSEH-------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~~-------~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
|+||+|.++.. |++|||.++... .++++.+.++..++.+ .......+||+|||||++||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~-----------~~~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLED-----------KANKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCch-----------hhCcchhhcCHHHHHHHHHHHH
Confidence 99999998876 999999764321 1345556666655443 2234456899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC-C-cEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-S-CTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~~-~-~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|+++|++|||||||+||||.++..+++.|+++.+ + +||+++||.+++++. ||+|++|++|+++..|+++++...
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999999765 4 699999999999988 999999999999999999998754
No 145
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-42 Score=379.94 Aligned_cols=215 Identities=29% Similarity=0.441 Sum_probs=184.5
Q ss_pred cEEEEEEEEEeCCC-CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhhe
Q 001580 665 SIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~-~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i 743 (1050)
.++++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 38999999999642 23599999999999999999999999999999999999999999999999999887777888999
Q ss_pred EEEcCCcc--cccccHHHhcccCCC---CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 744 GIIPQSPV--LFSGTVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 744 ~~v~Q~~~--lf~~tv~~nl~~~~~---~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
+|+||+|. ++..||++|+.+... .+. +++.++++..++.+ .......+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQD-----------FKEREPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHh-----------HhhCCcccCCHHHHHHHHHH
Confidence 99999983 556799999975321 122 23444445444443 44445578999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|||+|||+++.+..||||++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 7899999999999877999999999999999999998754
No 146
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-42 Score=378.91 Aligned_cols=212 Identities=27% Similarity=0.400 Sum_probs=181.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|+.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 38999999999633 36999999999999999999999999999999999999999999999999998877778888999
Q ss_pred EEcCCc--ccccccHHHhcccCCC---CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 745 IIPQSP--VLFSGTVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 745 ~v~Q~~--~lf~~tv~~nl~~~~~---~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
|+||+| .++..|+.+|+.+... ... +++.++++.+++.++ .......||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDF-----------RDKPPYHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHH-----------hcCChhhCCHHHHHHHHHHH
Confidence 999998 5777899999975321 111 233444444444433 34444689999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
||+.+|++|||||||++||+.+...+.+.|+++. .++|||++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999999999874 47899999999999865 9999999999999999987653
No 147
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=6.5e-42 Score=414.51 Aligned_cols=235 Identities=28% Similarity=0.454 Sum_probs=203.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCc
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 82 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsG 82 (1050)
.++..+.+++++++|+.++++.++......+...+....|+++|++|+|+.. ++++|+|+||++++|++++|+|+||||
T Consensus 282 ~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsG 360 (529)
T TIGR02857 282 ADYHARADGVAAAEALFAVLDAPRPLAGKAPVTAAPAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAG 360 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCCCcCCCCCCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCC
Confidence 4677888999999999999985532111111111112359999999999743 357999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcHHH
Q 001580 83 KTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHD 149 (1050)
Q Consensus 83 KSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~~~ 149 (1050)
||||+++|+|+++|++|.+.. +++.|+||+|+|++|++||+||+.++.+ .++++..++++.+++.+.
T Consensus 361 KSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~ 440 (529)
T TIGR02857 361 KSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEF 440 (529)
T ss_pred HHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHH
Confidence 999999999999999886542 2346999999999999999999999854 466788899999999999
Q ss_pred HhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcch
Q 001580 150 LDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHF 229 (1050)
Q Consensus 150 ~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~ 229 (1050)
++.+|+|++|.+|++|.+||||||||++|||||+++|+++|||||||+||+++++.+++.+.+. .+++|+|+|||+++.
T Consensus 441 i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~-~~~~t~i~itH~~~~ 519 (529)
T TIGR02857 441 VAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEALRAL-AQGRTVLLVTHRLAL 519 (529)
T ss_pred HHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHh-cCCCEEEEEecCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999987654 368999999999999
Q ss_pred hhhcCEEEEE
Q 001580 230 LSQVDRIILV 239 (1050)
Q Consensus 230 l~~~d~i~~l 239 (1050)
+..||+|++|
T Consensus 520 ~~~~d~i~~l 529 (529)
T TIGR02857 520 AERADRIVVL 529 (529)
T ss_pred HHhCCEEEeC
Confidence 9999999875
No 148
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-42 Score=365.59 Aligned_cols=206 Identities=27% Similarity=0.442 Sum_probs=177.7
Q ss_pred cEEEEeEEEEeCCC--CCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------
Q 001580 41 AISIRNGYFSWDSK--AERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 103 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~--~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------- 103 (1050)
+|+++++++.|... +..++|+||||+|++||+.||+|.||||||||++++.++..|++|.+..
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 48999999999853 1246999999999999999999999999999999999999999987653
Q ss_pred EeCcEEEEecCCCCC-cccHHHHhccCCCC----CH---HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHH
Q 001580 104 IRGTVAYVPQVSWIF-NATVRDNILFGSAF----EP---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 175 (1050)
Q Consensus 104 ~~~~i~~v~Q~~~l~-~~TV~eni~~g~~~----~~---~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqR 175 (1050)
.|+.||+++|++.|+ +.||++||.|.... +. .++.+.++..+|.+..+..| .+||||||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQR 149 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQR 149 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhH
Confidence 244699999999987 68999999997432 12 23444566667776665555 5999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhh
Q 001580 176 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 253 (1050)
Q Consensus 176 v~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 253 (1050)
|+|||||+.+|+|||+|||||+|||++.+.|.+.|.+..+ .|.|+++|||.++.++. |||+.+|++|+++++|+..++
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 9999999999999999999999999999999998877654 59999999999999986 899999999999999999998
Q ss_pred hcCh
Q 001580 254 SNNG 257 (1050)
Q Consensus 254 ~~~~ 257 (1050)
+.++
T Consensus 230 F~~P 233 (339)
T COG1135 230 FANP 233 (339)
T ss_pred hcCc
Confidence 8764
No 149
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=371.33 Aligned_cols=217 Identities=24% Similarity=0.421 Sum_probs=185.4
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc---CCccEEEECCeecCCCChHHHhhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDLRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~---p~~G~i~~~g~~i~~~~~~~~r~~ 742 (1050)
++++|+++.|++ +++|+|+||+|.+||++||+||||||||||+++|+|+++ |++|+|.++|.++...+...+|+.
T Consensus 3 ~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 80 (246)
T PRK14269 3 AKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKN 80 (246)
T ss_pred eeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhh
Confidence 789999999964 369999999999999999999999999999999999984 689999999999988777778889
Q ss_pred eEEEcCCcccccccHHHhcccCCC---C------CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 001580 743 LGIIPQSPVLFSGTVRFNLDPFSE---H------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 743 i~~v~Q~~~lf~~tv~~nl~~~~~---~------~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~l 813 (1050)
++|+||++.+|..|+++|+.+... . .++++.++++..++.+++. ......+.+||||||||++|
T Consensus 81 i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~qrv~l 153 (246)
T PRK14269 81 VGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVK-------DKLKQNALALSGGQQQRLCI 153 (246)
T ss_pred EEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhh-------HHhcCCcccCCHHHHHHHHH
Confidence 999999999998999999975321 0 1112334444444432221 23455667899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 891 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 891 (1050)
||||+++|+||||||||++||+.++..+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|+++++....
T Consensus 154 aral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 154 ARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 99999999999999999999999999999999987778999999999999876 9999999999999999999987643
No 150
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-41 Score=369.76 Aligned_cols=215 Identities=26% Similarity=0.415 Sum_probs=180.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999965 369999999999999999999999999999999999999999999999999876543 3568999
Q ss_pred EcCCccccc-ccHHHhcccCCCC-------CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVLFS-GTVRFNLDPFSEH-------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~~~-------~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+||++.+|. .|+++|+.+.... ...+.. ..+.++++.+ |++........+||||||||++|||||
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al 151 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALARAL 151 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHH
Confidence 999999886 5999999753211 111111 1123334432 454555566678999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 891 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 891 (1050)
+.+|++|||||||++||+.+++.+.+.|+++.+ ++|||++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 228 (239)
T cd03296 152 AVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDHP 228 (239)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcCC
Confidence 999999999999999999999999999998653 7899999999999876 9999999999999999999987543
No 151
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=6e-42 Score=389.81 Aligned_cols=217 Identities=24% Similarity=0.403 Sum_probs=185.6
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCc--cEEEECCeecCCCChHHHhh
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER--GRILIDGFDIAKFGLMDLRK 741 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~--G~i~~~g~~i~~~~~~~~r~ 741 (1050)
+.++++||+++|+.. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...++ .++
T Consensus 4 ~~l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~r 79 (362)
T TIGR03258 4 GGIRIDHLRVAYGAN--TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HKR 79 (362)
T ss_pred eEEEEEEEEEEECCe--EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HHC
Confidence 459999999999743 69999999999999999999999999999999999999999 999999999987665 457
Q ss_pred heEEEcCCcccccc-cHHHhcccCC---CCCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 001580 742 ILGIIPQSPVLFSG-TVRFNLDPFS---EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 742 ~i~~v~Q~~~lf~~-tv~~nl~~~~---~~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~l 813 (1050)
.||||+|++.+|.. ||++|+.+.. ..... ++.++++.. |++........+|||||||||+|
T Consensus 80 ~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~-----------gL~~~~~~~~~~LSgGq~QRvaL 148 (362)
T TIGR03258 80 GLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLV-----------GLGDAAAHLPAQLSGGMQQRIAI 148 (362)
T ss_pred CEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc-----------CCCchhhCChhhCCHHHHHHHHH
Confidence 89999999999966 9999997532 11222 233333333 44444555667899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC---CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK---SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~---~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
||||+.+|++|||||||++||+.++..+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|+++++..
T Consensus 149 ARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~ 228 (362)
T TIGR03258 149 ARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYD 228 (362)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999988653 6899999999999876 99999999999999999999987
Q ss_pred cCCChH
Q 001580 890 NEGSSF 895 (1050)
Q Consensus 890 ~~~~~~ 895 (1050)
++...|
T Consensus 229 ~p~~~~ 234 (362)
T TIGR03258 229 APADGF 234 (362)
T ss_pred CcCcHH
Confidence 654433
No 152
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.5e-42 Score=368.13 Aligned_cols=202 Identities=29% Similarity=0.426 Sum_probs=170.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH---HHhhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~---~~r~~ 742 (1050)
++++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|+.
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999964323699999999999999999999999999999999999999999999999998766543 36788
Q ss_pred eEEEcCCcccccc-cHHHhcccCC---CC----CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 743 LGIIPQSPVLFSG-TVRFNLDPFS---EH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 743 i~~v~Q~~~lf~~-tv~~nl~~~~---~~----~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
++|+||++.+|.. |+++|+.+.. .. .++++.++++..++. ........+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLE-----------GKAHALPMQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhhCChhhCCHHHHHHHHHH
Confidence 9999999998864 9999996421 11 122344444444443 334444568999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEE
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 878 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 878 (1050)
|||+.+|++|||||||++||+.+++.+.+.|+++. .++|+|+|||+++++.. ||++++|++|++
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999864 47899999999999976 999999999975
No 153
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=378.67 Aligned_cols=218 Identities=29% Similarity=0.490 Sum_probs=182.4
Q ss_pred EEEEEEEEEeCCCC---CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCC--hHHHh
Q 001580 666 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG--LMDLR 740 (1050)
Q Consensus 666 i~~~~v~~~y~~~~---~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~--~~~~r 740 (1050)
++++||+++|++.. .++|+||||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...++
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999996421 36999999999999999999999999999999999999999999999999997643 35678
Q ss_pred hheEEEcCCc--ccccccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcc--hhhhcCCCCCChhHHHHHHH
Q 001580 741 KILGIIPQSP--VLFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLD--AQVSEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 741 ~~i~~v~Q~~--~lf~~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~--t~v~~~~~~LSgGq~qrl~l 813 (1050)
++|||+||+| .+|..|+++|+.+... .+..+..+. +.+.++. .|+. +.....+..||||||||++|
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~--~gL~~~~~~~~~~~~LSgGq~qrv~i 155 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNI--VGLDYEDYKDKSPFELSGGQKRRVAI 155 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHH--cCCCchhhccCCcccCCHHHHHHHHH
Confidence 8999999998 4678899999975321 222222111 1223333 2443 44566678899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
||||+.+|++|||||||++||+.+...+++.|+++.+ +.|||+|||+++++.. ||||++|++|++++.|+++++...
T Consensus 156 AraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 156 AGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999998753 7899999999999865 999999999999999999998653
No 154
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.1e-41 Score=366.83 Aligned_cols=216 Identities=34% Similarity=0.548 Sum_probs=192.7
Q ss_pred CccEEEEEEEEEeCCC-CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhh
Q 001580 663 SGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK 741 (1050)
Q Consensus 663 ~~~i~~~~v~~~y~~~-~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~ 741 (1050)
.+.++++|++++|++. ..++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 3569999999999642 236999999999999999999999999999999999999999999999999988777777788
Q ss_pred heEEEcCCcccccccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 742 ILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 742 ~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
.++|+||++.+|..|+++|+.+... ....++.+..+..++.++++.+|.|+++.+.....+||||||||++|||||+++
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 8999999999998899999975432 233344455556677889999988999989999999999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEE
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRV 878 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i 878 (1050)
|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++++..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999999997777899999999999977999999999974
No 155
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=387.26 Aligned_cols=213 Identities=23% Similarity=0.397 Sum_probs=183.0
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++|++++|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++ .++.|+|
T Consensus 3 L~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~~ 78 (353)
T PRK10851 3 IEIANIKKSFGRT--QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVGF 78 (353)
T ss_pred EEEEEEEEEeCCe--EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEEE
Confidence 7899999999753 69999999999999999999999999999999999999999999999999987654 4578999
Q ss_pred EcCCcccccc-cHHHhcccCCC-------CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSE-------HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~-------~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~l 813 (1050)
+||++.+|.. |+++|+.+... ... +++.++++..+ +.........+||||||||++|
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------L~~~~~~~~~~LSgGq~QRval 147 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQ-----------LAHLADRYPAQLSGGQKQRVAL 147 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcC-----------CchhhhCChhhCCHHHHHHHHH
Confidence 9999999975 99999975421 111 22333444443 4444455567899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
||||+.+|++|||||||++||+.++..+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|+++++..+
T Consensus 148 ArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 148 ARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999999999998654 6899999999999877 999999999999999999999876
Q ss_pred CCC
Q 001580 891 EGS 893 (1050)
Q Consensus 891 ~~~ 893 (1050)
+..
T Consensus 228 p~~ 230 (353)
T PRK10851 228 PAT 230 (353)
T ss_pred ccc
Confidence 543
No 156
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=7.8e-42 Score=392.08 Aligned_cols=212 Identities=26% Similarity=0.433 Sum_probs=185.7
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...++++|||
T Consensus 4 L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~ 81 (402)
T PRK09536 4 IDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVAS 81 (402)
T ss_pred EEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEE
Confidence 899999999974 379999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EcCCccc-ccccHHHhcccCCC-----C------CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 001580 746 IPQSPVL-FSGTVRFNLDPFSE-----H------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 746 v~Q~~~l-f~~tv~~nl~~~~~-----~------~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~l 813 (1050)
+||++.+ |+.|+++|+.+... . ..+.+.++++..++.++. .....+||||||||++|
T Consensus 82 v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-----------~~~~~~LSgGerQRv~I 150 (402)
T PRK09536 82 VPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-----------DRPVTSLSGGERQRVLL 150 (402)
T ss_pred EccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHH
Confidence 9999987 56799999865321 1 122345555555554433 34456899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
||||+++|+||||||||++||+.++..+++.|+++. .++|||++||+++++.. |||+++|++|++++.|++++++..
T Consensus 151 ArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 151 ARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 999999999999999999999999999999999875 47899999999999976 999999999999999999998753
No 157
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-41 Score=347.78 Aligned_cols=221 Identities=27% Similarity=0.432 Sum_probs=190.7
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH-hhhe
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~-r~~i 743 (1050)
.++++|++..|+.. ++|++|||++++||+++|+||||||||||+++|+|+.+|.+|+|.++|.||+..+++.. |..|
T Consensus 3 mL~v~~l~~~YG~~--~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGKI--QALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccce--eEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 38999999999763 79999999999999999999999999999999999999999999999999999998874 6679
Q ss_pred EEEcCCcccccc-cHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
+||||...+|.. ||.|||..+...... +......+++..+.|| -+....+..+.+|||||||.++|||||+.+|+
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~---~~~~~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRD---KEAQERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccc---cccccccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 999999999976 999999754221110 0000111344455566 46667778888999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 891 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 891 (1050)
+|+|||||.||-|.-.+.|.+.|+++.+ +.||++|-++...+.. +||.+||++|+|+..|+.+||.+++
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 9999999999999999999999999874 5699999999999766 9999999999999999999998764
No 158
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.4e-42 Score=389.54 Aligned_cols=205 Identities=29% Similarity=0.446 Sum_probs=177.4
Q ss_pred CceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH----hhheEEEcCCcccccc-
Q 001580 681 PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL----RKILGIIPQSPVLFSG- 755 (1050)
Q Consensus 681 ~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~----r~~i~~v~Q~~~lf~~- 755 (1050)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++..+ |+.|+||||++.+|..
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 69999999999999999999999999999999999999999999999999999888777 7789999999999975
Q ss_pred cHHHhcccCCC---CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 001580 756 TVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDE 828 (1050)
Q Consensus 756 tv~~nl~~~~~---~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDE 828 (1050)
||++|+.+... ... +++.++++.+ |++...+..+.+|||||||||+|||||+.+|+||||||
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~v-----------gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLV-----------GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc-----------CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99999975321 111 2233444443 44455566667899999999999999999999999999
Q ss_pred cCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHH
Q 001580 829 ATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 896 (1050)
Q Consensus 829 pts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 896 (1050)
||++||+.+++.+++.+.++. .++|+|+|||+++++.. ||+|++|++|++++.|++++++.++...|.
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~ 226 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYV 226 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHH
Confidence 999999999999999998864 37999999999999766 999999999999999999999876544443
No 159
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-42 Score=371.70 Aligned_cols=220 Identities=29% Similarity=0.446 Sum_probs=180.5
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCC---hHHHhhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG---LMDLRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~---~~~~r~~ 742 (1050)
++++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4689999999642 36999999999999999999999999999999999999999999999999998766 3457788
Q ss_pred eEEEcCCccccc-ccHHHhcccCCCCCHH---HH---HHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 743 LGIIPQSPVLFS-GTVRFNLDPFSEHSDA---DL---WEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 743 i~~v~Q~~~lf~-~tv~~nl~~~~~~~~~---~~---~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
++|+||++.+|. .|+++|+.+....... .+ ........+.+.++. .|+.......+.+||||||||++|||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~l~~~~~~~~~~LS~G~~qrv~la~ 157 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALER--VGLLDKAYQRADQLSGGQQQRVAIAR 157 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHH--cCChhhhCCCcccCCHHHHHHHHHHH
Confidence 999999998886 5999999642110000 00 000001112333443 24555566677899999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
||+.+|+||||||||++||+.++..+.+.|+++. .++|||++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 158 ALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 9999999999999999999999999999999865 37899999999999986 9999999999999999998874
No 160
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=9e-42 Score=370.17 Aligned_cols=220 Identities=28% Similarity=0.470 Sum_probs=184.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH-hhheE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 744 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~-r~~i~ 744 (1050)
++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 468999999964 369999999999999999999999999999999999999999999999999988776554 56799
Q ss_pred EEcCCcccccc-cHHHhcccCCCCC-HHHH-------HHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSEHS-DADL-------WEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~~~-~~~~-------~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
|+||++.+|.. |+++|+.+..... ...+ ........+.++++.+ |++...+....+||||||||++|||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 156 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIAR 156 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHHH
Confidence 99999999876 9999986432110 0000 0000112234455553 6666667777899999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
||+.+|++|||||||++||+.+++.+++.|+++. .++|+|++||+++++.. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 157 ALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 9999999999999999999999999999999865 57899999999999977 99999999999999999998865
No 161
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=8.6e-42 Score=366.25 Aligned_cols=214 Identities=26% Similarity=0.435 Sum_probs=178.0
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++||++.|++...++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...++++++|
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEEE
Confidence 478999999964223699999999999999999999999999999999999999999999999998754 3567788999
Q ss_pred EcCCccccc-ccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.+|. .|+++|+.+.. .....+.. ..+.++++.+ |+.........+||||||||++||||++.+|
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 152 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIK-----EEVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGGP 152 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcCC
Confidence 999999884 69999986421 11111111 1122333332 3444444555789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 887 (1050)
++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 153 SVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 999999999999999999999999997777999999999999976 999999999999999998875
No 162
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=9.5e-42 Score=385.81 Aligned_cols=216 Identities=27% Similarity=0.460 Sum_probs=183.3
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.|+++|++++|++. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|+.||
T Consensus 41 ~i~i~nl~k~y~~~--~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGDK--AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 49999999999743 6999999999999999999999999999999999999999999999999987644 46788999
Q ss_pred EEcCCccccc-ccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 745 IIPQSPVLFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 745 ~v~Q~~~lf~-~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
|+||++.++. .|+.+|+.++.. ....+..+. +.++++. .|+.........+||||||||++|||||+++
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~--~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~ 190 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEF--ARLESKADARVSDLSGGMKRRLTLARALIND 190 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHH--cCCchhhCCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998875 599999975321 121111111 2233333 3454455556678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|++|||||||+|||+.++..+++.|+++. .|+|||++||+++++.. ||+|++|++|+++..|+++++...
T Consensus 191 P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 191 PQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999999875 47999999999999977 999999999999999999999764
No 163
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=376.67 Aligned_cols=215 Identities=28% Similarity=0.451 Sum_probs=184.5
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++||+++|+...+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 38999999999643346999999999999999999999999999999999999999999999999998877777888999
Q ss_pred EEcCCc--ccccccHHHhcccCCC---CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 745 IIPQSP--VLFSGTVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 745 ~v~Q~~--~lf~~tv~~nl~~~~~---~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
|+||++ .++..|+.+|+.+... ... +++.++++..++.+ ........||||||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMED-----------FLNREPHRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChh-----------hhhCCcccCCHHHHHHHHHHH
Confidence 999998 4556799999975321 122 22344444444444 444455689999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
||+.+|+||||||||+|||+.+...+.+.|+++.+ ++|||++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998753 7899999999999878999999999999999999988753
No 164
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-42 Score=364.83 Aligned_cols=206 Identities=26% Similarity=0.448 Sum_probs=171.2
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 468999999964 369999999999999999999999999999999999999999999999999876543 4678999
Q ss_pred EcCCccccc-ccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.+|. .|+++|+.+... ....... ..+.++++. .|++........+||||||||++|||||+.+|
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~--~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p 149 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIR-----ARVRELLEL--VGLEGLLNRYPHELSGGQQQRVALARALAREP 149 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHH--cCChhhhhcChhhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 599999964311 1111111 112233333 24445555556789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
++|||||||++||+.++..+++.|+++. .++|||++||+++++.. ||+|++|++|++++.|
T Consensus 150 ~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 150 SLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999864 37899999999999876 9999999999998765
No 165
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=378.49 Aligned_cols=217 Identities=23% Similarity=0.396 Sum_probs=181.2
Q ss_pred EEEEEEEEEeCCCC---CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC----CChHH
Q 001580 666 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK----FGLMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~~---~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~----~~~~~ 738 (1050)
|+++||+|+|+... +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999996432 259999999999999999999999999999999999999999999999999863 23456
Q ss_pred HhhheEEEcCCc--ccccccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHH
Q 001580 739 LRKILGIIPQSP--VLFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 739 ~r~~i~~v~Q~~--~lf~~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~qrl~ 812 (1050)
+|+.+||++|+| .+|..|+.+|+.+... ....+..+ .+.+.++.+ |+. ........+||||||||++
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrva 154 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMV--GLADEFWEKSPFELSGGQMRRVA 154 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhccCCcccCCHHHHHHHH
Confidence 788999999998 6888899999975421 12222111 122333332 442 2345666789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||+.+|+||||||||++||+.++..+.+.|+++. .++|||++||+++.+.. ||||++|++|++++.|+++++..
T Consensus 155 iA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 155 IAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 9999999999999999999999999999999998865 47899999999999865 99999999999999999999865
No 166
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-41 Score=387.68 Aligned_cols=216 Identities=24% Similarity=0.405 Sum_probs=185.6
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++. ++.+|
T Consensus 14 ~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 89 (375)
T PRK09452 14 LVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHVN 89 (375)
T ss_pred eEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999964 3699999999999999999999999999999999999999999999999999877653 57899
Q ss_pred EEcCCcccccc-cHHHhcccCCC---CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~---~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
|+||++.+|.. ||++|+.+... ... +++.++++..++.+++. ....+|||||||||+||||
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~p~~LSgGq~QRVaLARa 158 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQ-----------RKPHQLSGGQQQRVAIARA 158 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHHHHHH
Confidence 99999999966 99999975321 122 23444455555544444 4456899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 893 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 893 (1050)
|+.+|++|||||||++||+.++..+.+.|+++.+ +.|+|+||||++++.. ||+|++|++|+|++.|+++++..++..
T Consensus 159 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~~ 238 (375)
T PRK09452 159 VVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPKN 238 (375)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999999998653 7899999999999866 999999999999999999999876543
Q ss_pred hH
Q 001580 894 SF 895 (1050)
Q Consensus 894 ~~ 895 (1050)
.|
T Consensus 239 ~~ 240 (375)
T PRK09452 239 LF 240 (375)
T ss_pred HH
Confidence 33
No 167
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=357.77 Aligned_cols=204 Identities=30% Similarity=0.514 Sum_probs=175.0
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEEe---------CcEEE
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIR---------GTVAY 110 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~~---------~~i~~ 110 (1050)
+.|+++|++|+|.++ ++|+||||++++|++++|+||||||||||+|+|+|+++|.+|.+.... .+|||
T Consensus 3 ~~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgY 79 (254)
T COG1121 3 PMIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGY 79 (254)
T ss_pred cEEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEE
Confidence 469999999999742 599999999999999999999999999999999999999998876432 36999
Q ss_pred EecCC---CCCcccHHHHhccCCCCC-----------HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHH
Q 001580 111 VPQVS---WIFNATVRDNILFGSAFE-----------PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 176 (1050)
Q Consensus 111 v~Q~~---~l~~~TV~eni~~g~~~~-----------~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv 176 (1050)
|||.. |-|..||+|-+.+|.... .+++.++++..++.+..+. ...+|||||+|||
T Consensus 80 VPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-----------~i~~LSGGQ~QRV 148 (254)
T COG1121 80 VPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-----------QIGELSGGQKQRV 148 (254)
T ss_pred cCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-----------cccccCcHHHHHH
Confidence 99964 558899999999984322 2566777788777755443 3358999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 177 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 177 ~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
.|||||+++|++|+|||||+++|+.++..+++.+.++..+|+||++||||++.+.. +|+|+.|.+ ++.+.|+++++.+
T Consensus 149 ~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~-~~~~~G~~~~~~~ 227 (254)
T COG1121 149 LLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNR-HLIASGPPEEVLT 227 (254)
T ss_pred HHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcC-eeEeccChhhccC
Confidence 99999999999999999999999999999999888877779999999999998765 899999965 6788999998876
Q ss_pred ChH
Q 001580 256 NGE 258 (1050)
Q Consensus 256 ~~~ 258 (1050)
.+.
T Consensus 228 ~~~ 230 (254)
T COG1121 228 EEN 230 (254)
T ss_pred HHH
Confidence 543
No 168
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.5e-41 Score=370.20 Aligned_cols=220 Identities=28% Similarity=0.413 Sum_probs=179.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCCh---HHHhhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL---MDLRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~---~~~r~~ 742 (1050)
++++||+++|+.+ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+.
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 6899999999622 369999999999999999999999999999999999999999999999999877654 346788
Q ss_pred eEEEcCCccccc-ccHHHhcccCCCCCH---HHH---HHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 743 LGIIPQSPVLFS-GTVRFNLDPFSEHSD---ADL---WEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 743 i~~v~Q~~~lf~-~tv~~nl~~~~~~~~---~~~---~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
++|+||++.+|. .|+++|+.+...... ... ........+.++++.+ |+.......+.+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 158 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIAR 158 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHH
Confidence 999999998886 599999964211000 000 0000011223334432 5555556667889999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
||+.+|++|||||||++||+.+++.+.+.|+++. .++|+|+|||+++++.. ||++++|++|++++.|+++++.
T Consensus 159 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 159 ALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 9999999999999999999999999999999864 37899999999999866 9999999999999999998863
No 169
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.4e-41 Score=365.31 Aligned_cols=216 Identities=29% Similarity=0.455 Sum_probs=180.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH-hhheE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 744 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~-r~~i~ 744 (1050)
|+++||+++|++. ++++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGKS--QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCCe--eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 4789999999643 69999999999999999999999999999999999999999999999999987776554 56799
Q ss_pred EEcCCcccccc-cHHHhcccCCCCC-HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSEHS-DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~~~-~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
|+||++.+|.. |+++|+.+..... ..+.. ..+.+.++.++ +++........+||||||||++|||||+.+|+
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~-----~~~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p~ 152 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRK-----ARLERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRPK 152 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHH-----HHHHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999998876 9999997532211 11111 11122233321 23444556667899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
+|||||||++||+.++..+++.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 153 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 153 LLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 999999999999999999999999865 47899999999999877 99999999999999999888753
No 170
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.3e-41 Score=369.36 Aligned_cols=217 Identities=29% Similarity=0.490 Sum_probs=182.4
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCC-----ccEEEECCeecCCC--ChHH
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAKF--GLMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~-----~G~i~~~g~~i~~~--~~~~ 738 (1050)
++++||+++|++. ++++|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++... +...
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999743 6999999999999999999999999999999999999998 99999999998753 3456
Q ss_pred HhhheEEEcCCcccccccHHHhcccCC---C-CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 739 LRKILGIIPQSPVLFSGTVRFNLDPFS---E-HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~-~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
+++.++|+||++.+|..|+++|+.+.. . ... +.+.++++..++.+.+ .........+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEV-------KDRLHDSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcch-------hhHhhCCcccCCHHHHHH
Confidence 788899999999988899999996421 1 111 1223333333332111 034556677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++..
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999876 99999999999999999999875
Q ss_pred cC
Q 001580 890 NE 891 (1050)
Q Consensus 890 ~~ 891 (1050)
..
T Consensus 233 ~~ 234 (247)
T TIGR00972 233 NP 234 (247)
T ss_pred CC
Confidence 43
No 171
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-41 Score=346.98 Aligned_cols=212 Identities=29% Similarity=0.475 Sum_probs=180.7
Q ss_pred CCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------
Q 001580 39 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 103 (1050)
Q Consensus 39 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------- 103 (1050)
.+.|++++++|+|. ++.+++||||+|++||+++|+|+||||||||||+|.|+++|++|.+..
T Consensus 6 ~~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 6 EPLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred cceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 46799999999996 578999999999999999999999999999999999999999987653
Q ss_pred EeCcEEEEecCCCCC-cccHHHHhccCC----CCCHHHHH----HHHHHhCcHHH-HhcCCCCCcccccCCCCCCCHHHH
Q 001580 104 IRGTVAYVPQVSWIF-NATVRDNILFGS----AFEPARYE----KAIDVTSLQHD-LDLLPGGDVTEIGERGVNISGGQK 173 (1050)
Q Consensus 104 ~~~~i~~v~Q~~~l~-~~TV~eni~~g~----~~~~~~~~----~~~~~~~l~~~-~~~~~~g~~t~vg~~g~~LSGGqr 173 (1050)
+++++|+++|+..|| +.||+||+.|.. ...+..++ ..++.++|... .+.+| .+||||++
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~ 151 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMR 151 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHH
Confidence 345699999999999 789999999852 22333222 23667888777 77777 48999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChh
Q 001580 174 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFE 251 (1050)
Q Consensus 174 qRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 251 (1050)
+|++||||++.+|+++++||||+||||.+...+-+.+.++.. -|.|+|+||||++.+.. |||++++.+|+|+.+|+++
T Consensus 152 KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~ 231 (263)
T COG1127 152 KRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPE 231 (263)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHH
Confidence 999999999999999999999999999999988776666544 48999999999999876 5999999999999999999
Q ss_pred hhhcC-hHHHHHHH
Q 001580 252 DLSNN-GELFQKLM 264 (1050)
Q Consensus 252 ~l~~~-~~~~~~l~ 264 (1050)
++.+. .+..++.+
T Consensus 232 el~~sd~P~v~qf~ 245 (263)
T COG1127 232 ELLASDDPWVRQFF 245 (263)
T ss_pred HHHhCCCHHHHHHh
Confidence 98765 44444444
No 172
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-41 Score=368.47 Aligned_cols=217 Identities=27% Similarity=0.465 Sum_probs=183.9
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4689999999752 369999999999999999999999999999999999999999999999999988777778889999
Q ss_pred EcCCccccc-ccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcch--hhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 746 IPQSPVLFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDA--QVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t--~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
+||++.+|. .|+++|+.+... ....+. ...+.++++.+ |+.. .....+.+||||||||++|||||++
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~~ 152 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALAA 152 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHhc
Confidence 999999886 599999965311 111111 11233444443 4443 4566678899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 153 ~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 153 DPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999998753 7899999999998866 999999999999999999988654
No 173
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-41 Score=369.83 Aligned_cols=218 Identities=24% Similarity=0.393 Sum_probs=183.2
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~--~~~~ 737 (1050)
.|+++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGDF--QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECCe--eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 49999999999643 69999999999999999999999999999999999975 689999999999864 3345
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCC---CC-C----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~-~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+|+.++|+||++.+|..|+++|+.+.. .. . .+++.++++.+++.+.+ ....+....+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-------KDRLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHHHHH
Confidence 6788999999999999889999996421 11 1 12334444444443221 22345667789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|||++||+++++.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998667899999999999876 9999999999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
...
T Consensus 237 ~~~ 239 (253)
T PRK14242 237 TRP 239 (253)
T ss_pred cCC
Confidence 643
No 174
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.8e-41 Score=379.82 Aligned_cols=215 Identities=24% Similarity=0.406 Sum_probs=185.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|+++||
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999964 369999999999999999999999999999999999999999999999999876 44567889999
Q ss_pred EcCCcccccc-cHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.+|.. |+.+|+.+... ....+..+ .+.+.++.+ |++.........||||||||++|||||+++|
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~p 152 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHDP 152 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcCC
Confidence 9999999876 99999974321 11111111 123334443 5666666777889999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
++|||||||+|||+.+++.+++.|+++.+++|||++||+++++.. ||||++|++|++++.|+++++.+.
T Consensus 153 ~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 153 KVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 999999999999999999999999998778999999999999987 999999999999999999998764
No 175
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-41 Score=388.44 Aligned_cols=212 Identities=22% Similarity=0.341 Sum_probs=182.2
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++ .++.|+|
T Consensus 4 l~i~~l~~~~~~~--~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i~~ 79 (369)
T PRK11000 4 VTLRNVTKAYGDV--VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGVGM 79 (369)
T ss_pred EEEEEEEEEeCCe--EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCEEE
Confidence 8999999999643 69999999999999999999999999999999999999999999999999987665 3567999
Q ss_pred EcCCcccccc-cHHHhcccCCC---CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~---~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+||++.+|.. |+++|+.+... ... +++.++++.. |++........+|||||||||+|||||
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~l-----------gL~~~~~~~~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVL-----------QLAHLLDRKPKALSGGQRQRVAIGRTL 148 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHc-----------CChhhhcCChhhCCHHHHHHHHHHHHH
Confidence 9999999965 99999975321 111 2233344443 444444555578999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 892 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 892 (1050)
+.+|++|||||||++||+.+++.+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|+++++...+.
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~ 226 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPA 226 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 999999999999999999999999999988643 7899999999999876 99999999999999999999987654
No 176
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-41 Score=366.87 Aligned_cols=217 Identities=28% Similarity=0.455 Sum_probs=181.1
Q ss_pred EEEEEEEEEeCCC--CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---Hh
Q 001580 666 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LR 740 (1050)
Q Consensus 666 i~~~~v~~~y~~~--~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~r 740 (1050)
|+++|++++|++. ..++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999643 126999999999999999999999999999999999999999999999999988765443 47
Q ss_pred hheEEEcCCccccc-ccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 741 KILGIIPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 741 ~~i~~v~Q~~~lf~-~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
+.++|+||++.+|. .|+++|+.+.. ........ ..+.++++.+ |++........+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~a 154 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIE-----ERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARA 154 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 78999999999987 59999986421 11111111 1123344442 45555555667899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|++||+++++.. ||++++|++|++++.|+++++.+
T Consensus 155 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 155 LANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999998653 7899999999999876 99999999999999999988864
No 177
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-41 Score=364.34 Aligned_cols=208 Identities=28% Similarity=0.453 Sum_probs=176.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++|++++|++. ++|+|+||++.+||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....++++++|
T Consensus 1 i~~~~~~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~-~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGDF--EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVR-EPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECCE--EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCc-ChHHHhhcEEE
Confidence 4789999999643 69999999999999999999999999999999999999999999999998865 33566788999
Q ss_pred EcCCcccccc-cHHHhcccCC---CCC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~---~~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+||++.++.. |+++|+.+.. ... ++++.++++..++ +........+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGL-----------LEAADRLVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------HHHhhCChhhCCHHHHHHHHHHHHH
Confidence 9999988875 9999986421 111 1223344444444 3334444568999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 887 (1050)
+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++++.. ||++++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999988653 7899999999999877 999999999999999988775
No 178
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-41 Score=369.04 Aligned_cols=219 Identities=25% Similarity=0.405 Sum_probs=183.6
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~--~~~~ 737 (1050)
.++++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .+..
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 4999999999964 3699999999999999999999999999999999999997 48999999998853 2345
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC----CC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE----HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~----~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+|+.++|+||++.+|..|+++|+.+... .. ++.+.++++.+++.+.+ .......+.+|||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgG~~q 157 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV-------KDKLNTNALSLSGGQQQ 157 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh-------HHHHhCCcccCCHHHHH
Confidence 67888999999999888899999975321 11 12234444444432211 22334556789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+.+|++|||||||++||+.+...+++.|+++.+++|+|++||+++++.. ||||++|++|++++.|+++++.
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998767899999999999876 9999999999999999999997
Q ss_pred hcCC
Q 001580 889 SNEG 892 (1050)
Q Consensus 889 ~~~~ 892 (1050)
..+.
T Consensus 238 ~~~~ 241 (254)
T PRK14273 238 FNPK 241 (254)
T ss_pred hCCC
Confidence 6543
No 179
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-41 Score=353.83 Aligned_cols=189 Identities=29% Similarity=0.418 Sum_probs=165.5
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------eCcEEEEe
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------RGTVAYVP 112 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------~~~i~~v~ 112 (1050)
..+++++++++|+. ..+|+|+||+|++||+++|+||||||||||||+|+|+.+|++|.+..- ...+|||+
T Consensus 2 ~~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vF 78 (248)
T COG1116 2 ALLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVF 78 (248)
T ss_pred ceEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEe
Confidence 35899999999974 579999999999999999999999999999999999999998876542 22599999
Q ss_pred cCCCCCc-ccHHHHhccCCCCC-------HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHcc
Q 001580 113 QVSWIFN-ATVRDNILFGSAFE-------PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYS 184 (1050)
Q Consensus 113 Q~~~l~~-~TV~eni~~g~~~~-------~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~ 184 (1050)
|++.|+. .||+|||.|+.... .++..+.++..+|....+.+| .+|||||||||+|||||+.
T Consensus 79 Q~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiARAL~~ 147 (248)
T COG1116 79 QEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIARALAT 147 (248)
T ss_pred ccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHHHHhc
Confidence 9999875 79999999985431 234566788888888888877 4899999999999999999
Q ss_pred CCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCC
Q 001580 185 NSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEG 242 (1050)
Q Consensus 185 ~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G 242 (1050)
+|+||+|||||++||+.++..+.+.+.+.+. .++|+|+||||.+++-. +|||++|.++
T Consensus 148 ~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 148 RPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred CCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999998888654 58999999999998754 7999999984
No 180
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=375.39 Aligned_cols=218 Identities=22% Similarity=0.407 Sum_probs=184.0
Q ss_pred EEEEEEEEEeCCCC---CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCC----ChHH
Q 001580 666 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~~---~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~----~~~~ 738 (1050)
++++||+++|+++. +++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996421 3699999999999999999999999999999999999999999999999998653 2356
Q ss_pred HhhheEEEcCCc--ccccccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcch-hhhcCCCCCChhHHHHHH
Q 001580 739 LRKILGIIPQSP--VLFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDA-QVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 739 ~r~~i~~v~Q~~--~lf~~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t-~v~~~~~~LSgGq~qrl~ 812 (1050)
+|++||||||+| .+|..|+.+|+.+... .+..+..+ .+.++++. .|+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~--~gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKN-----YAHRLLMD--LGFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHH--cCCChhhhhCCcccCCHHHHHHHH
Confidence 788999999997 5787899999975321 12222221 12334444 46763 456678899999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||+.+|+||||||||++||+.+...+.+.|+++. .++|||+|||+++++.. ||||++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999864 37999999999999865 99999999999999999999875
Q ss_pred c
Q 001580 890 N 890 (1050)
Q Consensus 890 ~ 890 (1050)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 3
No 181
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-41 Score=368.17 Aligned_cols=219 Identities=25% Similarity=0.397 Sum_probs=184.8
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCC--CCh
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGL 736 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~--~~~ 736 (1050)
+.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 12 ~~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~ 89 (260)
T PRK10744 12 SKIQVRNLNFYYGKF--HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDI 89 (260)
T ss_pred ceEEEEEEEEEeCCe--EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccch
Confidence 459999999999643 69999999999999999999999999999999999986 589999999999853 345
Q ss_pred HHHhhheEEEcCCcccccccHHHhcccCC----CCCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHH
Q 001580 737 MDLRKILGIIPQSPVLFSGTVRFNLDPFS----EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 808 (1050)
Q Consensus 737 ~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~----~~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~ 808 (1050)
..+|++++|+||++.+|..|+++|+.+.. ..+. +++.++++..++.. ++....+....+||||||
T Consensus 90 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~ 162 (260)
T PRK10744 90 ALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWN-------EVKDKLHQSGYSLSGGQQ 162 (260)
T ss_pred HHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCCh-------hhHHHHhcCCCCCCHHHH
Confidence 56788999999999998899999997531 1121 22334444433321 123445666788999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 001580 809 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 809 qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 887 (1050)
||++|||||+.+|+||||||||++||+.+++.+.+.|+++.++.|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 163 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (260)
T PRK10744 163 QRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTI 242 (260)
T ss_pred HHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998667899999999999876 999999999999999999998
Q ss_pred hhcC
Q 001580 888 LSNE 891 (1050)
Q Consensus 888 ~~~~ 891 (1050)
....
T Consensus 243 ~~~~ 246 (260)
T PRK10744 243 FTKP 246 (260)
T ss_pred HhCC
Confidence 7643
No 182
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-42 Score=351.89 Aligned_cols=220 Identities=27% Similarity=0.443 Sum_probs=191.2
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH-hhheE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 744 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~-r~~i~ 744 (1050)
+++++++++|++- .+++||||++++||++||+|||||||||++|+|+|+|+|++|+|.++|.||..++++.. |..|+
T Consensus 5 L~v~~l~k~FGGl--~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGGL--TAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCCE--EEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 7899999999753 79999999999999999999999999999999999999999999999999999999875 55699
Q ss_pred EEcCCcccccc-cHHHhcccCCC------------CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE------------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 811 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~------------~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl 811 (1050)
--+|.+.+|.+ ||.||+..... ....+..++.+ .+.++++. .|++...++...+||+|||+||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e--~A~~~Le~--vgL~~~a~~~A~~LsyG~qR~L 158 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARE--RARELLEF--VGLGELADRPAGNLSYGQQRRL 158 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHH--HHHHHHHH--cCCchhhcchhhcCChhHhHHH
Confidence 99999999976 99999853211 00011122222 23445555 4788888888899999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 812 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 812 ~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
.|||||+.+|++||||||.+||.+.....+.+.|+++.+ +.|+++|.|||+.+.. ||||+||+.|+++++|+|+|+.
T Consensus 159 EIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV~ 238 (250)
T COG0411 159 EIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEVR 238 (250)
T ss_pred HHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHHh
Confidence 999999999999999999999999999999999999874 4899999999999988 9999999999999999999998
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
+++
T Consensus 239 ~dp 241 (250)
T COG0411 239 NNP 241 (250)
T ss_pred cCH
Confidence 764
No 183
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-41 Score=377.30 Aligned_cols=218 Identities=22% Similarity=0.347 Sum_probs=179.9
Q ss_pred EEEEEEEEEeCCCC---CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC---------
Q 001580 666 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK--------- 733 (1050)
Q Consensus 666 i~~~~v~~~y~~~~---~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~--------- 733 (1050)
|+++||+++|++.. .++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999996432 259999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CChHHHhhheEEEcCCc--ccccccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcc
Q 001580 734 ---------------FGLMDLRKILGIIPQSP--VLFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLD 793 (1050)
Q Consensus 734 ---------------~~~~~~r~~i~~v~Q~~--~lf~~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~ 793 (1050)
.+...+|+.||||||+| .+|..||++||.+... ...++..+ .+.+.++. .|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~--~gL~ 155 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKK-----RAAKYIEL--VGLD 155 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHH--cCCC
Confidence 13456788999999986 5777899999975421 22222211 11223333 2443
Q ss_pred -hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEE
Q 001580 794 -AQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRI 870 (1050)
Q Consensus 794 -t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i 870 (1050)
........+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .++|||+|||+++.+.. ||||
T Consensus 156 ~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv 235 (305)
T PRK13651 156 ESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRT 235 (305)
T ss_pred hhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEE
Confidence 34556667899999999999999999999999999999999999999999998864 47999999999998866 9999
Q ss_pred EEEeCCEEEEecChhHHhhc
Q 001580 871 LLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 871 ~vl~~G~i~~~g~~~el~~~ 890 (1050)
++|++|++++.|+++++.+.
T Consensus 236 ~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 236 IFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEECCEEEEECCHHHHhcC
Confidence 99999999999999998754
No 184
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-41 Score=375.27 Aligned_cols=218 Identities=28% Similarity=0.409 Sum_probs=181.4
Q ss_pred EEEEEEEEEeCCCC---CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC----CChHH
Q 001580 666 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK----FGLMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~~---~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~----~~~~~ 738 (1050)
++++|++++|++.. .++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996421 369999999999999999999999999999999999999999999999999863 23456
Q ss_pred HhhheEEEcCCc--ccccccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHH
Q 001580 739 LRKILGIIPQSP--VLFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 739 ~r~~i~~v~Q~~--~lf~~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~qrl~ 812 (1050)
.|+.||||||+| .+|..|+++|+.+... .+..+..+ .+.+.++. .|++ ......+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~--~gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQ-----KAREMIEL--VGLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHH--CCCChhhhhCCcccCCHHHHHHHH
Confidence 788899999998 5777899999975321 12222211 12233333 2453 2345566789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||+.+|++|||||||++||+.+...+.+.|+++.+ +.|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999875
Q ss_pred c
Q 001580 890 N 890 (1050)
Q Consensus 890 ~ 890 (1050)
.
T Consensus 236 ~ 236 (290)
T PRK13634 236 D 236 (290)
T ss_pred C
Confidence 3
No 185
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-41 Score=367.66 Aligned_cols=217 Identities=28% Similarity=0.446 Sum_probs=183.2
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCCCChHHHh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFGLMDLR 740 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~~~~~~~r 740 (1050)
++++||+++|++. ++++|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+...+|
T Consensus 4 l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 81 (250)
T PRK14247 4 IEIRDLKVSFGQV--EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELR 81 (250)
T ss_pred EEEEeeEEEECCe--eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHh
Confidence 8999999999653 699999999999999999999999999999999999974 699999999999887777888
Q ss_pred hheEEEcCCcccc-cccHHHhcccCCC-----CC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 741 KILGIIPQSPVLF-SGTVRFNLDPFSE-----HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 741 ~~i~~v~Q~~~lf-~~tv~~nl~~~~~-----~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
+.|+|+||++.+| ..|+++|+.+... .. .+++.++++..++.+.+ .........+||||||||
T Consensus 82 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~qr 154 (250)
T PRK14247 82 RRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEV-------KDRLDAPAGKLSGGQQQR 154 (250)
T ss_pred ccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCCcccCCHHHHHH
Confidence 8999999999765 5699999964211 01 12233444444332211 123445567899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
++|||||+.+|+||||||||++||+.++..+.+.|+++.+++|+|++||+++++.. ||+|++|++|++++.|+++++.+
T Consensus 155 v~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14247 155 LCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHc
Confidence 99999999999999999999999999999999999997678999999999999865 99999999999999999999876
Q ss_pred cC
Q 001580 890 NE 891 (1050)
Q Consensus 890 ~~ 891 (1050)
..
T Consensus 235 ~~ 236 (250)
T PRK14247 235 NP 236 (250)
T ss_pred CC
Confidence 43
No 186
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-41 Score=374.12 Aligned_cols=213 Identities=31% Similarity=0.508 Sum_probs=181.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecC--CCChHHHhhh
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA--KFGLMDLRKI 742 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~--~~~~~~~r~~ 742 (1050)
.|+++|++++|+++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+.
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 38999999999632 36999999999999999999999999999999999999999999999999984 2345567889
Q ss_pred eEEEcCCc--ccccccHHHhcccCC---CCCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 001580 743 LGIIPQSP--VLFSGTVRFNLDPFS---EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 743 i~~v~Q~~--~lf~~tv~~nl~~~~---~~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~l 813 (1050)
+||+||++ .+|..|+++|+.+.. ..+.. .+.++++.. |+.........+||||||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRT-----------GIEHLKDKPTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHC-----------CChhhhhCCcccCCHHHHHHHHH
Confidence 99999998 467889999997521 11222 233333333 44444556678899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
||||+.+|+||||||||++||+.+...+.+.|+++.+ ++|||++||+++.+.. |||+++|++|++++.|+++++.+
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999998753 7899999999999975 99999999999999999999875
No 187
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.9e-41 Score=365.26 Aligned_cols=215 Identities=29% Similarity=0.460 Sum_probs=182.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH-hhheE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 744 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~-r~~i~ 744 (1050)
++++||+++|++. ++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGKR--KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCCE--EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 4789999999643 69999999999999999999999999999999999999999999999999887766553 56799
Q ss_pred EEcCCcccccc-cHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
|+||++.+|.. |+++|+.+... ....+.. ..+.++++.+ |++........+||||||||++|||||+.+
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 151 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALATN 151 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999998886 99999974311 1111111 1233444443 566666777789999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 152 PKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 99999999999999999999999998865 47899999999998876 99999999999999999988754
No 188
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-41 Score=369.09 Aligned_cols=218 Identities=26% Similarity=0.426 Sum_probs=183.9
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCC--CCh
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGL 736 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~--~~~ 736 (1050)
+.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 18 ~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~ 95 (267)
T PRK14235 18 IKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDV 95 (267)
T ss_pred ceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccch
Confidence 46999999999964 3699999999999999999999999999999999999975 89999999999864 345
Q ss_pred HHHhhheEEEcCCcccccccHHHhcccCC---CC--C----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhH
Q 001580 737 MDLRKILGIIPQSPVLFSGTVRFNLDPFS---EH--S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 807 (1050)
Q Consensus 737 ~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~--~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq 807 (1050)
..+|+.++|+||++.+|..|+.+|+.+.. .. . .+++.++++..++.+.+ ....+..+.+|||||
T Consensus 96 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq 168 (267)
T PRK14235 96 VELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-------KDRLHEPGTGLSGGQ 168 (267)
T ss_pred HHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHHH
Confidence 56788999999999999889999997421 10 1 12234444444443221 123455667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 001580 808 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 886 (1050)
Q Consensus 808 ~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 886 (1050)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 169 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 248 (267)
T PRK14235 169 QQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEK 248 (267)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999976 99999999999999999999
Q ss_pred Hhhc
Q 001580 887 LLSN 890 (1050)
Q Consensus 887 l~~~ 890 (1050)
+...
T Consensus 249 ~~~~ 252 (267)
T PRK14235 249 MFTN 252 (267)
T ss_pred HHhC
Confidence 8754
No 189
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.7e-41 Score=363.50 Aligned_cols=206 Identities=28% Similarity=0.407 Sum_probs=171.8
Q ss_pred EEEEEEEEEeCCCC--CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH----H
Q 001580 666 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD----L 739 (1050)
Q Consensus 666 i~~~~v~~~y~~~~--~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~----~ 739 (1050)
++++||+++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++.. .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46899999996421 36999999999999999999999999999999999999999999999999998766432 3
Q ss_pred hhheEEEcCCcccccc-cHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 740 RKILGIIPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 740 r~~i~~v~Q~~~lf~~-tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
++.++|+||++.+|.. |+++|+.+... ....+. ...+.++++.+ |++........+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 5679999999998876 99999975321 111111 11233444443 5555566667789999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhhcCEEEEEeCCEE
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRV 878 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i 878 (1050)
||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|||+|||+++++..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998754 7899999999999878999999999974
No 190
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-38 Score=341.61 Aligned_cols=460 Identities=19% Similarity=0.259 Sum_probs=307.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 394 QVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTF 473 (1050)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~l~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~ 473 (1050)
.++.+.+.+......+.....++|.++.++++..|+.-+++.+.++++.++++|+.+|. +-...+..+.+.....+++.
T Consensus 61 f~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~IS-f~~s~lp~~~qa~il~l~s~ 139 (546)
T COG4615 61 FMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNIS-FAFSRLPELVQAIILTLGSA 139 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhccccccee-ehHhhhHHHHHHHHHHHHHH
Confidence 33445556666777888999999999999999999999999999999999999999887 22333445555555556666
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHchHHHHHHhchHHH--HHHHHH---
Q 001580 474 VLIGIVSTMSLWA-IMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDR--MADING--- 547 (1050)
Q Consensus 474 ~~~~~~~~~~~~~-~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ira~~~~~~--~~~~~~--- 547 (1050)
...+++++.++.+ ++.+++.+..-+....+..+ .-+...+....+.+.+...+.|.+..+..+...+ ..+.+.
T Consensus 140 aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k-~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a 218 (546)
T COG4615 140 AYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYK-HMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDA 218 (546)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcch
Confidence 6666666544332 22222222222211111111 1112223345577888889999999887754332 222221
Q ss_pred -HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001580 548 -KSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASL 626 (1050)
Q Consensus 548 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~ 626 (1050)
...+...+..........|..+.+..+.++.+|+.... ....++ .+.++ +...+.+..++..+..+...
T Consensus 219 ~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~----~w~st~---~a~ti---vlvlLflr~pL~s~vgilP~ 288 (546)
T COG4615 219 QEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSL----GWASTN---VAATI---VLVLLFLRTPLLSAVGILPT 288 (546)
T ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----ccchhh---HHHHH---HHHHHHHhhHHHHHHhhhhH
Confidence 11112222223322344455554444444443333211 111111 11111 11222334445555555555
Q ss_pred HHHHHHHHHHHHhhhcCCCCCccccCCCCCCCCCCCCccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCH
Q 001580 627 AENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGK 706 (1050)
Q Consensus 627 ~~~~~~a~~R~~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGK 706 (1050)
+..+..+.+++.++...|..+. -....+.|.| ..|+++||.|.|.+.. --+.-||++|++||+|-|+|.|||||
T Consensus 289 l~~AqvA~~kiakle~~~~~a~--~~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelvFliG~NGsGK 362 (546)
T COG4615 289 LLTAQVAFNKIAKLELAPYKAD--FPRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELVFLIGGNGSGK 362 (546)
T ss_pred HHHHHHHHHHHHHhhcCCcccc--CCCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEEEEECCCCCcH
Confidence 5667788888887755332221 1112223334 3599999999997542 35788999999999999999999999
Q ss_pred HHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHH
Q 001580 707 SSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIR 786 (1050)
Q Consensus 707 STll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~ 786 (1050)
||++++|+|+|.|++|+|++||.++...+++++|+-++-|+-|.+||+.++- +-...+.+.+..-+.+..+.....
T Consensus 363 ST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~----~e~~as~q~i~~~LqrLel~~kts 438 (546)
T COG4615 363 STLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLG----PEGKASPQLIEKWLQRLELAHKTS 438 (546)
T ss_pred HHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhC----CccCCChHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999999999999999999999999999986552 112244555555555544433222
Q ss_pred HccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhh
Q 001580 787 RNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTI 864 (1050)
Q Consensus 787 ~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~ 864 (1050)
-....+. ...||-|||+|+++--|++.+.+|++|||=-+.-||.=++.++..+.-.. .|+||+.||||-...
T Consensus 439 l~d~~fs------~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF 512 (546)
T COG4615 439 LNDGRFS------NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYF 512 (546)
T ss_pred ccCCccc------ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhh
Confidence 2111111 13699999999999999999999999999999999999999988776543 589999999999999
Q ss_pred hhcCEEEEEeCCEEEEe
Q 001580 865 IDCDRILLLDSGRVLEY 881 (1050)
Q Consensus 865 ~~~d~i~vl~~G~i~~~ 881 (1050)
..|||++.|++|++++.
T Consensus 513 ~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 513 IHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhHHHHHHHhcCceeec
Confidence 99999999999999885
No 191
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.6e-41 Score=377.95 Aligned_cols=216 Identities=29% Similarity=0.443 Sum_probs=181.7
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ....|+++|
T Consensus 4 ~i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGDK--VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCCe--EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 48999999999643 699999999999999999999999999999999999999999999999998653 345788899
Q ss_pred EEcCCccccc-ccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 745 IIPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 745 ~v~Q~~~lf~-~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
|+||++.++. .|+++|+.++. .....+..+. +.++++. .|+.........+||||||||++|||||+.+
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~--~~l~~~~~~~~~~LSgG~~qrv~la~al~~~ 153 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEF--ARLESKADVRVALLSGGMKRRLTLARALIND 153 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHH--CCChhHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 9999998885 59999996421 1222222111 1223333 2444445556678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|++|||||||+|||+.++..+++.|+++. +++|||++||+++++.. ||+|++|++|++++.|+++++...
T Consensus 154 p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 154 PQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999999864 47899999999999976 999999999999999999998754
No 192
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-41 Score=358.79 Aligned_cols=198 Identities=26% Similarity=0.448 Sum_probs=168.0
Q ss_pred EEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEE
Q 001580 667 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 746 (1050)
Q Consensus 667 ~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v 746 (1050)
+++|++++|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 367999999642 369999999999999999999999999999999999999999999999998853 3567789999
Q ss_pred cCCc--ccccccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 747 PQSP--VLFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 747 ~Q~~--~lf~~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
||++ .++..|+++|+.+... ....++.++++..++.++ .......||||||||++|||||+.+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYAL-----------KERHPLSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchh-----------cCCCchhCCHHHHHHHHHHHHHHhCC
Confidence 9998 3667899999975422 112345555555555443 33444689999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEE
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVL 879 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~ 879 (1050)
++|||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999863 57899999999999976 9999999999974
No 193
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.5e-41 Score=358.25 Aligned_cols=202 Identities=27% Similarity=0.428 Sum_probs=173.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ..+++.++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 468999999964 3799999999999999999999999999999999999999999999999988654 456788999
Q ss_pred EcCCccccc-ccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.+|. .|+++|+.++. ...++++.++++..++.+.+ ......||||||||++||||++.+|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSA-----------KKKVKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-----------hhhHhhCCHHHHHHHHHHHHHhcCC
Confidence 999998875 69999996432 12344555566665554443 3344679999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
++|||||||++||+.+++.+.+.|++.. .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999865 47899999999999976 9999999999998765
No 194
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-41 Score=372.10 Aligned_cols=213 Identities=25% Similarity=0.438 Sum_probs=182.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 4 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (277)
T PRK13652 4 IETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGL 82 (277)
T ss_pred EEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEE
Confidence 7899999999643 259999999999999999999999999999999999999999999999999987777778889999
Q ss_pred EcCCcc--cccccHHHhcccCC---CCCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 746 IPQSPV--LFSGTVRFNLDPFS---EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 746 v~Q~~~--lf~~tv~~nl~~~~---~~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
+||++. +|..|+.+|+.+.. ....+ .+.++++..++ ..........||||||||++||||
T Consensus 83 v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~Gq~qrl~lara 151 (277)
T PRK13652 83 VFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGL-----------EELRDRVPHHLSGGEKKRVAIAGV 151 (277)
T ss_pred EecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCC-----------hhHhcCCcccCCHHHHHHHHHHHH
Confidence 999983 67789999996421 12222 23334444444 334444557899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||++||+++++.. ||||++|++|++++.|+++++...
T Consensus 152 L~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 152 IAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999999999999999999999998653 7899999999999865 999999999999999999999753
No 195
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-41 Score=384.68 Aligned_cols=216 Identities=24% Similarity=0.406 Sum_probs=184.2
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.++...++ .++.||
T Consensus 19 ~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ig 94 (377)
T PRK11607 19 LLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPIN 94 (377)
T ss_pred eEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCEE
Confidence 4999999999964 369999999999999999999999999999999999999999999999999987664 567899
Q ss_pred EEcCCcccccc-cHHHhcccCCC---CCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE---HSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~---~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
|+||++.+|.. ||.+|+.+... .... ++.+.++..+ +.........+|||||||||+||||
T Consensus 95 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~-----------L~~~~~~~~~~LSgGq~QRVaLARA 163 (377)
T PRK11607 95 MMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVH-----------MQEFAKRKPHQLSGGQRQRVALARS 163 (377)
T ss_pred EEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------CchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999976 99999975321 1222 2333344433 4444455557899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 893 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 893 (1050)
|+.+|++|||||||++||+.++..+.+.|+++. .+.|+|+||||++++.. ||+|++|++|++++.|+++++..++..
T Consensus 164 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~~ 243 (377)
T PRK11607 164 LAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTT 243 (377)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCcc
Confidence 999999999999999999999999998887754 37899999999999866 999999999999999999999876654
Q ss_pred hH
Q 001580 894 SF 895 (1050)
Q Consensus 894 ~~ 895 (1050)
.|
T Consensus 244 ~~ 245 (377)
T PRK11607 244 RY 245 (377)
T ss_pred HH
Confidence 33
No 196
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-41 Score=367.87 Aligned_cols=218 Identities=28% Similarity=0.418 Sum_probs=182.4
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecC--CCChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIA--KFGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~--~~~~~ 737 (1050)
.++++|++++|++. ++|+|+||+|.+||++||+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 4 ~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGSN--HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCCe--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 38999999999643 699999999999999999999999999999999999987 4999999999986 44555
Q ss_pred HHhhheEEEcCCcccccc-cHHHhcccCC---CC--CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhH
Q 001580 738 DLRKILGIIPQSPVLFSG-TVRFNLDPFS---EH--SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 807 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~-tv~~nl~~~~---~~--~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq 807 (1050)
.+|++++|+||++.+|.. |+.+|+.+.. .. .. +.+.++++..++... +.........+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDE-------VKDRLNDYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccc-------hhhhhccChhhCCHHH
Confidence 678899999999999875 9999996421 10 11 123333333333211 1223455667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 001580 808 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 886 (1050)
Q Consensus 808 ~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 886 (1050)
|||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++++.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999997667999999999999876 99999999999999999999
Q ss_pred HhhcC
Q 001580 887 LLSNE 891 (1050)
Q Consensus 887 l~~~~ 891 (1050)
+....
T Consensus 235 ~~~~~ 239 (253)
T PRK14267 235 VFENP 239 (253)
T ss_pred HHhCC
Confidence 87543
No 197
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=367.87 Aligned_cols=219 Identities=23% Similarity=0.432 Sum_probs=184.2
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCC--CCh
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGL 736 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~--~~~ 736 (1050)
..++++||+++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++.. .++
T Consensus 12 ~~l~i~nl~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~ 89 (269)
T PRK14259 12 IIISLQNVTISYGTF--EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDP 89 (269)
T ss_pred ceEEEEeEEEEECCE--EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCH
Confidence 359999999999653 69999999999999999999999999999999999987 689999999999853 456
Q ss_pred HHHhhheEEEcCCcccccccHHHhcccCCC---CC---HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 737 MDLRKILGIIPQSPVLFSGTVRFNLDPFSE---HS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 737 ~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~~---~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
..+|+.++|+||++.+|..|+++|+.+... .. ++++.++++.+++.. +++........+||||||||
T Consensus 90 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~qr 162 (269)
T PRK14259 90 VEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-------ECKDKLNESGYSLSGGQQQR 162 (269)
T ss_pred HHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-------hhhhhhCCCcccCCHHHHHH
Confidence 677888999999999998899999975422 11 122333344333221 23344566677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeC-----------CEE
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDS-----------GRV 878 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~-----------G~i 878 (1050)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++++.. ||++++|++ |++
T Consensus 163 l~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~ 242 (269)
T PRK14259 163 LCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYL 242 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceE
Confidence 99999999999999999999999999999999999988667899999999999876 999999996 679
Q ss_pred EEecChhHHhhcC
Q 001580 879 LEYDTPEELLSNE 891 (1050)
Q Consensus 879 ~~~g~~~el~~~~ 891 (1050)
++.|+++++...+
T Consensus 243 ~~~~~~~~~~~~~ 255 (269)
T PRK14259 243 VEFNETKKIFNSP 255 (269)
T ss_pred EEeCCHHHHHhCc
Confidence 9999999997643
No 198
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.5e-41 Score=363.75 Aligned_cols=215 Identities=29% Similarity=0.452 Sum_probs=182.8
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++ +++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. .++.++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~-~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRA-ALARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChh-hhhhEEE
Confidence 789999999964 3699999999999999999999999999999999999999999999999998776543 4458999
Q ss_pred EcCCcccc-cccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLF-SGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf-~~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.++ ..|+++|+.+... ....+.. ..+.++++. .|++........+||||||||++|||||+++|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~--~gl~~~~~~~~~~LS~G~~qrl~laral~~~p 151 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLAR--LGLAERADDKVRELNGGHRRRVEIARALLHRP 151 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHH--cCChhhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999875 5699999965321 1111111 123344444 36666667777899999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
+||||||||++||+.+++.+.+.|+++. .++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 152 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 152 ALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 9999999999999999999999999875 37899999999999977999999999999999999988764
No 199
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-41 Score=359.34 Aligned_cols=202 Identities=27% Similarity=0.451 Sum_probs=172.9
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++|++++|++. ++++|+||+|++| ++||+||||||||||+++|+|+++|++|+|.++|.++...+ ..+++.++|
T Consensus 1 i~~~~~~~~~~~~--~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGKK--RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECCE--EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 4789999999643 6999999999999 99999999999999999999999999999999999987765 667889999
Q ss_pred EcCCcccccc-cHHHhcccCC---CCC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~---~~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+||++.+|.. |+++|+.+.. ... .+++.++++..++.++ ......+||||||||++|||||
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDR-----------AKKKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHH-----------HhCchhhCCHHHHHHHHHHHHH
Confidence 9999998876 9999986421 111 1233444444444333 3344568999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
+.+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++++.. |||+++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998767999999999999976 9999999999998765
No 200
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.6e-41 Score=377.96 Aligned_cols=226 Identities=23% Similarity=0.375 Sum_probs=185.5
Q ss_pred cEEEEEEEEEeCCC-----------CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC
Q 001580 665 SIKFEDVVLRYRPE-----------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK 733 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~-----------~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~ 733 (1050)
.++++|++++|+.. ..++++||||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 48999999999531 2369999999999999999999999999999999999999999999999999988
Q ss_pred CChHH---HhhheEEEcCCc--cccc-ccHHHhcccC----C-CCCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCC
Q 001580 734 FGLMD---LRKILGIIPQSP--VLFS-GTVRFNLDPF----S-EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGE 801 (1050)
Q Consensus 734 ~~~~~---~r~~i~~v~Q~~--~lf~-~tv~~nl~~~----~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~ 801 (1050)
.+... +|++|+||||+| .++. .||.+|+.+. . ..+..+..+. +.+.++.+ |+. ......+.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~v--gl~~~~~~~~p~ 160 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKV--GLLPNLINRYPH 160 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHc--CCChHHhcCCcc
Confidence 77543 577899999998 4664 5999998531 1 1222222211 12233332 332 23456667
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEE
Q 001580 802 NFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRV 878 (1050)
Q Consensus 802 ~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 878 (1050)
+||||||||++|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+||||++.+.. ||||++|++|+|
T Consensus 161 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~i 240 (331)
T PRK15079 161 EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHA 240 (331)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 8999999999999999999999999999999999999999999998753 7899999999999987 999999999999
Q ss_pred EEecChhHHhhcCCChHHH
Q 001580 879 LEYDTPEELLSNEGSSFSK 897 (1050)
Q Consensus 879 ~~~g~~~el~~~~~~~~~~ 897 (1050)
++.|+++++..+....|..
T Consensus 241 ve~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 241 VELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred EEEcCHHHHHcCCCCHHHH
Confidence 9999999998765444544
No 201
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-41 Score=370.15 Aligned_cols=212 Identities=25% Similarity=0.388 Sum_probs=181.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 11 ~l~i~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPGR--TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECCE--EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 49999999999643 6999999999999999999999999999999999999999999999999998877778888999
Q ss_pred EEcCCcccccc-cHHHhcccCCC--------C---CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE--------H---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~--------~---~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~ 812 (1050)
|+||++.++.. |+.+|+.+... . .++++.++++.+++. ........+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLK-----------PLAHRLVDSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCH-----------HHhcCCcccCCHHHHHHHH
Confidence 99999877654 99999974311 0 112234444444443 3344445689999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||+.+|+||||||||++||+.+.+.+.+.|+++. .++|+|++||+++++.. ||+|++|++|++++.|+++++..
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 9999999999999999999999999999999999864 37899999999999976 99999999999999999988754
No 202
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.8e-41 Score=358.30 Aligned_cols=203 Identities=29% Similarity=0.472 Sum_probs=174.8
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE------------eCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~------------~~~i 108 (1050)
.++++|++|+|+ ++++|+|+||++++|++++|+||||||||||||+|+|.++|.+|.+..- .+.+
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 478999999997 4689999999999999999999999999999999999999988766431 2359
Q ss_pred EEEecCCCC-CcccHHHHhccCCCC-----------CHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHH
Q 001580 109 AYVPQVSWI-FNATVRDNILFGSAF-----------EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 176 (1050)
Q Consensus 109 ~~v~Q~~~l-~~~TV~eni~~g~~~-----------~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv 176 (1050)
|||||.+.. +..||+|-+.+|+.- |.+.+..+++.+++.+..+.. ..+|||||||||
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-----------~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-----------VDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-----------ccccChhHHHHH
Confidence 999999865 588999999998531 122455667777777655432 358999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccc-cCCcEEEEeccCcchhh-hcCEEEEEcCCeEeeccChhhhh
Q 001580 177 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 177 ~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~-~~g~t~ilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
.|||||+++|++|+||||||+||...+..+++.+.+.. .+|+|+|+|+||+..+. .||++++|++|+++..|++++++
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999888876 46999999999999865 58999999999999999999887
Q ss_pred cCh
Q 001580 255 NNG 257 (1050)
Q Consensus 255 ~~~ 257 (1050)
+.+
T Consensus 228 T~e 230 (258)
T COG1120 228 TEE 230 (258)
T ss_pred CHH
Confidence 653
No 203
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=370.48 Aligned_cols=217 Identities=28% Similarity=0.511 Sum_probs=181.8
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCCh-HHHhhheE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL-MDLRKILG 744 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~-~~~r~~i~ 744 (1050)
++++|++++|+++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++.++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999633 369999999999999999999999999999999999999999999999999977653 56788899
Q ss_pred EEcCCcc--cccccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 745 IIPQSPV--LFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 745 ~v~Q~~~--lf~~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
|+||+|. ++..|+.+|+.+... .+..+..+ .+.+.++. .|++......+..||||||||++|||||+.
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~--~gl~~~~~~~~~~LS~G~~qrv~laral~~ 153 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRK-----RVDRALAE--IGLEKYRHRSPKTLSGGQGQCVALAGILTM 153 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHH--CCCHHHhcCCcccCCHHHHHHHHHHHHHHc
Confidence 9999985 556799999975321 11111111 12223333 245555556667899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
+|+||||||||++||+.++..+++.|+++. .+.|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 154 ~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 154 EPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999998865 47899999999999977999999999999999999998653
No 204
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-41 Score=363.81 Aligned_cols=212 Identities=25% Similarity=0.398 Sum_probs=176.7
Q ss_pred cEEEEEEEEEeCCCC--CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---H
Q 001580 665 SIKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L 739 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~--~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~ 739 (1050)
.++++||+++|+.+. .++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999996432 36999999999999999999999999999999999999999999999999998877643 3
Q ss_pred h-hheEEEcCCcccccc-cHHHhcccC---CCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 740 R-KILGIIPQSPVLFSG-TVRFNLDPF---SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 740 r-~~i~~v~Q~~~lf~~-tv~~nl~~~---~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
| +.++|+||++.+|.. |+++|+.+. ......+.. ..+.+.++. .|++........+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~--~gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIN-----SRALEMLAA--VGLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHH--cCCchhhhCChhhCCHHHHHHHHHH
Confidence 3 579999999988875 999998642 111111111 112233333 2555555666778999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhhcCEEEEEeCCEEEEecC
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDT 883 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~ 883 (1050)
||++.+|+||||||||++||+.+...+.+.|+++. +++|||+|||+++++..+|++++|++|++++.+.
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999864 4789999999999998888999999999998765
No 205
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-41 Score=372.19 Aligned_cols=213 Identities=30% Similarity=0.409 Sum_probs=178.8
Q ss_pred EEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH----hhh
Q 001580 667 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL----RKI 742 (1050)
Q Consensus 667 ~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~----r~~ 742 (1050)
.++|+++.|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQT--VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCCc--eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 466888888643 69999999999999999999999999999999999999999999999999987665443 457
Q ss_pred eEEEcCCccccc-ccHHHhcccCC---CCCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 743 LGIIPQSPVLFS-GTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 743 i~~v~Q~~~lf~-~tv~~nl~~~~---~~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
++|+||++.+|. .|+++|+.+.. .... +++.++++.. |+.........+||||||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELV-----------GLEGWEHKYPDELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCHhHhhCCcccCCHHHHHHHHHH
Confidence 999999999885 59999996421 1111 2233334443 444444555568999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 891 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 891 (1050)
|||+++|+||||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+++++....
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 252 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNP 252 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCc
Confidence 99999999999999999999999999999998864 37899999999999876 9999999999999999999997654
Q ss_pred C
Q 001580 892 G 892 (1050)
Q Consensus 892 ~ 892 (1050)
.
T Consensus 253 ~ 253 (269)
T cd03294 253 A 253 (269)
T ss_pred C
Confidence 3
No 206
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-41 Score=384.62 Aligned_cols=219 Identities=30% Similarity=0.436 Sum_probs=182.3
Q ss_pred EEEEEEEEEeCCCC----------------------CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccE
Q 001580 666 IKFEDVVLRYRPEL----------------------PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGR 723 (1050)
Q Consensus 666 i~~~~v~~~y~~~~----------------------~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~ 723 (1050)
|+++||++.|++.. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+
T Consensus 5 i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~ 84 (400)
T PRK10070 5 LEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQ 84 (400)
T ss_pred EEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCE
Confidence 67777777775431 13799999999999999999999999999999999999999999
Q ss_pred EEECCeecCCCChHHH----hhheEEEcCCcccccc-cHHHhcccCCC---CCH----HHHHHHHHHhcHHHHHHHccCC
Q 001580 724 ILIDGFDIAKFGLMDL----RKILGIIPQSPVLFSG-TVRFNLDPFSE---HSD----ADLWEALERAHLKDAIRRNSLG 791 (1050)
Q Consensus 724 i~~~g~~i~~~~~~~~----r~~i~~v~Q~~~lf~~-tv~~nl~~~~~---~~~----~~~~~~l~~~~~~~~i~~~p~g 791 (1050)
|.++|.++...+...+ |++++|+||++.+|.. |+++|+.+... ... +++.++++.. |
T Consensus 85 I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~-----------g 153 (400)
T PRK10070 85 VLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQV-----------G 153 (400)
T ss_pred EEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------C
Confidence 9999999988776553 3579999999999865 99999975321 111 2233334443 4
Q ss_pred cchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cC
Q 001580 792 LDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CD 868 (1050)
Q Consensus 792 l~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d 868 (1050)
++........+||||||||++|||||+.+|+||||||||++||+.+++.+++.|+++. .++|+|+|||+++++.. ||
T Consensus 154 L~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~D 233 (400)
T PRK10070 154 LENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGD 233 (400)
T ss_pred CChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCC
Confidence 4444555567899999999999999999999999999999999999999999998864 47899999999999876 99
Q ss_pred EEEEEeCCEEEEecChhHHhhcCCChH
Q 001580 869 RILLLDSGRVLEYDTPEELLSNEGSSF 895 (1050)
Q Consensus 869 ~i~vl~~G~i~~~g~~~el~~~~~~~~ 895 (1050)
+|++|++|++++.|+++++...+...|
T Consensus 234 ri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 234 RIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred EEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999999999999987654434
No 207
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4.3e-41 Score=360.30 Aligned_cols=209 Identities=31% Similarity=0.521 Sum_probs=174.0
Q ss_pred EEEEEEEEEeCCCC--CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhhe
Q 001580 666 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 743 (1050)
Q Consensus 666 i~~~~v~~~y~~~~--~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i 743 (1050)
++++||+++|++.. .++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .+..+|+.+
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999996431 169999999999999999999999999999999999999999999999999875 445678899
Q ss_pred EEEcCCcccccc-cHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
+|+||++.+|.. |+++|+.+.. .....+.. ..+.+.++.+ |++........+||||||||++||||++.
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELT-----ARLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhc
Confidence 999999999885 9999986421 11111111 1122333332 45555556667899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++++.. ||++++|++|++++.|
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999999864 47899999999999876 9999999999998754
No 208
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.6e-41 Score=363.81 Aligned_cols=220 Identities=21% Similarity=0.367 Sum_probs=184.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH-hhheE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKILG 744 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~-r~~i~ 744 (1050)
|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++.++
T Consensus 3 i~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDGF--KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCCe--EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 7899999999643 69999999999999999999999999999999999999999999999999887766543 45799
Q ss_pred EEcCCcccccc-cHHHhcccCCCCCHH---H---HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSEHSDA---D---LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~~~~~---~---~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
|+||++.+|.. |+++|+.+....... . .........+.++++.+ |++.........||||||||++||||+
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~laral 158 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGMLL 158 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999999986 999999753211000 0 00001112234445443 566666677789999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
+.+|++|||||||++||+.++..+++.|+++..++|+|++||+++++.. ||+|++|++|++++.|+++++..
T Consensus 159 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 159 MQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred hcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 9999999999999999999999999999997778999999999999976 99999999999999999998864
No 209
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=6.5e-41 Score=369.89 Aligned_cols=217 Identities=20% Similarity=0.326 Sum_probs=181.3
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH---HHhh
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRK 741 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~---~~r~ 741 (1050)
.|+++||+++|++. ++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++
T Consensus 7 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGNR--CIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 48999999999643 699999999999999999999999999999999999999999999999998766543 3467
Q ss_pred heEEEcCCcccccc-cHHHhcccC----CCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 742 ILGIIPQSPVLFSG-TVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 742 ~i~~v~Q~~~lf~~-tv~~nl~~~----~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
.++|+||++.+|.. |+.+|+.+. ......... ..+.+.++. .|+.........+||||||||++||||
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~--~gl~~~~~~~~~~LSgGq~qrv~lara 157 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLH-----STVMMKLEA--VGLRGAAKLMPSELSGGMARRAALARA 157 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHH--cCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999876 999998642 111111111 112223333 244444555567899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|+.+|++|||||||++||+.+++.+.+.|+++.+ ++|||+|||+++++.. ||++++|++|++++.|+++++.+.
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (269)
T PRK11831 158 IALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQAN 234 (269)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999998653 7899999999999877 999999999999999999998764
No 210
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-41 Score=371.11 Aligned_cols=214 Identities=27% Similarity=0.430 Sum_probs=183.5
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCc---cEEEECCeecCCCChHHHhh
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELER---GRILIDGFDIAKFGLMDLRK 741 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~---G~i~~~g~~i~~~~~~~~r~ 741 (1050)
.++++|++++|++...++++|+||+|++||++||+||||||||||+++|+|+++|++ |+|.++|.++...+...+++
T Consensus 5 ~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~ 84 (282)
T PRK13640 5 IVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIRE 84 (282)
T ss_pred eEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHh
Confidence 589999999996433369999999999999999999999999999999999999998 89999999998777777888
Q ss_pred heEEEcCCcc--cccccHHHhcccCCC---CCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 001580 742 ILGIIPQSPV--LFSGTVRFNLDPFSE---HSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 742 ~i~~v~Q~~~--lf~~tv~~nl~~~~~---~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~ 812 (1050)
++||+||++. ++..|+.+|+.+... .+.+ ++.++++.++ +.........+||||||||++
T Consensus 85 ~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~-----------L~~~~~~~~~~LS~G~~qrv~ 153 (282)
T PRK13640 85 KVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVG-----------MLDYIDSEPANLSGGQKQRVA 153 (282)
T ss_pred heEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCC-----------ChhHhcCCcccCCHHHHHHHH
Confidence 9999999983 567799999975311 2222 2333444444 444455556789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||+.+|++|||||||++||+.++..+.+.|+++.+ ++|||++||+++.+..||++++|++|++++.|+++++..
T Consensus 154 laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 154 IAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998653 789999999999997799999999999999999999865
No 211
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=365.39 Aligned_cols=218 Identities=24% Similarity=0.390 Sum_probs=182.3
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc--C---CccEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE--L---ERGRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~--p---~~G~i~~~g~~i~~--~~~~ 737 (1050)
.|+++|+++.|+.. ++|+|+||+|++||++||+||||||||||+++|+|+++ | ++|+|.++|.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQH--HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECCe--eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 48999999999643 69999999999999999999999999999999999997 3 58999999999863 3445
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC----CCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE----HSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~----~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+|+.++|+||++.+|..|+++|+.+... ..+. ++.++++..++.+.+ .........+|||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-------KDRLHTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhhhhCCcccCCHHHHH
Confidence 67888999999999998899999964321 1111 122233333332211 23345667789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+.+|+||||||||++||+.++..+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999876 9999999999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
.+.
T Consensus 243 ~~~ 245 (259)
T PRK14274 243 SNP 245 (259)
T ss_pred hCC
Confidence 654
No 212
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1e-40 Score=365.38 Aligned_cols=217 Identities=29% Similarity=0.496 Sum_probs=181.5
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCC----------
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG---------- 735 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~---------- 735 (1050)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 478999999964 36999999999999999999999999999999999999999999999999986543
Q ss_pred ---hHHHhhheEEEcCCccccc-ccHHHhcccCC----CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhH
Q 001580 736 ---LMDLRKILGIIPQSPVLFS-GTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 807 (1050)
Q Consensus 736 ---~~~~r~~i~~v~Q~~~lf~-~tv~~nl~~~~----~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq 807 (1050)
...+|+.++|+||++.+|. .|+.+|+.+.. ........ ..+.++++.+ |++......+..|||||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~ 151 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMV--GLADKADHMPAQLSGGQ 151 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhHhhcChhhcCHHH
Confidence 2356788999999998885 59999996421 11111111 1123344442 55555566667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecCh
Q 001580 808 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 884 (1050)
Q Consensus 808 ~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 884 (1050)
|||++|||||+.+|++|||||||++||+.++..+.+.|++..+ +.|+|+|||+++.+.. ||++++|++|++++.|++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 231 (252)
T TIGR03005 152 QQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKP 231 (252)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999998653 7899999999999866 999999999999999999
Q ss_pred hHHhhcC
Q 001580 885 EELLSNE 891 (1050)
Q Consensus 885 ~el~~~~ 891 (1050)
+++....
T Consensus 232 ~~~~~~~ 238 (252)
T TIGR03005 232 DEIFRQP 238 (252)
T ss_pred HHHhcCC
Confidence 9987643
No 213
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-41 Score=363.34 Aligned_cols=215 Identities=26% Similarity=0.431 Sum_probs=183.9
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH-HhhheE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LRKILG 744 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~-~r~~i~ 744 (1050)
++++|++++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++.. .|+.++
T Consensus 4 l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 81 (241)
T PRK10895 4 LTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIG 81 (241)
T ss_pred EEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeE
Confidence 889999999964 36999999999999999999999999999999999999999999999999998777644 567899
Q ss_pred EEcCCcccccc-cHHHhcccCCCC----CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSEH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~~----~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
|+||++.+|.. |+++|+.+.... ...+. ...+.++++.+ |++.........||||||||++||||++.
T Consensus 82 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 154 (241)
T PRK10895 82 YLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALAA 154 (241)
T ss_pred EeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHhc
Confidence 99999988875 999999753211 11111 12234455554 56666667778899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
+|++|||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 155 NPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 999999999999999999999999998865 47899999999988866 99999999999999999999864
No 214
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.5e-40 Score=365.45 Aligned_cols=224 Identities=22% Similarity=0.369 Sum_probs=198.7
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVA 109 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~ 109 (1050)
|+++|++|.|+. +.+++|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|.+.. +++.|+
T Consensus 3 i~~~nls~~~~~-~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~ 80 (275)
T cd03289 3 MTVKDLTAKYTE-GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFG 80 (275)
T ss_pred EEEEEEEEEeCC-CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEE
Confidence 789999999973 23579999999999999999999999999999999999997 5665432 123599
Q ss_pred EEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEE
Q 001580 110 YVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVF 189 (1050)
Q Consensus 110 ~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vl 189 (1050)
||||+|.+|+.||++|+........+++...++.+++...++.+|+++++.++++|.+||||||||++|||||+.+|+|+
T Consensus 81 ~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~il 160 (275)
T cd03289 81 VIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKIL 160 (275)
T ss_pred EECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999643334556777788899999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHHHhh
Q 001580 190 IFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAG 268 (1050)
Q Consensus 190 lLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~ 268 (1050)
||||||++||+.+.+.+.+.+... ..++|+|+|||+++++..||||++|++|++++.|+++++......|+.++...+
T Consensus 161 llDEpts~LD~~~~~~l~~~l~~~-~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 238 (275)
T cd03289 161 LLDEPSAHLDPITYQVIRKTLKQA-FADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISPSD 238 (275)
T ss_pred EEECccccCCHHHHHHHHHHHHHh-cCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhhcc
Confidence 999999999999999999877754 358999999999999988999999999999999999999988788888876654
No 215
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=4.4e-41 Score=358.96 Aligned_cols=206 Identities=22% Similarity=0.377 Sum_probs=171.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++|++++|++. ++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 i~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGNV--TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPP--KDRDIAM 76 (213)
T ss_pred CEEEeeEEEECCe--eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--ccceEEE
Confidence 4689999999653 69999999999999999999999999999999999999999999999999876554 2467999
Q ss_pred EcCCccccc-ccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.+|. .|+++|+.+.. .....+..+ .+.++++. .|++........+||||||||++|||||+.+|
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~--~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 149 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAEL--LQIEHLLDRKPKQLSGGQRQRVALGRAIVREP 149 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHH--cCCHHHHhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999885 59999996531 111111111 12223333 24445555566789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
++|||||||++||+.+++.+.+.|+++. .++|+|++||+++++.. ||+|++|++|++++.|
T Consensus 150 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 150 KVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999999865 37899999999999877 9999999999999875
No 216
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-40 Score=362.47 Aligned_cols=216 Identities=26% Similarity=0.445 Sum_probs=183.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCC--hHHHhhhe
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG--LMDLRKIL 743 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~--~~~~r~~i 743 (1050)
++++|++++|++ +++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 789999999964 36999999999999999999999999999999999999999999999999987643 34567889
Q ss_pred EEEcCCccccc-ccHHHhcccCC----CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHc
Q 001580 744 GIIPQSPVLFS-GTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 818 (1050)
Q Consensus 744 ~~v~Q~~~lf~-~tv~~nl~~~~----~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall 818 (1050)
+|+||++.+|. .|+++|+.+.. .....+.. ..+.++++. .|++.........||||||||++||||++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~--~gl~~~~~~~~~~LS~G~~qrv~la~al~ 152 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAE-----KQARELLAK--VGLAERAHHYPSELSGGQQQRVAIARALA 152 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHH--cCChHHHhcChhhcCHHHHHHHHHHHHHh
Confidence 99999998886 59999996531 11111111 112344444 36666666777889999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 819 RRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 819 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
.+|++|||||||++||+.++..+.+.|+++. .++|+|++||+++++.. ||++++|++|++++.|+++++...
T Consensus 153 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 153 VKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 9999999999999999999999999998865 47999999999999976 999999999999999999998754
No 217
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-41 Score=369.23 Aligned_cols=219 Identities=27% Similarity=0.470 Sum_probs=183.6
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 48999999999633347999999999999999999999999999999999999999999999999998777777888999
Q ss_pred EEcCCcc--cccccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 745 IIPQSPV--LFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 745 ~v~Q~~~--lf~~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
|+||++. ++..|+++|+.+.. .....+..+ .+.++++. .|++........+||||||||++|||||+.
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~--~~l~~~~~~~~~~LS~G~~qrl~laral~~ 159 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKK--VGMEDYLDKEPQNLSGGQKQRVAIASVLAL 159 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHH--cCCHHHhhCCcccCCHHHHHHHHHHHHHHc
Confidence 9999983 45679999997531 122222111 12223333 244445555667899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
+|++|||||||++||+.+.+.+++.|+++.+ ++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 160 ~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 160 NPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999998653 4899999999999877999999999999999999988653
No 218
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-40 Score=353.25 Aligned_cols=199 Identities=28% Similarity=0.423 Sum_probs=180.0
Q ss_pred EEEEEEEEEeCCCC---CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhh
Q 001580 666 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~---~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~ 742 (1050)
++++||+++|++.. +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 47899999997532 3699999999999999999999999999999999999999999999998 6
Q ss_pred eEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 743 LGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 743 i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
|+|+||+|.+|+.|+++|+.+.....++...++++.+++.+++..+|.|+++.++....+||||||||++|||||+.+|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998754445556777788888999999999999999999999999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHH-HHHHHc-CCcEEEEeecCchhhhhcCEEEEEeCCE
Q 001580 823 ILVLDEATAAVDVRTDALIQK-TIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGR 877 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~-~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~G~ 877 (1050)
++||||||++||+.+.+.+.+ .++... .+.|||++||+++.+..||++++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999988887 456553 4689999999999988899999999985
No 219
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.3e-40 Score=362.31 Aligned_cols=217 Identities=27% Similarity=0.458 Sum_probs=182.4
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCC--------hH
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG--------LM 737 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~--------~~ 737 (1050)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ..
T Consensus 4 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (250)
T PRK11264 4 IEVKNLVKKFHGQ--TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIR 81 (250)
T ss_pred EEEeceEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHH
Confidence 8999999999643 6999999999999999999999999999999999999999999999999986532 24
Q ss_pred HHhhheEEEcCCccccc-ccHHHhcccC----CCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 001580 738 DLRKILGIIPQSPVLFS-GTVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~-~tv~~nl~~~----~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~ 812 (1050)
.+|+.++|+||++.+|. .|+++|+.+. ......+.. ..+.+.++.+ |+.........+||||||||++
T Consensus 82 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv~ 154 (250)
T PRK11264 82 QLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEAT-----ARARELLAKV--GLAGKETSYPRRLSGGQQQRVA 154 (250)
T ss_pred HhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCcchhhCChhhCChHHHHHHH
Confidence 56788999999998886 5999999642 111111111 1123344443 5555556677899999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|||||+.+|+||||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 155 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 234 (250)
T PRK11264 155 IARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFAD 234 (250)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999998865 47899999999999976 999999999999999999998754
Q ss_pred C
Q 001580 891 E 891 (1050)
Q Consensus 891 ~ 891 (1050)
.
T Consensus 235 ~ 235 (250)
T PRK11264 235 P 235 (250)
T ss_pred C
Confidence 3
No 220
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.7e-41 Score=358.14 Aligned_cols=204 Identities=28% Similarity=0.483 Sum_probs=169.5
Q ss_pred EEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEE
Q 001580 667 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 746 (1050)
Q Consensus 667 ~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v 746 (1050)
+++|++++|++...++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 36799999965223699999999999999999999999999999999999999999999999999877777788899999
Q ss_pred cCCcc--cccccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 747 PQSPV--LFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 747 ~Q~~~--lf~~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
||++. ++..|+++|+.+... ....+..+ .+.++++. .|++.........||||||||++|||||+.+|
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~--~~l~~~~~~~~~~LSgG~~qrv~laral~~~p 153 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALEL--VGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDP 153 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHH--cCcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99984 567799999965311 11111111 12233333 24444455566789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhh-cCEEEEEeCCE
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGR 877 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~ 877 (1050)
++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++++.. ||+|++|++|+
T Consensus 154 ~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 154 DILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999998754 7899999999999988 99999999985
No 221
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=9.8e-41 Score=345.67 Aligned_cols=178 Identities=33% Similarity=0.574 Sum_probs=163.9
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|+...+++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+|+.++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 478999999965323699999999999999999999999999999999999999999999999988665 5567888999
Q ss_pred EcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 001580 746 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 825 (1050)
Q Consensus 746 v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ill 825 (1050)
+||++.+|+.|+++|+ ..+||||||||++||||++++|++||
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999988999886 35799999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEec
Q 001580 826 LDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYD 882 (1050)
Q Consensus 826 LDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g 882 (1050)
|||||++||+.+++.+++.|++..+++|+|++||+++++..||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999876789999999999999889999999999998754
No 222
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=364.02 Aligned_cols=211 Identities=28% Similarity=0.439 Sum_probs=181.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++. ++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 3 l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 3 LEARNLSVRLGGR--TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred EEEEeEEEEeCCe--eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 7899999999643 69999999999999999999999999999999999999999999999999988777777888999
Q ss_pred EcCCccc-ccccHHHhcccCCC-C--C----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVL-FSGTVRFNLDPFSE-H--S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~l-f~~tv~~nl~~~~~-~--~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+||++.+ +..|+++|+.+... . . +..+.++++.. |++........+||||||||++|||||
T Consensus 81 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgGe~qrv~la~al 149 (258)
T PRK13548 81 LPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQV-----------DLAHLAGRDYPQLSGGEQQRVQLARVL 149 (258)
T ss_pred EccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHc-----------CCHhHhcCCcccCCHHHHHHHHHHHHH
Confidence 9999987 56699999865321 1 1 11233333333 444445556678999999999999999
Q ss_pred c------cCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 818 L------RRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 818 l------~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
+ .+|++|||||||++||+.+...+.+.|+++. .++|||++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 150 ~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 150 AQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred hcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHh
Confidence 9 5999999999999999999999999999865 47899999999999876 9999999999999999999886
Q ss_pred h
Q 001580 889 S 889 (1050)
Q Consensus 889 ~ 889 (1050)
.
T Consensus 230 ~ 230 (258)
T PRK13548 230 T 230 (258)
T ss_pred C
Confidence 4
No 223
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=365.90 Aligned_cols=211 Identities=26% Similarity=0.444 Sum_probs=182.0
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 369999999999999999999999999999999999999999999999999887777778888999
Q ss_pred EcCCcccccc-cHHHhcccCCC--------CC---HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSE--------HS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~--------~~---~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~l 813 (1050)
+||++.++.. |+.+|+.+... .. +..+.++++.. |++.........||||||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQT-----------RINHLADRRLTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHc-----------CCHHHHcCCcccCCHHHHHHHHH
Confidence 9999988866 99999975311 01 11233333333 44444455667899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||++.+|++|||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. ||++++|++|+++..|+++++..
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999999998865 47899999999999876 99999999999999999988864
No 224
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-41 Score=346.71 Aligned_cols=203 Identities=27% Similarity=0.436 Sum_probs=174.2
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i 108 (1050)
+|+++|+||.|. ++.+++|+||+|++||+++++|||||||||+||+|.++++|++|.+.. +|.+|
T Consensus 1 MI~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~I 77 (309)
T COG1125 1 MIEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKI 77 (309)
T ss_pred CceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhh
Confidence 489999999997 468999999999999999999999999999999999999999987653 35579
Q ss_pred EEEecCCCCC-cccHHHHhccCCC---CCHH----HHHHHHHHhCcHH--HHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 109 AYVPQVSWIF-NATVRDNILFGSA---FEPA----RYEKAIDVTSLQH--DLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 109 ~~v~Q~~~l~-~~TV~eni~~g~~---~~~~----~~~~~~~~~~l~~--~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
|||-|..-|| ..||.|||.+-.. ++++ +..+.++..+|.. ..+..| ++|||||+|||.+
T Consensus 78 GYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv 146 (309)
T COG1125 78 GYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGV 146 (309)
T ss_pred hhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHH
Confidence 9999999887 7899999986422 2333 3344555666643 344454 6999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
||||+.+|+|+|+||||++|||-++..+.+.+++..+ -|+|+|+||||++++-. +|||++|++|+++..+++++++.+
T Consensus 147 ~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~ 226 (309)
T COG1125 147 ARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN 226 (309)
T ss_pred HHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998877654 49999999999998654 799999999999999999999877
Q ss_pred h
Q 001580 257 G 257 (1050)
Q Consensus 257 ~ 257 (1050)
+
T Consensus 227 P 227 (309)
T COG1125 227 P 227 (309)
T ss_pred c
Confidence 4
No 225
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-41 Score=359.99 Aligned_cols=208 Identities=24% Similarity=0.346 Sum_probs=171.1
Q ss_pred EEEEEEEEEeCCCC--CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhhe
Q 001580 666 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 743 (1050)
Q Consensus 666 i~~~~v~~~y~~~~--~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i 743 (1050)
++++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 46899999996411 369999999999999999999999999999999999999999999999998863 45789
Q ss_pred EEEcCCccccc-ccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 744 GIIPQSPVLFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 744 ~~v~Q~~~lf~-~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
+|+||++.+|. .|+++|+.+... ....... ..+.++++.+ |++........+||||||||++|||||+.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEAR-----ERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999887 599999864211 1111110 1122333332 44444555567899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEe--CCEEEEecChh
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLD--SGRVLEYDTPE 885 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~--~G~i~~~g~~~ 885 (1050)
+|++|||||||++||+.++..+++.|+++. .++|+|+|||+++++.. ||++++|+ +|++++.++.+
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 999999999999999999999999999864 37899999999998866 99999999 79999987754
No 226
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=362.53 Aligned_cols=218 Identities=28% Similarity=0.435 Sum_probs=182.1
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~--~~~~ 737 (1050)
.++++||++.|++. ++++|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .+..
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14240 3 KISVKDLDLFYGDF--QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVN 80 (250)
T ss_pred eEEEEEEEEEECCc--eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchH
Confidence 58999999999643 699999999999999999999999999999999999863 69999999999864 3445
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC---C-C----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~-~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+|+.++|+||++.+|..|+++|+.+... . . ++.+.++++.+++.+ ++.......+.+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~q 153 (250)
T PRK14240 81 QLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWD-------EVKDRLKKSALGLSGGQQQ 153 (250)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhHHHHhcCCCCCCHHHHH
Confidence 67888999999999888999999975311 1 1 122333333333221 1223345667789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 154 RLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988668899999999998876 9999999999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
...
T Consensus 234 ~~~ 236 (250)
T PRK14240 234 TNP 236 (250)
T ss_pred hCC
Confidence 543
No 227
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=360.16 Aligned_cols=217 Identities=28% Similarity=0.411 Sum_probs=180.1
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH-Hhhhe
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LRKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~-~r~~i 743 (1050)
.++++|++++|+. .++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 3899999999964 36999999999999999999999999999999999999999999999999998877654 57789
Q ss_pred EEEcCCcccccc-cHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+|+||++.+|.. |+++|+.+... ....+..+. +.+.++.++ ++..........||||||||++||||++.+|
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQER-----IKWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQP 156 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHH-----HHHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhCC
Confidence 999999998875 99999975321 111111111 122222221 1222334456789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
+||||||||++||+.+.+.+.+.|+++. +++|+|++||+++++.. ||++++|++|++++.|+++++..
T Consensus 157 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 157 RLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 9999999999999999999999999865 47999999999998766 99999999999999999999864
No 228
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=367.19 Aligned_cols=213 Identities=23% Similarity=0.380 Sum_probs=183.1
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhhe
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 743 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i 743 (1050)
..|+++||+++|++. .+|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 6 ~~l~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGKY--TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECCE--EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 359999999999743 699999999999999999999999999999999999999999999999999887777788899
Q ss_pred EEEcCCccccc-ccHHHhcccCC-C-------CCH---HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 001580 744 GIIPQSPVLFS-GTVRFNLDPFS-E-------HSD---ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 811 (1050)
Q Consensus 744 ~~v~Q~~~lf~-~tv~~nl~~~~-~-------~~~---~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl 811 (1050)
+|+||++.+|. .|+++|+.+.. . ..+ +.+.++++.. |++........+||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQAT-----------GITHLADQSVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc-----------CCHHHhcCCcccCChHHHHHH
Confidence 99999998875 59999986531 1 011 1233333333 444445556678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 812 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 812 ~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
+||||++.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999876 9999999999999999998876
Q ss_pred h
Q 001580 889 S 889 (1050)
Q Consensus 889 ~ 889 (1050)
.
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 4
No 229
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=363.72 Aligned_cols=218 Identities=28% Similarity=0.417 Sum_probs=181.5
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcc---ccC--CccEEEECCeecCCC--ChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRI---VEL--ERGRILIDGFDIAKF--GLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~---~~p--~~G~i~~~g~~i~~~--~~~ 737 (1050)
.++++|+++.|++. ++|+|+||+|++||++||+||||||||||+++|+|+ ++| ++|+|.++|.++... +..
T Consensus 3 ~l~~~~~~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGDF--HALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECCE--eEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 48999999999653 699999999999999999999999999999999997 454 589999999998754 235
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCC---CC-CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~-~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+|+.++|+||++.+|..|+.+|+.+.. .. .. ..+.++++.+++.+. +.+.....+.+|||||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDE-------VKDKLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcc-------hhhhhhCCcccCCHHHHH
Confidence 6788899999999999889999996421 11 11 122333333332211 123455667889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|||+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999866 9999999999999999999997
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
++.
T Consensus 234 ~~~ 236 (250)
T PRK14245 234 TNP 236 (250)
T ss_pred cCC
Confidence 654
No 230
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=369.94 Aligned_cols=217 Identities=26% Similarity=0.457 Sum_probs=181.0
Q ss_pred EEEEEEEEEeCCCC---CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCC----ChHH
Q 001580 666 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~~---~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~----~~~~ 738 (1050)
|+++|++++|++.. +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... +...
T Consensus 3 i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13641 3 IKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLKK 82 (287)
T ss_pred EEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996321 3699999999999999999999999999999999999999999999999998653 2345
Q ss_pred HhhheEEEcCCc--ccccccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHH
Q 001580 739 LRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 739 ~r~~i~~v~Q~~--~lf~~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~qrl~ 812 (1050)
.++.++|+||++ .+|..|+.+|+.+.. .....+..+ .+.++++. .|++ ........+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~--~gL~~~~~~~~~~~LSgGq~qrl~ 155 (287)
T PRK13641 83 LRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKK--VGLSEDLISKSPFELSGGQMRRVA 155 (287)
T ss_pred HHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHH--cCCChhHhhCCcccCCHHHHHHHH
Confidence 677899999998 477789999996421 112221111 12334444 2554 3456667889999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||+.+|++|||||||++||+.+...+.+.|+++. .+.|||++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 156 IAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999875 47899999999999876 99999999999999999999865
No 231
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=9e-41 Score=358.61 Aligned_cols=207 Identities=27% Similarity=0.420 Sum_probs=172.2
Q ss_pred EEEEEEEEEeCCCC--CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---Hh
Q 001580 666 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LR 740 (1050)
Q Consensus 666 i~~~~v~~~y~~~~--~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~r 740 (1050)
++++||+++|++.. .++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 36999999999999999999999999999999999999999999999999998776544 33
Q ss_pred -hheEEEcCCccccc-ccHHHhcccC---CCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 741 -KILGIIPQSPVLFS-GTVRFNLDPF---SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 741 -~~i~~v~Q~~~lf~-~tv~~nl~~~---~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
+.++|+||++.+|. .|+++|+.+. ......+.. ..+.++++. .|++.........||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~--~~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAK-----ERAYEMLEK--VGLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHH--cCChhhhhCChhhCCHHHHHHHHHHH
Confidence 67999999999886 4999999642 111111111 112234443 35555556666789999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhhcCEEEEEeCCEEE
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVL 879 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~ 879 (1050)
||+.+|+||||||||++||+.++..+.+.|+++. .++|+|++||+++++..||+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999875 378999999999999889999999999985
No 232
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=363.99 Aligned_cols=218 Identities=28% Similarity=0.415 Sum_probs=181.9
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCCCC--hH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFG--LM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~~~--~~ 737 (1050)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++...+ ..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 4999999999964 3699999999999999999999999999999999999985 7999999999986432 34
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCC---CCCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
.+|+.++|+||++.+|..|+++|+.+.. ..... .+.++++.+++.+ .+..........||||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgG~~qr 162 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWD-------ETSDRLKSPALSLSGGQQQR 162 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc-------chhhhhcCChhhCCHHHHHH
Confidence 5678899999999988899999997431 11221 2233333333211 11233455667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
++|||||+.+|+||||||||++||+.++..+.+.|+++.+++|+|+|||+++++.. ||+|++|++|++++.|+++++..
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987668999999999999876 99999999999999999999976
Q ss_pred cC
Q 001580 890 NE 891 (1050)
Q Consensus 890 ~~ 891 (1050)
.+
T Consensus 243 ~~ 244 (258)
T PRK14268 243 NP 244 (258)
T ss_pred CC
Confidence 54
No 233
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=363.37 Aligned_cols=218 Identities=26% Similarity=0.387 Sum_probs=181.6
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCC---------
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF--------- 734 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~--------- 734 (1050)
+.++++||++.|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (257)
T PRK10619 4 NKLNVIDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKV 81 (257)
T ss_pred ccEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccc
Confidence 459999999999643 699999999999999999999999999999999999999999999999988542
Q ss_pred ----ChHHHhhheEEEcCCcccccc-cHHHhcccCC----CCCHHHHHHHHHHhcHHHHHHHccCCcchhh-hcCCCCCC
Q 001580 735 ----GLMDLRKILGIIPQSPVLFSG-TVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQV-SEAGENFS 804 (1050)
Q Consensus 735 ----~~~~~r~~i~~v~Q~~~lf~~-tv~~nl~~~~----~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v-~~~~~~LS 804 (1050)
....+++.++|+||++.+|.. |+++|+.+.. .....+.. ..+.++++.+ |+.... ......||
T Consensus 82 ~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~LS 154 (257)
T PRK10619 82 ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEAR-----ERAVKYLAKV--GIDERAQGKYPVHLS 154 (257)
T ss_pred ccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHH-----HHHHHHHHHc--CCChhhhhCCcccCC
Confidence 123567889999999999875 9999986421 11111111 1122334432 444433 55667899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 805 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 805 gGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++++.. ||||++|++|++++.|
T Consensus 155 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~ 234 (257)
T PRK10619 155 GGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEG 234 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999875 47999999999999987 9999999999999999
Q ss_pred ChhHHhhc
Q 001580 883 TPEELLSN 890 (1050)
Q Consensus 883 ~~~el~~~ 890 (1050)
+++++...
T Consensus 235 ~~~~~~~~ 242 (257)
T PRK10619 235 APEQLFGN 242 (257)
T ss_pred CHHHhhhC
Confidence 99998754
No 234
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=363.12 Aligned_cols=218 Identities=24% Similarity=0.397 Sum_probs=181.4
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccc--cC---CccEEEECCeecCCC--ChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--EL---ERGRILIDGFDIAKF--GLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~--~p---~~G~i~~~g~~i~~~--~~~ 737 (1050)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|++ .| ++|+|.++|.++... +..
T Consensus 5 ~l~~~~l~~~~~~~--~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNKK--KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECCe--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 38999999999643 6999999999999999999999999999999999995 46 499999999998643 334
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCC---CC-CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~-~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+|+.++|+||++.+|..|+++|+.+.. .. .. +++.++++..++.. ++.+..+....+|||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWD-------EVKDRLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCch-------hHHHHHhcCcccCCHHHHH
Confidence 5788899999999999899999986421 11 11 12223333333221 1223456667889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+.+|++|||||||++||+.++..+.+.|++..+++|+|++||+++++.. ||+|++|++|++++.|+++++.
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999866 9999999999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
+.+
T Consensus 236 ~~~ 238 (252)
T PRK14239 236 MNP 238 (252)
T ss_pred hCC
Confidence 654
No 235
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=7.1e-41 Score=375.38 Aligned_cols=207 Identities=26% Similarity=0.449 Sum_probs=173.6
Q ss_pred EeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCcccc
Q 001580 674 RYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLF 753 (1050)
Q Consensus 674 ~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf 753 (1050)
+|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .+..+|+++||+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 5643 369999999999999999999999999999999999999999999999999876 4456788999999999988
Q ss_pred cc-cHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecc
Q 001580 754 SG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEA 829 (1050)
Q Consensus 754 ~~-tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEp 829 (1050)
.. |+++|+.+... ....+.. ..+.++++.+ |+.........+||||||||++|||||+++|++||||||
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEP 151 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAE-----ERAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEP 151 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 76 99999975321 1111111 1122334432 444445556678999999999999999999999999999
Q ss_pred CcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 830 TAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 830 ts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|+|||+.+++.+++.|+++. .++|||++||+++++.. ||+|++|++|++++.|+++++.+.
T Consensus 152 t~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 152 TTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999999999999999875 47899999999999987 999999999999999999998764
No 236
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=365.21 Aligned_cols=218 Identities=25% Similarity=0.456 Sum_probs=181.4
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCCC--ChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF--GLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~~--~~~ 737 (1050)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++... +..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 4899999999964 369999999999999999999999999999999999865 7899999999998643 334
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCC---CC-CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~-~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+++.++|+||++.+|..|+.+|+.+.. .. .. +.+.++++..++.. ++....+..+.+|||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWD-------EVKDRLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCc-------chHHHHhcCcccCCHHHHH
Confidence 5678899999999999889999987421 11 11 12223333332211 1123445667889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|||++||+++++.. ||+|++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998667899999999999876 9999999999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
.+.
T Consensus 252 ~~~ 254 (268)
T PRK14248 252 TSP 254 (268)
T ss_pred hCC
Confidence 653
No 237
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=361.45 Aligned_cols=215 Identities=25% Similarity=0.364 Sum_probs=180.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC------CChHHH
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK------FGLMDL 739 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~------~~~~~~ 739 (1050)
++++|+++.|++. ++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....+
T Consensus 3 l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 3 IQLNGINCFYGAH--QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEeeEEEECCe--eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 7899999999643 69999999999999999999999999999999999999999999999998731 123456
Q ss_pred hhheEEEcCCcccccc-cHHHhcccCC----CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 740 RKILGIIPQSPVLFSG-TVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 740 r~~i~~v~Q~~~lf~~-tv~~nl~~~~----~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
|+.++|+||++.+|.. |+.+|+.... .....+.. ..+.++++.+ |++........+||||||||++||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la 153 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAIA 153 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHH
Confidence 7889999999998875 9999986311 11111111 1233444443 566666666788999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
||++.+|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 154 ral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 154 RALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 99999999999999999999999999999999875 47999999999999976 99999999999999999988754
No 238
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=373.24 Aligned_cols=223 Identities=25% Similarity=0.383 Sum_probs=183.4
Q ss_pred cEEEEEEEEEeCCC--------CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCCh
Q 001580 665 SIKFEDVVLRYRPE--------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL 736 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~--------~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~ 736 (1050)
.|+++|+++.|+.. ...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 38999999999621 2369999999999999999999999999999999999999999999999999988765
Q ss_pred H---HHhhheEEEcCCcc--cccc-cHHHhccc----CCCCCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCC
Q 001580 737 M---DLRKILGIIPQSPV--LFSG-TVRFNLDP----FSEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 802 (1050)
Q Consensus 737 ~---~~r~~i~~v~Q~~~--lf~~-tv~~nl~~----~~~~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~ 802 (1050)
. .+|++|+||||+|. ++.. |+.+|+.. ...... +++.++++.+++.+ ......+..
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP----------EHYDRYPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh----------HHhcCCCcc
Confidence 4 45778999999983 5543 88887742 111111 22333333333321 233455678
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEE
Q 001580 803 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVL 879 (1050)
Q Consensus 803 LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~ 879 (1050)
||||||||++|||||+.+|+|||+||||++||+.++..+.+.|+++.+ +.|+|+||||++.+.. ||+|++|++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998653 7899999999999986 9999999999999
Q ss_pred EecChhHHhhcCCChHHH
Q 001580 880 EYDTPEELLSNEGSSFSK 897 (1050)
Q Consensus 880 ~~g~~~el~~~~~~~~~~ 897 (1050)
+.|+.+++.++....|.+
T Consensus 235 e~g~~~~~~~~p~hpyt~ 252 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQ 252 (327)
T ss_pred EECCHHHHhcCCCCHHHH
Confidence 999999998765545554
No 239
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9.2e-41 Score=360.74 Aligned_cols=211 Identities=28% Similarity=0.422 Sum_probs=178.2
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH-HhhheE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LRKILG 744 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~-~r~~i~ 744 (1050)
|+++||++.|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .++.++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQS--HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCCe--EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 4689999999743 6999999999999999999999999999999999999999999999999998776654 466799
Q ss_pred EEcCCcccccc-cHHHhcccCCC-C--CHH-HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE-H--SDA-DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~-~--~~~-~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
|+||++.+|.. |+++|+.+... . ... ...++++.. .++.........+||||||||++|||||++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~----------~~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELF----------PVLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHH----------HhHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999876 99999964311 1 111 112222221 123344556667899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
+|++|||||||++||+.++..+++.|.+..+ ++|+|++||+++++.. ||+|+++++|++++.|+++++.
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999998653 7899999999999986 9999999999999999999873
No 240
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=367.42 Aligned_cols=215 Identities=26% Similarity=0.439 Sum_probs=182.3
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|++..+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 48999999999753335999999999999999999999999999999999999999999999999998877778889999
Q ss_pred EEcCCcc-cc-cccHHHhcccCCC---CCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 745 IIPQSPV-LF-SGTVRFNLDPFSE---HSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 745 ~v~Q~~~-lf-~~tv~~nl~~~~~---~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
|+||++. +| ..|+++|+.+... .... ++.++++.. |+.......+.+||||||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQV-----------DMLERADYEPNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhhCCcccCCHHHHHHHHHHH
Confidence 9999984 44 5589999865311 1111 222333333 3333445566789999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|++.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++++..||||++|++|++++.|+++++...
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998653 7899999999999877999999999999999999998653
No 241
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=368.89 Aligned_cols=217 Identities=22% Similarity=0.370 Sum_probs=181.5
Q ss_pred EEEEEEEEEeCCCC---CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCC----ChHH
Q 001580 666 IKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~~---~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~----~~~~ 738 (1050)
++++||+++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999996421 3699999999999999999999999999999999999999999999999998753 3456
Q ss_pred HhhheEEEcCCc--ccccccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHH
Q 001580 739 LRKILGIIPQSP--VLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 739 ~r~~i~~v~Q~~--~lf~~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~qrl~ 812 (1050)
+|+.|+|+||++ .+|..|+++|+.+.. .....+..+ .+.++++. .|+. ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~--~~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEA-----LAREKLAL--VGISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHH--cCCChhhhhCCcccCCHHHHHHHH
Confidence 788899999998 577789999996431 112222211 12233443 2554 2346667789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|||++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998653 7899999999999876 99999999999999999999865
No 242
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=367.49 Aligned_cols=215 Identities=27% Similarity=0.420 Sum_probs=183.5
Q ss_pred cEEEEEEEEEeCCC-CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhhe
Q 001580 665 SIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~-~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i 743 (1050)
.++++||+++|+.. ..++|+|+||+|.+||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 38999999999642 23599999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEcCCcc--cccccHHHhcccCC---CCCHHH----HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 744 GIIPQSPV--LFSGTVRFNLDPFS---EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 744 ~~v~Q~~~--lf~~tv~~nl~~~~---~~~~~~----~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
+|+||++. ++..|+.+|+.+.. .....+ +.++++.+++.+ ........||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLD-----------FKTREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHh-----------HhhCCcccCCHHHHHHHHHH
Confidence 99999983 56779999997431 122222 233444444433 34445578999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|++||+++++..||+|++|++|++++.|+++++...
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998753 7899999999999978999999999999999999998754
No 243
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.2e-40 Score=359.48 Aligned_cols=211 Identities=25% Similarity=0.409 Sum_probs=173.0
Q ss_pred EEEEEEEEEeCCCC--CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCCh---HHHh
Q 001580 666 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL---MDLR 740 (1050)
Q Consensus 666 i~~~~v~~~y~~~~--~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~---~~~r 740 (1050)
++++||+++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 269999999999999999999999999999999999999999999999999987663 4677
Q ss_pred hheEEEcCCcc--cc-cccHHHhcccC----CCCCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHH
Q 001580 741 KILGIIPQSPV--LF-SGTVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 741 ~~i~~v~Q~~~--lf-~~tv~~nl~~~----~~~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~qrl~ 812 (1050)
+.++|+||++. ++ ..|+++|+.+. ....+.+..+.. ..+.++.+ |+. ........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHHH
Confidence 88999999993 44 45999998632 111111111100 12333432 453 4556677889999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
|||||+.+|++|||||||++||+.+++.+.+.|+++.+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998754 7899999999999985 9999999999998754
No 244
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=361.96 Aligned_cols=203 Identities=28% Similarity=0.395 Sum_probs=174.3
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+++.++
T Consensus 12 ~l~i~~l~~~~~~~--~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i~ 84 (257)
T PRK11247 12 PLLLNAVSKRYGER--TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDTR 84 (257)
T ss_pred cEEEEEEEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCceE
Confidence 49999999999643 6999999999999999999999999999999999999999999999998763 4677899
Q ss_pred EEcCCccccc-ccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 745 IIPQSPVLFS-GTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 745 ~v~Q~~~lf~-~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
|+||++.+|. .|+++|+.+... ..+.++.++++..+ +.........+||||||||++|||||+++|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVG-----------LADRANEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcC-----------ChhHhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999887 599999975321 12233444444444 4444455567899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChh
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPE 885 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~ 885 (1050)
+|||||||++||+.++..+.+.|+++. .++|+|+|||+++++.. ||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999999998864 37899999999999866 9999999999999988765
No 245
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-41 Score=353.80 Aligned_cols=223 Identities=30% Similarity=0.417 Sum_probs=193.1
Q ss_pred cEEEEEEEEEeCCCCC----------------------CceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCcc
Q 001580 665 SIKFEDVVLRYRPELP----------------------PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERG 722 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~----------------------~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G 722 (1050)
.|+++||++-|+.+.. ..++|+||+|+.||++.|.|-||||||||+++|.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 4899999998864311 138999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCCChHHH----hhheEEEcCCcccccc-cHHHhcccCCCC-------CHHHHHHHHHHhcHHHHHHHccC
Q 001580 723 RILIDGFDIAKFGLMDL----RKILGIIPQSPVLFSG-TVRFNLDPFSEH-------SDADLWEALERAHLKDAIRRNSL 790 (1050)
Q Consensus 723 ~i~~~g~~i~~~~~~~~----r~~i~~v~Q~~~lf~~-tv~~nl~~~~~~-------~~~~~~~~l~~~~~~~~i~~~p~ 790 (1050)
+|.++|.|+.+++..++ |+++++|+|+..||.. ||.+|..|+-+. ..+...++++.+++.+|-.+.|
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp- 162 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP- 162 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc-
Confidence 99999999999998876 4569999999999976 999999876431 1234556666777766666655
Q ss_pred CcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-c
Q 001580 791 GLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-C 867 (1050)
Q Consensus 791 gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~ 867 (1050)
.+||||+||||.|||||..+|+|||+|||+|+|||--+..+++.|.++.+ ++||++||||+++..+ .
T Consensus 163 ----------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 163 ----------NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred ----------ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 68999999999999999999999999999999999999999999987643 6999999999999876 9
Q ss_pred CEEEEEeCCEEEEecChhHHhhcCCChHHHH
Q 001580 868 DRILLLDSGRVLEYDTPEELLSNEGSSFSKM 898 (1050)
Q Consensus 868 d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~ 898 (1050)
|||.+|++|+|+..|||+|++.++...|-.-
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~ 263 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVRD 263 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHHH
Confidence 9999999999999999999998876666543
No 246
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=367.84 Aligned_cols=215 Identities=25% Similarity=0.414 Sum_probs=182.2
Q ss_pred cEEEEEEEEEeCCC----CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCC-hHHH
Q 001580 665 SIKFEDVVLRYRPE----LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG-LMDL 739 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~----~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~-~~~~ 739 (1050)
.++++|++++|+.. .+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999632 236999999999999999999999999999999999999999999999999987643 3557
Q ss_pred hhheEEEcCCcc--cccccHHHhcccCCC---CC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 740 RKILGIIPQSPV--LFSGTVRFNLDPFSE---HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 740 r~~i~~v~Q~~~--lf~~tv~~nl~~~~~---~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
|+.+||+||+|. ++..|+.+|+.+... .. ++++.++++.+++. ........+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~-----------~~~~~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMY-----------EYRRHAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCH-----------hHhhCCcccCCHHHHHH
Confidence 889999999984 666689999975321 11 12344444444444 44444557899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHh
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
++|||||+.+|++|||||||++||+.++..+.+.|+++. .+.|||++||+++++..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999874 378999999999998779999999999999999999987
Q ss_pred hc
Q 001580 889 SN 890 (1050)
Q Consensus 889 ~~ 890 (1050)
.+
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 54
No 247
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=361.34 Aligned_cols=219 Identities=21% Similarity=0.377 Sum_probs=182.3
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc--C---CccEEEECCeecCCC--Ch
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE--L---ERGRILIDGFDIAKF--GL 736 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~--p---~~G~i~~~g~~i~~~--~~ 736 (1050)
+.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.++|.++... ..
T Consensus 3 ~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 80 (252)
T PRK14256 3 NKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDP 80 (252)
T ss_pred cEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCCh
Confidence 45999999999974 369999999999999999999999999999999999986 4 689999999998653 34
Q ss_pred HHHhhheEEEcCCccccc-ccHHHhcccCC---C-CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhH
Q 001580 737 MDLRKILGIIPQSPVLFS-GTVRFNLDPFS---E-HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQ 807 (1050)
Q Consensus 737 ~~~r~~i~~v~Q~~~lf~-~tv~~nl~~~~---~-~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq 807 (1050)
..+|+.++|+||++.+|. .|+++|+.+.. . ... +++.++++..++...+ .......+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~ 153 (252)
T PRK14256 81 VSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEV-------KDRLKSNAMELSGGQ 153 (252)
T ss_pred HHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcCcCCHHH
Confidence 467888999999999887 59999996421 1 111 2233334443332211 123345667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 001580 808 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 886 (1050)
Q Consensus 808 ~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 886 (1050)
|||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|||++||+++++.. ||++++|++|++++.|++++
T Consensus 154 ~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14256 154 QQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKK 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999999866 99999999999999999999
Q ss_pred HhhcC
Q 001580 887 LLSNE 891 (1050)
Q Consensus 887 l~~~~ 891 (1050)
+....
T Consensus 234 ~~~~~ 238 (252)
T PRK14256 234 IFTTP 238 (252)
T ss_pred HHhCC
Confidence 87654
No 248
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-40 Score=363.26 Aligned_cols=218 Identities=25% Similarity=0.437 Sum_probs=184.0
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~--~~~~ 737 (1050)
.|+++|++++|++ +++|+|+||+|.+||++||+||||||||||+++|+|+++ |++|+|.++|.++.. .+..
T Consensus 20 ~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 97 (267)
T PRK14237 20 ALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVY 97 (267)
T ss_pred EEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChH
Confidence 5999999999964 379999999999999999999999999999999999997 589999999999864 2345
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC---C-CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~-~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+|+.|+|+||++.+|..|+++|+.+... . .. .++.++++..++.+.+ +...+..+.+|||||||
T Consensus 98 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G~~q 170 (267)
T PRK14237 98 EMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-------KDDLHKSALTLSGGQQQ 170 (267)
T ss_pred HHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-------hhhhcCCcccCCHHHHH
Confidence 67888999999999998899999975311 1 11 2233334444332221 23456677899999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+++|++|||||||++||+.+...+.+.|+++.++.|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 171 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 171 RLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999998677999999999999866 9999999999999999999997
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
+.+
T Consensus 251 ~~~ 253 (267)
T PRK14237 251 TNP 253 (267)
T ss_pred cCC
Confidence 643
No 249
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=8.9e-41 Score=356.83 Aligned_cols=200 Identities=26% Similarity=0.400 Sum_probs=169.0
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH---HHhhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~---~~r~~ 742 (1050)
++++|++++|+.+ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++.
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999522 3699999999999999999999999999999999999999999999999999876543 36778
Q ss_pred eEEEcCCccccc-ccHHHhcccCC---CCC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 743 LGIIPQSPVLFS-GTVRFNLDPFS---EHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 743 i~~v~Q~~~lf~-~tv~~nl~~~~---~~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
++|+||++.+|. .|+++|+.+.. ... ++++.++++..++.+ .......+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEH-----------KADAFPEQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHHHHH
Confidence 999999999886 59999986421 111 223444444444433 33344468999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCE
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGR 877 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~ 877 (1050)
|||+.+|++|||||||++||+.++..+.+.|+++. +++|+|++||+++++.. ||++++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999864 47999999999999987 99999999985
No 250
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.6e-40 Score=363.27 Aligned_cols=218 Identities=27% Similarity=0.457 Sum_probs=180.1
Q ss_pred EEEEEEEEEeCCC-------CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH
Q 001580 666 IKFEDVVLRYRPE-------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~-------~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~ 738 (1050)
++++||++.|++. .+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999631 246999999999999999999999999999999999999999999999999998766543
Q ss_pred ---HhhheEEEcCCcc--ccc-ccHHHhcccC----CCCCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhH
Q 001580 739 ---LRKILGIIPQSPV--LFS-GTVRFNLDPF----SEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQ 807 (1050)
Q Consensus 739 ---~r~~i~~v~Q~~~--lf~-~tv~~nl~~~----~~~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq 807 (1050)
+|+.|+|+||++. ++. .|+++|+.+. ....... ....+.++++.+ |++ ......+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~--gl~~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESE-----QKARIAELLDMV--GLRSEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHc--CCChhhhhCChhhCCHHH
Confidence 5778999999983 443 5999998531 1111111 011223344443 453 34456677899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecCh
Q 001580 808 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 884 (1050)
Q Consensus 808 ~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 884 (1050)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+ ++|||+|||+++.+.. ||++++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 9999999999999999999999999999999999999998753 7899999999999976 999999999999999999
Q ss_pred hHHhhc
Q 001580 885 EELLSN 890 (1050)
Q Consensus 885 ~el~~~ 890 (1050)
+++...
T Consensus 236 ~~~~~~ 241 (265)
T TIGR02769 236 AQLLSF 241 (265)
T ss_pred HHHcCC
Confidence 999763
No 251
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-40 Score=361.68 Aligned_cols=218 Identities=21% Similarity=0.400 Sum_probs=183.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~--~~~~ 737 (1050)
.|+++||+++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .++.
T Consensus 10 ~l~i~~v~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGSF--LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECCE--EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 48999999999643 69999999999999999999999999999999999986 479999999998853 3455
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC---CC---HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---HS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 811 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~~---~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl 811 (1050)
.+|+.++|+||++.+|..|+.+|+.+... .. ++++.++++.+++.+.+. ......+.+||||||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHHHH
Confidence 67888999999999888899999975321 11 122334445444433322 234556778999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEe---------CCEEEEe
Q 001580 812 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD---------SGRVLEY 881 (1050)
Q Consensus 812 ~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~---------~G~i~~~ 881 (1050)
+|||||+.+|+||||||||++||+.++..+.+.|+++.+++|||++||+++.+.. ||+|++|+ +|++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999998777899999999999877 99999998 8999999
Q ss_pred cChhHHhhcC
Q 001580 882 DTPEELLSNE 891 (1050)
Q Consensus 882 g~~~el~~~~ 891 (1050)
|+++|+.+.+
T Consensus 241 ~~~~~~~~~~ 250 (264)
T PRK14243 241 DRTEKIFNSP 250 (264)
T ss_pred CCHHHHHhCC
Confidence 9999997654
No 252
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=362.37 Aligned_cols=218 Identities=28% Similarity=0.417 Sum_probs=180.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~--~~~~ 737 (1050)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 3899999999964 369999999999999999999999999999999999997 479999999999854 2344
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC---CC-H----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---HS-D----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~~-~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+|+.++|++|++.+|..|+++|+.+... .. . .++.++++..++.. ...........+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWK-------ETKDNLDRNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCc-------chHHHhccChhhCCHHHHH
Confidence 56888999999999998899999974311 11 1 12223333322211 0112345566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+++|++|||||||++||+.+++.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999876 9999999999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
..+
T Consensus 235 ~~~ 237 (251)
T PRK14251 235 IAP 237 (251)
T ss_pred hCC
Confidence 544
No 253
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=366.70 Aligned_cols=212 Identities=26% Similarity=0.433 Sum_probs=177.8
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecC--CCChHHHhhhe
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA--KFGLMDLRKIL 743 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~--~~~~~~~r~~i 743 (1050)
++++||+++|++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+.+
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 789999999964 36999999999999999999999999999999999999999999999999985 23345678889
Q ss_pred EEEcCCcc--cccccHHHhcccCC---CCCHHH----HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 744 GIIPQSPV--LFSGTVRFNLDPFS---EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 744 ~~v~Q~~~--lf~~tv~~nl~~~~---~~~~~~----~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
+|+||++. ++..|+.+|+.+.. .....+ +.++++..+ ++........+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVD-----------AQHFRHQPIQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------CHhHhcCCchhCCHHHHHHHHHH
Confidence 99999985 56668999986421 112222 223333333 33334445678999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|||+.+|+||||||||++||+.++..+.+.|+++. +++|||+|||+++.+.. ||++++|++|++++.|+++++...
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999864 47899999999999976 999999999999999999998653
No 254
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-40 Score=372.52 Aligned_cols=224 Identities=21% Similarity=0.380 Sum_probs=181.5
Q ss_pred EEEEEEEEEeCCCC--CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc----CCccEEEECCeecCCCChHHH
Q 001580 666 IKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE----LERGRILIDGFDIAKFGLMDL 739 (1050)
Q Consensus 666 i~~~~v~~~y~~~~--~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~----p~~G~i~~~g~~i~~~~~~~~ 739 (1050)
++++|+++.|+... ..+|+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++..++...+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 79999999996432 259999999999999999999999999999999999998 489999999999988887665
Q ss_pred hh----heEEEcCCcc--ccc-ccHHHhcc----cCCCCC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCC
Q 001580 740 RK----ILGIIPQSPV--LFS-GTVRFNLD----PFSEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 804 (1050)
Q Consensus 740 r~----~i~~v~Q~~~--lf~-~tv~~nl~----~~~~~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LS 804 (1050)
++ .|+||||++. ++. .|+.+++. ...... .+.+.++++..++.+. ....+..+.+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~--------~~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDP--------ASRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------HHHHhCCchhCC
Confidence 43 6999999984 443 26665542 211111 1223344444333211 123456678899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEe
Q 001580 805 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEY 881 (1050)
Q Consensus 805 gGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~ 881 (1050)
|||||||+|||||+.+|+|||+||||++||+.++..+.+.|+++.+ +.|+|+||||++.+.. ||||++|++|+|++.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998753 7899999999999866 999999999999999
Q ss_pred cChhHHhhcCCChHHH
Q 001580 882 DTPEELLSNEGSSFSK 897 (1050)
Q Consensus 882 g~~~el~~~~~~~~~~ 897 (1050)
|+++++.++....|.+
T Consensus 236 g~~~~~~~~p~hpyt~ 251 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQ 251 (326)
T ss_pred CCHHHHhhCCCChHHH
Confidence 9999998766555554
No 255
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.5e-40 Score=355.09 Aligned_cols=201 Identities=24% Similarity=0.353 Sum_probs=169.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH---HHhhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~---~~r~~ 742 (1050)
++++|++++|+++ +++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...++. .+|+.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4689999999643 3699999999999999999999999999999999999999999999999999776543 46788
Q ss_pred eEEEcCCcccccc-cHHHhcccCC---CCCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 743 LGIIPQSPVLFSG-TVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 743 i~~v~Q~~~lf~~-tv~~nl~~~~---~~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
++|+||++.+|.. |+++|+.+.. .... +++.++++..+ ++........+||||||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVG-----------LSHKHRALPAELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------CHHHhhCChhhcCHHHHHHHHHH
Confidence 9999999998875 9999996431 1111 22333344433 43344445568999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEE
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 878 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 878 (1050)
|||+.+|++|||||||++||+.+++.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999864 47999999999999987 999999999974
No 256
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-40 Score=359.35 Aligned_cols=218 Identities=26% Similarity=0.416 Sum_probs=183.4
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCC-----ccEEEECCeecCCC--ChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAKF--GLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~-----~G~i~~~g~~i~~~--~~~ 737 (1050)
.++++|++++|++ +++|+|+||+|.+|+++||+||||||||||+++|+|+++|+ +|+|.++|.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 4899999999964 36999999999999999999999999999999999999997 69999999988643 345
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC---C-CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~-~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+|+.++|+||++.+|..|+++|+.+... . .. +.+.++++..++.+. +.......+.+|||||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDE-------VKDNLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchh-------hhhHhhCCcccCCHHHHH
Confidence 67888999999999998899999975321 1 11 112223333333222 223456677899999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|||+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999877 8999999999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
..+
T Consensus 235 ~~~ 237 (251)
T PRK14249 235 SRP 237 (251)
T ss_pred hCC
Confidence 654
No 257
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-40 Score=363.41 Aligned_cols=219 Identities=25% Similarity=0.404 Sum_probs=183.2
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCC--CCh
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAK--FGL 736 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~--~~~ 736 (1050)
..++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 23 ~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 23 VVFDTQNLNLWYGED--HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred eEEEEeeeEEEECCc--ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 359999999999743 69999999999999999999999999999999999997 699999999999853 344
Q ss_pred HHHhhheEEEcCCcccccccHHHhcccCC---CCCHH-H----HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHH
Q 001580 737 MDLRKILGIIPQSPVLFSGTVRFNLDPFS---EHSDA-D----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 808 (1050)
Q Consensus 737 ~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~~~~-~----~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~ 808 (1050)
..+++.++|+||++.+|..|+++|+.+.. ...+. . +.++++..++. .++.......+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIW-------DELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc-------chHHHHHhcCcccCCHHHH
Confidence 56788899999999999889999997421 11111 1 12222222111 1333445667789999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 001580 809 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 809 qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 887 (1050)
||++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|++||+++++.. ||++++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999876 999999999999999999998
Q ss_pred hhcC
Q 001580 888 LSNE 891 (1050)
Q Consensus 888 ~~~~ 891 (1050)
...+
T Consensus 254 ~~~~ 257 (271)
T PRK14238 254 FSNP 257 (271)
T ss_pred HcCC
Confidence 7654
No 258
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.5e-40 Score=362.92 Aligned_cols=220 Identities=26% Similarity=0.371 Sum_probs=181.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|+++.|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 2 l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGGR--LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECCE--EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 7899999999643 69999999999999999999999999999999999999999999999999988887777888999
Q ss_pred EcCCcccc-cccHHHhcccCCC-CCHHH-HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 746 IPQSPVLF-SGTVRFNLDPFSE-HSDAD-LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 746 v~Q~~~lf-~~tv~~nl~~~~~-~~~~~-~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
+||++.++ ..|+++|+.+... ..... .........+.+.++.+ |+..........||||||||++||||++.+|+
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEPK 157 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 99998644 5699999965311 00000 00000011223334432 34444555667899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
+|||||||++||+.+...+.+.|++..+ +.|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 158 LLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999998753 7899999999999966 99999999999999999988754
No 259
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=360.93 Aligned_cols=218 Identities=26% Similarity=0.430 Sum_probs=182.1
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCCC--ChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKF--GLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~~--~~~ 737 (1050)
.|+++|+++.|++ .++++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 3899999999964 3699999999999999999999999999999999999984 899999999988653 234
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCC----CCCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFS----EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~----~~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+++.++|+||++.+|..|+++|+.+.. ...+ +.+.++++..++.+.+ +...+....+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-------KSELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-------HHHHhCChhhcCHHHHH
Confidence 5678899999999999899999997421 1111 1233333333332211 23355667889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+.+|+||||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999997778999999999998766 9999999999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
+..
T Consensus 234 ~~~ 236 (250)
T PRK14262 234 ERP 236 (250)
T ss_pred hCC
Confidence 643
No 260
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.1e-39 Score=359.87 Aligned_cols=210 Identities=24% Similarity=0.360 Sum_probs=188.1
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhhe
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKIL 743 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i 743 (1050)
+.|+++|+++.. +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++| .|
T Consensus 38 ~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~i 100 (282)
T cd03291 38 NNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------RI 100 (282)
T ss_pred CeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------EE
Confidence 459999999952 3699999999999999999999999999999999999999999999997 39
Q ss_pred EEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 001580 744 GIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 823 (1050)
Q Consensus 744 ~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~i 823 (1050)
+|+||++.+|..|+++|+.+.......++.++++.+++.+.+..+|.++++.+++.+..||||||||++|||||+.+|++
T Consensus 101 ~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~i 180 (282)
T cd03291 101 SFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADL 180 (282)
T ss_pred EEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999998999999976433334455667777888888999999998888888899999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHH-HHHcCCcEEEEeecCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 001580 824 LVLDEATAAVDVRTDALIQKTI-REEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 824 llLDEpts~LD~~~~~~i~~~l-~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|||||||++||+.++..+.+.+ +....+.|||++||+++.+..||++++|++|++++.|+++++...
T Consensus 181 LiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 248 (282)
T cd03291 181 YLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL 248 (282)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999888754 555568999999999999877999999999999999999998754
No 261
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.2e-40 Score=355.47 Aligned_cols=196 Identities=33% Similarity=0.483 Sum_probs=163.9
Q ss_pred EEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEc
Q 001580 668 FEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIP 747 (1050)
Q Consensus 668 ~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~ 747 (1050)
++|++++|++. ++++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++. .+|+.++|+|
T Consensus 2 ~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v~ 74 (213)
T cd03235 2 VEDLTVSYGGH--PVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYVP 74 (213)
T ss_pred cccceeEECCE--EeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEec
Confidence 67999999643 6999999999999999999999999999999999999999999999998764 4677899999
Q ss_pred CCccc---ccccHHHhcccCCCC-----------CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHH
Q 001580 748 QSPVL---FSGTVRFNLDPFSEH-----------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 748 Q~~~l---f~~tv~~nl~~~~~~-----------~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~l 813 (1050)
|++.+ +..|+++|+.+.... ..+++.++++..+ ++........+||||||||++|
T Consensus 75 q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv~l 143 (213)
T cd03235 75 QRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVG-----------LSELADRQIGELSGGQQQRVLL 143 (213)
T ss_pred cccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcC-----------CHHHHhCCcccCCHHHHHHHHH
Confidence 99876 557999998643211 1122333344433 4444445567899999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++++.. ||++++|++| +++.|
T Consensus 144 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 144 ARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 999999999999999999999999999999999865 57899999999999976 9999999886 55543
No 262
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=373.83 Aligned_cols=211 Identities=22% Similarity=0.349 Sum_probs=176.1
Q ss_pred CCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCCCee----------
Q 001580 38 GLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASA---------- 102 (1050)
Q Consensus 38 ~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~-----~~~g~~~---------- 102 (1050)
....|+++|++|+|+. ..+++|+|+||+|++|+++||+|+||||||||+++|+|+.+ |++|.+.
T Consensus 77 ~~~~i~~~nls~~y~~-~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 77 HANVFEIRNFNFWYMN-RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred cCceEEEEeeEEEecC-CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 3357999999999974 23579999999999999999999999999999999999986 4566532
Q ss_pred ----EEeCcEEEEecCCCCCcccHHHHhccCCCC---C-HHH----HHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCH
Q 001580 103 ----VIRGTVAYVPQVSWIFNATVRDNILFGSAF---E-PAR----YEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 170 (1050)
Q Consensus 103 ----~~~~~i~~v~Q~~~l~~~TV~eni~~g~~~---~-~~~----~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSG 170 (1050)
..++.++||||+|++|+.||+||+.|+..+ . .+. +...++.+++...+ .+.+++++.+|||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l-------~~~~~~~~~~LSg 228 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEV-------KDDLDKAGNALSG 228 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchh-------hhhhhCCcccCCH
Confidence 124579999999999999999999986421 1 221 34455666654333 2467889999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccC
Q 001580 171 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGT 249 (1050)
Q Consensus 171 GqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 249 (1050)
||||||+|||||+.+|+||||||||++||+.+..++.+.+.... +++|+|+|||+++++.. ||||++|++|++++.|+
T Consensus 229 GqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~-~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~ 307 (329)
T PRK14257 229 GQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELK-KKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGE 307 (329)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999888766543 47999999999999987 89999999999999999
Q ss_pred hhhhhcCh
Q 001580 250 FEDLSNNG 257 (1050)
Q Consensus 250 ~~~l~~~~ 257 (1050)
++++...+
T Consensus 308 ~~~l~~~~ 315 (329)
T PRK14257 308 TKTIFIHP 315 (329)
T ss_pred HHHHhcCC
Confidence 99987653
No 263
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-40 Score=359.61 Aligned_cols=218 Identities=24% Similarity=0.386 Sum_probs=182.9
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCCCC--hH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFG--LM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~~~--~~ 737 (1050)
.++++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++...+ ..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 4899999999964 3699999999999999999999999999999999999875 7999999999986532 34
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC---C-CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~-~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
..|+.++|+||++.+|..|+++|+.+... . .. .++.++++.+++.+ ++..........|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWD-------EVKDDLKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCch-------hhhhHhhCCcccCCHHHHH
Confidence 56888999999999998999999975321 1 11 12333444433321 1223345567789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++||||++.+|+||||||||++||+.+...+.+.|+++.++.|+|+|||+++.+.. |||+++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987767999999999999877 9999999999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
...
T Consensus 235 ~~~ 237 (251)
T PRK14270 235 LEP 237 (251)
T ss_pred cCC
Confidence 543
No 264
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2.9e-40 Score=340.45 Aligned_cols=172 Identities=38% Similarity=0.671 Sum_probs=160.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|+....++++++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 46899999997533469999999999999999999999999999999999999999999999999988888888899999
Q ss_pred EcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 001580 746 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 825 (1050)
Q Consensus 746 v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ill 825 (1050)
++|++.+|..|+++|+ ||||||||++||||++.+|++||
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999988999887 99999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhhcCEEEEEeCCEE
Q 001580 826 LDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGRV 878 (1050)
Q Consensus 826 LDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~G~i 878 (1050)
|||||++||+.++..+.+.|+++. +++|+|++||+++++..||++++|++|++
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999998875 47899999999999877999999999974
No 265
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=362.52 Aligned_cols=218 Identities=25% Similarity=0.440 Sum_probs=180.8
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCCCC--hHH
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKFG--LMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~~~--~~~ 738 (1050)
-+++|++++|++ .++|+|+||+|.+||++||+|+||||||||+++|+|+++ |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999964 369999999999999999999999999999999999986 47999999999886543 235
Q ss_pred HhhheEEEcCCcccccccHHHhcccCC---CC--C----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 739 LRKILGIIPQSPVLFSGTVRFNLDPFS---EH--S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~--~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
+|+.++|+||++.+|..|+.+|+.+.. .. . ++++.++++..++.+. +.+.++..+.+|||||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEE-------LGDRLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCch-------hhhHhhcChhhCCHHHHH
Confidence 688899999999999889999986421 11 1 1122333333333221 122445567789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+++|+||||||||++||+.+++.+.+.|+++.+++|+|++||+++++.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988678999999999999876 9999999999999999999997
Q ss_pred hcCC
Q 001580 889 SNEG 892 (1050)
Q Consensus 889 ~~~~ 892 (1050)
..+.
T Consensus 237 ~~~~ 240 (251)
T PRK14244 237 KNPQ 240 (251)
T ss_pred cCCC
Confidence 6543
No 266
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-40 Score=368.81 Aligned_cols=219 Identities=21% Similarity=0.375 Sum_probs=180.6
Q ss_pred ccEEEEEEEEEeCCCC---CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC----C-C
Q 001580 664 GSIKFEDVVLRYRPEL---PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK----F-G 735 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~---~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~----~-~ 735 (1050)
+.|+++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. . +
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 4599999999996432 259999999999999999999999999999999999999999999999998852 1 3
Q ss_pred hHHHhhheEEEcCCc--ccccccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhHHH
Q 001580 736 LMDLRKILGIIPQSP--VLFSGTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 736 ~~~~r~~i~~v~Q~~--~lf~~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~q 809 (1050)
...+|+.|+|+||++ .+|..|+++|+.+... ....+..+ .+.+.++.+ |+. ........+|||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~ll~~~--~L~~~~~~~~~~~LS~Gq~q 157 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYK-----KVPELLKLV--QLPEDYVKRSPFELSGGQKR 157 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhcCChhhCCHHHHH
Confidence 456788899999998 4667799999975311 12222111 122333332 442 3455667789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 886 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 886 (1050)
|++|||||+.+|++|||||||++||+.+++.+++.|+++. .++|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 158 rv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 237 (289)
T PRK13645 158 RVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFE 237 (289)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999998865 37899999999999866 99999999999999999998
Q ss_pred Hhh
Q 001580 887 LLS 889 (1050)
Q Consensus 887 l~~ 889 (1050)
+..
T Consensus 238 ~~~ 240 (289)
T PRK13645 238 IFS 240 (289)
T ss_pred Hhc
Confidence 865
No 267
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-40 Score=361.69 Aligned_cols=221 Identities=24% Similarity=0.362 Sum_probs=184.2
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH-hhhe
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~-r~~i 743 (1050)
.++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++... +..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 4899999999964 369999999999999999999999999999999999999999999999999987776554 4469
Q ss_pred EEEcCCcccccc-cHHHhcccCCCC----------CH-HHHH--HHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFSEH----------SD-ADLW--EALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~~~----------~~-~~~~--~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
+|+||++.+|.. |+++|+.+.... .+ .... .......+.++++.+ |++........+|||||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~q 160 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQR 160 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHHH
Confidence 999999999876 999999753110 00 0000 000111233445543 6666777788899999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 886 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 886 (1050)
|++|||||+.+|++|||||||++||+.++..+.+.|.++.+ ++|||++||+++.+.. ||++++|++|++++.|++++
T Consensus 161 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 240 (255)
T PRK11300 161 RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE 240 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHH
Confidence 99999999999999999999999999999999999988643 7899999999999876 99999999999999999998
Q ss_pred Hhh
Q 001580 887 LLS 889 (1050)
Q Consensus 887 l~~ 889 (1050)
+..
T Consensus 241 ~~~ 243 (255)
T PRK11300 241 IRN 243 (255)
T ss_pred Hhh
Confidence 864
No 268
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-40 Score=358.66 Aligned_cols=217 Identities=26% Similarity=0.401 Sum_probs=182.4
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecC-CCChHH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIA-KFGLMD 738 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~-~~~~~~ 738 (1050)
.++++|+++.|++ +++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++. ..++..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 3889999999974 3699999999999999999999999999999999999986 5999999999985 345567
Q ss_pred HhhheEEEcCCcccccccHHHhcccCCC---CC-H----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 739 LRKILGIIPQSPVLFSGTVRFNLDPFSE---HS-D----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~~-~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
+|+.++|+||++.+|..|+++|+.+... .. + +++.++++..++.+ .+.........+||||||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWD-------EVKDRLKSHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCch-------hhhHHhhcCcccCCHHHHHH
Confidence 7889999999999998999999974311 11 1 12223333333322 12234556677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|||++||+++++.. ||++++|++|++++.|+++++..
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999998777999999999999887 99999999999999999998865
Q ss_pred c
Q 001580 890 N 890 (1050)
Q Consensus 890 ~ 890 (1050)
.
T Consensus 234 ~ 234 (249)
T PRK14253 234 N 234 (249)
T ss_pred C
Confidence 4
No 269
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.7e-40 Score=355.04 Aligned_cols=203 Identities=28% Similarity=0.409 Sum_probs=170.9
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---Hhhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---LRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~r~~ 742 (1050)
++++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... +|+.
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999422 36999999999999999999999999999999999999999999999999998766443 6788
Q ss_pred eEEEcCCcccc-cccHHHhcccCC---CCCHHH----HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 743 LGIIPQSPVLF-SGTVRFNLDPFS---EHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 743 i~~v~Q~~~lf-~~tv~~nl~~~~---~~~~~~----~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
++|+||++.++ ..|+++|+.+.. .....+ +.++++.. |+.........+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKV-----------GLLDKAKNFPIQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHc-----------CChhhhhCCchhCCHHHHHHHHHH
Confidence 99999999875 569999997531 122222 22333333 333344455678999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEE
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 880 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 880 (1050)
||++.+|++|||||||++||+.+++.+.+.|+++. +++|+|++||+++++.. ||+|++|++|+++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999999864 47899999999999987 99999999999864
No 270
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-40 Score=362.62 Aligned_cols=218 Identities=26% Similarity=0.411 Sum_probs=183.3
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCC--CCh
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGL 736 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~--~~~ 736 (1050)
+.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 24 ~~l~~~nl~~~~~~~--~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~ 101 (272)
T PRK14236 24 TALEVRNLNLFYGDK--QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDV 101 (272)
T ss_pred cEEEEEEEEEEECCe--eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCH
Confidence 359999999999643 699999999999999999999999999999999999884 89999999999864 334
Q ss_pred HHHhhheEEEcCCcccccccHHHhcccCC---CC-CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHH
Q 001580 737 MDLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 808 (1050)
Q Consensus 737 ~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~-~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~ 808 (1050)
..+|+.++|+||++.+|..|+++|+.+.. .. .. +.+.++++.+++.+.+ .+..+..+..||||||
T Consensus 102 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 174 (272)
T PRK14236 102 AELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-------KDRLHENAFGLSGGQQ 174 (272)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-------HHHhhCCcccCCHHHH
Confidence 56788999999999999889999996421 11 11 1233333433332211 2345666788999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 001580 809 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 809 qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 887 (1050)
||++|||||+++|+||||||||++||+.++..+.+.|+++.+++|+|++||+++++.. ||+|++|++|++++.|+++++
T Consensus 175 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 175 QRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999876 999999999999999999998
Q ss_pred hhc
Q 001580 888 LSN 890 (1050)
Q Consensus 888 ~~~ 890 (1050)
...
T Consensus 255 ~~~ 257 (272)
T PRK14236 255 FTS 257 (272)
T ss_pred hcC
Confidence 754
No 271
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-40 Score=351.32 Aligned_cols=200 Identities=26% Similarity=0.405 Sum_probs=169.0
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++|++++|++. . .|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 4689999999642 2 39999999999999999999999999999999999999999999999876654 3578999
Q ss_pred EcCCcccccc-cHHHhcccCCC--C-----CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSE--H-----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~--~-----~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+||++.+|.. |+++|+.+... . .++++.++++..++.+. ......+||||||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGL-----------EKRLPGELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHH-----------HhCCcccCCHHHHHHHHHHHHH
Confidence 9999999875 99999974321 1 12234445555444443 3444568999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
+.+|++|||||||++||+.++..+.+.|+++. .++|+|++||+++++.. ||++++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999865 37899999999999977 9999999999998754
No 272
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-40 Score=365.79 Aligned_cols=213 Identities=26% Similarity=0.446 Sum_probs=179.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC--CChHHHhhhe
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK--FGLMDLRKIL 743 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~--~~~~~~r~~i 743 (1050)
++++|++++|++. .++++|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++.|
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 7899999999633 369999999999999999999999999999999999999999999999999852 2334578899
Q ss_pred EEEcCCc--ccccccHHHhcccCC---CCCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 744 GIIPQSP--VLFSGTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 744 ~~v~Q~~--~lf~~tv~~nl~~~~---~~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
+|+||++ .+|..|+.+|+.+.. .... +++.++++.. |+.......+.+||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~-----------~L~~~~~~~~~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAV-----------GMEGFENKPPHHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHC-----------CCchhhcCChhhCCHHHHHHHHHH
Confidence 9999997 467789999996421 1111 1233333333 333344455678999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|||+.+|++|||||||++||+.+...+.+.|+++. .+.|||++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999875 47899999999999876 999999999999999999998753
No 273
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-40 Score=359.72 Aligned_cols=218 Identities=24% Similarity=0.407 Sum_probs=182.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCCC--ChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKF--GLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~~--~~~ 737 (1050)
.|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++... +..
T Consensus 6 ~i~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGEK--HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECCe--eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 48999999999643 699999999999999999999999999999999999763 489999999998765 345
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCCC----CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSEH----SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~----~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
..++.++|+||++.+|..|+++|+.+.... .. ..+.++++..++.+ ++.+..+..+.+|||||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWD-------EVKDRLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCch-------hhHHHhhcChhhCCHHHHH
Confidence 667889999999999988999999753211 11 12223333332211 2234456677889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999976 9999999999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
..+
T Consensus 237 ~~~ 239 (253)
T PRK14261 237 ENP 239 (253)
T ss_pred hCC
Confidence 644
No 274
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4.9e-40 Score=352.06 Aligned_cols=210 Identities=22% Similarity=0.334 Sum_probs=184.5
Q ss_pred EEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCCh----HHHhhh
Q 001580 667 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL----MDLRKI 742 (1050)
Q Consensus 667 ~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~----~~~r~~ 742 (1050)
.+.|+.|+|+++ .++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 467999999754 469999999999999999999999999999999999999999999999998866542 235677
Q ss_pred eEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 743 LGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 743 i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
++|+||++.+|+.|+++|+.+.....+++..++++..++.+.+..+|.|+++.++....+||||||||++||||++.+|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999889999998654444555677788888888888899999998888889999999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHH--HHHHHc-CCcEEEEeecCchhhhhcCEEEEEeCCE
Q 001580 823 ILVLDEATAAVDVRTDALIQK--TIREEF-KSCTMLIIAHRLNTIIDCDRILLLDSGR 877 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~--~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~G~ 877 (1050)
+|||||||++||+.+...+.+ .++... .+.|+|++||+++.+..||++++|++|+
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999998887 455443 3689999999999987899999999874
No 275
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.9e-40 Score=377.63 Aligned_cols=205 Identities=25% Similarity=0.366 Sum_probs=172.0
Q ss_pred CceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCe----ecCCCChHHH---h-hheEEEcCCccc
Q 001580 681 PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGF----DIAKFGLMDL---R-KILGIIPQSPVL 752 (1050)
Q Consensus 681 ~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~----~i~~~~~~~~---r-~~i~~v~Q~~~l 752 (1050)
.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|. ++...+...+ | ++|+|+||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5799999999999999999999999999999999999999999999996 5666665544 3 579999999999
Q ss_pred cc-ccHHHhcccCC---CCCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 001580 753 FS-GTVRFNLDPFS---EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 824 (1050)
Q Consensus 753 f~-~tv~~nl~~~~---~~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~il 824 (1050)
|. .|+++|+.+.. .... +.+.++++.. |++........+||||||||++|||||+.+|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~v-----------gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELV-----------GLAQWADKKPGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 97 59999997532 1111 2233344444 4444445555689999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHH
Q 001580 825 VLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 896 (1050)
Q Consensus 825 lLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 896 (1050)
||||||++||+.++..+++.|.++.+ ++|+|+|||+++++.. ||||++|++|++++.|+++++..++...|.
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~ 261 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYV 261 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHH
Confidence 99999999999999999999988653 7999999999999866 999999999999999999999876544443
No 276
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-40 Score=352.40 Aligned_cols=205 Identities=29% Similarity=0.526 Sum_probs=179.8
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRG 106 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~ 106 (1050)
+.+.++|++|+|+.. .++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+.. .++
T Consensus 2 ~~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~ 79 (235)
T COG1122 2 RMIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQ 79 (235)
T ss_pred ceEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhc
Confidence 468999999999854 68999999999999999999999999999999999999999887632 345
Q ss_pred cEEEEecCC--CCCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHH
Q 001580 107 TVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 177 (1050)
Q Consensus 107 ~i~~v~Q~~--~l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~ 177 (1050)
+||||+|+| ++|..||.|.+.||.. ... .+...+++.+++.+..+..| .+|||||||||+
T Consensus 80 ~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRva 148 (235)
T COG1122 80 KVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVA 148 (235)
T ss_pred ceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHH
Confidence 699999999 6789999999999943 222 34556778888887766655 589999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 178 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 178 LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
||.+|+.+|++||||||||+|||..++++.+.+.++... |+|+|++|||++++.. |||+++|++|+++.+|++.++.+
T Consensus 149 IA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 149 IAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred hhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 999999999999999999999999999999988887665 7899999999999876 89999999999999999888776
Q ss_pred Ch
Q 001580 256 NG 257 (1050)
Q Consensus 256 ~~ 257 (1050)
+.
T Consensus 229 ~~ 230 (235)
T COG1122 229 DA 230 (235)
T ss_pred hh
Confidence 53
No 277
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-40 Score=365.35 Aligned_cols=204 Identities=30% Similarity=0.458 Sum_probs=179.5
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCcEE
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVA 109 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~i~ 109 (1050)
..|+++|+++.|++. .+++++||+|++||+++|+|||||||||||++|+|+.+|++|.+.. .++.||
T Consensus 2 ~~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~ia 78 (338)
T COG3839 2 AELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIA 78 (338)
T ss_pred cEEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEE
Confidence 358999999999742 2999999999999999999999999999999999999999987653 234699
Q ss_pred EEecCCCCC-cccHHHHhccCCCCC-------HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHH
Q 001580 110 YVPQVSWIF-NATVRDNILFGSAFE-------PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 181 (1050)
Q Consensus 110 ~v~Q~~~l~-~~TV~eni~~g~~~~-------~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAra 181 (1050)
+|+|+..|+ ..||+|||.|+.... ..++..+.+..++.+.++..| .+||||||||||||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHHH
Confidence 999999997 679999999995432 356677788889999888877 4899999999999999
Q ss_pred HccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcCh
Q 001580 182 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNNG 257 (1050)
Q Consensus 182 L~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 257 (1050)
|+++|+++|||||+|+||++.+..+...+.+..+ .|.|+|+||||..++.. +|||++|++|+|.+.|++.++..++
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 9999999999999999999999999888877543 48999999999998775 7999999999999999999987653
No 278
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=8.7e-41 Score=435.51 Aligned_cols=224 Identities=25% Similarity=0.384 Sum_probs=191.4
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.|+++|+++.|+++.+++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .....|+.+|
T Consensus 928 ~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~IG 1006 (2272)
T TIGR01257 928 GVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSLG 1006 (2272)
T ss_pred eEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcEE
Confidence 599999999996333479999999999999999999999999999999999999999999999999965 4556788999
Q ss_pred EEcCCcccccc-cHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
||||++.+|.. |++|||.++.. ....+.. ..+.+.++. .|++........+|||||||||+|||||+.+
T Consensus 1007 ~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~-----~~v~~lL~~--vgL~~~~~~~~~~LSGGqKQRLsLArALi~~ 1079 (2272)
T TIGR01257 1007 MCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQ-----LEMEAMLED--TGLHHKRNEEAQDLSGGMQRKLSVAIAFVGD 1079 (2272)
T ss_pred EEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHH--cCCchhhcCChhhCCHHHHHHHHHHHHHHcC
Confidence 99999999875 99999975421 1111111 112334444 3555566677789999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCChHH
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGSSFS 896 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 896 (1050)
|+||||||||+|||+.+++.+++.|++..+|+|||++||++++++. ||||++|++|++++.|++++|+++.+..|.
T Consensus 1080 PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~g~gy~ 1156 (2272)
T TIGR01257 1080 AKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFY 1156 (2272)
T ss_pred CCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhcCCcEE
Confidence 9999999999999999999999999998778999999999999987 999999999999999999999887665443
No 279
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-41 Score=335.31 Aligned_cols=208 Identities=25% Similarity=0.392 Sum_probs=170.8
Q ss_pred CCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCC-----Cee-----------
Q 001580 39 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSD-----ASA----------- 102 (1050)
Q Consensus 39 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g-----~~~----------- 102 (1050)
.+.++++|++++|+ ++.+|+|||++|++++++|++||+||||||||+++........+ .+.
T Consensus 5 ~~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~ 81 (253)
T COG1117 5 IPAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKV 81 (253)
T ss_pred cceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCC
Confidence 35689999999997 46799999999999999999999999999999999998766542 211
Q ss_pred ---EEeCcEEEEecCCCCCcccHHHHhccCCCC---CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHH
Q 001580 103 ---VIRGTVAYVPQVSWIFNATVRDNILFGSAF---EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 172 (1050)
Q Consensus 103 ---~~~~~i~~v~Q~~~l~~~TV~eni~~g~~~---~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGq 172 (1050)
.+|++||+|+|.|.-|..||+|||.+|... .. +.++..++.+.|-+.... .+.+.+..|||||
T Consensus 82 d~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQ 154 (253)
T COG1117 82 DVVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQ 154 (253)
T ss_pred CHHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhH
Confidence 135579999999999999999999998432 11 223444444444332211 2445677899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhc-CEEEEEcCCeEeeccChh
Q 001580 173 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQV-DRIILVHEGMVKEEGTFE 251 (1050)
Q Consensus 173 rqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~-d~i~~l~~G~i~~~g~~~ 251 (1050)
+||++|||||+-+|+|||||||||+|||.+...|.+.+..++ +.-|+|+|||.+..+.++ |+++.+..|++++.|+.+
T Consensus 155 QQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~ 233 (253)
T COG1117 155 QQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTD 233 (253)
T ss_pred HHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHH
Confidence 999999999999999999999999999999999988666554 668999999999998875 999999999999999999
Q ss_pred hhhcCh
Q 001580 252 DLSNNG 257 (1050)
Q Consensus 252 ~l~~~~ 257 (1050)
++..++
T Consensus 234 ~iF~~P 239 (253)
T COG1117 234 KIFTNP 239 (253)
T ss_pred hhhcCc
Confidence 988764
No 280
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5.4e-40 Score=354.29 Aligned_cols=206 Identities=22% Similarity=0.323 Sum_probs=172.3
Q ss_pred cEEEEEEEEEeCCCC--CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---H
Q 001580 665 SIKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L 739 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~--~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~ 739 (1050)
.++++|++++|++.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++.. .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 489999999996432 25999999999999999999999999999999999999999999999999998776543 2
Q ss_pred -hhheEEEcCCcccccc-cHHHhcccC---CCCC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 740 -RKILGIIPQSPVLFSG-TVRFNLDPF---SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 740 -r~~i~~v~Q~~~lf~~-tv~~nl~~~---~~~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
++.++|+||++.+|.. |+.+|+.+. .... .+++.++++..++. .........||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLG-----------KRLDHLPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-----------hHhhCChhhCCHHHHHH
Confidence 3579999999998875 999998642 1111 12233444444443 33444456899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-C-CcEEEEeecCchhhhhcCEEEEEeCCEEEEe
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-K-SCTMLIIAHRLNTIIDCDRILLLDSGRVLEY 881 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~-~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~ 881 (1050)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++. + ++|||++||+++++..||++++|++|++++.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999998864 2 7899999999999877999999999999763
No 281
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-40 Score=352.69 Aligned_cols=204 Identities=25% Similarity=0.466 Sum_probs=171.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|+++.|++ +++++|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++.. ..++.++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 468999999964 369999999999999999999999999999999999999999999999988753 46778999
Q ss_pred EcCCcccccc-cHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.+|.. |+++|+.+... ....+.. ..+.++++.+ |++........+||||||||++||||++.+|
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 147 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHDP 147 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcCC
Confidence 9999998875 99999864311 1111111 1233444443 5555556667789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
++|||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 148 ~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 148 ELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 9999999999999999999999998864 47899999999999876 9999999999998754
No 282
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=352.96 Aligned_cols=208 Identities=26% Similarity=0.381 Sum_probs=176.7
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++||+++|+.. ..|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 7899999999632 239999999999999999999999999999999999999999999999876544 3567999
Q ss_pred EcCCcccccc-cHHHhcccCC-CC------CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFS-EH------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~-~~------~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+||++.+|.. |+.+|+.+.. .. .++++.++++..++.+ .+......||||||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIED-----------LLARLPGQLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHH-----------HHhCCcccCCHHHHHHHHHHHHH
Confidence 9999998875 9999997421 11 1223444555544444 34444568999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
+++|++|||||||++||+.+++.+.+.|+++.+ ++|+|++||+++++.. ||++++|++|++++.|+++++...
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999998643 7899999999999876 999999999999999999998753
No 283
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.4e-40 Score=353.22 Aligned_cols=204 Identities=26% Similarity=0.441 Sum_probs=170.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC--CChHHHhhhe
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK--FGLMDLRKIL 743 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~--~~~~~~r~~i 743 (1050)
++++||+++|++. ++++++||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++.+
T Consensus 1 l~~~~l~~~~~~~--~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGDF--HVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECCe--EeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 4689999999653 69999999999999999999999999999999999999999999999998853 3445678899
Q ss_pred EEEcCCccccc-ccHHHhcccCC----CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHc
Q 001580 744 GIIPQSPVLFS-GTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALL 818 (1050)
Q Consensus 744 ~~v~Q~~~lf~-~tv~~nl~~~~----~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall 818 (1050)
+|+||++.+|. .|+++|+.+.. .....+.. ..+.+.++.+ |++........+||||||||++||||++
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~ 151 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAE-----ERALELLEKV--GLADKADAYPAQLSGGQQQRVAIARALA 151 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHHh
Confidence 99999999886 59999996531 11111111 1123334442 5555566667889999999999999999
Q ss_pred cCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEE
Q 001580 819 RRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 878 (1050)
Q Consensus 819 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 878 (1050)
.+|++|||||||++||+.+++.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 152 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 152 MNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999875 47899999999999976 999999999974
No 284
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=361.53 Aligned_cols=219 Identities=26% Similarity=0.439 Sum_probs=181.9
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCCC--Ch
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF--GL 736 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~~--~~ 736 (1050)
..|+++|++++|+.. ++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++... ++
T Consensus 38 ~~l~i~~l~~~~~~~--~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGDE--QALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECCE--eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 358999999999643 69999999999999999999999999999999999997 6899999999998643 44
Q ss_pred HHHhhheEEEcCCcccccccHHHhcccCCC---CC---HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 737 MDLRKILGIIPQSPVLFSGTVRFNLDPFSE---HS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 737 ~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~~---~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
..+++.++|+||++.+|..|+.+|+.+... .. ++++.++++..++...+ .......+.+||||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LSgGe~qr 188 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEV-------KDQLDSSGLDLSGGQQQR 188 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchh-------HHHHhCCcccCCHHHHHH
Confidence 567889999999999888899999964211 11 22233344443332111 223456677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEE-EEeCCEEEEecChhHHh
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRIL-LLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~-vl~~G~i~~~g~~~el~ 888 (1050)
++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. |||++ +|++|++++.|+++++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998767899999999999877 99976 56999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
++.
T Consensus 269 ~~~ 271 (285)
T PRK14254 269 ENP 271 (285)
T ss_pred hCc
Confidence 543
No 285
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-40 Score=359.68 Aligned_cols=218 Identities=26% Similarity=0.397 Sum_probs=183.0
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~--~~~~ 737 (1050)
.++++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++.. ....
T Consensus 7 ~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (259)
T PRK14260 7 AIKVKDLSFYYNTS--KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININ 84 (259)
T ss_pred eEEEEEEEEEECCe--EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchH
Confidence 48999999999643 699999999999999999999999999999999999985 48999999998864 3345
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCC----CCCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFS----EHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~----~~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+++.++|+||++.+|..|+++|+.+.. ...+ +.+.++++.+++.+.+ .......+..|||||||
T Consensus 85 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~q 157 (259)
T PRK14260 85 RLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-------KDKLNKSALGLSGGQQQ 157 (259)
T ss_pred hhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHHHH
Confidence 6788899999999999899999996421 1111 2233444444443222 22345566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEe-----CCEEEEecC
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD-----SGRVLEYDT 883 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~-----~G~i~~~g~ 883 (1050)
|++|||||+++|++|||||||++||+.+...+++.|+++.+++|+|++||+++++.. ||++++|+ +|++++.|+
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~ 237 (259)
T PRK14260 158 RLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGV 237 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCC
Confidence 999999999999999999999999999999999999997777999999999999877 99999998 599999999
Q ss_pred hhHHhhcC
Q 001580 884 PEELLSNE 891 (1050)
Q Consensus 884 ~~el~~~~ 891 (1050)
++++.+.+
T Consensus 238 ~~~~~~~~ 245 (259)
T PRK14260 238 TTQIFSNP 245 (259)
T ss_pred HHHHhcCC
Confidence 99987654
No 286
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4.5e-40 Score=353.77 Aligned_cols=210 Identities=24% Similarity=0.336 Sum_probs=178.2
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.|+++|+++.|++. ++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++..+++.++
T Consensus 7 ~i~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGDA--KILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCCc--eeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 48999999999643 6999999999999999999999999999999999999999999999999998888777888999
Q ss_pred EEcCCcccccccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 745 IIPQSPVLFSGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 745 ~v~Q~~~lf~~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
|+||++.+|..|+++|+.+.. .....+ ..+.++++.+ |+. +.....+.+||||||||++|||||+++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~-------~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDP-------AIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQFM 155 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHH-------HHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999889999996421 111100 1122344443 443 445667789999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhhcCEEEEEe-CCEEEEecChh
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLD-SGRVLEYDTPE 885 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~-~G~i~~~g~~~ 885 (1050)
|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++++..||++++|+ ++..+++|+|+
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 156 PKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999999864 3789999999999997899999995 66667778765
No 287
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-40 Score=359.28 Aligned_cols=217 Identities=26% Similarity=0.453 Sum_probs=180.4
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~--~~~~ 737 (1050)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGSF--HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECCE--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 38999999999643 699999999999999999999999999999999999974 69999999999853 3455
Q ss_pred HHhhheEEEcCCcccccc-cHHHhcccCC---C-CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHH
Q 001580 738 DLRKILGIIPQSPVLFSG-TVRFNLDPFS---E-HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQR 808 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~-tv~~nl~~~~---~-~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~ 808 (1050)
.+|+.++|+||++.+|.. |+++|+.+.. . ... +.+.++++..++.+. +.........+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNE-------VKDRLDKPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchh-------hhhHhhCCcccCCHHHH
Confidence 678889999999998874 9999986421 1 111 122333333333211 12344566678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEe------CCEEEEe
Q 001580 809 QLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD------SGRVLEY 881 (1050)
Q Consensus 809 qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~------~G~i~~~ 881 (1050)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++++.. ||+|++|+ +|+|++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 9999999999999999999999999999999999999987667899999999999866 99999997 7999999
Q ss_pred cChhHHhhc
Q 001580 882 DTPEELLSN 890 (1050)
Q Consensus 882 g~~~el~~~ 890 (1050)
|+++++...
T Consensus 235 ~~~~~~~~~ 243 (258)
T PRK14241 235 DDTEKIFSN 243 (258)
T ss_pred CCHHHHHhC
Confidence 999998764
No 288
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-40 Score=360.55 Aligned_cols=257 Identities=31% Similarity=0.524 Sum_probs=222.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhh-cccCCC-CCCCCC-CCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCc
Q 001580 6 WQVVNANVSLKRMEEFLLAEE-KILLPN-PPLTSG-LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEG 82 (1050)
Q Consensus 6 ~~~~~a~~s~~Ri~~fl~~~e-~~~~~~-~~~~~~-~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsG 82 (1050)
..+-++..-+++.-+.+..+- ..+.|+ |++.+. .-.+.|.|++|.|+ +.+++|+++||.+++|+.+++||++|+|
T Consensus 224 rei~q~ltdme~mfdLl~~~~~v~d~pda~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~g 301 (497)
T COG5265 224 REIRQALTDMEKMFDLLDVEAEVSDAPDAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAG 301 (497)
T ss_pred HHHHHhhhhHHHHHHhhccchhhccCCCCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCc
Confidence 445566666666666666553 223333 233321 22489999999997 4689999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCCC-CHHHHHHHHHHhCcHHH
Q 001580 83 KTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSAF-EPARYEKAIDVTSLQHD 149 (1050)
Q Consensus 83 KSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~~-~~~~~~~~~~~~~l~~~ 149 (1050)
|||++++|..++++.+|.+.. .++.||+|||+..||+.|+..||.+|.+. ..++...+.+.+++...
T Consensus 302 KsTI~rllfRFyD~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~f 381 (497)
T COG5265 302 KSTILRLLFRFYDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDF 381 (497)
T ss_pred HHHHHHHHHHHhCCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHH
Confidence 999999999999999987654 23459999999999999999999999753 45677788999999999
Q ss_pred HhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcch
Q 001580 150 LDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHF 229 (1050)
Q Consensus 150 ~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~ 229 (1050)
+..+|.|++|.|||+|-.||||+||||++||+++.+|+||+|||.||+||.++++.|...+.+ ..+|+|.++|.|+++.
T Consensus 382 i~~lP~gy~t~VgerglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~-~~~~rttlviahrlst 460 (497)
T COG5265 382 IQSLPEGYDTGVGERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALRE-VSAGRTTLVIAHRLST 460 (497)
T ss_pred HHhCchhhhcccchheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHH-HhCCCeEEEEeehhhh
Confidence 999999999999999999999999999999999999999999999999999999999887654 3478999999999999
Q ss_pred hhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHHH
Q 001580 230 LSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLME 265 (1050)
Q Consensus 230 l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 265 (1050)
+-.||.|+||++|+|+|.|++++++..++.|+.++.
T Consensus 461 i~~adeiivl~~g~i~erg~h~~ll~~~g~ya~mw~ 496 (497)
T COG5265 461 IIDADEIIVLDNGRIVERGTHEELLAAGGLYAEMWR 496 (497)
T ss_pred ccCCceEEEeeCCEEEecCcHHHHHHcCChHHHHhc
Confidence 999999999999999999999999999999998874
No 289
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-40 Score=355.68 Aligned_cols=210 Identities=27% Similarity=0.406 Sum_probs=178.8
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++|++++|+.. ++++|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 l~~~~l~~~~~~~--~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGGF--VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 4689999999753 69999999999999999999999999999999999999999999999999976554 3678999
Q ss_pred EcCCcccccc-cHHHhcccCCC---CC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSE---HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~---~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+||++.+|.+ |+++|+.+... .. ++++.++++.. |++.........||||||||++|||||
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLV-----------QLEGYANRKPSQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 9999999865 99999864211 11 12233333333 444445555578999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
+.+|++|||||||++||+.+++.+++.|+++.+ ++|+|++||+++++.. ||++++|++|++++.|+++++...
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999999999999999999999998753 7999999999999876 999999999999999999988754
No 290
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=7.7e-40 Score=369.50 Aligned_cols=226 Identities=25% Similarity=0.408 Sum_probs=184.0
Q ss_pred cEEEEEEEEEeCC--CCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCC---ccEEEECCeecCCCChHHH
Q 001580 665 SIKFEDVVLRYRP--ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE---RGRILIDGFDIAKFGLMDL 739 (1050)
Q Consensus 665 ~i~~~~v~~~y~~--~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~---~G~i~~~g~~i~~~~~~~~ 739 (1050)
.++++|++++|+. +..++|+||||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++..++..++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 4899999999953 2236999999999999999999999999999999999999996 9999999999998887665
Q ss_pred h----hheEEEcCCc--cccc-ccHHHhcc----cCCCCCHHH----HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCC
Q 001580 740 R----KILGIIPQSP--VLFS-GTVRFNLD----PFSEHSDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFS 804 (1050)
Q Consensus 740 r----~~i~~v~Q~~--~lf~-~tv~~nl~----~~~~~~~~~----~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LS 804 (1050)
+ +.|+||||++ .++. .|+.+|+. .....+..+ +.+.++..++ +.+. ..++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL-------~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKM-------PEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-------CChH-HHhcCCcccCC
Confidence 3 4799999998 4554 37777663 221122222 2222232222 2211 23566778999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEe
Q 001580 805 VGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEY 881 (1050)
Q Consensus 805 gGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~ 881 (1050)
||||||++|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+||||++.+.. ||||+||++|+|++.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999988754 7899999999999976 999999999999999
Q ss_pred cChhHHhhcCCChHHHH
Q 001580 882 DTPEELLSNEGSSFSKM 898 (1050)
Q Consensus 882 g~~~el~~~~~~~~~~~ 898 (1050)
|+++++.+.+...|.+.
T Consensus 244 g~~~~i~~~p~~pyt~~ 260 (330)
T PRK09473 244 GNARDVFYQPSHPYSIG 260 (330)
T ss_pred CCHHHHHhCCCCHHHHH
Confidence 99999998765556543
No 291
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=9.5e-40 Score=354.08 Aligned_cols=214 Identities=25% Similarity=0.446 Sum_probs=180.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++. ++|+|+||++.+||++||+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|
T Consensus 1 i~i~~l~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGSF--QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECCe--eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 4689999999753 69999999999999999999999999999999999999999999999999876543 4678999
Q ss_pred EcCCcccccc-cHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.+|.. |+++|+.+... ...... ...+.+.++.+ ++.........+|||||+||++|||||+++|
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~p 149 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKI-----KARVEELLELV--QLEGLGDRYPNQLSGGQRQRVALARALAVEP 149 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999999975 99999974321 111111 11223444443 3334445556789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
+++||||||++||+.+++.+++.|++..+ ++|+|++||+++++.. ||++++|++|++++.|++++++..
T Consensus 150 ~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 150 QVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999998654 7899999999999876 999999999999999999999754
No 292
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=357.06 Aligned_cols=218 Identities=23% Similarity=0.409 Sum_probs=184.2
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCCC--ChHH
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF--GLMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~~--~~~~ 738 (1050)
++++||++.|++ .++|+|+||+|++||++||+||||||||||+++|+|+.+ |++|+|.++|.++... +...
T Consensus 4 l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 81 (250)
T PRK14266 4 IEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVE 81 (250)
T ss_pred EEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHH
Confidence 789999999964 369999999999999999999999999999999999874 4899999999998653 3456
Q ss_pred HhhheEEEcCCcccccccHHHhcccCC---CC-CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 739 LRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~-~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
+++.++|+||++.+|..|+.+|+.+.. .. .. +.+.++++.+++.+.+. ...+..+..||||||||
T Consensus 82 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~qr 154 (250)
T PRK14266 82 LRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-------DKLDKSALGLSGGQQQR 154 (250)
T ss_pred HhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-------HHHhCCcccCCHHHHHH
Confidence 788999999999999889999997421 11 11 22344455555543332 22455667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++++.. ||++++|++|++++.|+++++..
T Consensus 155 v~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14266 155 LCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIFI 234 (250)
T ss_pred HHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999998778999999999999877 99999999999999999999976
Q ss_pred cCC
Q 001580 890 NEG 892 (1050)
Q Consensus 890 ~~~ 892 (1050)
.+.
T Consensus 235 ~~~ 237 (250)
T PRK14266 235 NPK 237 (250)
T ss_pred CCC
Confidence 543
No 293
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.8e-39 Score=356.58 Aligned_cols=218 Identities=24% Similarity=0.406 Sum_probs=181.1
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCee-----cCCCChHHH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFD-----IAKFGLMDL 739 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~-----i~~~~~~~~ 739 (1050)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.+ +...+...+
T Consensus 6 ~l~~~~l~~~~~~~--~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGPR--KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCCc--eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 48999999999643 69999999999999999999999999999999999999999999999998 776665442
Q ss_pred ----hhheEEEcCCcc--ccc-ccHHHhccc----CCCCCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhH
Q 001580 740 ----RKILGIIPQSPV--LFS-GTVRFNLDP----FSEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQ 807 (1050)
Q Consensus 740 ----r~~i~~v~Q~~~--lf~-~tv~~nl~~----~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq 807 (1050)
++.++|+||++. ++. .|+.+|+.. +......+.. ..+.++++.+ |++ +..+..+.+|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~Gq 156 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERV--EIDAARIDDLPTTFSGGM 156 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHc--CCChhHHhCCCccCCHHH
Confidence 557999999984 333 378887742 1111111111 1234556665 343 45677888999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecCh
Q 001580 808 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 884 (1050)
Q Consensus 808 ~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 884 (1050)
|||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ +.|+|+|||+++++.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~ 236 (258)
T PRK11701 157 QQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLT 236 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999988643 7899999999999986 999999999999999999
Q ss_pred hHHhhcC
Q 001580 885 EELLSNE 891 (1050)
Q Consensus 885 ~el~~~~ 891 (1050)
+++....
T Consensus 237 ~~~~~~~ 243 (258)
T PRK11701 237 DQVLDDP 243 (258)
T ss_pred HHHhcCC
Confidence 9987654
No 294
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=358.62 Aligned_cols=220 Identities=26% Similarity=0.405 Sum_probs=183.3
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCCCC-hHH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFG-LMD 738 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~~~-~~~ 738 (1050)
.++++||+++|+.. ++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+ ...
T Consensus 21 ~l~i~nl~~~~~~~--~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAGK--TVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECCE--EEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 48999999999743 699999999999999999999999999999999999986 6999999999987653 346
Q ss_pred HhhheEEEcCCcccccccHHHhcccCC---C-CCHHHHHHHHHHhcHHHHHHHc--cCCcchhhhcCCCCCChhHHHHHH
Q 001580 739 LRKILGIIPQSPVLFSGTVRFNLDPFS---E-HSDADLWEALERAHLKDAIRRN--SLGLDAQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~-~~~~~~~~~l~~~~~~~~i~~~--p~gl~t~v~~~~~~LSgGq~qrl~ 812 (1050)
+|+.++|+||++.+|..|+++|+.+.. . .+..+..+. +.+.++.+ ...+.+.....+.+||||||||++
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGV-----AQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLC 173 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHH
Confidence 788999999999999899999997431 1 122222211 11222222 111223455667889999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNE 891 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~ 891 (1050)
|||||+.+|+||||||||++||+.+++.+.+.|+++.+++|||+|||+++++.. |||+++|++|++++.|+++++.+.+
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 253 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSP 253 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999999987667899999999999876 9999999999999999999997654
No 295
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-40 Score=370.25 Aligned_cols=224 Identities=21% Similarity=0.359 Sum_probs=181.3
Q ss_pred EEEEEEEEEeCC--CCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc----CCccEEEECCeecCCCChHHH
Q 001580 666 IKFEDVVLRYRP--ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE----LERGRILIDGFDIAKFGLMDL 739 (1050)
Q Consensus 666 i~~~~v~~~y~~--~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~----p~~G~i~~~g~~i~~~~~~~~ 739 (1050)
++++|++++|+. +...+|+||||+|.+||++||+|+||||||||+++|+|+++ |++|+|.++|+++.+.+...+
T Consensus 4 L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (330)
T PRK15093 4 LDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRER 83 (330)
T ss_pred EEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 899999999952 22369999999999999999999999999999999999986 589999999999988877654
Q ss_pred h----hheEEEcCCcc--ccc-ccHHHhcccC------CC--CC-----HHHHHHHHHHhcHHHHHHHccCCcchhhhcC
Q 001580 740 R----KILGIIPQSPV--LFS-GTVRFNLDPF------SE--HS-----DADLWEALERAHLKDAIRRNSLGLDAQVSEA 799 (1050)
Q Consensus 740 r----~~i~~v~Q~~~--lf~-~tv~~nl~~~------~~--~~-----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~ 799 (1050)
+ +.|+||||++. ++. .||.+|+... .. .. .+++.++++..++.+. .......
T Consensus 84 ~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~--------~~~~~~~ 155 (330)
T PRK15093 84 RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDH--------KDAMRSF 155 (330)
T ss_pred HHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCCh--------HHHHhCC
Confidence 3 46999999996 333 3888887421 00 00 1223333444333211 1223455
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCC
Q 001580 800 GENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSG 876 (1050)
Q Consensus 800 ~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G 876 (1050)
+.+|||||||||+|||||+.+|+||||||||++||+.++..+.+.|+++.+ +.|+|+||||++.+.. ||||++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 678999999999999999999999999999999999999999999998753 7899999999999977 9999999999
Q ss_pred EEEEecChhHHhhcCCChHHH
Q 001580 877 RVLEYDTPEELLSNEGSSFSK 897 (1050)
Q Consensus 877 ~i~~~g~~~el~~~~~~~~~~ 897 (1050)
+|++.|+++++..++...|.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHH
Confidence 999999999998765545544
No 296
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=358.73 Aligned_cols=218 Identities=23% Similarity=0.410 Sum_probs=182.7
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~--~~~~ 737 (1050)
.|+++|++++|+.. ++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. ....
T Consensus 20 ~l~~~nl~~~~~~~--~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~ 97 (274)
T PRK14265 20 VFEVEGVKVFYGGF--LALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSV 97 (274)
T ss_pred eEEEeeEEEEeCCe--EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhH
Confidence 59999999999743 699999999999999999999999999999999999864 68999999999864 2334
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC---C---CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 811 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~---~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl 811 (1050)
.+|+.|+|+||++.+|..|+.+|+.+... . .++.+.++++.+++...+ .......+..||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qrv 170 (274)
T PRK14265 98 KLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-------KDKLKEKGTALSGGQQQRL 170 (274)
T ss_pred HHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-------HHHhcCCcccCCHHHHHHH
Confidence 56889999999999998899999975321 1 122233344444443222 2234556678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEe---------CCEEEEe
Q 001580 812 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD---------SGRVLEY 881 (1050)
Q Consensus 812 ~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~---------~G~i~~~ 881 (1050)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+++|||++||+++++.. ||++++|+ +|++++.
T Consensus 171 ~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~ 250 (274)
T PRK14265 171 CIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEF 250 (274)
T ss_pred HHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999998778999999999999976 99999998 8999999
Q ss_pred cChhHHhhcC
Q 001580 882 DTPEELLSNE 891 (1050)
Q Consensus 882 g~~~el~~~~ 891 (1050)
|+++++...+
T Consensus 251 g~~~~~~~~~ 260 (274)
T PRK14265 251 SPTEQMFGSP 260 (274)
T ss_pred CCHHHHHhCC
Confidence 9999997654
No 297
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.1e-39 Score=359.72 Aligned_cols=217 Identities=23% Similarity=0.360 Sum_probs=178.1
Q ss_pred cEEEEEEEEEeCCC-------CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH
Q 001580 665 SIKFEDVVLRYRPE-------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~-------~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~ 737 (1050)
.|+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 38999999999521 23699999999999999999999999999999999999999999999999998755555
Q ss_pred HHhhheEEEcCCcc--cccc-cHHHhcccC----CCCC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChh
Q 001580 738 DLRKILGIIPQSPV--LFSG-TVRFNLDPF----SEHS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVG 806 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~--lf~~-tv~~nl~~~----~~~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgG 806 (1050)
..++.++|+||++. ++.. |+.+|+.+. .... .+++.++++.+++. .........+||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G 153 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLL----------PDHASYYPHMLAPG 153 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCC----------hHHHhcCchhcCHH
Confidence 55678999999985 4443 888887531 1111 12233444444431 12223345689999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecC
Q 001580 807 QRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 883 (1050)
Q Consensus 807 q~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~ 883 (1050)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. .+.|||++||+++.+.. ||++++|++|++++.|+
T Consensus 154 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 233 (267)
T PRK15112 154 QKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGS 233 (267)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCC
Confidence 9999999999999999999999999999999999999999875 37899999999999987 99999999999999999
Q ss_pred hhHHhhcC
Q 001580 884 PEELLSNE 891 (1050)
Q Consensus 884 ~~el~~~~ 891 (1050)
++++...+
T Consensus 234 ~~~~~~~~ 241 (267)
T PRK15112 234 TADVLASP 241 (267)
T ss_pred HHHHhcCC
Confidence 99998654
No 298
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=358.73 Aligned_cols=220 Identities=22% Similarity=0.349 Sum_probs=184.5
Q ss_pred CccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecC----C
Q 001580 663 SGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIA----K 733 (1050)
Q Consensus 663 ~~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~----~ 733 (1050)
.+.|+++|++++|++. ++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++. .
T Consensus 14 ~~~l~~~~l~~~~~~~--~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~ 91 (265)
T PRK14252 14 QQKSEVNKLNFYYGGY--QALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPE 91 (265)
T ss_pred CceEEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccccc
Confidence 4569999999999743 699999999999999999999999999999999999985 7999999998774 2
Q ss_pred CChHHHhhheEEEcCCcccccccHHHhcccCC---CC-----CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCCh
Q 001580 734 FGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSV 805 (1050)
Q Consensus 734 ~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~-----~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSg 805 (1050)
.....+++.++|+||++.+|..|+++|+.+.. .. .++++.++++.+++.+ ++.+..+.....|||
T Consensus 92 ~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~ 164 (265)
T PRK14252 92 VDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-------EVKDRLGDLAFNLSG 164 (265)
T ss_pred cCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-------hhhHHHhCCcccCCH
Confidence 23456788899999999999889999996431 11 1223344444443322 233445666788999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecCh
Q 001580 806 GQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 884 (1050)
Q Consensus 806 Gq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 884 (1050)
|||||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++++.. ||++++|++|++++.|++
T Consensus 165 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~~ 244 (265)
T PRK14252 165 GQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGAT 244 (265)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987767899999999999976 999999999999999999
Q ss_pred hHHhhcC
Q 001580 885 EELLSNE 891 (1050)
Q Consensus 885 ~el~~~~ 891 (1050)
+++....
T Consensus 245 ~~~~~~~ 251 (265)
T PRK14252 245 DTIFIKP 251 (265)
T ss_pred HHHHhCC
Confidence 9987543
No 299
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=362.43 Aligned_cols=219 Identities=25% Similarity=0.354 Sum_probs=181.5
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCCC--ChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF--GLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~~--~~~ 737 (1050)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+.+ |++|+|.++|.++... +..
T Consensus 39 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~~ 116 (286)
T PRK14275 39 HVVAKNFSIYYGEF--EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDEV 116 (286)
T ss_pred EEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccchH
Confidence 58999999999643 69999999999999999999999999999999999864 4999999999988643 233
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC---C-CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~-~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+|+.++|+||++.+|..|+++|+.+... . .. +.+.++++..++.+ ++..........|||||||
T Consensus 117 ~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgGq~q 189 (286)
T PRK14275 117 LLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWD-------EVSDRLDKNALGLSGGQQQ 189 (286)
T ss_pred HhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCcc-------chhhHhhCChhhCCHHHHH
Confidence 56888999999999998899999975311 1 11 12223333333211 1123345566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+.+|++|||||||++||+.+...+.+.|+++..++|||++||+++++.. ||++++|++|++++.|+++++.
T Consensus 190 rv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 190 RLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999876 9999999999999999999987
Q ss_pred hcCC
Q 001580 889 SNEG 892 (1050)
Q Consensus 889 ~~~~ 892 (1050)
+++.
T Consensus 270 ~~~~ 273 (286)
T PRK14275 270 TNPK 273 (286)
T ss_pred hCCC
Confidence 6543
No 300
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-40 Score=349.13 Aligned_cols=203 Identities=31% Similarity=0.466 Sum_probs=174.4
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------------eCc
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGT 107 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~ 107 (1050)
.|.++|+++.|++ .++++||||+|+.||.+|+.|||||||||||++|+|+..|+.|.+... .++
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~ 78 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRK 78 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcc
Confidence 4789999999974 468999999999999999999999999999999999999999876431 235
Q ss_pred EEEEecCCCCC-cccHHHHhccCCCCC---------HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHH
Q 001580 108 VAYVPQVSWIF-NATVRDNILFGSAFE---------PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 177 (1050)
Q Consensus 108 i~~v~Q~~~l~-~~TV~eni~~g~~~~---------~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~ 177 (1050)
||+|+|+..+| ..||.+||.||.... ..++.+.++.++|...-+..| .+||||||||||
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHHH
Confidence 99999999987 789999999996322 234445566777766666555 589999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccc-cCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 178 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 178 LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~-~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
|||||+.+|+|||||||+++||++.+..+...|.+.. +.|.|+|+||||.+++.. +|||++|++|+|...|+++|+..
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 9999999999999999999999999999988887754 348999999999999765 79999999999999999999875
Q ss_pred Ch
Q 001580 256 NG 257 (1050)
Q Consensus 256 ~~ 257 (1050)
.+
T Consensus 228 ~P 229 (345)
T COG1118 228 HP 229 (345)
T ss_pred CC
Confidence 53
No 301
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=356.86 Aligned_cols=218 Identities=23% Similarity=0.336 Sum_probs=184.5
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCCC--ChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKF--GLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~~--~~~ 737 (1050)
.+.++++++.|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++... ...
T Consensus 8 ~~~~~~~~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGNF--MAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 38999999999643 699999999999999999999999999999999999987 799999999998643 334
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCC---C---CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE---H---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLL 811 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~---~---~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl 811 (1050)
.+|+.++|+||++.+|..|+.+|+.+... . ..+++.++++.+++...+. ...++...+|||||+||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVK-------DKLKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHHHHH
Confidence 56788999999999998899999975321 1 1234455555555433322 233456678999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEe--------CCEEEEec
Q 001580 812 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLD--------SGRVLEYD 882 (1050)
Q Consensus 812 ~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~--------~G~i~~~g 882 (1050)
+|||||+++|++|||||||++||+.++..+.+.|+++.+++|+|++||+++++.. ||||++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999998677899999999999876 99999996 89999999
Q ss_pred ChhHHhhcC
Q 001580 883 TPEELLSNE 891 (1050)
Q Consensus 883 ~~~el~~~~ 891 (1050)
+++++.+..
T Consensus 239 ~~~~~~~~~ 247 (261)
T PRK14263 239 PTAQIFQNP 247 (261)
T ss_pred CHHHHHhCC
Confidence 999997643
No 302
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=355.55 Aligned_cols=218 Identities=26% Similarity=0.416 Sum_probs=180.2
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCC-----ccEEEECCeecCC--CChHH
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAK--FGLMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~-----~G~i~~~g~~i~~--~~~~~ 738 (1050)
++++|++++|++. ++++|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.++|.++.. .+...
T Consensus 5 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 82 (252)
T PRK14272 5 LSAQDVNIYYGDK--QAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVA 82 (252)
T ss_pred EEEeeeEEEECCE--EeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHH
Confidence 7899999999643 6999999999999999999999999999999999999874 8999999999864 33456
Q ss_pred HhhheEEEcCCcccccc-cHHHhcccCC---CC-CHHHHHHH----HHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 739 LRKILGIIPQSPVLFSG-TVRFNLDPFS---EH-SDADLWEA----LERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~-tv~~nl~~~~---~~-~~~~~~~~----l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
+|+.++|+||++.+|.. |+.+|+.+.. .. .+++..+. ++..++.+ ++.........+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~q 155 (252)
T PRK14272 83 MRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWD-------EVKDRLKTPATGLSGGQQQ 155 (252)
T ss_pred hhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcch-------hhhhhhcCCcccCCHHHHH
Confidence 78889999999998875 9999996421 11 12222221 22222211 1222334556789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 156 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 156 RLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999987 9999999999999999999997
Q ss_pred hcCC
Q 001580 889 SNEG 892 (1050)
Q Consensus 889 ~~~~ 892 (1050)
..+.
T Consensus 236 ~~~~ 239 (252)
T PRK14272 236 TNPR 239 (252)
T ss_pred hCcC
Confidence 6543
No 303
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=366.35 Aligned_cols=204 Identities=33% Similarity=0.474 Sum_probs=177.4
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCcEE
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVA 109 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~i~ 109 (1050)
+.++++|++++|+ +.++++|+||+|++||+++|+|||||||||||++|+|+..|++|.+.. .++.||
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 4699999999997 457999999999999999999999999999999999999999886543 234699
Q ss_pred EEecCCCCC-cccHHHHhccCCCC----C-H---HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHH
Q 001580 110 YVPQVSWIF-NATVRDNILFGSAF----E-P---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 180 (1050)
Q Consensus 110 ~v~Q~~~l~-~~TV~eni~~g~~~----~-~---~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAr 180 (1050)
+|+|+..|| ..||+|||.||... . . +++.+.++..++....+..| .+|||||||||||||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVALAR 149 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVALAR 149 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHHHH
Confidence 999999998 78999999999651 1 1 25566677777777665555 589999999999999
Q ss_pred HHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccc-cCCcEEEEeccCcchhh-hcCEEEEEcCCeEeeccChhhhhcCh
Q 001580 181 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNG 257 (1050)
Q Consensus 181 aL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~-~~g~t~ilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 257 (1050)
||+.+|+|||||||+|+||.+.+..+...+++.. ..|.|.|+||||.+++- .+|||++|++|+|...|+++++...+
T Consensus 150 AL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 150 ALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 9999999999999999999999999988888764 35999999999998865 56999999999999999999987664
No 304
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=357.93 Aligned_cols=220 Identities=25% Similarity=0.348 Sum_probs=182.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCC--------ccEEEECCeecCCCChH
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE--------RGRILIDGFDIAKFGLM 737 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~--------~G~i~~~g~~i~~~~~~ 737 (1050)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|+ +|+|.++|.++...+..
T Consensus 2 l~~~nl~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRHR--AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECCE--eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 7899999999643 6999999999999999999999999999999999999998 99999999999887777
Q ss_pred HHhhheEEEcCCcc-cccccHHHhcccCCC-C-CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 738 DLRKILGIIPQSPV-LFSGTVRFNLDPFSE-H-SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~-lf~~tv~~nl~~~~~-~-~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
.+++.++|+||++. +|..|+++|+.+... . .............+.+.++. .|+.+..+....+||||||||++||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~l~~~~~~~~~~LSgG~~qrv~la 157 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALAL--AGATALVGRDVTTLSGGELARVQFA 157 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHH--cCcHhhhcCCcccCCHHHHHHHHHH
Confidence 78888999999986 567799999965311 0 00000000000112233333 3566666777789999999999999
Q ss_pred HHHc---------cCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 815 RALL---------RRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 815 rall---------~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
|||+ .+|++|||||||++||+.++..+.+.|+++.+ ++|||+|||+++.+.. ||++++|++|++++.|
T Consensus 158 ral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~g 237 (272)
T PRK13547 158 RVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAHG 237 (272)
T ss_pred HHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEec
Confidence 9999 59999999999999999999999999998653 7899999999999976 9999999999999999
Q ss_pred ChhHHhh
Q 001580 883 TPEELLS 889 (1050)
Q Consensus 883 ~~~el~~ 889 (1050)
+++++..
T Consensus 238 ~~~~~~~ 244 (272)
T PRK13547 238 APADVLT 244 (272)
T ss_pred CHHHHcC
Confidence 9988854
No 305
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=358.75 Aligned_cols=219 Identities=21% Similarity=0.349 Sum_probs=177.6
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCC---ccEEEECCeecCCC-----Ch
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE---RGRILIDGFDIAKF-----GL 736 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~---~G~i~~~g~~i~~~-----~~ 736 (1050)
.++++||+++|++. ++|+|+||+|.+||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 4 ~l~~~nl~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQH--QALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCCe--EEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 38999999999643 6999999999999999999999999999999999999986 49999999988653 23
Q ss_pred HHHhhheEEEcCCcccccc-cHHHhcccCCCC-CHH--H---HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 737 MDLRKILGIIPQSPVLFSG-TVRFNLDPFSEH-SDA--D---LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 737 ~~~r~~i~~v~Q~~~lf~~-tv~~nl~~~~~~-~~~--~---~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
..+++.++|+||++.+|.. |+.+|+.+.... ... . .........+.+.++.+ |+.........+|||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~q 159 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRV--GMVHFAHQRVSTLSGGQQQ 159 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHc--CCHHHHhCCccccCHHHHH
Confidence 4567889999999988874 999999643110 000 0 00000011223334332 4444455566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 886 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 886 (1050)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 160 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~~ 239 (262)
T PRK09984 160 RVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQQ 239 (262)
T ss_pred HHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999875 37899999999998766 99999999999999999998
Q ss_pred H
Q 001580 887 L 887 (1050)
Q Consensus 887 l 887 (1050)
+
T Consensus 240 ~ 240 (262)
T PRK09984 240 F 240 (262)
T ss_pred h
Confidence 6
No 306
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=7.7e-40 Score=356.68 Aligned_cols=215 Identities=22% Similarity=0.289 Sum_probs=175.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccc--cCCccEEEECCeecCCCChHHH-hhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMDL-RKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~--~p~~G~i~~~g~~i~~~~~~~~-r~~ 742 (1050)
|+++|++++|++. ++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++...+.... +..
T Consensus 1 l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVEDK--EILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECCE--EEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 4689999999643 6999999999999999999999999999999999994 7999999999999988776554 445
Q ss_pred eEEEcCCcccccc-cHHHhcccCCC----------CCHHHHHHHHHHhcHHHHHHHccCCcch-hhhcCCC-CCChhHHH
Q 001580 743 LGIIPQSPVLFSG-TVRFNLDPFSE----------HSDADLWEALERAHLKDAIRRNSLGLDA-QVSEAGE-NFSVGQRQ 809 (1050)
Q Consensus 743 i~~v~Q~~~lf~~-tv~~nl~~~~~----------~~~~~~~~~l~~~~~~~~i~~~p~gl~t-~v~~~~~-~LSgGq~q 809 (1050)
++|+||++.+|.. |+++|+.+... ....+.. ..+.+.++.+ |+.. ....... .|||||||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~q 151 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL-----KLLKAKLALL--GMDEEFLNRSVNEGFSGGEKK 151 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH-----HHHHHHHHHc--CCchhhcccccccCcCHHHHH
Confidence 9999999998876 89998853210 0101110 1123334332 4432 2333444 59999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh--cCEEEEEeCCEEEEecChhH
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID--CDRILLLDSGRVLEYDTPEE 886 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~--~d~i~vl~~G~i~~~g~~~e 886 (1050)
|++|||||+.+|++|||||||++||+.+++.+.+.|+++. +++|||+|||+++.+.. ||++++|++|++++.|++++
T Consensus 152 rl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (243)
T TIGR01978 152 RNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVEL 231 (243)
T ss_pred HHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHH
Confidence 9999999999999999999999999999999999999875 47899999999999976 79999999999999999987
Q ss_pred Hhh
Q 001580 887 LLS 889 (1050)
Q Consensus 887 l~~ 889 (1050)
+..
T Consensus 232 ~~~ 234 (243)
T TIGR01978 232 AKE 234 (243)
T ss_pred hcc
Confidence 653
No 307
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=371.58 Aligned_cols=211 Identities=23% Similarity=0.397 Sum_probs=178.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCC----hHHHhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG----LMDLRK 741 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~----~~~~r~ 741 (1050)
|++ |++++|++. .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ....++
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 33 899999999999999999999999999999999999999999999986422 334678
Q ss_pred heEEEcCCcccccc-cHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 742 ILGIIPQSPVLFSG-TVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 742 ~i~~v~Q~~~lf~~-tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
+++|+||++.+|.. |+++|+.+... ...+++.+.++..+ ++........+||||||||++|||||+.
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLG-----------IEPLLDRYPGSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcC-----------CchhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 89999999999965 99999975422 22334444444444 4444455567899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 892 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 892 (1050)
+|++|||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++++.. ||+|++|++|++++.|+++++..++.
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 9999999999999999999999999998653 6899999999999877 99999999999999999999987653
No 308
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=5.9e-39 Score=398.36 Aligned_cols=102 Identities=27% Similarity=0.450 Sum_probs=92.5
Q ss_pred Ccch-hhhcCCCCCChhHHHHHHHHHHHccCC---CEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhh
Q 001580 791 GLDA-QVSEAGENFSVGQRQLLSLSRALLRRS---KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTII 865 (1050)
Q Consensus 791 gl~t-~v~~~~~~LSgGq~qrl~lArall~~p---~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~ 865 (1050)
|+.. ..+....+||||||||+.|||+|+++| +++||||||+|||+.+...+.+.|+++. .|.|||+|||+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5543 357778899999999999999999999 9999999999999999999999999875 5789999999999998
Q ss_pred hcCEEEEE------eCCEEEEecChhHHhhcCC
Q 001580 866 DCDRILLL------DSGRVLEYDTPEELLSNEG 892 (1050)
Q Consensus 866 ~~d~i~vl------~~G~i~~~g~~~el~~~~~ 892 (1050)
.||+|++| ++|+|++.|+++++.....
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~ 930 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEA 930 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcc
Confidence 89999999 7999999999999987654
No 309
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=355.93 Aligned_cols=218 Identities=27% Similarity=0.422 Sum_probs=182.5
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCC-----ccEEEECCeecCC--CChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE-----RGRILIDGFDIAK--FGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~-----~G~i~~~g~~i~~--~~~~ 737 (1050)
.|+++|++++|+.. .+|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++.. .+..
T Consensus 7 ~l~~~nl~~~~~~~--~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~ 84 (261)
T PRK14258 7 AIKVNNLSFYYDTQ--KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLN 84 (261)
T ss_pred eEEEeeEEEEeCCe--eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchH
Confidence 59999999999643 6999999999999999999999999999999999999985 8999999998753 2345
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCC---C-CCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFS---E-HSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~-~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+|+.++|+||++.+|..|+.+|+.+.. . ... +.+.++++..++.+++ ....+..+.+|||||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~q 157 (261)
T PRK14258 85 RLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEI-------KHKIHKSALDLSGGQQQ 157 (261)
T ss_pred HhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHHHH
Confidence 6788899999999998899999996421 1 111 2233344444433222 22345666789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeC-----CEEEEe
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDS-----GRVLEY 881 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~-----G~i~~~ 881 (1050)
|++|||||+++|+||||||||++||+.+...+.+.|+++. .++|+|+|||+++++.. ||+|++|++ |++++.
T Consensus 158 rv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 237 (261)
T PRK14258 158 RLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEF 237 (261)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEe
Confidence 9999999999999999999999999999999999999853 47999999999999877 999999999 999999
Q ss_pred cChhHHhhcC
Q 001580 882 DTPEELLSNE 891 (1050)
Q Consensus 882 g~~~el~~~~ 891 (1050)
|+++++...+
T Consensus 238 ~~~~~~~~~~ 247 (261)
T PRK14258 238 GLTKKIFNSP 247 (261)
T ss_pred CCHHHHHhCC
Confidence 9999997654
No 310
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.7e-39 Score=346.49 Aligned_cols=201 Identities=23% Similarity=0.376 Sum_probs=170.4
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++||+++|+. .++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ .+++.++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999952 568999999999999999999999999999999999999999999999987543 36778999
Q ss_pred EcCCcccccc-cHHHhcccC-CC-C-----CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPF-SE-H-----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~-~~-~-----~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+||++.+|.. |+.+|+.+. .. . .+.++.++++..++.+.. .....+||||||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYL-----------DRLPEQLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHh-----------hCCcccCCHHHHHHHHHHHHH
Confidence 9999998875 999998642 11 1 122344455555554443 444468999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecC
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDT 883 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~ 883 (1050)
+.+|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++++.. ||++++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998653 7899999999999876 99999999999998875
No 311
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-39 Score=350.65 Aligned_cols=209 Identities=28% Similarity=0.461 Sum_probs=177.8
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++|++++|++ ++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|+++|.++...+. .++.++|
T Consensus 1 l~~~~l~~~~~~---~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE---FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC---ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 468999999963 38999999999999999999999999999999999999999999999999876554 3678999
Q ss_pred EcCCccccc-ccHHHhcccCCC---CC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 746 IPQSPVLFS-GTVRFNLDPFSE---HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~~---~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+||++.+|. .|+.+|+.+... .. ++++.++++.. |+...+.....+||||||||++||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrl~laral 144 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEML-----------GIDHLLNRKPETLSGGEQQRVAIARAL 144 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CChhHHhcCcccCCHHHHHHHHHHHHH
Confidence 999999885 599999964211 11 11233334443 344444555578999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
+++|++|+|||||++||+.+.+.+++.|+++.. ++|+|++||+++++.. ||++++|++|++++.|+++++.+.
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 220 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKK 220 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 999999999999999999999999999998653 7999999999999876 999999999999999999988764
No 312
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.8e-40 Score=321.90 Aligned_cols=194 Identities=25% Similarity=0.462 Sum_probs=173.6
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------Ee
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IR 105 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~~ 105 (1050)
+|+|+||++.|+.. +++|+||||+|++||++.|+||||||||||+|+|.++..|+.|.+.. .+
T Consensus 1 mI~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LR 78 (223)
T COG2884 1 MIRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLR 78 (223)
T ss_pred CeeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhh
Confidence 48999999999853 67999999999999999999999999999999999999999886543 35
Q ss_pred CcEEEEecCCCCC-cccHHHHhccCCCC---C----HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHH
Q 001580 106 GTVAYVPQVSWIF-NATVRDNILFGSAF---E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 177 (1050)
Q Consensus 106 ~~i~~v~Q~~~l~-~~TV~eni~~g~~~---~----~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~ 177 (1050)
++||+|+|+..|. ..||+||++|.... . .+++..++++.+|.+....+|. +|||||||||+
T Consensus 79 R~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRva 147 (223)
T COG2884 79 RQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVA 147 (223)
T ss_pred heeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHH
Confidence 5799999999874 88999999986431 1 2456678899999999988884 89999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhc-CEEEEEcCCeEeec
Q 001580 178 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQV-DRIILVHEGMVKEE 247 (1050)
Q Consensus 178 LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~-d~i~~l~~G~i~~~ 247 (1050)
||||++.+|++||-||||.+|||.....|++.+.+..+.|.|||+.|||.+.++.. -|++.+++|+++.+
T Consensus 148 IARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d 218 (223)
T COG2884 148 IARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRD 218 (223)
T ss_pred HHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEec
Confidence 99999999999999999999999999999998878888899999999999999987 89999999998854
No 313
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=355.07 Aligned_cols=206 Identities=23% Similarity=0.343 Sum_probs=171.2
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... +..++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 3699999999999999999999999999999999999999999999999988642 246899
Q ss_pred EcCCccccc-ccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.+|. .|+++|+.+.. .....+.. ..+.++++.+ |++......+.+||||||||++|||||+.+|
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrl~laral~~~p 147 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRL-----EIAHQMLKKV--GLEGAEKRYIWQLSGGQRQRVGIARALAANP 147 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999887 49999996431 11111111 1123334432 4444445566789999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEe--CCEEEEecChh
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLD--SGRVLEYDTPE 885 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~--~G~i~~~g~~~ 885 (1050)
++|||||||++||+.+...+.+.|+++. .++|+|+|||+++++.. ||+|++|+ +|++++.++.+
T Consensus 148 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 148 QLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 9999999999999999999999999863 37999999999999876 99999998 59999987754
No 314
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-39 Score=360.98 Aligned_cols=218 Identities=27% Similarity=0.467 Sum_probs=182.6
Q ss_pred ccEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-----CCccEEEECCeecCCC--Ch
Q 001580 664 GSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-----LERGRILIDGFDIAKF--GL 736 (1050)
Q Consensus 664 ~~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-----p~~G~i~~~g~~i~~~--~~ 736 (1050)
..|+++|++++|++. ++|+++||+|.+||++||+|+||||||||+++|+|+++ |++|+|.++|.++... +.
T Consensus 44 ~~l~i~nl~~~~~~~--~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~ 121 (305)
T PRK14264 44 AKLSVEDLDVYYGDD--HALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNL 121 (305)
T ss_pred ceEEEEEEEEEeCCe--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccH
Confidence 359999999999753 69999999999999999999999999999999999986 6899999999998643 34
Q ss_pred HHHhhheEEEcCCcccccccHHHhcccCCCC--------------------CHHHHHHHHHHhcHHHHHHHccCCcchhh
Q 001580 737 MDLRKILGIIPQSPVLFSGTVRFNLDPFSEH--------------------SDADLWEALERAHLKDAIRRNSLGLDAQV 796 (1050)
Q Consensus 737 ~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~--------------------~~~~~~~~l~~~~~~~~i~~~p~gl~t~v 796 (1050)
..+|+.++|+||++.+|..|+++|+.+.... .++.+.++++.+++ +.++.+..
T Consensus 122 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~ 194 (305)
T PRK14264 122 VELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAAL-------WDEVNDRL 194 (305)
T ss_pred HHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCC-------chhhhHHh
Confidence 5678899999999999988999999742110 01122233333322 12334556
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEE-EEEe
Q 001580 797 SEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRI-LLLD 874 (1050)
Q Consensus 797 ~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i-~vl~ 874 (1050)
+..+.+||||||||++|||||+++|+||||||||+|||+.+...+.+.|+++.++.|+|+|||+++.+.. ||++ ++|+
T Consensus 195 ~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~ 274 (305)
T PRK14264 195 DDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLT 274 (305)
T ss_pred cCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEec
Confidence 6777899999999999999999999999999999999999999999999998777899999999999876 9997 5679
Q ss_pred CCEEEEecChhHHhhc
Q 001580 875 SGRVLEYDTPEELLSN 890 (1050)
Q Consensus 875 ~G~i~~~g~~~el~~~ 890 (1050)
+|++++.|+++++...
T Consensus 275 ~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 275 GGELVEYDDTDKIFEN 290 (305)
T ss_pred CCEEEEeCCHHHHHhC
Confidence 9999999999998754
No 315
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-39 Score=352.81 Aligned_cols=219 Identities=26% Similarity=0.450 Sum_probs=181.2
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECC------eecCCCChHH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDG------FDIAKFGLMD 738 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g------~~i~~~~~~~ 738 (1050)
.+.++|++++|++. ++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++| .++...+...
T Consensus 10 ~i~~~~~~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 10 VFNISRLYLYINDK--AILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred heeeeeEEEecCCc--eeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 49999999999653 699999999999999999999999999999999999999997666655 6666666667
Q ss_pred HhhheEEEcCCcccccc-cHHHhcccCC---CC-CHHH----HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 739 LRKILGIIPQSPVLFSG-TVRFNLDPFS---EH-SDAD----LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~-tv~~nl~~~~---~~-~~~~----~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
+|+.++|+||++.+|.+ |+.+|+.+.. .. ...+ +.++++..++...+ ....+..+..|||||||
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~q 160 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEV-------YDRLNSPASQLSGGQQQ 160 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccc-------hhhhcCCcccCCHHHHH
Confidence 88899999999999875 9999997431 11 1222 22233333322111 12345566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++||||++.+|++|||||||++||+.++..+.+.|.++.+++|+|+|||+++++.. ||++++|++|++++.|+++++.
T Consensus 161 rl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 161 RLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999965 9999999999999999999998
Q ss_pred hcCC
Q 001580 889 SNEG 892 (1050)
Q Consensus 889 ~~~~ 892 (1050)
..+.
T Consensus 241 ~~~~ 244 (257)
T PRK14246 241 TSPK 244 (257)
T ss_pred hCCC
Confidence 6543
No 316
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-39 Score=353.09 Aligned_cols=218 Identities=23% Similarity=0.372 Sum_probs=180.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc--C---CccEEEECCeecCCC--ChH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE--L---ERGRILIDGFDIAKF--GLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~--p---~~G~i~~~g~~i~~~--~~~ 737 (1050)
.++++||+++|+. +++|+|+||+|.+||++||+||||||||||+++|+|+++ | ++|+|.++|.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 3899999999974 369999999999999999999999999999999999975 5 589999999988642 334
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCC---CC-CH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFS---EH-SD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~---~~-~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
.+++.++|+||++.+|..|+++|+.+.. .. .+ +++.++++.+++.. ++.........+|||||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWD-------EVKDHLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCcc-------chhhHHhcCcccCCHHHHH
Confidence 5678899999999999889999986421 11 11 12222333332221 2233455667789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|+|+|||+++++.. ||+|++|++|++++.|++.++.
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987667899999999999876 9999999999999999999987
Q ss_pred hcC
Q 001580 889 SNE 891 (1050)
Q Consensus 889 ~~~ 891 (1050)
..+
T Consensus 236 ~~~ 238 (252)
T PRK14255 236 LNP 238 (252)
T ss_pred cCC
Confidence 654
No 317
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-39 Score=337.17 Aligned_cols=194 Identities=28% Similarity=0.440 Sum_probs=159.8
Q ss_pred EEEEeEEEEeCCCCC-CCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE----------------
Q 001580 42 ISIRNGYFSWDSKAE-RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------------- 104 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~-~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~---------------- 104 (1050)
++++|+++.|..... .++|+++||+|++||+++|+|||||||||||++|.|+..|++|.+...
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 679999999975322 479999999999999999999999999999999999999988765431
Q ss_pred eCcEEEEecCCCCC-cccHHHHhccC----CCCC---HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHH
Q 001580 105 RGTVAYVPQVSWIF-NATVRDNILFG----SAFE---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 176 (1050)
Q Consensus 105 ~~~i~~v~Q~~~l~-~~TV~eni~~g----~~~~---~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv 176 (1050)
+..||||+|+..|. ..||.|||.+. .... ..+....++..++.+... .....+|||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 23599999998875 88999999853 1111 223333444555554443 122368999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhhcCEEEEEcCCeEe
Q 001580 177 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVK 245 (1050)
Q Consensus 177 ~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~ 245 (1050)
||||||+.+|++++.||||.+||.++.+.+++.+....+ .|+|+|+||||...+..|||++.+.+|++.
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999998887654 489999999999999999999999999843
No 318
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-39 Score=332.50 Aligned_cols=171 Identities=50% Similarity=0.798 Sum_probs=159.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++...++++|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 46899999996532369999999999999999999999999999999999999999999999999988777778889999
Q ss_pred EcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 001580 746 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 825 (1050)
Q Consensus 746 v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ill 825 (1050)
+||++.+|..|+.+|+ ||||||||++||||++.+|++||
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999888998886 99999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCCE
Q 001580 826 LDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGR 877 (1050)
Q Consensus 826 LDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~ 877 (1050)
|||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998877799999999999997799999999984
No 319
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-39 Score=322.99 Aligned_cols=212 Identities=26% Similarity=0.442 Sum_probs=184.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+.+|+|++..++ .+|+++||+++|||++||+||||||||||++.|+|.+.|++|++.++|.++..+++.++-++-++
T Consensus 2 i~a~nls~~~~Gr--~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLAGR--RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEeecc--eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 7889999988654 69999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCccc-ccccHHHhcccCC----C--C-CHHH--HHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 746 IPQSPVL-FSGTVRFNLDPFS----E--H-SDAD--LWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 746 v~Q~~~l-f~~tv~~nl~~~~----~--~-~~~~--~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
+||+..+ |.-||+|-+.++. . . .+++ ..+++.++++..+-.+. -..|||||||||.|||
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~-----------y~~LSGGEqQRVqlAR 148 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRD-----------YRTLSGGEQQRVQLAR 148 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccc-----------hhhcCchHHHHHHHHH
Confidence 9999875 7789999775432 1 1 1222 56677777776655442 3579999999999999
Q ss_pred HHcc------CCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 001580 816 ALLR------RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 816 all~------~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 887 (1050)
.|.+ ++++|+||||||+||+.....+.+..+++. .|+.|+.|-||++.... ||||++|.+||+++.|+|++.
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~v 228 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDV 228 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHh
Confidence 9986 346999999999999999999999999965 57899999999999866 999999999999999999999
Q ss_pred hhc
Q 001580 888 LSN 890 (1050)
Q Consensus 888 ~~~ 890 (1050)
+..
T Consensus 229 lt~ 231 (259)
T COG4559 229 LTD 231 (259)
T ss_pred cCH
Confidence 864
No 320
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4.1e-39 Score=346.15 Aligned_cols=204 Identities=25% Similarity=0.403 Sum_probs=173.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|+. .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.... ++.++|
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 468999999964 36999999999999999999999999999999999999999999999999875321 357999
Q ss_pred EcCCccccc-ccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFS-GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.+|. .|+++|+.+.. ...+.++.++++..++.+ .......+||||||||++||||++.+|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTN-----------TGKKKAKQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcH-----------HHhhhHhhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 59999986421 223344555555544443 334445689999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhH
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEE 886 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~e 886 (1050)
++|||||||++||+.+.+.+++.|+++. .++|+|++||+++++.. ||+|++|++|++++.|++.+
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999999865 47899999999999866 99999999999999998764
No 321
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.9e-40 Score=332.58 Aligned_cols=202 Identities=26% Similarity=0.440 Sum_probs=171.0
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------E
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------I 104 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~ 104 (1050)
..|+++|+++.||. ++.+|+||||+|++||+++|+|+|||||||||++|.|+.+|++|.+.. +
T Consensus 2 ~~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~ 79 (258)
T COG3638 2 MMIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKL 79 (258)
T ss_pred ceEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHH
Confidence 46999999999983 568999999999999999999999999999999999999999886543 2
Q ss_pred eCcEEEEecCCCCC-cccHHHHhccCCC------------CCHHH---HHHHHHHhCcHHHHhcCCCCCcccccCCCCCC
Q 001580 105 RGTVAYVPQVSWIF-NATVRDNILFGSA------------FEPAR---YEKAIDVTSLQHDLDLLPGGDVTEIGERGVNI 168 (1050)
Q Consensus 105 ~~~i~~v~Q~~~l~-~~TV~eni~~g~~------------~~~~~---~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~L 168 (1050)
+..|||++|++.|. ..||.+|++.|.- +.++. ...+++..++.+.. -.+..+|
T Consensus 80 r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A-----------~qra~~L 148 (258)
T COG3638 80 RRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKA-----------YQRASTL 148 (258)
T ss_pred HHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHH-----------HHHhccC
Confidence 34599999999986 7899999998742 12222 22344555544432 2244689
Q ss_pred CHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccc-cCCcEEEEeccCcchhhh-cCEEEEEcCCeEee
Q 001580 169 SGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKE 246 (1050)
Q Consensus 169 SGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~-~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~ 246 (1050)
||||+|||+|||||+++|+|+|-|||+++|||.+.+.+++.+.+.. ..|.|+|+.-|+++.+.+ ||||+-|++|+|++
T Consensus 149 SGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivf 228 (258)
T COG3638 149 SGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVF 228 (258)
T ss_pred CcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEE
Confidence 9999999999999999999999999999999999999999988764 469999999999999865 89999999999999
Q ss_pred ccChhhhh
Q 001580 247 EGTFEDLS 254 (1050)
Q Consensus 247 ~g~~~~l~ 254 (1050)
+|+++++.
T Consensus 229 Dg~~~el~ 236 (258)
T COG3638 229 DGPASELT 236 (258)
T ss_pred eCChhhhh
Confidence 99998854
No 322
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=8.7e-39 Score=346.96 Aligned_cols=221 Identities=30% Similarity=0.480 Sum_probs=188.0
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE------------eCcEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGTVA 109 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~------------~~~i~ 109 (1050)
|+++|+++.|+.. .+++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+... +..++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4789999999632 3579999999999999999999999999999999999999998865321 23599
Q ss_pred EEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 001580 110 YVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 188 (1050)
Q Consensus 110 ~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~v 188 (1050)
|++|++++++.||.||+.++.. .........++..++.+.++.++.+..+..+..+.+|||||||||+|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 9999999888899999988643 223344445556677777777777766777788899999999999999999999999
Q ss_pred EEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcChHHHHHHH
Q 001580 189 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLM 264 (1050)
Q Consensus 189 llLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~ 264 (1050)
+||||||++||+.+++.+.+.+.+.. +|+|+|++||+++++..||++++|++|++++.|+++++....+.|..+.
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 234 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLY 234 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHH
Confidence 99999999999999999999887764 4899999999999998899999999999999999988877665565543
No 323
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=3.3e-39 Score=368.81 Aligned_cols=212 Identities=24% Similarity=0.388 Sum_probs=176.8
Q ss_pred EEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCC----hHHHhhheEE
Q 001580 670 DVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG----LMDLRKILGI 745 (1050)
Q Consensus 670 ~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~----~~~~r~~i~~ 745 (1050)
|++++|++. .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ....|+.++|
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 799999642 35 999999999999999999999999999999999999999999999986532 2346778999
Q ss_pred EcCCcccccc-cHHHhcccCCCC-CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSEH-SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 823 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~~-~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~i 823 (1050)
+||++.+|.. |+++|+.+.... ...+. ...+.++++. .|++........+||||||||++|||||+.+|++
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~-----~~~~~~~l~~--~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~l 152 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSER-----RISFERVIEL--LGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRL 152 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHH-----HHHHHHHHHH--cCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 9999999975 999999753211 11110 1112333443 2555556666788999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 001580 824 LVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 892 (1050)
Q Consensus 824 llLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 892 (1050)
|||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++++.. ||+|++|++|++++.|+++++...+.
T Consensus 153 llLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 224 (354)
T TIGR02142 153 LLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPD 224 (354)
T ss_pred EEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcC
Confidence 999999999999999999999998653 7899999999999876 99999999999999999999987654
No 324
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.4e-38 Score=350.93 Aligned_cols=226 Identities=24% Similarity=0.369 Sum_probs=184.2
Q ss_pred EEEEEEEEEeCC-------CCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH-
Q 001580 666 IKFEDVVLRYRP-------ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM- 737 (1050)
Q Consensus 666 i~~~~v~~~y~~-------~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~- 737 (1050)
|+++||+++|+. ..+++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 889999999963 124799999999999999999999999999999999999999999999999998876653
Q ss_pred --HHhhheEEEcCCcc--ccc-ccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcch-hhhcCCCCCChhHHHH
Q 001580 738 --DLRKILGIIPQSPV--LFS-GTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDA-QVSEAGENFSVGQRQL 810 (1050)
Q Consensus 738 --~~r~~i~~v~Q~~~--lf~-~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t-~v~~~~~~LSgGq~qr 810 (1050)
.+++.++|+||++. ++. .|+.+|+.+... ... .........+.+.++.+ |+++ ..+.....||||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge~qr 159 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLS--LDKAERLARASEMLRAV--DLDDSVLDKRPPQLSGGQLQR 159 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhcc--CCHHHHHHHHHHHHHHc--CCChhHhhCCCccCChHHHHH
Confidence 46788999999983 443 589998743100 000 00111112344555553 6653 5667778999999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 887 (1050)
++|||||+.+|+||||||||++||+.++..+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 160 l~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 239 (268)
T PRK10419 160 VCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDK 239 (268)
T ss_pred HHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhc
Confidence 9999999999999999999999999999999999998653 7899999999999986 999999999999999999998
Q ss_pred hhcCCChHH
Q 001580 888 LSNEGSSFS 896 (1050)
Q Consensus 888 ~~~~~~~~~ 896 (1050)
... ...|.
T Consensus 240 ~~~-~~~~~ 247 (268)
T PRK10419 240 LTF-SSPAG 247 (268)
T ss_pred cCC-CCHHH
Confidence 753 33444
No 325
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=8e-39 Score=350.64 Aligned_cols=218 Identities=23% Similarity=0.385 Sum_probs=179.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCee-----cCCCChHHH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFD-----IAKFGLMDL 739 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~-----i~~~~~~~~ 739 (1050)
.++++||+++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +...+....
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGGG--KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCCc--eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 38999999999643 68999999999999999999999999999999999999999999999987 666655432
Q ss_pred ----hhheEEEcCCcc--cc-cccHHHhccc----CCCCCHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCCCCChhH
Q 001580 740 ----RKILGIIPQSPV--LF-SGTVRFNLDP----FSEHSDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGENFSVGQ 807 (1050)
Q Consensus 740 ----r~~i~~v~Q~~~--lf-~~tv~~nl~~----~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~~LSgGq 807 (1050)
++.++|++|++. ++ ..|+.+|+.. .......+. ...+.++++.+ |+. +........|||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~LSgG~ 153 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEV--EIDPTRIDDLPRAFSGGM 153 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHc--CCChhhhhcCchhcCHHH
Confidence 457999999984 22 3477777642 111011111 12345666665 443 46677788999999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecCh
Q 001580 808 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 884 (1050)
Q Consensus 808 ~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 884 (1050)
|||++|||||+.+|++|||||||++||+.+++.+.+.|++.. .+.|+|+|||+++.+.. ||++++|++|++++.|++
T Consensus 154 ~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~ 233 (253)
T TIGR02323 154 QQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLT 233 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999998864 37899999999999986 999999999999999999
Q ss_pred hHHhhcC
Q 001580 885 EELLSNE 891 (1050)
Q Consensus 885 ~el~~~~ 891 (1050)
+++....
T Consensus 234 ~~~~~~~ 240 (253)
T TIGR02323 234 DQVLDDP 240 (253)
T ss_pred HHHhcCC
Confidence 9987643
No 326
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-39 Score=332.10 Aligned_cols=172 Identities=32% Similarity=0.515 Sum_probs=158.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCC--hHHHhhhe
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFG--LMDLRKIL 743 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~--~~~~r~~i 743 (1050)
++++|++++|+. +++++|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 468999999964 36999999999999999999999999999999999999999999999999998765 55678899
Q ss_pred EEEcCCcccccc-cHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
+|+||++.+|.. |+++|+.+. ||||||||++|||||+++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999988864 999998642 99999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCE
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGR 877 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~ 877 (1050)
+|||||||++||+.++..+.+.|+++.+ ++|+|++||+++++.. ||++++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999998654 6899999999999986 99999999985
No 327
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.1e-38 Score=349.50 Aligned_cols=214 Identities=25% Similarity=0.394 Sum_probs=175.1
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC----CccEEEECCeecCCCChHHHh
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL----ERGRILIDGFDIAKFGLMDLR 740 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p----~~G~i~~~g~~i~~~~~~~~r 740 (1050)
.++++|++++| + .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... ...+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 48999999999 3 3699999999999999999999999999999999999999 999999999988632 2234
Q ss_pred hheEEEcCCcc-ccc--ccHHHhccc----CC-CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 001580 741 KILGIIPQSPV-LFS--GTVRFNLDP----FS-EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 741 ~~i~~v~Q~~~-lf~--~tv~~nl~~----~~-~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~ 812 (1050)
+.++|+||++. .|. .|+.+|+.. .. ...++++.+.++..++.+ ..+.++....+||||||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--------~~~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLEN--------AARVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCC--------hhhhhhcCCcccCHHHHHHHH
Confidence 67999999985 343 377776532 11 112233444444433321 112456677889999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||+.+|+||||||||++||+.+++.+.+.|+++.+ ++|||++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999998643 7899999999999876 99999999999999999999976
Q ss_pred cC
Q 001580 890 NE 891 (1050)
Q Consensus 890 ~~ 891 (1050)
..
T Consensus 231 ~~ 232 (254)
T PRK10418 231 AP 232 (254)
T ss_pred CC
Confidence 54
No 328
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=4.7e-39 Score=344.88 Aligned_cols=206 Identities=25% Similarity=0.396 Sum_probs=171.3
Q ss_pred EEEEEEEEEeCCC--CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH---HHh
Q 001580 666 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM---DLR 740 (1050)
Q Consensus 666 i~~~~v~~~y~~~--~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~---~~r 740 (1050)
++++|+++.|+++ ...+|+|+||++++|+++||+|+||||||||+++|+|+++|++|+|.++|.++...++. ..+
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 7899999999642 14699999999999999999999999999999999999999999999999999776643 357
Q ss_pred hheEEEcCCccccc-ccHHHhcccCC----CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 741 KILGIIPQSPVLFS-GTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 741 ~~i~~v~Q~~~lf~-~tv~~nl~~~~----~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
+.++|+||++.+|. .|+.+|+.+.. .....+..+ .+.+.++.+ |+.......+.+||||||||++|||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrv~lar 154 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARE-----RARAMLEAV--GLGDHLDYYPHNLSGGQKQRVAIAR 154 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHH
Confidence 88999999999887 59999997432 111111111 123334432 4555555566789999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhhcCEEEEEeCCEE
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIIDCDRILLLDSGRV 878 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~~d~i~vl~~G~i 878 (1050)
||+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|++||+++....||+|++|++|++
T Consensus 155 al~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 155 ALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999999998753 7999999999997666999999999986
No 329
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-39 Score=329.78 Aligned_cols=170 Identities=31% Similarity=0.575 Sum_probs=156.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++. ++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ..+++.++|
T Consensus 1 l~~~~l~~~~~~~--~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGKK--TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 4689999999643 6999999999999999999999999999999999999999999999999987655 567788999
Q ss_pred EcCCcccccc-cHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 824 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~il 824 (1050)
+||++.+|.. |+++|+. ||||||||++|||||+.+|++|
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999988876 9998862 9999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEE
Q 001580 825 VLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 878 (1050)
Q Consensus 825 lLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 878 (1050)
||||||++||+.+.+.+.+.|++.. ++.|+|++||+++++.. ||++++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999999875 46899999999999886 999999999974
No 330
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7.1e-38 Score=345.49 Aligned_cols=221 Identities=36% Similarity=0.669 Sum_probs=188.9
Q ss_pred CCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEEeCcEEEEec
Q 001580 34 PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQ 113 (1050)
Q Consensus 34 ~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~~~~i~~v~Q 113 (1050)
+...+.+.|+++|+++.+ +++|+++||+|++|++++|+|+||||||||+++|+|+++|++|.+ .+.+.|+|++|
T Consensus 32 ~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I-~i~g~i~yv~q 105 (282)
T cd03291 32 KHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKI-KHSGRISFSSQ 105 (282)
T ss_pred ccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEE-EECCEEEEEeC
Confidence 334455679999999952 469999999999999999999999999999999999999998765 46778999999
Q ss_pred CCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeC
Q 001580 114 VSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDD 193 (1050)
Q Consensus 114 ~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDE 193 (1050)
++.+++.||+||+.++......++...++.+++.+.++.++.+..+.++..+.+||||||||++|||||+.+|++|||||
T Consensus 106 ~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDE 185 (282)
T cd03291 106 FSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDS 185 (282)
T ss_pred cccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99998889999999875444344455666778888888888887788888889999999999999999999999999999
Q ss_pred CCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcChHHH
Q 001580 194 PLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELF 260 (1050)
Q Consensus 194 Pts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~ 260 (1050)
||++||+.+++.+.+.+++...++.|+|++||+++++..||++++|++|++++.|+++++......|
T Consensus 186 Pt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~ 252 (282)
T cd03291 186 PFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLRPDF 252 (282)
T ss_pred CCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcchHH
Confidence 9999999999999886543333578999999999999889999999999999999998887543333
No 331
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-38 Score=340.81 Aligned_cols=201 Identities=24% Similarity=0.389 Sum_probs=167.8
Q ss_pred EEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCC----ChHHHhhheEE
Q 001580 670 DVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF----GLMDLRKILGI 745 (1050)
Q Consensus 670 ~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~----~~~~~r~~i~~ 745 (1050)
||+++|++. .+ |+||+|++ |++||+||||||||||+++|+|+++|++|+|.++|.++... +....++.++|
T Consensus 5 ~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~ 79 (214)
T cd03297 5 DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRKIGL 79 (214)
T ss_pred eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhcEEE
Confidence 899999753 34 99999999 99999999999999999999999999999999999988642 22346778999
Q ss_pred EcCCccccc-ccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 001580 746 IPQSPVLFS-GTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 823 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~i 823 (1050)
+||++.+|. .|+++|+.+... ..... ....+.++++.+ |++......+.+||||||||++||||++.+|++
T Consensus 80 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 152 (214)
T cd03297 80 VFQQYALFPHLNVRENLAFGLKRKRNRE-----DRISVDELLDLL--GLDHLLNRYPAQLSGGEKQRVALARALAAQPEL 152 (214)
T ss_pred EecCCccCCCCCHHHHHHHHHhhCCHHH-----HHHHHHHHHHHc--CCHhHhhcCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 499999874321 11111 112234455543 566666777789999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 824 LVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 824 llLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++++.. ||++++|++|++++.|
T Consensus 153 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 153 LLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999998643 7899999999999876 9999999999998765
No 332
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=1.6e-38 Score=346.34 Aligned_cols=200 Identities=29% Similarity=0.449 Sum_probs=172.0
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++||+++|++. ++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~~--~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQR--RVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECCc--eEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 38999999999643 699999999999999999999999999999999999999999999986 24699
Q ss_pred EEcCCccccc---ccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 745 IIPQSPVLFS---GTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 745 ~v~Q~~~lf~---~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
|+||++.++. .|+.+|+.......++++.++++..++.+++. .....||||||||++|||||+.+|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLID-----------APMQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHHh-----------CChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999997764 37888875433334556666677666655443 334679999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
++|||||||++||+.++..+++.|+++.+ ++|+|+|||+++++.. ||+|++|++ ++++.|+++++..
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~ 209 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSL 209 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhC
Confidence 99999999999999999999999988653 7899999999999876 999999965 7999999999864
No 333
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=9.2e-39 Score=344.03 Aligned_cols=212 Identities=25% Similarity=0.386 Sum_probs=170.8
Q ss_pred EEEEEEEEEeCCC--CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc---CCccEEEECCeecCCCChHHHh
Q 001580 666 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDLR 740 (1050)
Q Consensus 666 i~~~~v~~~y~~~--~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~---p~~G~i~~~g~~i~~~~~~~~r 740 (1050)
+.++||+++|++. .+++++|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 6789999999654 2579999999999999999999999999999999999999 99999999999875 34578
Q ss_pred hheEEEcCCcccccc-cHHHhcccCCCC-CHHHHHHHHHHhcHHH-HHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 741 KILGIIPQSPVLFSG-TVRFNLDPFSEH-SDADLWEALERAHLKD-AIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 741 ~~i~~v~Q~~~lf~~-tv~~nl~~~~~~-~~~~~~~~l~~~~~~~-~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+.++|+||++.+|.. |+++|+.+.... ......+......... .++. .++..........||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRD--LALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHh--hcchhhhcccccCcCHHHHHHHHHHHHH
Confidence 889999999999986 999999742110 0000000011111111 2332 2444445556678999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCc-hhhhh-cCEEEEEeCCEEEEec
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRL-NTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~-~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
+.+|++|||||||++||+.+...+.+.|++.. .+.|+|++||++ +++.. ||++++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999864 478999999998 46655 9999999999998865
No 334
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5e-39 Score=312.81 Aligned_cols=199 Identities=27% Similarity=0.461 Sum_probs=173.3
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE----------eCcEEEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI----------RGTVAYV 111 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~----------~~~i~~v 111 (1050)
|.++++.|+|...+ =..+++|+.||+++|+||+|||||||+++|+|+..|.+|.+... .+.|+++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 56789999997432 25789999999999999999999999999999999998876542 3459999
Q ss_pred ecCCCCC-cccHHHHhccCCC-------CCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 001580 112 PQVSWIF-NATVRDNILFGSA-------FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVY 183 (1050)
Q Consensus 112 ~Q~~~l~-~~TV~eni~~g~~-------~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~ 183 (1050)
+|++.|| ..||.+||-+|.. .+.++++.++...++....+.+|. +|||||||||+|||+|+
T Consensus 77 FQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARclv 145 (231)
T COG3840 77 FQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCLV 145 (231)
T ss_pred hhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHHh
Confidence 9999998 7899999999842 134567777888999999999985 89999999999999999
Q ss_pred cCCCEEEEeCCCCCcCHHHHHHHHHHHHccc-cCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 184 SNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 184 ~~~~vllLDEPts~LD~~~~~~l~~~l~~~~-~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
++-+|++||||||+|||.-+..+...+.+.. .++.|+++|||.++.+.. +|+++++++|+|.++|+.+++...
T Consensus 146 R~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 146 REQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred ccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 9999999999999999999999988766653 468999999999999876 699999999999999999887754
No 335
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.4e-39 Score=361.42 Aligned_cols=205 Identities=25% Similarity=0.376 Sum_probs=171.2
Q ss_pred cEEEEeEEEEeCCCC-CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------E
Q 001580 41 AISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------I 104 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~ 104 (1050)
+|+++|++++|+..+ .+++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+.. .
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 378999999996322 347999999999999999999999999999999999999999886532 1
Q ss_pred eCcEEEEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHH
Q 001580 105 RGTVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 176 (1050)
Q Consensus 105 ~~~i~~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv 176 (1050)
++.|||+||++.++ ..||+||+.++.. ... ++..+.++..++.+..+. ...+|||||||||
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~-----------~~~~LSgGqkQRV 149 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDS-----------YPSNLSGGQKQRV 149 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHH
Confidence 34699999999887 6899999987532 121 223344555555444333 3468999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhh
Q 001580 177 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 177 ~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
+|||||+.+|++|||||||++||+.+...+++.+.+..+ .|.|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 150 ~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 150 AIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999998877654 48999999999999865 8999999999999999999987
Q ss_pred cC
Q 001580 255 NN 256 (1050)
Q Consensus 255 ~~ 256 (1050)
..
T Consensus 230 ~~ 231 (343)
T TIGR02314 230 SH 231 (343)
T ss_pred cC
Confidence 54
No 336
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.6e-37 Score=398.92 Aligned_cols=211 Identities=24% Similarity=0.320 Sum_probs=148.9
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHH---------HHhccccCCcc--------EEEEC
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLN---------TLFRIVELERG--------RILID 727 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~---------~l~g~~~p~~G--------~i~~~ 727 (1050)
.+++++++. ..|+|+||+|++||++||.|+||||||||++ .|.|...+..+ -|.+|
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 378888752 3799999999999999999999999999999 55554332111 23444
Q ss_pred CeecCCCCh----H------HHh---------hheE-----EEcCC------------------c---------------
Q 001580 728 GFDIAKFGL----M------DLR---------KILG-----IIPQS------------------P--------------- 750 (1050)
Q Consensus 728 g~~i~~~~~----~------~~r---------~~i~-----~v~Q~------------------~--------------- 750 (1050)
-.++..-+. . .+| +..| +.++. +
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 333332111 1 233 1122 12221 0
Q ss_pred -----ccccc-cHHHhcccCCCC------CHHHHHHHHHHhcHHHHHHHccCCcchh-hhcCCCCCChhHHHHHHHHHHH
Q 001580 751 -----VLFSG-TVRFNLDPFSEH------SDADLWEALERAHLKDAIRRNSLGLDAQ-VSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 751 -----~lf~~-tv~~nl~~~~~~------~~~~~~~~l~~~~~~~~i~~~p~gl~t~-v~~~~~~LSgGq~qrl~lAral 817 (1050)
..+.+ ||.|+|.+.... ...++.+. + +.++. .|+... .++...+||||||||++|||||
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~-----l-~~L~~--vGL~~l~l~q~~~tLSGGE~QRV~LAraL 824 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEK-----I-HALCS--LGLDYLPLGRPLSSLSGGEIQRLKLAYEL 824 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHH-----H-HHHHH--cCCcchhhcCccccCCHHHHHHHHHHHHH
Confidence 12333 666666542110 01111111 1 23333 467665 6888889999999999999999
Q ss_pred c---cCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhhcCEEEEEe------CCEEEEecChhHH
Q 001580 818 L---RRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLD------SGRVLEYDTPEEL 887 (1050)
Q Consensus 818 l---~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~------~G~i~~~g~~~el 887 (1050)
+ .+|++|||||||+|||+.+.+.+.+.|+++. .|.|||+|||+++.+..||+|++|. +|++++.|+++++
T Consensus 825 ~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpeel 904 (1809)
T PRK00635 825 LAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEEL 904 (1809)
T ss_pred hhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHHH
Confidence 8 6999999999999999999999999998865 4789999999999996699999996 7999999999999
Q ss_pred hhc
Q 001580 888 LSN 890 (1050)
Q Consensus 888 ~~~ 890 (1050)
...
T Consensus 905 ~~~ 907 (1809)
T PRK00635 905 IHL 907 (1809)
T ss_pred Hhc
Confidence 753
No 337
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=355.50 Aligned_cols=217 Identities=23% Similarity=0.409 Sum_probs=175.1
Q ss_pred CCCCCCCCcEEEEeEEEEeCCCC--CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------
Q 001580 33 PPLTSGLPAISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------- 103 (1050)
Q Consensus 33 ~~~~~~~~~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------- 103 (1050)
|...++.+.|+++|++|.|+... .+++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+..
T Consensus 13 ~~~~~~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~ 92 (320)
T PRK13631 13 PNPLSDDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGD 92 (320)
T ss_pred CCCCCCCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccc
Confidence 33445557899999999997421 247999999999999999999999999999999999999999875532
Q ss_pred ---------------------EeCcEEEEecCC--CCCcccHHHHhccCCC---CCHHH----HHHHHHHhCcHHHHhcC
Q 001580 104 ---------------------IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEPAR----YEKAIDVTSLQHDLDLL 153 (1050)
Q Consensus 104 ---------------------~~~~i~~v~Q~~--~l~~~TV~eni~~g~~---~~~~~----~~~~~~~~~l~~~~~~~ 153 (1050)
.++.||||+|+| .++..||+|||.|+.. ...+. ....++..++..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----- 167 (320)
T PRK13631 93 KKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD----- 167 (320)
T ss_pred ccccccccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh-----
Confidence 123599999998 5788899999998732 12221 122222333221
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhh-h
Q 001580 154 PGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-Q 232 (1050)
Q Consensus 154 ~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~-~ 232 (1050)
...+..+.+|||||||||+|||||+.+|++|||||||++||+.+++++++.+.+...+|+|+|+||||++++. .
T Consensus 168 -----~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~ 242 (320)
T PRK13631 168 -----SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEV 242 (320)
T ss_pred -----hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHh
Confidence 1245566899999999999999999999999999999999999999999988766556899999999999875 5
Q ss_pred cCEEEEEcCCeEeeccChhhhhcChHH
Q 001580 233 VDRIILVHEGMVKEEGTFEDLSNNGEL 259 (1050)
Q Consensus 233 ~d~i~~l~~G~i~~~g~~~~l~~~~~~ 259 (1050)
||+|++|++|++++.|+++++......
T Consensus 243 adri~vl~~G~i~~~g~~~~~~~~~~~ 269 (320)
T PRK13631 243 ADEVIVMDKGKILKTGTPYEIFTDQHI 269 (320)
T ss_pred CCEEEEEECCEEEEeCCHHHHhcCHHH
Confidence 899999999999999999988766443
No 338
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-38 Score=341.13 Aligned_cols=226 Identities=26% Similarity=0.450 Sum_probs=184.4
Q ss_pred EEEEEEEEEeCCC--CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc-C----CccEEEECCeecCCCChHH
Q 001580 666 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE-L----ERGRILIDGFDIAKFGLMD 738 (1050)
Q Consensus 666 i~~~~v~~~y~~~--~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~-p----~~G~i~~~g~~i~~~~~~~ 738 (1050)
++++|++..|... ...+++||||+|.+||++||||.|||||||+.++|+|+++ | .+|+|.++|.|+.+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 6889999999532 2469999999999999999999999999999999999998 4 5799999999999999875
Q ss_pred Hh----hheEEEcCCcc-cccc--cHHHhcc----cCCCC-C----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCC
Q 001580 739 LR----KILGIIPQSPV-LFSG--TVRFNLD----PFSEH-S----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 802 (1050)
Q Consensus 739 ~r----~~i~~v~Q~~~-lf~~--tv~~nl~----~~~~~-~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~ 802 (1050)
+| +.|++|||+|. -++- ||.+.+. ..... . .++..+.++.+++.+ .+..+..-+.+
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~--------~~~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPD--------PERRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCC--------HHHHHhhCCcc
Confidence 43 35999999985 2332 6655442 11111 1 223455555555432 11234455678
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEE
Q 001580 803 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVL 879 (1050)
Q Consensus 803 LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~ 879 (1050)
||||||||+.||-||+.+|++||.||||++||...++.|.+.|+++. .+.|+|+||||+..+.. ||||+||..|+|+
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 99999999999999999999999999999999999999999999876 47999999999999877 9999999999999
Q ss_pred EecChhHHhhcCCChHHHHH
Q 001580 880 EYDTPEELLSNEGSSFSKMV 899 (1050)
Q Consensus 880 ~~g~~~el~~~~~~~~~~~~ 899 (1050)
|.|+.+++..++...|.+.+
T Consensus 234 E~g~~~~i~~~P~HPYT~~L 253 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGL 253 (316)
T ss_pred EeCCHHHHhcCCCChHHHHH
Confidence 99999999998877777544
No 339
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=350.13 Aligned_cols=209 Identities=28% Similarity=0.409 Sum_probs=170.7
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++||+++|+++ +++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ...++.++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 38999999999633 369999999999999999999999999999999999999999999999998742 11234699
Q ss_pred EEcCCccc---ccccHHHhcccCC--------CC---CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 745 IIPQSPVL---FSGTVRFNLDPFS--------EH---SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 745 ~v~Q~~~l---f~~tv~~nl~~~~--------~~---~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
|+||++.+ +..++++|+.+.. .. ..+.+.++++..++ .........+||||||||
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgG~~qr 150 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDM-----------VEFRHRQIGELSGGQKKR 150 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCC-----------hhHhcCCcccCCHHHHHH
Confidence 99999865 3447888875311 00 11223334444443 333444557899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++++.. ||+++++ +|++++.|+++++.
T Consensus 151 v~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~ 229 (272)
T PRK15056 151 VFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTF 229 (272)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhcc
Confidence 999999999999999999999999999999999999875 47899999999999866 9999777 89999999999875
Q ss_pred h
Q 001580 889 S 889 (1050)
Q Consensus 889 ~ 889 (1050)
.
T Consensus 230 ~ 230 (272)
T PRK15056 230 T 230 (272)
T ss_pred C
Confidence 3
No 340
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-38 Score=334.88 Aligned_cols=189 Identities=26% Similarity=0.373 Sum_probs=161.2
Q ss_pred EEEEEEEEEeCCC--CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcccc---CCccEEEECCeecCCCChHHHh
Q 001580 666 IKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVE---LERGRILIDGFDIAKFGLMDLR 740 (1050)
Q Consensus 666 i~~~~v~~~y~~~--~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~---p~~G~i~~~g~~i~~~~~~~~r 740 (1050)
+.++||+|.|+.+ .+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.++|.++...+ ...+
T Consensus 4 ~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~~ 82 (202)
T cd03233 4 LSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKYP 82 (202)
T ss_pred EEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhhc
Confidence 7899999999642 4579999999999999999999999999999999999999 89999999999987654 3567
Q ss_pred hheEEEcCCcccccc-cHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 741 KILGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 741 ~~i~~v~Q~~~lf~~-tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
+.++|+||++.+|.. |+++|+.+.... . ..+....||||||||++|||||++
T Consensus 83 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~------------~---------------~~~~~~~LS~Ge~qrl~laral~~ 135 (202)
T cd03233 83 GEIIYVSEEDVHFPTLTVRETLDFALRC------------K---------------GNEFVRGISGGERKRVSIAEALVS 135 (202)
T ss_pred ceEEEEecccccCCCCcHHHHHhhhhhh------------c---------------cccchhhCCHHHHHHHHHHHHHhh
Confidence 789999999988865 999998653100 0 223346799999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEee-cCchhhhh-cCEEEEEeCCEEEEec
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIA-HRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vt-H~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
+|++|||||||++||+.+++.+++.|+++.+ +.|+|+++ |+++.+.. ||++++|++|++++.|
T Consensus 136 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 136 RASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999999999999999998754 46766655 55677755 9999999999998754
No 341
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.6e-39 Score=307.61 Aligned_cols=194 Identities=26% Similarity=0.386 Sum_probs=168.3
Q ss_pred eCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCccccc
Q 001580 675 YRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFS 754 (1050)
Q Consensus 675 y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~ 754 (1050)
|.....++|+++||++.+||.++|.||||||||||++.++-+..|++|++++.|.+++..++..+|++|+||-|.|.||.
T Consensus 11 y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg 90 (223)
T COG4619 11 YLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFG 90 (223)
T ss_pred hhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccc
Confidence 43334579999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHhcccCC-----CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEecc
Q 001580 755 GTVRFNLDPFS-----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEA 829 (1050)
Q Consensus 755 ~tv~~nl~~~~-----~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEp 829 (1050)
+||.+|+.|-. ...... +.+++.++. -.++.+..+..+||||||||++|+|-|.--|+|||||||
T Consensus 91 ~tVeDNlifP~~~r~rr~dr~a---------a~~llar~~-l~~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~ 160 (223)
T COG4619 91 DTVEDNLIFPWQIRNRRPDRAA---------ALDLLARFA-LPDSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEI 160 (223)
T ss_pred cchhhccccchHHhccCCChHH---------HHHHHHHcC-CchhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCc
Confidence 99999997521 112222 233444432 124666777889999999999999999999999999999
Q ss_pred CcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchh-hhhcCEEEEEeCCEE
Q 001580 830 TAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNT-IIDCDRILLLDSGRV 878 (1050)
Q Consensus 830 ts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~-~~~~d~i~vl~~G~i 878 (1050)
||+||+.+.+.|.+.|..+. ++..+++|||+.+. +..+|+++-+..|++
T Consensus 161 TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~ 212 (223)
T COG4619 161 TSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHA 212 (223)
T ss_pred hhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcc
Confidence 99999999999999999876 36899999999998 566999999999876
No 342
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=3.1e-38 Score=333.10 Aligned_cols=185 Identities=25% Similarity=0.378 Sum_probs=162.4
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcc--ccCCccEEEECCeecCCCChHHH-hhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRI--VELERGRILIDGFDIAKFGLMDL-RKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~--~~p~~G~i~~~g~~i~~~~~~~~-r~~ 742 (1050)
++++|++++|++ .++++|+||++.+||++||+|+||||||||+++|+|+ ++|++|+|.++|.++...+.... |..
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 468999999974 3699999999999999999999999999999999999 58999999999999988776554 456
Q ss_pred eEEEcCCcccccc-cHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 743 LGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 743 i~~v~Q~~~lf~~-tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
++|+||++.+|.+ ++++++ .. ...+||||||||++||||++.+|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l------------------------~~-----------~~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFL------------------------RY-----------VNEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHH------------------------hh-----------ccccCCHHHHHHHHHHHHHhcCC
Confidence 9999999988875 555544 01 11469999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhh--hcCEEEEEeCCEEEEecChhHHh
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTII--DCDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~vtH~~~~~~--~~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
++|||||||++||+.+...+++.|++..+ ++|+|++||+++.+. .||++++|++|++++.| +.|+.
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999999998754 789999999999987 59999999999999999 44453
No 343
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=4.9e-38 Score=341.31 Aligned_cols=214 Identities=32% Similarity=0.525 Sum_probs=183.0
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE------------eCcEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGTVA 109 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~------------~~~i~ 109 (1050)
++++|+++.|+...++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+... +..++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 478999999975334579999999999999999999999999999999999999998865321 23599
Q ss_pred EEecCCCCCcccHHHHhccCCCC-CHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 001580 110 YVPQVSWIFNATVRDNILFGSAF-EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 188 (1050)
Q Consensus 110 ~v~Q~~~l~~~TV~eni~~g~~~-~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~v 188 (1050)
|++|++.++..||+||+.++... ...+.....+.+++.+.++.++.+..+..+....+|||||||||+|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999998878999999986432 23344445566677777777777777777788899999999999999999999999
Q ss_pred EEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcC
Q 001580 189 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 189 llLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
+||||||++||+.+++++++.+.... +|+|+|++||+++++..||++++|++|++++.|+.+++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 99999999999999999999887665 78999999999999988899999999999999988777544
No 344
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.6e-38 Score=329.62 Aligned_cols=177 Identities=33% Similarity=0.532 Sum_probs=157.1
Q ss_pred EEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEE
Q 001580 667 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 746 (1050)
Q Consensus 667 ~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v 746 (1050)
+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++..+++.++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 47899999964 3699999999999999999999999999999999999999999999999999888887888889999
Q ss_pred cCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 001580 747 PQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVL 826 (1050)
Q Consensus 747 ~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illL 826 (1050)
|| +++..++.+++. ..+.+||||||||++||||++.+|++|||
T Consensus 79 ~q--------------------------~l~~~gl~~~~~-----------~~~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLAD-----------RPFNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 98 344444444332 34568999999999999999999999999
Q ss_pred eccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 827 DEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 827 DEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
||||++||+.+.+.+.+.|+++.+ ++|+|++||+++++.. ||++++|++|++++.|
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999998754 7899999999999865 9999999999998653
No 345
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.2e-38 Score=384.28 Aligned_cols=239 Identities=17% Similarity=0.252 Sum_probs=197.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcc-cC---CCC------CCCCCCCcEEEEeEEEEeCCCC--CCCceeeceEEeeC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKI-LL---PNP------PLTSGLPAISIRNGYFSWDSKA--ERPTLLNINLDIPV 69 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~-~~---~~~------~~~~~~~~i~~~~~~f~~~~~~--~~~~L~~isl~i~~ 69 (1050)
...++.+.++++|++||.++++.++.. .. +.. +.......|+++|++|+|+.+. .+++|+|+||++++
T Consensus 288 ~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~ 367 (555)
T TIGR01194 288 VSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQ 367 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcC
Confidence 356788899999999999998642111 00 100 0011123599999999997532 24699999999999
Q ss_pred CCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCCCCHHHH
Q 001580 70 GSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSAFEPARY 137 (1050)
Q Consensus 70 G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~~~~~~~ 137 (1050)
|++++|+||||||||||+++|+|+++|++|.+.. ++..++||+|++.+|++|+++|.. ....+++.
T Consensus 368 G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~--~~~~~~~~ 445 (555)
T TIGR01194 368 GDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDEG--EHASLDNA 445 (555)
T ss_pred CcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhcccc--cchhHHHH
Confidence 9999999999999999999999999999887542 234599999999999999999952 23345667
Q ss_pred HHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHc-cccC
Q 001580 138 EKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIR-GELS 216 (1050)
Q Consensus 138 ~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~-~~~~ 216 (1050)
.++++.+++.+.++.+|+|++|. .+||||||||++|||||+.+|+++||||||++||+++++.+.+.+.+ ....
T Consensus 446 ~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~ 520 (555)
T TIGR01194 446 QQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQ 520 (555)
T ss_pred HHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhC
Confidence 78899999999999999999884 68999999999999999999999999999999999999999886653 3346
Q ss_pred CcEEEEeccCcchhhhcCEEEEEcCCeEeec
Q 001580 217 GKTRVLVTNQLHFLSQVDRIILVHEGMVKEE 247 (1050)
Q Consensus 217 g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~ 247 (1050)
|+|+|+|||+++.+..||+|++|++|++++.
T Consensus 521 ~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 521 GKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred CCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 8999999999999999999999999998863
No 346
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.1e-38 Score=332.86 Aligned_cols=201 Identities=54% Similarity=0.966 Sum_probs=177.1
Q ss_pred EEEEeEEEEeCCCCC--CCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEEeCcEEEEecCCCCCc
Q 001580 42 ISIRNGYFSWDSKAE--RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVIRGTVAYVPQVSWIFN 119 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~--~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~~~~i~~v~Q~~~l~~ 119 (1050)
|+++|++|.|+.+.. +++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+. +.+.|+|++|+|.+++
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~-~~g~i~~~~q~~~l~~ 79 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVS-VPGSIAYVSQEPWIQN 79 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEE-EcCEEEEEecCchhcc
Confidence 478999999974321 3799999999999999999999999999999999999999987754 5668999999999999
Q ss_pred ccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcC
Q 001580 120 ATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALD 199 (1050)
Q Consensus 120 ~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD 199 (1050)
.|++||+.++.....++...+.+.+++.+.++..+.+..+.++....+||||||||++|||||+.+|+++||||||++||
T Consensus 80 ~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD 159 (204)
T cd03250 80 GTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVD 159 (204)
T ss_pred CcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 99999999875555555556677778888898888888888888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-ccccCCcEEEEeccCcchhhhcCEEEEEcCCe
Q 001580 200 AHVGRQVFDRCI-RGELSGKTRVLVTNQLHFLSQVDRIILVHEGM 243 (1050)
Q Consensus 200 ~~~~~~l~~~l~-~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~ 243 (1050)
+.+.+++++.++ ....+|.|+|++||+++.+..+|++++|++|+
T Consensus 160 ~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 160 AHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999988654 34445899999999999988899999999884
No 347
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=2.1e-38 Score=332.59 Aligned_cols=182 Identities=29% Similarity=0.470 Sum_probs=160.5
Q ss_pred cEEEEEEEEEeCCC----CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccc--cCCccEEEECCeecCCCChHH
Q 001580 665 SIKFEDVVLRYRPE----LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMD 738 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~----~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~--~p~~G~i~~~g~~i~~~~~~~ 738 (1050)
.++++||+++|+.. ..++++|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 38999999999642 246999999999999999999999999999999999999 9999999999998864 35
Q ss_pred HhhheEEEcCCcccccc-cHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHH
Q 001580 739 LRKILGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~-tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAral 817 (1050)
+++.++|+||++.+|.. |+++|+.+.. . + ..||||||||++|||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~--~-------------------~~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------K--L-------------------RGLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------H--h-------------------ccCCHHHHHHHHHHHHH
Confidence 67889999999988865 9999885310 0 0 06999999999999999
Q ss_pred ccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCch-hhhh-cCEEEEEeCCEEEEec
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN-TIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 818 l~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~-~~~~-~d~i~vl~~G~i~~~g 882 (1050)
+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++ .+.. ||++++|++|++++.|
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999875 4799999999997 5654 9999999999998754
No 348
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-38 Score=340.71 Aligned_cols=214 Identities=33% Similarity=0.526 Sum_probs=184.1
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE------------eCcEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGTVA 109 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~------------~~~i~ 109 (1050)
|+++|++++|+.. ++++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+... +..++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999642 2479999999999999999999999999999999999999998865321 23599
Q ss_pred EEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 001580 110 YVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 188 (1050)
Q Consensus 110 ~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~v 188 (1050)
|++|++.++..||+||+.++.. .....+....+.+++.+.++.++.+..+..+....+|||||||||+|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999988899999998643 233445555666778888888877777778888899999999999999999999999
Q ss_pred EEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcCh
Q 001580 189 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 257 (1050)
Q Consensus 189 llLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 257 (1050)
+||||||++||+.+++.+.+.+.+.. +++|+|++||+++++..||++++|++|++++.|+++++....
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 227 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQG 227 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcC
Confidence 99999999999999999999887664 489999999999999889999999999999999888776543
No 349
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=3e-38 Score=383.11 Aligned_cols=235 Identities=24% Similarity=0.387 Sum_probs=187.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCC
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPNPPLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGE 81 (1050)
Q Consensus 2 ~~~i~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGs 81 (1050)
...++++.+++++++|+.+++..++....+.++..+....|+++|++|+|+. ++++|+|+||++++|++++|+|+|||
T Consensus 283 ~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGs 360 (547)
T PRK10522 283 VGALPTLLSAQVAFNKLNKLALAPYKAEFPRPQAFPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGS 360 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccccccccCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCC
Confidence 3567788899999999999986543221111111111235999999999973 34799999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCCCCeeE------------EeCcEEEEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHH
Q 001580 82 GKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHD 149 (1050)
Q Consensus 82 GKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~ 149 (1050)
|||||+++|+|+++|++|.+.. ++..|+||+|+|.+|++|+++| +...++++..+.++.+++...
T Consensus 361 GKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~ 437 (547)
T PRK10522 361 GKSTLAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHK 437 (547)
T ss_pred CHHHHHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchh
Confidence 9999999999999999886532 2346999999999999999998 333444555566666666554
Q ss_pred HhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccc-cCCcEEEEeccCcc
Q 001580 150 LDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLH 228 (1050)
Q Consensus 150 ~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~-~~g~t~ilvtH~~~ 228 (1050)
... +++. .+|.+||||||||++|||||+++|+++|||||||+||+++++.+.+.+.+.. ..++|+|+|||+++
T Consensus 438 ~~~-~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~ 511 (547)
T PRK10522 438 LEL-EDGR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDH 511 (547)
T ss_pred hhc-cccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechH
Confidence 432 2111 1378999999999999999999999999999999999999999988776443 24799999999999
Q ss_pred hhhhcCEEEEEcCCeEeec
Q 001580 229 FLSQVDRIILVHEGMVKEE 247 (1050)
Q Consensus 229 ~l~~~d~i~~l~~G~i~~~ 247 (1050)
.+..+|+|++|++|++++.
T Consensus 512 ~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 512 YFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred HHHhCCEEEEEECCEEEEe
Confidence 9999999999999999874
No 350
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=359.91 Aligned_cols=203 Identities=28% Similarity=0.419 Sum_probs=172.1
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCcEEE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAY 110 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~i~~ 110 (1050)
.|+++|++++|+. ++++|+|+||++++|++++|+|||||||||||++|+|+.+|++|.+.. .++.|||
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 5899999999941 357999999999999999999999999999999999999999886542 1245999
Q ss_pred EecCCCCC-cccHHHHhccCCCC---CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 001580 111 VPQVSWIF-NATVRDNILFGSAF---EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 182 (1050)
Q Consensus 111 v~Q~~~l~-~~TV~eni~~g~~~---~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL 182 (1050)
|+|++.+| ..||+|||.|+... .. .+....++..++.+..+..+ .+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARAL 149 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRAI 149 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 99999998 67999999987431 11 23445566666665554444 58999999999999999
Q ss_pred ccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 183 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 183 ~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
+.+|++|||||||++||+.+++.+.+.+.+..+ .|.|+|+||||++++.. +|+|++|++|++++.|+++++.++
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 999999999999999999999999998877654 48999999999998764 799999999999999999988654
No 351
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-38 Score=339.25 Aligned_cols=218 Identities=32% Similarity=0.558 Sum_probs=187.0
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE------------eCcEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGTVA 109 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~------------~~~i~ 109 (1050)
++++|++++|+. ++++|+|+||+|++|++++|+|+||||||||+++|+|+.+|++|.+... +..++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999963 2569999999999999999999999999999999999999998865431 23499
Q ss_pred EEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 001580 110 YVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 188 (1050)
Q Consensus 110 ~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~v 188 (1050)
|++|++++++.||+||+.++.. .........++.+++.+.++.++.+..+.++.+..+|||||||||+|||||+.+|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999998999999988643 223334455666778777888888888888888899999999999999999999999
Q ss_pred EEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcChHHHHH
Q 001580 189 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQK 262 (1050)
Q Consensus 189 llLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 262 (1050)
+||||||++||+.+...+.+.+..... |+|+|++||+++++..||++++|++|++++.|+.+++......|+.
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~ 231 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSK-GRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAE 231 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHH
Confidence 999999999999999999998876655 8999999999999988999999999999999998887665444443
No 352
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.4e-39 Score=327.22 Aligned_cols=215 Identities=24% Similarity=0.485 Sum_probs=187.4
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.+++++|+++|++. .|++|+||.++||+++|++|||||||||++++|+|+++|++|+|.++|.+++. ..+.+||
T Consensus 2 ~L~ie~vtK~Fg~k--~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~----~~~~rIG 75 (300)
T COG4152 2 ALEIEGVTKSFGDK--KAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQ----EIKNRIG 75 (300)
T ss_pred ceEEecchhccCce--eeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhh----hhhhhcc
Confidence 38999999999754 79999999999999999999999999999999999999999999999998864 5678999
Q ss_pred EEcCCcccccc-cHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
|+|.+..|+.. ||.|.|.++.. ....++. ..+..|++++. +--...+....||-|++|++.+..+++++
T Consensus 76 yLPEERGLy~k~tv~dql~yla~LkGm~~~e~~-----~~~~~wLer~~--i~~~~~~kIk~LSKGnqQKIQfisaviHe 148 (300)
T COG4152 76 YLPEERGLYPKMTVEDQLKYLAELKGMPKAEIQ-----KKLQAWLERLE--IVGKKTKKIKELSKGNQQKIQFISAVIHE 148 (300)
T ss_pred cChhhhccCccCcHHHHHHHHHHhcCCcHHHHH-----HHHHHHHHhcc--ccccccchHHHhhhhhhHHHHHHHHHhcC
Confidence 99999999965 99999876543 2333333 33556777753 33344566678999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 892 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 892 (1050)
|+++|||||+|||||.+.+.+.+.+.++. +|.|||+.||+|+-++. ||+++.|++|+.|-+|+.++..+..+
T Consensus 149 PeLlILDEPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~G~v~~ir~~~G 222 (300)
T COG4152 149 PELLILDEPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLYGTVEDIRRSFG 222 (300)
T ss_pred CCEEEecCCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEEeccHHHHHHhcC
Confidence 99999999999999999999999999876 58999999999999988 99999999999999999999987543
No 353
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-38 Score=323.84 Aligned_cols=206 Identities=28% Similarity=0.400 Sum_probs=172.3
Q ss_pred CcEEEEeEEEEeCCCC-CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------------e
Q 001580 40 PAISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------R 105 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------~ 105 (1050)
+.++++|+++.|+.+. ..++|++|||+|.+||.+||+|+||||||||.++|+|+.+|+.|.+..- .
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 4689999999997432 1259999999999999999999999999999999999999998876431 3
Q ss_pred CcEEEEecCCCC---CcccHHHHhccCCCC-----CHHHHHHHHHHhCcHHH-HhcCCCCCcccccCCCCCCCHHHHHHH
Q 001580 106 GTVAYVPQVSWI---FNATVRDNILFGSAF-----EPARYEKAIDVTSLQHD-LDLLPGGDVTEIGERGVNISGGQKQRV 176 (1050)
Q Consensus 106 ~~i~~v~Q~~~l---~~~TV~eni~~g~~~-----~~~~~~~~~~~~~l~~~-~~~~~~g~~t~vg~~g~~LSGGqrqRv 176 (1050)
+.|-+|+|||.- +..||++.|.-+... ...+..++++..++... ++..| .+|||||||||
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRi 150 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRI 150 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHH
Confidence 459999999963 356888888643221 12345566777777654 44444 58999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhh
Q 001580 177 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 177 ~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
||||||..+|++||||||||+||+..+..|++.+.+..+ ++-|.|+||||+..+.+ ||||++|++|.+++.++.+++.
T Consensus 151 aIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 151 AIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred HHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 999999999999999999999999999999998877643 58899999999999987 7999999999999999999987
Q ss_pred cC
Q 001580 255 NN 256 (1050)
Q Consensus 255 ~~ 256 (1050)
+.
T Consensus 231 ~~ 232 (252)
T COG1124 231 SH 232 (252)
T ss_pred cC
Confidence 66
No 354
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2.5e-38 Score=328.72 Aligned_cols=172 Identities=29% Similarity=0.476 Sum_probs=155.5
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH-HHhhhe
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM-DLRKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~-~~r~~i 743 (1050)
.++++|++++| +++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++. ..|+.+
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 38999999998 79999999999999999999999999999999999999999999999999887643 467789
Q ss_pred EEEcCCc---ccc-cccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 744 GIIPQSP---VLF-SGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 744 ~~v~Q~~---~lf-~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
+|+||++ .++ ..|+++|+.+... ||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 344 4699999864210 99999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEE
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRV 878 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i 878 (1050)
+|++|||||||++||+.+++.+.+.|+++. +++|+|++||+++++.. ||++++|++|++
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999864 47899999999999987 999999999974
No 355
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-38 Score=338.01 Aligned_cols=211 Identities=29% Similarity=0.495 Sum_probs=183.3
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE------------eCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~------------~~~i 108 (1050)
.|+++|++|+|+. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|.+..- +..+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 3789999999963 2469999999999999999999999999999999999999998865321 2359
Q ss_pred EEEecCCCCCcccHHHHhccCCCC-CHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 001580 109 AYVPQVSWIFNATVRDNILFGSAF-EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 187 (1050)
Q Consensus 109 ~~v~Q~~~l~~~TV~eni~~g~~~-~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~ 187 (1050)
+|++|++.++..||+||+.++... ...+....++.+++.+.++.++.+..+.++....+|||||||||+|||||+.+|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 999999998877999999986432 3345555667778888888888777777888889999999999999999999999
Q ss_pred EEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhh
Q 001580 188 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 188 vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
++||||||++||+.+++++++.+.... +|+|+|++||+++++..||++++|++|++++.|+.+++.
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 225 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELL 225 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999887664 589999999999999889999999999999888877664
No 356
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.9e-38 Score=336.79 Aligned_cols=193 Identities=25% Similarity=0.394 Sum_probs=160.4
Q ss_pred EEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCCh----HHHhhhe
Q 001580 668 FEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL----MDLRKIL 743 (1050)
Q Consensus 668 ~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~----~~~r~~i 743 (1050)
++||++.|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..++. ...++.+
T Consensus 1 i~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGDK--IILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECCE--EEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 46899999643 69999999999999999999999999999999999999999999999999765432 2356789
Q ss_pred EEEcCCccccc-ccHHHhcccCCC---CC----HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 744 GIIPQSPVLFS-GTVRFNLDPFSE---HS----DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 744 ~~v~Q~~~lf~-~tv~~nl~~~~~---~~----~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
+|++|++.+|. .|+++|+.+... .. .+++.++++.. |++........+||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~lS~G~~qr~~lar 147 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKV-----------GLNLKLKQKIYELSGGEQQRVALAR 147 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CchhhhcCChhhCCHHHHHHHHHHH
Confidence 99999999887 599999975211 11 12233333333 3444445556789999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhhcCEEEEE
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLL 873 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl 873 (1050)
||+++|++|||||||++||+.+.+.+.+.|+++. .+.|+|++||+++.+..||++++|
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 148 AILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999999865 378999999999987779999875
No 357
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.9e-38 Score=376.81 Aligned_cols=215 Identities=25% Similarity=0.416 Sum_probs=181.6
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHh-hhe
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLR-KIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r-~~i 743 (1050)
.++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++..++ +.+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 4999999999964 3699999999999999999999999999999999999999999999999999877766654 469
Q ss_pred EEEcCCcccccc-cHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
||+||++.++.. |+.+|+.+...... +.. ..+.++++. .|++........+|||||||||+|||||+.+|+
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~-~~~-----~~~~~~l~~--~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~ 160 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQ-ASM-----QKMKQLLAA--LGCQLDLDSSAGSLEVADRQIVEILRGLMRDSR 160 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccch-HHH-----HHHHHHHHH--cCCCccccCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 999999988875 99999976432111 111 112233333 244444555667899999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
||||||||++||+.+...+.+.|+++. +++|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 161 lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 161 ILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 999999999999999999999998864 47899999999999876 99999999999999999998764
No 358
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-38 Score=357.49 Aligned_cols=204 Identities=25% Similarity=0.378 Sum_probs=170.9
Q ss_pred CCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCcE
Q 001580 39 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTV 108 (1050)
Q Consensus 39 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~i 108 (1050)
++.|+++|++++|+ ++++|+|+||++++||+++|+|||||||||||++|+|+++|++|.+.. .++.|
T Consensus 4 ~~~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~i 80 (351)
T PRK11432 4 KNFVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDI 80 (351)
T ss_pred CcEEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCE
Confidence 35799999999996 356999999999999999999999999999999999999999886542 12469
Q ss_pred EEEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHH
Q 001580 109 AYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 180 (1050)
Q Consensus 109 ~~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAr 180 (1050)
|||+|++.+| ..||+|||.|+.. ... ++....++..++.+..+. ...+|||||||||+|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r-----------~~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDR-----------YVDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHHH
Confidence 9999999988 5799999998742 111 233344455555443333 34689999999999999
Q ss_pred HHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 181 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 181 aL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
||+.+|++|||||||++||+..+.++.+.+.+..+ .|.|+|+||||++++.. +|+|++|++|++++.|+++++...
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999998876644 48999999999999755 799999999999999999887654
No 359
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-38 Score=341.49 Aligned_cols=201 Identities=27% Similarity=0.430 Sum_probs=164.8
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------EeC
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IRG 106 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~~~ 106 (1050)
|+++|++++|+. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|.+.. .+.
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 57999999999999999999999999999999999999999876532 123
Q ss_pred cEEEEecCCCCCc-ccHHHHhccCCC----CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHH
Q 001580 107 TVAYVPQVSWIFN-ATVRDNILFGSA----FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 177 (1050)
Q Consensus 107 ~i~~v~Q~~~l~~-~TV~eni~~g~~----~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~ 177 (1050)
.|+|++|++.++. .||+||+.++.. .... +....++..++.... .....+|||||||||+
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 5999999998874 699999987521 1221 222334444443222 2334689999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 178 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 178 LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
|||||+.+|+++||||||++||+.++..+++.+.+... .|+|+|+||||++++.. ||++++|++|++++.|+++++..
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999998877654 48999999999999875 79999999999999999887654
Q ss_pred C
Q 001580 256 N 256 (1050)
Q Consensus 256 ~ 256 (1050)
.
T Consensus 227 ~ 227 (235)
T cd03261 227 S 227 (235)
T ss_pred C
Confidence 3
No 360
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.9e-37 Score=340.07 Aligned_cols=223 Identities=23% Similarity=0.369 Sum_probs=191.8
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCc
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 107 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~ 107 (1050)
..|+++|++++|+.. .+.+|+++||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..
T Consensus 18 ~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~ 96 (257)
T cd03288 18 GEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSR 96 (257)
T ss_pred ceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhhh
Confidence 459999999999742 357999999999999999999999999999999999999999886543 1335
Q ss_pred EEEEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 001580 108 VAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 187 (1050)
Q Consensus 108 i~~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~ 187 (1050)
|+|++|+|++++.||+||+..........+....+..++.+.++.++.+..+.++..+.+||||||||++|||||+.+|+
T Consensus 97 i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~ 176 (257)
T cd03288 97 LSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSS 176 (257)
T ss_pred EEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998889999997653333445556667778888888888888888999999999999999999999999999
Q ss_pred EEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcC-hHHHHHHH
Q 001580 188 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN-GELFQKLM 264 (1050)
Q Consensus 188 vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~l~ 264 (1050)
++||||||++||+.++..+++.+.+. .++.|+|++||+++.+..||+|++|++|++++.|+++++... .+.|+.++
T Consensus 177 llllDEPt~gLD~~~~~~l~~~l~~~-~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 177 ILIMDEATASIDMATENILQKVVMTA-FADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHh-cCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 99999999999999999999877654 358999999999999988999999999999999999888654 34455544
No 361
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=9.2e-38 Score=342.14 Aligned_cols=217 Identities=19% Similarity=0.298 Sum_probs=175.3
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhcc--ccCCccEEEECCeecCCCChHHHhh-
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRI--VELERGRILIDGFDIAKFGLMDLRK- 741 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~--~~p~~G~i~~~g~~i~~~~~~~~r~- 741 (1050)
.++++|+++.|++. ++|+|+||+|++||++||+|+||||||||+++|+|+ ++|++|+|.++|.++...++...++
T Consensus 7 ~l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNEN--EILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCCE--EeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 48999999999643 699999999999999999999999999999999998 6899999999999998877665554
Q ss_pred heEEEcCCcccccc-cHHHhcccCCC----C---CHHHHHHHHHHhcHHHHHHHccCCcc-hhhhcCCC-CCChhHHHHH
Q 001580 742 ILGIIPQSPVLFSG-TVRFNLDPFSE----H---SDADLWEALERAHLKDAIRRNSLGLD-AQVSEAGE-NFSVGQRQLL 811 (1050)
Q Consensus 742 ~i~~v~Q~~~lf~~-tv~~nl~~~~~----~---~~~~~~~~l~~~~~~~~i~~~p~gl~-t~v~~~~~-~LSgGq~qrl 811 (1050)
.++|+||++.+|.+ |+.+|+.+... . .+.+..+.. ..+.+.++.+ |+. +..+.... .||||||||+
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~--~l~~~~~~~~~~~~LSgG~~qrv 160 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFL--EIINEKLKLV--GMDPSFLSRNVNEGFSGGEKKRN 160 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHH--HHHHHHHHHc--CCchhhhccccccCCCHHHHHHH
Confidence 48999999998876 88888753211 0 000000000 1122333332 343 33445444 5999999999
Q ss_pred HHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh--cCEEEEEeCCEEEEecChhHH
Q 001580 812 SLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID--CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 812 ~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~--~d~i~vl~~G~i~~~g~~~el 887 (1050)
+|||||+.+|+||||||||++||+.+.+.+.+.|+++. .++|||++||+++.+.. ||++++|++|++++.|+++..
T Consensus 161 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 239 (252)
T CHL00131 161 EILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAELA 239 (252)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChhhh
Confidence 99999999999999999999999999999999999875 47999999999999875 899999999999999998843
No 362
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=7.3e-38 Score=341.38 Aligned_cols=209 Identities=23% Similarity=0.379 Sum_probs=173.4
Q ss_pred EEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEE
Q 001580 667 KFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGII 746 (1050)
Q Consensus 667 ~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v 746 (1050)
+++||++. .+|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.++|.++...++..+++.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEEe
Confidence 45677774 27999999999999999999999999999999999986 499999999999888877888889999
Q ss_pred cCCcccc-cccHHHhcccCCCC--CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc----
Q 001580 747 PQSPVLF-SGTVRFNLDPFSEH--SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR---- 819 (1050)
Q Consensus 747 ~Q~~~lf-~~tv~~nl~~~~~~--~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~---- 819 (1050)
||++.++ ..|+++|+.+.... ...+. ...+.+.++.+ |++.........||||||||++|||||+.
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~ 147 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAV-----ASALNEVAEAL--GLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPD 147 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHH-----HHHHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhccccc
Confidence 9998654 56999999754221 11111 11223344443 45555566677899999999999999997
Q ss_pred ---CCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 820 ---RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 820 ---~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
+|++|||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 148 ~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 148 INPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred cCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 679999999999999999999999999875 47899999999998866 99999999999999999988854
No 363
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.4e-37 Score=333.91 Aligned_cols=206 Identities=27% Similarity=0.413 Sum_probs=181.9
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVA 109 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~ 109 (1050)
|+++|++|+|+.. ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..++
T Consensus 3 l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (221)
T cd03244 3 IEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRIS 81 (221)
T ss_pred EEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEE
Confidence 7899999999732 357999999999999999999999999999999999999999886532 134599
Q ss_pred EEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEE
Q 001580 110 YVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVF 189 (1050)
Q Consensus 110 ~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vl 189 (1050)
|++|++.+++.||+||+.+.......+....++..++.+.++.++.+..+..+..+.+||||||||++|||||+.+|+++
T Consensus 82 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~ll 161 (221)
T cd03244 82 IIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKIL 161 (221)
T ss_pred EECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999998888999999876544555666677788888888888888888888889999999999999999999999999
Q ss_pred EEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccC
Q 001580 190 IFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGT 249 (1050)
Q Consensus 190 lLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 249 (1050)
||||||++||+.+++++++.+.+.. ++.|+|++||+++++..+|++++|++|++++.|+
T Consensus 162 llDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 162 VLDEATASVDPETDALIQKTIREAF-KDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 9999999999999999999887654 4689999999999998899999999999987764
No 364
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.3e-38 Score=341.62 Aligned_cols=194 Identities=27% Similarity=0.405 Sum_probs=158.5
Q ss_pred CceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEc-CCccccc-ccHH
Q 001580 681 PVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIP-QSPVLFS-GTVR 758 (1050)
Q Consensus 681 ~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~-Q~~~lf~-~tv~ 758 (1050)
++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...++++++|+| |++.++. .|++
T Consensus 35 ~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv~ 113 (236)
T cd03267 35 EALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPVI 113 (236)
T ss_pred eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcHH
Confidence 699999999999999999999999999999999999999999999999987543 345677899998 5566764 5999
Q ss_pred HhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCH
Q 001580 759 FNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDV 835 (1050)
Q Consensus 759 ~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~ 835 (1050)
+|+.+.. .....+..+. +...++. .|++.........||||||||++|||||+.+|++|||||||++||+
T Consensus 114 e~l~~~~~~~~~~~~~~~~~-----~~~~l~~--~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 186 (236)
T cd03267 114 DSFYLLAAIYDLPPARFKKR-----LDELSEL--LDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDV 186 (236)
T ss_pred HHHHHHHHHcCCCHHHHHHH-----HHHHHHH--cCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCH
Confidence 9985421 1122222111 1223333 2444444555678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEec
Q 001580 836 RTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYD 882 (1050)
Q Consensus 836 ~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g 882 (1050)
.+.+.+.+.|+++.+ ++|+|++||+++++.. ||++++|++|++++.|
T Consensus 187 ~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 187 VAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999998743 6899999999999876 9999999999998764
No 365
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-38 Score=329.54 Aligned_cols=181 Identities=26% Similarity=0.395 Sum_probs=158.8
Q ss_pred cEEEEEEEEEeCCC--CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccc--cCCccEEEECCeecCCCChHHHh
Q 001580 665 SIKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMDLR 740 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~--~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~--~p~~G~i~~~g~~i~~~~~~~~r 740 (1050)
.++++|+++.|++. .+++|+|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|.++. ..++
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 38999999999641 146999999999999999999999999999999999986 489999999999885 4567
Q ss_pred hheEEEcCCcccccc-cHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 741 KILGIIPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 741 ~~i~~v~Q~~~lf~~-tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
++++|++|++.+|.. |+++|+.+.. . + . +||||||||++||||++.
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~---------~-----~----~---------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFSA---------L-----L----R---------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHHH---------H-----H----h---------------cCCHHHhHHHHHHHHHhc
Confidence 889999999988875 9999986310 0 0 0 699999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchh-h-hhcCEEEEEeC-CEEEEec
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT-I-IDCDRILLLDS-GRVLEYD 882 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~-~-~~~d~i~vl~~-G~i~~~g 882 (1050)
+|++|||||||++||+.+...+++.|+++. .++|+|++||+++. + ..||+|++|++ |++++.|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999865 47899999999984 5 45999999998 9998865
No 366
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.2e-37 Score=317.41 Aligned_cols=159 Identities=30% Similarity=0.538 Sum_probs=147.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH-HHhhheE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM-DLRKILG 744 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~-~~r~~i~ 744 (1050)
++++|++++|++. ++++++||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++. ..++.++
T Consensus 1 l~~~~l~~~~~~~--~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGGV--KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 4789999999653 699999999999999999999999999999999999999999999999999877654 4567899
Q ss_pred EEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 001580 745 IIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 824 (1050)
Q Consensus 745 ~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~il 824 (1050)
|+|| ||||||||++||||++++|++|
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9998 9999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEE
Q 001580 825 VLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 880 (1050)
Q Consensus 825 lLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 880 (1050)
||||||++||+.+++.+.+.|+++. ++.|+|++||+++.+.. ||++++|++|++++
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999874 47899999999998876 99999999999875
No 367
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=9.6e-38 Score=319.08 Aligned_cols=163 Identities=33% Similarity=0.432 Sum_probs=148.6
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++|++++|+++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 4689999999643 36999999999999999999999999999999999999999999999873 57999
Q ss_pred EcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEE
Q 001580 746 IPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILV 825 (1050)
Q Consensus 746 v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ill 825 (1050)
+||++.+++.|+++|+.+. ....||||||||++||||++++|++||
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999998888999998642 135799999999999999999999999
Q ss_pred EeccCcCCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEeCC
Q 001580 826 LDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSG 876 (1050)
Q Consensus 826 LDEpts~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G 876 (1050)
|||||++||+.+.+.+.+.|++. ++|+|++||+++....||++++|++|
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 99999999999999999999885 68999999999877679999999865
No 368
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=347.59 Aligned_cols=207 Identities=29% Similarity=0.463 Sum_probs=169.6
Q ss_pred cEEEEeEEEEeCCCC--CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE--------------
Q 001580 41 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------- 104 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------- 104 (1050)
.|+++|++|+|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.+...
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999997432 2369999999999999999999999999999999999999998865331
Q ss_pred ----------------------eCcEEEEecCC--CCCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcC
Q 001580 105 ----------------------RGTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLL 153 (1050)
Q Consensus 105 ----------------------~~~i~~v~Q~~--~l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~ 153 (1050)
+..||||+|+| .++..||+|||.|+.. ... ++..+.++..++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~---- 157 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDES---- 157 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----
Confidence 23489999986 5677899999998732 222 223344555555311
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-
Q 001580 154 PGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ- 232 (1050)
Q Consensus 154 ~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~- 232 (1050)
..+....+|||||||||+|||||+.+|++|||||||++||+.++..+++.+......|+|+|+||||++++..
T Consensus 158 ------~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 158 ------YLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred ------hhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 1233456899999999999999999999999999999999999999999887665568999999999998764
Q ss_pred cCEEEEEcCCeEeeccChhhhhcCh
Q 001580 233 VDRIILVHEGMVKEEGTFEDLSNNG 257 (1050)
Q Consensus 233 ~d~i~~l~~G~i~~~g~~~~l~~~~ 257 (1050)
||||++|++|++++.|+++++....
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~~ 256 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSDN 256 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcCH
Confidence 8999999999999999998877654
No 369
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=7e-38 Score=350.86 Aligned_cols=202 Identities=25% Similarity=0.404 Sum_probs=167.6
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-----------EeCcE
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTV 108 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-----------~~~~i 108 (1050)
..|+++|++|+|+ ++.+|+||||+|++|+++||+||||||||||+++|+|+++|++|.+.. .+..|
T Consensus 6 ~~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred ceEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 4699999999996 357999999999999999999999999999999999999999886543 12459
Q ss_pred EEEecCCCCC-cccHHHHhccC-CC--CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHH
Q 001580 109 AYVPQVSWIF-NATVRDNILFG-SA--FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 180 (1050)
Q Consensus 109 ~~v~Q~~~l~-~~TV~eni~~g-~~--~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAr 180 (1050)
|||||++.++ ..||+||+.+. .. .... +....++..++.... .....+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKA-----------DAKVGELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHh-----------cCchhhCCHHHHHHHHHHH
Confidence 9999999887 68999999752 11 1111 222333444433222 2234689999999999999
Q ss_pred HHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 181 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 181 aL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
||+++|++++|||||+||||.+++++++.+.+...+|+|+|++||+++++.. ||||++|++|++++.|+++++..
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999887766568999999999999976 89999999999999999988753
No 370
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.1e-37 Score=336.41 Aligned_cols=202 Identities=25% Similarity=0.356 Sum_probs=163.4
Q ss_pred ceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC----CccEEEECCeecCCCChHHHhhheEEEcCCcc-cc-c-
Q 001580 682 VLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL----ERGRILIDGFDIAKFGLMDLRKILGIIPQSPV-LF-S- 754 (1050)
Q Consensus 682 ~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p----~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~-lf-~- 754 (1050)
+++|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... ...++.++|+||++. .| .
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 57899999999999999999999999999999999999 899999999998653 223467999999995 34 3
Q ss_pred ccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcc---hhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 001580 755 GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLD---AQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDE 828 (1050)
Q Consensus 755 ~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~---t~v~~~~~~LSgGq~qrl~lArall~~p~illLDE 828 (1050)
.|+.+|+.+.. ....... ...+.+.++.+ |++ +.....+..||||||||++||||++++|+||||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDE 151 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQA-----RALILEALEAV--GLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADE 151 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHH-----HHHHHHHHHHc--CCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 48888874211 0111110 01122333332 333 45566678899999999999999999999999999
Q ss_pred cCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 001580 829 ATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEG 892 (1050)
Q Consensus 829 pts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~ 892 (1050)
||++||+.+++.+.+.|+++.+ ++|||++||+++++.. ||++++|++|++++.|+++++.....
T Consensus 152 Pt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 218 (230)
T TIGR02770 152 PTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPK 218 (230)
T ss_pred CccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcC
Confidence 9999999999999999998653 7899999999999976 99999999999999999999976543
No 371
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.3e-38 Score=355.94 Aligned_cols=203 Identities=29% Similarity=0.421 Sum_probs=170.9
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCcEE
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVA 109 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~i~ 109 (1050)
+.|+++|++++|+. +.+|+|+||++++|++++|+|||||||||||++|+|+.+|++|.+.. .++.||
T Consensus 3 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig 79 (353)
T TIGR03265 3 PYLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYG 79 (353)
T ss_pred cEEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 46999999999963 56999999999999999999999999999999999999999886543 124599
Q ss_pred EEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHH
Q 001580 110 YVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 181 (1050)
Q Consensus 110 ~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAra 181 (1050)
||+|++.+| ..||+||+.|+.. .+. .+..+.++..++.+..+ ....+|||||||||+||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~-----------~~~~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSER-----------KYPGQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhh-----------CChhhCCHHHHHHHHHHHH
Confidence 999999988 6899999998732 111 23344455555544333 3446899999999999999
Q ss_pred HccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 182 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 182 L~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
|+.+|+++||||||++||+.+++++.+.+.+..+ .|.|+|+||||++++.. +|+|++|++|++++.|+++++..+
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999998877654 48999999999999765 799999999999999999888754
No 372
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=375.55 Aligned_cols=216 Identities=22% Similarity=0.344 Sum_probs=181.2
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHH-hhhe
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL-RKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~-r~~i 743 (1050)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++... ++.+
T Consensus 5 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGPV--HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCCe--EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 38999999999643 69999999999999999999999999999999999999999999999999987776543 4579
Q ss_pred EEEcCCcccccc-cHHHhcccCCC----C------CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHH
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFSE----H------SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLS 812 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~~----~------~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~ 812 (1050)
+|+||++.+|.. |+++|+.+... . ...+.. ..+.+.++.+ |+.........+||||||||++
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv~ 155 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMR-----VRAAMMLLRV--GLKVDLDEKVANLSISHKQMLE 155 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHHH
Confidence 999999988865 99999964311 0 111111 1233344443 4444455666789999999999
Q ss_pred HHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 813 LSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 813 lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|||||+.+|+||||||||++||+.+...+.+.|+++. .++|||+|||+++++.. ||+|++|++|+++..|+++++..
T Consensus 156 ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 156 IAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 9999999999999999999999999999999999864 47899999999999977 99999999999999999988753
No 373
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=344.39 Aligned_cols=206 Identities=26% Similarity=0.382 Sum_probs=172.0
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i 108 (1050)
.|+++|++++|+....+++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+.. .++.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 589999999997433356999999999999999999999999999999999999999886532 12358
Q ss_pred EEEecCCC--CCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHH
Q 001580 109 AYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 179 (1050)
Q Consensus 109 ~~v~Q~~~--l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LA 179 (1050)
|||+|+|. ++..||+|||.|+.. .+. ++...+++..++.+..+.. ..+|||||||||+||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKERE-----------PARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 99999984 457899999998632 122 2344556666665544433 358999999999999
Q ss_pred HHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcCh
Q 001580 180 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 257 (1050)
Q Consensus 180 raL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 257 (1050)
|||+.+|++|||||||++||+.+++.+++.+.+... .|+|+|++||+++++..||+|++|++|+++..|+++++....
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSRG 231 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcCh
Confidence 999999999999999999999999999998877654 489999999999998779999999999999999988876554
No 374
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.5e-37 Score=328.16 Aligned_cols=194 Identities=24% Similarity=0.332 Sum_probs=164.7
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|+++.|++. ++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.... ..++++++|
T Consensus 1 l~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDGR--ALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCCc--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 4689999999653 6999999999999999999999999999999999999999999999999986543 467889999
Q ss_pred EcCCccccc-ccHHHhcccCCC-CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCE
Q 001580 746 IPQSPVLFS-GTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKI 823 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~~-~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~i 823 (1050)
+||++.++. .|+++|+.+... ..++++.++++..++.++. .....+||||||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFE-----------DRPVAQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhh-----------cCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998764 699999976432 2344556666666554332 233467999999999999999999999
Q ss_pred EEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEE
Q 001580 824 LVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLL 873 (1050)
Q Consensus 824 llLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl 873 (1050)
|||||||++||+.+++.+.+.|++.. +++|+|++||+...+.. |++++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998764 47899999999887655 9999876
No 375
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=374.10 Aligned_cols=215 Identities=22% Similarity=0.367 Sum_probs=181.0
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC--CccEEEECCeecCCCChHH-Hhh
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL--ERGRILIDGFDIAKFGLMD-LRK 741 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p--~~G~i~~~g~~i~~~~~~~-~r~ 741 (1050)
.++++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+... .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 3899999999964 3699999999999999999999999999999999999996 8999999999998766554 467
Q ss_pred heEEEcCCcccccc-cHHHhcccCCC------CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHH
Q 001580 742 ILGIIPQSPVLFSG-TVRFNLDPFSE------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLS 814 (1050)
Q Consensus 742 ~i~~v~Q~~~lf~~-tv~~nl~~~~~------~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lA 814 (1050)
.++|+||++.+|.. |+++|+.+... ....+.. ..+.++++.+ |++........+||||||||++||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la 155 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMY-----LRAQKLLAQL--KLDINPATPVGNLGLGQQQLVEIA 155 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHHHHH
Confidence 79999999988865 99999975421 1111111 1133444443 444445566678999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
|||+.+|+||||||||++||+.++..+.+.|.++. +++|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 156 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 156 KALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 99999999999999999999999999999998864 47899999999999877 9999999999999999988764
No 376
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=373.06 Aligned_cols=215 Identities=24% Similarity=0.364 Sum_probs=179.5
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH-Hhhhe
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD-LRKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~-~r~~i 743 (1050)
.|+++|++++|++ .++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 3899999999964 36999999999999999999999999999999999999999999999999987655544 35679
Q ss_pred EEEcCCcccccc-cHHHhcccCCC-------CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~~-------~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
+|+||++.++.. |+++|+.+... ....+.. ..+.+.++.+ |+.........+||||||||++|||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 154 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMY-----AEADKLLARL--NLRFSSDKLVGELSIGEQQMVEIAK 154 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHH
Confidence 999999988865 99999975321 1111111 1123344443 4444445556789999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
||+.+|++|||||||++||+.+...+++.|+++. .+.|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (501)
T PRK10762 155 VLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLT 229 (501)
T ss_pred HHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCC
Confidence 9999999999999999999999999999998864 47899999999999877 9999999999999999988764
No 377
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1e-36 Score=377.66 Aligned_cols=97 Identities=25% Similarity=0.439 Sum_probs=88.5
Q ss_pred Ccch-hhhcCCCCCChhHHHHHHHHHHHcc---CCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhh
Q 001580 791 GLDA-QVSEAGENFSVGQRQLLSLSRALLR---RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTII 865 (1050)
Q Consensus 791 gl~t-~v~~~~~~LSgGq~qrl~lArall~---~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~ 865 (1050)
|+.. ..++...+|||||+||++|||+|++ +|+++||||||+|||+.+...+++.|+++. +|.|||+|+|+++.+.
T Consensus 816 gL~~l~l~~~~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~ 895 (924)
T TIGR00630 816 GLGYIKLGQPATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIK 895 (924)
T ss_pred CCCchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 5554 3677888999999999999999997 599999999999999999999999999875 4789999999999998
Q ss_pred hcCEEEEE------eCCEEEEecChhHH
Q 001580 866 DCDRILLL------DSGRVLEYDTPEEL 887 (1050)
Q Consensus 866 ~~d~i~vl------~~G~i~~~g~~~el 887 (1050)
.||+|++| ++|+|++.|+++++
T Consensus 896 ~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 896 TADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 89999999 79999999999886
No 378
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=3.3e-34 Score=333.59 Aligned_cols=467 Identities=19% Similarity=0.202 Sum_probs=298.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhcccCh-----hHHHHHHHhhHHHHHHHHHHH
Q 001580 384 NTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPL-----GRIINRFAKDLGDIDRNVAVF 458 (1050)
Q Consensus 384 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~-----G~l~~rl~~D~~~i~~~~~~~ 458 (1050)
..+|..+....+++...+.|+......+....+-..+.++-+.....|+..... -..=+|+..|+...-.....+
T Consensus 89 l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l 168 (604)
T COG4178 89 LQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDL 168 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHH
Confidence 455666677777778888888888888888888888999988877444433322 233478999988877655555
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHH
Q 001580 459 VNMFMGQVSQLLSTFVLIGIV---------------STMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQF 523 (1050)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (1050)
...++..+..+++...++.-+ ..++.|.++..++..-.+...+.+....+.-......+.+...+
T Consensus 169 ~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~L 248 (604)
T COG4178 169 SFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSL 248 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHH
Confidence 555555555555444433311 12222332222222222222222222222222222233444555
Q ss_pred HHHHchHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHhcCccchhhhHH
Q 001580 524 GEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGAN---RWLAIRLEIVGGLMIWLTATFAVVQNGSAENQEAFA 600 (1050)
Q Consensus 524 ~e~l~gi~~Ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~ 600 (1050)
...-++...|-.|+.|+.........+.............. .|.......++.++-++.+.-. +..|..+-
T Consensus 249 vrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~-~f~g~i~~----- 322 (604)
T COG4178 249 VRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPR-YFSGQITF----- 322 (604)
T ss_pred HHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHh-hhcCcChH-----
Confidence 66677788888887776554444443333222211111111 1222222222222222211111 12222211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC------CCCCccccCCCCCCCCCCCCccEEEEEEEEE
Q 001580 601 STMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIEL------PSEAPLVIESNRPPPGWPSSGSIKFEDVVLR 674 (1050)
Q Consensus 601 ~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~~~~~~------~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~ 674 (1050)
.-+......+..+...++.+...+..+....+.+.|+.++... +.+.+.... .........+..|+++|++..
T Consensus 323 G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~l~ 401 (604)
T COG4178 323 GGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTG-RRIDFDDNADHGITLENLSLR 401 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccc-ccccccccccceeEEeeeeEE
Confidence 1111122223334445555555566666667778888877632 111111100 000000001456999999999
Q ss_pred eCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCccccc
Q 001580 675 YRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFS 754 (1050)
Q Consensus 675 y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~ 754 (1050)
-+++. +.+++.+|+|+|||.+-|.|+||||||||+|+|+|+++--+|+|.+-. -..+-|+||.|.+-.
T Consensus 402 ~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~ 469 (604)
T COG4178 402 TPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQ 469 (604)
T ss_pred CCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCC
Confidence 87654 789999999999999999999999999999999999999999987641 124789999999999
Q ss_pred ccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCc
Q 001580 755 GTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATA 831 (1050)
Q Consensus 755 ~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts 831 (1050)
||+||-|.+-. +.+|+++.++|.++++.++++++. +.+. -...||+||||||++||.|+++|++++|||+||
T Consensus 470 GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~-~~~~----W~~vLS~GEqQRlafARilL~kP~~v~LDEATs 544 (604)
T COG4178 470 GTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLD-EEDR----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATS 544 (604)
T ss_pred ccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHh-ccCc----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchh
Confidence 99999887432 268999999999999999999963 2222 345699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCcEEEEeecCchhhhhcCEEEEEe
Q 001580 832 AVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLD 874 (1050)
Q Consensus 832 ~LD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~ 874 (1050)
+||++++..+++.+++..++.|+|-|+||.....-.++.+-+.
T Consensus 545 ALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 545 ALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred ccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 9999999999999999889999999999988776666655543
No 379
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.9e-37 Score=338.86 Aligned_cols=218 Identities=17% Similarity=0.293 Sum_probs=168.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccc--cCCccEEEECCeecCCCChHHHh-hh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILIDGFDIAKFGLMDLR-KI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~--~p~~G~i~~~g~~i~~~~~~~~r-~~ 742 (1050)
++++|++++|++. ++|+|+||+|++|+++||+||||||||||+++|+|++ +|++|+|.++|.++...++...+ ..
T Consensus 2 i~~~nl~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVEDK--AILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCCe--eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 7899999999743 6999999999999999999999999999999999994 69999999999999877766554 56
Q ss_pred eEEEcCCcccccc-cHHHhcccC-CC---CCHHHHHHHHH-HhcHHHHHHHccCCcc-hhhhcCC-CCCChhHHHHHHHH
Q 001580 743 LGIIPQSPVLFSG-TVRFNLDPF-SE---HSDADLWEALE-RAHLKDAIRRNSLGLD-AQVSEAG-ENFSVGQRQLLSLS 814 (1050)
Q Consensus 743 i~~v~Q~~~lf~~-tv~~nl~~~-~~---~~~~~~~~~l~-~~~~~~~i~~~p~gl~-t~v~~~~-~~LSgGq~qrl~lA 814 (1050)
++|++|++.++.. |..+++... .. .......+..+ ...+.+.++.+ ++. ....... ..||||||||++||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~qrv~la 157 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALL--KMPEDLLTRSVNVGFSGGEKKRNDIL 157 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHc--CCChhhcccCCCCCCCHHHHHHHHHH
Confidence 9999999987654 544443211 00 00000000000 01112233322 221 1122223 36999999999999
Q ss_pred HHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhh--cCEEEEEeCCEEEEecChhHH
Q 001580 815 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID--CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 815 rall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~--~d~i~vl~~G~i~~~g~~~el 887 (1050)
||++++|+||||||||++||+.+...+.+.|+++.+ ++|||++||+++.+.. ||+|++|++|++++.|+++..
T Consensus 158 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~~~ 233 (248)
T PRK09580 158 QMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLV 233 (248)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHHHH
Confidence 999999999999999999999999999999988654 6899999999999876 899999999999999998854
No 380
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.9e-37 Score=330.19 Aligned_cols=204 Identities=34% Similarity=0.554 Sum_probs=177.1
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE------------eCcEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGTVA 109 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~------------~~~i~ 109 (1050)
|+++|+++.|+.. .+++|+|+||++++|++++|+||||||||||+++|+|+.+|++|.+... +..++
T Consensus 3 l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (220)
T cd03245 3 IEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIG 81 (220)
T ss_pred EEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEE
Confidence 7899999999632 3579999999999999999999999999999999999999998765321 23599
Q ss_pred EEecCCCCCcccHHHHhccCCC-CCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCE
Q 001580 110 YVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDV 188 (1050)
Q Consensus 110 ~v~Q~~~l~~~TV~eni~~g~~-~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~v 188 (1050)
|++|++.++..||.||+.++.. ....+....++..++.+.++..|.+..|.+.....+||||||||++|||||+.+|++
T Consensus 82 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~l 161 (220)
T cd03245 82 YVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPI 161 (220)
T ss_pred EeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999887899999987643 233455667777888888888888888888888889999999999999999999999
Q ss_pred EEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeec
Q 001580 189 FIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEE 247 (1050)
Q Consensus 189 llLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~ 247 (1050)
+||||||++||+.+++.+++.+.+... ++|+|++||+++++..||++++|++|++++.
T Consensus 162 lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~ 219 (220)
T cd03245 162 LLLDEPTSAMDMNSEERLKERLRQLLG-DKTLIIITHRPSLLDLVDRIIVMDSGRIVAD 219 (220)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHHHHhCCEEEEEeCCeEeec
Confidence 999999999999999999998876544 4899999999999877899999999998754
No 381
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.2e-37 Score=358.09 Aligned_cols=226 Identities=27% Similarity=0.469 Sum_probs=186.7
Q ss_pred cEEEEEEEEEeCCCC--CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCC----ccEEEECCeecCCCChHH
Q 001580 665 SIKFEDVVLRYRPEL--PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELE----RGRILIDGFDIAKFGLMD 738 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~--~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~----~G~i~~~g~~i~~~~~~~ 738 (1050)
.++++|+++.|.... ..+++||||+|.+||++||||.|||||||+.++|.|++++. +|+|.++|.|+-.++...
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 489999999996332 25999999999999999999999999999999999999988 899999999998888766
Q ss_pred Hh----hheEEEcCCcc-cccc--cHHHhcc----cCCCC----CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCC
Q 001580 739 LR----KILGIIPQSPV-LFSG--TVRFNLD----PFSEH----SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENF 803 (1050)
Q Consensus 739 ~r----~~i~~v~Q~~~-lf~~--tv~~nl~----~~~~~----~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~L 803 (1050)
+| +.|+|+||+|. .++. ||.+.|. ..... ...+..+.++.+++.+-... ...+.+|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 53 45999999995 5554 7766553 11111 12334444444444321111 3456899
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEE
Q 001580 804 SVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 880 (1050)
Q Consensus 804 SgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 880 (1050)
|||||||+.||+||+.+|++||+||||.+||+.+++.|.+.|+++. .|.++|+||||+..+.. ||||+||.+|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999976 47899999999999987 99999999999999
Q ss_pred ecChhHHhhcCCChHHHHH
Q 001580 881 YDTPEELLSNEGSSFSKMV 899 (1050)
Q Consensus 881 ~g~~~el~~~~~~~~~~~~ 899 (1050)
.|++++++.++...|.+..
T Consensus 236 ~G~~~~i~~~p~hpYT~~L 254 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGL 254 (539)
T ss_pred ecCHHHHHhccCCcccHHH
Confidence 9999999998877776654
No 382
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=345.22 Aligned_cols=207 Identities=25% Similarity=0.435 Sum_probs=169.1
Q ss_pred cEEEEeEEEEeCCCC--CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------
Q 001580 41 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 103 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------- 103 (1050)
+|+++|++|+|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.+..
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 378999999997321 136999999999999999999999999999999999999999886532
Q ss_pred -EeCcEEEEecCC--CCCcccHHHHhccCCC---CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHH
Q 001580 104 -IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 173 (1050)
Q Consensus 104 -~~~~i~~v~Q~~--~l~~~TV~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqr 173 (1050)
.+..||||+|+| .++..||.||+.|+.. .... ++.+.++..++...+ ......+||||||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqk 150 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQM 150 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHH
Confidence 123599999998 6778899999998732 1121 233334444443211 2234578999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 174 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 174 qRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
||++|||||+.+|+++||||||++||+.+++.+.+.+.+...+|.|+|++|||++++.. ||||++|++|+++++|++++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999877665568999999999999864 89999999999999999998
Q ss_pred hhcCh
Q 001580 253 LSNNG 257 (1050)
Q Consensus 253 l~~~~ 257 (1050)
+....
T Consensus 231 ~~~~~ 235 (288)
T PRK13643 231 VFQEV 235 (288)
T ss_pred HHcCH
Confidence 86553
No 383
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.5e-37 Score=329.07 Aligned_cols=194 Identities=25% Similarity=0.343 Sum_probs=163.4
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|+.. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.... ...+++++|
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDER--ILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECCE--EEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 7899999999643 6999999999999999999999999999999999999999999999999987643 356788999
Q ss_pred EcCCccccc-ccHHHhcccCCC----CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 746 IPQSPVLFS-GTVRFNLDPFSE----HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~~----~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
++|++.++. .|+++|+.+... ..++++.++++..++.++ .......||||||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGF-----------EDVPVRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHH-----------hhCChhhcCHHHHHHHHHHHHHhcC
Confidence 999998876 499999965321 123344555555555433 3344568999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEE
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLL 873 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl 873 (1050)
|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++++.. .+|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999999864 47899999999999977 4566655
No 384
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-37 Score=354.80 Aligned_cols=204 Identities=29% Similarity=0.425 Sum_probs=171.8
Q ss_pred CCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCcE
Q 001580 39 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTV 108 (1050)
Q Consensus 39 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~i 108 (1050)
.+.|+++|++++|+. +++|+++||++++|++++|+|||||||||||++|+|+.+|++|.+.. .++.|
T Consensus 12 ~~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~i 88 (375)
T PRK09452 12 SPLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHV 88 (375)
T ss_pred CceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCE
Confidence 346999999999963 56999999999999999999999999999999999999999876532 12359
Q ss_pred EEEecCCCCC-cccHHHHhccCCCC---CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHH
Q 001580 109 AYVPQVSWIF-NATVRDNILFGSAF---EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 180 (1050)
Q Consensus 109 ~~v~Q~~~l~-~~TV~eni~~g~~~---~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAr 180 (1050)
|||+|++.+| ..||+|||.|+... .. ++....++..++.+..+..| .+|||||||||+|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 9999999987 67999999987421 11 23344455556655554443 589999999999999
Q ss_pred HHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhh-hcCEEEEEcCCeEeeccChhhhhcC
Q 001580 181 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 181 aL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
||+.+|++|||||||++||+..+.++.+.+.+..+ .|.|+|+||||.+++. .+|+|++|++|++++.|+++++...
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999998877654 4899999999999976 4899999999999999999887654
No 385
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=8.1e-38 Score=337.29 Aligned_cols=194 Identities=26% Similarity=0.410 Sum_probs=160.8
Q ss_pred eeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCccccc-ccHHHhc
Q 001580 683 LHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFS-GTVRFNL 761 (1050)
Q Consensus 683 l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~tv~~nl 761 (1050)
|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+||++.+|. .|+.+|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 579999999999999999999999999999999999999999999999876443 2489999999887 5999998
Q ss_pred ccC-----CCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHH
Q 001580 762 DPF-----SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVR 836 (1050)
Q Consensus 762 ~~~-----~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~ 836 (1050)
.+. ....+.+.. ..+.++++. .|++.........||||||||++|||||+.+|++|||||||++||+.
T Consensus 76 ~~~~~~~~~~~~~~~~~-----~~~~~~l~~--~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~ 148 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERR-----AIVEEHIAL--VGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDAL 148 (230)
T ss_pred HHHHHhcccCCCHHHHH-----HHHHHHHHH--cCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHH
Confidence 642 112221111 112233333 24444555566789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 837 TDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 837 ~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
+++.+.+.|+++. .++|+|+|||+++++.. ||+|++|++|++++.|+..+++
T Consensus 149 ~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 149 TRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 9999999998864 37899999999999876 9999999999999999877663
No 386
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-38 Score=304.96 Aligned_cols=220 Identities=27% Similarity=0.426 Sum_probs=182.1
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCC----------
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKF---------- 734 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~---------- 734 (1050)
.++++|+.++|+.. .+|++||++-++|+++.|+|.|||||||+++||.=+-.|+.|.|.++|..|+-.
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 48999999999765 699999999999999999999999999999999999999999999999887421
Q ss_pred C---hHHHhhheEEEcCCcccccc-cHHHhcccCC----CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChh
Q 001580 735 G---LMDLRKILGIIPQSPVLFSG-TVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVG 806 (1050)
Q Consensus 735 ~---~~~~r~~i~~v~Q~~~lf~~-tv~~nl~~~~----~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgG 806 (1050)
+ ...+|.+.|+|+|+..|++. |+.+|..-.. ..+..+..+ + +..++.+ .|+.......+..||||
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e---~--Ae~~L~k--VGi~ek~~~YP~~LSGG 156 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIE---R--AEKYLAK--VGIAEKADAYPAHLSGG 156 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHH---H--HHHHHHH--hCchhhhhcCccccCch
Confidence 2 23468889999999999975 9999984221 111211111 1 1222332 34444444555789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecCh
Q 001580 807 QRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 884 (1050)
Q Consensus 807 q~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 884 (1050)
|+||++|||||.-+|+++|+|||||+|||+-.-++.+.++++. .|+|+++|||.|.+..+ +.+|+.+++|.|-|+|+|
T Consensus 157 QQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~P 236 (256)
T COG4598 157 QQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGPP 236 (256)
T ss_pred HHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCCh
Confidence 9999999999999999999999999999999999999998876 58999999999999988 999999999999999999
Q ss_pred hHHhhcCCC
Q 001580 885 EELLSNEGS 893 (1050)
Q Consensus 885 ~el~~~~~~ 893 (1050)
+++..++.+
T Consensus 237 ~qvf~nP~S 245 (256)
T COG4598 237 EQVFGNPQS 245 (256)
T ss_pred HHHhcCCCC
Confidence 999987653
No 387
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=345.42 Aligned_cols=207 Identities=28% Similarity=0.459 Sum_probs=168.7
Q ss_pred cEEEEeEEEEeCCCC--CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE--------------E
Q 001580 41 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------I 104 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------~ 104 (1050)
.|+++|++|.|+... .+++|+||||+|++||+++|+|+||||||||+++|+|+++|++|.+.. .
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 389999999997421 257999999999999999999999999999999999999999886532 1
Q ss_pred eCcEEEEecCC--CCCcccHHHHhccCCC---CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHH
Q 001580 105 RGTVAYVPQVS--WIFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 175 (1050)
Q Consensus 105 ~~~i~~v~Q~~--~l~~~TV~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqR 175 (1050)
+..||||||+| .++..||+||+.|+.. .... ++..+++.+++.. .+..+....+||||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~qr 152 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKRR 152 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHHH
Confidence 23599999998 4678899999998631 2222 2333444444430 012334457899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhh-hcCEEEEEcCCeEeeccChhhh
Q 001580 176 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDL 253 (1050)
Q Consensus 176 v~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 253 (1050)
++|||||+.+|++|||||||++||+.++.++++.+..... .|+|+|+||||++++. .||||++|++|++++.|+.+++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~ 232 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREV 232 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999998877654 4899999999999986 5899999999999999999887
Q ss_pred hcC
Q 001580 254 SNN 256 (1050)
Q Consensus 254 ~~~ 256 (1050)
.+.
T Consensus 233 ~~~ 235 (287)
T PRK13637 233 FKE 235 (287)
T ss_pred HhC
Confidence 654
No 388
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.1e-37 Score=333.32 Aligned_cols=192 Identities=24% Similarity=0.412 Sum_probs=157.9
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------Ee
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IR 105 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~~ 105 (1050)
+|+++|++++|+.. .+++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+
T Consensus 1 ~l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (216)
T TIGR00960 1 MIRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLR 79 (216)
T ss_pred CeEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHH
Confidence 37899999999632 246999999999999999999999999999999999999998876532 12
Q ss_pred CcEEEEecCCCCC-cccHHHHhccCCC---CC----HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHH
Q 001580 106 GTVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 177 (1050)
Q Consensus 106 ~~i~~v~Q~~~l~-~~TV~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~ 177 (1050)
..++|++|++.++ ..||+||+.++.. .. .+++.+.++..++.+..+. ...+|||||||||+
T Consensus 80 ~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~ 148 (216)
T TIGR00960 80 RHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHA-----------LPMQLSGGEQQRVA 148 (216)
T ss_pred HhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHH
Confidence 3599999999887 5799999987521 11 1233444555555443332 33589999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeE
Q 001580 178 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMV 244 (1050)
Q Consensus 178 LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i 244 (1050)
|||||+.+|++|||||||++||+.+++++.+.+.+...+|+|+|+||||++++.. ||++++|++|++
T Consensus 149 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 149 IARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999999887665568999999999999875 799999999874
No 389
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.4e-37 Score=370.71 Aligned_cols=210 Identities=20% Similarity=0.232 Sum_probs=177.9
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|
T Consensus 4 l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~ 81 (490)
T PRK10938 4 LQISQGTFRLSDT--KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSD 81 (490)
T ss_pred EEEEeEEEEcCCe--eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhce
Confidence 8999999999643 59999999999999999999999999999999999999999999999988876666677788999
Q ss_pred EcCCccc--c-------cccHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 746 IPQSPVL--F-------SGTVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 746 v~Q~~~l--f-------~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
+||++.+ + ..|+++|+.... ..++++.++++..+ ++........+||||||||++||||
T Consensus 82 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv~la~a 149 (490)
T PRK10938 82 EWQRNNTDMLSPGEDDTGRTTAEIIQDEV-KDPARCEQLAQQFG-----------ITALLDRRFKYLSTGETRKTLLCQA 149 (490)
T ss_pred eccCcchhhcccchhhccccHHHhcccch-hHHHHHHHHHHHcC-----------CHhhhhCCcccCCHHHHHHHHHHHH
Confidence 9998753 2 348888875421 11233444444444 4334445567899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|||+|||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 150 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 224 (490)
T PRK10938 150 LMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQ 224 (490)
T ss_pred HHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999988643 6899999999999877 99999999999999999998865
No 390
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.9e-37 Score=350.86 Aligned_cols=204 Identities=24% Similarity=0.401 Sum_probs=168.1
Q ss_pred CCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-----------EeC
Q 001580 38 GLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRG 106 (1050)
Q Consensus 38 ~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-----------~~~ 106 (1050)
+...|+++|++++|+ ++.+|+|+||+|++|+++||+||||||||||+++|+|+++|++|.+.. .+.
T Consensus 38 ~~~~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~ 114 (340)
T PRK13536 38 STVAIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARA 114 (340)
T ss_pred CceeEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhc
Confidence 445699999999996 356999999999999999999999999999999999999999886542 134
Q ss_pred cEEEEecCCCCC-cccHHHHhccC-CC--CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFG-SA--FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g-~~--~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
.|||+||++.++ ..||+||+.+. .. .... +....++.+++.+. ......+||||||||++|
T Consensus 115 ~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-----------~~~~~~~LS~G~kqrv~l 183 (340)
T PRK13536 115 RIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADARVSDLSGGMKRRLTL 183 (340)
T ss_pred cEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hCCChhhCCHHHHHHHHH
Confidence 599999999886 78999999752 11 1111 12222333333221 223446899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
||||+++|+++||||||+||||.+++++++.+.+....|+|+|++||+++++.. ||+|++|++|++++.|+++++..
T Consensus 184 A~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 184 ARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred HHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999999999888766579999999999999975 89999999999999999988754
No 391
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.7e-37 Score=353.23 Aligned_cols=202 Identities=26% Similarity=0.395 Sum_probs=170.0
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCC--CCeeE----------EeCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVS--DASAV----------IRGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~--g~~~~----------~~~~i 108 (1050)
.|+++|++++|+. +.+|+|+||++++|++++|+|||||||||||++|+|+.+|++ |.+.. .++.|
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~i 81 (362)
T TIGR03258 5 GIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGL 81 (362)
T ss_pred EEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCE
Confidence 4899999999963 469999999999999999999999999999999999999998 86542 12459
Q ss_pred EEEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHH
Q 001580 109 AYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 180 (1050)
Q Consensus 109 ~~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAr 180 (1050)
|||+|++.+| ..||+|||.|+.. ... .++...++..++.+..+. ...+|||||||||+|||
T Consensus 82 g~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~-----------~~~~LSgGq~QRvaLAR 150 (362)
T TIGR03258 82 ALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAH-----------LPAQLSGGMQQRIAIAR 150 (362)
T ss_pred EEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhC-----------ChhhCCHHHHHHHHHHH
Confidence 9999999987 6799999998632 121 223344555555444433 33689999999999999
Q ss_pred HHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC--CcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 181 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS--GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 181 aL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~--g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
||+.+|++|||||||++||+..+.++.+.+.+..++ |.|+|+||||++++.. +|+|++|++|++++.|+++++..+
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999999988776554 7899999999999765 799999999999999999988654
No 392
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3e-37 Score=350.97 Aligned_cols=202 Identities=31% Similarity=0.455 Sum_probs=168.9
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCcEEE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAY 110 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~i~~ 110 (1050)
.|+++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|+|+++|++|.+.. .++.|||
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~ 78 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGF 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEE
Confidence 3789999999963 56999999999999999999999999999999999999999886543 1245999
Q ss_pred EecCCCCC-cccHHHHhccCCCC-------CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 111 VPQVSWIF-NATVRDNILFGSAF-------EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 111 v~Q~~~l~-~~TV~eni~~g~~~-------~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
|+|++.+| ..||+||+.|+... .. ++....++..++.+..+ ....+|||||||||+|
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LSgGq~QRval 147 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLAD-----------RYPAQLSGGQKQRVAL 147 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHHH
Confidence 99999987 57999999987421 11 12333444455543333 3346899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
||||+.+|++|||||||++||+.+++.+.+.+.+..++ |.|+|+||||++++.. ||+|++|++|++++.|+++++...
T Consensus 148 ArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 148 ARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999988776544 8999999999999765 799999999999999999887654
No 393
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-37 Score=351.68 Aligned_cols=205 Identities=28% Similarity=0.413 Sum_probs=168.9
Q ss_pred cEEEEeEEEEeCCCC-CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------E
Q 001580 41 AISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------I 104 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~ 104 (1050)
+|+++|++|+|+... ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+.. .
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 378999999997322 357999999999999999999999999999999999999999886532 1
Q ss_pred eCcEEEEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHH
Q 001580 105 RGTVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 176 (1050)
Q Consensus 105 ~~~i~~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv 176 (1050)
+..|||++|++.++ ..||+||+.++.. ... ++....++..++.+.. .....+|||||||||
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGq~qRv 149 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKA-----------DRYPAQLSGGQKQRV 149 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHHH
Confidence 24699999999887 5899999987521 122 1223334444443332 234468999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhh
Q 001580 177 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 177 ~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
+|||||+.+|++|||||||++||+.++..+++.+.+... .|+|+|++||+++++.. ||++++|++|++++.|+.+++.
T Consensus 150 ~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 150 AIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999998877644 48999999999999876 8999999999999999998886
Q ss_pred cC
Q 001580 255 NN 256 (1050)
Q Consensus 255 ~~ 256 (1050)
..
T Consensus 230 ~~ 231 (343)
T PRK11153 230 SH 231 (343)
T ss_pred hC
Confidence 54
No 394
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-37 Score=299.41 Aligned_cols=205 Identities=27% Similarity=0.363 Sum_probs=172.1
Q ss_pred cEEEEEEEEEeCC--CCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHH---H
Q 001580 665 SIKFEDVVLRYRP--ELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD---L 739 (1050)
Q Consensus 665 ~i~~~~v~~~y~~--~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~---~ 739 (1050)
.|++++++++.+. ....+|++|+|.|.+||.+|||||||||||||+-+++|+-+|++|+|++.|+++.+++.+. +
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 4888888888753 2346999999999999999999999999999999999999999999999999999988654 3
Q ss_pred -hhheEEEcCCccccc-ccHHHhcccC----CC-CCH--HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHH
Q 001580 740 -RKILGIIPQSPVLFS-GTVRFNLDPF----SE-HSD--ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQL 810 (1050)
Q Consensus 740 -r~~i~~v~Q~~~lf~-~tv~~nl~~~----~~-~~~--~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qr 810 (1050)
.+++|+|+|...|.. .|-.||...- .+ ..+ ....+.++++ |+...+...+.+|||||+||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~v-----------GLg~Rl~HyP~qLSGGEQQR 154 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSRAGAKALLEAV-----------GLGKRLTHYPAQLSGGEQQR 154 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccHHHHHHHHHHHh-----------CcccccccCccccCchHHHH
Confidence 456999999998774 5999998632 11 111 2233344444 44445555567899999999
Q ss_pred HHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhhcCEEEEEeCCEEEE
Q 001580 811 LSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIIDCDRILLLDSGRVLE 880 (1050)
Q Consensus 811 l~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~ 880 (1050)
|+||||+...|+||+-||||-+||.+|-..|.+.+..+. .|.|.++||||.....+|||++-|.+|++++
T Consensus 155 VAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~ 226 (228)
T COG4181 155 VALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVE 226 (228)
T ss_pred HHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceecc
Confidence 999999999999999999999999999999999998754 4789999999999999999999999999975
No 395
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-37 Score=330.72 Aligned_cols=193 Identities=29% Similarity=0.432 Sum_probs=158.7
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCcEEEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAYV 111 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~i~~v 111 (1050)
++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..++|+
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEE
Confidence 478999999963 57999999999999999999999999999999999999999886532 12359999
Q ss_pred ecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 001580 112 PQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVY 183 (1050)
Q Consensus 112 ~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~ 183 (1050)
||++.++ ..||+||+.++.. ... +++...++..++.+..+ ....+|||||||||+|||||+
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~al~ 146 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLN-----------RYPHELSGGQQQRVALARALA 146 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHHHHHHHh
Confidence 9999876 6799999987522 111 12333444444443333 334689999999999999999
Q ss_pred cCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeecc
Q 001580 184 SNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 248 (1050)
Q Consensus 184 ~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g 248 (1050)
.+|+++||||||++||+.++.++++.+.+... .|+|+|++||+++++.. ||++++|++|++++.|
T Consensus 147 ~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 147 REPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998876544 48999999999999865 7999999999987654
No 396
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-37 Score=354.14 Aligned_cols=202 Identities=29% Similarity=0.403 Sum_probs=169.0
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCcEEE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAY 110 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~i~~ 110 (1050)
.|+++|++++|+. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|.+.. .+..|||
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEE
Confidence 4899999999963 56999999999999999999999999999999999999999886542 1235999
Q ss_pred EecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 001580 111 VPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 182 (1050)
Q Consensus 111 v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL 182 (1050)
|+|++.+| ..||+||+.|+.. ... +++...++..++.+..+. ...+|||||||||+|||||
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~-----------~~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDR-----------KPKALSGGQRQRVAIGRTL 148 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcC-----------ChhhCCHHHHHHHHHHHHH
Confidence 99999887 5799999998632 111 233444555555443333 3368999999999999999
Q ss_pred ccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 183 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 183 ~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
+.+|++|||||||++||+.+++.+.+.+.+... .|.|+|+||||++++.. ||+|++|++|++++.|+++++...
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999998876644 48999999999998865 799999999999999999887644
No 397
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3e-37 Score=325.76 Aligned_cols=193 Identities=23% Similarity=0.317 Sum_probs=161.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....++++++|
T Consensus 2 l~~~~l~~~~~~~--~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHDQ--PLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCCe--eEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 7899999999643 69999999999999999999999999999999999999999999999998865 34567889999
Q ss_pred EcCCccccc-ccHHHhcccCCC--CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCC
Q 001580 746 IPQSPVLFS-GTVRFNLDPFSE--HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSK 822 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~~--~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~ 822 (1050)
+||++.++. .|+++|+.+... ..+..+ .+.++.+ ++.........+||||||||++||||++++|+
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~---------~~~l~~~--~l~~~~~~~~~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGI---------TELCRLF--SLEHLIDYPCGLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHH---------HHHHHHc--CCchhhhCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999998874 699999875321 111223 3344433 22233344456799999999999999999999
Q ss_pred EEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhhcCEEEE
Q 001580 823 ILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILL 872 (1050)
Q Consensus 823 illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~v 872 (1050)
+|||||||++||+.+.+.+.+.|+++. .++|+|++||+.+.+..||.-.+
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 999999999999999999999999863 57899999999999998987653
No 398
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-37 Score=333.91 Aligned_cols=201 Identities=30% Similarity=0.446 Sum_probs=165.5
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCcEEE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAY 110 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~i~~ 110 (1050)
.|+++|++|.|+. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|.+.. .+..++|
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~ 78 (239)
T cd03296 2 SIEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGF 78 (239)
T ss_pred EEEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEE
Confidence 3789999999963 57999999999999999999999999999999999999998876532 1235999
Q ss_pred EecCCCCC-cccHHHHhccCCCC-------CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 111 VPQVSWIF-NATVRDNILFGSAF-------EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 111 v~Q~~~l~-~~TV~eni~~g~~~-------~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
++|+|.++ ..||+||+.++... +. ++....++..++.+.. .....+|||||||||+|
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~l 147 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLA-----------DRYPAQLSGGQRQRVAL 147 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHHH
Confidence 99999887 57999999876321 11 1122334444443322 23446899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
||||+.+|+++||||||++||+.+++.+++.+.+... .|+|+|++||+++++.. ||++++|++|++++.|+++++..
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 148 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 9999999999999999999999999999998876654 38999999999998765 79999999999999998887653
No 399
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.2e-37 Score=353.05 Aligned_cols=204 Identities=30% Similarity=0.478 Sum_probs=171.6
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCc
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 107 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~ 107 (1050)
+.|+++|+++.|+ ++++|+|+||++++||+++|+||||||||||+|+|+|+++|++|.+.. .++.
T Consensus 2 ~~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ 78 (402)
T PRK09536 2 PMIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRR 78 (402)
T ss_pred ceEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcc
Confidence 3689999999996 357999999999999999999999999999999999999999886542 1235
Q ss_pred EEEEecCCCC-CcccHHHHhccCCC-----C---C---HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHH
Q 001580 108 VAYVPQVSWI-FNATVRDNILFGSA-----F---E---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 175 (1050)
Q Consensus 108 i~~v~Q~~~l-~~~TV~eni~~g~~-----~---~---~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqR 175 (1050)
+|||+|++.+ ++.||+||+.++.. + . .++...+++..++.+..+ ....+||||||||
T Consensus 79 ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~-----------~~~~~LSgGerQR 147 (402)
T PRK09536 79 VASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFAD-----------RPVTSLSGGERQR 147 (402)
T ss_pred eEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHH
Confidence 9999999987 58999999988642 1 1 123344455555544332 2346899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhh
Q 001580 176 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 176 v~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
|+|||||+++|++|||||||++||+.++..+++.+.+..++|+|+|++|||++.+.. |||+++|++|++++.|+++++.
T Consensus 148 v~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 148 VLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999887766568999999999999965 8999999999999999999887
Q ss_pred cCh
Q 001580 255 NNG 257 (1050)
Q Consensus 255 ~~~ 257 (1050)
..+
T Consensus 228 ~~~ 230 (402)
T PRK09536 228 TAD 230 (402)
T ss_pred CcH
Confidence 653
No 400
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-37 Score=341.23 Aligned_cols=200 Identities=29% Similarity=0.452 Sum_probs=167.8
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i 108 (1050)
.|+++|++|.|+. .+++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+.. .+..|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 5899999999962 246999999999999999999999999999999999999999886532 12359
Q ss_pred EEEecCC--CCCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHH
Q 001580 109 AYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 179 (1050)
Q Consensus 109 ~~v~Q~~--~l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LA 179 (1050)
||++|+| .++..||+||+.|+.. ... +++...++..++....+..+ .+|||||||||+||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 4678899999998632 121 23344555666654444333 58999999999999
Q ss_pred HHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhh-hcCEEEEEcCCeEeeccChhhh
Q 001580 180 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDL 253 (1050)
Q Consensus 180 raL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 253 (1050)
|||+.+|++|||||||++||+.++.++++.+.+...+|.|+|++||+++++. .||||++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999999999988776556899999999999985 5899999999999999988654
No 401
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-37 Score=342.20 Aligned_cols=207 Identities=30% Similarity=0.521 Sum_probs=169.1
Q ss_pred EEEEeEEEEeCCCC--CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----E-----------
Q 001580 42 ISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----I----------- 104 (1050)
Q Consensus 42 i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----~----------- 104 (1050)
++++|++|+|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.+.. +
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996321 247999999999999999999999999999999999999999876532 1
Q ss_pred -eCcEEEEecCC--CCCcccHHHHhccCCC---CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHH
Q 001580 105 -RGTVAYVPQVS--WIFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 174 (1050)
Q Consensus 105 -~~~i~~v~Q~~--~l~~~TV~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrq 174 (1050)
+..||||+|+| .+++.||+||+.|+.. .... ++..+++.+++...+ ......+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL----------LARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh----------hhCCcccCCHHHHH
Confidence 13599999997 5677899999988632 1221 233444555553221 12344689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 175 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 175 Rv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
||+|||||+.+|+++||||||++||+.++.++++.+..... .|.|+|++|||++++.. ||||++|++|+++++|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999998876644 48999999999999865 89999999999999999988
Q ss_pred hhcChH
Q 001580 253 LSNNGE 258 (1050)
Q Consensus 253 l~~~~~ 258 (1050)
+.+...
T Consensus 233 ~~~~~~ 238 (290)
T PRK13634 233 IFADPD 238 (290)
T ss_pred HhcCHH
Confidence 765543
No 402
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.5e-37 Score=335.30 Aligned_cols=200 Identities=22% Similarity=0.374 Sum_probs=163.2
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeCcE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGTV 108 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~~i 108 (1050)
++++|++|+|+. +++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999962 46999999999999999999999999999999999999999886532 12359
Q ss_pred EEEecCCCCC-cccHHHHhccCCCCC-------------HH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCH
Q 001580 109 AYVPQVSWIF-NATVRDNILFGSAFE-------------PA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 170 (1050)
Q Consensus 109 ~~v~Q~~~l~-~~TV~eni~~g~~~~-------------~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSG 170 (1050)
+|+||++.++ ..||+||+.++.... .. +....++..++. ...+....+|||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSg 146 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-----------DLADRPAGELSY 146 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-----------chhhCChhhCCH
Confidence 9999999887 469999998753210 11 111222222221 123455678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccC
Q 001580 171 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGT 249 (1050)
Q Consensus 171 GqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~ 249 (1050)
||||||+|||||+.+|+++||||||++||+.+++++++.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+
T Consensus 147 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (236)
T cd03219 147 GQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGT 226 (236)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecC
Confidence 99999999999999999999999999999999999999887765578999999999999876 79999999999999998
Q ss_pred hhhhhc
Q 001580 250 FEDLSN 255 (1050)
Q Consensus 250 ~~~l~~ 255 (1050)
++++..
T Consensus 227 ~~~~~~ 232 (236)
T cd03219 227 PDEVRN 232 (236)
T ss_pred HHHhcc
Confidence 877653
No 403
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-37 Score=341.64 Aligned_cols=207 Identities=24% Similarity=0.440 Sum_probs=167.8
Q ss_pred cEEEEeEEEEeCCCC--CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------
Q 001580 41 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 103 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------- 103 (1050)
.|+++|++|+|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|+.|.+..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 388999999996322 247999999999999999999999999999999999999999885432
Q ss_pred -EeCcEEEEecCC--CCCcccHHHHhccCCC---CCHHH----HHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHH
Q 001580 104 -IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEPAR----YEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 173 (1050)
Q Consensus 104 -~~~~i~~v~Q~~--~l~~~TV~eni~~g~~---~~~~~----~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqr 173 (1050)
.+..||||||+| .++..||.||+.|+.. ..... ....++.+++... ..+....+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~ 151 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRD----------VMSQSPFQMSGGQM 151 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHH
Confidence 123599999997 5677899999998631 12222 2223333333211 12344578999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChh
Q 001580 174 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFE 251 (1050)
Q Consensus 174 qRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 251 (1050)
|||+|||||+.+|+++||||||++||+.+++++.+.+.+... .|.|+|+|||+++++.. ||||++|++|++++.|+++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~ 231 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPK 231 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999998877654 58999999999999864 7999999999999999998
Q ss_pred hhhcCh
Q 001580 252 DLSNNG 257 (1050)
Q Consensus 252 ~l~~~~ 257 (1050)
++....
T Consensus 232 ~~~~~~ 237 (286)
T PRK13646 232 ELFKDK 237 (286)
T ss_pred HHHhCH
Confidence 876553
No 404
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.8e-37 Score=327.66 Aligned_cols=195 Identities=24% Similarity=0.344 Sum_probs=163.4
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheE
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILG 744 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~ 744 (1050)
.++++|++++|++. ++++++||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNEE--PVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCCc--eeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 48999999999643 699999999999999999999999999999999999999999999999988642 3456799
Q ss_pred EEcCCcccccc-cHHHhcccCCC---C-CHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 745 IIPQSPVLFSG-TVRFNLDPFSE---H-SDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 745 ~v~Q~~~lf~~-tv~~nl~~~~~---~-~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
|++|++.++.. |+++|+.+... . .++.+.+.++.. |+..........||||||||++||||+++
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~laral~~ 154 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIV-----------GLAGYEDTLVRQLSAGQKKRLALARLWLS 154 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHc-----------CChhhccCChhhCCHHHHHHHHHHHHHhc
Confidence 99999988876 99999864211 1 112223333333 33333455557899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeC
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDS 875 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~ 875 (1050)
+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 155 PAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999999999998754 47899999999999977 999999864
No 405
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-37 Score=369.31 Aligned_cols=212 Identities=22% Similarity=0.358 Sum_probs=177.2
Q ss_pred EEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH-HHhhheEEE
Q 001580 668 FEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM-DLRKILGII 746 (1050)
Q Consensus 668 ~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~-~~r~~i~~v 746 (1050)
++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++.++|+
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999964 3699999999999999999999999999999999999999999999999998765543 356789999
Q ss_pred cCCcccccc-cHHHhcccCCC------CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHcc
Q 001580 747 PQSPVLFSG-TVRFNLDPFSE------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLR 819 (1050)
Q Consensus 747 ~Q~~~lf~~-tv~~nl~~~~~------~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~ 819 (1050)
||++.++.. |+++|+.+... ....+.. ..+.++++.+ |++........+|||||||||+|||||+.
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMY-----RDTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHHh
Confidence 999987754 99999975321 0111111 1233444443 55555566677899999999999999999
Q ss_pred CCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 001580 820 RSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELL 888 (1050)
Q Consensus 820 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~ 888 (1050)
+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++++.. ||+|++|++|++++.|+++++.
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 999999999999999999999999998864 47899999999999876 9999999999999999988763
No 406
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-37 Score=333.60 Aligned_cols=199 Identities=28% Similarity=0.359 Sum_probs=165.8
Q ss_pred CCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------EeCcEEEE
Q 001580 39 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------IRGTVAYV 111 (1050)
Q Consensus 39 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------~~~~i~~v 111 (1050)
.+.|+++|++++|+. +++|+++||+|++|++++|+|+||||||||+++|+|+++|++|.+.. .+..++|+
T Consensus 10 ~~~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v 86 (257)
T PRK11247 10 GTPLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLM 86 (257)
T ss_pred CCcEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEE
Confidence 456999999999963 57999999999999999999999999999999999999999887642 13359999
Q ss_pred ecCCCCCc-ccHHHHhccCCCC-CHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEE
Q 001580 112 PQVSWIFN-ATVRDNILFGSAF-EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVF 189 (1050)
Q Consensus 112 ~Q~~~l~~-~TV~eni~~g~~~-~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vl 189 (1050)
+|++.++. .||+||+.++... ...+....++..++.+.. .....+|||||||||+|||||+.+|+++
T Consensus 87 ~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGqkqrl~laraL~~~p~ll 155 (257)
T PRK11247 87 FQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRA-----------NEWPAALSGGQKQRVALARALIHRPGLL 155 (257)
T ss_pred ecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99998874 7999999876321 123344455555554433 2344689999999999999999999999
Q ss_pred EEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChh
Q 001580 190 IFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFE 251 (1050)
Q Consensus 190 lLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 251 (1050)
||||||++||+.++..+.+.+.+... .|+|+|+||||++++.. ||+|++|++|+++++++.+
T Consensus 156 lLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 156 LLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999998876533 58999999999999865 7999999999999877654
No 407
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-37 Score=337.87 Aligned_cols=208 Identities=30% Similarity=0.453 Sum_probs=172.9
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCc
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 107 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~ 107 (1050)
+.++++|++|.|+.. .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|.+.. .+..
T Consensus 4 ~~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13635 4 EIIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQ 82 (279)
T ss_pred ceEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhh
Confidence 368999999999632 357999999999999999999999999999999999999999886532 1235
Q ss_pred EEEEecCCC--CCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 108 VAYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 108 i~~v~Q~~~--l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
|||++|++. ++..||.||+.++.. ... ++....++..++...++..+ .+|||||||||+|
T Consensus 83 i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~l 151 (279)
T PRK13635 83 VGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAI 151 (279)
T ss_pred eEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHH
Confidence 999999983 567899999987521 121 23444556666665544433 5899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcCh
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 257 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 257 (1050)
||||+.+|+++||||||++||+.+++++++.+.+...+ |.|+|++||+++++..||+|++|++|++++.|+.+++....
T Consensus 152 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13635 152 AGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKSG 231 (279)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcCH
Confidence 99999999999999999999999999999988776544 89999999999998889999999999999999988876654
Q ss_pred HH
Q 001580 258 EL 259 (1050)
Q Consensus 258 ~~ 259 (1050)
..
T Consensus 232 ~~ 233 (279)
T PRK13635 232 HM 233 (279)
T ss_pred HH
Confidence 43
No 408
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.8e-37 Score=344.63 Aligned_cols=202 Identities=25% Similarity=0.395 Sum_probs=166.5
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-----------EeCcE
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTV 108 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-----------~~~~i 108 (1050)
..|+++|++++|+. +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|.+.. .+..+
T Consensus 3 ~~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 3 VAIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAI 79 (303)
T ss_pred cEEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcE
Confidence 35899999999963 56999999999999999999999999999999999999999886543 13459
Q ss_pred EEEecCCCCC-cccHHHHhccC-C--CCCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHH
Q 001580 109 AYVPQVSWIF-NATVRDNILFG-S--AFEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 180 (1050)
Q Consensus 109 ~~v~Q~~~l~-~~TV~eni~~g-~--~~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAr 180 (1050)
||+||++.++ ..||+||+.+. . ..+.. +....++..++.+.. .....+|||||||||+|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-----------DVRVALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHh-----------cCchhhCCHHHHHHHHHHH
Confidence 9999999886 68999999742 1 11211 122233333433222 2334689999999999999
Q ss_pred HHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 181 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 181 aL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
||+.+|+++||||||++||+.+++++++.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+++++..
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999887765568999999999999875 89999999999999999887653
No 409
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-37 Score=313.84 Aligned_cols=213 Identities=26% Similarity=0.448 Sum_probs=176.0
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRG 106 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~ 106 (1050)
++++++|++..|.. -++|++|||++++||+++|+|+||+||||||++|+|..++.+|.+.. .+.
T Consensus 2 ~mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~ 78 (237)
T COG0410 2 PMLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARL 78 (237)
T ss_pred CceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhC
Confidence 46899999999973 57999999999999999999999999999999999999998876643 233
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN 185 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~ 185 (1050)
.|+||||.-.+| ..||+||+..|......+ ......+.+.++.+|.-. ...+.++.+|||||||.++|||||..+
T Consensus 79 Gi~~VPegR~iF~~LTVeENL~~g~~~~~~~---~~~~~~~e~v~~lFP~Lk-er~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 79 GIAYVPEGRRIFPRLTVEENLLLGAYARRDK---EAQERDLEEVYELFPRLK-ERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred CeEeCcccccchhhCcHHHHHhhhhhccccc---ccccccHHHHHHHChhHH-HHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 599999998887 789999999884332210 001111334455555322 234667889999999999999999999
Q ss_pred CCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhh-hcCEEEEEcCCeEeeccChhhhhcChHH
Q 001580 186 SDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNNGEL 259 (1050)
Q Consensus 186 ~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 259 (1050)
|++|+|||||.||-|...+.|++.+.+..++ |.||++|.++..++- .+||.++|++|+|+.+|+.+++..++..
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~v 230 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPDV 230 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHHH
Confidence 9999999999999999999999998887754 779999999999865 4799999999999999999999887654
No 410
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-37 Score=351.07 Aligned_cols=205 Identities=25% Similarity=0.394 Sum_probs=169.7
Q ss_pred CCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCc
Q 001580 38 GLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGT 107 (1050)
Q Consensus 38 ~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~ 107 (1050)
..+.|+++|++++|+. +++|+|+||++++|++++|+|||||||||||++|+|+.+|++|.+.. .++.
T Consensus 16 ~~~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ 92 (377)
T PRK11607 16 LTPLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRP 92 (377)
T ss_pred CCceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCC
Confidence 3456999999999963 46999999999999999999999999999999999999999876532 1235
Q ss_pred EEEEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHH
Q 001580 108 VAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 179 (1050)
Q Consensus 108 i~~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LA 179 (1050)
||||+|++.+| ..||.|||.|+.. ... ++....++..++.+..+ ....+|||||||||+||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~-----------~~~~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAK-----------RKPHQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHH
Confidence 99999999988 5799999998732 111 12333444445543333 23468999999999999
Q ss_pred HHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 180 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 180 raL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
|||+.+|++|||||||++||+..++++.+.+.+..+ .|.|+|+||||++++.. +|+|++|++|++++.|+++++..+
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 999999999999999999999999999887766543 48999999999999764 899999999999999999887654
No 411
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=5.6e-37 Score=330.58 Aligned_cols=198 Identities=27% Similarity=0.413 Sum_probs=161.7
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCC-----CCCCCCeeE-------------
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGEL-----PPVSDASAV------------- 103 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~-----~~~~g~~~~------------- 103 (1050)
|+++|++|+|+. +++|+|+||++++|++++|+|+||||||||+++|+|++ +|++|.+..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999963 47999999999999999999999999999999999999 888876432
Q ss_pred -EeCcEEEEecCCCCCcccHHHHhccCCCC----C----HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHH
Q 001580 104 -IRGTVAYVPQVSWIFNATVRDNILFGSAF----E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 174 (1050)
Q Consensus 104 -~~~~i~~v~Q~~~l~~~TV~eni~~g~~~----~----~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrq 174 (1050)
.+..++|++|++.++..||+||+.++... . .++....++..++.+..+..+. +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 12359999999988888999999875321 1 1223334444454433222110 3689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 175 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 175 Rv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
||+|||||+.+|+++||||||++||+.+++++++.+.+...+ +|+|++|||++++.. ||++++|++|++++.|++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 999999999999999999999999999999999988776555 899999999999865 89999999999999887654
No 412
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.7e-37 Score=340.15 Aligned_cols=202 Identities=29% Similarity=0.505 Sum_probs=172.1
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-----------eCcE
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-----------RGTV 108 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-----------~~~i 108 (1050)
..++++|+++.|+. ++.+|+||||++++|+++||+||||||||||+|+|+|++.|++|.+... +.+|
T Consensus 3 ~~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~i 80 (293)
T COG1131 3 EVIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRI 80 (293)
T ss_pred ceeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhhe
Confidence 35789999999962 3579999999999999999999999999999999999999998876442 2359
Q ss_pred EEEecCCCCC-cccHHHHhccCC-----C--CCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHH
Q 001580 109 AYVPQVSWIF-NATVRDNILFGS-----A--FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 180 (1050)
Q Consensus 109 ~~v~Q~~~l~-~~TV~eni~~g~-----~--~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAr 180 (1050)
||+||+|.++ ..||+||+.|.. . .+.+++++.++..+|.+.. +....+||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHH
Confidence 9999999886 789999998742 1 1234556666666665522 2234689999999999999
Q ss_pred HHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCC-cEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhh
Q 001580 181 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSG-KTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 181 aL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g-~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
||+++|++|||||||+||||.++..+++.+.+...+| +||+++||.++.+.. ||+|++|++|+++++|+.+++.
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~ 225 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELK 225 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHH
Confidence 9999999999999999999999999999988887776 799999999999987 8999999999999999887754
No 413
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-37 Score=329.59 Aligned_cols=197 Identities=23% Similarity=0.359 Sum_probs=162.9
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-----------EeCcEEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVAY 110 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-----------~~~~i~~ 110 (1050)
|+++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..++|
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEE
Confidence 578999999963 57999999999999999999999999999999999999999876532 1235999
Q ss_pred EecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 001580 111 VPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 182 (1050)
Q Consensus 111 v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL 182 (1050)
++|++.++ ..||+||+.++.. ... ++....++..++....+. ...+||||||||++|||||
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADR-----------LVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------ChhhCCHHHHHHHHHHHHH
Confidence 99999876 5799999976421 111 233444555555543332 2358999999999999999
Q ss_pred ccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 183 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 183 ~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
+.+|+++||||||++||+.+++.+++.+.+...+ |+|+|++||+++++.. +|++++|++|++++.|++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 218 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEE 218 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHH
Confidence 9999999999999999999999999988776554 8999999999999876 79999999999998887655
No 414
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.4e-38 Score=312.95 Aligned_cols=212 Identities=24% Similarity=0.404 Sum_probs=172.0
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRG 106 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~ 106 (1050)
..+.++|+.++|. +++++++|||++++||+|++.||||+||||.+.++.|+.+|++|.+.. .+-
T Consensus 3 ~~L~a~~l~K~y~---kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArl 79 (243)
T COG1137 3 STLVAENLAKSYK---KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARL 79 (243)
T ss_pred cEEEehhhhHhhC---CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhc
Confidence 4578999999996 468999999999999999999999999999999999999999987643 123
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCCCC---HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSAFE---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 182 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~~~---~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL 182 (1050)
.|||+||+|.+| ..||+|||..-.+.. ....++..+...|.+.+..-. .....+.+||||+|+|+.|||||
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~h-----lr~~~a~sLSGGERRR~EIARaL 154 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITH-----LRDSKAYSLSGGERRRVEIARAL 154 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHH-----HhcCcccccccchHHHHHHHHHH
Confidence 499999999999 789999997543221 111112222223333332211 12345679999999999999999
Q ss_pred ccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcc-hhhhcCEEEEEcCCeEeeccChhhhhcChHH
Q 001580 183 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLH-FLSQVDRIILVHEGMVKEEGTFEDLSNNGEL 259 (1050)
Q Consensus 183 ~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~-~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 259 (1050)
+.+|+.++|||||+|+||.+...|.+.+..+..+|..++++.|+.. .++-|||.+++.+|++..+|+++++.+++..
T Consensus 155 a~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n~~V 232 (243)
T COG1137 155 AANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNNEDV 232 (243)
T ss_pred hcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcChhh
Confidence 9999999999999999999999998877667778999999999975 5788999999999999999999999887654
No 415
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-37 Score=328.84 Aligned_cols=198 Identities=29% Similarity=0.411 Sum_probs=161.4
Q ss_pred EEEEeEEEEeCCCC-CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------EeCcEEEEec
Q 001580 42 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------IRGTVAYVPQ 113 (1050)
Q Consensus 42 i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------~~~~i~~v~Q 113 (1050)
|+++|++++|+... .+++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+.. .+..++||+|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 47899999996311 157999999999999999999999999999999999999999886543 1346999999
Q ss_pred CCCCCc-ccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 001580 114 VSWIFN-ATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN 185 (1050)
Q Consensus 114 ~~~l~~-~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~ 185 (1050)
++.++. .||+||+.++.. ... ++....++..++.+..+. ...+||||||||++|||||+.+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrl~la~al~~~ 149 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENA-----------YPHQLSGGMRQRVALARALAVD 149 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------CcccCCHHHHHHHHHHHHHHcC
Confidence 998874 799999986521 111 223344555555443332 3358999999999999999999
Q ss_pred CCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEc--CCeEeeccCh
Q 001580 186 SDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVH--EGMVKEEGTF 250 (1050)
Q Consensus 186 ~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~--~G~i~~~g~~ 250 (1050)
|+++||||||++||+.+++.+++.+.+... .|+|+|++||+++++.. ||++++|+ +|++++.++.
T Consensus 150 p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 150 PDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999998876543 48999999999998765 79999999 7999887654
No 416
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-37 Score=330.74 Aligned_cols=199 Identities=24% Similarity=0.385 Sum_probs=162.3
Q ss_pred CcEEEEeEEEEeCCCC-CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE--------------
Q 001580 40 PAISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------- 104 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------- 104 (1050)
+.++++|++|.|+... .+++|+++||+|++|++++|+|+||||||||+++|+|+++|++|.+..-
T Consensus 4 ~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~ 83 (233)
T PRK11629 4 ILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAE 83 (233)
T ss_pred ceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHH
Confidence 4689999999997422 2579999999999999999999999999999999999999998865321
Q ss_pred --eCcEEEEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHH
Q 001580 105 --RGTVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 174 (1050)
Q Consensus 105 --~~~i~~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrq 174 (1050)
+..|+|++|++.++ ..||+||+.++.. ... ++....++..++.+. ......+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~q 152 (233)
T PRK11629 84 LRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGERQ 152 (233)
T ss_pred HHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHH
Confidence 13599999999877 5699999986421 111 123334444444332 23344689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhhcCEEEEEcCCeEeeccC
Q 001580 175 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGT 249 (1050)
Q Consensus 175 Rv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 249 (1050)
|++|||||+.+|++|||||||++||+.+++++.+.+.+... +|+|+|++||+++++..+|++++|++|++++.++
T Consensus 153 rl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 153 RVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999998876543 5899999999999998889999999999987664
No 417
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6.3e-37 Score=333.72 Aligned_cols=199 Identities=29% Similarity=0.440 Sum_probs=163.5
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------EeC
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IRG 106 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~~~ 106 (1050)
|+++|++++|+. ++++|+|+||++++|++++|+||||||||||+++|+|.++|++|.+.. .+.
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 789999999961 357999999999999999999999999999999999999999876532 123
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCCC------------CH---HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSAF------------EP---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 170 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~~------------~~---~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSG 170 (1050)
.++|++|++.++ ..||+||+.++... .. ++....++..++.+.+ .....+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKA-----------YQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCH
Confidence 499999999876 57999999875311 11 1222333444443322 334568999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeecc
Q 001580 171 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 248 (1050)
Q Consensus 171 GqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g 248 (1050)
||||||+|||||+.+|+++||||||++||+.+++++.+.+.+... .|+|+|++||+++++.. ||++++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999999999998876644 48999999999999865 8999999999999999
Q ss_pred Chhhh
Q 001580 249 TFEDL 253 (1050)
Q Consensus 249 ~~~~l 253 (1050)
+++++
T Consensus 229 ~~~~~ 233 (243)
T TIGR02315 229 APSEL 233 (243)
T ss_pred CHHHh
Confidence 88775
No 418
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=336.91 Aligned_cols=203 Identities=32% Similarity=0.466 Sum_probs=168.1
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeCc
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 107 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~~ 107 (1050)
+++++|++|+|+. ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+.. .+..
T Consensus 1 ml~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (274)
T PRK13644 1 MIRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKL 78 (274)
T ss_pred CEEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhh
Confidence 3789999999962 346999999999999999999999999999999999999999886532 1234
Q ss_pred EEEEecCCC--CCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 108 VAYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 108 i~~v~Q~~~--l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
+||++|+|. ++..||.||+.++.. ... +++...++..++.+..+ .....||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~l 147 (274)
T PRK13644 79 VGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRH-----------RSPKTLSGGQGQCVAL 147 (274)
T ss_pred eEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhc-----------CCcccCCHHHHHHHHH
Confidence 999999985 457899999987632 121 22333445555544333 3346899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcC
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
||||+.+|+++||||||++||+.++..+++.+.+...+|.|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 148 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 148 AGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999887665568999999999999988999999999999999998887654
No 419
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.7e-37 Score=329.10 Aligned_cols=192 Identities=28% Similarity=0.426 Sum_probs=156.5
Q ss_pred EEEEeEEEEeCCCC-CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------------E
Q 001580 42 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------I 104 (1050)
Q Consensus 42 i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------------~ 104 (1050)
|+++|++++|+... .+++|+++||++++|++++|+||||||||||+++|+|+++|++|.+.. .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996321 157999999999999999999999999999999999999999876532 1
Q ss_pred eCcEEEEecCCCCCc-ccHHHHhccCCCC---CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHH
Q 001580 105 RGTVAYVPQVSWIFN-ATVRDNILFGSAF---EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 176 (1050)
Q Consensus 105 ~~~i~~v~Q~~~l~~-~TV~eni~~g~~~---~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv 176 (1050)
+..++|++|++.++. .||+||+.++... .. +++.+.++..++.... .....+|||||||||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRL-----------NHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhh-----------hcChhhcCHHHHHHH
Confidence 235999999998874 6999999875321 11 1233344444443322 334468999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhhcCEEEEEcCCeE
Q 001580 177 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMV 244 (1050)
Q Consensus 177 ~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~~d~i~~l~~G~i 244 (1050)
+|||||+.+|+++||||||++||+.+++++++.+.+... .|+|+|+|||+++++..||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999998877654 58999999999999887899999999863
No 420
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.7e-37 Score=324.60 Aligned_cols=189 Identities=30% Similarity=0.461 Sum_probs=157.6
Q ss_pred EEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------EeCcEEEEecC
Q 001580 44 IRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------IRGTVAYVPQV 114 (1050)
Q Consensus 44 ~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------~~~~i~~v~Q~ 114 (1050)
++|++++|+.. +++|+++||++++|++++|+||||||||||+++|+|+++|++|.+.. .+..++|++|+
T Consensus 2 ~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~ 79 (205)
T cd03226 2 IENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQD 79 (205)
T ss_pred cccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecC
Confidence 68999999631 57999999999999999999999999999999999999999886542 12359999999
Q ss_pred CC--CCcccHHHHhccCCCC---CHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEE
Q 001580 115 SW--IFNATVRDNILFGSAF---EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVF 189 (1050)
Q Consensus 115 ~~--l~~~TV~eni~~g~~~---~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vl 189 (1050)
+. ++..||+||+.++... ...+..+.++..++.+..+. ...+||||||||++|||||+.+|+++
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~laral~~~p~ll 148 (205)
T cd03226 80 VDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKER-----------HPLSLSGGQKQRLAIAAALLSGKDLL 148 (205)
T ss_pred hhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCC-----------CchhCCHHHHHHHHHHHHHHhCCCEE
Confidence 73 5678999999875321 12344555666666544333 33589999999999999999999999
Q ss_pred EEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEe
Q 001580 190 IFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVK 245 (1050)
Q Consensus 190 lLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~ 245 (1050)
||||||++||+.+++.+.+.+.....+|+|+|++||+++++.. ||++++|++|+++
T Consensus 149 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 149 IFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999887765568999999999999875 7999999999864
No 421
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-37 Score=366.85 Aligned_cols=211 Identities=26% Similarity=0.368 Sum_probs=175.8
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH-HHhhhe
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM-DLRKIL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~-~~r~~i 743 (1050)
.++++|++++|++. ++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...++. .+|++|
T Consensus 4 ~l~~~~l~~~~~~~--~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPGV--KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECCE--EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 38999999999643 699999999999999999999999999999999999999999999999998755443 457789
Q ss_pred EEEcCCcccccc-cHHHhcccCCC------CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFSE------HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~~------~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
+|+||++.+|.. |+.+|+.+... ....+.. ..+.++++.+ |++........+||||||||++||||
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lara 154 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAKA 154 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHHH
Confidence 999999988875 99999975321 1111111 1233445543 44434455667899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecCh
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 884 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 884 (1050)
|+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++++.. ||+|++|++|+++..++.
T Consensus 155 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 155 LARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred HHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 999999999999999999999999999999864 47899999999999877 999999999999876653
No 422
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=330.20 Aligned_cols=203 Identities=25% Similarity=0.395 Sum_probs=168.2
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i 108 (1050)
.++++|++|+|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 47999999999999999999999999999999999999999886532 12359
Q ss_pred EEEecCCCCCcccHHHHhccCCCCC---HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 001580 109 AYVPQVSWIFNATVRDNILFGSAFE---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN 185 (1050)
Q Consensus 109 ~~v~Q~~~l~~~TV~eni~~g~~~~---~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~ 185 (1050)
+|++|++.++..||+||+.++.... ..+....++..++... .......+||||||||++|||||+.+
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKE----------YATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHH----------HhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 9999999988889999998763221 2233344444444311 11234568999999999999999999
Q ss_pred CCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 186 SDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 186 ~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
|+++||||||++||+.+++++++.+..... .|+|+|++||+++++.. ||+|++|++|++++.|+++++...
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 999999999999999999999998876544 48999999999999875 799999999999999998887654
No 423
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-37 Score=331.00 Aligned_cols=202 Identities=28% Similarity=0.445 Sum_probs=165.2
Q ss_pred EEEEeEEEEeCCCC-CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------Ee
Q 001580 42 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IR 105 (1050)
Q Consensus 42 i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~~ 105 (1050)
|+++|+++.|+... .+++|+++||++++|++++|+|+||||||||+++|+|.++|++|.+.. .+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996321 127999999999999999999999999999999999999999886532 02
Q ss_pred CcEEEEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHH
Q 001580 106 GTVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 177 (1050)
Q Consensus 106 ~~i~~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~ 177 (1050)
..++|+||++.++ ..|++||+.++.. ... .+....++..++.+..+ ....+|||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKAD-----------AYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhh-----------cChhhCCHHHHHHHH
Confidence 4599999999887 5799999986421 121 12233344444443332 334689999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhh
Q 001580 178 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 178 LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
|||||+.+|+++||||||++||+.++..+++.+.....+ |+|+|++||+++++.. ||++++|++|++++.|+.+++.
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999988776544 8999999999999875 7999999999999999877764
No 424
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.3e-36 Score=322.71 Aligned_cols=193 Identities=26% Similarity=0.333 Sum_probs=162.4
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|+++.|++. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. . ..++.++|
T Consensus 3 l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~-~~~~~~~~ 77 (207)
T PRK13539 3 LEGEDLACVRGGR--VLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--P-DVAEACHY 77 (207)
T ss_pred EEEEeEEEEECCe--EEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--h-hhHhhcEE
Confidence 7899999999643 69999999999999999999999999999999999999999999999998752 2 27888999
Q ss_pred EcCCcccc-cccHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLF-SGTVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf-~~tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
++|++.++ ..|+++|+.+.. ...+.++.++++..++.++. .....+||||||||++||||++++|
T Consensus 78 ~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~al~~~p 146 (207)
T PRK13539 78 LGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAPLA-----------HLPFGYLSAGQKRRVALARLLVSNR 146 (207)
T ss_pred ecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-----------cCChhhcCHHHHHHHHHHHHHhcCC
Confidence 99988776 469999986432 12234455556665554432 2334579999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhhcCEEEEEeC
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLLDS 875 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl~~ 875 (1050)
++|||||||++||+.+.+.+++.|++.. +++|+|++||+++++.. |+++-++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 147 PIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 9999999999999999999999998753 57899999999999987 99887743
No 425
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-37 Score=374.46 Aligned_cols=220 Identities=24% Similarity=0.346 Sum_probs=177.5
Q ss_pred cEEEEEEEEEeCCC--CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecC----------
Q 001580 665 SIKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIA---------- 732 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~--~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~---------- 732 (1050)
.|+++|++++|+.. ..++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 49999999999632 236999999999999999999999999999999999999999999999997552
Q ss_pred CCChH---HHh-hheEEEcCCc--cccc-ccHHHhcccCC----CCCHHHHHHHHHHhcHHHHHHHccCCcc---hhhhc
Q 001580 733 KFGLM---DLR-KILGIIPQSP--VLFS-GTVRFNLDPFS----EHSDADLWEALERAHLKDAIRRNSLGLD---AQVSE 798 (1050)
Q Consensus 733 ~~~~~---~~r-~~i~~v~Q~~--~lf~-~tv~~nl~~~~----~~~~~~~~~~l~~~~~~~~i~~~p~gl~---t~v~~ 798 (1050)
+.+.. .+| +.||||+|+| .++. .||.+|+.+.. .....+.. ..+.+.++.+ |+. .....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~ 164 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM-----VEAKRMLDQV--RIPEAQTILSR 164 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChhhHHhC
Confidence 22322 233 4799999998 5665 49999986421 11111111 1122333332 442 34566
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-C-CcEEEEeecCchhhhh-cCEEEEEeC
Q 001580 799 AGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-K-SCTMLIIAHRLNTIID-CDRILLLDS 875 (1050)
Q Consensus 799 ~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~-~~tvi~vtH~~~~~~~-~d~i~vl~~ 875 (1050)
...+|||||||||+|||||+.+|+||||||||++||+.+.+.+.+.|+++. + ++|||+||||++.+.. ||||++|++
T Consensus 165 ~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~ 244 (623)
T PRK10261 165 YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQ 244 (623)
T ss_pred CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeC
Confidence 678899999999999999999999999999999999999999999999875 3 7899999999999877 999999999
Q ss_pred CEEEEecChhHHhhcC
Q 001580 876 GRVLEYDTPEELLSNE 891 (1050)
Q Consensus 876 G~i~~~g~~~el~~~~ 891 (1050)
|++++.|+++++....
T Consensus 245 G~i~~~g~~~~~~~~~ 260 (623)
T PRK10261 245 GEAVETGSVEQIFHAP 260 (623)
T ss_pred CeecccCCHHHhhcCC
Confidence 9999999999987644
No 426
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-37 Score=306.27 Aligned_cols=202 Identities=24% Similarity=0.383 Sum_probs=170.4
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-----------EeCcEE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVA 109 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-----------~~~~i~ 109 (1050)
++++.+++++|++ ...+++||||++++|+++||.|+|||||||+|++|++++.|++|.+.. .+++||
T Consensus 1 Ml~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IG 78 (245)
T COG4555 1 MLEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIG 78 (245)
T ss_pred CeeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcc
Confidence 4789999999985 234899999999999999999999999999999999999999987643 345799
Q ss_pred EEecCCCCC-cccHHHHhccCCC-CC------HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHH
Q 001580 110 YVPQVSWIF-NATVRDNILFGSA-FE------PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 181 (1050)
Q Consensus 110 ~v~Q~~~l~-~~TV~eni~~g~~-~~------~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAra 181 (1050)
+++-+.-++ ..|++|||.|... ++ +.+.....+..++.+-++ .+..++|-|+||||+||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~-----------rRv~~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLD-----------RRVGEFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHH-----------HHHhhhchhhHHHHHHHHH
Confidence 999777776 7899999986421 11 223334444445444443 3456899999999999999
Q ss_pred HccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhh-hcCEEEEEcCCeEeeccChhhhhc
Q 001580 182 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 182 L~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
|+++|++++|||||||||..+.+.+.+.+...+..|+++|+.||.++++. .||+++++++|+++..|+.+++..
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 99999999999999999999999999998888888999999999999998 589999999999999999887653
No 427
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.2e-36 Score=323.77 Aligned_cols=199 Identities=48% Similarity=0.778 Sum_probs=171.5
Q ss_pred EEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------------EeC
Q 001580 43 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------IRG 106 (1050)
Q Consensus 43 ~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------------~~~ 106 (1050)
.+.|++|.|+.+ +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+.
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 57999999999999999999999999999999999999998875432 124
Q ss_pred cEEEEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCC
Q 001580 107 TVAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNS 186 (1050)
Q Consensus 107 ~i~~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~ 186 (1050)
.++|++|++.+++.|++||+.++.....++....++.+++.+.++..+.++.+.++....+|||||||||+|||||+.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 59999999998888999999986544444556677788888888888888888888888999999999999999999999
Q ss_pred CEEEEeCCCCCcCHHHHHHHHH--HHHccccCCcEEEEeccCcchhhhcCEEEEEcCCe
Q 001580 187 DVFIFDDPLSALDAHVGRQVFD--RCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGM 243 (1050)
Q Consensus 187 ~vllLDEPts~LD~~~~~~l~~--~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~ 243 (1050)
+++||||||++||+.++..+++ .+......|.|+|++||+.+++..+|++++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 9999999999999999999987 33333345899999999999998899999999873
No 428
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.2e-36 Score=323.46 Aligned_cols=193 Identities=23% Similarity=0.375 Sum_probs=161.8
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE----------eCcEEEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI----------RGTVAYV 111 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~----------~~~i~~v 111 (1050)
|+++|++|+|+. +++|+++||++++|++++|+|+||||||||+++|+|+.+|++|.+... +..++||
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 77 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGAL 77 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEe
Confidence 478999999962 579999999999999999999999999999999999999998765331 2359999
Q ss_pred ecCCCCC-cccHHHHhccCCC---CCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 001580 112 PQVSWIF-NATVRDNILFGSA---FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 187 (1050)
Q Consensus 112 ~Q~~~l~-~~TV~eni~~g~~---~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~ 187 (1050)
+|++.++ ..||+||+.++.. .+.++....++..++.+..+ ....+|||||||||+|||||+.+|+
T Consensus 78 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~~p~ 146 (208)
T cd03268 78 IEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAK-----------KKVKGFSLGMKQRLGIALALLGNPD 146 (208)
T ss_pred cCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHh-----------hhHhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999876 6899999976521 23344555566666654433 2346899999999999999999999
Q ss_pred EEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeecc
Q 001580 188 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 248 (1050)
Q Consensus 188 vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g 248 (1050)
++||||||++||+.+++.+++.+.+...+|+|+|++||+++++.. +|++++|++|++++.|
T Consensus 147 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 147 LLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999887665568999999999999875 7999999999988654
No 429
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.2e-36 Score=367.56 Aligned_cols=219 Identities=25% Similarity=0.437 Sum_probs=176.9
Q ss_pred cEEEEEEEEEeCCC--CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC-----CccEEEECCeecCCCChH
Q 001580 665 SIKFEDVVLRYRPE--LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL-----ERGRILIDGFDIAKFGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~--~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p-----~~G~i~~~g~~i~~~~~~ 737 (1050)
.++++|++++|+.+ ..++|+|+||+|.+||++||+||||||||||+++|+|+++| ++|+|.++|.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 38999999999631 23699999999999999999999999999999999999987 799999999999876644
Q ss_pred H---Hh-hheEEEcCCcc--ccc-ccHHHhcccC----CCCCH----HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCC
Q 001580 738 D---LR-KILGIIPQSPV--LFS-GTVRFNLDPF----SEHSD----ADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 802 (1050)
Q Consensus 738 ~---~r-~~i~~v~Q~~~--lf~-~tv~~nl~~~----~~~~~----~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~ 802 (1050)
. +| +++||+||++. ++. .|+.+|+.+. ..... +++.++++..++.+. .........+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~--------~~~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQA--------AKRLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------HHHHhhCCcc
Confidence 3 33 57999999985 444 4888887521 11111 223333333333210 1123555678
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEE
Q 001580 803 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVL 879 (1050)
Q Consensus 803 LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~ 879 (1050)
||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|||+|||+++.+.. ||||++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999864 37899999999999876 9999999999999
Q ss_pred EecChhHHhhcC
Q 001580 880 EYDTPEELLSNE 891 (1050)
Q Consensus 880 ~~g~~~el~~~~ 891 (1050)
+.|+++++....
T Consensus 237 ~~g~~~~~~~~~ 248 (529)
T PRK15134 237 EQNRAATLFSAP 248 (529)
T ss_pred EeCCHHHHhhCC
Confidence 999999987543
No 430
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=8.3e-37 Score=321.99 Aligned_cols=192 Identities=22% Similarity=0.308 Sum_probs=159.0
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
++++|++++|++. ++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ..+++.++|
T Consensus 1 l~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGER--MLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECCE--EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 4689999999653 6999999999999999999999999999999999999999999999999987654 356788999
Q ss_pred EcCCccccc-ccHHHhcccCCC---CCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCC
Q 001580 746 IPQSPVLFS-GTVRFNLDPFSE---HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRS 821 (1050)
Q Consensus 746 v~Q~~~lf~-~tv~~nl~~~~~---~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p 821 (1050)
+||++.+|. .|+++|+.+... ..+..+.++++..++.++ ......+||||||||++||||++++|
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la~al~~~p 146 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTGF-----------EDLPAAQLSAGQQRRLALARLWLSRA 146 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCCHHH-----------hcCChhhcCHHHHHHHHHHHHHhcCC
Confidence 999998886 599999864321 112235555555555443 33445689999999999999999999
Q ss_pred CEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhhcCEEEE
Q 001580 822 KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILL 872 (1050)
Q Consensus 822 ~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~v 872 (1050)
++|||||||++||+.+.+.+++.|+++. .+.|+|++||+...+ .|++++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~-~~~~~~~ 197 (198)
T TIGR01189 147 PLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGL-VEARELR 197 (198)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccccc-cceEEee
Confidence 9999999999999999999999999863 578999999998544 2566654
No 431
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.1e-36 Score=366.01 Aligned_cols=213 Identities=23% Similarity=0.406 Sum_probs=176.1
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccC--CccEEEECCeecCCCChHH-Hhhh
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVEL--ERGRILIDGFDIAKFGLMD-LRKI 742 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p--~~G~i~~~g~~i~~~~~~~-~r~~ 742 (1050)
++++|++++|++ .++|+|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+... .++.
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999964 3699999999999999999999999999999999999987 7999999999998766554 4567
Q ss_pred eEEEcCCcccccc-cHHHhcccCCC-------CCHHHHHHHHHHhcHHHHHHHccCCcchhh-hcCCCCCChhHHHHHHH
Q 001580 743 LGIIPQSPVLFSG-TVRFNLDPFSE-------HSDADLWEALERAHLKDAIRRNSLGLDAQV-SEAGENFSVGQRQLLSL 813 (1050)
Q Consensus 743 i~~v~Q~~~lf~~-tv~~nl~~~~~-------~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v-~~~~~~LSgGq~qrl~l 813 (1050)
++|+||++.+|.. |+++|+.+... ....+.. ..+.++++.+ |+.... .....+|||||||||+|
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~i 152 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLREL--QLDADNVTRPVGDYGGGQQQLVEI 152 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccCchhhCCHHHHHHHHH
Confidence 9999999988765 99999865321 1111111 1233444443 333222 23356799999999999
Q ss_pred HHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 001580 814 SRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 814 Arall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 887 (1050)
||||+.+|+||||||||++||+.+...+.+.|+++. +++|||+|||+++++.. ||+|++|++|+++..|+++++
T Consensus 153 A~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (500)
T TIGR02633 153 AKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTM 228 (500)
T ss_pred HHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccC
Confidence 999999999999999999999999999999998864 47899999999999977 999999999999999987765
No 432
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=337.77 Aligned_cols=206 Identities=25% Similarity=0.439 Sum_probs=167.2
Q ss_pred cEEEEeEEEEeCCCC--CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------
Q 001580 41 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 103 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------- 103 (1050)
.|+++|++++|+... .+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|.+..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999997321 257999999999999999999999999999999999999999886432
Q ss_pred -EeCcEEEEecCC--CCCcccHHHHhccCCC---CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHH
Q 001580 104 -IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 173 (1050)
Q Consensus 104 -~~~~i~~v~Q~~--~l~~~TV~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqr 173 (1050)
.+..|+|++|+| .++..||.||+.++.. .... +....++.+++... .......+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~ 151 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSED----------LISKSPFELSGGQM 151 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhhCCcccCCHHHH
Confidence 123599999998 4667899999987521 1211 22333444444311 12334578999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 174 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 174 qRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
||++|||||+.+|++|||||||++||+.+++++.+.+.+...+|.|+|++||+++++.. ||++++|++|++++.|++++
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKE 231 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999887765568999999999999865 79999999999999999888
Q ss_pred hhcC
Q 001580 253 LSNN 256 (1050)
Q Consensus 253 l~~~ 256 (1050)
+...
T Consensus 232 ~~~~ 235 (287)
T PRK13641 232 IFSD 235 (287)
T ss_pred HhcC
Confidence 7654
No 433
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=336.83 Aligned_cols=206 Identities=25% Similarity=0.419 Sum_probs=170.6
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE--------------Ee
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------IR 105 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------~~ 105 (1050)
+.|+++|++|+|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.+.. .+
T Consensus 4 ~~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~ 81 (283)
T PRK13636 4 YILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLR 81 (283)
T ss_pred ceEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHH
Confidence 36999999999962 356999999999999999999999999999999999999999875432 12
Q ss_pred CcEEEEecCC--CCCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHH
Q 001580 106 GTVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 176 (1050)
Q Consensus 106 ~~i~~v~Q~~--~l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv 176 (1050)
..+||++|++ .++..||+||+.++.. ... ++...+++..++.... .....+||||||||+
T Consensus 82 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl 150 (283)
T PRK13636 82 ESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRV 150 (283)
T ss_pred hhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHHH
Confidence 3599999998 4568899999987521 121 2234445555554433 234568999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhh-hcCEEEEEcCCeEeeccChhhhh
Q 001580 177 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 177 ~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
+|||||+.+|++|||||||++||+.++..+++.+.+...+ |+|+|++||+++++. .|||+++|++|++++.|+++++.
T Consensus 151 ~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 151 AIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999988766544 899999999999987 58999999999999999998887
Q ss_pred cChH
Q 001580 255 NNGE 258 (1050)
Q Consensus 255 ~~~~ 258 (1050)
....
T Consensus 231 ~~~~ 234 (283)
T PRK13636 231 AEKE 234 (283)
T ss_pred cCHH
Confidence 6543
No 434
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-36 Score=320.93 Aligned_cols=197 Identities=29% Similarity=0.465 Sum_probs=169.8
Q ss_pred cEEEEEEEEEeCCCC-------CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChH
Q 001580 665 SIKFEDVVLRYRPEL-------PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 737 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~-------~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~ 737 (1050)
.++++|+++.|+... ..+++||||+|++||++||||.|||||||+-++|+|+++|++|+|.++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 388999999995321 36899999999999999999999999999999999999999999999999986654
Q ss_pred HHhhheEEEcCCcccccccHHHhcccCCCCCHHHHHHHHHHhcHHH-HHHHccCCcchhhhcCCCCCChhHHHHHHHHHH
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSEHSDADLWEALERAHLKD-AIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~~~~~-~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAra 816 (1050)
.....+++.+.++.+++.+ ++.+. ...|||||+||++||||
T Consensus 82 ---------------------------~~~~~~~v~elL~~Vgl~~~~~~ry-----------PhelSGGQrQRi~IARA 123 (268)
T COG4608 82 ---------------------------KEERRERVLELLEKVGLPEEFLYRY-----------PHELSGGQRQRIGIARA 123 (268)
T ss_pred ---------------------------hhHHHHHHHHHHHHhCCCHHHhhcC-----------CcccCchhhhhHHHHHH
Confidence 1112345777777776643 44444 46899999999999999
Q ss_pred HccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSNEGS 893 (1050)
Q Consensus 817 ll~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~~~~ 893 (1050)
|+-+|+++++|||||+||.-.++.+...|.++. .+-|.++||||++.+.. ||||.||..|+|+|.|+.+++..++..
T Consensus 124 Lal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p~H 203 (268)
T COG4608 124 LALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNPLH 203 (268)
T ss_pred HhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCCCC
Confidence 999999999999999999999999999998865 37899999999999998 999999999999999999999998777
Q ss_pred hHHHHHHh
Q 001580 894 SFSKMVQS 901 (1050)
Q Consensus 894 ~~~~~~~~ 901 (1050)
.|.+..-+
T Consensus 204 pYTk~Ll~ 211 (268)
T COG4608 204 PYTKALLS 211 (268)
T ss_pred HHHHHHHH
Confidence 77765543
No 435
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-37 Score=331.87 Aligned_cols=199 Identities=27% Similarity=0.432 Sum_probs=162.7
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------EeC
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IRG 106 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~~~ 106 (1050)
++++|++++|+. ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999963 257999999999999999999999999999999999999998876432 123
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCCC------------CH---HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSAF------------EP---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISG 170 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~~------------~~---~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSG 170 (1050)
.++|+||++.++ ..||+||+.++... .. ++....++..++.. .....+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccCCH
Confidence 599999999876 57999999865210 11 11222233333322 23345578999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhh-hcCEEEEEcCCeEeecc
Q 001580 171 GQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEG 248 (1050)
Q Consensus 171 GqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~-~~d~i~~l~~G~i~~~g 248 (1050)
||||||+|||||+.+|+++||||||++||+.+++.+++.+.+... .|+|+|++||+++++. .||++++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 999999999999999999999999999999999999998877644 4899999999999988 47999999999999999
Q ss_pred Chhhh
Q 001580 249 TFEDL 253 (1050)
Q Consensus 249 ~~~~l 253 (1050)
+++++
T Consensus 228 ~~~~~ 232 (241)
T cd03256 228 PPAEL 232 (241)
T ss_pred CHHHh
Confidence 88775
No 436
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=6.6e-35 Score=374.95 Aligned_cols=93 Identities=14% Similarity=0.229 Sum_probs=84.5
Q ss_pred hcCCCCCChhHHHHHHHHHHHccCC--CEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhhcCEEEEE
Q 001580 797 SEAGENFSVGQRQLLSLSRALLRRS--KILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIIDCDRILLL 873 (1050)
Q Consensus 797 ~~~~~~LSgGq~qrl~lArall~~p--~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~~d~i~vl 873 (1050)
+....+|||||-||+-||+.|-.+= =+++|||||.||-+.-...+.+.|+++. .|+|||+|-||.++++.||+|+-|
T Consensus 1382 ~R~~~TLSGGE~QRirLa~~lgs~L~gvlYVLDEPSiGLHp~D~~~Li~~L~~Lrd~GNTvivVEHd~~~i~~AD~iidi 1461 (1809)
T PRK00635 1382 GQEQDTLSDGEHYRLHLAKKISSNLTDIIYLLEDPLSGLHPQDAPTLLQLIKELVTNNNTVIATDRSGSLAEHADHLIHL 1461 (1809)
T ss_pred cCCCCCCcchHHHHHHHHHHhcCCCceeEEEeCCCCcCCChhHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEe
Confidence 4567789999999999999998763 4789999999999999999999999987 489999999999999999999999
Q ss_pred ------eCCEEEEecChhHHhh
Q 001580 874 ------DSGRVLEYDTPEELLS 889 (1050)
Q Consensus 874 ------~~G~i~~~g~~~el~~ 889 (1050)
..|+|+++|+++++..
T Consensus 1462 GPgAG~~GG~iv~~G~~~~l~~ 1483 (1809)
T PRK00635 1462 GPGSGPQGGYLLSTSALKQSQP 1483 (1809)
T ss_pred CCCccCCCCEEEecCCHHHHhh
Confidence 4699999999999975
No 437
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.4e-36 Score=328.55 Aligned_cols=200 Identities=24% Similarity=0.390 Sum_probs=163.4
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeCcE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGTV 108 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~~i 108 (1050)
|+++|+++.|+. +++|+|+||++++|++++|+|+||||||||+++|+|.++|++|.+.. .+..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 478999999963 46999999999999999999999999999999999999999886532 12359
Q ss_pred EEEecCCCCCc-ccHHHHhccCCC---CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHH
Q 001580 109 AYVPQVSWIFN-ATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 180 (1050)
Q Consensus 109 ~~v~Q~~~l~~-~TV~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAr 180 (1050)
+|++|++.++. .||+||+.++.. .... +....++..++.+ .......+|||||||||+|||
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~ 146 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITH-----------LRKSKASSLSGGERRRVEIAR 146 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHHHHHH
Confidence 99999998874 699999986521 1111 1222233333322 233445789999999999999
Q ss_pred HHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 181 AVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 181 aL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
||+.+|++|||||||++||+.+++.+++.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+.+++..
T Consensus 147 al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 147 ALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999999999999999999999887665568999999999988765 79999999999999998887654
No 438
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=5.8e-37 Score=347.77 Aligned_cols=190 Identities=24% Similarity=0.381 Sum_probs=160.2
Q ss_pred CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------E----eCcEEEEecCCCCC-
Q 001580 56 ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------I----RGTVAYVPQVSWIF- 118 (1050)
Q Consensus 56 ~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~----~~~i~~v~Q~~~l~- 118 (1050)
.+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|.+.. . +..||||+|++++|
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 457999999999999999999999999999999999999999886542 1 34699999999998
Q ss_pred cccHHHHhccCCCC---CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEE
Q 001580 119 NATVRDNILFGSAF---EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIF 191 (1050)
Q Consensus 119 ~~TV~eni~~g~~~---~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllL 191 (1050)
..||+|||.|+... .. ++..+.++..++....+ ....+|||||||||+|||||+.+|+|+||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~-----------~~p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEH-----------RYPDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhh-----------CChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 57999999986321 11 22334455555544333 34468999999999999999999999999
Q ss_pred eCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 192 DDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 192 DEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
||||++|||.+++++.+.+.+... .|+|+|+||||++++.. ||+|++|++|++++.|+++++..+
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999999998887644 48999999999998755 899999999999999999998765
No 439
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.6e-36 Score=319.52 Aligned_cols=190 Identities=24% Similarity=0.403 Sum_probs=160.4
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCc
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 107 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~ 107 (1050)
..++++|++++|+.. .+++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 458999999999742 247999999999999999999999999999999999999999886543 1345
Q ss_pred EEEEecCCCCCcccHHHHhccCCCCCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCC
Q 001580 108 VAYVPQVSWIFNATVRDNILFGSAFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSD 187 (1050)
Q Consensus 108 i~~v~Q~~~l~~~TV~eni~~g~~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~ 187 (1050)
|+||+|+|.+++.||+||+.+......++....++ ++.....|||||+||++|||||+.+|+
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999988889999997654333222222111 234567899999999999999999999
Q ss_pred EEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeEeeccC
Q 001580 188 VFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGT 249 (1050)
Q Consensus 188 vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~ 249 (1050)
++||||||++||+.++..+++.+.+.. +|+|+|++||+.+++..+|++++|++|++.+.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQKTIREEF-TNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 999999999999999999999887653 5899999999999988899999999999987765
No 440
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.5e-36 Score=323.98 Aligned_cols=193 Identities=31% Similarity=0.461 Sum_probs=158.7
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------EeCcEEEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------IRGTVAYV 111 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------~~~~i~~v 111 (1050)
|+++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..++|+
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEE
Confidence 478999999963 47999999999999999999999999999999999999998876532 12359999
Q ss_pred ecCCCCC-cccHHHHhccCCC---CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 001580 112 PQVSWIF-NATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVY 183 (1050)
Q Consensus 112 ~Q~~~l~-~~TV~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~ 183 (1050)
+|++.++ ..||+||+.++.. .... ++...++..++....+ ....+||||||||++|||||+
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~laral~ 146 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLD-----------RKPKQLSGGQRQRVALGRAIV 146 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHh-----------CChhhCCHHHHHHHHHHHHHh
Confidence 9999887 6799999987521 1221 2233344444443333 334689999999999999999
Q ss_pred cCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeecc
Q 001580 184 SNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 248 (1050)
Q Consensus 184 ~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g 248 (1050)
.+|+++||||||++||+.+++++++.+.+... .|+|+|++||+++++.. +|++++|++|++++.|
T Consensus 147 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 147 REPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999998877654 48999999999999876 7999999999988754
No 441
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.7e-36 Score=325.02 Aligned_cols=204 Identities=26% Similarity=0.430 Sum_probs=169.8
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE------------eCc
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGT 107 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~------------~~~ 107 (1050)
+.++++|+++.|+....+++|+++||+|++|++++|+|+||||||||+++|+|+++|++|.+... +..
T Consensus 10 ~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 89 (226)
T cd03248 10 GIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHSK 89 (226)
T ss_pred ceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHhh
Confidence 46999999999974333579999999999999999999999999999999999999998865321 235
Q ss_pred EEEEecCCCCCcccHHHHhccCCCC-CHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCC
Q 001580 108 VAYVPQVSWIFNATVRDNILFGSAF-EPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNS 186 (1050)
Q Consensus 108 i~~v~Q~~~l~~~TV~eni~~g~~~-~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~ 186 (1050)
++|++|++.++..||+||+.++... ....+....+...+.+.++.++.|..+.++....+|||||||||+|||||+.+|
T Consensus 90 i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~p 169 (226)
T cd03248 90 VSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRNP 169 (226)
T ss_pred EEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 9999999988888999999876432 222222233334556667777656566678888999999999999999999999
Q ss_pred CEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhhcCEEEEEcCCeE
Q 001580 187 DVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQVDRIILVHEGMV 244 (1050)
Q Consensus 187 ~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~G~i 244 (1050)
+++||||||++||+.+++++.+.+.+... ++|+|++||+++++..||+|++|++|++
T Consensus 170 ~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 170 QVLILDEATSALDAESEQQVQQALYDWPE-RRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHcC-CCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999998876543 6899999999999988999999999863
No 442
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.4e-36 Score=325.51 Aligned_cols=196 Identities=23% Similarity=0.386 Sum_probs=160.2
Q ss_pred EEEEeEEEEeCCCCC-CCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-----------EeCcEE
Q 001580 42 ISIRNGYFSWDSKAE-RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVA 109 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~-~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-----------~~~~i~ 109 (1050)
|+++|++++|+.... +++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 789999999974211 26999999999999999999999999999999999999999886532 123599
Q ss_pred EEecCCCCCc-ccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHH
Q 001580 110 YVPQVSWIFN-ATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 181 (1050)
Q Consensus 110 ~v~Q~~~l~~-~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAra 181 (1050)
|++|++.++. .||+||+.+... ... .+..+.++..++.+.+ .....+||||||||++||||
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~lara 150 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELL-----------DRRVGGFSTGMRQKVAIARA 150 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hhhhhhcCHHHHHHHHHHHH
Confidence 9999998875 699999975321 111 2233344555554333 33456899999999999999
Q ss_pred HccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeecc
Q 001580 182 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEG 248 (1050)
Q Consensus 182 L~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g 248 (1050)
|+.+|+++||||||++||+.+++++++.+.+...+|+|+|++||+++++.. +|++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999999887765568999999999999875 7999999999987643
No 443
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-36 Score=331.10 Aligned_cols=206 Identities=24% Similarity=0.378 Sum_probs=166.2
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC-----CCCeeE-----------
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV-----SDASAV----------- 103 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~-----~g~~~~----------- 103 (1050)
+.|+++|++++|+. +++|+|+||++++||+++|+|+||||||||+++|+|+++|+ +|.+..
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 46999999999963 46999999999999999999999999999999999999874 564321
Q ss_pred ---EeCcEEEEecCCCCCcccHHHHhccCCCC----CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHH
Q 001580 104 ---IRGTVAYVPQVSWIFNATVRDNILFGSAF----EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 172 (1050)
Q Consensus 104 ---~~~~i~~v~Q~~~l~~~TV~eni~~g~~~----~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGq 172 (1050)
.+..|+|++|++.++..||+||+.++... .. ++....++.+++...+. ........+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcccCCHHH
Confidence 12359999999988889999999876321 11 12223334444322111 11234567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChh
Q 001580 173 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFE 251 (1050)
Q Consensus 173 rqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 251 (1050)
||||+|||||+.+|++|||||||++||+.+++++++.+.+.. ++.|+|++||+++++.. +||+++|++|++++.|+++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 234 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTD 234 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999877764 47899999999999865 7999999999999999988
Q ss_pred hhhcC
Q 001580 252 DLSNN 256 (1050)
Q Consensus 252 ~l~~~ 256 (1050)
++..+
T Consensus 235 ~~~~~ 239 (254)
T PRK14273 235 ELFFN 239 (254)
T ss_pred HHHhC
Confidence 87643
No 444
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.3e-36 Score=324.34 Aligned_cols=190 Identities=31% Similarity=0.530 Sum_probs=156.2
Q ss_pred EEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------eCcEEEEecCC
Q 001580 43 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------RGTVAYVPQVS 115 (1050)
Q Consensus 43 ~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------~~~i~~v~Q~~ 115 (1050)
+++|++++|+. +++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+..- +..++|++|++
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~ 77 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRR 77 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecccc
Confidence 36899999963 469999999999999999999999999999999999999998876432 23599999998
Q ss_pred CC---CcccHHHHhccCCCC--------C---HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHH
Q 001580 116 WI---FNATVRDNILFGSAF--------E---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 181 (1050)
Q Consensus 116 ~l---~~~TV~eni~~g~~~--------~---~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAra 181 (1050)
.+ +..||+||+.++... . .++....++..++....+. ...+|||||||||+||||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~la~a 146 (213)
T cd03235 78 SIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-----------QIGELSGGQQQRVLLARA 146 (213)
T ss_pred ccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHHHHHHH
Confidence 75 457999999875321 1 1233445555565543332 346899999999999999
Q ss_pred HccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeec
Q 001580 182 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEE 247 (1050)
Q Consensus 182 L~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~ 247 (1050)
|+.+|++|||||||++||+.+++++.+.+.+...+|+|+|++||+++++.. ||++++|++| +++.
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~ 212 (213)
T cd03235 147 LVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVAS 212 (213)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-Eeec
Confidence 999999999999999999999999999887765578999999999999876 7999999986 4443
No 445
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.7e-36 Score=325.76 Aligned_cols=200 Identities=29% Similarity=0.497 Sum_probs=161.7
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeCcE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGTV 108 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~~i 108 (1050)
|+++|++++|+. +++|+++||++++|++++|+||||||||||+++|+|+++|++|.+.. .+..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 478999999963 47999999999999999999999999999999999999999886532 12359
Q ss_pred EEEecCCCCCc-ccHHHHhccCCCCC--HH---HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 001580 109 AYVPQVSWIFN-ATVRDNILFGSAFE--PA---RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 182 (1050)
Q Consensus 109 ~~v~Q~~~l~~-~TV~eni~~g~~~~--~~---~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL 182 (1050)
+|++|++.++. .|++||+.++.... .+ +....++.. ..++ ........+||||||||++|||||
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~------~~l~----~~~~~~~~~LS~G~~qrv~laral 147 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELF------PRLK----ERRKQLAGTLSGGEQQMLAIARAL 147 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHH------Hhhh----hhhhCchhhCCHHHHHHHHHHHHH
Confidence 99999998875 69999998763221 11 111122221 1111 123345578999999999999999
Q ss_pred ccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhh
Q 001580 183 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 183 ~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
+.+|+++||||||++||+.++..+++.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+.+++.
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 148 MSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999999999999999999999887665568999999999998765 7999999999999988877654
No 446
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.3e-36 Score=326.07 Aligned_cols=196 Identities=24% Similarity=0.363 Sum_probs=161.0
Q ss_pred CcEEEEeEEEEeCCCCC-CCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----E----------
Q 001580 40 PAISIRNGYFSWDSKAE-RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----I---------- 104 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~-~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----~---------- 104 (1050)
+.|+++|++++|+.... +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. +
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 46999999999974222 35999999999999999999999999999999999999999886532 1
Q ss_pred --eCcEEEEecCCCCC-cccHHHHhccCCC---CC----HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHH
Q 001580 105 --RGTVAYVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 174 (1050)
Q Consensus 105 --~~~i~~v~Q~~~l~-~~TV~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrq 174 (1050)
+..++|++|++.++ ..||.||+.++.. .. .++....++..++.+.++.. ..+|||||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Ge~q 153 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHL-----------PAQLSGGEQQ 153 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHH
Confidence 13599999999887 4699999976421 11 12334445555655444332 3589999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhhcCEEEEEcCCeEee
Q 001580 175 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKE 246 (1050)
Q Consensus 175 Rv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~ 246 (1050)
|++|||||+.+|+++||||||++||+.+.+++++.+.+... .|.|+|++||+++++..+|++++|++|++++
T Consensus 154 rl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~ 226 (228)
T PRK10584 154 RVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQE 226 (228)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999998877644 4889999999999988899999999999864
No 447
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.8e-36 Score=325.28 Aligned_cols=193 Identities=23% Similarity=0.396 Sum_probs=157.4
Q ss_pred EEEEeEEEEeCCCC-CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE----------------
Q 001580 42 ISIRNGYFSWDSKA-ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI---------------- 104 (1050)
Q Consensus 42 i~~~~~~f~~~~~~-~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~---------------- 104 (1050)
|+++|++++|+... .+++|+++||++++|++++|+||||||||||+++|+|+++|++|.+..-
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996322 2479999999999999999999999999999999999999998865321
Q ss_pred eCcEEEEecCCCCC-cccHHHHhccCC---CCCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHH
Q 001580 105 RGTVAYVPQVSWIF-NATVRDNILFGS---AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 176 (1050)
Q Consensus 105 ~~~i~~v~Q~~~l~-~~TV~eni~~g~---~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv 176 (1050)
+..++|++|++.++ ..||+||+.++. ..+. ++..+.++..++.+.. .....+|||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRI-----------NHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHH
Confidence 13599999999887 579999998642 1221 1222334444443322 233468999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhhcCEEEEEcCCeEe
Q 001580 177 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVK 245 (1050)
Q Consensus 177 ~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~ 245 (1050)
+|||||+.+|++|||||||++||+.+++.+.+.+.+... .|+|+|++|||++++..+|++++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 999999999999999999999999999999998876544 489999999999999889999999999875
No 448
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-36 Score=345.81 Aligned_cols=216 Identities=26% Similarity=0.393 Sum_probs=178.2
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhh-he
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRK-IL 743 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~-~i 743 (1050)
.++++|++|+|++- ++|+||||++.+||+.|++|.||||||||+|+|+|.|+|++|+|.++|+++.-.++.+.++ .|
T Consensus 8 ll~~~~i~K~FggV--~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI 85 (500)
T COG1129 8 LLELRGISKSFGGV--KALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGI 85 (500)
T ss_pred eeeeecceEEcCCc--eeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCc
Confidence 48999999999764 7999999999999999999999999999999999999999999999999999888877655 59
Q ss_pred EEEcCCcccccc-cHHHhcccCCCCCH--HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccC
Q 001580 744 GIIPQSPVLFSG-TVRFNLDPFSEHSD--ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRR 820 (1050)
Q Consensus 744 ~~v~Q~~~lf~~-tv~~nl~~~~~~~~--~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~ 820 (1050)
+.|+|+..|+.. ||.|||.++.+... .-+.+..-.....+.+.++....+ ......+||+||||.|+||||+..+
T Consensus 86 ~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~--~~~~v~~LsiaqrQ~VeIArAl~~~ 163 (500)
T COG1129 86 ATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID--PDTLVGDLSIAQRQMVEIARALSFD 163 (500)
T ss_pred EEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC--hhhhhhhCCHHHHHHHHHHHHHhcC
Confidence 999999999866 99999965543221 001111111122334444322211 3344457999999999999999999
Q ss_pred CCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecCh
Q 001580 821 SKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTP 884 (1050)
Q Consensus 821 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~ 884 (1050)
++||||||||++|+....+.+.+.++++. +|.++|+|||+|+++.. ||||.||.||+.+..+..
T Consensus 164 arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~ 229 (500)
T COG1129 164 ARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPT 229 (500)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeeccc
Confidence 99999999999999999999999999876 58999999999999977 999999999999987763
No 449
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.9e-36 Score=328.30 Aligned_cols=201 Identities=21% Similarity=0.379 Sum_probs=164.8
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----E-------eCcEE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----I-------RGTVA 109 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----~-------~~~i~ 109 (1050)
.++++|++++|+ ++++|+++||+|++|++++|+|+||||||||+++|+|.++|++|.+.. + ...++
T Consensus 1 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~ 77 (236)
T TIGR03864 1 ALEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLG 77 (236)
T ss_pred CEEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEE
Confidence 378999999996 357999999999999999999999999999999999999999886532 1 12599
Q ss_pred EEecCCCC-CcccHHHHhccCCC---CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHH
Q 001580 110 YVPQVSWI-FNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 181 (1050)
Q Consensus 110 ~v~Q~~~l-~~~TV~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAra 181 (1050)
|++|++.+ +..|++||+.++.. .... +....++..++.. ..+....+||||||||++||||
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~qrl~lara 146 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAE-----------RADDKVRELNGGHRRRVEIARA 146 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhcCChhhCCHHHHHHHHHHHH
Confidence 99999987 47899999976421 1111 1122233333322 2344557899999999999999
Q ss_pred HccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhc
Q 001580 182 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 182 L~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
|+.+|+++||||||++||+.+++++++.+.+... +|+|+|++||+++++..||++++|++|++++.|+++++..
T Consensus 147 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 147 LLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHH
Confidence 9999999999999999999999999998877653 5899999999999998899999999999999998877654
No 450
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-36 Score=334.18 Aligned_cols=207 Identities=28% Similarity=0.418 Sum_probs=172.4
Q ss_pred cEEEEeEEEEeCCCC---CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------E
Q 001580 41 AISIRNGYFSWDSKA---ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------I 104 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~---~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~ 104 (1050)
+++++|++|+|+... .+++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+.. .
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 589999999997421 357999999999999999999999999999999999999999885432 1
Q ss_pred eCcEEEEecCCC--CCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHH
Q 001580 105 RGTVAYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 175 (1050)
Q Consensus 105 ~~~i~~v~Q~~~--l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqR 175 (1050)
+..+||+||+|. ++..||.+|+.|+.. ... .++..+++.+++...++.. ..+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHA-----------PHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHH
Confidence 235999999985 566799999988632 121 2344456666666554433 35899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhh
Q 001580 176 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 176 v~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
|+|||||+.+|+++||||||++||+.++..+.+.+.+..+ .|.|+|++||+++++..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999998876644 489999999999998889999999999999999998887
Q ss_pred cChH
Q 001580 255 NNGE 258 (1050)
Q Consensus 255 ~~~~ 258 (1050)
....
T Consensus 233 ~~~~ 236 (280)
T PRK13633 233 KEVE 236 (280)
T ss_pred cChH
Confidence 6543
No 451
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-36 Score=333.64 Aligned_cols=206 Identities=24% Similarity=0.377 Sum_probs=169.7
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCC---CCeeE------------E
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVS---DASAV------------I 104 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~---g~~~~------------~ 104 (1050)
..|+++|++|.|+.. .+++|+++||+|++|++++|+|+||||||||+++|+|+++|++ |.+.. .
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 358999999999632 3579999999999999999999999999999999999999987 43321 1
Q ss_pred eCcEEEEecCCC--CCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHH
Q 001580 105 RGTVAYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 175 (1050)
Q Consensus 105 ~~~i~~v~Q~~~--l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqR 175 (1050)
+..||||+|+|. ++..||+||+.++.. ... +++...++.+++....+.. ..+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSE-----------PANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHH
Confidence 235999999984 458899999987621 122 2234455566665444333 36899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhh
Q 001580 176 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLS 254 (1050)
Q Consensus 176 v~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 254 (1050)
|+|||||+.+|+++||||||++||+.+++.+.+.+.+... .|+|+|++||+++++..||++++|++|++++.|+++++.
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999998876654 489999999999999879999999999999999998876
Q ss_pred cCh
Q 001580 255 NNG 257 (1050)
Q Consensus 255 ~~~ 257 (1050)
...
T Consensus 232 ~~~ 234 (282)
T PRK13640 232 SKV 234 (282)
T ss_pred cCH
Confidence 543
No 452
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=6.9e-36 Score=367.43 Aligned_cols=232 Identities=22% Similarity=0.310 Sum_probs=192.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhcccC-----CC-C-------------------CCCCCCCcEEEEeEEEEeCCCCCC
Q 001580 3 VVAWQVVNANVSLKRMEEFLLAEEKILL-----PN-P-------------------PLTSGLPAISIRNGYFSWDSKAER 57 (1050)
Q Consensus 3 ~~i~~~~~a~~s~~Ri~~fl~~~e~~~~-----~~-~-------------------~~~~~~~~i~~~~~~f~~~~~~~~ 57 (1050)
..+..+.++.++.+||.++++.++.... +. + ........|+++|++|+|+. ++
T Consensus 388 ~~~~~i~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~ 465 (659)
T TIGR00954 388 LAGRDMTRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GD 465 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CC
Confidence 4577888999999999999986542210 00 0 00112235999999999973 34
Q ss_pred CceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-eCcEEEEecCCCCCcccHHHHhccCCC-----
Q 001580 58 PTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-RGTVAYVPQVSWIFNATVRDNILFGSA----- 131 (1050)
Q Consensus 58 ~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-~~~i~~v~Q~~~l~~~TV~eni~~g~~----- 131 (1050)
++|+|+||++++|++++|+||||||||||+++|+|+++|++|.+..- +..++||||+|.++++||+||+.++..
T Consensus 466 ~il~~isl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~ 545 (659)
T TIGR00954 466 VLIESLSFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMK 545 (659)
T ss_pred eeeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhh
Confidence 79999999999999999999999999999999999999988765432 446999999999998899999998731
Q ss_pred ---CCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHH
Q 001580 132 ---FEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFD 208 (1050)
Q Consensus 132 ---~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~ 208 (1050)
...++...+++.+++.+.++. +.|++|..+ .+.+||||||||++|||||+++|+++||||||++||+.+++++.+
T Consensus 546 ~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~ 623 (659)
T TIGR00954 546 RRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYR 623 (659)
T ss_pred ccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHH
Confidence 234566778888999887777 778888765 567999999999999999999999999999999999999999998
Q ss_pred HHHccccCCcEEEEeccCcchhhhcCEEEEEcC
Q 001580 209 RCIRGELSGKTRVLVTNQLHFLSQVDRIILVHE 241 (1050)
Q Consensus 209 ~l~~~~~~g~t~ilvtH~~~~l~~~d~i~~l~~ 241 (1050)
.+.+ .|+|+|+|||+++.+..||++++|+.
T Consensus 624 ~l~~---~~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 624 LCRE---FGITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHH---cCCEEEEEeCchHHHHhCCEEEEEeC
Confidence 7754 37999999999999999999999963
No 453
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-36 Score=335.46 Aligned_cols=200 Identities=27% Similarity=0.391 Sum_probs=163.6
Q ss_pred EEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----------------EeC
Q 001580 43 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------IRG 106 (1050)
Q Consensus 43 ~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------------~~~ 106 (1050)
.++|+++.|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+.
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 4567777775 356899999999999999999999999999999999999998876432 023
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
.++|++|++.++ ..||+||+.++.. ... +++...++..++.+.++.. ..+|||||||||+|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKY-----------PDELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------cccCCHHHHHHHHH
Confidence 599999999887 6799999987421 111 2234445555655444433 35899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
||||+.+|++|||||||++||+.+++.+++.+.+... .|+|+|++||+++++.. ||++++|++|++++.|+++++.+.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998876543 48999999999999865 799999999999999998887643
No 454
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=333.10 Aligned_cols=207 Identities=23% Similarity=0.344 Sum_probs=171.1
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i 108 (1050)
.|+++|++|+|+....+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|.+.. .+..+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 589999999997433346999999999999999999999999999999999999999886532 12359
Q ss_pred EEEecCCC--CCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHH
Q 001580 109 AYVPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 179 (1050)
Q Consensus 109 ~~v~Q~~~--l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LA 179 (1050)
||++|+|. ++..||.||+.++.. ... +++..+++.+++....+. ...+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 99999984 567899999987521 122 123344555555443332 3468999999999999
Q ss_pred HHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcChH
Q 001580 180 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGE 258 (1050)
Q Consensus 180 raL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 258 (1050)
|||+.+|+++||||||++||+.+++.+.+.+.+...+ |.|+|++||+++++..||+|++|++|++++.|+++++....+
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 232 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATSE 232 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHH
Confidence 9999999999999999999999999999988766544 899999999999998899999999999999999988776543
No 455
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-37 Score=290.72 Aligned_cols=212 Identities=28% Similarity=0.414 Sum_probs=183.0
Q ss_pred cEEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCe--ecCCCC----hHH
Q 001580 665 SIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGF--DIAKFG----LMD 738 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~--~i~~~~----~~~ 738 (1050)
.|++++++|.|+.. .+|.||+|+-+.||.+.++||||||||||++.|.=+--|.+|+..|.|. |.++.+ ...
T Consensus 2 sirv~~in~~yg~~--q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k~i~~ 79 (242)
T COG4161 2 SIQLNGINCFYGAH--QALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRD 79 (242)
T ss_pred ceEEcccccccccc--hheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccHHHHHH
Confidence 38899999999765 6999999999999999999999999999999999999999999999875 333333 346
Q ss_pred HhhheEEEcCCcccccc-cHHHhcccCC--------CCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHH
Q 001580 739 LRKILGIIPQSPVLFSG-TVRFNLDPFS--------EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~-tv~~nl~~~~--------~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~q 809 (1050)
+|+.+|+|+|...|+.. ||-+||.-.. +....+..+.+++..+.++.+++|. .|||||+|
T Consensus 80 lr~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~~adr~pl-----------hlsggqqq 148 (242)
T COG4161 80 LRRNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKPYADRYPL-----------HLSGGQQQ 148 (242)
T ss_pred HHHhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhccccccccCce-----------ecccchhh
Confidence 89999999999999976 9999984211 1123345566777777777777774 69999999
Q ss_pred HHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC-CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK-SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEEL 887 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el 887 (1050)
|++|||||+.+|++|++||||++|||+-...+.+.|+++.. |.|-++|||..+..+. |.+|+.|++|+|+|.|+++-+
T Consensus 149 rvaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~va~k~as~vvyme~g~ive~g~a~~f 228 (242)
T COG4161 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred hHHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeecCeeEeecchhhc
Confidence 99999999999999999999999999999999999999764 7899999999999987 999999999999999998877
Q ss_pred hh
Q 001580 888 LS 889 (1050)
Q Consensus 888 ~~ 889 (1050)
-.
T Consensus 229 t~ 230 (242)
T COG4161 229 TE 230 (242)
T ss_pred cC
Confidence 54
No 456
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-36 Score=330.52 Aligned_cols=206 Identities=23% Similarity=0.370 Sum_probs=165.9
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCCCeeE-----------
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAV----------- 103 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~-----~~~g~~~~----------- 103 (1050)
+.|+++|++|+|+. +++|+++||++++|++++|+|+||||||||+++|+|+.+ |++|.+..
T Consensus 5 ~~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 56999999999963 469999999999999999999999999999999999864 46665421
Q ss_pred ---EeCcEEEEecCCCCCcccHHHHhccCCC---C-CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHH
Q 001580 104 ---IRGTVAYVPQVSWIFNATVRDNILFGSA---F-EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 172 (1050)
Q Consensus 104 ---~~~~i~~v~Q~~~l~~~TV~eni~~g~~---~-~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGq 172 (1050)
.+..++|++|++.++..||+||+.++.. . .. ++....++.+++.+.+. +..+....+|||||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq 154 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQ 154 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHH
Confidence 1235999999998887899999987521 1 11 12233344444432111 12345567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChh
Q 001580 173 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFE 251 (1050)
Q Consensus 173 rqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 251 (1050)
||||+|||||+.+|++|||||||++||+.++.++++.+.+.. +++|+|++||+++++.. ||++++|++|++++.|+++
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 233 (253)
T PRK14242 155 QQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTE 233 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999887663 47899999999999865 7999999999999999988
Q ss_pred hhhcC
Q 001580 252 DLSNN 256 (1050)
Q Consensus 252 ~l~~~ 256 (1050)
++.+.
T Consensus 234 ~~~~~ 238 (253)
T PRK14242 234 QIFTR 238 (253)
T ss_pred HHHcC
Confidence 77543
No 457
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.5e-36 Score=332.18 Aligned_cols=201 Identities=30% Similarity=0.445 Sum_probs=165.1
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-----------------
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------- 103 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------------- 103 (1050)
.++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 5899999999963 47999999999999999999999999999999999999998876421
Q ss_pred ---EeCcEEEEecCCCCC-cccHHHHhccCC----CCCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHH
Q 001580 104 ---IRGTVAYVPQVSWIF-NATVRDNILFGS----AFEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 171 (1050)
Q Consensus 104 ---~~~~i~~v~Q~~~l~-~~TV~eni~~g~----~~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGG 171 (1050)
.+..++|++|++.++ ..||+||+.++. ..... +....++..++... ......+||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G 148 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGK-----------ETSYPRRLSGG 148 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcch-----------hhCChhhCChH
Confidence 123599999999887 579999997642 11111 12222333333221 23455789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccCh
Q 001580 172 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTF 250 (1050)
Q Consensus 172 qrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 250 (1050)
|||||+|||||+.+|++|||||||++||+.+++++++.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+.
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~ 228 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPA 228 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999877665568999999999999876 799999999999999998
Q ss_pred hhhhc
Q 001580 251 EDLSN 255 (1050)
Q Consensus 251 ~~l~~ 255 (1050)
+++..
T Consensus 229 ~~~~~ 233 (250)
T PRK11264 229 KALFA 233 (250)
T ss_pred HHHhc
Confidence 88754
No 458
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=329.21 Aligned_cols=207 Identities=22% Similarity=0.288 Sum_probs=168.8
Q ss_pred cEEEEEEEEEeCCC------------------CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEE
Q 001580 665 SIKFEDVVLRYRPE------------------LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILI 726 (1050)
Q Consensus 665 ~i~~~~v~~~y~~~------------------~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~ 726 (1050)
.|+++||++.|... ..++|+++||+|++||++||+||||||||||+++|+|+++|++|+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~ 83 (264)
T PRK13546 4 SVNIKNVTKEYRIYRTNKERMKDALIPKHKNKTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDR 83 (264)
T ss_pred eEEEeeeEEEEEecccchHHHHHHhhhhccCCceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEE
Confidence 47888888877431 135899999999999999999999999999999999999999999999
Q ss_pred CCeecCCCChHHHhhheEEEcCCccccc-ccHHHhcccC---CCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCC
Q 001580 727 DGFDIAKFGLMDLRKILGIIPQSPVLFS-GTVRFNLDPF---SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGEN 802 (1050)
Q Consensus 727 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~tv~~nl~~~---~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~ 802 (1050)
+|. +++++|++.++. .|+++|+.+. .....++..+.. .+.++. .+++..+......
T Consensus 84 ~g~-------------~~~~~~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~l~~--~~l~~~~~~~~~~ 143 (264)
T PRK13546 84 NGE-------------VSVIAISAGLSGQLTGIENIEFKMLCMGFKRKEIKAMT-----PKIIEF--SELGEFIYQPVKK 143 (264)
T ss_pred CCE-------------EeEEecccCCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHH--cCCchhhcCCccc
Confidence 984 456778876664 4999998642 112233322211 122222 2455556666788
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEE
Q 001580 803 FSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLE 880 (1050)
Q Consensus 803 LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~ 880 (1050)
||||||||++||||++.+|+||||||||++||+.+.+.+.+.|.++. .++|+|++||+++.+.. ||+|++|++|++++
T Consensus 144 LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~~ 223 (264)
T PRK13546 144 YSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFKEQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLKD 223 (264)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998864 47899999999999877 99999999999999
Q ss_pred ecChhHHhhcC
Q 001580 881 YDTPEELLSNE 891 (1050)
Q Consensus 881 ~g~~~el~~~~ 891 (1050)
.|++++++...
T Consensus 224 ~g~~~~~~~~~ 234 (264)
T PRK13546 224 YGELDDVLPKY 234 (264)
T ss_pred eCCHHHHHHHh
Confidence 99999998754
No 459
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.6e-36 Score=323.92 Aligned_cols=189 Identities=25% Similarity=0.442 Sum_probs=156.3
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------EeC
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IRG 106 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~~~ 106 (1050)
|+++|++++|+. ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+.
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 357999999999999999999999999999999999999999886532 123
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
.++|++|++.++ ..||.||+.++.. ... +++...++..++....+. ...+|||||||||+|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADA-----------FPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHHH
Confidence 599999999887 5799999987521 111 233344555555443332 235899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCe
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGM 243 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~ 243 (1050)
||||+.+|+++||||||++||+.++.++.+.+.....+|+|+|++||+++++.. ||++++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999887765568999999999999886 79999999884
No 460
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.6e-36 Score=366.00 Aligned_cols=215 Identities=27% Similarity=0.434 Sum_probs=172.4
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccc--cCCccEEEEC----------------
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIV--ELERGRILID---------------- 727 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~--~p~~G~i~~~---------------- 727 (1050)
|+++|++++|++ .++|+|+||+|.+||++||+||||||||||+++|+|++ +|++|+|.++
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~ 78 (520)
T TIGR03269 1 IEVKNLTKKFDG--KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKV 78 (520)
T ss_pred CEEEEEEEEECC--eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccc
Confidence 478999999964 36999999999999999999999999999999999996 7999999997
Q ss_pred -------CeecC-------CCC---hHHHhhheEEEcCC-cccccc-cHHHhcccCC---CCCHHHHHHHHHHhcHHHHH
Q 001580 728 -------GFDIA-------KFG---LMDLRKILGIIPQS-PVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAI 785 (1050)
Q Consensus 728 -------g~~i~-------~~~---~~~~r~~i~~v~Q~-~~lf~~-tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i 785 (1050)
|.++. ..+ ...+|+.++|+||+ +.+|.. |+++|+.+.. .....+.. ..+.+.+
T Consensus 79 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l 153 (520)
T TIGR03269 79 GEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDLI 153 (520)
T ss_pred ccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHH
Confidence 33221 111 12357789999998 567764 9999986421 11111111 1123333
Q ss_pred HHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchh
Q 001580 786 RRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNT 863 (1050)
Q Consensus 786 ~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~ 863 (1050)
+.+ |++........+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|||+||||++.
T Consensus 154 ~~~--gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~ 231 (520)
T TIGR03269 154 EMV--QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEV 231 (520)
T ss_pred HHc--CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHH
Confidence 332 44444555667899999999999999999999999999999999999999999999864 37899999999999
Q ss_pred hhh-cCEEEEEeCCEEEEecChhHHhh
Q 001580 864 IID-CDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 864 ~~~-~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
+.. ||+|++|++|+++..|+++++..
T Consensus 232 ~~~~~d~i~~l~~G~i~~~g~~~~~~~ 258 (520)
T TIGR03269 232 IEDLSDKAIWLENGEIKEEGTPDEVVA 258 (520)
T ss_pred HHHhcCEEEEEeCCEEeeecCHHHHHH
Confidence 976 99999999999999999998865
No 461
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.1e-36 Score=328.89 Aligned_cols=204 Identities=27% Similarity=0.412 Sum_probs=165.0
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCC-----CCCeeE------------
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPV-----SDASAV------------ 103 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~-----~g~~~~------------ 103 (1050)
+|+++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|.+..
T Consensus 1 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~ 77 (247)
T TIGR00972 1 AIEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDV 77 (247)
T ss_pred CEEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccch
Confidence 3789999999963 46999999999999999999999999999999999999987 775432
Q ss_pred --EeCcEEEEecCCCCCcccHHHHhccCCCC----CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHH
Q 001580 104 --IRGTVAYVPQVSWIFNATVRDNILFGSAF----EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 173 (1050)
Q Consensus 104 --~~~~i~~v~Q~~~l~~~TV~eni~~g~~~----~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqr 173 (1050)
.+..++|+||++.++..||+||+.++... .. ++....++..++...+. ........+||||||
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 150 (247)
T TIGR00972 78 VELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQ 150 (247)
T ss_pred HHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHH
Confidence 12359999999988779999999875211 11 12233344444431110 123345578999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 174 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 174 qRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
|||+|||||+.+|+++||||||++||+.++..+++.+.+... ++|+|++||+++++.. ||++++|++|++++.|++++
T Consensus 151 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 229 (247)
T TIGR00972 151 QRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQ 229 (247)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999998776544 4899999999998865 79999999999999999887
Q ss_pred hhc
Q 001580 253 LSN 255 (1050)
Q Consensus 253 l~~ 255 (1050)
+..
T Consensus 230 ~~~ 232 (247)
T TIGR00972 230 IFT 232 (247)
T ss_pred HHh
Confidence 754
No 462
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.4e-36 Score=333.52 Aligned_cols=203 Identities=23% Similarity=0.348 Sum_probs=166.1
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------E
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------I 104 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~ 104 (1050)
+.|+++|++|.|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+.. .
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (269)
T PRK11831 6 NLVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTV 82 (269)
T ss_pred ceEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHH
Confidence 3699999999996 357999999999999999999999999999999999999998876432 1
Q ss_pred eCcEEEEecCCCCCc-ccHHHHhccCCC----CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHH
Q 001580 105 RGTVAYVPQVSWIFN-ATVRDNILFGSA----FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQR 175 (1050)
Q Consensus 105 ~~~i~~v~Q~~~l~~-~TV~eni~~g~~----~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqR 175 (1050)
+..++|++|++.++. .||.||+.++.. .+.. +....++..++.... .....+||||||||
T Consensus 83 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGq~qr 151 (269)
T PRK11831 83 RKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAA-----------KLMPSELSGGMARR 151 (269)
T ss_pred hhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHH
Confidence 235999999998874 699999976421 1211 122233444443222 23346899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhh
Q 001580 176 VSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 253 (1050)
Q Consensus 176 v~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 253 (1050)
|+|||||+.+|+++||||||++||+.+++.+.+.+.+... .|+|+|+||||++++.. ||++++|++|++++.|+++++
T Consensus 152 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (269)
T PRK11831 152 AALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQAL 231 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999998876544 38999999999999876 799999999999999999887
Q ss_pred hcC
Q 001580 254 SNN 256 (1050)
Q Consensus 254 ~~~ 256 (1050)
.+.
T Consensus 232 ~~~ 234 (269)
T PRK11831 232 QAN 234 (269)
T ss_pred hcC
Confidence 654
No 463
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=2.5e-36 Score=324.76 Aligned_cols=201 Identities=24% Similarity=0.353 Sum_probs=159.9
Q ss_pred EEEEEEEEEeCC----C-CCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEEC--Ce--ecCCCCh
Q 001580 666 IKFEDVVLRYRP----E-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILID--GF--DIAKFGL 736 (1050)
Q Consensus 666 i~~~~v~~~y~~----~-~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~--g~--~i~~~~~ 736 (1050)
++++|++++|+. + ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++ |. ++...+.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999953 1 1369999999999999999999999999999999999999999999998 42 6655554
Q ss_pred HH---H-hhheEEEcCCcccccc-cHHHhcccCC---CCCHHHHHHHHHHhcHHHHHHHccCCcchh-hhcCCCCCChhH
Q 001580 737 MD---L-RKILGIIPQSPVLFSG-TVRFNLDPFS---EHSDADLWEALERAHLKDAIRRNSLGLDAQ-VSEAGENFSVGQ 807 (1050)
Q Consensus 737 ~~---~-r~~i~~v~Q~~~lf~~-tv~~nl~~~~---~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~-v~~~~~~LSgGq 807 (1050)
.. + ++.++|+||++.++.. |+++|+.+.. .....+.. ..+.++++.+ |+... ....+.+|||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G~ 154 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAAR-----ARARELLARL--NIPERLWHLPPATFSGGE 154 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCchhhhhCCcccCCHHH
Confidence 43 2 4579999999988765 9999986421 11111111 1122334432 33322 244567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEE
Q 001580 808 RQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLL 873 (1050)
Q Consensus 808 ~qrl~lArall~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl 873 (1050)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+++.+
T Consensus 155 ~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 155 QQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 999999999999999999999999999999999999999864 47899999999999875 9999876
No 464
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.5e-36 Score=327.11 Aligned_cols=201 Identities=29% Similarity=0.445 Sum_probs=165.4
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE--------------EeCc
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------IRGT 107 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------~~~~ 107 (1050)
++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|.++|++|.+.. .+..
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 78999999996 257999999999999999999999999999999999999999886432 1235
Q ss_pred EEEEecCCCCC-cccHHHHhccCCC----CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 108 VAYVPQVSWIF-NATVRDNILFGSA----FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 108 i~~v~Q~~~l~-~~TV~eni~~g~~----~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
++|++|++.++ ..||+||+.++.. .... ++.+.++..++...+ .....+|||||||||+|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERA-----------HHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHH-----------hcChhhcCHHHHHHHHH
Confidence 99999999876 5799999987521 1111 122333333443322 33446899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
||||+.+|+++||||||++||+.++.++.+.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+++++.+.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999999877665568999999999999975 799999999999999998877543
No 465
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-36 Score=321.39 Aligned_cols=192 Identities=23% Similarity=0.401 Sum_probs=157.7
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE--------eCcEEEEec
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------RGTVAYVPQ 113 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~--------~~~i~~v~Q 113 (1050)
++++|+++.|+ ++++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+..- +..++|++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEecc
Confidence 47899999996 3569999999999999999999999999999999999999998765431 235999999
Q ss_pred CCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 001580 114 VSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN 185 (1050)
Q Consensus 114 ~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~ 185 (1050)
++.++ ..||+||+.++.. ... ++..+.++..++.... .....+|||||||||+|||||+.+
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYA-----------NKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHH-----------hCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99887 5799999976421 111 1223334444443322 234468999999999999999999
Q ss_pred CCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeec
Q 001580 186 SDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEE 247 (1050)
Q Consensus 186 ~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~ 247 (1050)
|+++||||||++||+.+++++.+.+.+...+|+|+|++||+++++.. +|++++|++|++++.
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~ 209 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLY 209 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEec
Confidence 99999999999999999999999887665568999999999999865 799999999998764
No 466
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-36 Score=331.60 Aligned_cols=206 Identities=30% Similarity=0.442 Sum_probs=169.4
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCc
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 107 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~ 107 (1050)
+.|+++|+++.|+. +++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. ++..
T Consensus 6 ~~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 6 VMIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred eEEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 46999999999963 2457999999999999999999999999999999999999999876432 1345
Q ss_pred EEEEecCCC--CCcccHHHHhccCCC---CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 108 VAYVPQVSW--IFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 108 i~~v~Q~~~--l~~~TV~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
++|++|+|. ++..||+||+.++.. .... +..+.++..++.+.++. ...+||||||||++|
T Consensus 85 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 153 (271)
T PRK13632 85 IGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDK-----------EPQNLSGGQKQRVAI 153 (271)
T ss_pred eEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------CcccCCHHHHHHHHH
Confidence 999999984 457899999987521 2222 12334455555544433 346899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcCh
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 257 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 257 (1050)
||||+.+|++|||||||++||+.+++.+++.+.+...+ ++|+|++||+++++..||++++|++|++++.|+.+++....
T Consensus 154 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 233 (271)
T PRK13632 154 ASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNNK 233 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcCH
Confidence 99999999999999999999999999999988776544 58999999999998878999999999999999888776543
No 467
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.2e-36 Score=339.89 Aligned_cols=208 Identities=22% Similarity=0.330 Sum_probs=168.9
Q ss_pred CCcEEEEeEEEEeCCCC----------CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-----
Q 001580 39 LPAISIRNGYFSWDSKA----------ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----- 103 (1050)
Q Consensus 39 ~~~i~~~~~~f~~~~~~----------~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----- 103 (1050)
.+.|+++|++++|+... ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++|.+..
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 35699999999997421 246999999999999999999999999999999999999998876532
Q ss_pred ----------EeCcEEEEecCC--CCC-cccHHHHhccCC-----CCCHH----HHHHHHHHhCcHHHHhcCCCCCcccc
Q 001580 104 ----------IRGTVAYVPQVS--WIF-NATVRDNILFGS-----AFEPA----RYEKAIDVTSLQHDLDLLPGGDVTEI 161 (1050)
Q Consensus 104 ----------~~~~i~~v~Q~~--~l~-~~TV~eni~~g~-----~~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~v 161 (1050)
.++.|+||+|+| .++ ..||.|||.++. ..... +....++..++... ..
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~----------~~ 155 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPN----------LI 155 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChH----------Hh
Confidence 134699999998 355 689999997531 12222 22233444444211 12
Q ss_pred cCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEE
Q 001580 162 GERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILV 239 (1050)
Q Consensus 162 g~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l 239 (1050)
.....+|||||||||+|||||+.+|++||+||||++||+.++..+.+.+.+... .|.|+|+||||+.++.. ||+|++|
T Consensus 156 ~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl 235 (331)
T PRK15079 156 NRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVM 235 (331)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 344578999999999999999999999999999999999999999998877654 48999999999999976 7999999
Q ss_pred cCCeEeeccChhhhhcC
Q 001580 240 HEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 240 ~~G~i~~~g~~~~l~~~ 256 (1050)
.+|++++.|+.+++..+
T Consensus 236 ~~G~ive~g~~~~i~~~ 252 (331)
T PRK15079 236 YLGHAVELGTYDEVYHN 252 (331)
T ss_pred ECCEEEEEcCHHHHHcC
Confidence 99999999999998765
No 468
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-36 Score=324.66 Aligned_cols=203 Identities=26% Similarity=0.405 Sum_probs=165.0
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRG 106 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~ 106 (1050)
+.|+++|+++.|+. +++|+++||++++||+++|+|+||||||||+++|+|+++|++|.+.. .+.
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 80 (237)
T PRK11614 4 VMLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMRE 80 (237)
T ss_pred cEEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHh
Confidence 46999999999963 57999999999999999999999999999999999999999886432 123
Q ss_pred cEEEEecCCCCCc-ccHHHHhccCCCC-CHHHHH----HHHHHh-CcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHH
Q 001580 107 TVAYVPQVSWIFN-ATVRDNILFGSAF-EPARYE----KAIDVT-SLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMA 179 (1050)
Q Consensus 107 ~i~~v~Q~~~l~~-~TV~eni~~g~~~-~~~~~~----~~~~~~-~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LA 179 (1050)
.++|++|++.++. .||.||+.++... ...... ..++.. .+.. .......+||||||||++||
T Consensus 81 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-----------~~~~~~~~LS~G~~qrl~la 149 (237)
T PRK11614 81 AVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHE-----------RRIQRAGTMSGGEQQMLAIG 149 (237)
T ss_pred CEEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHH-----------HHhCchhhCCHHHHHHHHHH
Confidence 5999999998874 6999999875321 111111 111211 1111 12234568999999999999
Q ss_pred HHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 180 RAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 180 raL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
|||+.+|+++||||||++||+.+++.+++.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+++++...
T Consensus 150 ~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 150 RALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred HHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999999887765568999999999998765 799999999999999999887644
No 469
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-36 Score=331.23 Aligned_cols=205 Identities=28% Similarity=0.430 Sum_probs=169.1
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCc
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 107 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~ 107 (1050)
..++++|++++|+. .+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|.+.. .+..
T Consensus 2 ~~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 79 (277)
T PRK13652 2 HLIETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKF 79 (277)
T ss_pred ceEEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 35889999999963 246999999999999999999999999999999999999999886532 1124
Q ss_pred EEEEecCCC--CCcccHHHHhccCCC---CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 108 VAYVPQVSW--IFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 108 i~~v~Q~~~--l~~~TV~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
++||+|++. ++..||.||+.++.. .+.+ ++...++..++...++. ....||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrl~l 148 (277)
T PRK13652 80 VGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDR-----------VPHHLSGGEKKRVAI 148 (277)
T ss_pred eEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcC-----------CcccCCHHHHHHHHH
Confidence 999999984 567899999986531 2222 23344555555544333 335899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhh-hcCEEEEEcCCeEeeccChhhhhcC
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLS-QVDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
||||+.+|+++||||||++||+.+++.+++.+.+...+ |.|+|++||+++++. .|||+++|++|++++.|+++++.+.
T Consensus 149 araL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 149 AGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999988776544 899999999999986 5799999999999999999888755
Q ss_pred h
Q 001580 257 G 257 (1050)
Q Consensus 257 ~ 257 (1050)
.
T Consensus 229 ~ 229 (277)
T PRK13652 229 P 229 (277)
T ss_pred H
Confidence 3
No 470
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.5e-36 Score=322.81 Aligned_cols=199 Identities=27% Similarity=0.502 Sum_probs=163.0
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-----------EeCcEEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVAY 110 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-----------~~~~i~~ 110 (1050)
|+++|+++.|+.. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|.+.. .+..++|
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEE
Confidence 4789999999632 257999999999999999999999999999999999999999886532 1235999
Q ss_pred EecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Q 001580 111 VPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAV 182 (1050)
Q Consensus 111 v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL 182 (1050)
++|++.++ ..||+||+.++.. ... +++...++..++.+..+ ....+|||||||||+|||||
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKAN-----------KRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHh-----------ChhhhCCHHHHHHHHHHHHH
Confidence 99999887 6899999986421 111 22334445555543332 23468999999999999999
Q ss_pred ccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhh
Q 001580 183 YSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 253 (1050)
Q Consensus 183 ~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 253 (1050)
+.+|+++||||||++||+.+.+++.+.+.+... ++|+|++||+++++.. ||++++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 999999999999999999999999998776543 5899999999999875 799999999999998887654
No 471
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-36 Score=325.38 Aligned_cols=201 Identities=21% Similarity=0.374 Sum_probs=164.7
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeCc
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 107 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~~ 107 (1050)
.++++|++|.|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 5899999999963 57999999999999999999999999999999999999999886532 1245
Q ss_pred EEEEecCCCCC-cccHHHHhccCCCC----CHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 108 VAYVPQVSWIF-NATVRDNILFGSAF----EPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 108 i~~v~Q~~~l~-~~TV~eni~~g~~~----~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
++|++|++.++ ..||.||+.++... +.. +....++..++.. .......+|||||||||+|
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~l 148 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEH-----------LRDSMGQSLSGGERRRVEI 148 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHH-----------HhhcchhhCCHHHHHHHHH
Confidence 99999999877 47999999875321 111 1222223323221 2334557899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
||||+.+|++|||||||++||+.+++++++.+.....+|+|+|++||+++++.. ||++++|++|++++.|+++++..
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 149 ARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 999999999999999999999999999998776655568999999999988765 79999999999999999887754
No 472
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-36 Score=333.76 Aligned_cols=206 Identities=24% Similarity=0.424 Sum_probs=166.1
Q ss_pred cEEEEeEEEEeCCCC--CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------
Q 001580 41 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 103 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------- 103 (1050)
.|+++|++|+|+... .+++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 378999999997421 146999999999999999999999999999999999999999876532
Q ss_pred -EeCcEEEEecCC--CCCcccHHHHhccCCC---CCHHH----HHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHH
Q 001580 104 -IRGTVAYVPQVS--WIFNATVRDNILFGSA---FEPAR----YEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 173 (1050)
Q Consensus 104 -~~~~i~~v~Q~~--~l~~~TV~eni~~g~~---~~~~~----~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqr 173 (1050)
.+..|+|++|++ .++..||+||+.++.. ..... ....++..++... .......+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~~ 151 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQM 151 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHH
Confidence 123599999997 4677899999987521 12221 1222333333211 12344578999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 174 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 174 qRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
|||+|||||+.+|++|||||||++||+.+++++++.+.+....|+|+|++||+++++.. ||++++|++|++++.|++++
T Consensus 152 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (280)
T PRK13649 152 RRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKD 231 (280)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999887665568999999999999865 79999999999999999888
Q ss_pred hhcC
Q 001580 253 LSNN 256 (1050)
Q Consensus 253 l~~~ 256 (1050)
+...
T Consensus 232 ~~~~ 235 (280)
T PRK13649 232 IFQD 235 (280)
T ss_pred HhcC
Confidence 7654
No 473
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-36 Score=331.61 Aligned_cols=202 Identities=24% Similarity=0.382 Sum_probs=165.2
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE--------------EeC
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------IRG 106 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------~~~ 106 (1050)
+|+++|++++|+ ++++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+.
T Consensus 1 ml~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 77 (271)
T PRK13638 1 MLATSDLWFRYQ---DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQ 77 (271)
T ss_pred CeEEEEEEEEcC---CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHh
Confidence 378999999996 357999999999999999999999999999999999999999886532 123
Q ss_pred cEEEEecCCC--CCcccHHHHhccCC---CCCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHH
Q 001580 107 TVAYVPQVSW--IFNATVRDNILFGS---AFEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 177 (1050)
Q Consensus 107 ~i~~v~Q~~~--l~~~TV~eni~~g~---~~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~ 177 (1050)
.|+|++|++. ++..|+.+|+.++. ..... +....++..++.... .....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~ 146 (271)
T PRK13638 78 QVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-----------HQPIQCLSHGQKKRVA 146 (271)
T ss_pred heEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-----------cCCchhCCHHHHHHHH
Confidence 5999999985 45678999998641 11221 122334444443322 2234689999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 178 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 178 LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
|||||+.+|+++||||||++||+.++.++++.+.+...+|.|+|++||+++++.. +|++++|++|++++.|+++++...
T Consensus 147 laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 147 IAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999887765568999999999999865 899999999999999998887654
No 474
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=319.57 Aligned_cols=207 Identities=28% Similarity=0.416 Sum_probs=176.3
Q ss_pred CcEEEEeEEEEeCCCCC---------------------CCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCC
Q 001580 40 PAISIRNGYFSWDSKAE---------------------RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVS 98 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~---------------------~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~ 98 (1050)
..|+++|+++-|++++. ..-++|+||+|++||+..|.|-||||||||++++.++++|+.
T Consensus 3 ~~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~ 82 (386)
T COG4175 3 VKIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTR 82 (386)
T ss_pred ceEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCC
Confidence 35899999999975321 125799999999999999999999999999999999999999
Q ss_pred CCeeE----------------EeCcEEEEecCCCCC-cccHHHHhccCCCC----CHH---HHHHHHHHhCcHHHHhcCC
Q 001580 99 DASAV----------------IRGTVAYVPQVSWIF-NATVRDNILFGSAF----EPA---RYEKAIDVTSLQHDLDLLP 154 (1050)
Q Consensus 99 g~~~~----------------~~~~i~~v~Q~~~l~-~~TV~eni~~g~~~----~~~---~~~~~~~~~~l~~~~~~~~ 154 (1050)
|.+.. .+.++++|+|+.-|+ ..||.||+.||.+. +.+ +..+.++..+|...-+..|
T Consensus 83 G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 83 GEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP 162 (386)
T ss_pred ceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc
Confidence 87643 234699999998875 78999999999543 123 3344566777777766666
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-
Q 001580 155 GGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ- 232 (1050)
Q Consensus 155 ~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~- 232 (1050)
.+||||+||||.|||||+.+|+|||+|||||+|||-.+..+.+.|+++.. -++|+|+||||++++-+
T Consensus 163 -----------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlri 231 (386)
T COG4175 163 -----------NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRI 231 (386)
T ss_pred -----------ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhc
Confidence 48999999999999999999999999999999999999999999987654 48999999999999766
Q ss_pred cCEEEEEcCCeEeeccChhhhhcCh
Q 001580 233 VDRIILVHEGMVKEEGTFEDLSNNG 257 (1050)
Q Consensus 233 ~d~i~~l~~G~i~~~g~~~~l~~~~ 257 (1050)
-|||.+|++|+|+..|+++|+..++
T Consensus 232 G~rIaimkdG~ivQ~Gtp~eIl~~P 256 (386)
T COG4175 232 GDRIAIMKDGEIVQVGTPEEILLNP 256 (386)
T ss_pred cceEEEecCCeEEEeCCHHHHHcCc
Confidence 4999999999999999999998764
No 475
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-36 Score=333.31 Aligned_cols=207 Identities=23% Similarity=0.383 Sum_probs=165.3
Q ss_pred cEEEEeEEEEeCCCC--CCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------
Q 001580 41 AISIRNGYFSWDSKA--ERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------- 103 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~--~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------- 103 (1050)
.|+++|++++|+.+. .+++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+..
T Consensus 6 ~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 85 (289)
T PRK13645 6 DIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKEV 85 (289)
T ss_pred eEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccccH
Confidence 489999999997432 136999999999999999999999999999999999999999876532
Q ss_pred --EeCcEEEEecCCC--CCcccHHHHhccCCC---CCHHH----HHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHH
Q 001580 104 --IRGTVAYVPQVSW--IFNATVRDNILFGSA---FEPAR----YEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQ 172 (1050)
Q Consensus 104 --~~~~i~~v~Q~~~--l~~~TV~eni~~g~~---~~~~~----~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGq 172 (1050)
.+..|+|++|++. ++..||+||+.++.. ..... ....++..++.. ...+....+|||||
T Consensus 86 ~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~----------~~~~~~~~~LS~Gq 155 (289)
T PRK13645 86 KRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPE----------DYVKRSPFELSGGQ 155 (289)
T ss_pred HHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hHhcCChhhCCHHH
Confidence 1235999999984 467799999987532 11111 112223333211 01234557899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccCh
Q 001580 173 KQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTF 250 (1050)
Q Consensus 173 rqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 250 (1050)
||||+|||||+.+|++|||||||++||+.+++.+++.+.+... .|+|+|++||+++++.. ||++++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (289)
T PRK13645 156 KRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSP 235 (289)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999998776544 48999999999998865 799999999999999998
Q ss_pred hhhhcCh
Q 001580 251 EDLSNNG 257 (1050)
Q Consensus 251 ~~l~~~~ 257 (1050)
+++.+..
T Consensus 236 ~~~~~~~ 242 (289)
T PRK13645 236 FEIFSNQ 242 (289)
T ss_pred HHHhcCH
Confidence 8876543
No 476
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.6e-36 Score=337.03 Aligned_cols=200 Identities=23% Similarity=0.431 Sum_probs=166.2
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-----------EeCcEE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-----------IRGTVA 109 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-----------~~~~i~ 109 (1050)
.++++|++++|+ ++.+|+|+||++++|+++||+||||||||||+++|+|+++|++|.+.. .+..+|
T Consensus 2 ~l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig 78 (301)
T TIGR03522 2 SIRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceE
Confidence 378999999996 356999999999999999999999999999999999999999886532 123599
Q ss_pred EEecCCCCC-cccHHHHhccCCC---CC----HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHH
Q 001580 110 YVPQVSWIF-NATVRDNILFGSA---FE----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 181 (1050)
Q Consensus 110 ~v~Q~~~l~-~~TV~eni~~g~~---~~----~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAra 181 (1050)
|+||++.++ ..||.||+.+... .. .++....++..++.+.. +....+||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQ-----------HKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHh-----------cCchhhCCHHHHHHHHHHHH
Confidence 999999887 5699999975321 11 12233344444444332 33456899999999999999
Q ss_pred HccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 182 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 182 L~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
|+++|+++||||||+|||+.+++++++.+.... +++|+|++||+++++.. ||||++|++|++++.|+.+++..
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~-~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG-KDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 999999999999999999999999999887664 47999999999999876 89999999999999999988753
No 477
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-36 Score=327.92 Aligned_cols=201 Identities=26% Similarity=0.425 Sum_probs=166.6
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE------------eCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~------------~~~i 108 (1050)
+++++|++++|+ ++++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+... +..+
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (255)
T PRK11231 2 TLRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRL 78 (255)
T ss_pred EEEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhhe
Confidence 488999999996 3579999999999999999999999999999999999999998865321 2349
Q ss_pred EEEecCCCCC-cccHHHHhccCCC-----C---C---HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHH
Q 001580 109 AYVPQVSWIF-NATVRDNILFGSA-----F---E---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 176 (1050)
Q Consensus 109 ~~v~Q~~~l~-~~TV~eni~~g~~-----~---~---~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv 176 (1050)
+|++|++.++ ..||.||+.++.. + . ..+....++..++.+..+ ....+|||||||||
T Consensus 79 ~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv 147 (255)
T PRK11231 79 ALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLAD-----------RRLTDLSGGQRQRA 147 (255)
T ss_pred EEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHc-----------CCcccCCHHHHHHH
Confidence 9999999876 4599999987621 1 1 122333444455543332 34468999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 177 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 177 ~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
+|||||+.+|++|||||||++||+.+++.+.+.+.+...+|+|+|++||+++++.. +|++++|++|+++..|+++++..
T Consensus 148 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 148 FLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 99999999999999999999999999999999887665568999999999999875 79999999999999999888754
No 478
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-36 Score=325.80 Aligned_cols=200 Identities=27% Similarity=0.433 Sum_probs=163.8
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-----------------
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----------------- 103 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----------------- 103 (1050)
.++++|++|.|+. +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|.+..
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 4789999999963 57999999999999999999999999999999999999999886532
Q ss_pred -EeCcEEEEecCCCCC-cccHHHHhccCC----CCCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHH
Q 001580 104 -IRGTVAYVPQVSWIF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQK 173 (1050)
Q Consensus 104 -~~~~i~~v~Q~~~l~-~~TV~eni~~g~----~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqr 173 (1050)
.+..|+|+||++.++ ..||.||+.++. .... .+....++..++.... +....+||||||
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~ 147 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYA-----------DRFPLHLSGGQQ 147 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHH
Confidence 123599999999887 569999996421 0111 1222233344443322 334468999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 174 QRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 174 qRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
|||+|||||+.+|+++||||||++||+.+++++.+.+.+...+|+|+|++||+++++.. +|++++|++|++++.|++++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 227 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASC 227 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999887665568999999999999875 79999999999999998877
Q ss_pred hh
Q 001580 253 LS 254 (1050)
Q Consensus 253 l~ 254 (1050)
+.
T Consensus 228 ~~ 229 (242)
T PRK11124 228 FT 229 (242)
T ss_pred hc
Confidence 54
No 479
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=331.46 Aligned_cols=203 Identities=25% Similarity=0.438 Sum_probs=166.9
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE--------------EeC
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV--------------IRG 106 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~--------------~~~ 106 (1050)
+|+++|++|+|+. .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|.+.. .+.
T Consensus 1 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (275)
T PRK13639 1 ILETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRK 78 (275)
T ss_pred CEEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHh
Confidence 3789999999962 346999999999999999999999999999999999999998875532 123
Q ss_pred cEEEEecCC--CCCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHH
Q 001580 107 TVAYVPQVS--WIFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVS 177 (1050)
Q Consensus 107 ~i~~v~Q~~--~l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~ 177 (1050)
.|+|++|++ .++..||.||+.++.. ... ++....++..++....+ ....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LS~Gq~qrv~ 147 (275)
T PRK13639 79 TVGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFEN-----------KPPHHLSGGQKKRVA 147 (275)
T ss_pred heEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhc-----------CChhhCCHHHHHHHH
Confidence 599999997 4577899999987521 111 12333444445433222 234689999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhcC
Q 001580 178 MARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 178 LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
|||||+.+|+++||||||++||+.++.++++.+.+...+|.|+|++||+++++.. ||++++|++|++++.|+++++...
T Consensus 148 laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 148 IAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999887765568999999999999874 899999999999999999887654
No 480
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.4e-36 Score=321.50 Aligned_cols=190 Identities=26% Similarity=0.430 Sum_probs=156.3
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE---------------EeC
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV---------------IRG 106 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~---------------~~~ 106 (1050)
++++|++++|+. .+++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPN--GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 478999999963 257999999999999999999999999999999999999999876532 123
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
.++|++|++.++ ..|++||+.++.. ... ++....++..++.+..+. ...+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRA-----------LPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------ChhhcCHHHHHHHHH
Confidence 599999999887 4799999987521 111 123344555555443332 335899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeE
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMV 244 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i 244 (1050)
||||+.+|+++||||||++||+.+++++.+.+.+...+|+|+|++||+++++.. ||++++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999887765568999999999999986 799999999863
No 481
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-36 Score=328.81 Aligned_cols=210 Identities=19% Similarity=0.299 Sum_probs=166.0
Q ss_pred CCCCCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCCCeeE-------
Q 001580 36 TSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAV------- 103 (1050)
Q Consensus 36 ~~~~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~-----~~~g~~~~------- 103 (1050)
+++.+.|+++|++|+|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+.+ |++|.+..
T Consensus 16 ~~~~~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~ 92 (268)
T PRK14248 16 EAKEHILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILD 92 (268)
T ss_pred CCCCceEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccc
Confidence 34445799999999996 3579999999999999999999999999999999999864 56775422
Q ss_pred -------EeCcEEEEecCCCCCcccHHHHhccCCCC----CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCC
Q 001580 104 -------IRGTVAYVPQVSWIFNATVRDNILFGSAF----EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNI 168 (1050)
Q Consensus 104 -------~~~~i~~v~Q~~~l~~~TV~eni~~g~~~----~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~L 168 (1050)
.+..++|++|++.++..||+||+.++... .. +.....++..++...+ ....+....+|
T Consensus 93 ~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~L 165 (268)
T PRK14248 93 SNINVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSL 165 (268)
T ss_pred ccccHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccC
Confidence 12359999999998877999999875211 11 1112222333322111 01234556789
Q ss_pred CHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeec
Q 001580 169 SGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEE 247 (1050)
Q Consensus 169 SGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~ 247 (1050)
|||||||++|||||+.+|++|||||||++||+.+++++.+.+.+.. +++|+|++||+++++.. ||++++|++|++++.
T Consensus 166 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~ 244 (268)
T PRK14248 166 SGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELK-EEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEY 244 (268)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999877654 36899999999998865 799999999999999
Q ss_pred cChhhhhcC
Q 001580 248 GTFEDLSNN 256 (1050)
Q Consensus 248 g~~~~l~~~ 256 (1050)
|+++++..+
T Consensus 245 ~~~~~~~~~ 253 (268)
T PRK14248 245 DQTEQIFTS 253 (268)
T ss_pred CCHHHHHhC
Confidence 998877543
No 482
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-36 Score=329.03 Aligned_cols=203 Identities=27% Similarity=0.386 Sum_probs=167.8
Q ss_pred CCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE------------eC
Q 001580 39 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI------------RG 106 (1050)
Q Consensus 39 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~------------~~ 106 (1050)
.+.|+++|++|.|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+... +.
T Consensus 9 ~~~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (265)
T PRK10575 9 DTTFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFAR 85 (265)
T ss_pred CceEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhh
Confidence 356999999999963 479999999999999999999999999999999999999998865321 23
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCC--------CC---HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHH
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSA--------FE---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQ 174 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~--------~~---~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrq 174 (1050)
.++|++|++.++ ..||.||+.++.. .. ..+....++.+++.+.++.. ..+|||||||
T Consensus 86 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~q 154 (265)
T PRK10575 86 KVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-----------VDSLSGGERQ 154 (265)
T ss_pred heEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----------cccCCHHHHH
Confidence 599999998765 5699999987531 01 12334455556665444333 3589999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 175 RVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 175 Rv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
||+|||||+.+|+||||||||++||+.+++.+.+.+..... .|.|+|++||+++++.. ||++++|++|++++.|+.++
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~ 234 (265)
T PRK10575 155 RAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAE 234 (265)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHH
Confidence 99999999999999999999999999999999998876544 48999999999999865 79999999999999998887
Q ss_pred hhc
Q 001580 253 LSN 255 (1050)
Q Consensus 253 l~~ 255 (1050)
+..
T Consensus 235 ~~~ 237 (265)
T PRK10575 235 LMR 237 (265)
T ss_pred hcC
Confidence 754
No 483
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-36 Score=344.52 Aligned_cols=205 Identities=26% Similarity=0.395 Sum_probs=168.5
Q ss_pred cEEEEeEEEEeCCCCC---------------------CCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCC
Q 001580 41 AISIRNGYFSWDSKAE---------------------RPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSD 99 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~---------------------~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g 99 (1050)
.|+++|+++.|+..+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 5888888888864321 1379999999999999999999999999999999999999988
Q ss_pred CeeEE----------------eCcEEEEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCC
Q 001580 100 ASAVI----------------RGTVAYVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPG 155 (1050)
Q Consensus 100 ~~~~~----------------~~~i~~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~ 155 (1050)
.+..- +..+|||+|++.++ ..||+||+.++.. ... ++....++..++.+..+.
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~--- 160 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS--- 160 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhc---
Confidence 65320 23699999999887 5799999987632 121 223344555555444333
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-c
Q 001580 156 GDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-V 233 (1050)
Q Consensus 156 g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~ 233 (1050)
...+|||||||||+|||||+.+|++|||||||++||+.+++.+++.+.+... .|+|+|+||||++++.. +
T Consensus 161 --------~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~ 232 (400)
T PRK10070 161 --------YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIG 232 (400)
T ss_pred --------CcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhC
Confidence 3358999999999999999999999999999999999999999998877643 58999999999999865 7
Q ss_pred CEEEEEcCCeEeeccChhhhhcC
Q 001580 234 DRIILVHEGMVKEEGTFEDLSNN 256 (1050)
Q Consensus 234 d~i~~l~~G~i~~~g~~~~l~~~ 256 (1050)
|+|++|++|++++.|+++++...
T Consensus 233 Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 233 DRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CEEEEEECCEEEecCCHHHHHhC
Confidence 99999999999999999888654
No 484
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-37 Score=300.83 Aligned_cols=212 Identities=29% Similarity=0.425 Sum_probs=186.0
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
|+++||+++|+.. .+++++|++|++|.+++|+||||||||||+.++.|++++++|+|.++|.++...+...+.+.+++
T Consensus 2 I~i~nv~K~y~~~--~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~lSI 79 (252)
T COG4604 2 ITIENVSKSYGTK--VVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKKLSI 79 (252)
T ss_pred eeehhhhHhhCCE--EeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHHHHH
Confidence 6889999999754 79999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCcccccc-cHHHhcccCC------CCCH---HHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHH
Q 001580 746 IPQSPVLFSG-TVRFNLDPFS------EHSD---ADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~------~~~~---~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lAr 815 (1050)
+-|+..+-.. ||++-+.|++ ..+. .-+.++++-.++.+.-.+ .-.+||||||||.-+|.
T Consensus 80 LkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~dr-----------yLd~LSGGQrQRAfIAM 148 (252)
T COG4604 80 LKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLSDR-----------YLDELSGGQRQRAFIAM 148 (252)
T ss_pred HHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccchHHH-----------hHHhcccchhhhhhhhe
Confidence 9999987654 9998766542 1121 225666666555544333 23469999999999999
Q ss_pred HHccCCCEEEEeccCcCCCHHHHHHHHHHHHHHcC--CcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFK--SCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 816 all~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
.+.++.+.++||||.++||......+++.|+++.. ++|+++|-||..++.. +|+|+.|++|+++..|+|+|+++.
T Consensus 149 VlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv~~G~~~eii~~ 226 (252)
T COG4604 149 VLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVVKQGSPDEIIQP 226 (252)
T ss_pred eeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEEecCCHHHhcCH
Confidence 99999999999999999999999999999998664 7999999999999987 999999999999999999999864
No 485
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-36 Score=326.58 Aligned_cols=203 Identities=27% Similarity=0.429 Sum_probs=163.7
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcEE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVA 109 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~ 109 (1050)
++++|++|+|+.. +++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999731 56999999999999999999999999999999999999999876532 123589
Q ss_pred EEecCCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHH
Q 001580 110 YVPQVSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 181 (1050)
Q Consensus 110 ~v~Q~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAra 181 (1050)
|++|++.++ ..||+||+.++.. .+. ++..+.++..++.. .......+.+|||||||||+||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 999999887 5799999987521 111 12222333333321 001234457899999999999999
Q ss_pred HccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 182 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 182 L~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
|+.+|+++||||||++||+.++.++.+.+.+... +|+|+|++||+++++.. +|++++|++|++++.|+++++..
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999999999998877654 48999999999998765 79999999999999998877643
No 486
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-36 Score=326.88 Aligned_cols=203 Identities=22% Similarity=0.373 Sum_probs=165.3
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRG 106 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~ 106 (1050)
..++++|+++.|+ ++++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (255)
T PRK11300 4 PLLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARM 80 (255)
T ss_pred ceEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhc
Confidence 3699999999996 357999999999999999999999999999999999999999886432 112
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCCC----------------C-H-----HHHHHHHHHhCcHHHHhcCCCCCcccccC
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSAF----------------E-P-----ARYEKAIDVTSLQHDLDLLPGGDVTEIGE 163 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~~----------------~-~-----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~ 163 (1050)
.++|++|++.++ ..||+||+.++... . . .+....++..++.. ..+.
T Consensus 81 ~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~ 149 (255)
T PRK11300 81 GVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLE-----------HANR 149 (255)
T ss_pred CeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhh-----------hhhC
Confidence 489999999887 46999999875210 0 0 01111222222221 2345
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccC-CcEEEEeccCcchhhh-cCEEEEEcC
Q 001580 164 RGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELS-GKTRVLVTNQLHFLSQ-VDRIILVHE 241 (1050)
Q Consensus 164 ~g~~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~-g~t~ilvtH~~~~l~~-~d~i~~l~~ 241 (1050)
...+||||||||++|||||+.+|++|||||||++||+.+++.+++.+.+...+ |.|+|++||+++++.. ||++++|++
T Consensus 150 ~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 150 QAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 56789999999999999999999999999999999999999999988776544 8999999999999865 899999999
Q ss_pred CeEeeccChhhhhcC
Q 001580 242 GMVKEEGTFEDLSNN 256 (1050)
Q Consensus 242 G~i~~~g~~~~l~~~ 256 (1050)
|++++.|+.+++...
T Consensus 230 g~i~~~~~~~~~~~~ 244 (255)
T PRK11300 230 GTPLANGTPEEIRNN 244 (255)
T ss_pred CeEEecCCHHHHhhC
Confidence 999999998876543
No 487
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-36 Score=326.73 Aligned_cols=204 Identities=20% Similarity=0.331 Sum_probs=166.1
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCC---CCCCCeeE------------Ee
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP---PVSDASAV------------IR 105 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~---~~~g~~~~------------~~ 105 (1050)
.|+++|+++.|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++ |++|.+.. .+
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 4789999999963 579999999999999999999999999999999999974 57775432 12
Q ss_pred CcEEEEecCCCCCcccHHHHhccCCCC-----C-H---HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHH
Q 001580 106 GTVAYVPQVSWIFNATVRDNILFGSAF-----E-P---ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRV 176 (1050)
Q Consensus 106 ~~i~~v~Q~~~l~~~TV~eni~~g~~~-----~-~---~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv 176 (1050)
..++|+||++.++..||+||+.++... . . ++....++..++...+.. .....+.+|||||||||
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 359999999998888999999875211 1 1 122334455555322211 23445678999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhhhc
Q 001580 177 SMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDLSN 255 (1050)
Q Consensus 177 ~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 255 (1050)
+|||||+.+|+++||||||++||+.++.++.+.+.+.. +++|+|++||+++++.. +|++++|++|++++.|+.+++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS-HNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999999999877654 48999999999999875 79999999999999999887754
No 488
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=326.19 Aligned_cols=201 Identities=29% Similarity=0.436 Sum_probs=166.3
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcE
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTV 108 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i 108 (1050)
+|+++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..+
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 4889999999963 56999999999999999999999999999999999999999886532 12358
Q ss_pred EEEecCCCC-CcccHHHHhccCCC-C--C----HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHH
Q 001580 109 AYVPQVSWI-FNATVRDNILFGSA-F--E----PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMAR 180 (1050)
Q Consensus 109 ~~v~Q~~~l-~~~TV~eni~~g~~-~--~----~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAr 180 (1050)
+|++|++.+ +..||+||+.++.. . . ..+....++..++....+ ....+|||||||||+|||
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgGe~qrv~la~ 147 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAG-----------RDYPQLSGGEQQRVQLAR 147 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHH
Confidence 999999987 57899999987532 1 1 112333444455543332 334689999999999999
Q ss_pred HHc------cCCCEEEEeCCCCCcCHHHHHHHHHHHHccc-cCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 181 AVY------SNSDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 181 aL~------~~~~vllLDEPts~LD~~~~~~l~~~l~~~~-~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
||+ .+|+++||||||++||+.+++.+.+.+.+.. .+|+|+|++||+++++.. ||+|++|++|++++.|++++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAE 227 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHH
Confidence 999 5999999999999999999999999887765 468999999999999874 79999999999999999887
Q ss_pred hhc
Q 001580 253 LSN 255 (1050)
Q Consensus 253 l~~ 255 (1050)
+..
T Consensus 228 ~~~ 230 (258)
T PRK13548 228 VLT 230 (258)
T ss_pred HhC
Confidence 764
No 489
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=4.9e-36 Score=329.17 Aligned_cols=202 Identities=28% Similarity=0.441 Sum_probs=165.6
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE----E------------
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV----I------------ 104 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~----~------------ 104 (1050)
.++++|++|.|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. +
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (257)
T PRK10619 5 KLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKV 81 (257)
T ss_pred cEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccc
Confidence 489999999996 357999999999999999999999999999999999999998875421 1
Q ss_pred ---------eCcEEEEecCCCCC-cccHHHHhccCC----CCCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCC
Q 001580 105 ---------RGTVAYVPQVSWIF-NATVRDNILFGS----AFEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGV 166 (1050)
Q Consensus 105 ---------~~~i~~v~Q~~~l~-~~TV~eni~~g~----~~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~ 166 (1050)
+..++|+||++.++ ..||+||+.++. .... .+..+.++..++.... .+....
T Consensus 82 ~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~~ 151 (257)
T PRK10619 82 ADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKYPV 151 (257)
T ss_pred ccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCCcc
Confidence 23599999999887 479999997642 1111 1222233333332221 133457
Q ss_pred CCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEe
Q 001580 167 NISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVK 245 (1050)
Q Consensus 167 ~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~ 245 (1050)
+||||||||++|||||+.+|+++||||||++||+.+++++++.+.+...+|+|+|+||||++++.. ||||++|++|+++
T Consensus 152 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 231 (257)
T PRK10619 152 HLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIE 231 (257)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 899999999999999999999999999999999999999999887765568999999999999986 7999999999999
Q ss_pred eccChhhhhc
Q 001580 246 EEGTFEDLSN 255 (1050)
Q Consensus 246 ~~g~~~~l~~ 255 (1050)
+.|+++++..
T Consensus 232 ~~~~~~~~~~ 241 (257)
T PRK10619 232 EEGAPEQLFG 241 (257)
T ss_pred EeCCHHHhhh
Confidence 9999887653
No 490
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-36 Score=329.15 Aligned_cols=206 Identities=26% Similarity=0.372 Sum_probs=167.7
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCc
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGT 107 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~ 107 (1050)
+.|+++|+++.|+.. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|.+.. .+..
T Consensus 6 ~~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (269)
T PRK13648 6 SIIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKH 84 (269)
T ss_pred ceEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 469999999999742 246999999999999999999999999999999999999999886532 1235
Q ss_pred EEEEecCCC--CCcccHHHHhccCCC---CCHH----HHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHH
Q 001580 108 VAYVPQVSW--IFNATVRDNILFGSA---FEPA----RYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSM 178 (1050)
Q Consensus 108 i~~v~Q~~~--l~~~TV~eni~~g~~---~~~~----~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~L 178 (1050)
++|++|+|. ++..|+.+|+.++.. .... +....++..++.+.. .....+||||||||++|
T Consensus 85 i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~l 153 (269)
T PRK13648 85 IGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-----------DYEPNALSGGQKQRVAI 153 (269)
T ss_pred eeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHHHHH
Confidence 899999985 457799999987632 1111 122333333433222 23456899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhhcCEEEEEcCCeEeeccChhhhhcCh
Q 001580 179 ARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQVDRIILVHEGMVKEEGTFEDLSNNG 257 (1050)
Q Consensus 179 AraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 257 (1050)
||||+.+|+++||||||++||+.+++.+++.+.+... .|+|+|++||+++++..||+|++|++|++++.|+++++....
T Consensus 154 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 233 (269)
T PRK13648 154 AGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDHA 233 (269)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcCH
Confidence 9999999999999999999999999999998876544 489999999999998889999999999999999988876543
No 491
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.3e-36 Score=324.64 Aligned_cols=200 Identities=20% Similarity=0.350 Sum_probs=163.9
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE-------------EeCc
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV-------------IRGT 107 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~-------------~~~~ 107 (1050)
.|+++|+++.|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..
T Consensus 2 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 4899999999963 47999999999999999999999999999999999999999886432 1124
Q ss_pred EEEEecCCCCCc-ccHHHHhccCCCCC---------------HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHH
Q 001580 108 VAYVPQVSWIFN-ATVRDNILFGSAFE---------------PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 171 (1050)
Q Consensus 108 i~~v~Q~~~l~~-~TV~eni~~g~~~~---------------~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGG 171 (1050)
++|++|++.++. .||+||+.++.... ..+....++..++.+ .......+||||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G 147 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLAD-----------EADRLAGLLSHG 147 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHH
Confidence 999999998874 69999998753210 011122222222221 234455789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccCh
Q 001580 172 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTF 250 (1050)
Q Consensus 172 qrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 250 (1050)
|||||+|||||+.+|+++||||||++||+.+++++++.+.+... ++|+|++||+++++.. ||+|++|++|++++.|++
T Consensus 148 e~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~ 226 (242)
T TIGR03411 148 QKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSL 226 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCH
Confidence 99999999999999999999999999999999999998776543 6899999999999975 899999999999999998
Q ss_pred hhhhc
Q 001580 251 EDLSN 255 (1050)
Q Consensus 251 ~~l~~ 255 (1050)
+++..
T Consensus 227 ~~~~~ 231 (242)
T TIGR03411 227 DQVQA 231 (242)
T ss_pred HHHhc
Confidence 88764
No 492
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=2.7e-36 Score=315.99 Aligned_cols=173 Identities=28% Similarity=0.444 Sum_probs=143.1
Q ss_pred CCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCC--CChHHHhhheEEEcCCc--ccccc
Q 001580 680 PPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK--FGLMDLRKILGIIPQSP--VLFSG 755 (1050)
Q Consensus 680 ~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~--~~~~~~r~~i~~v~Q~~--~lf~~ 755 (1050)
..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++.++|+||++ .+|..
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 84 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRPQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLFAA 84 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceeEEECCEEccccccchHHHHhhEEEEecChhhccccc
Confidence 369999999999999999999999999999999999999999999999999852 22345678899999998 46778
Q ss_pred cHHHhcccCC---CCCHH----HHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 001580 756 TVRFNLDPFS---EHSDA----DLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDE 828 (1050)
Q Consensus 756 tv~~nl~~~~---~~~~~----~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDE 828 (1050)
|+++|+.+.. ...+. ++.++++.. |++........+||||||||++|||||+++|++|||||
T Consensus 85 tv~~nl~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 85 DVDQDVAFGPLNLGLSEAEVERRVREALTAV-----------GASGLRERPTHCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 9999996521 11222 223333333 34444455567899999999999999999999999999
Q ss_pred cCcCCCHHHHHHHHHHHHHHc-CCcEEEEeecCchh
Q 001580 829 ATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT 863 (1050)
Q Consensus 829 pts~LD~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~ 863 (1050)
||++||+.+.+.+.+.|++.. +++|+|++||++++
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~~ 189 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVDL 189 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeecccc
Confidence 999999999999999999864 47899999999875
No 493
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=313.42 Aligned_cols=206 Identities=24% Similarity=0.399 Sum_probs=171.8
Q ss_pred CcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------------eC
Q 001580 40 PAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RG 106 (1050)
Q Consensus 40 ~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------~~ 106 (1050)
+.+++++++++|+ .-.+++||||++++||+++|+||||||||||+|+|+|.++|++|.+... +.
T Consensus 3 ~lL~v~~l~k~FG---Gl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~ 79 (250)
T COG0411 3 PLLEVRGLSKRFG---GLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARL 79 (250)
T ss_pred ceeeeccceeecC---CEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhc
Confidence 4578999999996 3479999999999999999999999999999999999999998876531 23
Q ss_pred cEEEEecCCCCC-cccHHHHhccCCCC---------------CH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCC
Q 001580 107 TVAYVPQVSWIF-NATVRDNILFGSAF---------------EP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGV 166 (1050)
Q Consensus 107 ~i~~v~Q~~~l~-~~TV~eni~~g~~~---------------~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~ 166 (1050)
.|+.-+|.+.+| +.||.||++.+... ++ ++....++.++|.+.. ++...
T Consensus 80 Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a-----------~~~A~ 148 (250)
T COG0411 80 GIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELA-----------DRPAG 148 (250)
T ss_pred cceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhh-----------cchhh
Confidence 488999999987 78999999876220 01 1112233444444333 34557
Q ss_pred CCCHHHHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeE
Q 001580 167 NISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMV 244 (1050)
Q Consensus 167 ~LSGGqrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i 244 (1050)
+||+|||+|+.|||||+.+|++||||||.+||.|.....+.+.+.+... .|.|+++|.||+..+.. ||||+||+.|++
T Consensus 149 ~LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~ 228 (250)
T COG0411 149 NLSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEV 228 (250)
T ss_pred cCChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcC
Confidence 8999999999999999999999999999999999999999998887665 57999999999999765 799999999999
Q ss_pred eeccChhhhhcChHH
Q 001580 245 KEEGTFEDLSNNGEL 259 (1050)
Q Consensus 245 ~~~g~~~~l~~~~~~ 259 (1050)
+++|+++++.+++..
T Consensus 229 IAeG~P~eV~~dp~V 243 (250)
T COG0411 229 IAEGTPEEVRNNPRV 243 (250)
T ss_pred cccCCHHHHhcCHHh
Confidence 999999999888653
No 494
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=3.5e-36 Score=322.99 Aligned_cols=186 Identities=27% Similarity=0.455 Sum_probs=155.0
Q ss_pred EEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEEEcCCccc---ccccHHHhcccC
Q 001580 688 FTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVL---FSGTVRFNLDPF 764 (1050)
Q Consensus 688 ~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~l---f~~tv~~nl~~~ 764 (1050)
|+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. ..+++++|+||++.+ +..|+.+|+.+.
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~-----~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~ 75 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPPAKGTVKVAGASPG-----KGWRHIGYVPQRHEFAWDFPISVAHTVMSG 75 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCccch-----HhhCcEEEecccccccCCCCccHHHHHHhc
Confidence 578999999999999999999999999999999999999998763 356789999999876 346999998542
Q ss_pred CC--------CC---HHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEEEEeccCcCC
Q 001580 765 SE--------HS---DADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAV 833 (1050)
Q Consensus 765 ~~--------~~---~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~illLDEpts~L 833 (1050)
.. .. ++++.++++..++ +........+||||||||++|||||+++|++|||||||++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~laral~~~p~llilDEP~~~L 144 (223)
T TIGR03771 76 RTGHIGWLRRPCVADFAAVRDALRRVGL-----------TELADRPVGELSGGQRQRVLVARALATRPSVLLLDEPFTGL 144 (223)
T ss_pred cccccccccCCcHHHHHHHHHHHHHhCC-----------chhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 10 11 1223444444443 33344455679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHc-CCcEEEEeecCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 001580 834 DVRTDALIQKTIREEF-KSCTMLIIAHRLNTIID-CDRILLLDSGRVLEYDTPEELLSN 890 (1050)
Q Consensus 834 D~~~~~~i~~~l~~~~-~~~tvi~vtH~~~~~~~-~d~i~vl~~G~i~~~g~~~el~~~ 890 (1050)
|+.++..+.+.|+++. ++.|+|++||+++++.. ||+++++ +|++++.|+++++..+
T Consensus 145 D~~~~~~l~~~l~~~~~~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~~~ 202 (223)
T TIGR03771 145 DMPTQELLTELFIELAGAGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQDP 202 (223)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhcCh
Confidence 9999999999999865 47899999999999876 9999999 8999999999998653
No 495
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.6e-36 Score=323.45 Aligned_cols=199 Identities=28% Similarity=0.478 Sum_probs=162.2
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------------eCcE
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------------RGTV 108 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------------~~~i 108 (1050)
|+++|+++.|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|.+..- +..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999963 479999999999999999999999999999999999999998865321 2359
Q ss_pred EEEecCCCCCc-ccHHHHhccCCCC-C---HHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHc
Q 001580 109 AYVPQVSWIFN-ATVRDNILFGSAF-E---PARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVY 183 (1050)
Q Consensus 109 ~~v~Q~~~l~~-~TV~eni~~g~~~-~---~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~ 183 (1050)
+|++|++.++. .||.||+.++... . .+...+.++..+. +. ........+||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~---l~-------~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV---LK-------EMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh---HH-------HHhhCChhhCCHHHHHHHHHHHHHh
Confidence 99999998874 6999999875321 1 1112222222221 10 1223455789999999999999999
Q ss_pred cCCCEEEEeCCCCCcCHHHHHHHHHHHHcccc-CCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhhh
Q 001580 184 SNSDVFIFDDPLSALDAHVGRQVFDRCIRGEL-SGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFEDL 253 (1050)
Q Consensus 184 ~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~-~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 253 (1050)
.+|+++||||||++||+.+++++++.+.+... .|+|+|++||+++++.. +|+++++++|++++.|+.+++
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999998877654 48999999999999985 799999999999999998876
No 496
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.3e-36 Score=319.94 Aligned_cols=189 Identities=33% Similarity=0.545 Sum_probs=153.9
Q ss_pred EEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeE------------EeCcEEE
Q 001580 43 SIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAV------------IRGTVAY 110 (1050)
Q Consensus 43 ~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~------------~~~~i~~ 110 (1050)
+++|+++.|+.. ++++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+.. .+..++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 368999999632 257999999999999999999999999999999999999999886532 1235899
Q ss_pred EecCCC--CCcccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHH
Q 001580 111 VPQVSW--IFNATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARA 181 (1050)
Q Consensus 111 v~Q~~~--l~~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAra 181 (1050)
++|++. ++..||+||+.++.. ... .+....++..++...++ ....+|||||||||+||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRD-----------RSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHHHHHHHHHHHH
Confidence 999984 467899999987521 111 12233444445443332 3446899999999999999
Q ss_pred HccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCe
Q 001580 182 VYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGM 243 (1050)
Q Consensus 182 L~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~ 243 (1050)
|+.+|+++||||||++||+.+++++++.+.+...+|+|+|++||+++++.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999887765568999999999999987 89999999884
No 497
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-36 Score=296.34 Aligned_cols=211 Identities=25% Similarity=0.353 Sum_probs=171.3
Q ss_pred EEEEEEEEEeCCCCCCceeeeeEEecCCcEEEEECCCCCCHHHHHHHHhccccCCccEEEECCeecCCCChHHHhhheEE
Q 001580 666 IKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGI 745 (1050)
Q Consensus 666 i~~~~v~~~y~~~~~~~l~~vs~~i~~Ge~~~ivG~~GsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~ 745 (1050)
+.+++++.+|.+....+|+|+|++|.+||.+.++||||||||||+|+++|+.+|+.|+|.+||++|..-.. .-|+
T Consensus 4 l~~~~~sl~y~g~~~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~~G~i~l~~r~i~gPga-----ergv 78 (259)
T COG4525 4 LNVSHLSLSYEGKPRSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPSRGSIQLNGRRIEGPGA-----ERGV 78 (259)
T ss_pred eehhheEEecCCcchhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcccceEEECCEeccCCCc-----ccee
Confidence 56789999997665569999999999999999999999999999999999999999999999999976543 4599
Q ss_pred EcCCcccccc-cHHHhcccCCCCCHHHHHHHHHHhcHHHHHHHccCCcchhhhcCCCCCChhHHHHHHHHHHHccCCCEE
Q 001580 746 IPQSPVLFSG-TVRFNLDPFSEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKIL 824 (1050)
Q Consensus 746 v~Q~~~lf~~-tv~~nl~~~~~~~~~~~~~~l~~~~~~~~i~~~p~gl~t~v~~~~~~LSgGq~qrl~lArall~~p~il 824 (1050)
|+|++.|+.. |+.+|+.|+-... -+.++.++.-+++++.. .|+...-....-+||||||||+.|||||.-+|++|
T Consensus 79 VFQ~~~LlPWl~~~dNvafgL~l~--Gi~k~~R~~~a~q~l~~--VgL~~~~~~~i~qLSGGmrQRvGiARALa~eP~~L 154 (259)
T COG4525 79 VFQNEALLPWLNVIDNVAFGLQLR--GIEKAQRREIAHQMLAL--VGLEGAEHKYIWQLSGGMRQRVGIARALAVEPQLL 154 (259)
T ss_pred EeccCccchhhHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHH--hCcccccccceEeecchHHHHHHHHHHhhcCcceE
Confidence 9999999987 9999998653210 01111112222233322 23333334445689999999999999999999999
Q ss_pred EEeccCcCCCHHHHHHHHHHHHHHc--CCcEEEEeecCchhhhh-cCEEEEEe--CCEEEEecChh
Q 001580 825 VLDEATAAVDVRTDALIQKTIREEF--KSCTMLIIAHRLNTIID-CDRILLLD--SGRVLEYDTPE 885 (1050)
Q Consensus 825 lLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~vtH~~~~~~~-~d~i~vl~--~G~i~~~g~~~ 885 (1050)
+||||.++||+-|++.+++.|.+.. .|+.+++|||+.++.-- ++|++||+ .|||++.=+++
T Consensus 155 lLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH~ieEAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 155 LLDEPFGALDALTREQMQELLLDLWQETGKQVLLITHDIEEALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred eecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHhhhheeEEecCCCceeeEecCCC
Confidence 9999999999999999999998854 47999999999999765 99999998 69999865544
No 498
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=9.6e-36 Score=319.98 Aligned_cols=197 Identities=22% Similarity=0.353 Sum_probs=164.6
Q ss_pred EEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE--------eCcEEEEec
Q 001580 42 ISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI--------RGTVAYVPQ 113 (1050)
Q Consensus 42 i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~--------~~~i~~v~Q 113 (1050)
++++|++++|+. +++|+++||++++|++++|+|+||||||||+++|+|+++|++|.+... ...++|+||
T Consensus 1 l~l~~v~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q 77 (223)
T TIGR03740 1 LETKNLSKRFGK---QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIE 77 (223)
T ss_pred CEEEeEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcC
Confidence 478999999963 579999999999999999999999999999999999999998865421 135999999
Q ss_pred CCCCC-cccHHHHhccCC---CCCHHHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccCCCEE
Q 001580 114 VSWIF-NATVRDNILFGS---AFEPARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVF 189 (1050)
Q Consensus 114 ~~~l~-~~TV~eni~~g~---~~~~~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~~~vl 189 (1050)
++.++ ..|++||+.++. ..+..+....++..++.+..+ ....+||||||||++|||||+.+|+++
T Consensus 78 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~~rv~laral~~~p~ll 146 (223)
T TIGR03740 78 SPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGK-----------KKAKQFSLGMKQRLGIAIALLNHPKLL 146 (223)
T ss_pred CCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHh-----------hhHhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99876 579999997542 123344455555555554332 233689999999999999999999999
Q ss_pred EEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccChhh
Q 001580 190 IFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTFED 252 (1050)
Q Consensus 190 lLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 252 (1050)
||||||++||+.+++.+++.+.+...+|+|+|++||+++++.. ||++++|++|++++.|++.+
T Consensus 147 llDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 147 ILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred EECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999887765568999999999999865 89999999999999888754
No 499
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=326.91 Aligned_cols=207 Identities=27% Similarity=0.384 Sum_probs=166.8
Q ss_pred CCcEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCC-----CCCCCeeE----------
Q 001580 39 LPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELP-----PVSDASAV---------- 103 (1050)
Q Consensus 39 ~~~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~-----~~~g~~~~---------- 103 (1050)
...|+++|++|+|+. +++|+|+||+|++|++++|+|+||||||||+++|+|.++ |++|.+..
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 346999999999963 469999999999999999999999999999999999986 46664321
Q ss_pred ----EeCcEEEEecCCCCCcccHHHHhccCCC----CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHH
Q 001580 104 ----IRGTVAYVPQVSWIFNATVRDNILFGSA----FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGG 171 (1050)
Q Consensus 104 ----~~~~i~~v~Q~~~l~~~TV~eni~~g~~----~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGG 171 (1050)
.+..|+|++|++.++..||+||+.++.. ... ++....++..++...+. ..++....+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHH
Confidence 1345999999998888899999987531 122 12233344444322111 1234556789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCcCHHHHHHHHHHHHccccCCcEEEEeccCcchhhh-cCEEEEEcCCeEeeccCh
Q 001580 172 QKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQLHFLSQ-VDRIILVHEGMVKEEGTF 250 (1050)
Q Consensus 172 qrqRv~LAraL~~~~~vllLDEPts~LD~~~~~~l~~~l~~~~~~g~t~ilvtH~~~~l~~-~d~i~~l~~G~i~~~g~~ 250 (1050)
||||++|||||+.+|+++||||||++||+.+++.+.+.+.+.. ++.|+|++||+++++.. +|++++|++|++++.|+.
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNT 239 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999887664 47899999999999865 799999999999999998
Q ss_pred hhhhcC
Q 001580 251 EDLSNN 256 (1050)
Q Consensus 251 ~~l~~~ 256 (1050)
+++...
T Consensus 240 ~~~~~~ 245 (260)
T PRK10744 240 DTIFTK 245 (260)
T ss_pred HHHHhC
Confidence 887543
No 500
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=325.39 Aligned_cols=196 Identities=27% Similarity=0.396 Sum_probs=160.5
Q ss_pred cEEEEeEEEEeCCCCCCCceeeceEEeeCCCEEEEEcCCCCcHHHHHHHHHcCCCCCCCCeeEE-------eCcEEEEec
Q 001580 41 AISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTGEGKTSLISAMLGELPPVSDASAVI-------RGTVAYVPQ 113 (1050)
Q Consensus 41 ~i~~~~~~f~~~~~~~~~~L~~isl~i~~G~~~~lvG~nGsGKSTLl~~l~G~~~~~~g~~~~~-------~~~i~~v~Q 113 (1050)
+|+++|+++.|+. +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|.+..- ...++|++|
T Consensus 1 ml~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q 77 (255)
T PRK11248 1 MLQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQ 77 (255)
T ss_pred CEEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeC
Confidence 3789999999963 579999999999999999999999999999999999999998876431 124899999
Q ss_pred CCCCC-cccHHHHhccCCC---CCH----HHHHHHHHHhCcHHHHhcCCCCCcccccCCCCCCCHHHHHHHHHHHHHccC
Q 001580 114 VSWIF-NATVRDNILFGSA---FEP----ARYEKAIDVTSLQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSN 185 (1050)
Q Consensus 114 ~~~l~-~~TV~eni~~g~~---~~~----~~~~~~~~~~~l~~~~~~~~~g~~t~vg~~g~~LSGGqrqRv~LAraL~~~ 185 (1050)
++.++ ..||.||+.++.. ... .++...++..++....+ ....+|||||||||+|||||+.+
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGq~qrl~laral~~~ 146 (255)
T PRK11248 78 NEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEK-----------RYIWQLSGGQRQRVGIARALAAN 146 (255)
T ss_pred CCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhh-----------CChhhCCHHHHHHHHHHHHHhcC
Confidence 99877 5799999987521 111 12333444445443322 33468999999999999999999
Q ss_pred CCEEEEeCCCCCcCHHHHHHHHHHHHccc-cCCcEEEEeccCcchhhh-cCEEEEEc--CCeEeeccCh
Q 001580 186 SDVFIFDDPLSALDAHVGRQVFDRCIRGE-LSGKTRVLVTNQLHFLSQ-VDRIILVH--EGMVKEEGTF 250 (1050)
Q Consensus 186 ~~vllLDEPts~LD~~~~~~l~~~l~~~~-~~g~t~ilvtH~~~~l~~-~d~i~~l~--~G~i~~~g~~ 250 (1050)
|++|||||||++||+.+++++++.+.+.. ..|+|+|++|||++++.. ||++++|+ +|++++.++.
T Consensus 147 p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 147 PQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999999887653 358999999999999875 79999998 5999887654
Done!