Query 001580
Match_columns 1050
No_of_seqs 410 out of 3972
Neff 8.0
Searched_HMMs 29240
Date Tue Mar 26 17:06:37 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/001580.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_877-881//hhsearch_pdb/001580hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1185.8 81.9 890 2-901 373-1315(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1024.0 75.5 884 4-902 347-1270(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 661.3 65.1 510 383-902 138-653 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 615.4 54.4 509 383-901 110-624 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 601.0 61.0 546 343-901 37-589 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 600.3 64.5 546 344-900 24-576 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 593.2 61.8 546 344-900 15-574 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 585.8 71.3 547 344-901 26-578 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 585.7 73.9 545 344-900 26-577 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 585.4 69.7 549 344-901 20-582 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1185.80 Aligned_cols=890 Identities=22% Similarity=0.287 Sum_probs=652.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---CCCCCCCCEEEEEEEEEECCCCCCCCEEECEEEEECCCEEEEECC
Q ss_conf 25899999999999999999851210159999---999999918999489982899999831100088609979999959
Q 001580 2 FVVAWQVVNANVSLKRMEEFLLAEEKILLPNP---PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGG 78 (1050)
Q Consensus 2 ~~~~~~~~~a~~s~~r~~~~l~~~~~~~~~~~---~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isL~i~~Ge~valvG~ 78 (1050)
+..+..+.++.++++|+.+|++.++....+.. +..+....|+++|++|+|++.+++++|+|+||++++|+.+||||+
T Consensus 373 ~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~ 452 (1321)
T 4f4c_A 373 GPQLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGS 452 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEEC
T ss_conf 99999999999999999999717853456665565677888767999855407999987433331886228827899805
Q ss_pred CCCCHHHHHHHHHCCCCCCCCCEEE------------EECCEEEEECCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHC
Q ss_conf 9982899999997398999887067------------7092899924787876348998614999-99889999999809
Q 001580 79 TGEGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTS 145 (1050)
Q Consensus 79 nGSGKSTLl~~L~G~~~~~~G~~~~------------~~~~Ig~v~Q~~~L~~~TV~enI~~g~~-~~~~~~~~~~~~~~ 145 (1050)
+|||||||+++|+|+++|++|.+.+ +|..||||||+||||++||+|||+||.+ .+++++.++++.|+
T Consensus 453 sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~ 532 (1321)
T 4f4c_A 453 SGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMAN 532 (1321)
T ss_dssp SSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 89857788887545651644861579965011259998504666587533207861678864155220999999998756
Q ss_pred CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECC
Q ss_conf 37898409999963125799877978999999999870299899993978885989999999999700159948999515
Q 001580 146 LQHDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTN 225 (1050)
Q Consensus 146 L~~~i~~l~~g~~t~ig~~g~~LSGGQKqRiaLARAL~~~~~IllLDEpts~LD~~s~~~i~~~ll~~~~~~~T~IlvTH 225 (1050)
+++++..+|+|++|.+|++|.+|||||||||+||||+|++|+|+|||||||+||+++++.+.+ ++....++||+|+|||
T Consensus 533 l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~-~l~~~~~~~T~iiiaH 611 (1321)
T 4f4c_A 533 AEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQ-ALDKAAKGRTTIIIAH 611 (1321)
T ss_dssp CHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHH-HHHHHHTTSEEEEECS
T ss_pred CHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHCCCEEEEECC
T ss_conf 546887088888607558988777778799999998725999899845544688789999999-9999847988999736
Q ss_pred CCCHHHHCCEEEEECCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC---CCC-CCCCC-----CCCCCCCCC
Q ss_conf 912142129789975984844057243302828999999983023444310036---855-46678-----888888988
Q 001580 226 QLHFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKED---GET-VDNKT-----SKPAANGVD 296 (1050)
Q Consensus 226 ~l~~l~~aD~I~vL~~G~i~~~g~~~eL~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~-----~~~~~~~~~ 296 (1050)
|++++..||+|++|++|++++.|++++|.++++.|..++..+...+........ .+. ..... .........
T Consensus 612 rls~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1321)
T 4f4c_A 612 RLSTIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMD 691 (1321)
T ss_dssp CTTTTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHHCC--------------------------
T ss_pred CHHHHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 38789868989996399651368999999853279999996221222233233443322321112222234222222211
Q ss_pred CCCCC----------CC--CCCCCCCCCC--CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99997----------53--3322234551--0022354320165218999999998556899999999999999989855
Q 001580 297 NDLPK----------EA--SDTRKTKEGK--SVLIKQEERETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSS 362 (1050)
Q Consensus 297 ~~l~~----------~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (1050)
..... .. ........+. ....+++....+...+.++..++.....++.+++.+++.++...+....
T Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 771 (1321)
T 4f4c_A 692 DIMNRVRSSTIGSITNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTY 771 (1321)
T ss_dssp ------------------------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHH
T ss_pred CHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02211101321245677402577753154038999999997078631099999998778999999999999999999999
Q ss_pred HHHHHHHCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC--CC
Q ss_conf 4345552243----44478882699999999999999999999999999999999999999999998199000203--69
Q 001580 363 STWLSYWTDQ----SSLKTHGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHT--NP 436 (1050)
Q Consensus 363 ~~~l~~~~~~----~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~~f~~--~~ 436 (1050)
+.++..|.+. .........+|..+|.++++...++.++..++....+.+...++|..++++++++|+.||+. ++
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~ 851 (1321)
T 4f4c_A 772 SVFFTSFMNVFAGNPADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNA 851 (1321)
T ss_dssp HHHHHHHHHHTSSCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGC
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
T ss_conf 99999999875179345566789999999999999999999999999999999999999999888734993332167888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 45999999954989999999999999999999999999999999999999999999999999999999999999998411
Q 001580 437 LGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITR 516 (1050)
Q Consensus 437 ~G~i~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~~~~~~~~~~~~~~~~~~~~~~~ 516 (1050)
+|+++||+++|+..++..+...+..++..+..++..++++.+..+...+++++++++++....++.+.............
T Consensus 852 ~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1321)
T 4f4c_A 852 SGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEF 931 (1321)
T ss_dssp HHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHH
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 48888502505999999999999999998653777702213786899999999888999999999999999999999998
Q ss_pred CCHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 6268799998833999999602999999999999999999999987767999999----999999999999999994396
Q 001580 517 SPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRL----EIVGGLMIWLTATFAVVQNGS 592 (1050)
Q Consensus 517 ~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~ 592 (1050)
++....+.|.+.|+++||+|+.++++.+.+.+..+...+..........+..... .+...++++++..+.......
T Consensus 932 ~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~ 1011 (1321)
T 4f4c_A 932 ADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPT 1011 (1321)
T ss_dssp HHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 88988999999627988861414889999999999999999999999999999999999999999998757887537654
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 53035679999999999999999999999999999999999999996211899996545799999999987568999899
Q 001580 593 AENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVV 672 (1050)
Q Consensus 593 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~ 672 (1050)
.+. ..+..++........++..+...+..++....+.+|+.++++.+++.+. ...+.+.|+..|.|+|+||+
T Consensus 1012 ~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~~~~~~~~~~g~I~f~nVs 1083 (1321)
T 4f4c_A 1012 MQP-----MRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDS---LSLAGEKKKLYGKVIFKNVR 1083 (1321)
T ss_dssp SCH-----HHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCT---TCCCSBCCCCCCCEEEEEEE
T ss_pred CCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---CCCCCCCCCCCCEEEEEEEE
T ss_conf 214-----7899999999877889999999999999999999989998607665777---66778788888818999879
Q ss_pred EEECCC-CCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHEEEECCCCC
Q ss_conf 994899-9981000238963996999997999998899999840466886289998960689895887521278767765
Q 001580 673 LRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPV 751 (1050)
Q Consensus 673 ~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~~GaGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~ 751 (1050)
|+|+.+ ..++|+|+||+|+|||++|||||||||||||+++|+|+++|++|+|.+||+|+++++..++|++++||||+|.
T Consensus 1084 f~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~ 1163 (1321)
T 4f4c_A 1084 FAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPT 1163 (1321)
T ss_dssp ECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCC
T ss_pred EECCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCE
T ss_conf 85799998821245169988989999989999819999999956863899789999998654999999854599878997
Q ss_pred CCCCCHHHHCCCC---CCCCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEC
Q ss_conf 5664477704669---9999889999999930899998725994036302999999459999999999703998999846
Q 001580 752 LFSGTVRFNLDPF---SEHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDE 828 (1050)
Q Consensus 752 lf~~tv~~nl~~~---~~~~~~~~~~~~~~~~l~~~i~~~p~gl~t~v~e~~~~LSgGqkqrl~lArall~~p~illLDE 828 (1050)
+|++|||+||.++ .+.++++++++++.++++++++.+|.||||.++|+|.+||||||||++||||++++|+||||||
T Consensus 1164 LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDE 1243 (1321)
T 4f4c_A 1164 LFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDE 1243 (1321)
T ss_dssp CCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEES
T ss_pred EECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 32723999974549999999999999999829849997176789998238891569999999999999971799899968
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHH
Q ss_conf 6748899989999999998738948998505810365319899995977998439367851389817999996
Q 001580 829 ATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 901 (1050)
Q Consensus 829 pts~lD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~ 901 (1050)
|||+||++|++.|++.|++.++++|+|+||||++++..||+|+||++|+|+|+|+|+||+++. +.|.++++.
T Consensus 1244 aTSaLD~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~~-g~y~~L~~~ 1315 (1321)
T 4f4c_A 1244 ATSALDTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSEK-GAYYKLTQK 1315 (1321)
T ss_dssp CCCSTTSHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHCC----------
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHH
T ss_conf 111578999999999999973999899960689999969999999898999988889998498-099999999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1024.02 Aligned_cols=884 Identities=21% Similarity=0.299 Sum_probs=615.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCC-CCC--CCCCCCCCEEEEEEEEEECCCCCCCCEEECEEEEECCCEEEEECCCC
Q ss_conf 899999999999999999851210159-999--99999991899948998289999983110008860997999995999
Q 001580 4 VAWQVVNANVSLKRMEEFLLAEEKILL-PNP--PLTSGLPAISIRNGYFSWDSKAERPTLLNINLDIPVGSLVAIVGGTG 80 (1050)
Q Consensus 4 ~~~~~~~a~~s~~r~~~~l~~~~~~~~-~~~--~~~~~~~~i~~~~~~f~~~~~~~~~~L~~isL~i~~Ge~valvG~nG 80 (1050)
.+.++.++..+.+|+.++++.+..... +.. +..+....|+++|++|+|+...+.++|+|+||++++|++++|+|+||
T Consensus 347 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sG 426 (1284)
T 3g5u_A 347 NIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSG 426 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCC
T ss_conf 99999999999999999972898677666567777777771899998997699998710125458975998899989999
Q ss_pred CCHHHHHHHHHCCCCCCCCCEEE------------EECCEEEEECCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHCCH
Q ss_conf 82899999997398999887067------------7092899924787876348998614999-9988999999980937
Q 001580 81 EGKTSLISAMLGELPPVSDASAV------------IRGTVAYVPQVSWIFNATVRDNILFGSA-FEPARYEKAIDVTSLQ 147 (1050)
Q Consensus 81 SGKSTLl~~L~G~~~~~~G~~~~------------~~~~Ig~v~Q~~~L~~~TV~enI~~g~~-~~~~~~~~~~~~~~L~ 147 (1050)
||||||+++|+|+++|++|.+.+ ++..||||||+||+|++||+|||.+|.+ .+.+++.++++.+++.
T Consensus 427 sGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~ 506 (1284)
T 3g5u_A 427 CGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAY 506 (1284)
T ss_dssp SSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCH
T ss_conf 97999999980788999738999999877579999986548986887537766999974579899999999999982969
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCC
Q ss_conf 89840999996312579987797899999999987029989999397888598999999999970015994899951591
Q 001580 148 HDLDLLPGGDVTEIGERGVNISGGQKQRVSMARAVYSNSDVFIFDDPLSALDAHVGRQVFDRCIRGELSGKTRVLVTNQL 227 (1050)
Q Consensus 148 ~~i~~l~~g~~t~ig~~g~~LSGGQKqRiaLARAL~~~~~IllLDEpts~LD~~s~~~i~~~ll~~~~~~~T~IlvTH~l 227 (1050)
+++..+|.|++|.+|++|.+|||||||||+||||++++|+|++||||||+||+++++.+.+ +++...+|+|+|+||||+
T Consensus 507 ~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~-~l~~~~~~~t~i~itH~l 585 (1284)
T 3g5u_A 507 DFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQA-ALDKAREGRTTIVIAHRL 585 (1284)
T ss_dssp HHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHH-HHHHHHTTSEEEEECSCH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH-HHHHHCCCCEEEEEECCH
T ss_conf 9997465633450147878659999999999999952999899979877779999999999-999973999899994077
Q ss_pred CHHHHCCEEEEECCCEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCC-C-CCCCCCCCCCCCCC
Q ss_conf 214212978997598484405724330282899999998302344431003---685546678-8-88888988999975
Q 001580 228 HFLSQVDRIILVHEGMVKEEGTFEDLSNNGELFQKLMENAGKMEEYVEEKE---DGETVDNKT-S-KPAANGVDNDLPKE 302 (1050)
Q Consensus 228 ~~l~~aD~I~vL~~G~i~~~g~~~eL~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~-~~~~~~~~~~l~~~ 302 (1050)
+++..||+|++|++|++++.|+++++....+.|..+...+....+...... ......... . .............
T Consensus 586 ~~i~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 664 (1284)
T 3g5u_A 586 STVRNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRST- 664 (1284)
T ss_dssp HHHTTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC---------------------------------------
T ss_pred HHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
T ss_conf 8997499899998999999788999986787799999974300221113333332222234433333333200034543-
Q ss_pred CCCCCCCCCCCCHHHHHHH--HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHCCCCCCC
Q ss_conf 3332223455100223543--201652189999999985568999999999999999898554345----5522434447
Q 001580 303 ASDTRKTKEGKSVLIKQEE--RETGVVSFKVLSRYKDALGGLWVVLILLLCYFLTETLRVSSSTWL----SYWTDQSSLK 376 (1050)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~ 376 (1050)
.................+. .......+..+.++.... ++.+++.+++.++...+....+.++ ..+.+.....
T Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 742 (1284)
T 3g5u_A 665 RKSICGPHDQDRKLSTKEALDEDVPPASFWRILKLNSTE--WPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPE 742 (1284)
T ss_dssp -------------------CCCCCSCCCTTHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 334456422332110245553136625899999984515--799999999999999999999999999999985568503
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC--CCCHHHHHHHHHHHHHHHH
Q ss_conf --888269999999999999999999999999999999999999999999819900020--3694599999995498999
Q 001580 377 --THGPLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFH--TNPLGRIINRFAKDLGDID 452 (1050)
Q Consensus 377 --~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~~f~--~~~~G~i~~rl~~D~~~i~ 452 (1050)
.....++..++.++++...+..+...++....+.+...++|..++++++++|+.||+ ++++|++++|+++|+..++
T Consensus 743 ~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~ 822 (1284)
T 3g5u_A 743 TQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVK 822 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 36779999999999999999999999999999999999999999999999839988875789988999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCH
Q ss_conf 99999999999999999999999999999999---999999999999999999999999999984116268799998833
Q 001580 453 RNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSL---WAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNG 529 (1050)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~lli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g 529 (1050)
..+...+..++..+..++..++...++.|... .+++|+++++.. ...+...................+.|.++|
T Consensus 823 ~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g 899 (1284)
T 3g5u_A 823 GATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGV---VEMKMLSGQALKDKKELEGSGKIATEAIEN 899 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999969999999999999999999---999999999999999999999999999988
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHHH
Q ss_conf 9999996029999999999999999999999877679999999999999999999999--94396530356799999999
Q 001580 530 LSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWLTATFAV--VQNGSAENQEAFASTMGLLL 607 (1050)
Q Consensus 530 ~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~l 607 (1050)
++++|+|+.++++.+.+.+..+...+..........+.......+..+...+..++.. +..+..+....+ .++
T Consensus 900 i~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~-----~~~ 974 (1284)
T 3g5u_A 900 FRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVL-----LVF 974 (1284)
T ss_dssp CTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHH-----HHH
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH-----HHH
T ss_conf 999998465999999999999999999999999999999999999999999999999999990980699999-----999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEE
Q ss_conf 99999999999999999999999999999996211899996545799999999987568999899994899-99810002
Q 001580 608 SYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGL 686 (1050)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~i 686 (1050)
.+......++..+............+.+|+.++++.+++....... ..+.++..+.++++||+|+|+.. ..++|+|+
T Consensus 975 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~v 1052 (1284)
T 3g5u_A 975 SAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQ--GLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGL 1052 (1284)
T ss_dssp HHHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSS--CCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCCCCCCCEEEEEEEEECCCCCCCEEECCE
T ss_conf 9999999999999999999999999999999998388766665556--65456777857999989977999987002030
Q ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHCCCCC-
Q ss_conf 3896399699999799999889999984046688628999896068989588752127876776556644777046699-
Q 001580 687 SFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS- 765 (1050)
Q Consensus 687 sl~i~~Ge~~~ivG~~GaGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~- 765 (1050)
||++++||++||+||||||||||+++|.|+++|++|+|.+||.|++..+...+|++++||||++.+|++||++|+.++.
T Consensus 1053 sl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~ 1132 (1284)
T 3g5u_A 1053 SLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDN 1132 (1284)
T ss_dssp CEEECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCS
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCC
T ss_conf 59976998899988999978999999946867899779899998000789999702689877874066669999746687
Q ss_pred --CCCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH
Q ss_conf --999889999999930899998725994036302999999459999999999703998999846674889998999999
Q 001580 766 --EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQK 843 (1050)
Q Consensus 766 --~~~~~~~~~~~~~~~l~~~i~~~p~gl~t~v~e~~~~LSgGqkqrl~lArall~~p~illLDEpts~lD~~~~~~i~~ 843 (1050)
..++++++++++.++++++++++|.||+|.++++|.+||||||||++||||++++|+||||||||++||+.+++.+++
T Consensus 1133 ~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~ 1212 (1284)
T 3g5u_A 1133 SRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQE 1212 (1284)
T ss_dssp SCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHH
T ss_conf 78999999999999839599997270424561178889338999999999999974999999868755579999999999
Q ss_pred HHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 99987389489985058103653198999959779984393678513898179999961
Q 001580 844 TIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 902 (1050)
Q Consensus 844 ~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~ 902 (1050)
.|++..+++|+|+||||++++..||||++|++|++++.|+|++++++. +.|..++...
T Consensus 1213 ~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~~-g~y~~l~~~q 1270 (1284)
T 3g5u_A 1213 ALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQK-GIYFSMVSVQ 1270 (1284)
T ss_dssp HHHHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHSC-SHHHHHHHHH
T ss_pred HHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHHH
T ss_conf 999867999899995587999809989999899899977899998477-7799999997
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=661.25 Aligned_cols=510 Identities=20% Similarity=0.285 Sum_probs=403.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999981990002036945999999954989999999999999
Q 001580 383 YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMF 462 (1050)
Q Consensus 383 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~~f~~~~~G~i~~rl~~D~~~i~~~~~~~~~~~ 462 (1050)
+...+..++++..++.++..++..+.+.+...++|..+|+|++++|+.||+++++|++++|+++|+..++..+...+..+
T Consensus 138 ~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~ 217 (1321)
T 4f4c_A 138 VVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMA 217 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999978898998799848999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999841162687999988339999996029999
Q 001580 463 MGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRM 542 (1050)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~ 542 (1050)
+..+..++..+++++++.|...++++..++++......+.+..+...+......+...+.+.|.++|+++||+|++++++
T Consensus 218 ~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~ 297 (1321)
T 4f4c_A 218 FQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYE 297 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 99999999999999999899999999999999999999999999999999999999999999999839999982142999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999987767999999999999----99999999999439653035679999999999999999999
Q 001580 543 ADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGL----MIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLT 618 (1050)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 618 (1050)
.+.+.+..+...+..........+....+.++..+ ++++++. .+..+..+.. .+...+.++..+..++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~v~~g~lt~g-----~~~~~~~~~~~~~~~l~ 370 (1321)
T 4f4c_A 298 LERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVG--WVHDGSLNFG-----DMLTTFSSVMMGSMALG 370 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTTTSSCHH-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCCCHH-----HHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999999--9995998699-----99999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECC-CCCCCEEEEEEEECCCCEEE
Q ss_conf 99999999999999999999621189999654579999999998756899989999489-99981000238963996999
Q 001580 619 AVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRP-ELPPVLHGLSFTIPPSDKVG 697 (1050)
Q Consensus 619 ~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~-~~~~~l~~isl~i~~Ge~~~ 697 (1050)
.+......+.....+.+|+.++++.+++.+... .......+..+.|+|+||+|+|+. ...++|+|+||++++|+++|
T Consensus 371 ~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~--~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~va 448 (1321)
T 4f4c_A 371 LAGPQLAVLGTAQGAASGIYEVLDRKPVIDSSS--KAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVA 448 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSCCSSCSS--SCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEE
T ss_conf 899999999999999999999971785345666--556567788876799985540799998743333188622882789
Q ss_pred EECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHCCCCCC-CCHHHHHHHH
Q ss_conf 997999998899999840466886289998960689895887521278767765566447770466999-9988999999
Q 001580 698 IVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEAL 776 (1050)
Q Consensus 698 ivG~~GaGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~~ 776 (1050)
|+||||||||||+++|+|+++|++|+|.+||+|+++++..++|++|+||||+|++|++||++||.++.+ .+++++++++
T Consensus 449 ivG~sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~ 528 (1321)
T 4f4c_A 449 LVGSSGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAAC 528 (1321)
T ss_dssp EEECSSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf 98058985778888754565164486157996501125999850466658753320786167886415522099999999
Q ss_pred HHHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 99308999987259940363029999994599999999997039989998466748899989999999998738948998
Q 001580 777 ERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLI 856 (1050)
Q Consensus 777 ~~~~l~~~i~~~p~gl~t~v~e~~~~LSgGqkqrl~lArall~~p~illLDEpts~lD~~~~~~i~~~l~~~~~~~tvi~ 856 (1050)
+.++++++++.+|.|++|.+||+|.+||||||||++||||++++|+|||||||||+||+++++.++++|.++.+++|+|+
T Consensus 529 ~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~ii 608 (1321)
T 4f4c_A 529 KMANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTII 608 (1321)
T ss_dssp HHTTCHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEE
T ss_pred HHCCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 87565468870888886075589887777787999999987259998998455446887899999999999847988999
Q ss_pred EECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 5058103653198999959779984393678513898179999961
Q 001580 857 IAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQST 902 (1050)
Q Consensus 857 vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~~ 902 (1050)
|||+++++..||+|++|++|+|++.|+|+||+++ ++.|..++...
T Consensus 609 iaHrls~i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q 653 (1321)
T 4f4c_A 609 IAHRLSTIRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQ 653 (1321)
T ss_dssp ECSCTTTTTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHH
T ss_pred ECCCHHHHHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHH
T ss_conf 7363878986898999639965136899999985-32799999962
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=615.36 Aligned_cols=509 Identities=20% Similarity=0.316 Sum_probs=392.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999981990002036945999999954989999999999999
Q 001580 383 YNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMF 462 (1050)
Q Consensus 383 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~p~~~f~~~~~G~i~~rl~~D~~~i~~~~~~~~~~~ 462 (1050)
+...+..++++..++.++..++....+.+...++|..+|++++++|+.||+++++|++++|+++|+..++..+...+..+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~ 189 (1284)
T 3g5u_A 110 YAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMF 189 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999986998997568877899999988999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCHHHHH
Q ss_conf 99999999999999999999999999999999999999999999999999841162687999988339999996029999
Q 001580 463 MGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRM 542 (1050)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~ 542 (1050)
+..+..++..++++++..|...+++++++++++....++.+..+...+......++....+.|.++|+++||+|+.++++
T Consensus 190 ~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~ 269 (1284)
T 3g5u_A 190 FQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKE 269 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHH
T ss_conf 99999999999999999899999999999999999999999999999999999999999999999787999984653999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999987767999----99999999999999999999439653035679999999999999999999
Q 001580 543 ADINGKSMDKNIRYTLVNMGANRWLA----IRLEIVGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLT 618 (1050)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 618 (1050)
.+.+.+..+...+..........+.. +.......+++|+++.+.. .+..+....++. +.+......++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~--~g~~~~g~~~~~-----~~~~~~~~~~~~ 342 (1284)
T 3g5u_A 270 LERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVI--SKEYSIGQVLTV-----FFSVLIGAFSVG 342 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HSSSCSSCHHHH-----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCHHHHHHH-----HHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999999999--299889999999-----999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCEEEEEEEECCCCEEE
Q ss_conf 999999999999999999996211899996545799999999987568999899994899-9981000238963996999
Q 001580 619 AVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVG 697 (1050)
Q Consensus 619 ~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ 697 (1050)
.+...+..++....+.+|+.++++.+++.+........ ..+..+.|+++||+|+|++. ..++|+|+||++++||++|
T Consensus 343 ~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~--~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ 420 (1284)
T 3g5u_A 343 QASPNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHK--PDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVA 420 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCC--CTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--CCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEE
T ss_conf 99999999999999999999997289867766656777--7777771899998997699998710125458975998899
Q ss_pred EECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHH
Q ss_conf 99799999889999984046688628999896068989588752127876776556644777046699-99988999999
Q 001580 698 IVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFS-EHSDADLWEAL 776 (1050)
Q Consensus 698 ivG~~GaGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~-~~~~~~~~~~~ 776 (1050)
|+||||||||||+++|.|+++|++|+|.+||.|+..++..++|++++||||+|.+|++||++|+.++. +.+++++++++
T Consensus 421 ivG~sGsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~ 500 (1284)
T 3g5u_A 421 LVGNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAV 500 (1284)
T ss_dssp EECCSSSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH
T ss_conf 98999997999999980788999738999999877579999986548986887537766999974579899999999999
Q ss_pred HHHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 99308999987259940363029999994599999999997039989998466748899989999999998738948998
Q 001580 777 ERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLI 856 (1050)
Q Consensus 777 ~~~~l~~~i~~~p~gl~t~v~e~~~~LSgGqkqrl~lArall~~p~illLDEpts~lD~~~~~~i~~~l~~~~~~~tvi~ 856 (1050)
+.++++++++++|.|++|.+++.|.+||||||||++||||++++|+||||||||++||+++++.+++.++...+++|+|+
T Consensus 501 ~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~ 580 (1284)
T 3g5u_A 501 KEANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIV 580 (1284)
T ss_dssp HHTTCHHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 98296999974656334501478786599999999999999529998999798777799999999999999739998999
Q ss_pred EECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHH
Q ss_conf 505810365319899995977998439367851389817999996
Q 001580 857 IAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSKMVQS 901 (1050)
Q Consensus 857 vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~~~~~ 901 (1050)
||||++++..||+|++|++|++++.|+|++++++. +.|..++..
T Consensus 581 itH~l~~i~~~d~i~vl~~G~i~~~g~~~~l~~~~-~~~~~~~~~ 624 (1284)
T 3g5u_A 581 IAHRLSTVRNADVIAGFDGGVIVEQGNHDELMREK-GIYFKLVMT 624 (1284)
T ss_dssp ECSCHHHHTTCSEEEECSSSCCCCEECHHHHHHTT-SHHHHHHHH
T ss_pred EECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCC-CHHHHHHHH
T ss_conf 94077899749989999899999978899998678-779999997
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=601.01 Aligned_cols=546 Identities=25% Similarity=0.364 Sum_probs=419.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998985543455522434447888--26999999999999999999999999999999999999999
Q 001580 343 WVVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHG--PLFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAM 420 (1050)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 420 (1050)
+.++..+++.++...+.+..|.+++.+.|........ ...+..++.++.+...++.+...++....+.+...+++..+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l 116 (598)
T 3qf4_B 37 FTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRLRKEL 116 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999997368889999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998199000203694599999995498999999999999999999999999999999999999999999999999999
Q 001580 421 LHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLY 500 (1050)
Q Consensus 421 ~~~ll~~p~~~f~~~~~G~i~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~~~~~~~ 500 (1050)
++++++.|..||+++++|++++|+++|+..++..+...+..++..+..++..++.++.+.+...++.+.++++++.....
T Consensus 117 ~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~ 196 (598)
T 3qf4_B 117 FEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQI 196 (598)
T ss_dssp HHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99997799999768888999999999999999999999999999999999999999999899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q ss_conf 99999999999984116268799998833999999602999999999999999999999987767999999999999---
Q 001580 501 YQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGL--- 577 (1050)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--- 577 (1050)
+.+..++..+......+++.+.+.|.++|+++||+|+.++++.+.+.+..+...+..........+......++..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (598)
T 3qf4_B 197 VSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFA 276 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999737999997487099999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf -9999999999943965303567999999999999999999999999999999999999999621189999654579999
Q 001580 578 -MIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRP 656 (1050)
Q Consensus 578 -~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~ 656 (1050)
++++++. . ...+..+ .+.+..++.+...+..++..+...+..++....+.+|+.++++.+++... ...
T Consensus 277 ~~~~~g~~-l-~~~g~ls-----~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~----~~~ 345 (598)
T 3qf4_B 277 LISGFGGW-L-ALKDIIT-----VGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD----PDA 345 (598)
T ss_dssp HHHHHHHH-H-GGGTSSC-----HHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCC----SSC
T ss_pred HHHHHHHH-H-HHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----CCC
T ss_conf 99999999-9-9859978-----99999999999999999999999999999999999999999768877777----777
Q ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCH
Q ss_conf 99999875689998999948999981000238963996999997999998899999840466886289998960689895
Q 001580 657 PPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGL 736 (1050)
Q Consensus 657 ~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~~GaGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~ 736 (1050)
.+.++..+.|+++||+|+|+++ .++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.++|.|+.+.+.
T Consensus 346 ~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~ 424 (598)
T 3qf4_B 346 VELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKR 424 (598)
T ss_dssp CCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEEGGGSCH
T ss_pred CCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCH
T ss_conf 7777777718999989977999-860122279986998899989999969999999945857998089999998301889
Q ss_pred HHHHHHEEEECCCCCCCCCCHHHHCCCCCC-CCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 887521278767765566447770466999-9988999999993089999872599403630299999945999999999
Q 001580 737 MDLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSR 815 (1050)
Q Consensus 737 ~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~~~~~~l~~~i~~~p~gl~t~v~e~~~~LSgGqkqrl~lAr 815 (1050)
..+|++++|+||++.+|++|+++|+.++.+ .++++++++++.++++++++++|.|++|.+++.|.+||||||||++|||
T Consensus 425 ~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Qrv~iAr 504 (598)
T 3qf4_B 425 SSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITR 504 (598)
T ss_dssp HHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHH
T ss_conf 99984108990798232463999974479999999999999996978889746453236422788987999999999999
Q ss_pred HHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHH
Q ss_conf 97039989998466748899989999999998738948998505810365319899995977998439367851389817
Q 001580 816 ALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSF 895 (1050)
Q Consensus 816 all~~p~illLDEpts~lD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~ 895 (1050)
|++++|++|+|||||++||+.++..+.+.++++.+++|+|+|||+++.+..||+|++|++|++++.|+|+|++++. +.|
T Consensus 505 al~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~~ 583 (598)
T 3qf4_B 505 AFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKR-GFY 583 (598)
T ss_dssp HHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHHTT-CHH
T ss_pred HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCC-CHH
T ss_conf 9964999999989766799999999999999980899899994277899719989999899999877899998678-779
Q ss_pred HHHHHH
Q ss_conf 999996
Q 001580 896 SKMVQS 901 (1050)
Q Consensus 896 ~~~~~~ 901 (1050)
..++..
T Consensus 584 ~~~~~~ 589 (598)
T 3qf4_B 584 YELFTS 589 (598)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999999
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=600.30 Aligned_cols=546 Identities=22% Similarity=0.339 Sum_probs=404.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999898554345552243444788826--9999999999999999999999999999999999999999
Q 001580 344 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGPL--FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 421 (1050)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 421 (1050)
.+++.+++.++...+.+..|.++..+.|.......... .+...+.++.+...+..+...++....+.+...++|..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~ 103 (587)
T 3qf4_A 24 FAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCTVFASYASQNFGADLRRDLF 103 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999873698799999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99981990002036945999999954989999999999999999999999999999999999999999999999999999
Q 001580 422 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 501 (1050)
Q Consensus 422 ~~ll~~p~~~f~~~~~G~i~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~~~~~~~~ 501 (1050)
+++++.|..+|+++++|++++|+++|+..++..+...+..++.....++..++.+..+.+...++++..+++++....++
T Consensus 104 ~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~ 183 (587)
T 3qf4_A 104 RKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSVLIFLIPPIVLLFVWL 183 (587)
T ss_dssp HHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99978897997658889999999999999999999999999999999999999999998999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHH
Q ss_conf 9999999999984116268799998833999999602999999999999999999999987767999999999----999
Q 001580 502 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIV----GGL 577 (1050)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l 577 (1050)
.+..+...+......+++.+.+.|.++|+++||+|+.++...+.+.+..+...+..........+.......+ ..+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (587)
T 3qf4_A 184 TKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVFALPLFIFIVNMGMIA 263 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999998559999986214999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999999999439653035679999999999999999999999999999999999999996211899996545799999
Q 001580 578 MIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPP 657 (1050)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~ 657 (1050)
++++++. . ...+..+. ..+..++.+...+..++..+...+..+.....+.+|+.++++.+++.+. ...+.
T Consensus 264 vl~~g~~-~-v~~g~lt~-----g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~---~~~~~ 333 (587)
T 3qf4_A 264 VLWFGGV-L-VRNNQMEI-----GSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEE---ADNAL 333 (587)
T ss_dssp HHHHHHH-H-HHTTSSCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCC---CTTCB
T ss_pred HHHHHHH-H-HHCCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC---CCCCC
T ss_conf 9999999-9-98499389-----9999999999999999999999999999999999999999768976578---87765
Q ss_pred CCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHH
Q ss_conf 99998756899989999489999810002389639969999979999988999998404668862899989606898958
Q 001580 658 PGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLM 737 (1050)
Q Consensus 658 ~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~~GaGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~ 737 (1050)
+..+..+.|+++||+|+|++..+++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.+||.|+.+++..
T Consensus 334 ~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~~i~~~~~~ 413 (587)
T 3qf4_A 334 ALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDELDVRTVKLK 413 (587)
T ss_dssp CCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSSBGGGBCHH
T ss_pred CCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHH
T ss_conf 66888880799788998489997642111799869988999899999799999999278669986798999983407899
Q ss_pred HHHHHEEEECCCCCCCCCCHHHHCCCCCC-CCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 87521278767765566447770466999-99889999999930899998725994036302999999459999999999
Q 001580 738 DLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 738 ~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~~~~~~l~~~i~~~p~gl~t~v~e~~~~LSgGqkqrl~lAra 816 (1050)
.+|++++|+||++.+|++|++||+.++.+ .++++++++++.+++.++++.+|.|+++.+++.|.+||||||||++||||
T Consensus 414 ~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqrQrv~lARa 493 (587)
T 3qf4_A 414 DLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQKQRLSIARA 493 (587)
T ss_dssp HHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHHHHHHHHHH
T ss_pred HHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 99841389778986767559999852488999999999999968499997565312127518989929999999999999
Q ss_pred HCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHH
Q ss_conf 70399899984667488999899999999987389489985058103653198999959779984393678513898179
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFS 896 (1050)
Q Consensus 817 ll~~p~illLDEpts~lD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 896 (1050)
++++|+||+|||||++||+.+++.+.+.++++.+++|+|+||||++.+..||+|++|++|++++.|+|+|++++. +.|.
T Consensus 494 l~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~~~~-~~~~ 572 (587)
T 3qf4_A 494 LVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELLEHC-KPYR 572 (587)
T ss_dssp HHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHHHHC-HHHH
T ss_pred HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCC-CHHH
T ss_conf 972999999979754479999999999999867999899982276889819989999899899978899998678-3999
Q ss_pred HHHH
Q ss_conf 9999
Q 001580 897 KMVQ 900 (1050)
Q Consensus 897 ~~~~ 900 (1050)
+++.
T Consensus 573 ~~~~ 576 (587)
T 3qf4_A 573 EIYE 576 (587)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=593.25 Aligned_cols=546 Identities=21% Similarity=0.319 Sum_probs=401.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---CH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999898554345552243444788---82------6999999999999999999999999999999999
Q 001580 344 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH---GP------LFYNTIYSLLSFGQVLVTLANSYWLIISSLYAAK 414 (1050)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 414 (1050)
.+++.+++.++...+.+..|..+++..|....... .. ..+...+.++.+...++.+...++....+.+...
T Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (578)
T 4a82_A 15 RIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILY 94 (578)
T ss_dssp HHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999981687114677888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999998199000203694599999995498999999999999999999999999999999999999999999999
Q 001580 415 RLHDAMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLF 494 (1050)
Q Consensus 415 ~l~~~~~~~ll~~p~~~f~~~~~G~i~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~ 494 (1050)
+++..+++++++.|..||+++++|++++|+++|+..++..+...+...+..+..++..++.+..+.+...++.+..++++
T Consensus 95 ~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~l~ 174 (578)
T 4a82_A 95 DIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFY 174 (578)
T ss_dssp HHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTTHHHHTTHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999998789999768986999999999999999999999999999999999999999999699999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 9999999999999999998411626879999883399999960299999999999999999999998776799999999-
Q 001580 495 YAAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEI- 573 (1050)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 573 (1050)
+.....+.+..++..+......++..+.+.|.++|++++|+|+.++.+.+.+.+......+..........+.......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (578)
T 4a82_A 175 ILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTV 254 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999824999998166499999999999999999999999999999999999
Q ss_pred ---HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf ---99999999999999943965303567999999999999999999999999999999999999999621189999654
Q 001580 574 ---VGGLMIWLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLV 650 (1050)
Q Consensus 574 ---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~ 650 (1050)
...+++++++ +.+. .+..+. ..+..++.+...+..++..+...+........+.+|+.++++.+++.+.
T Consensus 255 ~~~~~~~v~~~g~-~~v~-~g~lt~-----g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~- 326 (578)
T 4a82_A 255 TDIGPIIVIGVGA-YLAI-SGSITV-----GTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKN- 326 (578)
T ss_dssp HHHHHHHHHHHHH-HHHH-HTSCCH-----HHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCC-
T ss_pred HHHHHHHHHHHHH-HHHH-CCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-
T ss_conf 9999999999999-9998-599589-----9999999999999999999999999999999999999999768976667-
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 57999999999875689998999948999981000238963996999997999998899999840466886289998960
Q 001580 651 IESNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFD 730 (1050)
Q Consensus 651 ~~~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~~GaGKSTll~~l~g~~~p~~G~i~~~g~~ 730 (1050)
.....+..+..+.++++||+|+|++..+++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.++|.|
T Consensus 327 --~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 404 (578)
T 4a82_A 327 --GVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHN 404 (578)
T ss_dssp --CTTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEE
T ss_pred --CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf --877666677788079999999758999741343379987999999989999859999999846788999679999998
Q ss_pred CCCCCHHHHHHHEEEECCCCCCCCCCHHHHCCCCCC-CCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHH
Q ss_conf 689895887521278767765566447770466999-9988999999993089999872599403630299999945999
Q 001580 731 IAKFGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE-HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 731 ~~~~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~-~~~~~~~~~~~~~~l~~~i~~~p~gl~t~v~e~~~~LSgGqkq 809 (1050)
+.+.+...+|++++|+||++.+|++|++||+.++.+ ..+++++++++.+++.++++++|.|++|.++++|.+|||||||
T Consensus 405 ~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~LSgGq~Q 484 (578)
T 4a82_A 405 IKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQ 484 (578)
T ss_dssp GGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHH
T ss_pred HHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCCCHHHHH
T ss_conf 44278999960068992898347645999985279998899999999880959999757330102530688967999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHH
Q ss_conf 99999997039989998466748899989999999998738948998505810365319899995977998439367851
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~lD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|++||||++++|++|+|||||++||+.+++.+.+.++++.+++|+|+||||++.+..||+|++|++|++++.|+++|+++
T Consensus 485 rv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~el~~ 564 (578)
T 4a82_A 485 RLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIA 564 (578)
T ss_dssp HHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEECHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH
T ss_conf 99999999749999999786545799999999999999808997999831789997199899998998999888999985
Q ss_pred CCCCHHHHHHH
Q ss_conf 38981799999
Q 001580 890 NEGSSFSKMVQ 900 (1050)
Q Consensus 890 ~~~~~~~~~~~ 900 (1050)
+. +.|..++.
T Consensus 565 ~~-~~~~~~~~ 574 (578)
T 4a82_A 565 KQ-GAYEHLYS 574 (578)
T ss_dssp TT-SHHHHHHT
T ss_pred CC-CHHHHHHH
T ss_conf 88-38999998
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=585.83 Aligned_cols=547 Identities=22% Similarity=0.303 Sum_probs=415.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999989855434555224344478882-6999-9999999999999999999999999999999999999
Q 001580 344 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTHGP-LFYN-TIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 421 (1050)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~-~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 421 (1050)
.+++.+++.++...+....+.++..+.|......... ..+. ..+.++.+...++.+...++....+.+...+++..++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~ 105 (582)
T 3b60_A 26 GLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLF 105 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999998843686579999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99981990002036945999999954989999999999999999999999999999999999999999999999999999
Q 001580 422 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 501 (1050)
Q Consensus 422 ~~ll~~p~~~f~~~~~G~i~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~~~~~~~~ 501 (1050)
+++++.|+.||+++++|++++|+++|+..++..+...+..++..+..++..++.++.+.|...++.+..+++++.....+
T Consensus 106 ~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~ 185 (582)
T 3b60_A 106 GHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIVSIAIRVV 185 (582)
T ss_dssp HHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99980999997889865899999987999999999999999999999999999999980999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999841162687999988339999996029999999999999999999999877679999999999999999
Q 001580 502 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIWL 581 (1050)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 581 (1050)
.+..++..+......+++.+.+.|.++|++++|+|+.++++.+.+.+..+...+..........+......++..+...+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (582)
T 3b60_A 186 SKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAF 265 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999619999983768999999999999999999999999999999999999999999
Q ss_pred HHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999--43965303567999999999999999999999999999999999999999621189999654579999999
Q 001580 582 TATFAVV--QNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPPG 659 (1050)
Q Consensus 582 ~~~~~~~--~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~~~ 659 (1050)
+..+... ..+..+ .+.+..++.+...+..++..+...+..+.....+.+|+.++++.+++.+. .. .+.
T Consensus 266 ~~~~g~~~v~~g~lt-----~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~--~~~ 335 (582)
T 3b60_A 266 VLYAASFPSVMDSLT-----AGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDE---GK--RVI 335 (582)
T ss_dssp HHHHHHSSSTTSSSH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCC---CC--BCC
T ss_pred HHHHHHHHHHCCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC---CC--CCC
T ss_conf 999999999849998-----99999999999999999999999999999999999999999759987667---77--777
Q ss_pred CCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHH
Q ss_conf 99875689998999948999981000238963996999997999998899999840466886289998960689895887
Q 001580 660 WPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMDL 739 (1050)
Q Consensus 660 ~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~~GaGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~~ 739 (1050)
++..+.++++||+|+|+++.+++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.++|.++.+.+...+
T Consensus 336 ~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~~~~~~~~~~ 415 (582)
T 3b60_A 336 DRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASL 415 (582)
T ss_dssp SCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBCHHHH
T ss_pred CCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEECCCCCHHHH
T ss_conf 78888479998899739999744156159976999899989999989999999861068989769799998230699999
Q ss_pred HHHEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 52127876776556644777046699--9998899999999308999987259940363029999994599999999997
Q 001580 740 RKILGIIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRAL 817 (1050)
Q Consensus 740 r~~i~~v~Q~~~lf~~tv~~nl~~~~--~~~~~~~~~~~~~~~l~~~i~~~p~gl~t~v~e~~~~LSgGqkqrl~lAral 817 (1050)
|++++|+||++.+|++|++||+.++. ..++++++++++.++++++++++|.|++|.+++.|.+||||||||++||||+
T Consensus 416 ~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq~qrl~iAral 495 (582)
T 3b60_A 416 RNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARAL 495 (582)
T ss_dssp HHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHHHHHHHH
T ss_pred HHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 96080880687477878999985459999899999999998497999984504114511479887899999999999999
Q ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHHH
Q ss_conf 03998999846674889998999999999873894899850581036531989999597799843936785138981799
Q 001580 818 LRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFSK 897 (1050)
Q Consensus 818 l~~p~illLDEpts~lD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~~ 897 (1050)
+++|++|+|||||++||+.+++.+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++|++++. +.|..
T Consensus 496 ~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~~~~ 574 (582)
T 3b60_A 496 LRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQH-GVYAQ 574 (582)
T ss_dssp HHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHHHHHT-SSHHH
T ss_pred HHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCC-CHHHH
T ss_conf 72899899978655579899999999999996799799994547789859989999788898845899998769-88999
Q ss_pred HHHH
Q ss_conf 9996
Q 001580 898 MVQS 901 (1050)
Q Consensus 898 ~~~~ 901 (1050)
++..
T Consensus 575 ~~~~ 578 (582)
T 3b60_A 575 LHKM 578 (582)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9997
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=585.75 Aligned_cols=545 Identities=22% Similarity=0.339 Sum_probs=412.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999898554345552243444788-826999-9999999999999999999999999999999999999
Q 001580 344 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-GPLFYN-TIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHDAML 421 (1050)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~-~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 421 (1050)
.+++.+++.++...+....+.++..+.|....... ....+. ..+.++.+...++.+...++....+.+...+++..++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~ 105 (582)
T 3b5x_A 26 GLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLF 105 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999864686679999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99981990002036945999999954989999999999999999999999999999999999999999999999999999
Q 001580 422 HSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAYLYY 501 (1050)
Q Consensus 422 ~~ll~~p~~~f~~~~~G~i~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~~~~~~~~ 501 (1050)
+++++.|+.||+++++|++++|+++|+..++..+...+..++..+..++..++.++++.+...++.+..+++++.....+
T Consensus 106 ~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~ 185 (582)
T 3b5x_A 106 NHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFV 185 (582)
T ss_pred HHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99986999997789878999999988999999999999999999999999999999982999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q ss_conf 9999999999984116268799998833999999602999999999999999999999987767999999999999999-
Q 001580 502 QSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLMIW- 580 (1050)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 580 (1050)
.+..++..+......+++.+.+.|.++|++++|+|+.++++.+.+.+..+...+..........+......++..+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (582)
T 3b5x_A 186 SKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFA 265 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999519999970875999999999999999999999999999999999999999999
Q ss_pred --HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf --999999994396530356799999999999999999999999999999999999999962118999965457999999
Q 001580 581 --LTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNRPPP 658 (1050)
Q Consensus 581 --~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~~~~ 658 (1050)
..+.+.+. .+..+ .+.+..++.+...+..++..+...+...+....+.+|+.++++.+++.+ +.. .+
T Consensus 266 i~~~g~~~v~-~g~lt-----~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~---~~~--~~ 334 (582)
T 3b5x_A 266 VLFLASVDSI-RAELT-----PGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERD---NGK--YE 334 (582)
T ss_pred HHHHHHHHHH-CCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---CCC--CC
T ss_conf 9999999998-59988-----9999999999999999999999999999999999999999975897677---777--77
Q ss_pred CCCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHH
Q ss_conf 99987568999899994899998100023896399699999799999889999984046688628999896068989588
Q 001580 659 GWPSSGSIKFEDVVLRYRPELPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAKFGLMD 738 (1050)
Q Consensus 659 ~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~~GaGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~ 738 (1050)
.++..+.++++||+|+|+++.+++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.++|.|+.+.+...
T Consensus 335 ~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~~~~~~~~~ 414 (582)
T 3b5x_A 335 AERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTN 414 (582)
T ss_pred CCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHH
T ss_conf 77788828999989972899865400416998799989998999997999999996577899987989999856388999
Q ss_pred HHHHEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf 752127876776556644777046699--999889999999930899998725994036302999999459999999999
Q 001580 739 LRKILGIIPQSPVLFSGTVRFNLDPFS--EHSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQLLSLSRA 816 (1050)
Q Consensus 739 ~r~~i~~v~Q~~~lf~~tv~~nl~~~~--~~~~~~~~~~~~~~~l~~~i~~~p~gl~t~v~e~~~~LSgGqkqrl~lAra 816 (1050)
+|++++|+||++.+|++|++||+.++. ..++++++++++.++++++++++|.|++|.+++.|.+||||||||++||||
T Consensus 415 ~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq~qr~~iAra 494 (582)
T 3b5x_A 415 LRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARA 494 (582)
T ss_pred HHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 96485898279905310299998566889999999999999879899998476533451068888479999999999999
Q ss_pred HCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCHHH
Q ss_conf 70399899984667488999899999999987389489985058103653198999959779984393678513898179
Q 001580 817 LLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLSNEGSSFS 896 (1050)
Q Consensus 817 ll~~p~illLDEpts~lD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~~~~~~~~ 896 (1050)
++++|++|+|||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|++++++++. +.|.
T Consensus 495 l~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~-~~~~ 573 (582)
T 3b5x_A 495 LLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLLAQD-GAYA 573 (582)
T ss_pred HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHCC-CHHH
T ss_conf 974999999978544689999999999999972899899993688999819989999899899977899998488-5899
Q ss_pred HHHH
Q ss_conf 9999
Q 001580 897 KMVQ 900 (1050)
Q Consensus 897 ~~~~ 900 (1050)
.++.
T Consensus 574 ~~~~ 577 (582)
T 3b5x_A 574 QLHR 577 (582)
T ss_pred HHHH
T ss_conf 9999
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=585.40 Aligned_cols=549 Identities=23% Similarity=0.312 Sum_probs=405.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-C---HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999898554345552243444788-8---26-9999999999999999999999999999999999999
Q 001580 344 VVLILLLCYFLTETLRVSSSTWLSYWTDQSSLKTH-G---PL-FYNTIYSLLSFGQVLVTLANSYWLIISSLYAAKRLHD 418 (1050)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~---~~-~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 418 (1050)
.+++.+++.++...+....|.++..+.|....... . .. .+...+.++.+...++.+...++....+.+...+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 99 (595)
T 2yl4_A 20 RLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVNRLRT 99 (595)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999973574026679999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999981990002036945999999954989999999999999999999999999999999999999999999999999
Q 001580 419 AMLHSILRAPMVFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFMGQVSQLLSTFVLIGIVSTMSLWAIMPLLLLFYAAY 498 (1050)
Q Consensus 419 ~~~~~ll~~p~~~f~~~~~G~i~~rl~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lli~~~~~~ 498 (1050)
.+++++++.|+.||+++++|++++|+++|+..++..+...+..++..+..++..++.++++.+...++++..+++++...
T Consensus 100 ~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l~~~~~ 179 (595)
T 2yl4_A 100 SLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLSVVPPVSIIA 179 (595)
T ss_dssp HHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999981999997779848899999999999999999999999999999999999999981999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999841162687999988339999996029999999999999999999999877679999999999999
Q 001580 499 LYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKSMDKNIRYTLVNMGANRWLAIRLEIVGGLM 578 (1050)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ira~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 578 (1050)
..+.+..++..+......++..+.+.|.++|++++|+|+.++++.+.+.+..+...+..........+......++..+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (595)
T 2yl4_A 180 VIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGATGLSGNLI 259 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999998119999983756999999999999999999999999999999999999999
Q ss_pred H---HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 9---9999999994396530356799999999999999999999999999999999999999962118999965457999
Q 001580 579 I---WLTATFAVVQNGSAENQEAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGNYIELPSEAPLVIESNR 655 (1050)
Q Consensus 579 ~---~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~Ri~~~~~~~~e~~~~~~~~~ 655 (1050)
. +..+.+.+ ..+..+. +.+..++.+...+..++..+...+...+....+.+|+.++++.+++.+.. ...
T Consensus 260 ~~~~~~~g~~~v-~~g~lt~-----g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~--~~~ 331 (595)
T 2yl4_A 260 VLSVLYKGGLLM-GSAHMTV-----GELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFN--EGV 331 (595)
T ss_dssp HHHHHHHHHHHH-HTTSCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCSS--CSB
T ss_pred HHHHHHHHHHHH-HCCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCC
T ss_conf 999999999999-8699789-----99999999999999999999999999999999999999998389766777--787
Q ss_pred CCCCCCCCCC-EEEEEEEEEECCC-CCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCC
Q ss_conf 9999998756-8999899994899-9981000238963996999997999998899999840466886289998960689
Q 001580 656 PPPGWPSSGS-IKFEDVVLRYRPE-LPPVLHGLSFTIPPSDKVGIVGRTGAGKSSMLNTLFRIVELERGRILIDGFDIAK 733 (1050)
Q Consensus 656 ~~~~~~~~~~-i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~~GaGKSTll~~l~g~~~p~~G~i~~~g~~~~~ 733 (1050)
.+..+..+. |+++||+|+|++. ..++|+|+||++++||++||+||||||||||+++|.|+++|++|+|.++|.++.+
T Consensus 332 -~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~i~~ 410 (595)
T 2yl4_A 332 -ILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQ 410 (595)
T ss_dssp -CCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEETTEETTT
T ss_pred -CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHHH
T ss_conf -7776789983899988998589988812011279984998899989999979999999825857898379999998111
Q ss_pred CCHHHHHHHEEEECCCCCCCCCCHHHHCCCCCC----CCHHHHHHHHHHHCHHHHHHHCCCCCCHHHHCCCCCCCHHHHH
Q ss_conf 895887521278767765566447770466999----9988999999993089999872599403630299999945999
Q 001580 734 FGLMDLRKILGIIPQSPVLFSGTVRFNLDPFSE----HSDADLWEALERAHLKDAIRRNSLGLDAQVSEAGENFSVGQRQ 809 (1050)
Q Consensus 734 ~~~~~~r~~i~~v~Q~~~lf~~tv~~nl~~~~~----~~~~~~~~~~~~~~l~~~i~~~p~gl~t~v~e~~~~LSgGqkq 809 (1050)
.+...+|++++|+||++.+|++|+++|+.++.+ .++++++++++.++++++++++|.|+++.+++.|.+|||||||
T Consensus 411 ~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~LSgGq~q 490 (595)
T 2yl4_A 411 LNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQ 490 (595)
T ss_dssp BCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCCCCHHHHH
T ss_pred CCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 79999973228983688326877999984058776656899999999986979999747320135016887868999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHH
Q ss_conf 99999997039989998466748899989999999998738948998505810365319899995977998439367851
Q 001580 810 LLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDSGRVLEYDTPEELLS 889 (1050)
Q Consensus 810 rl~lArall~~p~illLDEpts~lD~~~~~~i~~~l~~~~~~~tvi~vtH~~~~~~~~d~i~vl~~G~i~~~g~~~el~~ 889 (1050)
|++||||++++|++|+|||||++||+.+++.+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++|+++
T Consensus 491 rv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 570 (595)
T 2yl4_A 491 RIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEELLS 570 (595)
T ss_dssp HHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEECSCC---
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH
T ss_conf 99999999759999999886668998999999999999965997999946878997599899998998999788999974
Q ss_pred CCCCHHHHHHHH
Q ss_conf 389817999996
Q 001580 890 NEGSSFSKMVQS 901 (1050)
Q Consensus 890 ~~~~~~~~~~~~ 901 (1050)
+..+.|..++..
T Consensus 571 ~~~~~~~~~~~~ 582 (595)
T 2yl4_A 571 KPNGIYRKLMNK 582 (595)
T ss_dssp ---C--------
T ss_pred CCCHHHHHHHHH
T ss_conf 787299999997
Done!